LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 Gene3D G3DSA:3.20.20.120 128 300 3.3E-37 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 Pfam PF13378 Enolase C-terminal domain-like 122 279 3.1E-18 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 314 23.038 T 06-07-2017 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 6.5E-125 T 06-07-2017 LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 SMART SM00922 114 209 3.8E-13 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 Gene3D G3DSA:3.30.390.10 1 127 5.9E-46 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 SUPERFAMILY SSF54826 1 96 1.88E-27 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS07735 c2785e4f9c01acb130abd15ce4ab4637 320 SUPERFAMILY SSF51604 106 299 1.97E-51 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS10130 06904b9f9db51fade4158a3431db3f4e 154 Pfam PF13239 2TM domain 75 148 3.0E-12 T 06-07-2017 IPR025698 2TM domain LFZ55_RS10130 06904b9f9db51fade4158a3431db3f4e 154 Pfam PF01381 Helix-turn-helix 5 58 1.2E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS10130 06904b9f9db51fade4158a3431db3f4e 154 Gene3D G3DSA:1.10.260.40 3 85 3.8E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS10130 06904b9f9db51fade4158a3431db3f4e 154 SMART SM00530 4 58 4.0E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS10130 06904b9f9db51fade4158a3431db3f4e 154 SUPERFAMILY SSF47413 3 61 7.88E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Gene3D G3DSA:2.30.220.10 195 257 1.1E-18 T 06-07-2017 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Gene3D G3DSA:2.170.280.10 280 405 3.5E-39 T 06-07-2017 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Gene3D G3DSA:1.20.1330.10 54 170 1.0E-60 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Gene3D G3DSA:1.20.1330.10 406 457 1.0E-60 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 3.2E-44 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 PRINTS PR00207 Flagellin signature 37 54 5.3E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 PRINTS PR00207 Flagellin signature 111 134 5.3E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 PRINTS PR00207 Flagellin signature 76 95 5.3E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Pfam PF00700 Bacterial flagellin C-terminal helical region 415 500 2.7E-31 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 Pfam PF08884 Flagellin D3 domain 194 282 3.1E-20 T 06-07-2017 IPR014981 Flagellin D3 LFZ55_RS09630 b8ce9f292154be510aee2eabbbcc78b0 501 SUPERFAMILY SSF64518 1 501 1.83E-123 T 06-07-2017 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 Gene3D G3DSA:3.30.1440.10 2 179 9.3E-81 T 06-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 06-07-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 SUPERFAMILY SSF55282 4 179 1.88E-79 T 06-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 PIRSF PIRSF002161 1 179 1.7E-66 T 06-07-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.0E-41 T 06-07-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 06-07-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02100 dd56b1a1b3dec92037ad5913650793f9 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 06-07-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 SUPERFAMILY SSF52540 352 608 5.05E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 SUPERFAMILY SSF52540 93 301 5.05E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 Gene3D G3DSA:3.40.50.300 398 609 5.6E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 Gene3D G3DSA:3.40.50.300 118 221 5.6E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 123 608 4.0E-254 T 06-07-2017 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 139 187 4.6E-5 T 06-07-2017 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 608 4.5E-236 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD LFZ55_RS20950 06cc8ba2ea7252c8946e007c4ac6fd90 677 Pfam PF12696 TraM recognition site of TraD and TraG 461 587 2.7E-12 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 8.6E-94 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 SUPERFAMILY SSF51713 1 364 8.24E-164 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 3.6E-181 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 2.0E-191 T 06-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.772 T 06-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS18405 d13184fc9aa7671b4d9ca4eb65b791ae 375 Gene3D G3DSA:3.20.20.105 1 367 9.3E-171 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 LFZ55_RS21385 44555f571ad0f51622e0d36eff0ef0ad 100 Pfam PF14189 Domain of unknown function (DUF4312) 6 89 1.5E-35 T 06-07-2017 IPR020037 Protein of unknown function DUF4312 LFZ55_RS21385 44555f571ad0f51622e0d36eff0ef0ad 100 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 3 97 7.1E-44 T 06-07-2017 IPR020037 Protein of unknown function DUF4312 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 Gene3D G3DSA:1.10.1040.10 181 433 6.6E-118 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 SUPERFAMILY SSF48179 177 467 1.75E-130 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 4.8E-131 T 06-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 SMART SM01350 179 467 6.0E-221 T 06-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 Gene3D G3DSA:1.20.5.320 436 467 1.8E-22 T 06-07-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 Gene3D G3DSA:3.40.50.720 1 180 1.8E-61 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 SUPERFAMILY SSF51735 4 173 2.5E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 06-07-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 PIRSF PIRSF000109 1 468 2.4E-241 T 06-07-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 1.2E-51 T 06-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LFZ55_RS08835 b26b3c15c5912998a0849d86269b3a2a 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 7.3E-230 T 06-07-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LFZ55_RS12940 50864fa0975e4cf1df801c07ba770e90 206 SMART SM00900 99 191 8.8E-36 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LFZ55_RS12940 50864fa0975e4cf1df801c07ba770e90 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 27.086 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LFZ55_RS12940 50864fa0975e4cf1df801c07ba770e90 206 Pfam PF04205 FMN-binding domain 99 187 1.9E-19 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LFZ55_RS12940 50864fa0975e4cf1df801c07ba770e90 206 PIRSF PIRSF006091 1 202 2.2E-70 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LFZ55_RS12940 50864fa0975e4cf1df801c07ba770e90 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 2.6E-68 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 Gene3D G3DSA:3.40.640.10 504 778 3.3E-43 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 Gene3D G3DSA:3.40.640.10 93 305 1.7E-15 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 Pfam PF02347 Glycine cleavage system P-protein 481 739 1.3E-8 T 06-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 9.7E-192 T 06-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 SUPERFAMILY SSF53383 17 440 3.02E-97 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.604 T 06-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 06-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 SUPERFAMILY SSF53383 929 951 3.75E-101 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS04100 8d47b50f84588b0cc8e5ef8c71f3afe6 957 SUPERFAMILY SSF53383 481 889 3.75E-101 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Gene3D G3DSA:3.40.50.300 207 358 1.9E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Pfam PF00270 DEAD/DEAH box helicase 34 175 3.6E-9 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Pfam PF08482 ATP-dependent helicase C-terminal 679 811 5.2E-53 T 06-07-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 SUPERFAMILY SSF52540 32 353 8.23E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 SMART SM00487 14 201 1.1E-17 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 PIRSF PIRSF005496 15 824 0.0 T 06-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Gene3D G3DSA:3.40.50.300 18 175 1.1E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Pfam PF04408 Helicase associated domain (HA2) 404 459 2.5E-8 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 SMART SM00847 403 491 3.3E-9 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 Pfam PF00271 Helicase conserved C-terminal domain 220 342 4.5E-9 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 19 823 0.0 T 06-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LFZ55_RS19420 3386ff1ea81da0b306a2381b0b186a39 824 SMART SM00490 241 343 6.1E-14 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS03350 cfb9e204a9cdc2af7ae2afb18e89aac3 104 Gene3D G3DSA:3.30.70.900 1 101 2.4E-39 T 06-07-2017 LFZ55_RS03350 cfb9e204a9cdc2af7ae2afb18e89aac3 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 86 3.6E-26 T 06-07-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain LFZ55_RS03350 cfb9e204a9cdc2af7ae2afb18e89aac3 104 SUPERFAMILY SSF54909 1 99 8.82E-30 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 SUPERFAMILY SSF46689 59 106 4.93E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 SUPERFAMILY SSF46689 7 57 6.27E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 Pfam PF06445 GyrI-like small molecule binding domain 199 285 4.0E-9 T 06-07-2017 IPR029442 GyrI-like small molecule binding domain LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 SUPERFAMILY SSF55136 202 285 2.79E-16 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 Gene3D G3DSA:1.10.10.60 59 113 2.6E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 Gene3D G3DSA:1.10.10.60 5 58 7.7E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 Gene3D G3DSA:3.20.80.10 129 286 1.4E-27 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 Pfam PF12833 Helix-turn-helix domain 28 106 1.6E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 SMART SM00342 22 105 3.5E-26 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 6.3E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS04290 b8f2817b314725cb99761668e34cfd92 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 6.3E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 Pfam PF00994 Probable molybdopterin binding domain 8 147 1.6E-28 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 06-07-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 3.5E-40 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 SUPERFAMILY SSF53218 3 188 1.06E-46 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 SMART SM00852 7 153 7.0E-23 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS20285 a264875b3eee7daf44311f3ae410e9b5 196 Gene3D G3DSA:3.40.980.10 2 187 5.6E-52 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.2E-151 T 06-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Gene3D G3DSA:2.40.33.10 73 168 1.7E-32 T 06-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 06-07-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 SUPERFAMILY SSF52935 323 469 7.85E-36 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 SUPERFAMILY SSF51621 1 74 3.49E-100 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 SUPERFAMILY SSF51621 156 338 3.49E-100 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Gene3D G3DSA:3.20.20.60 169 325 5.0E-116 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Gene3D G3DSA:3.20.20.60 2 72 5.0E-116 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 5.4E-191 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.0E-29 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.0E-77 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 SUPERFAMILY SSF50800 70 166 2.09E-29 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain LFZ55_RS13335 d9cbcc8be66771ee2af278600ff371ea 470 Gene3D G3DSA:3.40.1380.20 326 469 1.8E-47 T 06-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 SUPERFAMILY SSF53383 10 382 1.01E-114 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 7 385 69.384 T 06-07-2017 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 PIRSF PIRSF000390 6 385 6.9E-112 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 Gene3D G3DSA:3.40.640.10 10 257 5.0E-88 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 379 7.7E-131 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LFZ55_RS07780 610a031dc5835e7103ce124c641e8097 385 Gene3D G3DSA:3.90.1150.10 259 384 5.8E-42 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS22000 916e23b7263301957e60b47a0caa1e90 94 Gene3D G3DSA:1.10.10.60 7 88 1.3E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22000 916e23b7263301957e60b47a0caa1e90 94 SUPERFAMILY SSF46689 1 92 2.69E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22000 916e23b7263301957e60b47a0caa1e90 94 Pfam PF01527 Transposase 4 72 6.5E-15 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 SUPERFAMILY SSF53328 5 207 6.54E-66 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 SUPERFAMILY SSF50486 208 309 1.08E-36 T 06-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 Pfam PF00551 Formyl transferase 6 183 5.2E-55 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 Gene3D G3DSA:3.10.25.10 210 306 1.9E-37 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.234 T 06-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 Gene3D G3DSA:3.40.50.170 4 208 3.4E-72 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 06-07-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 5.4E-31 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS02205 1c63725b7572c6b6c4d314679c5d4084 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 2.0E-121 T 06-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Pfam PF00384 Molybdopterin oxidoreductase 56 517 3.8E-111 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Gene3D G3DSA:3.40.50.740 365 460 6.5E-45 T 06-07-2017 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Gene3D G3DSA:3.40.50.740 48 150 6.5E-45 T 06-07-2017 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Gene3D G3DSA:3.90.55.10 461 566 5.7E-33 T 06-07-2017 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Pfam PF01568 Molydopterin dinucleotide binding domain 637 740 7.6E-24 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 SUPERFAMILY SSF50692 630 774 1.13E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Gene3D G3DSA:3.40.228.10 155 364 1.6E-61 T 06-07-2017 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 Gene3D G3DSA:2.40.40.20 612 770 4.6E-55 T 06-07-2017 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 06-07-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 LFZ55_RS00990 f51fab090b1636f5a241aeca0e116628 777 SUPERFAMILY SSF53706 14 628 1.3E-157 T 06-07-2017 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.6E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.6E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.6E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.6E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 SMART SM00304 158 210 4.8E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 Gene3D G3DSA:3.30.565.10 276 425 6.9E-34 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 SUPERFAMILY SSF55874 261 423 3.01E-35 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 SUPERFAMILY SSF47384 194 271 1.71E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.4E-7 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 Pfam PF00672 HAMP domain 152 206 3.6E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 Gene3D G3DSA:1.10.287.130 201 267 2.6E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 SMART SM00388 211 271 7.3E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 1.6E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS12850 e52eeb981c693c71a30f040af9385af2 433 SMART SM00387 315 425 6.7E-32 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06070 f5f64164710a539e3cb378be271f5ea3 254 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 23 229 2.0E-100 T 06-07-2017 LFZ55_RS06070 f5f64164710a539e3cb378be271f5ea3 254 Pfam PF13942 YfhG lipoprotein 55 227 6.6E-74 T 06-07-2017 IPR025262 Quorum-sensing regulator protein G LFZ55_RS02215 5f0a071e9a3116b2f92e6e6a2ede335a 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 283 4.8E-83 T 06-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 LFZ55_RS02215 5f0a071e9a3116b2f92e6e6a2ede335a 374 Pfam PF02481 DNA recombination-mediator protein A 70 274 5.9E-72 T 06-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 LFZ55_RS02215 5f0a071e9a3116b2f92e6e6a2ede335a 374 SUPERFAMILY SSF102405 77 283 5.19E-40 T 06-07-2017 LFZ55_RS02215 5f0a071e9a3116b2f92e6e6a2ede335a 374 Gene3D G3DSA:3.40.50.450 111 252 9.0E-9 T 06-07-2017 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 SUPERFAMILY SSF46785 3 77 1.45E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 Gene3D G3DSA:1.10.10.10 2 77 8.6E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 Gene3D G3DSA:3.30.1360.40 80 154 3.8E-27 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.2E-22 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 4.8E-24 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 4.8E-24 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 4.8E-24 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 4.8E-24 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.261 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 7.2E-25 T 06-07-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 4.0E-31 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 SUPERFAMILY SSF55252 82 151 2.88E-19 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS02455 6909765d370285e10099c5a044cb5128 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 2.5E-47 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 64.962 T 06-07-2017 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 SUPERFAMILY SSF53067 1 300 6.49E-59 T 06-07-2017 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 Pfam PF00480 ROK family 2 300 3.7E-68 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 Gene3D G3DSA:3.30.420.40 133 278 5.1E-47 T 06-07-2017 LFZ55_RS14165 d822c913febfafec98494f4e946b9c67 303 Gene3D G3DSA:3.30.420.40 1 132 1.2E-42 T 06-07-2017 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 252 269 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 283 302 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 155 177 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 100 122 3.6E-64 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 Gene3D G3DSA:2.40.160.10 23 372 1.9E-101 T 06-07-2017 IPR023614 Porin domain LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 SUPERFAMILY SSF56935 23 372 2.33E-79 T 06-07-2017 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 246 258 2.5E-14 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 2.5E-14 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 327 344 2.5E-14 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 100 110 2.5E-14 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 2.5E-14 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 Pfam PF00267 Gram-negative porin 28 372 3.1E-132 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12510 8606448a61c6d406269f754e6c58bdb2 372 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 327 343 - T 06-07-2017 IPR013793 Porin, Gram-negative type, conserved site LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 43.08 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 SUPERFAMILY SSF53335 20 242 4.45E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 PIRSF PIRSF006325 1 243 9.1E-135 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 Pfam PF13649 Methyltransferase domain 60 158 3.2E-14 T 06-07-2017 LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 Gene3D G3DSA:3.40.50.150 19 241 1.6E-64 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09910 948cdd3f014b8fa4499617c6805c58f4 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 2.5E-133 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 LFZ55_RS18705 688960b1e158608e6341163f76930a8a 178 Pfam PF00419 Fimbrial protein 28 178 7.1E-15 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18705 688960b1e158608e6341163f76930a8a 178 Gene3D G3DSA:2.60.40.1090 27 178 7.3E-27 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18705 688960b1e158608e6341163f76930a8a 178 SUPERFAMILY SSF49401 27 178 5.47E-26 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.522 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 Gene3D G3DSA:3.90.1150.10 10 60 4.5E-35 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 Gene3D G3DSA:3.90.1150.10 307 401 4.5E-35 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 Pfam PF00202 Aminotransferase class-III 25 400 7.3E-139 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 Gene3D G3DSA:3.40.640.10 61 303 4.6E-92 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.8E-204 T 06-07-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 SUPERFAMILY SSF53383 11 402 1.65E-126 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS01845 9b04743887f5fe8f594e2305281a0453 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 3.3E-151 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LFZ55_RS14555 7a5f991a7fc61d110e0e81a6d03c4e75 151 Pfam PF07012 Curlin associated repeat 67 96 3.9E-5 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS14555 7a5f991a7fc61d110e0e81a6d03c4e75 151 Pfam PF07012 Curlin associated repeat 86 119 2.7E-8 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS14555 7a5f991a7fc61d110e0e81a6d03c4e75 151 Pfam PF07012 Curlin associated repeat 110 141 3.4E-6 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS14555 7a5f991a7fc61d110e0e81a6d03c4e75 151 Pfam PF07012 Curlin associated repeat 40 74 3.2E-6 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Pfam PF00072 Response regulator receiver domain 6 115 1.2E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 SUPERFAMILY SSF52172 6 185 2.28E-48 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.9E-15 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Pfam PF00158 Sigma-54 interaction domain 140 307 6.3E-70 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 9.2E-247 T 06-07-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 SUPERFAMILY SSF46689 380 469 1.76E-24 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Gene3D G3DSA:1.10.8.60 313 391 2.1E-24 T 06-07-2017 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 SMART SM00382 160 311 9.6E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 SUPERFAMILY SSF52540 139 382 1.29E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 SMART SM00448 4 115 3.5E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Gene3D G3DSA:3.40.50.300 138 312 1.1E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Gene3D G3DSA:3.40.50.2300 6 133 3.4E-39 T 06-07-2017 LFZ55_RS23420 70bec671f3b2517951d6b94ba661797c 469 Gene3D G3DSA:1.10.10.60 399 469 4.0E-24 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Pfam PF00271 Helicase conserved C-terminal domain 434 545 1.2E-18 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SUPERFAMILY SSF52540 3 415 1.16E-138 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SUPERFAMILY SSF46600 626 669 5.1E-12 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 06-07-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 06-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Pfam PF02151 UvrB/uvrC motif 634 667 7.6E-7 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:3.40.50.300 419 582 3.2E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:3.30.2060.10 159 231 5.4E-11 T 06-07-2017 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SUPERFAMILY SSF52540 459 581 5.09E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SUPERFAMILY SSF52540 37 82 5.09E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 5.3E-9 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SMART SM00487 9 425 5.2E-28 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 SMART SM00490 460 546 3.8E-20 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.319 T 06-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:4.10.860.10 628 671 1.2E-19 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:3.40.50.300 278 338 1.4E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:3.40.50.300 388 408 1.4E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16610 029854635ebf2a91c7dc52b204edaebb 673 Gene3D G3DSA:3.40.50.300 5 89 1.4E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Gene3D G3DSA:3.90.1150.10 426 586 1.4E-65 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 SUPERFAMILY SSF53383 130 562 3.07E-100 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 SUPERFAMILY SSF55904 567 707 1.83E-43 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Gene3D G3DSA:3.90.100.10 587 710 1.5E-38 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-27 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Gene3D G3DSA:3.40.640.10 130 423 2.6E-99 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 544 2.9E-191 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 PIRSF PIRSF009393 1 712 6.2E-278 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 7.1E-47 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS19220 6ebc6d3ae3cec33650032393851bba11 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Pfam PF00689 Cation transporting ATPase, C-terminus 731 899 1.5E-16 T 06-07-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 18 907 0.0 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Pfam PF00122 E1-E2 ATPase 120 368 4.4E-54 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 617 737 6.7E-30 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 274 411 2.3E-19 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 756 769 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 811 832 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 307 326 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 724 735 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 411 424 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 776 792 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 861 882 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 706 721 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 PRINTS PR01836 Magnesium-transporting ATPase signature 290 306 1.4E-89 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF81653 166 277 8.5E-26 T 06-07-2017 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Gene3D G3DSA:3.40.1110.10 369 555 2.6E-30 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF81665 278 371 1.57E-100 T 06-07-2017 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF81665 32 152 1.57E-100 T 06-07-2017 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF81665 697 905 1.57E-100 T 06-07-2017 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 34 98 1.8E-17 T 06-07-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Gene3D G3DSA:1.20.1110.10 617 899 5.8E-67 T 06-07-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Gene3D G3DSA:1.20.1110.10 83 146 5.8E-67 T 06-07-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SMART SM00831 30 103 4.3E-21 T 06-07-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF56784 375 395 9.89E-36 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 SUPERFAMILY SSF56784 502 747 9.89E-36 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 373 662 3.9E-18 T 06-07-2017 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Gene3D G3DSA:2.70.150.10 46 82 6.0E-37 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 Gene3D G3DSA:2.70.150.10 147 278 6.0E-37 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS00355 7c86832e55cee4d7d24910f4c220c6cc 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 379 385 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LFZ55_RS04115 078be615a712302498c81428f0e98e51 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.5E-71 T 06-07-2017 IPR005744 Hly-III GO:0016021|GO:0019835 LFZ55_RS04115 078be615a712302498c81428f0e98e51 219 Pfam PF03006 Haemolysin-III related 12 209 6.0E-37 T 06-07-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LFZ55_RS19245 5fae48b5fc58923098ab290b547d6366 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 9.6E-189 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS19245 5fae48b5fc58923098ab290b547d6366 382 Gene3D G3DSA:3.40.50.2000 172 357 2.3E-6 T 06-07-2017 LFZ55_RS19245 5fae48b5fc58923098ab290b547d6366 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.56 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS19245 5fae48b5fc58923098ab290b547d6366 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 5.5E-156 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS19245 5fae48b5fc58923098ab290b547d6366 382 SUPERFAMILY SSF53756 9 379 4.19E-30 T 06-07-2017 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 4.1E-92 T 06-07-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 SUPERFAMILY SSF53681 24 125 1.9E-30 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 06-07-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 Gene3D G3DSA:3.40.50.1860 22 191 1.0E-48 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 SUPERFAMILY SSF53681 127 279 1.44E-33 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 7.4E-24 T 06-07-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.775 T 06-07-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22910 9e30ed7f2ae37a7c797397317cdb80b8 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 06-07-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 PIRSF PIRSF004669 1 87 7.6E-25 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 Pfam PF01313 Bacterial export proteins, family 3 7 78 2.2E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS13125 0e901b06f96782447eba9bc66d448983 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 2.1E-33 T 06-07-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 Gene3D G3DSA:3.40.50.700 49 226 2.0E-57 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 3.2E-29 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PIRSF PIRSF000310 5 358 6.6E-143 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 356 8.8E-173 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 SUPERFAMILY SSF56770 46 309 1.16E-89 T 06-07-2017 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 Gene3D G3DSA:4.10.480.10 227 310 1.7E-39 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.1E-118 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 43 7.5E-5 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS12465 17b36fab61d04805984eab9f991edfbf 367 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 307 6.3E-32 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 222 6.5E-58 T 06-07-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 88 - T 06-07-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 Gene3D G3DSA:3.40.50.1860 3 113 1.0E-38 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 189 199 - T 06-07-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 223 4.1E-47 T 06-07-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 SUPERFAMILY SSF53681 4 112 8.34E-32 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 Gene3D G3DSA:3.40.50.1860 114 214 3.7E-28 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS20690 f12b346bbb0cf148836c730945171a9d 244 SUPERFAMILY SSF53681 117 226 3.01E-26 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.4E-48 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 PIRSF PIRSF003230 1 134 3.2E-48 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 8.6E-51 T 06-07-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 Gene3D G3DSA:3.10.129.10 2 133 6.3E-48 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 SUPERFAMILY SSF54637 2 133 1.61E-39 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 06-07-2017 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 LFZ55_RS16865 7dd2533f840596771baf3fa9d2aea9d0 134 Pfam PF03061 Thioesterase superfamily 20 103 4.9E-17 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Gene3D G3DSA:1.10.3810.10 63 239 9.2E-77 T 06-07-2017 LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 791 6.9E-176 T 06-07-2017 LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Gene3D G3DSA:2.40.50.140 355 429 6.1E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 SUPERFAMILY SSF53955 51 265 1.52E-81 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Pfam PF00912 Transglycosylase 63 237 3.4E-65 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Gene3D G3DSA:3.40.710.10 240 321 2.2E-133 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Gene3D G3DSA:3.40.710.10 681 839 2.2E-133 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Gene3D G3DSA:3.40.710.10 430 619 2.2E-133 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 SUPERFAMILY SSF56601 430 618 1.03E-112 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 SUPERFAMILY SSF56601 219 241 1.03E-112 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 SUPERFAMILY SSF56601 680 840 1.03E-112 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 SUPERFAMILY SSF56601 270 321 1.03E-112 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Pfam PF17092 Penicillin-binding protein OB-like domain 324 433 1.1E-31 T 06-07-2017 IPR031376 Penicillin-binding protein, OB-like domain LFZ55_RS01720 6c91ce80effc854e4f63c381ddedaa21 858 Pfam PF00905 Penicillin binding protein transpeptidase domain 437 614 1.8E-24 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 9.3E-25 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 06-07-2017 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 SUPERFAMILY SSF56300 19 353 5.35E-87 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 8.9E-13 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 Gene3D G3DSA:3.90.780.10 360 596 2.0E-45 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 SUPERFAMILY SSF55816 355 597 8.89E-39 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 Gene3D G3DSA:3.60.21.10 12 359 5.5E-96 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 243 266 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 428 451 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 22 40 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 530 549 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 283 303 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21525 8596415e42391ba950260ba9d96f067c 647 PRINTS PR01607 Apyrase family signature 215 232 4.9E-32 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 332 346 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 3.2E-20 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 Pfam PF01270 Glycosyl hydrolases family 8 4 347 1.0E-126 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 115 133 - T 06-07-2017 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 SUPERFAMILY SSF48208 7 352 3.45E-102 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS01110 0d13b454cd37d1b510740276da06ff00 369 Gene3D G3DSA:1.50.10.10 2 356 2.2E-96 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 SUPERFAMILY SSF51905 261 349 1.98E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 SUPERFAMILY SSF51905 14 164 1.98E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 Gene3D G3DSA:3.50.50.60 14 169 1.6E-30 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 Gene3D G3DSA:3.50.50.60 261 345 1.6E-30 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 SUPERFAMILY SSF54373 168 266 9.81E-15 T 06-07-2017 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 339 7.4E-9 T 06-07-2017 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 7.4E-9 T 06-07-2017 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 7.4E-9 T 06-07-2017 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 7.4E-9 T 06-07-2017 LFZ55_RS08390 f869be73e100efb7537a5858abf56c71 386 Pfam PF01494 FAD binding domain 14 335 1.1E-19 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 6.6E-92 T 06-07-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 06-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.894 T 06-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 06-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 Gene3D G3DSA:3.20.20.70 1 335 5.1E-124 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 8.8E-164 T 06-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 PIRSF PIRSF000164 12 336 1.4E-95 T 06-07-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 LFZ55_RS15610 d7b80ed0e9fddf135670f7b639d525aa 336 SUPERFAMILY SSF51395 1 334 4.4E-103 T 06-07-2017 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 355 1.4E-46 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 SMART SM00283 109 356 1.3E-67 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 236 265 2.1E-43 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 130 159 2.1E-43 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 207 234 2.1E-43 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.1E-43 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 SUPERFAMILY SSF58104 76 357 4.71E-58 T 06-07-2017 LFZ55_RS11595 ea0105e32b023e48a43d759bdde2b6ff 385 Gene3D G3DSA:1.10.287.950 125 327 1.6E-49 T 06-07-2017 LFZ55_RS00710 86ab099a07a2da2b01afd8b34fc4b178 344 Pfam PF00535 Glycosyl transferase family 2 9 136 1.2E-32 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS00710 86ab099a07a2da2b01afd8b34fc4b178 344 SUPERFAMILY SSF53448 7 224 1.41E-51 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS00710 86ab099a07a2da2b01afd8b34fc4b178 344 Gene3D G3DSA:3.90.550.10 4 208 1.0E-53 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 Gene3D G3DSA:3.40.190.10 184 262 1.5E-21 T 06-07-2017 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 Gene3D G3DSA:3.40.190.10 92 183 2.0E-19 T 06-07-2017 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 SUPERFAMILY SSF53850 93 298 4.96E-41 T 06-07-2017 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 SUPERFAMILY SSF46785 4 114 1.09E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 Pfam PF03466 LysR substrate binding domain 92 294 1.4E-41 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 Gene3D G3DSA:1.10.10.10 4 82 1.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.5E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.5E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.5E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04350 90d2ada823bf471c8fc3a9fc18b11493 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.8E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 SUPERFAMILY SSF50249 2 63 5.71E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.449 T 06-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Gene3D G3DSA:2.40.50.140 2 64 8.8E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 SUPERFAMILY SSF47781 66 137 6.04E-22 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 2.1E-72 T 06-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Pfam PF07499 RuvA, C-terminal domain 159 201 7.7E-15 T 06-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Pfam PF01330 RuvA N terminal domain 2 62 1.4E-19 T 06-07-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Gene3D G3DSA:1.10.8.10 157 200 4.6E-23 T 06-07-2017 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Gene3D G3DSA:1.10.150.20 67 138 1.2E-31 T 06-07-2017 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.4E-17 T 06-07-2017 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 SUPERFAMILY SSF46929 157 201 1.44E-10 T 06-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 SMART SM00278 73 92 1.3 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS09950 a66c93e1d03efc27dfae84aac985bc45 203 SMART SM00278 108 127 0.053 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 SUPERFAMILY SSF52402 3 144 1.0E-30 T 06-07-2017 LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 Gene3D G3DSA:3.40.50.620 3 144 3.5E-35 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 Pfam PF00582 Universal stress protein family 1 144 9.4E-30 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 PRINTS PR01438 Universal stress protein signature 105 117 5.8E-10 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 PRINTS PR01438 Universal stress protein signature 2 20 5.8E-10 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS11645 858b6973fafc344bee68a0d1958cd567 144 PRINTS PR01438 Universal stress protein signature 122 144 5.8E-10 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Gene3D G3DSA:2.40.50.140 130 187 3.6E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Gene3D G3DSA:2.40.50.140 66 129 4.5E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Gene3D G3DSA:2.30.30.30 2 64 4.0E-26 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 6.4E-24 T 06-07-2017 IPR013185 Translation elongation factor, KOW-like LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.1E-76 T 06-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 SUPERFAMILY SSF50249 70 128 2.31E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.935 T 06-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 SUPERFAMILY SSF50104 3 63 1.14E-17 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 06-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 PIRSF PIRSF005901 2 188 1.2E-66 T 06-07-2017 IPR020599 Translation elongation factor P/YeiP LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-26 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 9.7E-23 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 SMART SM00841 131 186 6.9E-33 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LFZ55_RS21855 e9a847ae5c8b7dcef77032adab7ae248 188 SMART SM01185 69 123 1.6E-26 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 SUPERFAMILY SSF51735 145 306 1.23E-31 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 139 3.1E-26 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 Pfam PF00107 Zinc-binding dehydrogenase 180 304 4.1E-24 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 Gene3D G3DSA:3.90.180.10 8 171 8.4E-37 T 06-07-2017 IPR011032 GroES-like LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 Gene3D G3DSA:3.40.50.720 172 290 1.3E-31 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21175 f97cec48bf61f6b18676c589a357535b 343 SUPERFAMILY SSF50129 10 176 3.3E-37 T 06-07-2017 IPR011032 GroES-like LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 SUPERFAMILY SSF46689 1 68 4.09E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.7E-20 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 3.1E-50 T 06-07-2017 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.7E-13 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.7E-13 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 Gene3D G3DSA:1.10.10.60 6 44 9.4E-22 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 SUPERFAMILY SSF48498 84 200 4.45E-12 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 Gene3D G3DSA:1.10.357.10 63 206 4.1E-17 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 Gene3D G3DSA:1.10.10.60 45 62 1.5E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18075 55046ce3006e5af67bc4625e04b60a95 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LFZ55_RS14105 cd7eaedf98a50ec931cc2e6bd3e14a84 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 2.0E-97 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 LFZ55_RS14105 cd7eaedf98a50ec931cc2e6bd3e14a84 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.218 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 LFZ55_RS14105 cd7eaedf98a50ec931cc2e6bd3e14a84 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 4.8E-74 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 LFZ55_RS14105 cd7eaedf98a50ec931cc2e6bd3e14a84 213 SUPERFAMILY SSF101322 2 210 1.31E-80 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 LFZ55_RS14105 cd7eaedf98a50ec931cc2e6bd3e14a84 213 Gene3D G3DSA:1.10.3890.10 2 209 1.3E-87 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Gene3D G3DSA:3.10.150.10 1 121 6.0E-33 T 06-07-2017 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 SMART SM00480 17 362 2.9E-173 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Gene3D G3DSA:3.10.150.10 249 366 8.6E-39 T 06-07-2017 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.1E-41 T 06-07-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 8.7E-45 T 06-07-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Gene3D G3DSA:3.10.150.10 122 248 3.5E-39 T 06-07-2017 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 SUPERFAMILY SSF55979 245 366 1.26E-37 T 06-07-2017 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 SUPERFAMILY SSF55979 125 244 2.37E-30 T 06-07-2017 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.9E-114 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.7E-40 T 06-07-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 PIRSF PIRSF000804 1 366 2.3E-118 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS00010 4f99007993a407e08c8cd3bc67c74db5 366 SUPERFAMILY SSF55979 1 118 3.45E-27 T 06-07-2017 LFZ55_RS15105 937660b756c4931f54941b1f0c56b519 350 Gene3D G3DSA:2.60.40.1090 208 350 4.8E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS15105 937660b756c4931f54941b1f0c56b519 350 Pfam PF00419 Fimbrial protein 205 350 1.2E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS15105 937660b756c4931f54941b1f0c56b519 350 Gene3D G3DSA:2.60.40.1410 85 203 3.6E-5 T 06-07-2017 IPR015303 Fimbrial adhesin F17-AG, lectin domain GO:0009289|GO:0044406 LFZ55_RS15105 937660b756c4931f54941b1f0c56b519 350 SUPERFAMILY SSF49401 208 350 1.28E-15 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 SMART SM00861 355 525 2.1E-66 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 6.1E-173 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 SUPERFAMILY SSF52518 5 330 5.09E-122 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.1E-19 T 06-07-2017 IPR033248 Transketolase, C-terminal domain LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 06-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.8E-44 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Gene3D G3DSA:3.40.50.920 538 663 4.7E-52 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Gene3D G3DSA:3.40.50.970 327 533 2.0E-80 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 SUPERFAMILY SSF52922 533 663 1.7E-43 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 06-07-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 Gene3D G3DSA:3.40.50.970 4 320 1.7E-134 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS03910 a2a58b10f2b4d8460a9c1122d97e674f 663 SUPERFAMILY SSF52518 337 526 1.68E-67 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 SUPERFAMILY SSF64263 1 118 3.53E-51 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02170 5570f7f183ec92da3d453fe59dfdc07f 128 Gene3D G3DSA:3.90.1030.10 1 117 2.5E-51 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Gene3D G3DSA:1.10.10.10 2 88 5.5E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Gene3D G3DSA:3.40.190.10 182 279 2.7E-28 T 06-07-2017 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.3E-12 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 SUPERFAMILY SSF46785 7 87 5.75E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 83.899 T 06-07-2017 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Pfam PF03466 LysR substrate binding domain 114 314 2.9E-14 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 SUPERFAMILY SSF53850 98 312 4.95E-25 T 06-07-2017 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Gene3D G3DSA:3.40.190.10 290 318 1.7E-15 T 06-07-2017 LFZ55_RS24155 260e33e6567f6f4f4f90dc5dd6df647b 319 Gene3D G3DSA:3.40.190.10 98 181 1.7E-15 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 SUPERFAMILY SSF53633 5 301 1.31E-78 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 207 222 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 258 273 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 4.3E-63 T 06-07-2017 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 Pfam PF00696 Amino acid kinase family 6 276 2.8E-28 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 PIRSF PIRSF000723 3 303 1.4E-114 T 06-07-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 Gene3D G3DSA:3.40.1160.10 4 302 8.5E-100 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS21270 b027a7d4144d412ab9a1a12d7e6e6adb 310 TIGRFAM TIGR00746 arcC: carbamate kinase 6 301 1.2E-116 T 06-07-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 LFZ55_RS06370 4d36dfb1b26ad5bdbb89b46097716699 198 SUPERFAMILY SSF47413 104 159 6.52E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06370 4d36dfb1b26ad5bdbb89b46097716699 198 SUPERFAMILY SSF47413 14 79 9.78E-5 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06370 4d36dfb1b26ad5bdbb89b46097716699 198 Gene3D G3DSA:1.10.260.40 14 77 6.2E-4 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06370 4d36dfb1b26ad5bdbb89b46097716699 198 Gene3D G3DSA:1.10.260.40 112 152 2.5E-4 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06370 4d36dfb1b26ad5bdbb89b46097716699 198 Pfam PF01381 Helix-turn-helix 104 150 1.6E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS00300 eddc971605721864e1578923df278513 463 Pfam PF07690 Major Facilitator Superfamily 35 397 4.1E-34 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00300 eddc971605721864e1578923df278513 463 SUPERFAMILY SSF103473 20 451 1.01E-58 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00300 eddc971605721864e1578923df278513 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 2.5E-148 T 06-07-2017 LFZ55_RS00300 eddc971605721864e1578923df278513 463 Gene3D G3DSA:1.20.1250.20 30 235 5.7E-35 T 06-07-2017 LFZ55_RS00300 eddc971605721864e1578923df278513 463 Gene3D G3DSA:1.20.1250.20 244 456 2.4E-30 T 06-07-2017 LFZ55_RS00300 eddc971605721864e1578923df278513 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 06-07-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 LFZ55_RS00300 eddc971605721864e1578923df278513 463 PIRSF PIRSF002808 11 461 1.7E-102 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS14080 17c46d880dcacb0edf3752c1c323a24a 182 Gene3D G3DSA:1.10.443.10 23 178 4.8E-32 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS14080 17c46d880dcacb0edf3752c1c323a24a 182 SUPERFAMILY SSF56349 20 177 6.47E-24 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS14080 17c46d880dcacb0edf3752c1c323a24a 182 Pfam PF00589 Phage integrase family 22 172 2.6E-17 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS04255 5e8ed5cea1659f35bc47d78b7e373c8f 829 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 301 311 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS04255 5e8ed5cea1659f35bc47d78b7e373c8f 829 Pfam PF13954 PapC N-terminal domain 23 168 7.8E-36 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS04255 5e8ed5cea1659f35bc47d78b7e373c8f 829 Pfam PF13953 PapC C-terminal domain 753 813 4.2E-12 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS04255 5e8ed5cea1659f35bc47d78b7e373c8f 829 SUPERFAMILY SSF141729 22 145 1.14E-24 T 06-07-2017 LFZ55_RS04255 5e8ed5cea1659f35bc47d78b7e373c8f 829 Pfam PF00577 Outer membrane usher protein 186 741 2.5E-163 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Gene3D G3DSA:3.30.9.10 211 313 2.9E-53 T 06-07-2017 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Gene3D G3DSA:3.30.9.10 59 145 2.9E-53 T 06-07-2017 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 SUPERFAMILY SSF54373 212 313 3.18E-19 T 06-07-2017 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Gene3D G3DSA:3.50.50.60 1 57 1.0E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Gene3D G3DSA:3.50.50.60 146 208 1.0E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Gene3D G3DSA:3.50.50.60 316 371 1.0E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Pfam PF01266 FAD dependent oxidoreductase 4 351 2.9E-44 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 SUPERFAMILY SSF51905 313 370 1.34E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 SUPERFAMILY SSF51905 2 216 1.34E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14470 beb69b81cf4625389b3cab6cbf432e1f 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 76.511 T 06-07-2017 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Gene3D G3DSA:3.30.9.10 206 228 2.0E-10 T 06-07-2017 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Gene3D G3DSA:3.30.9.10 87 137 2.0E-10 T 06-07-2017 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 SUPERFAMILY SSF51905 1 291 4.19E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Gene3D G3DSA:3.50.50.60 1 84 7.6E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Gene3D G3DSA:3.50.50.60 138 205 7.6E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.4E-72 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS05475 5f159f7dcf50456e32c9dcbf14875a57 422 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 422 83.993 T 06-07-2017 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 SUPERFAMILY SSF47384 220 298 4.32E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 1.1E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 1.1E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 1.1E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 1.1E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 456 4.5E-16 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 SMART SM00387 345 457 1.1E-26 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 SMART SM00388 234 302 3.6E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 SUPERFAMILY SSF55874 306 455 2.23E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 Gene3D G3DSA:3.30.565.10 305 457 6.1E-33 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 Pfam PF00672 HAMP domain 161 228 1.0E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 1.5E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS06065 249da11c1b143ffecaf4de90e2d502c7 461 Gene3D G3DSA:1.10.287.130 226 298 6.3E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 SUPERFAMILY SSF53623 105 338 2.86E-77 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 2.2E-25 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.483 T 06-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 8.5E-164 T 06-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Gene3D G3DSA:3.40.1190.10 105 342 8.5E-81 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Pfam PF08245 Mur ligase middle domain 114 318 1.5E-49 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 SUPERFAMILY SSF63418 5 103 2.22E-22 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Gene3D G3DSA:3.40.1390.10 4 103 5.3E-33 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 SUPERFAMILY SSF53244 339 491 7.33E-52 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Pfam PF01225 Mur ligase family, catalytic domain 24 102 9.2E-12 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS19760 c2309d00986962dbc506e85d67d51cca 495 Gene3D G3DSA:3.90.190.20 343 484 3.0E-59 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 179 628 1.7E-230 T 06-07-2017 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 SUPERFAMILY SSF52777 386 627 1.07E-80 T 06-07-2017 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Gene3D G3DSA:3.30.559.10 387 628 8.7E-84 T 06-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 SUPERFAMILY SSF51230 104 195 3.27E-23 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 627 1.4E-79 T 06-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Gene3D G3DSA:4.10.320.10 316 364 1.6E-22 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 SUPERFAMILY SSF51230 1 94 7.85E-23 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Gene3D G3DSA:2.40.50.100 3 76 9.6E-22 T 06-07-2017 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Gene3D G3DSA:2.40.50.100 206 280 1.6E-21 T 06-07-2017 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Gene3D G3DSA:2.40.50.100 106 181 6.5E-22 T 06-07-2017 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Pfam PF02817 e3 binding domain 324 359 2.1E-15 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 SUPERFAMILY SSF51230 205 292 1.83E-22 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Pfam PF00364 Biotin-requiring enzyme 105 175 4.5E-22 T 06-07-2017 IPR000089 Biotin/lipoyl attachment LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Pfam PF00364 Biotin-requiring enzyme 4 73 3.3E-22 T 06-07-2017 IPR000089 Biotin/lipoyl attachment LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 Pfam PF00364 Biotin-requiring enzyme 205 275 6.4E-22 T 06-07-2017 IPR000089 Biotin/lipoyl attachment LFZ55_RS19590 5c8a0452bf5e6d0d878abd785df366f7 628 SUPERFAMILY SSF47005 318 363 2.22E-13 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF81653 115 207 7.19E-21 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 06-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF81665 29 103 3.53E-13 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF81665 619 663 3.53E-13 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF81665 208 299 3.53E-13 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 3.3E-38 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.311 T 06-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 06-07-2017 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Gene3D G3DSA:3.40.1110.10 316 443 1.3E-54 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Gene3D G3DSA:3.40.50.1000 444 563 3.9E-35 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Gene3D G3DSA:2.70.150.10 56 208 4.8E-25 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF56784 293 317 6.07E-39 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF56784 377 404 6.07E-39 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF56784 435 559 6.07E-39 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 Pfam PF00122 E1-E2 ATPase 72 296 2.5E-40 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 SUPERFAMILY SSF81660 316 450 3.27E-37 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 332 1.2E-36 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS17075 677599d620d224b66153aed0dd0054c1 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 1.1E-48 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 06-07-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 Pfam PF01218 Coproporphyrinogen III oxidase 8 299 9.4E-133 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 123 145 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 29 45 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 88 112 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 260 286 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 46 67 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 160 189 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PRINTS PR00073 Coprogen oxidase signature 232 259 1.7E-90 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 SUPERFAMILY SSF102886 3 299 7.19E-138 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 Gene3D G3DSA:3.40.1500.10 3 299 4.0E-137 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 58.598 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06985 c96641320fac6d1d700e7ad876a6d5ed 308 PIRSF PIRSF000166 1 300 1.9E-128 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS05420 4f5dde1b8b56b5df756d2b7d71f30210 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.223 T 06-07-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 LFZ55_RS05420 4f5dde1b8b56b5df756d2b7d71f30210 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 4.0E-65 T 06-07-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 LFZ55_RS05420 4f5dde1b8b56b5df756d2b7d71f30210 149 Pfam PF06610 L-alanine exporter 4 141 7.7E-69 T 06-07-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 1.7E-120 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 SUPERFAMILY SSF56796 5 382 1.44E-131 T 06-07-2017 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 Gene3D G3DSA:1.20.1090.10 185 383 2.2E-73 T 06-07-2017 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS00815 32843f31a971736937ad8a2fbb0cd9c4 383 Gene3D G3DSA:3.40.50.1970 3 184 1.5E-59 T 06-07-2017 LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 PIRSF PIRSF037375 2 656 5.0E-216 T 06-07-2017 IPR017186 Lipase, autotransporter EstA LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 SUPERFAMILY SSF103515 341 656 1.83E-36 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 SMART SM00869 386 645 9.7E-23 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 Gene3D G3DSA:2.40.128.130 359 656 7.9E-42 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 Pfam PF03797 Autotransporter beta-domain 389 635 4.5E-36 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 Gene3D G3DSA:3.40.50.1110 14 176 5.3E-68 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 Gene3D G3DSA:3.40.50.1110 243 352 5.3E-68 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 30 342 2.3E-6 T 06-07-2017 IPR001087 GDSL lipase/esterase GO:0016788 LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 SUPERFAMILY SSF52266 318 346 3.87E-8 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 SUPERFAMILY SSF52266 252 287 3.87E-8 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17710 d01ba6cf952f49d59b94557527bc5ff3 656 SUPERFAMILY SSF52266 29 185 3.87E-8 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 SUPERFAMILY SSF47413 9 75 6.19E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 Pfam PF01381 Helix-turn-helix 21 70 2.4E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 SMART SM00530 17 72 2.6E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 Gene3D G3DSA:1.10.260.40 18 110 3.0E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 Gene3D G3DSA:2.60.120.10 111 184 3.4E-22 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS23225 4c62fd507045f7e468e65bc312238026 188 SUPERFAMILY SSF51182 65 184 1.54E-18 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 Gene3D G3DSA:3.40.190.10 27 150 5.2E-12 T 06-07-2017 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 1.1E-33 T 06-07-2017 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PIRSF PIRSF019574 1 370 1.8E-142 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 2.0E-74 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 Gene3D G3DSA:3.40.190.10 151 319 1.4E-75 T 06-07-2017 LFZ55_RS16060 ec6616af9c370945aac6d707721834bd 370 SUPERFAMILY SSF53850 29 369 8.51E-104 T 06-07-2017 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 345 363 1.3E-31 T 06-07-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 324 339 1.3E-31 T 06-07-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 452 471 1.3E-31 T 06-07-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 565 578 1.3E-31 T 06-07-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 379 391 1.3E-31 T 06-07-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 86 112 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 250 270 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 316 335 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 280 300 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 138 155 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 300 316 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 165 187 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 216 242 1.4E-70 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 327 419 1.4E-19 T 06-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 425 569 1.7E-37 T 06-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LFZ55_RS22265 8e22f6832c04d9f72ed479018fce454c 578 Pfam PF01578 Cytochrome C assembly protein 95 302 2.0E-44 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS11180 ee0b19e8967a8b4d7b87b4629897fd6e 196 Gene3D G3DSA:3.40.50.300 3 196 6.8E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11180 ee0b19e8967a8b4d7b87b4629897fd6e 196 SUPERFAMILY SSF52540 7 196 2.39E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11180 ee0b19e8967a8b4d7b87b4629897fd6e 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.3E-59 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LFZ55_RS11180 ee0b19e8967a8b4d7b87b4629897fd6e 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.8E-81 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LFZ55_RS11180 ee0b19e8967a8b4d7b87b4629897fd6e 196 PIRSF PIRSF015617 1 196 1.8E-70 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 06-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 Gene3D G3DSA:3.30.1330.60 69 173 5.9E-35 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 Pfam PF00691 OmpA family 73 168 1.3E-21 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 174 1.7E-46 T 06-07-2017 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 PRINTS PR01021 OMPA domain signature 104 119 8.5E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 PRINTS PR01021 OMPA domain signature 74 96 8.5E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 PRINTS PR01021 OMPA domain signature 119 135 8.5E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS16840 7ded96ba962342b2858efe3740d9936e 174 SUPERFAMILY SSF103088 61 173 1.09E-34 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.1E-42 T 06-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.412 T 06-07-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Gene3D G3DSA:1.10.8.60 500 584 2.0E-33 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.6E-97 T 06-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 06-07-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 SUPERFAMILY SSF54211 595 771 1.1E-59 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 SUPERFAMILY SSF88697 10 201 5.22E-52 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Gene3D G3DSA:3.30.230.10 590 771 3.1E-77 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.8E-17 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 7.1E-57 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 7.1E-57 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 7.1E-57 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 7.1E-57 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 7.1E-57 T 06-07-2017 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 PIRSF PIRSF001174 1 775 0.0 T 06-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 SMART SM00464 10 202 2.8E-87 T 06-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 06-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 Gene3D G3DSA:3.40.50.300 310 499 2.7E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 SUPERFAMILY SSF52540 313 587 2.65E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18210 f6a62b03b52905c57e68f8da8a9818b0 784 SMART SM00382 348 492 3.4E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Gene3D G3DSA:3.30.470.20 181 305 6.4E-52 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Gene3D G3DSA:3.30.470.20 85 103 6.4E-52 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 6.4E-68 T 06-07-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Gene3D G3DSA:3.40.50.20 3 84 2.1E-27 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 SUPERFAMILY SSF56059 97 302 9.43E-57 T 06-07-2017 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 5.6E-108 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.26 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Gene3D G3DSA:3.30.1490.20 107 180 6.7E-24 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 PIRSF PIRSF039102 37 306 1.3E-95 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 1.2E-20 T 06-07-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19725 9929f16fc6950addd906a37ba10160bb 306 SUPERFAMILY SSF52440 3 96 2.4E-29 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 1.4E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 Gene3D G3DSA:3.90.110.10 170 439 3.0E-85 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 Gene3D G3DSA:3.40.50.720 3 168 1.5E-71 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 1.4E-35 T 06-07-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 SUPERFAMILY SSF51735 4 167 1.89E-55 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 06-07-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.9E-75 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS13595 9b6ca020c2c624ef246e377c5f558ef4 451 SUPERFAMILY SSF56327 173 443 1.17E-77 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS18605 dbce95ad385b41e13b38f5c2747018d5 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 89 7.3E-15 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS18605 dbce95ad385b41e13b38f5c2747018d5 91 SUPERFAMILY SSF159871 2 90 4.71E-23 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS18605 dbce95ad385b41e13b38f5c2747018d5 91 Gene3D G3DSA:3.30.1660.10 22 89 3.3E-24 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS02640 58816fdd9b54eedb2281f07acabf27cb 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 1.3E-76 T 06-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS02640 58816fdd9b54eedb2281f07acabf27cb 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 4.4E-11 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS02640 58816fdd9b54eedb2281f07acabf27cb 188 Gene3D G3DSA:3.40.50.1000 16 181 2.6E-49 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS02640 58816fdd9b54eedb2281f07acabf27cb 188 PIRSF PIRSF006118 13 188 4.0E-73 T 06-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS02640 58816fdd9b54eedb2281f07acabf27cb 188 SUPERFAMILY SSF56784 22 181 2.2E-41 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS03730 799b357456e9de5eeb8fb77ea4fa34a6 294 Pfam PF12835 Integrase 103 251 4.2E-52 T 06-07-2017 IPR024456 Integrase catalytic domain, putative LFZ55_RS03730 799b357456e9de5eeb8fb77ea4fa34a6 294 SUPERFAMILY SSF56349 18 255 9.03E-13 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS03730 799b357456e9de5eeb8fb77ea4fa34a6 294 Pfam PF12834 Phage integrase, N-terminal 1 92 1.3E-34 T 06-07-2017 IPR024457 Putative integrase, N-terminal LFZ55_RS03730 799b357456e9de5eeb8fb77ea4fa34a6 294 Gene3D G3DSA:1.10.443.10 116 276 4.5E-6 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS03730 799b357456e9de5eeb8fb77ea4fa34a6 294 Gene3D G3DSA:1.10.150.130 11 87 4.2E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 SUPERFAMILY SSF47648 200 266 3.92E-16 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.3E-12 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.3E-12 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.3E-12 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 5.4E-5 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 5.4E-5 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 9.5E-54 T 06-07-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 5.8E-15 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Gene3D G3DSA:3.40.1030.10 273 528 6.8E-96 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 SUPERFAMILY SSF52317 3 191 7.7E-44 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.629 T 06-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Gene3D G3DSA:1.20.970.10 201 267 2.8E-27 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 5.0E-43 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 1.1E-128 T 06-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 1.5E-101 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 Gene3D G3DSA:3.40.50.880 3 192 1.5E-52 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 SUPERFAMILY SSF52418 269 527 7.06E-91 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 5.2E-33 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 5.2E-33 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 5.2E-33 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 5.2E-33 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 5.2E-33 T 06-07-2017 LFZ55_RS11150 434f9966fc43d692c448a981890a16ac 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 5.2E-33 T 06-07-2017 LFZ55_RS09135 522cf1bda72f210423f1a4fde8d7a088 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 2.4E-40 T 06-07-2017 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 LFZ55_RS09135 522cf1bda72f210423f1a4fde8d7a088 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 44.661 T 06-07-2017 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 LFZ55_RS09135 522cf1bda72f210423f1a4fde8d7a088 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 4.6E-29 T 06-07-2017 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 SUPERFAMILY SSF103515 1103 1384 3.4E-44 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Gene3D G3DSA:2.40.128.130 1089 1384 2.3E-78 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 SMART SM00869 1122 1373 2.3E-28 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 6.6E-6 T 06-07-2017 IPR024973 ESPR domain LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 65 85 2.8E-14 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 645 667 2.8E-14 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 262 280 2.8E-14 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 974 1384 1.7E-73 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 SUPERFAMILY SSF51126 922 1081 9.73E-68 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 SUPERFAMILY SSF51126 396 523 9.73E-68 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 SUPERFAMILY SSF51126 611 852 9.73E-68 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Pfam PF02395 Immunoglobulin A1 protease 54 728 9.3E-124 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Pfam PF03797 Autotransporter beta-domain 1122 1370 1.6E-31 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Gene3D G3DSA:2.160.20.20 873 1054 5.8E-87 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Gene3D G3DSA:2.160.20.20 356 521 5.8E-87 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS14035 022a0f949c0e824cd9e9a66e141e57a7 1384 Gene3D G3DSA:2.160.20.20 634 833 5.8E-87 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.7E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.7E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.7E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.7E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 SMART SM00347 46 148 2.2E-33 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 Gene3D G3DSA:1.10.10.10 16 168 7.0E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 SUPERFAMILY SSF46785 22 166 2.84E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05345 45870494002d99357634c95d958f92e5 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS11325 c8a79ed227d258c12ad27b9186e43064 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 4.2E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11325 c8a79ed227d258c12ad27b9186e43064 296 SUPERFAMILY SSF161098 90 275 2.09E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11325 c8a79ed227d258c12ad27b9186e43064 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 6.4E-10 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LFZ55_RS11325 c8a79ed227d258c12ad27b9186e43064 296 Gene3D G3DSA:1.10.3720.10 86 290 7.5E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 6.5E-91 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 Gene3D G3DSA:3.20.20.70 1 221 2.2E-94 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 SUPERFAMILY SSF51366 3 218 1.93E-76 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.5E-96 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01775 5502b1e93434fde2387c18732b7aca0c 225 PIRSF PIRSF001461 1 225 1.1E-106 T 06-07-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 Pfam PF17151 Periplasmic sensor domain 41 226 1.2E-81 T 06-07-2017 IPR033416 Periplasmic sensor domain CHASE7 LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 557 6.6E-47 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 SMART SM00267 387 561 2.3E-65 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 560 2.0E-59 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 Gene3D G3DSA:3.30.70.270 400 564 3.1E-52 T 06-07-2017 LFZ55_RS09495 df39402a8cf86df817791d5117896e1a 570 SUPERFAMILY SSF55073 403 560 1.33E-44 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Pfam PF00141 Peroxidase 403 699 2.2E-34 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Pfam PF00141 Peroxidase 91 396 1.7E-48 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Hamap MF_01961 Catalase-peroxidase [katG]. 11 726 39.429 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.520.10 54 251 4.6E-69 T 06-07-2017 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.520.10 704 725 9.9E-53 T 06-07-2017 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.520.10 432 578 9.9E-53 T 06-07-2017 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 18 726 0.0 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 ProSitePatterns PS00436 Peroxidases active site signature. 97 108 - T 06-07-2017 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 06-07-2017 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.420.10 310 407 9.7E-46 T 06-07-2017 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.420.10 252 274 9.7E-46 T 06-07-2017 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 3.8E-51 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 3.8E-51 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.8E-51 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 3.8E-51 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 3.8E-51 T 06-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 SUPERFAMILY SSF48113 29 429 6.63E-140 T 06-07-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 SUPERFAMILY SSF48113 435 725 8.69E-105 T 06-07-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.3E-18 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.3E-18 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 1.3E-18 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 1.3E-18 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 1.3E-18 T 06-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LFZ55_RS23000 6577583a31d353bc0ea4923c61871787 726 Gene3D G3DSA:1.10.420.10 579 700 9.1E-45 T 06-07-2017 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 SUPERFAMILY SSF51735 1 203 1.46E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 Gene3D G3DSA:1.10.1040.10 203 380 1.6E-49 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 SUPERFAMILY SSF48179 204 379 4.76E-46 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 1.2E-68 T 06-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 06-07-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 2.8E-26 T 06-07-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.5 T 06-07-2017 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS00790 0e66a14028f47aaac4ffee98b733746d 382 Gene3D G3DSA:3.40.50.720 2 201 3.5E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00345 e538c4937c14786adde88bdfc41dc494 300 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 4.4E-69 T 06-07-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 LFZ55_RS00345 e538c4937c14786adde88bdfc41dc494 300 SUPERFAMILY SSF103481 191 296 1.57E-12 T 06-07-2017 LFZ55_RS00345 e538c4937c14786adde88bdfc41dc494 300 Pfam PF00892 EamA-like transporter family 158 290 2.5E-19 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS00345 e538c4937c14786adde88bdfc41dc494 300 Pfam PF00892 EamA-like transporter family 6 145 2.6E-20 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS00345 e538c4937c14786adde88bdfc41dc494 300 SUPERFAMILY SSF103481 43 148 2.48E-7 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SMART SM00831 48 121 6.5E-8 T 06-07-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 371 657 4.0E-20 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 377 383 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 51 116 5.0E-14 T 06-07-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF81653 172 274 2.62E-28 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 35 902 0.0 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 732 4.4E-31 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 127 411 3.8E-38 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Pfam PF00122 E1-E2 ATPase 127 366 1.1E-57 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF81660 344 547 1.59E-43 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Gene3D G3DSA:2.70.150.10 154 275 2.1E-42 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Gene3D G3DSA:2.70.150.10 66 101 2.1E-42 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Gene3D G3DSA:3.40.1110.10 367 550 1.0E-37 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Gene3D G3DSA:1.20.1110.10 612 894 3.2E-66 T 06-07-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Gene3D G3DSA:1.20.1110.10 102 153 3.2E-66 T 06-07-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF81665 276 369 3.53E-102 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF81665 50 159 3.53E-102 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF81665 692 900 3.53E-102 T 06-07-2017 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 SUPERFAMILY SSF56784 536 687 7.38E-37 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 305 324 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 288 304 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 409 422 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 3.2E-85 T 06-07-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LFZ55_RS21315 11f7698b18b3f4f6abf035336d2f7d5c 902 Pfam PF00689 Cation transporting ATPase, C-terminus 726 892 1.1E-13 T 06-07-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 Gene3D G3DSA:3.40.50.720 1 179 4.2E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 3.3E-149 T 06-07-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 Gene3D G3DSA:3.90.25.10 264 337 4.7E-51 T 06-07-2017 LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 Gene3D G3DSA:3.90.25.10 180 232 4.7E-51 T 06-07-2017 LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 5.0E-65 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16730 9ecb1839fd28421bfa47231f14a72363 338 SUPERFAMILY SSF51735 1 336 4.2E-101 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 1.7E-17 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 SMART SM00863 653 696 9.9E-22 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 SUPERFAMILY SSF55681 4 255 3.23E-108 T 06-07-2017 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.3E-33 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.3E-33 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.3E-33 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.3E-33 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.3E-33 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 Gene3D G3DSA:3.30.930.10 4 251 1.6E-127 T 06-07-2017 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 SUPERFAMILY SSF55186 552 708 1.44E-51 T 06-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 SUPERFAMILY SSF50447 455 551 5.3E-20 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 Pfam PF02272 DHHA1 domain 800 867 2.4E-17 T 06-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 Pfam PF01411 tRNA synthetases class II (A) 7 554 4.7E-240 T 06-07-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 209.189 T 06-07-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 LFZ55_RS05275 e21b50610494a17e8808e1ae094bfab7 876 SUPERFAMILY SSF101353 256 465 1.83E-61 T 06-07-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 PIRSF PIRSF000235 1 347 3.2E-198 T 06-07-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.593 T 06-07-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.8E-78 T 06-07-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 SUPERFAMILY SSF51412 6 336 3.4E-99 T 06-07-2017 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 Gene3D G3DSA:3.20.20.70 2 342 4.0E-110 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 06-07-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 SMART SM01240 7 347 2.2E-137 T 06-07-2017 LFZ55_RS19655 41f20ec35142aedef3810e1c923abbae 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.7E-208 T 06-07-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 LFZ55_RS12395 9808d15ce6720f8fb8450bdf458680f4 55 Pfam PF00239 Resolvase, N terminal domain 2 55 2.6E-11 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS12395 9808d15ce6720f8fb8450bdf458680f4 55 Gene3D G3DSA:3.40.50.1390 1 55 1.5E-12 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS12395 9808d15ce6720f8fb8450bdf458680f4 55 SUPERFAMILY SSF53041 1 55 5.89E-12 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 SMART SM00382 23 206 4.7E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 Gene3D G3DSA:3.40.50.300 18 218 1.0E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 1.0E-22 T 06-07-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 SUPERFAMILY SSF50331 235 350 3.64E-21 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 Pfam PF03459 TOBE domain 290 350 3.2E-15 T 06-07-2017 IPR005116 Transport-associated OB, type 1 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 Gene3D G3DSA:2.40.50.100 277 348 1.0E-22 T 06-07-2017 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 Pfam PF00005 ABC transporter 18 156 5.6E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 8.3E-161 T 06-07-2017 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 LFZ55_RS16695 56bbf4cc1c625b973e45698b1b780869 352 SUPERFAMILY SSF52540 8 220 1.31E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 SUPERFAMILY SSF46785 49 117 5.15E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 Gene3D G3DSA:1.10.10.10 36 103 5.9E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.5E-8 T 06-07-2017 IPR022687 DTXR-type HTH domain GO:0003677 LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 150 6.3E-15 T 06-07-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 SUPERFAMILY SSF47979 95 151 2.22E-15 T 06-07-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 SMART SM00529 56 155 2.0E-39 T 06-07-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 LFZ55_RS16445 ba4190208c909fceb8164f33daa5f81b 157 Gene3D G3DSA:1.10.60.10 107 150 1.1E-19 T 06-07-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 LFZ55_RS01260 4d365fca1d60f96de41da38122a93890 390 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 350 4.0E-16 T 06-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LFZ55_RS01260 4d365fca1d60f96de41da38122a93890 390 SUPERFAMILY SSF48179 210 385 1.73E-23 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS01260 4d365fca1d60f96de41da38122a93890 390 Gene3D G3DSA:1.10.1040.10 205 387 9.1E-26 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS01260 4d365fca1d60f96de41da38122a93890 390 Gene3D G3DSA:3.40.50.720 2 61 3.4E-5 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 06-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 06-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 06-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 06-07-2017 IPR004087 K Homology domain GO:0003676 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 06-07-2017 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 06-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 06-07-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02070 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 9.5E-19 T 06-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS15415 98ce377c7c49970542ce239b36f16102 174 TIGRFAM TIGR00608 radc: DNA repair protein RadC 51 174 1.5E-41 T 06-07-2017 IPR001405 RadC protein LFZ55_RS15415 98ce377c7c49970542ce239b36f16102 174 Pfam PF04002 RadC-like JAB domain 56 172 1.8E-38 T 06-07-2017 IPR025657 RadC-like JAB domain LFZ55_RS15415 98ce377c7c49970542ce239b36f16102 174 Gene3D G3DSA:3.40.140.10 53 174 8.9E-44 T 06-07-2017 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.2E-25 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.4E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.4E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 3.2E-55 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 SUPERFAMILY SSF46785 3 76 1.57E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 Gene3D G3DSA:1.10.10.10 1 58 2.8E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 Gene3D G3DSA:3.30.750.70 72 153 6.6E-17 T 06-07-2017 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 SMART SM00420 6 58 1.5E-27 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 SUPERFAMILY SSF100950 73 234 1.72E-30 T 06-07-2017 LFZ55_RS01600 763e8d0d3996c4ab542a275d604cd4fc 252 SMART SM01134 72 233 3.7E-71 T 06-07-2017 LFZ55_RS14810 d79ba8bf24d2c4d85203473aa92368af 82 SUPERFAMILY SSF160582 12 67 4.84E-19 T 06-07-2017 LFZ55_RS14810 d79ba8bf24d2c4d85203473aa92368af 82 SMART SM00923 9 56 1.5E-8 T 06-07-2017 IPR005153 MbtH-like protein LFZ55_RS14810 d79ba8bf24d2c4d85203473aa92368af 82 Pfam PF03621 MbtH-like protein 11 55 5.8E-15 T 06-07-2017 IPR005153 MbtH-like protein LFZ55_RS14810 d79ba8bf24d2c4d85203473aa92368af 82 Gene3D G3DSA:3.90.820.10 14 68 1.1E-20 T 06-07-2017 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 Gene3D G3DSA:3.30.1360.80 1 170 7.8E-75 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 9.2E-50 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 9.2E-50 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 9.2E-50 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 9.2E-50 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 9.2E-50 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 2.9E-61 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 PIRSF PIRSF006160 1 162 1.7E-65 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.483 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 SUPERFAMILY SSF63411 4 162 3.85E-66 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS05330 e43b70cd27dba2668c35ddf9cc9a752c 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 5.0E-82 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 SUPERFAMILY SSF51556 63 346 1.87E-71 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 Pfam PF01979 Amidohydrolase family 267 373 2.7E-8 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 Gene3D G3DSA:2.30.40.10 10 70 1.5E-14 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 Pfam PF07969 Amidohydrolase family 52 191 2.1E-7 T 06-07-2017 IPR013108 Amidohydrolase 3 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 Gene3D G3DSA:2.30.40.10 330 380 6.9E-4 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 Gene3D G3DSA:3.20.20.140 71 329 1.3E-124 T 06-07-2017 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 PIRSF PIRSF001238 8 389 2.4E-153 T 06-07-2017 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 SUPERFAMILY SSF51338 5 62 7.21E-25 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 SUPERFAMILY SSF51338 346 387 7.21E-25 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS20680 cc766f52be614aa5b28b89681c6fc0ab 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 9 388 1.5E-167 T 06-07-2017 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 LFZ55_RS18240 197a03311694c2de0efabf60e64e92f0 105 SUPERFAMILY SSF82657 1 89 8.24E-30 T 06-07-2017 IPR002634 BolA protein LFZ55_RS18240 197a03311694c2de0efabf60e64e92f0 105 Pfam PF01722 BolA-like protein 11 84 3.9E-28 T 06-07-2017 IPR002634 BolA protein LFZ55_RS18240 197a03311694c2de0efabf60e64e92f0 105 Gene3D G3DSA:3.30.300.90 1 101 1.4E-30 T 06-07-2017 IPR002634 BolA protein LFZ55_RS18240 197a03311694c2de0efabf60e64e92f0 105 PIRSF PIRSF003113 1 100 6.9E-32 T 06-07-2017 IPR002634 BolA protein LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 SUPERFAMILY SSF51556 230 518 4.09E-28 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 SUPERFAMILY SSF51556 91 153 4.09E-28 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 SUPERFAMILY SSF51338 518 562 4.8E-23 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 SUPERFAMILY SSF51338 26 92 4.8E-23 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 Gene3D G3DSA:3.20.20.140 232 514 3.2E-17 T 06-07-2017 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 Gene3D G3DSA:3.20.20.140 95 114 3.2E-17 T 06-07-2017 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 Gene3D G3DSA:2.30.40.10 30 93 1.3E-17 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 Gene3D G3DSA:2.30.40.10 518 560 1.3E-17 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS12845 47b457e1b629188958abb38da468858b 568 Pfam PF07969 Amidohydrolase family 80 559 1.3E-94 T 06-07-2017 IPR013108 Amidohydrolase 3 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Pfam PF09312 SurA N-terminal domain 25 142 3.0E-46 T 06-07-2017 IPR015391 SurA N-terminal LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 SUPERFAMILY SSF54534 173 275 1.11E-27 T 06-07-2017 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Pfam PF13616 PPIC-type PPIASE domain 284 383 2.4E-26 T 06-07-2017 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Gene3D G3DSA:3.10.50.40 283 406 4.2E-37 T 06-07-2017 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Gene3D G3DSA:3.10.50.40 167 277 4.7E-32 T 06-07-2017 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.461 T 06-07-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 5.0E-21 T 06-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 Gene3D G3DSA:1.10.3120.10 37 116 1.2E-5 T 06-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 SUPERFAMILY SSF109998 25 201 1.26E-43 T 06-07-2017 IPR027304 Trigger factor/SurA domain LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 SUPERFAMILY SSF54534 283 384 9.81E-33 T 06-07-2017 LFZ55_RS19935 4102a7388d279e17166898b2987a6539 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 06-07-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Gene3D G3DSA:3.20.190.10 2 124 1.6E-17 T 06-07-2017 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 SUPERFAMILY SSF46946 126 214 8.51E-18 T 06-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 8.1E-11 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Gene3D G3DSA:1.10.8.50 127 263 1.5E-32 T 06-07-2017 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 SUPERFAMILY SSF57716 226 263 3.64E-11 T 06-07-2017 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 SMART SM00898 2 110 1.1E-14 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 SMART SM01232 126 221 1.9E-13 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 SUPERFAMILY SSF81624 2 127 8.9E-26 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 3.7E-11 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.7E-9 T 06-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 LFZ55_RS16955 8316d32c6610a7a25b6d7f419cc4e404 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 74.109 T 06-07-2017 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 Gene3D G3DSA:1.10.260.40 2 53 1.0E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 Pfam PF13377 Periplasmic binding protein-like domain 171 332 4.3E-42 T 06-07-2017 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 SUPERFAMILY SSF53822 60 332 3.81E-89 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 Gene3D G3DSA:3.40.50.2300 54 178 2.1E-41 T 06-07-2017 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.9E-20 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 SUPERFAMILY SSF47413 2 59 1.1E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 SMART SM00354 1 71 1.3E-34 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 LFZ55_RS23985 746d55ab49518d02aa26ba0f389eb06d 332 Gene3D G3DSA:3.40.50.2300 179 308 2.5E-54 T 06-07-2017 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 363 390 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 194 212 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 154 172 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 175 192 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 91 114 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PRINTS PR00067 Catalase signature 395 421 3.7E-67 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 Pfam PF06628 Catalase-related immune-responsive 496 559 3.6E-17 T 06-07-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 Gene3D G3DSA:3.40.50.880 597 750 8.5E-46 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 Pfam PF00199 Catalase 78 463 2.0E-177 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 SUPERFAMILY SSF52317 596 739 5.21E-14 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 ProSitePatterns PS00438 Catalase proximal active site signature. 114 130 - T 06-07-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 SMART SM01060 78 466 5.5E-275 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 Gene3D G3DSA:2.40.180.10 56 433 2.1E-180 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 SUPERFAMILY SSF56634 44 580 4.06E-224 T 06-07-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 PIRSF PIRSF038927 41 748 0.0 T 06-07-2017 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LFZ55_RS13585 7a4704e66d779a994625b56fac86ebda 750 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 408 416 - T 06-07-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 341 1.8E-95 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 06-07-2017 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 5.0E-19 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 167 7.1E-40 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.357 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04810 9102ce9c99e57031bb5d8cb0ee0106ab 349 SUPERFAMILY SSF55120 3 339 1.15E-101 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.4E-26 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Gene3D G3DSA:3.40.50.980 267 424 2.4E-28 T 06-07-2017 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Pfam PF00501 AMP-binding enzyme 83 522 7.7E-93 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 06-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Gene3D G3DSA:3.30.300.30 518 637 9.4E-30 T 06-07-2017 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Gene3D G3DSA:3.40.50.980 79 266 2.9E-45 T 06-07-2017 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Gene3D G3DSA:2.30.38.10 439 515 5.2E-8 T 06-07-2017 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.4E-18 T 06-07-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.038 T 06-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 LFZ55_RS22295 d801592735599e01b7d65b8b594a80a5 652 SUPERFAMILY SSF56801 11 643 1.31E-190 T 06-07-2017 LFZ55_RS15925 bdfb9d0084ed56b73ee3832cbd9be3de 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 295 3.1E-16 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS15925 bdfb9d0084ed56b73ee3832cbd9be3de 372 SUPERFAMILY SSF111369 53 299 4.71E-28 T 06-07-2017 LFZ55_RS15925 bdfb9d0084ed56b73ee3832cbd9be3de 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 363 2.0E-54 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS15925 bdfb9d0084ed56b73ee3832cbd9be3de 372 Gene3D G3DSA:2.40.50.100 184 215 9.7E-14 T 06-07-2017 LFZ55_RS15925 bdfb9d0084ed56b73ee3832cbd9be3de 372 Gene3D G3DSA:2.40.50.100 62 95 9.7E-14 T 06-07-2017 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 SUPERFAMILY SSF50939 37 410 7.01E-69 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 Gene3D G3DSA:2.120.10.10 41 410 3.4E-84 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 PRINTS PR01803 Trypanosome sialidase signature 243 261 3.6E-8 T 06-07-2017 IPR008377 Trypanosome sialidase GO:0004308|GO:0009405 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 PRINTS PR01803 Trypanosome sialidase signature 204 221 3.6E-8 T 06-07-2017 IPR008377 Trypanosome sialidase GO:0004308|GO:0009405 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 PRINTS PR01803 Trypanosome sialidase signature 277 295 3.6E-8 T 06-07-2017 IPR008377 Trypanosome sialidase GO:0004308|GO:0009405 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 LFZ55_RS08060 2f3f21c8478ec7c76ee6bcc2b0183e8f 412 Pfam PF13859 BNR repeat-like domain 69 391 2.9E-29 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 105 3.7E-20 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 Gene3D G3DSA:1.10.10.10 15 107 7.4E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 SMART SM00862 31 105 3.0E-18 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 SUPERFAMILY SSF46894 10 107 1.08E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 SUPERFAMILY SSF48452 277 462 1.16E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS05030 b770563e135db70dd3ddcc0274a229df 553 Gene3D G3DSA:1.25.40.10 276 467 1.5E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23825 bdc7fa4962116fe9cd20c54c32b01b5a 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 57.614 T 06-07-2017 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 LFZ55_RS23825 bdc7fa4962116fe9cd20c54c32b01b5a 348 Pfam PF02706 Chain length determinant protein 15 162 6.3E-15 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LFZ55_RS23825 bdc7fa4962116fe9cd20c54c32b01b5a 348 SUPERFAMILY SSF160355 54 318 2.09E-87 T 06-07-2017 LFZ55_RS23825 bdc7fa4962116fe9cd20c54c32b01b5a 348 Gene3D G3DSA:3.30.1890.10 54 221 1.3E-92 T 06-07-2017 LFZ55_RS23825 bdc7fa4962116fe9cd20c54c32b01b5a 348 Gene3D G3DSA:3.30.1890.10 257 318 1.3E-92 T 06-07-2017 LFZ55_RS10680 0f9e5e082db4edcd365d4aa3cd5d394b 582 Gene3D G3DSA:3.40.1090.10 59 122 3.2E-7 T 06-07-2017 LFZ55_RS10680 0f9e5e082db4edcd365d4aa3cd5d394b 582 Pfam PF01734 Patatin-like phospholipase 59 288 1.2E-17 T 06-07-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LFZ55_RS10680 0f9e5e082db4edcd365d4aa3cd5d394b 582 SUPERFAMILY SSF52151 59 198 4.97E-19 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS10680 0f9e5e082db4edcd365d4aa3cd5d394b 582 SUPERFAMILY SSF52151 226 344 4.97E-19 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 SMART SM00155 285 312 10.0 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 SMART SM00155 108 135 2.8E-7 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 Gene3D G3DSA:3.30.870.10 5 162 1.1E-39 T 06-07-2017 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 Gene3D G3DSA:3.30.870.10 206 360 5.9E-32 T 06-07-2017 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 SUPERFAMILY SSF56024 188 358 1.26E-38 T 06-07-2017 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 SUPERFAMILY SSF56024 4 162 5.38E-39 T 06-07-2017 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.798 T 06-07-2017 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 Pfam PF13091 PLD-like domain 26 161 3.1E-16 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS16560 7e5c6b351a55150d53e90953cc758a38 413 Pfam PF13091 PLD-like domain 213 336 5.4E-26 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS17280 f89ed50ec7cfcc71dfdfff863dcd5b7f 512 SUPERFAMILY SSF56317 216 490 2.88E-37 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17280 f89ed50ec7cfcc71dfdfff863dcd5b7f 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.014 T 06-07-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 LFZ55_RS17280 f89ed50ec7cfcc71dfdfff863dcd5b7f 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 5.8E-41 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17280 f89ed50ec7cfcc71dfdfff863dcd5b7f 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 8.0E-118 T 06-07-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 LFZ55_RS17280 f89ed50ec7cfcc71dfdfff863dcd5b7f 512 Gene3D G3DSA:3.60.110.10 217 478 4.5E-20 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Gene3D G3DSA:3.30.390.30 337 462 4.5E-44 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PIRSF PIRSF000350 1 468 4.7E-87 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Gene3D G3DSA:3.50.50.60 152 271 8.3E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 7.0E-151 T 06-07-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 SUPERFAMILY SSF55424 343 466 1.01E-38 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 SUPERFAMILY SSF51905 2 338 3.52E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 4.0E-62 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.8E-41 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.8E-41 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.8E-41 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.8E-41 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.8E-41 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Gene3D G3DSA:3.50.50.60 6 149 1.7E-67 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Gene3D G3DSA:3.50.50.60 272 336 1.7E-67 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.8E-70 T 06-07-2017 LFZ55_RS19585 6a102a93930cd1c6eadad8c0248afe04 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 4.1E-35 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 Gene3D G3DSA:3.40.190.10 178 262 7.3E-22 T 06-07-2017 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 SUPERFAMILY SSF46785 3 113 5.39E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 Pfam PF03466 LysR substrate binding domain 90 293 1.6E-43 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 SUPERFAMILY SSF53850 90 297 1.06E-42 T 06-07-2017 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 Gene3D G3DSA:3.40.190.10 92 177 1.2E-17 T 06-07-2017 LFZ55_RS07110 e972810ba6d37627511da2b02b079e6e 308 Gene3D G3DSA:1.10.10.10 2 82 9.6E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21390 96479125dcb4552f9a3c6a2e7c296335 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 7.2E-68 T 06-07-2017 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 LFZ55_RS21390 96479125dcb4552f9a3c6a2e7c296335 120 Pfam PF14272 Glycine-rich SFCGS 4 117 4.0E-59 T 06-07-2017 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 7.0E-148 T 06-07-2017 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.668 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.7E-165 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 PIRSF PIRSF000450 1 308 1.9E-145 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 Gene3D G3DSA:3.40.50.880 34 301 6.0E-121 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 8.3E-130 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LFZ55_RS22670 3938a6b142c8b84ff08757ca5f8ae433 309 SUPERFAMILY SSF52317 17 297 3.36E-100 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Gene3D G3DSA:3.40.980.10 164 328 2.5E-63 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 2.3E-39 T 06-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Gene3D G3DSA:2.170.190.11 51 142 5.0E-34 T 06-07-2017 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Gene3D G3DSA:3.90.105.10 27 50 5.9E-23 T 06-07-2017 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Gene3D G3DSA:3.90.105.10 143 163 5.9E-23 T 06-07-2017 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 5.6E-21 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 SMART SM00852 181 318 5.1E-41 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 3.2E-34 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 SUPERFAMILY SSF53218 178 321 6.28E-43 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 06-07-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 SUPERFAMILY SSF63882 7 177 2.09E-57 T 06-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Gene3D G3DSA:2.40.340.10 329 402 2.5E-35 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 Pfam PF00994 Probable molybdopterin binding domain 182 317 6.0E-27 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16380 2dd24dc4984d7ac474a558b045365840 411 SUPERFAMILY SSF63867 328 407 2.88E-25 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS10740 2b8cc2bdbdf7b7b8231d091402d23383 438 SUPERFAMILY SSF56322 10 432 7.46E-95 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS10740 2b8cc2bdbdf7b7b8231d091402d23383 438 Gene3D G3DSA:3.60.120.10 48 433 2.4E-84 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS10740 2b8cc2bdbdf7b7b8231d091402d23383 438 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 1.7E-204 T 06-07-2017 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS10740 2b8cc2bdbdf7b7b8231d091402d23383 438 Pfam PF00425 chorismate binding enzyme 173 424 6.4E-69 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 Gene3D G3DSA:3.40.50.850 1 230 3.3E-75 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 Pfam PF00857 Isochorismatase family 32 204 3.7E-35 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 Gene3D G3DSA:1.10.1200.10 231 282 8.4E-5 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 Pfam PF00550 Phosphopantetheine attachment site 217 276 3.2E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PIRSF PIRSF001111 1 285 2.5E-130 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 80 99 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 112 134 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 2 14 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 63 80 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 186 203 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 PRINTS PR01398 Isochorismatase signature 168 186 6.7E-51 T 06-07-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 SUPERFAMILY SSF47336 213 280 6.81E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17580 890ac8570e2ef61531b9cb2f19c26c4a 285 SUPERFAMILY SSF52499 1 208 3.79E-63 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 SMART SM00847 464 559 1.7E-36 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 SUPERFAMILY SSF52540 74 601 2.25E-111 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 6.0E-17 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 2.2E-236 T 06-07-2017 IPR024590 RNA helicase HrpA, C-terminal LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 SMART SM00490 304 404 1.3E-14 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Gene3D G3DSA:3.40.50.300 271 416 1.2E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Gene3D G3DSA:3.40.50.300 77 233 2.9E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Pfam PF00271 Helicase conserved C-terminal domain 286 403 1.6E-10 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 SMART SM00487 75 259 3.9E-27 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 SMART SM00382 92 384 5.8E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 06-07-2017 IPR010222 RNA helicase HrpA GO:0004004 LFZ55_RS11705 69ecbc56df90eaff4984bad6ac007cc9 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 600 698 2.3E-16 T 06-07-2017 IPR011709 Domain of unknown function DUF1605 LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 3.1E-109 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.2E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 SUPERFAMILY SSF55920 3 255 3.01E-94 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 Gene3D G3DSA:3.90.230.10 3 258 1.5E-102 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 44.081 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LFZ55_RS19325 d8cff945015a51d8f96e13a7e7db5c53 264 Pfam PF00557 Metallopeptidase family M24 12 242 8.3E-55 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 Gene3D G3DSA:3.40.30.10 120 204 5.6E-25 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 Gene3D G3DSA:3.40.30.10 1 118 8.7E-43 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 SUPERFAMILY SSF52833 21 205 1.21E-46 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 PIRSF PIRSF001488 1 207 2.2E-89 T 06-07-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LFZ55_RS23465 231d2569705c1042d3f2fc053a3e5434 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 8.0E-30 T 06-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 8.6E-16 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 SMART SM00418 16 95 1.1E-26 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 Gene3D G3DSA:1.10.10.10 3 98 8.8E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 SUPERFAMILY SSF46785 11 98 5.04E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 7.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 7.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LFZ55_RS05440 b8157dece6549c7a3a0bb0d953249fb9 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 7.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 SUPERFAMILY SSF53335 4 386 1.49E-96 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 115 129 1.8E-13 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 161 174 1.8E-13 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 1.8E-13 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 76 88 - T 06-07-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 Gene3D G3DSA:3.90.120.10 335 373 7.1E-9 T 06-07-2017 LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 Gene3D G3DSA:3.40.50.150 1 247 6.6E-61 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 Pfam PF00145 C-5 cytosine-specific DNA methylase 8 386 1.3E-65 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21020 7008c5e4146b02c3f546ace6c37fd1d7 400 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 188 1.9E-44 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 7.4E-82 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 Gene3D G3DSA:3.40.50.450 2 215 6.0E-75 T 06-07-2017 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.889 T 06-07-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 SUPERFAMILY SSF53784 3 312 2.22E-113 T 06-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 06-07-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.0E-124 T 06-07-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 PIRSF PIRSF000532 1 320 3.4E-131 T 06-07-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LFZ55_RS23145 a0a31bce18dcd7dbb6d36c5d06f29d9b 320 Pfam PF00365 Phosphofructokinase 4 276 3.6E-106 T 06-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 Gene3D G3DSA:3.40.710.10 227 455 5.0E-66 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 8.2E-39 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 8.2E-39 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 8.2E-39 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 8.2E-39 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 8.2E-39 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 447 6.2E-181 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 1.4E-171 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02720 9ab98a95b41caf5b7d027d2ee3ae9d2e 477 SUPERFAMILY SSF56601 23 473 4.2E-101 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS05005 2714c1a4049c99ab9418b29c01b41298 82 Pfam PF00550 Phosphopantetheine attachment site 15 73 3.8E-5 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS05005 2714c1a4049c99ab9418b29c01b41298 82 Gene3D G3DSA:1.10.1200.10 4 77 2.2E-18 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS05005 2714c1a4049c99ab9418b29c01b41298 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 76 5.0E-4 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05005 2714c1a4049c99ab9418b29c01b41298 82 SUPERFAMILY SSF47336 2 76 4.71E-14 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 76 2.0E-12 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Gene3D G3DSA:3.40.50.220 1 100 3.0E-29 T 06-07-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 SUPERFAMILY SSF55904 563 711 4.05E-44 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 SUPERFAMILY SSF52172 1 100 7.95E-25 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Gene3D G3DSA:3.40.640.10 101 411 5.0E-114 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 PIRSF PIRSF009393 2 711 2.0E-283 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Gene3D G3DSA:3.90.1150.10 413 585 6.1E-74 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 3.0E-197 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 5.6E-46 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 Gene3D G3DSA:3.90.100.10 586 711 2.2E-37 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS03755 36451f6200482c523402d5062cf27cb3 711 SUPERFAMILY SSF53383 101 559 1.28E-120 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 SUPERFAMILY SSF52833 4 82 7.12E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 3.7E-52 T 06-07-2017 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 Gene3D G3DSA:3.40.30.10 4 82 7.1E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 PRINTS PR00160 Glutaredoxin signature 3 21 6.0E-12 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 PRINTS PR00160 Glutaredoxin signature 66 79 6.0E-12 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 PRINTS PR00160 Glutaredoxin signature 52 65 6.0E-12 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 Pfam PF00462 Glutaredoxin 4 69 6.9E-17 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LFZ55_RS16085 bb9c5f787cb2e10386a11ae76a3a248a 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 06-07-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.392 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 SUPERFAMILY SSF51658 4 438 2.02E-173 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 Gene3D G3DSA:3.20.20.150 3 439 1.1E-212 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 9.9E-218 T 06-07-2017 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 156 175 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 207 226 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 133 153 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 180 201 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 271 298 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 92 114 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 300 311 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 333 344 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS00905 7d6ec6ff2b0f08675938d20abd8bc55b 440 PRINTS PR00688 Xylose isomerase signature 229 253 3.4E-85 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 Gene3D G3DSA:1.20.1560.10 17 331 8.6E-34 T 06-07-2017 LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 SMART SM00382 370 562 5.9E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 Pfam PF00005 ABC transporter 361 510 4.8E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 SUPERFAMILY SSF52540 338 581 3.72E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 Gene3D G3DSA:3.40.50.300 344 575 8.4E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 SUPERFAMILY SSF90123 17 329 6.41E-37 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS10730 50191e74ffda321ec8fafc6694aa0e87 600 Pfam PF00664 ABC transporter transmembrane region 34 291 1.7E-6 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS06960 77e36aff5e4733282a423d309b213d82 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 3.7E-202 T 06-07-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 LFZ55_RS06960 77e36aff5e4733282a423d309b213d82 453 Gene3D G3DSA:1.10.220.70 56 141 2.3E-34 T 06-07-2017 LFZ55_RS06960 77e36aff5e4733282a423d309b213d82 453 Gene3D G3DSA:3.20.20.70 143 453 5.5E-158 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06960 77e36aff5e4733282a423d309b213d82 453 Gene3D G3DSA:2.30.170.30 1 54 2.7E-26 T 06-07-2017 LFZ55_RS06960 77e36aff5e4733282a423d309b213d82 453 PIRSF PIRSF018788 1 453 1.8E-232 T 06-07-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 SUPERFAMILY SSF48452 36 137 6.32E-12 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 Gene3D G3DSA:1.25.40.10 37 147 1.6E-9 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 150 4.4E-38 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 PIRSF PIRSF003165 1 162 1.3E-63 T 06-07-2017 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 48 67 3.7E-11 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 72 94 3.7E-11 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 23 46 3.7E-11 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 104 126 3.7E-11 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 Pfam PF07720 Tetratricopeptide repeat 71 104 6.7E-12 T 06-07-2017 IPR011716 Tetratricopeptide TPR-3 LFZ55_RS04980 515861d3eb2714e38178e645763f7f3c 165 Pfam PF07720 Tetratricopeptide repeat 37 70 4.2E-13 T 06-07-2017 IPR011716 Tetratricopeptide TPR-3 LFZ55_RS22270 936a2dbe369b651c887feaa50e9d52b2 318 Gene3D G3DSA:1.20.1630.10 13 295 7.3E-8 T 06-07-2017 LFZ55_RS22270 936a2dbe369b651c887feaa50e9d52b2 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 318 3.8E-145 T 06-07-2017 IPR017566 NrfD LFZ55_RS22270 936a2dbe369b651c887feaa50e9d52b2 318 Pfam PF03916 Polysulphide reductase, NrfD 6 318 3.7E-102 T 06-07-2017 IPR005614 NrfD family LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 06-07-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.5E-35 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.5E-35 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.5E-35 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.5E-35 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 1.7E-25 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Gene3D G3DSA:1.10.1780.10 1 141 1.9E-45 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Gene3D G3DSA:1.10.8.60 665 753 1.4E-32 T 06-07-2017 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Gene3D G3DSA:3.40.50.300 442 664 8.6E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.7E-15 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SUPERFAMILY SSF52540 169 426 1.31E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Gene3D G3DSA:3.40.50.300 167 350 4.0E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SMART SM00382 206 351 1.5E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SMART SM00382 487 654 3.0E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SUPERFAMILY SSF52540 437 747 1.97E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 06-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 06-07-2017 IPR028299 ClpA/B, conserved site 2 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SMART SM01086 653 744 3.4E-36 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 8.4E-47 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 SUPERFAMILY SSF81923 1 141 2.75E-58 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Gene3D G3DSA:1.10.8.60 351 435 2.9E-30 T 06-07-2017 LFZ55_RS15905 6c1876b7477feccca495a5431cde2c8f 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 5.6E-13 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 ProSitePatterns PS00216 Sugar transport proteins signature 1. 332 349 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 PRINTS PR00171 Sugar transporter signature 21 31 3.1E-28 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 PRINTS PR00171 Sugar transporter signature 396 408 3.1E-28 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 PRINTS PR00171 Sugar transporter signature 373 394 3.1E-28 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 PRINTS PR00171 Sugar transporter signature 288 298 3.1E-28 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 PRINTS PR00171 Sugar transporter signature 130 149 3.1E-28 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 Pfam PF00083 Sugar (and other) transporter 14 478 6.5E-147 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 1 474 1.5E-158 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 SUPERFAMILY SSF103473 5 476 9.55E-63 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 Gene3D G3DSA:1.20.1250.20 51 227 3.2E-19 T 06-07-2017 LFZ55_RS22560 0b36b6bd12c11eca9a11b239ad24297d 491 Gene3D G3DSA:1.20.1250.20 281 476 4.2E-26 T 06-07-2017 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.275 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.9E-21 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 Gene3D G3DSA:3.40.50.300 198 361 1.2E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 SUPERFAMILY SSF54980 365 421 4.39E-14 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 9.8E-31 T 06-07-2017 IPR025121 GTPase HflX, N-terminal LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.3E-155 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 SUPERFAMILY SSF52540 197 373 2.31E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 PIRSF PIRSF006809 3 420 9.1E-152 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 6.1E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 6.1E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.1E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS21720 77b8b364fa0e04d14dc33b7f10323a4f 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 8.0E-30 T 06-07-2017 IPR032305 GTP-binding protein, middle domain LFZ55_RS11480 fb57853f7dae37004044debbd2d70c6d 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 6.8E-54 T 06-07-2017 IPR021147 Protein of unknown function DUF697 LFZ55_RS11480 fb57853f7dae37004044debbd2d70c6d 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.038 T 06-07-2017 IPR006507 Uncharacterised protein family UPF0283 LFZ55_RS11480 fb57853f7dae37004044debbd2d70c6d 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 341 1.8E-148 T 06-07-2017 IPR006507 Uncharacterised protein family UPF0283 LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 Gene3D G3DSA:1.10.2020.10 46 137 4.8E-44 T 06-07-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 SUPERFAMILY SSF51556 3 465 8.84E-182 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 Gene3D G3DSA:3.20.20.140 4 44 4.9E-162 T 06-07-2017 LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 Gene3D G3DSA:3.20.20.140 139 466 4.9E-162 T 06-07-2017 LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.122 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS03100 195d0b95d970afe33c598ecbef562c32 470 Pfam PF02614 Glucuronate isomerase 1 465 5.4E-227 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 225.713 T 06-07-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 1.5E-232 T 06-07-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 PIRSF PIRSF016049 1 393 4.4E-184 T 06-07-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 Gene3D G3DSA:3.20.20.150 1 392 1.4E-155 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 2.1E-165 T 06-07-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 SUPERFAMILY SSF51658 1 133 3.55E-80 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS03560 0d5115bc3869f9dc97985d4da1618fca 394 SUPERFAMILY SSF51658 163 383 3.55E-80 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 Gene3D G3DSA:3.40.50.1450 5 145 1.6E-24 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 SUPERFAMILY SSF53163 4 152 6.02E-36 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.4E-12 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.4E-12 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 PRINTS PR00446 Hydrogen uptake protein signature 33 50 1.4E-12 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.4E-12 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.4E-12 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 1.6E-34 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 147 1.3E-64 T 06-07-2017 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 LFZ55_RS05185 de066ee839ea1143f4509f1322a122ee 156 Pfam PF01750 Hydrogenase maturation protease 28 140 9.8E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 Pfam PF00293 NUDIX domain 132 234 1.6E-17 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 SUPERFAMILY SSF55811 79 241 3.64E-41 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 Gene3D G3DSA:3.90.79.10 93 246 5.8E-43 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 SUPERFAMILY SSF55811 4 96 5.0E-29 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 2.0E-12 T 06-07-2017 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LFZ55_RS22750 fd6c7d79d381ad1e49b16f05af4be6a3 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.475 T 06-07-2017 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Pfam PF01709 Transcriptional regulator 7 238 6.6E-76 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 4 241 55.428 T 06-07-2017 IPR026562 Probable transcriptional regulatory protein YeeN LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 5 238 2.3E-64 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Gene3D G3DSA:3.30.70.980 135 205 2.0E-20 T 06-07-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Gene3D G3DSA:1.10.10.200 5 80 4.7E-28 T 06-07-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Gene3D G3DSA:3.30.1270.10 213 239 1.5E-32 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Gene3D G3DSA:3.30.1270.10 85 134 1.5E-32 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 4 240 29.613 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS20810 bfb65fd090ad33c05efd6df7c036e00f 241 SUPERFAMILY SSF75625 5 238 4.32E-76 T 06-07-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 SUPERFAMILY SSF110997 290 359 5.23E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 SUPERFAMILY SSF50685 81 162 4.71E-6 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 Gene3D G3DSA:3.30.70.1070 286 360 2.1E-13 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 Pfam PF03330 Lytic transglycolase 81 168 6.9E-20 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 Pfam PF05036 Sporulation related domain 289 360 6.5E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS17375 412afb4bdd4a3afc3f945a0f3a83fe6b 364 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 182 1.0E-28 T 06-07-2017 IPR012997 Rare lipoprotein A LFZ55_RS13655 cf557ce00fd3e1c6581ee4c427cbfa97 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 440 1.1E-233 T 06-07-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 LFZ55_RS13655 cf557ce00fd3e1c6581ee4c427cbfa97 447 SUPERFAMILY SSF55909 3 441 5.79E-202 T 06-07-2017 LFZ55_RS13655 cf557ce00fd3e1c6581ee4c427cbfa97 447 Gene3D G3DSA:3.75.10.20 1 445 7.3E-230 T 06-07-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 LFZ55_RS13655 cf557ce00fd3e1c6581ee4c427cbfa97 447 Pfam PF04996 Succinylarginine dihydrolase 3 440 2.4E-208 T 06-07-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 LFZ55_RS13655 cf557ce00fd3e1c6581ee4c427cbfa97 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 57.468 T 06-07-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 LFZ55_RS19740 8ad9c5307290cd76146ba1c4f757df48 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.7E-134 T 06-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LFZ55_RS19740 8ad9c5307290cd76146ba1c4f757df48 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 41.976 T 06-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LFZ55_RS19740 8ad9c5307290cd76146ba1c4f757df48 414 Pfam PF01098 Cell cycle protein 47 402 1.9E-129 T 06-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LFZ55_RS19740 8ad9c5307290cd76146ba1c4f757df48 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 06-07-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LFZ55_RS10400 9d17e2daf38430681907f4f9bb0c4b7b 533 Gene3D G3DSA:3.20.20.450 273 513 7.7E-75 T 06-07-2017 IPR001633 EAL domain LFZ55_RS10400 9d17e2daf38430681907f4f9bb0c4b7b 533 SUPERFAMILY SSF141868 273 514 8.63E-74 T 06-07-2017 IPR001633 EAL domain LFZ55_RS10400 9d17e2daf38430681907f4f9bb0c4b7b 533 SMART SM00052 266 507 8.4E-108 T 06-07-2017 IPR001633 EAL domain LFZ55_RS10400 9d17e2daf38430681907f4f9bb0c4b7b 533 Pfam PF00563 EAL domain 275 502 5.6E-62 T 06-07-2017 IPR001633 EAL domain LFZ55_RS10400 9d17e2daf38430681907f4f9bb0c4b7b 533 Pfam PF12792 CSS motif domain associated with EAL 43 239 6.6E-42 T 06-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 SUPERFAMILY SSF52467 183 341 2.18E-57 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 8.3E-50 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 3.2E-42 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 9.6E-56 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Gene3D G3DSA:3.40.50.970 335 537 2.5E-72 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Gene3D G3DSA:3.40.50.1220 184 334 7.4E-58 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 Gene3D G3DSA:3.40.50.970 1 169 1.6E-71 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 SUPERFAMILY SSF52518 1 173 1.06E-60 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 SUPERFAMILY SSF52518 357 546 3.04E-65 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS23920 2fcea78c9a1b1c4f5febd5872c738e20 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.7E-214 T 06-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-14 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-14 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.1E-14 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-14 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.0E-11 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.0E-11 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.0E-11 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.0E-11 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 SUPERFAMILY SSF55124 502 627 2.94E-31 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 PIRSF PIRSF037149 1 835 0.0 T 06-07-2017 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Gene3D G3DSA:3.50.50.60 106 309 1.9E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 06-07-2017 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.3E-15 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 SUPERFAMILY SSF51905 109 309 1.25E-37 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Gene3D G3DSA:3.30.413.10 634 768 8.9E-31 T 06-07-2017 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 SUPERFAMILY SSF51905 1 136 2.72E-16 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.7E-10 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 4.3E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 1.5E-14 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 Gene3D G3DSA:3.50.50.60 2 105 6.7E-22 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01815 7587fc286c0e6d48d6e0c71a84842848 847 SUPERFAMILY SSF56014 633 808 8.64E-47 T 06-07-2017 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 Gene3D G3DSA:2.40.50.140 31 124 8.2E-36 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 SMART SM00316 37 119 9.5E-12 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 Hamap MF_00970 Ribonuclease E [rne]. 1 1053 38.897 T 06-07-2017 IPR028878 Ribonuclease E GO:0006396|GO:0008995 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 4.0E-172 T 06-07-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 Pfam PF00575 S1 RNA binding domain 36 118 3.5E-16 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 Pfam PF10150 Ribonuclease E/G family 121 391 4.6E-94 T 06-07-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 SUPERFAMILY SSF50249 40 124 1.82E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS14335 c3e81e49fe98a02bf7fbf8ca5635c274 1067 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1028 1064 3.0E-16 T 06-07-2017 IPR021968 Polyribonucleotide phosphorylase C-terminal LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 Gene3D G3DSA:2.70.70.10 266 408 9.5E-50 T 06-07-2017 LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.4E-9 T 06-07-2017 IPR013731 Opacity-associated protein A, N-terminal LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 Pfam PF04225 Opacity-associated protein A LysM-like domain 96 170 2.1E-7 T 06-07-2017 IPR007340 Opacity-associated protein A LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 SMART SM00257 97 142 4.6E-6 T 06-07-2017 IPR018392 LysM domain LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 SUPERFAMILY SSF51261 166 407 4.66E-69 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 Pfam PF01551 Peptidase family M23 312 406 9.7E-33 T 06-07-2017 IPR016047 Peptidase M23 LFZ55_RS09975 b0e88446a7feeecaa5c1fbe7bec94353 439 Gene3D G3DSA:3.10.350.10 97 139 3.6E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS12965 7af7f4357d800505e6abca7366fbdb50 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 1.1E-138 T 06-07-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12965 7af7f4357d800505e6abca7366fbdb50 286 Gene3D G3DSA:3.40.1190.20 1 285 2.5E-88 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS12965 7af7f4357d800505e6abca7366fbdb50 286 SUPERFAMILY SSF53613 1 280 1.36E-76 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS12965 7af7f4357d800505e6abca7366fbdb50 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 54.065 T 06-07-2017 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 LFZ55_RS12965 7af7f4357d800505e6abca7366fbdb50 286 Pfam PF08543 Phosphomethylpyrimidine kinase 72 257 6.1E-17 T 06-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 SUPERFAMILY SSF55874 1 200 3.01E-56 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 3.7E-35 T 06-07-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 6.0E-107 T 06-07-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Gene3D G3DSA:3.30.565.10 2 203 1.8E-77 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 SUPERFAMILY SSF118116 437 617 1.06E-43 T 06-07-2017 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Pfam PF08676 MutL C terminal dimerisation domain 438 567 6.9E-24 T 06-07-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.4E-12 T 06-07-2017 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 SMART SM00853 441 576 5.1E-18 T 06-07-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 06-07-2017 IPR014762 DNA mismatch repair, conserved site LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 SUPERFAMILY SSF54211 191 331 4.55E-35 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 SMART SM01340 212 331 3.2E-54 T 06-07-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 615 25.535 T 06-07-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 LFZ55_RS21735 a49dec8c116765dbd3b0628c2da1de52 618 Gene3D G3DSA:3.30.230.10 219 329 5.8E-38 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.945 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF52540 416 618 2.74E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SMART SM00957 6 402 0.0 T 06-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 170 190 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 117 127 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 376 393 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 63 87 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 101 115 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 339 361 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 PRINTS PR00906 SecA protein signature 413 426 6.8E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SMART SM00958 228 358 1.7E-83 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.1E-39 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Gene3D G3DSA:1.10.3060.10 648 831 7.6E-60 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Gene3D G3DSA:3.40.50.300 369 416 2.9E-124 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Gene3D G3DSA:3.40.50.300 2 228 2.9E-124 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Pfam PF07517 SecA DEAD-like domain 7 402 9.1E-132 T 06-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 2.2E-68 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Pfam PF02810 SEC-C motif 881 899 9.9E-11 T 06-07-2017 IPR004027 SEC-C motif LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF52540 368 415 5.32E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF52540 5 228 5.32E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF81886 620 840 3.53E-85 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF81886 877 889 3.53E-85 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 06-07-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 SUPERFAMILY SSF81767 227 368 6.28E-44 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Gene3D G3DSA:3.40.50.300 417 619 2.3E-90 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19690 262379c021516941efa83fd64e74cbbf 901 Gene3D G3DSA:3.90.1440.10 230 368 9.4E-47 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 9.6E-8 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 1.4E-74 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53335 1060 1250 1.35E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.2E-39 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53335 2568 2751 5.88E-24 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.150 2584 2746 5.3E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.150 1909 1940 5.3E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF08415 Nonribosomal peptide synthase 2232 2293 1.4E-16 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF55048 675 736 2.49E-6 T 06-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 6.0E-183 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00668 Condensation domain 1916 2207 2.8E-40 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF51735 1384 1540 7.48E-11 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00824 Thioesterase 2918 3152 9.8E-4 T 06-07-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.5E-16 T 06-07-2017 IPR013217 Methyltransferase type 12 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF08242 Methyltransferase domain 1093 1194 1.1E-20 T 06-07-2017 IPR013217 Methyltransferase type 12 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF52777 1911 2109 1.56E-23 T 06-07-2017 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.47.10 29 288 1.6E-71 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00698 Acyl transferase domain 551 846 1.4E-52 T 06-07-2017 IPR014043 Acyl transferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.366.10 736 846 1.6E-63 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.366.10 546 671 1.6E-63 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF00975 Thioesterase domain 2915 3006 2.1E-19 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.47.10 290 453 1.6E-58 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF52777 2099 2343 3.89E-43 T 06-07-2017 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.720 1556 1745 1.7E-25 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF47336 1817 1928 2.36E-12 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53901 427 447 8.65E-79 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53901 23 143 8.65E-79 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53901 172 397 8.65E-79 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF51735 1556 1786 5.71E-29 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:1.10.1200.10 2828 2898 6.1E-19 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:1.10.1200.10 1819 1892 2.7E-8 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF08659 KR domain 1560 1729 9.1E-37 T 06-07-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 2.7E-25 T 06-07-2017 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 506 3.7E-13 T 06-07-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF53474 2896 3152 5.36E-44 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 7.8E-78 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.150 1049 1247 9.8E-36 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF52151 550 677 2.33E-60 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF52151 738 835 2.33E-60 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SUPERFAMILY SSF47336 2828 2894 1.31E-12 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.1820 2899 3011 2.1E-35 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 Gene3D G3DSA:3.40.50.1820 3085 3152 2.1E-35 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.003 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS10705 b3c41ee41e6959094d9739f81a65130b 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 7.7E-4 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 355 1.9E-123 T 06-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 Pfam PF00155 Aminotransferase class I and II 49 354 4.9E-65 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 358 54.436 T 06-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 Gene3D G3DSA:3.40.640.10 53 257 2.6E-71 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 214 223 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 SUPERFAMILY SSF53383 16 355 4.79E-78 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS08880 8266b796562b419a7f1c71314f2bd4f7 359 Gene3D G3DSA:3.90.1150.10 258 355 3.2E-25 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS23770 bca8eea097583765236954f53a7bf674 461 PIRSF PIRSF006060 1 458 2.8E-65 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS23770 bca8eea097583765236954f53a7bf674 461 Pfam PF00324 Amino acid permease 16 443 7.3E-104 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS23770 bca8eea097583765236954f53a7bf674 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS01010 871661ebf36098a9ac48cbe7ff963070 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 172 3.1E-18 T 06-07-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 LFZ55_RS01010 871661ebf36098a9ac48cbe7ff963070 563 Gene3D G3DSA:3.40.720.10 250 543 9.2E-18 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS01010 871661ebf36098a9ac48cbe7ff963070 563 Pfam PF00884 Sulfatase 250 538 1.6E-49 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS01010 871661ebf36098a9ac48cbe7ff963070 563 SUPERFAMILY SSF53649 250 542 2.8E-21 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SMART SM00091 98 164 1.6E-5 T 06-07-2017 IPR000014 PAS domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Gene3D G3DSA:1.10.287.130 195 254 5.8E-22 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SUPERFAMILY SSF55785 87 195 3.49E-11 T 06-07-2017 IPR000014 PAS domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 420 6.4E-136 T 06-07-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SUPERFAMILY SSF55874 259 423 3.41E-42 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 424 1.3E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.5E-27 T 06-07-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Pfam PF00989 PAS fold 99 194 2.3E-10 T 06-07-2017 IPR013767 PAS fold GO:0006355 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 4.8E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Gene3D G3DSA:3.30.450.20 99 194 8.7E-11 T 06-07-2017 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SMART SM00387 313 425 1.6E-37 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SUPERFAMILY SSF47384 190 268 1.28E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 Gene3D G3DSA:3.30.565.10 255 422 4.5E-42 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 SMART SM00388 203 269 1.0E-22 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS18445 11995074c368c5ea21035147d2a8e2c4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01021 OMPA domain signature 227 249 7.8E-24 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01021 OMPA domain signature 259 274 7.8E-24 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01021 OMPA domain signature 274 290 7.8E-24 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 Pfam PF00691 OmpA family 226 319 5.7E-24 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 SUPERFAMILY SSF56925 22 198 5.23E-46 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 ProSitePatterns PS01068 OmpA-like domain. 261 305 - T 06-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 Gene3D G3DSA:2.40.160.20 11 215 7.9E-82 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 Gene3D G3DSA:3.30.1330.60 216 338 6.3E-41 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 Pfam PF01389 OmpA-like transmembrane domain 23 199 4.6E-76 T 06-07-2017 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 SUPERFAMILY SSF103088 215 338 1.01E-35 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 317 330 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 183 197 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 244 263 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 215 230 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 283 302 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 107 123 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15550 42519652df0592dc5a3ed95d00c2c082 350 PRINTS PR01022 Outer membrane protein A signature 169 183 2.1E-72 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 Pfam PF03473 MOSC domain 139 262 1.4E-29 T 06-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 SUPERFAMILY SSF50800 147 264 1.26E-17 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 SUPERFAMILY SSF50800 3 50 1.26E-17 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 2.3E-26 T 06-07-2017 IPR005303 MOSC, N-terminal beta barrel LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 Gene3D G3DSA:3.10.20.30 284 368 7.8E-22 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 292 362 1.5E-13 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 SUPERFAMILY SSF54292 287 368 3.67E-21 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS15600 1f61069ac2eb48cb468614dd98b808f6 369 SUPERFAMILY SSF141673 4 132 8.63E-27 T 06-07-2017 LFZ55_RS15505 82dc9c3369353e4d4433954f5743d272 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 38.838 T 06-07-2017 IPR022866 Heat shock protein HspQ LFZ55_RS15505 82dc9c3369353e4d4433954f5743d272 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 1.3E-34 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LFZ55_RS15505 82dc9c3369353e4d4433954f5743d272 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 5.0E-20 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LFZ55_RS15505 82dc9c3369353e4d4433954f5743d272 105 SUPERFAMILY SSF141255 4 95 2.22E-30 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LFZ55_RS15505 82dc9c3369353e4d4433954f5743d272 105 SMART SM00992 3 102 5.8E-36 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 30.829 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 SUPERFAMILY SSF53448 8 227 2.6E-61 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 Gene3D G3DSA:3.90.550.10 7 233 9.3E-78 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 8.9E-92 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 06-07-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 LFZ55_RS04800 1f7395c46e15495d81fc043280f90853 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 1.1E-79 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 Pfam PF14821 Threonine synthase N terminus 8 80 5.7E-13 T 06-07-2017 IPR029144 Threonine synthase, N-terminal LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 Gene3D G3DSA:3.40.50.1100 196 401 3.4E-67 T 06-07-2017 LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 Gene3D G3DSA:3.90.1380.10 1 84 7.1E-22 T 06-07-2017 IPR029144 Threonine synthase, N-terminal LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 SUPERFAMILY SSF53686 1 425 1.57E-131 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 398 6.2E-127 T 06-07-2017 IPR004450 Threonine synthase-like LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 369 5.0E-23 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS20310 b2bfa804fe1a8e1a4f0be470506a3735 428 Gene3D G3DSA:3.40.50.1100 106 195 2.5E-12 T 06-07-2017 LFZ55_RS04130 65b4d015f02670d4fea9bdab853f24fc 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.2E-25 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase LFZ55_RS04130 65b4d015f02670d4fea9bdab853f24fc 88 SUPERFAMILY SSF109910 1 78 4.45E-27 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase LFZ55_RS04130 65b4d015f02670d4fea9bdab853f24fc 88 Gene3D G3DSA:1.10.150.250 2 85 9.3E-32 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase LFZ55_RS02435 2d40a6458ceb6afc7c7a11b638775285 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 55.101 T 06-07-2017 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 LFZ55_RS02435 2d40a6458ceb6afc7c7a11b638775285 655 Pfam PF04632 Fusaric acid resistance protein family 11 654 1.8E-162 T 06-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 Gene3D G3DSA:3.40.50.1000 88 185 4.1E-35 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 Gene3D G3DSA:3.40.50.1000 5 19 4.1E-35 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 9.4E-15 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 SUPERFAMILY SSF56784 5 185 1.6E-44 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 8.0E-63 T 06-07-2017 IPR010976 Beta-phosphoglucomutase hydrolase LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.8E-26 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 Gene3D G3DSA:1.10.150.240 20 69 9.1E-6 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.4E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.4E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 3.4E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS05315 e68405a09f7c4dd0a60519803391219e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.4E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 Gene3D G3DSA:1.20.1250.20 14 194 5.2E-15 T 06-07-2017 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 Pfam PF00854 POT family 82 443 5.7E-91 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 SUPERFAMILY SSF103473 284 479 4.05E-6 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 Gene3D G3DSA:1.20.1250.20 280 476 1.1E-4 T 06-07-2017 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 6.9E-187 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 SUPERFAMILY SSF103473 9 289 1.01E-21 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS01300 9cd4054fbfe84e84bb384433b635d239 490 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.819 T 06-07-2017 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 Pfam PF01578 Cytochrome C assembly protein 89 296 5.6E-53 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.0E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 4.8E-289 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 3.1E-121 T 06-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00145 1376867f28f37d99e5da3199e9513e6a 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 1.4E-65 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.7E-7 T 06-07-2017 IPR024726 Ferric iron reductase, C-terminal GO:0051537 LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 125 139 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 93 108 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 197 212 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 56 73 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 241 259 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 173 189 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 16 32 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 PRINTS PR01714 Ferric iron reductase signature 215 231 1.1E-75 T 06-07-2017 IPR008090 Ferric iron reductase LFZ55_RS20535 5640335335788b00824a5a92156bda05 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 237 1.6E-29 T 06-07-2017 IPR022770 Ferric iron reductase FhuF domain LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 SUPERFAMILY SSF53474 160 398 2.22E-46 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 Pfam PF00756 Putative esterase 177 394 1.7E-39 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 Gene3D G3DSA:3.40.50.1820 151 399 7.6E-68 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 Pfam PF11806 Domain of unknown function (DUF3327) 30 160 3.7E-43 T 06-07-2017 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 Gene3D G3DSA:2.60.40.10 4 149 4.8E-57 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS17635 48abdcfe1da708cf9f03eb16316033c9 404 SUPERFAMILY SSF81296 6 155 3.08E-49 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS19670 02813a13a4514c704359810778b44381 63 Gene3D G3DSA:3.30.50.10 2 62 1.7E-27 T 06-07-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 LFZ55_RS19670 02813a13a4514c704359810778b44381 63 SUPERFAMILY SSF57716 3 61 3.35E-22 T 06-07-2017 LFZ55_RS19670 02813a13a4514c704359810778b44381 63 Pfam PF03884 Domain of unknown function (DUF329) 7 57 2.2E-25 T 06-07-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 LFZ55_RS19670 02813a13a4514c704359810778b44381 63 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.578 T 06-07-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 SMART SM00862 153 225 1.5E-17 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 SUPERFAMILY SSF46894 128 226 1.64E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 Gene3D G3DSA:3.40.50.2300 2 125 1.1E-32 T 06-07-2017 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 Gene3D G3DSA:1.10.10.10 129 226 4.2E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 2.5E-15 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 Pfam PF00072 Response regulator receiver domain 5 113 5.5E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 SMART SM00448 3 113 3.2E-33 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00095 2bffdef357b61507ba15a64d05f7072d 230 SUPERFAMILY SSF52172 2 130 7.12E-34 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Gene3D G3DSA:3.30.1490.100 238 349 8.7E-43 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 SUPERFAMILY SSF100879 241 349 4.32E-26 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.071 T 06-07-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Gene3D G3DSA:1.10.150.20 165 237 1.2E-26 T 06-07-2017 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Pfam PF00817 impB/mucB/samB family 7 154 6.7E-48 T 06-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Pfam PF11798 IMS family HHH motif 166 197 2.0E-8 T 06-07-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 SUPERFAMILY SSF56672 1 234 1.87E-93 T 06-07-2017 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Gene3D G3DSA:3.30.70.270 66 164 6.1E-35 T 06-07-2017 LFZ55_RS19025 6b1350ce8df29faed05749076096ffdb 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 342 2.4E-8 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS23735 bec67c0c8915b872de9d12156349c662 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 3.8E-35 T 06-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23735 bec67c0c8915b872de9d12156349c662 246 Gene3D G3DSA:3.40.50.10090 123 245 6.8E-9 T 06-07-2017 LFZ55_RS23735 bec67c0c8915b872de9d12156349c662 246 SUPERFAMILY SSF69618 1 245 7.98E-51 T 06-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23735 bec67c0c8915b872de9d12156349c662 246 Gene3D G3DSA:3.40.50.10090 5 101 4.0E-10 T 06-07-2017 LFZ55_RS06855 a375cc24ed5e8fa3a09f8e39a62d4ccc 191 Pfam PF00293 NUDIX domain 45 148 1.8E-8 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS06855 a375cc24ed5e8fa3a09f8e39a62d4ccc 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 3 186 2.2E-76 T 06-07-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 LFZ55_RS06855 a375cc24ed5e8fa3a09f8e39a62d4ccc 191 SUPERFAMILY SSF55811 8 188 7.58E-50 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS06855 a375cc24ed5e8fa3a09f8e39a62d4ccc 191 Gene3D G3DSA:3.90.79.10 5 186 4.1E-58 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 Pfam PF01791 DeoC/LacD family aldolase 17 251 2.9E-52 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 PIRSF PIRSF001357 11 261 3.0E-77 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 2.3E-87 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 SMART SM01133 16 252 1.8E-79 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 SUPERFAMILY SSF51569 12 252 1.26E-81 T 06-07-2017 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 Gene3D G3DSA:3.20.20.70 8 260 1.0E-93 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS20450 2af28e0cb02cabe5b19868c8d66da651 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 54.584 T 06-07-2017 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 LFZ55_RS02450 e4728a22a0bb9b2c597237d87a278c0c 87 Gene3D G3DSA:3.30.1660.10 18 87 6.8E-31 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS02450 e4728a22a0bb9b2c597237d87a278c0c 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 2.0E-22 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS02450 e4728a22a0bb9b2c597237d87a278c0c 87 SUPERFAMILY SSF159871 3 87 5.1E-28 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS02050 173fb2cdaacd3678a7968e3a88b6734e 100 SUPERFAMILY SSF54189 6 97 2.84E-30 T 06-07-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02050 173fb2cdaacd3678a7968e3a88b6734e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 06-07-2017 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02050 173fb2cdaacd3678a7968e3a88b6734e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 06-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02050 173fb2cdaacd3678a7968e3a88b6734e 100 Pfam PF00276 Ribosomal protein L23 9 95 7.9E-31 T 06-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02050 173fb2cdaacd3678a7968e3a88b6734e 100 Gene3D G3DSA:3.30.70.330 6 98 4.2E-34 T 06-07-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.971 T 06-07-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 Gene3D G3DSA:3.40.50.150 57 284 3.7E-83 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 Gene3D G3DSA:2.30.140.10 4 56 6.3E-21 T 06-07-2017 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 Pfam PF01564 Spermine/spermidine synthase 7 239 3.1E-87 T 06-07-2017 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.9E-124 T 06-07-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 06-07-2017 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 LFZ55_RS19525 a6a82488ee3e3fafb6d75e18e6fdf90b 286 SUPERFAMILY SSF53335 6 283 2.76E-89 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20945 65377d81af66c3d68729890b3ed335ac 135 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 32 135 4.8E-40 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 LFZ55_RS20945 65377d81af66c3d68729890b3ed335ac 135 Pfam PF11072 Protein of unknown function (DUF2859) 19 133 1.3E-41 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 LFZ55_RS22765 603f0b502d666d0bfa7af123c0295fdf 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 5.3E-58 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS22765 603f0b502d666d0bfa7af123c0295fdf 211 SUPERFAMILY SSF51391 5 204 1.44E-64 T 06-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS22765 603f0b502d666d0bfa7af123c0295fdf 211 Gene3D G3DSA:3.20.20.70 5 204 9.9E-68 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS22765 603f0b502d666d0bfa7af123c0295fdf 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 20.069 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS22765 603f0b502d666d0bfa7af123c0295fdf 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 21 189 1.3E-55 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Gene3D G3DSA:3.10.20.30 387 448 9.4E-23 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SUPERFAMILY SSF109604 3 190 2.7E-75 T 06-07-2017 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Pfam PF13291 ACT domain 623 700 3.8E-17 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Pfam PF02824 TGS domain 388 447 1.6E-21 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SUPERFAMILY SSF55021 630 700 1.97E-5 T 06-07-2017 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SMART SM00471 41 153 1.2E-11 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 8.7E-294 T 06-07-2017 IPR004811 RelA/SpoT family GO:0015969 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.5E-35 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Gene3D G3DSA:3.30.460.10 178 324 9.6E-48 T 06-07-2017 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Pfam PF13328 HD domain 26 175 2.9E-53 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SMART SM00954 235 345 7.1E-63 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SUPERFAMILY SSF81271 375 447 2.83E-21 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 Gene3D G3DSA:3.30.70.260 628 698 4.9E-7 T 06-07-2017 LFZ55_RS00525 ee458bd954ba5c55dfe848558a377e0a 703 SUPERFAMILY SSF81301 180 392 2.62E-62 T 06-07-2017 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 SUPERFAMILY SSF55874 337 477 6.42E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 Gene3D G3DSA:3.30.565.10 341 483 1.0E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 Pfam PF00672 HAMP domain 196 260 8.7E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 SUPERFAMILY SSF47384 250 318 7.85E-5 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 473 1.3E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 1.0E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 1.0E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 Pfam PF08918 PhoQ Sensor 10 188 1.4E-85 T 06-07-2017 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 LFZ55_RS14120 8c9478d03e9038b3de39b7545517cab8 487 SMART SM00387 375 481 2.4E-21 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Gene3D G3DSA:3.40.50.300 206 344 5.4E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SMART SM00956 411 514 1.3E-46 T 06-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Pfam PF00570 HRDC domain 533 599 8.9E-25 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Pfam PF09382 RQC domain 406 514 3.1E-33 T 06-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Pfam PF16124 RecQ zinc-binding 343 404 1.4E-15 T 06-07-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SUPERFAMILY SSF47819 530 605 4.8E-26 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Pfam PF00270 DEAD/DEAH box helicase 28 186 3.9E-18 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SMART SM00341 529 609 1.2E-31 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SMART SM00490 250 331 1.4E-28 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Pfam PF00271 Helicase conserved C-terminal domain 224 331 2.8E-20 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SUPERFAMILY SSF52540 208 455 3.93E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 3.5E-273 T 06-07-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.0E-205 T 06-07-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Gene3D G3DSA:1.10.150.80 530 601 1.8E-24 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SMART SM00487 22 218 8.7E-29 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 SUPERFAMILY SSF52540 7 200 1.27E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Gene3D G3DSA:3.40.50.300 6 202 1.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23650 5e0337b14a48b49a147a87ce0e8032b2 609 Gene3D G3DSA:1.10.10.10 345 515 4.3E-59 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 5.5E-130 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 PIRSF PIRSF004692 2 328 1.3E-134 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 Gene3D G3DSA:3.10.580.10 201 325 2.7E-38 T 06-07-2017 LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 Pfam PF01380 SIS domain 47 177 1.9E-34 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 Pfam PF00571 CBS domain 274 325 5.4E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 Pfam PF00571 CBS domain 206 261 1.0E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 Gene3D G3DSA:3.40.50.10490 17 200 2.1E-52 T 06-07-2017 LFZ55_RS02645 62faffd36cf56166d3bd6038aae789f2 328 SUPERFAMILY SSF53697 14 326 1.51E-67 T 06-07-2017 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 7.0E-54 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 6 23 7.0E-54 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 7.0E-54 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 23 44 7.0E-54 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 7.0E-54 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 Pfam PF00293 NUDIX domain 7 144 1.3E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 SUPERFAMILY SSF55811 5 145 2.57E-24 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS09935 1255ef2f8796a68692cf2488854523a1 150 Gene3D G3DSA:3.90.79.10 3 147 3.3E-31 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 SUPERFAMILY SSF52210 123 287 9.29E-57 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 06-07-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 Pfam PF02629 CoA binding domain 6 99 4.3E-31 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 SMART SM00881 4 100 3.2E-37 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.0E-145 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 SUPERFAMILY SSF51735 1 122 1.72E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 Pfam PF00549 CoA-ligase 151 271 2.2E-20 T 06-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 Gene3D G3DSA:3.40.50.261 120 287 1.6E-77 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 PIRSF PIRSF001553 1 289 1.4E-134 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LFZ55_RS16895 1d00f3c757589dfcbbe4491580de0ccc 289 Gene3D G3DSA:3.40.50.720 2 119 5.8E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12790 61e3e164679ce74f538a956ae4d29253 109 Pfam PF00893 Small Multidrug Resistance protein 5 99 6.3E-28 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 LFZ55_RS12790 61e3e164679ce74f538a956ae4d29253 109 SUPERFAMILY SSF103481 12 108 1.44E-16 T 06-07-2017 LFZ55_RS12790 61e3e164679ce74f538a956ae4d29253 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 32.55 T 06-07-2017 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 1.8E-16 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 1.8E-16 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 231 243 1.8E-16 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 1.8E-16 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 316 333 1.8E-16 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 Gene3D G3DSA:2.40.160.10 23 363 6.4E-94 T 06-07-2017 IPR023614 Porin domain LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 237 254 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 155 177 2.1E-67 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 SUPERFAMILY SSF56935 23 363 8.55E-72 T 06-07-2017 LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 316 332 - T 06-07-2017 IPR013793 Porin, Gram-negative type, conserved site LFZ55_RS15630 c9a7367afacec117a56141a5b8ba370f 363 Pfam PF00267 Gram-negative porin 28 363 2.2E-141 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS03325 48dd849fd5d5fc21f1da605d81697fd0 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS03325 48dd849fd5d5fc21f1da605d81697fd0 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 7.6E-79 T 06-07-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 LFZ55_RS03325 48dd849fd5d5fc21f1da605d81697fd0 210 Pfam PF00293 NUDIX domain 59 179 6.8E-13 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS03325 48dd849fd5d5fc21f1da605d81697fd0 210 Gene3D G3DSA:3.90.79.10 10 208 8.7E-57 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS03325 48dd849fd5d5fc21f1da605d81697fd0 210 SUPERFAMILY SSF55811 3 208 4.47E-52 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS18500 2297abc927106c5bb3ecfb3079a4c36c 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.057 T 06-07-2017 IPR003791 Protein of unknown function UPF0178 LFZ55_RS18500 2297abc927106c5bb3ecfb3079a4c36c 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 5.4E-49 T 06-07-2017 IPR003791 Protein of unknown function UPF0178 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 Pfam PF03170 Bacterial cellulose synthase subunit 58 667 9.3E-221 T 06-07-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 300 321 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 553 573 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 383 404 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 87 108 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 219 242 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 516 535 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS01105 d2e80e99d6b2b94620b91d0b4dd2bf6d 766 PRINTS PR01440 Cellulose synthase subunit B signature 177 198 2.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 Gene3D G3DSA:1.10.1240.20 416 484 3.9E-29 T 06-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 419 484 1.7E-22 T 06-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 SUPERFAMILY SSF48435 40 489 1.12E-136 T 06-07-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 SUPERFAMILY SSF53955 491 653 1.85E-51 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 Pfam PF01464 Transglycosylase SLT domain 496 607 2.6E-33 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 513 541 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 Gene3D G3DSA:1.25.20.10 41 401 2.8E-124 T 06-07-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 LFZ55_RS20390 ed22ed5c48b9ebad71f434bccd49979e 657 Gene3D G3DSA:1.10.530.10 487 652 7.3E-54 T 06-07-2017 LFZ55_RS22775 a3295cce864f730472c362da5206bada 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.1E-18 T 06-07-2017 IPR010035 ThiS, thiamine-biosynthesis LFZ55_RS22775 a3295cce864f730472c362da5206bada 66 SUPERFAMILY SSF54285 1 66 1.6E-17 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LFZ55_RS22775 a3295cce864f730472c362da5206bada 66 Pfam PF02597 ThiS family 3 66 2.5E-14 T 06-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 LFZ55_RS22775 a3295cce864f730472c362da5206bada 66 Gene3D G3DSA:3.10.20.30 1 66 3.1E-24 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 SUPERFAMILY SSF55874 433 577 9.95E-26 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 SMART SM00387 473 581 5.9E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 579 1.4E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 358 418 1.7E-7 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Gene3D G3DSA:3.30.565.10 435 576 7.0E-25 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Gene3D G3DSA:3.40.190.10 119 225 9.0E-10 T 06-07-2017 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Gene3D G3DSA:1.10.287.130 354 416 6.4E-4 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 1.0E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 1.0E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 536 1.0E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 SMART SM00388 357 426 7.1E-5 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 262 2.2E-36 T 06-07-2017 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 SUPERFAMILY SSF53850 44 268 5.74E-15 T 06-07-2017 LFZ55_RS13295 47d3bf609ab22f34b9eecec3e34629a1 592 SUPERFAMILY SSF47384 347 420 2.55E-8 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 SUPERFAMILY SSF100950 67 228 5.69E-29 T 06-07-2017 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 Pfam PF00455 DeoR C terminal sensor domain 69 226 2.2E-46 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 5.3E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 SMART SM00420 4 56 2.5E-23 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 SMART SM01134 67 227 8.3E-62 T 06-07-2017 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 Gene3D G3DSA:1.10.10.10 1 50 2.9E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 Gene3D G3DSA:3.40.50.1360 69 206 3.8E-10 T 06-07-2017 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 9.1E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 9.1E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11270 0f95e77d971737a3376f752cf090ce58 250 SUPERFAMILY SSF46785 1 60 1.97E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.0E-101 T 06-07-2017 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 Gene3D G3DSA:3.20.20.70 1 215 1.8E-65 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 SUPERFAMILY SSF51569 1 218 1.15E-65 T 06-07-2017 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 49.984 T 06-07-2017 IPR023001 Fructose-6-phosphate aldolase GO:0016832 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 Pfam PF00923 Transaldolase 3 206 3.7E-47 T 06-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS22990 5c7af431a317f167cd0266f4b783728b 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 SUPERFAMILY SSF52021 3 142 4.71E-57 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.4E-5 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.4E-5 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.4E-5 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.9E-50 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 Gene3D G3DSA:3.40.50.880 154 378 4.8E-86 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.848 T 06-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 SMART SM01097 3 133 4.4E-91 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 3.4E-40 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 3.4E-40 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 3.4E-40 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 3.4E-40 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 3.4E-40 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.9E-52 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 Gene3D G3DSA:3.50.30.20 4 147 2.5E-63 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.0E-152 T 06-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.2E-11 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.2E-11 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.2E-11 T 06-07-2017 LFZ55_RS20060 a6e02ed22b420b6fb8c7a7b4beb7c7e1 382 SUPERFAMILY SSF52317 153 378 2.22E-64 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS19405 ab6b92d7bbe58f48b5bd5de4aa7122fb 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS19405 ab6b92d7bbe58f48b5bd5de4aa7122fb 265 Pfam PF00005 ABC transporter 27 176 3.7E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS19405 ab6b92d7bbe58f48b5bd5de4aa7122fb 265 Gene3D G3DSA:3.40.50.300 14 241 9.8E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19405 ab6b92d7bbe58f48b5bd5de4aa7122fb 265 SMART SM00382 36 224 3.6E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS19405 ab6b92d7bbe58f48b5bd5de4aa7122fb 265 SUPERFAMILY SSF52540 13 239 2.0E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02850 13d7d0af9fd1b76a7c6120bf2495dcf5 167 Gene3D G3DSA:3.40.630.30 17 128 3.4E-19 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS02850 13d7d0af9fd1b76a7c6120bf2495dcf5 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 123 2.3E-10 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS02850 13d7d0af9fd1b76a7c6120bf2495dcf5 167 SUPERFAMILY SSF55729 1 159 7.09E-25 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS07295 c52c2b79d152b2b24c09fcbdd7f2f3b3 311 Pfam PF01226 Formate/nitrite transporter 43 279 5.9E-40 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LFZ55_RS07295 c52c2b79d152b2b24c09fcbdd7f2f3b3 311 Gene3D G3DSA:1.20.1080.10 57 284 1.2E-46 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 Gene3D G3DSA:1.10.240.10 207 298 8.0E-32 T 06-07-2017 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 1.0E-19 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 1.0E-19 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 146 167 1.0E-19 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 1.0E-19 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 331 5.2E-68 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 SUPERFAMILY SSF52374 6 331 7.5E-76 T 06-07-2017 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 Pfam PF00579 tRNA synthetases class I (W and Y) 6 285 3.5E-47 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 Gene3D G3DSA:3.40.50.620 5 206 1.9E-67 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20700 76ac395dee83eea9d74a9eddca17edfe 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 SMART SM00842 10 196 3.0E-96 T 06-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.547 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.6E-161 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Gene3D G3DSA:3.90.640.10 235 297 4.3E-18 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Gene3D G3DSA:3.30.420.40 6 138 2.1E-33 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Gene3D G3DSA:3.30.420.40 169 209 1.5E-6 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 SUPERFAMILY SSF53067 198 384 1.91E-47 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Pfam PF14450 Cell division protein FtsA 207 381 9.4E-25 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 SUPERFAMILY SSF53067 8 221 6.15E-61 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 PIRSF PIRSF003101 2 420 1.3E-152 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Gene3D G3DSA:3.30.420.40 210 234 1.6E-29 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Gene3D G3DSA:3.30.420.40 298 359 1.6E-29 T 06-07-2017 LFZ55_RS19715 57df5feed18e2a4cbce944ca9b94acdc 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.4E-30 T 06-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LFZ55_RS08860 1d6014cc00f2d3a409faff578f90be28 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.6E-77 T 06-07-2017 IPR006062 Histidine biosynthesis GO:0000105 LFZ55_RS08860 1d6014cc00f2d3a409faff578f90be28 258 Gene3D G3DSA:3.20.20.70 4 257 1.6E-86 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS08860 1d6014cc00f2d3a409faff578f90be28 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.526 T 06-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 LFZ55_RS08860 1d6014cc00f2d3a409faff578f90be28 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.4E-115 T 06-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 LFZ55_RS08860 1d6014cc00f2d3a409faff578f90be28 258 SUPERFAMILY SSF51366 1 257 2.67E-72 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS04540 33652784c9f68f17905a4fb36072e0a2 366 SUPERFAMILY SSF53335 184 296 1.84E-13 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04540 33652784c9f68f17905a4fb36072e0a2 366 Gene3D G3DSA:3.40.50.150 184 316 6.5E-15 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04540 33652784c9f68f17905a4fb36072e0a2 366 Pfam PF01728 FtsJ-like methyltransferase 186 280 1.6E-8 T 06-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LFZ55_RS04540 33652784c9f68f17905a4fb36072e0a2 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.946 T 06-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LFZ55_RS04540 33652784c9f68f17905a4fb36072e0a2 366 PIRSF PIRSF028774 1 360 6.5E-189 T 06-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 Gene3D G3DSA:3.40.50.620 20 305 2.1E-115 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.773 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 5.9E-198 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 Gene3D G3DSA:1.20.120.640 306 392 1.1E-29 T 06-07-2017 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.8E-145 T 06-07-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.9E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.9E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.9E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.9E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 Pfam PF09190 DALR domain 341 402 1.6E-23 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 SMART SM00840 341 402 5.2E-27 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 SUPERFAMILY SSF47323 316 460 9.42E-45 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17850 c1db885a73760e4d424d4f1ad1dbcaeb 461 SUPERFAMILY SSF52374 1 313 1.82E-105 T 06-07-2017 LFZ55_RS10805 e3419ea3743f4bd80b40eacfa1248d45 158 Pfam PF06841 T4-like virus tail tube protein gp19 20 154 4.4E-35 T 06-07-2017 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 LFZ55_RS10805 e3419ea3743f4bd80b40eacfa1248d45 158 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 17 156 1.2E-30 T 06-07-2017 IPR011747 Conserved hypothetical protein CHP02241 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.1E-62 T 06-07-2017 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 06-07-2017 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 SUPERFAMILY SSF54292 4 109 2.57E-35 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 2.4E-15 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 PRINTS PR00355 Adrenodoxin signature 42 52 8.5E-11 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 PRINTS PR00355 Adrenodoxin signature 60 74 8.5E-11 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 PRINTS PR00355 Adrenodoxin signature 83 91 8.5E-11 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 LFZ55_RS06190 ddd95f560632d6c3c7486db5b3d0cbc8 111 Gene3D G3DSA:3.10.20.30 5 108 5.8E-37 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 SUPERFAMILY SSF52156 669 798 2.22E-37 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 316 366 7.0E-15 T 06-07-2017 IPR006847 Translation initiation factor IF-2, N-terminal LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 8.0E-8 T 06-07-2017 IPR006847 Translation initiation factor IF-2, N-terminal LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Gene3D G3DSA:3.40.50.10050 692 770 2.9E-24 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 4.9E-16 T 06-07-2017 IPR013575 Initiation factor 2 associated domain, bacterial LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.628 T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 308 891 4.0E-297 T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Pfam PF11987 Translation-initiation factor 2 676 781 1.9E-36 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 SUPERFAMILY SSF50447 793 889 4.12E-34 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 SUPERFAMILY SSF50447 565 646 1.94E-22 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 SUPERFAMILY SSF46955 3 50 9.52E-12 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Gene3D G3DSA:3.30.56.50 2 50 7.1E-23 T 06-07-2017 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Gene3D G3DSA:3.40.50.300 391 551 3.5E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 SUPERFAMILY SSF52540 391 559 7.46E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Gene3D G3DSA:2.40.30.10 793 889 7.6E-40 T 06-07-2017 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Gene3D G3DSA:2.40.30.10 565 655 1.7E-20 T 06-07-2017 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 Pfam PF00009 Elongation factor Tu GTP binding domain 396 552 2.5E-35 T 06-07-2017 LFZ55_RS02790 32e097a1a13762224166f4c5848baca4 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 395 550 5.7E-34 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 PIRSF PIRSF036407 1 346 1.9E-115 T 06-07-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 3.4E-132 T 06-07-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 3.3E-29 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 SUPERFAMILY SSF56042 164 340 3.74E-50 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 Gene3D G3DSA:3.30.1330.10 29 162 9.0E-32 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.845 T 06-07-2017 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 Gene3D G3DSA:3.90.650.10 176 344 3.5E-18 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 SUPERFAMILY SSF55326 7 161 1.48E-40 T 06-07-2017 LFZ55_RS13705 cc077c67e06551bf1f3e5985c303f6c4 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 2.6E-18 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 Pfam PF13533 Biotin-lipoyl like 55 104 4.4E-17 T 06-07-2017 LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 SUPERFAMILY SSF111369 55 236 5.23E-24 T 06-07-2017 LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 239 2.1E-37 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 Gene3D G3DSA:2.40.50.100 55 89 1.8E-20 T 06-07-2017 LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 Gene3D G3DSA:2.40.50.100 163 196 1.8E-20 T 06-07-2017 LFZ55_RS13005 4300ecd4c4ae34203258857738cb58ff 298 Pfam PF13437 HlyD family secretion protein 166 244 1.2E-7 T 06-07-2017 LFZ55_RS23480 a2821a70a50d3155a95e9afa99473646 194 Pfam PF12804 MobA-like NTP transferase domain 9 159 3.2E-35 T 06-07-2017 IPR025877 MobA-like NTP transferase LFZ55_RS23480 a2821a70a50d3155a95e9afa99473646 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 188 2.6E-72 T 06-07-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LFZ55_RS23480 a2821a70a50d3155a95e9afa99473646 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.815 T 06-07-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LFZ55_RS23480 a2821a70a50d3155a95e9afa99473646 194 SUPERFAMILY SSF53448 7 187 9.01E-36 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS23480 a2821a70a50d3155a95e9afa99473646 194 Gene3D G3DSA:3.90.550.10 6 192 3.2E-60 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 Gene3D G3DSA:1.20.1250.20 29 208 2.2E-27 T 06-07-2017 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 Gene3D G3DSA:1.20.1250.20 256 458 1.5E-18 T 06-07-2017 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 PRINTS PR00171 Sugar transporter signature 362 383 2.9E-19 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 PRINTS PR00171 Sugar transporter signature 33 43 2.9E-19 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 PRINTS PR00171 Sugar transporter signature 269 279 2.9E-19 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 PRINTS PR00171 Sugar transporter signature 116 135 2.9E-19 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 PRINTS PR00171 Sugar transporter signature 385 397 2.9E-19 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 Pfam PF00083 Sugar (and other) transporter 26 460 6.3E-132 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 457 9.2E-146 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS04340 6ac7afc1418a698f414c18407c705058 472 SUPERFAMILY SSF103473 15 459 5.36E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 SUPERFAMILY SSF74653 154 223 6.41E-20 T 06-07-2017 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 4.0E-39 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 196 213 4.0E-39 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 156 177 4.0E-39 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 177 195 4.0E-39 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 Pfam PF16031 TonB N-terminal region 33 158 3.8E-34 T 06-07-2017 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 162 233 2.1E-19 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 161 230 2.6E-17 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 LFZ55_RS11085 4ee46d58eb682a00f6ffbbc6069580b3 240 Gene3D G3DSA:3.30.1150.10 128 235 2.2E-10 T 06-07-2017 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Gene3D G3DSA:1.20.5.100 49 91 4.0E-25 T 06-07-2017 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 PIRSF PIRSF002799 6 836 0.0 T 06-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Gene3D G3DSA:1.10.3810.10 201 376 8.2E-63 T 06-07-2017 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 SUPERFAMILY SSF53955 192 398 1.88E-65 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Pfam PF14814 Bifunctional transglycosylase second domain 108 192 1.0E-26 T 06-07-2017 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Gene3D G3DSA:3.30.2060.10 106 195 1.9E-32 T 06-07-2017 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 74 8.6E-27 T 06-07-2017 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Gene3D G3DSA:3.40.710.10 377 795 3.6E-112 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 63 790 0.0 T 06-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Pfam PF00912 Transglycosylase 204 375 2.7E-54 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 SUPERFAMILY SSF56601 407 781 4.0E-106 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 SUPERFAMILY SSF56601 357 379 4.0E-106 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS19415 8b2fce968276e8d5c69361eabfdbaff9 838 Pfam PF00905 Penicillin binding protein transpeptidase domain 468 711 1.1E-25 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 SUPERFAMILY SSF52540 4 50 2.18E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 SUPERFAMILY SSF52540 284 506 2.18E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 Gene3D G3DSA:3.40.50.300 1 206 1.9E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 3.4E-169 T 06-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 510 4.0E-18 T 06-07-2017 IPR003395 RecF/RecN/SMC, N-terminal LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 PIRSF PIRSF003128 1 553 4.1E-157 T 06-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 Gene3D G3DSA:3.40.50.300 373 381 1.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 Gene3D G3DSA:3.40.50.300 431 496 1.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05745 5a1e1fc9aa478d523e8cd8ab27503e05 553 SUPERFAMILY SSF52540 1 217 1.65E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 3.7E-8 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 3.7E-8 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.7E-8 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 SUPERFAMILY SSF51905 6 345 1.8E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 Gene3D G3DSA:3.50.50.60 184 353 5.1E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 Gene3D G3DSA:3.50.50.60 6 183 1.8E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.6E-15 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-15 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-15 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-15 T 06-07-2017 LFZ55_RS14210 9280e79513dfffec6bdd80ff9368326f 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 3.4E-71 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 Gene3D G3DSA:3.40.50.720 3 263 1.6E-68 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 54.923 T 06-07-2017 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 Gene3D G3DSA:1.10.1040.10 272 482 5.1E-65 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 6.6E-39 T 06-07-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 SUPERFAMILY SSF48179 273 482 1.02E-50 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 455 1.1E-73 T 06-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LFZ55_RS12530 a75d07f77fe31d27a46fc1f9d7c0ceda 483 SUPERFAMILY SSF51735 3 264 5.51E-67 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08170 cf3ccac75b54a8ee55670227a0cbd18c 239 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 3 235 42.391 T 06-07-2017 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 LFZ55_RS08170 cf3ccac75b54a8ee55670227a0cbd18c 239 SMART SM00014 96 212 2.2E-20 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS08170 cf3ccac75b54a8ee55670227a0cbd18c 239 SUPERFAMILY SSF48317 2 223 1.19E-37 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS08170 cf3ccac75b54a8ee55670227a0cbd18c 239 Gene3D G3DSA:1.20.144.10 25 208 2.8E-11 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS08170 cf3ccac75b54a8ee55670227a0cbd18c 239 Pfam PF01569 PAP2 superfamily 138 213 2.5E-8 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 SUPERFAMILY SSF52374 10 337 3.66E-103 T 06-07-2017 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:3.40.50.620 27 96 4.2E-43 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:3.40.50.620 212 262 4.2E-43 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 5.1E-128 T 06-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:3.90.800.10 101 209 6.0E-48 T 06-07-2017 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:2.40.240.10 348 462 3.4E-50 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.2E-64 T 06-07-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:2.40.240.10 463 548 4.1E-34 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 0.0 T 06-07-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.971 T 06-07-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 SUPERFAMILY SSF50715 340 548 1.78E-80 T 06-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS17175 e8c9ff145d1e8ce019b7b17ef153c8e4 555 Gene3D G3DSA:1.10.1160.10 263 338 6.2E-39 T 06-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.8E-19 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 422 4.2E-24 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 SMART SM00941 350 424 1.7E-28 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 SUPERFAMILY SSF52418 74 334 7.06E-89 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 PIRSF PIRSF000478 1 439 4.7E-152 T 06-07-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.3E-168 T 06-07-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 SUPERFAMILY SSF54680 337 439 2.62E-31 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 54.173 T 06-07-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 2.8E-235 T 06-07-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Gene3D G3DSA:3.40.1030.10 75 337 2.0E-110 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 SUPERFAMILY SSF47648 3 70 1.3E-21 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 5.0E-53 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Gene3D G3DSA:3.90.1170.30 338 432 2.7E-35 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 Gene3D G3DSA:1.20.970.10 2 68 6.3E-30 T 06-07-2017 LFZ55_RS20445 a278895276a1c966b7f87b82f4460c29 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 06-07-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 3.0E-97 T 06-07-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 Gene3D G3DSA:3.30.420.10 7 185 1.4E-64 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 SUPERFAMILY SSF53098 7 184 2.45E-52 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 SMART SM00479 7 184 7.0E-51 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 7.7E-95 T 06-07-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19080 3d1c14e4ed92d283100babeca6ac7c77 243 Pfam PF00929 Exonuclease 9 175 1.5E-39 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Pfam PF00501 AMP-binding enzyme 233 619 2.5E-67 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Gene3D G3DSA:3.30.300.30 617 712 1.5E-8 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 SUPERFAMILY SSF56801 199 712 1.7E-96 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Gene3D G3DSA:3.40.1130.10 25 143 1.5E-4 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 SUPERFAMILY SSF69593 6 171 2.35E-19 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Pfam PF01553 Acyltransferase 16 137 2.4E-17 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Gene3D G3DSA:2.30.38.10 534 613 3.0E-13 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Gene3D G3DSA:3.40.50.980 376 533 4.0E-41 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 SMART SM00563 30 140 2.4E-27 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Gene3D G3DSA:3.40.50.980 233 375 3.6E-17 T 06-07-2017 LFZ55_RS04375 de50b621cb47fa1306ab64d3e69615a5 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.028 T 06-07-2017 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Gene3D G3DSA:3.40.630.10 316 373 2.1E-74 T 06-07-2017 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Gene3D G3DSA:3.40.630.10 5 187 2.1E-74 T 06-07-2017 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.2E-25 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.357 T 06-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 SUPERFAMILY SSF53187 292 373 1.76E-64 T 06-07-2017 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 SUPERFAMILY SSF53187 5 178 1.76E-64 T 06-07-2017 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.6E-44 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 Gene3D G3DSA:3.30.70.360 188 288 1.6E-35 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 SUPERFAMILY SSF55031 179 286 1.94E-30 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS06820 0e4636a812946aa09d49b12c9e0b7c5c 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 5.5E-175 T 06-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 Pfam PF00202 Aminotransferase class-III 32 397 2.6E-78 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 Gene3D G3DSA:3.40.640.10 70 315 1.5E-82 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.445 T 06-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 5.7E-204 T 06-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 Gene3D G3DSA:3.90.1150.10 319 424 3.8E-46 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 Gene3D G3DSA:3.90.1150.10 2 69 3.8E-46 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS19390 34798dfbb778e4fdd107fd5ceed62738 426 SUPERFAMILY SSF53383 2 424 3.7E-137 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 SUPERFAMILY SSF51905 1 296 2.92E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 132 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 4.7E-49 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 434 1.5E-26 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PIRSF PIRSF000350 1 438 1.8E-88 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 1.7E-25 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.7E-25 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.7E-25 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-25 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.7E-25 T 06-07-2017 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 SUPERFAMILY SSF55424 324 437 4.47E-31 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 Gene3D G3DSA:3.50.50.60 2 125 4.4E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 Gene3D G3DSA:3.30.390.30 318 437 3.9E-34 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 9.0E-56 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17745 505ba608d48813cd8720a34c2c6cd563 441 Gene3D G3DSA:3.50.50.60 126 316 1.4E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 Pfam PF02016 LD-carboxypeptidase 6 285 1.0E-67 T 06-07-2017 IPR003507 Peptidase family S66 LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 PIRSF PIRSF028757 1 300 1.9E-84 T 06-07-2017 IPR003507 Peptidase family S66 LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 SUPERFAMILY SSF141986 139 288 2.88E-41 T 06-07-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 Gene3D G3DSA:3.50.30.60 167 292 2.6E-43 T 06-07-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 Gene3D G3DSA:3.40.50.10740 5 160 1.0E-41 T 06-07-2017 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain LFZ55_RS10540 4580bbba6ffd3315bcb3a846895488bf 304 SUPERFAMILY SSF52317 5 160 1.28E-33 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.1E-51 T 06-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 SUPERFAMILY SSF54862 33 153 5.02E-29 T 06-07-2017 LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.945 T 06-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07665 fc9d19701673c7829fe261814a488482 180 Gene3D G3DSA:3.30.70.20 27 117 9.7E-19 T 06-07-2017 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 5.7E-13 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.9E-5 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.9E-5 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 Gene3D G3DSA:1.10.10.60 4 53 3.0E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 SUPERFAMILY SSF48498 91 219 2.13E-38 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 SUPERFAMILY SSF46689 4 82 2.05E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 Gene3D G3DSA:1.10.357.10 54 222 9.4E-75 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS16525 984e83a9b7cb36a6d82946de52000a45 224 Pfam PF09209 Domain of unknown function (DUF1956) 96 218 4.4E-36 T 06-07-2017 IPR015292 Transcription regulator YbiH, C-terminal LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 SUPERFAMILY SSF54826 3 138 4.57E-56 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 SMART SM01193 4 134 1.7E-92 T 06-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 Gene3D G3DSA:3.20.20.120 128 429 5.9E-138 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 06-07-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 Gene3D G3DSA:3.30.390.10 3 127 6.6E-54 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.9E-142 T 06-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 Hamap MF_00318 Enolase [eno]. 2 416 44.323 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 9.3E-206 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 SMART SM01192 143 430 2.3E-215 T 06-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 SUPERFAMILY SSF51604 143 427 6.93E-129 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 Pfam PF03952 Enolase, N-terminal domain 4 134 8.3E-58 T 06-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04675 ed3eb0e6771a78acf308aa4cfbe57a6e 432 PIRSF PIRSF001400 1 430 7.3E-193 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.457 T 06-07-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 Gene3D G3DSA:1.10.287.110 1 78 2.4E-27 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 SMART SM00271 1 66 2.5E-8 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 161 1.2E-16 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 Gene3D G3DSA:1.20.1280.20 81 170 1.5E-29 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 5.6E-62 T 06-07-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 SUPERFAMILY SSF47144 77 170 1.12E-23 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 LFZ55_RS06180 a20610592755d8e2e7bb2b26555ca4a8 171 SUPERFAMILY SSF46565 1 75 7.33E-18 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS10885 13966687c9fb2e1a23d8f74eaa0d77e6 129 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 3.7E-37 T 06-07-2017 IPR007360 Invasion gene expression up-regulator, SirB LFZ55_RS10885 13966687c9fb2e1a23d8f74eaa0d77e6 129 PIRSF PIRSF005610 1 124 5.7E-21 T 06-07-2017 IPR007360 Invasion gene expression up-regulator, SirB LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 Gene3D G3DSA:1.10.10.10 364 411 5.1E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 Pfam PF02661 Fic/DOC family 177 282 1.5E-19 T 06-07-2017 IPR003812 Fido domain LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 SUPERFAMILY SSF140931 156 344 2.88E-27 T 06-07-2017 IPR003812 Fido domain LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 Pfam PF08220 DeoR-like helix-turn-helix domain 387 414 9.3E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 Gene3D G3DSA:1.10.3290.10 119 351 1.5E-45 T 06-07-2017 IPR003812 Fido domain LFZ55_RS20885 9c1588e02834be2550ab31e6f0a1dd7d 432 SUPERFAMILY SSF46785 375 417 6.34E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00585 811033db5673fa16755bd347828f2cb5 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 9.0E-50 T 06-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 LFZ55_RS00585 811033db5673fa16755bd347828f2cb5 151 SUPERFAMILY SSF51283 1 150 8.77E-55 T 06-07-2017 IPR029054 dUTPase-like LFZ55_RS00585 811033db5673fa16755bd347828f2cb5 151 Pfam PF00692 dUTPase 16 149 1.6E-44 T 06-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LFZ55_RS00585 811033db5673fa16755bd347828f2cb5 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.478 T 06-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 LFZ55_RS00585 811033db5673fa16755bd347828f2cb5 151 Gene3D G3DSA:2.70.40.10 5 150 1.7E-53 T 06-07-2017 IPR029054 dUTPase-like LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 06-07-2017 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 56.061 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 5 539 4.1E-293 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 Gene3D G3DSA:3.90.228.20 227 289 1.4E-121 T 06-07-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 Gene3D G3DSA:3.90.228.20 350 538 1.4E-121 T 06-07-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 SUPERFAMILY SSF53795 228 539 6.15E-131 T 06-07-2017 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 2.1E-212 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 Gene3D G3DSA:3.40.449.10 21 226 2.7E-89 T 06-07-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 PIRSF PIRSF006294 2 539 4.3E-234 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LFZ55_RS01685 0d79dc0e627dd8276cc9b3cfefd957ed 539 SUPERFAMILY SSF68923 8 226 1.05E-91 T 06-07-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 SUPERFAMILY SSF46785 1 109 3.43E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 SUPERFAMILY SSF53850 86 288 1.3E-40 T 06-07-2017 LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 Gene3D G3DSA:3.40.190.10 195 242 5.7E-6 T 06-07-2017 LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 Gene3D G3DSA:1.10.10.10 1 82 1.2E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 Pfam PF03466 LysR substrate binding domain 85 286 7.8E-47 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-16 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS12550 52ed55ff3b63e218fbfb18e2e4541907 290 Gene3D G3DSA:3.40.190.10 83 194 1.3E-24 T 06-07-2017 LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 Gene3D G3DSA:1.10.10.10 1 134 1.6E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 06-07-2017 IPR030489 Transcription regulator Rrf2-type, conserved site LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-46 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 SUPERFAMILY SSF46785 2 133 9.6E-36 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 46.756 T 06-07-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 Pfam PF02082 Transcriptional regulator 1 83 5.2E-27 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS06160 3f4e9d869031be3775d5a1687dffaf8c 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.5E-66 T 06-07-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 SUPERFAMILY SSF53671 2 333 2.75E-97 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.391 T 06-07-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.2E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 3.2E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.2E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.2E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.3E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.3E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.3E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.3E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.3E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 147 2.3E-46 T 06-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.2E-136 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.4E-54 T 06-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 Gene3D G3DSA:3.40.50.1370 144 319 2.0E-74 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21250 89bfeb824d23dd42124cf52c6d8baa80 334 Gene3D G3DSA:3.40.50.1370 4 143 8.4E-57 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS04550 9eb6062f916d1a9570ddf195a7c32a54 140 Gene3D G3DSA:3.40.1650.10 1 139 9.2E-49 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS04550 9eb6062f916d1a9570ddf195a7c32a54 140 Pfam PF05025 RbsD / FucU transport protein family 4 139 3.2E-34 T 06-07-2017 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS04550 9eb6062f916d1a9570ddf195a7c32a54 140 SUPERFAMILY SSF102546 1 139 3.27E-38 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS04550 9eb6062f916d1a9570ddf195a7c32a54 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 45.875 T 06-07-2017 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.6E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.6E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.6E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 Gene3D G3DSA:3.40.50.720 3 245 6.9E-76 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 5.7E-60 T 06-07-2017 LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 SUPERFAMILY SSF51735 3 245 1.59E-74 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08410 10c1459dedcbac94c63ccfb917e89031 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.4E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 3.1E-116 T 06-07-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 Pfam PF01694 Rhomboid family 131 267 4.5E-30 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 4.0E-29 T 06-07-2017 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 276 48.125 T 06-07-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 Gene3D G3DSA:1.20.1540.10 94 267 1.6E-38 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LFZ55_RS01595 52cdb58104fbb21d9f32ff403d169179 276 SUPERFAMILY SSF144091 92 267 1.7E-44 T 06-07-2017 LFZ55_RS13385 a6b0c07b2e88938987b87d75eb9ae24a 75 Pfam PF15930 Domain of unknown function 14 75 1.9E-40 T 06-07-2017 IPR031830 Uncharacterised protein YdiH LFZ55_RS17825 2765f052869aa83ace56209a468b4b15 177 SUPERFAMILY SSF49401 29 176 1.14E-27 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS17825 2765f052869aa83ace56209a468b4b15 177 Pfam PF00419 Fimbrial protein 30 176 1.3E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS17825 2765f052869aa83ace56209a468b4b15 177 Gene3D G3DSA:2.60.40.1090 27 176 6.8E-27 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 SUPERFAMILY SSF49584 144 235 6.28E-9 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 150 8.8E-32 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 PRINTS PR00969 Pili chaperone signature 132 147 5.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 PRINTS PR00969 Pili chaperone signature 168 183 5.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 PRINTS PR00969 Pili chaperone signature 110 127 5.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 PRINTS PR00969 Pili chaperone signature 36 45 5.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 PRINTS PR00969 Pili chaperone signature 82 103 5.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 Gene3D G3DSA:2.60.40.360 36 150 1.0E-35 T 06-07-2017 IPR008962 PapD-like LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 Gene3D G3DSA:2.60.40.1070 155 236 3.4E-4 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS21975 e5b5a268e6ba48142babfd1be75f9543 262 SUPERFAMILY SSF49354 30 150 1.85E-34 T 06-07-2017 IPR008962 PapD-like LFZ55_RS01495 2506e6f173693b573e49e4ce09078d7d 344 SUPERFAMILY SSF51556 3 42 3.02E-70 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS01495 2506e6f173693b573e49e4ce09078d7d 344 SUPERFAMILY SSF51556 69 343 3.02E-70 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS01495 2506e6f173693b573e49e4ce09078d7d 344 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 18 26 - T 06-07-2017 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 LFZ55_RS01495 2506e6f173693b573e49e4ce09078d7d 344 Gene3D G3DSA:3.20.20.140 4 343 1.6E-96 T 06-07-2017 LFZ55_RS01495 2506e6f173693b573e49e4ce09078d7d 344 Pfam PF02126 Phosphotriesterase family 13 343 7.2E-48 T 06-07-2017 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 2.5E-108 T 06-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 Pfam PF05175 Methyltransferase small domain 132 215 4.5E-16 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 Gene3D G3DSA:1.10.8.10 15 106 2.9E-7 T 06-07-2017 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 Gene3D G3DSA:3.40.50.150 108 296 8.6E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 PIRSF PIRSF037167 1 307 1.8E-151 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 3.3E-140 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 SUPERFAMILY SSF53335 15 294 8.14E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07335 a4af7a798a6e098c983a34112385cb0c 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.564 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 SMART SM00342 177 259 3.6E-25 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 SUPERFAMILY SSF46689 212 259 2.37E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 Gene3D G3DSA:1.10.10.60 211 259 2.2E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 Pfam PF12833 Helix-turn-helix domain 183 259 6.7E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 SUPERFAMILY SSF51215 14 146 1.96E-6 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 255 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 2.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 2.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS15490 34200786a1b69a174f78c0ca118c88fc 259 Gene3D G3DSA:2.60.120.10 29 70 6.4E-4 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.1560 6489 6565 8.6E-4 T 06-07-2017 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.1560 6209 6283 2.7E-9 T 06-07-2017 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 2852 2914 8.4E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 4847 4907 3.29E-7 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 1856 1913 4.4E-4 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 4847 4901 2.6E-5 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 3052 3109 1.0E-5 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 3849 3908 4.4E-4 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 4248 4305 2.8E-4 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Gene3D G3DSA:2.60.40.650 3650 3709 5.3E-4 T 06-07-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7224 7253 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 4784 4803 0.37 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7121 7150 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 6444 6468 0.22 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5177 5201 1.4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7430 7459 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 4185 4212 0.27 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 1391 1418 0.028 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 2185 2218 1.5E-4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5079 5107 0.5 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 4982 5011 2.1E-4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7327 7356 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5575 5602 0.22 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5471 5499 3.2 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 4081 4100 0.012 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 6347 6381 2.1E-6 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7945 7974 1.0E-4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5868 5900 2.0 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 6541 6569 0.79 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7739 7768 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 3579 3608 0.026 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 6159 6184 0.045 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 3483 3504 0.92 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 3379 3414 0.0022 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 407 428 0.046 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 3180 3212 2.0E-4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 2989 3008 0.37 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7636 7665 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 2582 2617 0.071 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 2090 2108 1.9 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7842 7871 0.0011 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 5282 5309 0.043 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 1188 1219 0.023 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF12245 Bacterial Ig-like domain (group 3) 7533 7562 9.1E-4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 4647 4709 8.4E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 2254 2315 1.15E-6 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 2055 2117 2.24E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 4277 4405 0.0057 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 4480 4603 0.0041 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 1483 1614 7.5E-5 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 2285 2410 0.0026 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 1683 1813 0.0022 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 Pfam PF13750 Bacterial Ig-like domain (group 3) 2685 2808 0.0041 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 4049 4109 9.8E-6 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 4447 4509 2.59E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF50939 1261 1304 5.49E-11 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF50939 1457 1501 5.49E-11 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF50939 1163 1198 5.49E-11 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 3849 3910 1.54E-6 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 2453 2509 1.19E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 3650 3711 8.4E-7 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 1856 1917 9.8E-7 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 3052 3113 1.26E-7 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 4248 4305 7.0E-6 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 1657 1714 8.4E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 3450 3512 1.54E-6 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 2652 2714 2.59E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22380 68126aa1b39e29744b53d4aa60495402 8178 SUPERFAMILY SSF81296 3230 3311 7.0E-5 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Gene3D G3DSA:2.30.42.10 252 335 4.6E-22 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 SUPERFAMILY SSF50156 219 344 3.01E-16 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.2E-14 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 1.3E-40 T 06-07-2017 IPR020992 Tail specific protease, C-terminal LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Pfam PF03572 Peptidase family S41 356 529 9.3E-53 T 06-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 SMART SM00228 246 323 2.1E-10 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Gene3D G3DSA:3.90.226.10 336 533 9.5E-67 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Gene3D G3DSA:3.90.226.10 646 675 9.5E-67 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 SUPERFAMILY SSF52096 194 264 1.38E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 SUPERFAMILY SSF52096 350 537 1.38E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 4.6E-129 T 06-07-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 SMART SM00245 326 531 6.6E-80 T 06-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 LFZ55_RS10295 9a74f14c610e6738425fcb6f07ae0cbc 682 Gene3D G3DSA:3.30.750.44 199 251 7.3E-4 T 06-07-2017 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 2.4E-54 T 06-07-2017 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 SUPERFAMILY SSF50443 356 590 9.68E-127 T 06-07-2017 IPR004216 L-fucose/L-arabinose isomerase, C-terminal LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Gene3D G3DSA:3.40.50.1070 4 175 4.5E-97 T 06-07-2017 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 70.624 T 06-07-2017 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 06-07-2017 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 6.1E-81 T 06-07-2017 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Gene3D G3DSA:3.40.275.10 176 340 1.3E-79 T 06-07-2017 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 SUPERFAMILY SSF53743 2 355 4.97E-150 T 06-07-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 5.4E-83 T 06-07-2017 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04560 71b592389348233dba3ff55977ce5e5b 591 Gene3D G3DSA:3.20.14.10 341 590 6.3E-131 T 06-07-2017 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 SUPERFAMILY SSF100950 2 146 2.23E-46 T 06-07-2017 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 SUPERFAMILY SSF75445 127 198 3.53E-24 T 06-07-2017 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 Gene3D G3DSA:3.40.50.1360 1 136 4.2E-58 T 06-07-2017 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.1E-58 T 06-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 3.2E-71 T 06-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.67 T 06-07-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LFZ55_RS04040 06a189e6cd8a6da9fd7a17144f8e3bee 219 Gene3D G3DSA:3.30.70.260 137 196 3.2E-30 T 06-07-2017 LFZ55_RS12145 bfa4d581fe3ccede24b1bf915f1a9aa3 293 SUPERFAMILY SSF103481 191 291 3.14E-6 T 06-07-2017 LFZ55_RS12145 bfa4d581fe3ccede24b1bf915f1a9aa3 293 Pfam PF00892 EamA-like transporter family 6 137 9.5E-8 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS12145 bfa4d581fe3ccede24b1bf915f1a9aa3 293 Pfam PF00892 EamA-like transporter family 158 285 1.2E-9 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS12145 bfa4d581fe3ccede24b1bf915f1a9aa3 293 SUPERFAMILY SSF103481 50 140 5.49E-6 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 SUPERFAMILY SSF100934 507 602 3.01E-30 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 SUPERFAMILY SSF53067 187 382 1.17E-68 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Pfam PF00012 Hsp70 protein 4 602 2.2E-268 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 SUPERFAMILY SSF53067 4 183 2.59E-65 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.133 T 06-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.90.640.10 230 315 5.9E-32 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 7.6E-294 T 06-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 SUPERFAMILY SSF100920 384 539 8.11E-62 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.30.420.40 319 361 2.5E-33 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.30.420.40 196 229 2.5E-33 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.2E-81 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:2.60.34.10 390 531 3.5E-71 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:1.20.1270.10 532 601 1.2E-28 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.30.420.40 119 195 1.8E-63 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.30.420.40 4 52 1.8E-63 T 06-07-2017 LFZ55_RS20260 65be347f4a81b8fd7393db0e32efaf1b 638 Gene3D G3DSA:3.30.30.30 53 107 4.7E-27 T 06-07-2017 LFZ55_RS17740 aa7a99e6c9e604ba17a195cb86fd25ee 78 Pfam PF07338 Protein of unknown function (DUF1471) 26 78 7.0E-14 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS17740 aa7a99e6c9e604ba17a195cb86fd25ee 78 Gene3D G3DSA:3.30.1660.10 12 78 4.8E-13 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS17740 aa7a99e6c9e604ba17a195cb86fd25ee 78 SUPERFAMILY SSF159871 3 78 1.06E-14 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 Gene3D G3DSA:2.60.40.1070 152 242 4.1E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 PRINTS PR00969 Pili chaperone signature 169 184 7.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 PRINTS PR00969 Pili chaperone signature 27 36 7.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 PRINTS PR00969 Pili chaperone signature 104 121 7.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 PRINTS PR00969 Pili chaperone signature 76 97 7.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 PRINTS PR00969 Pili chaperone signature 130 145 7.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 Gene3D G3DSA:2.60.40.360 27 148 2.6E-46 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 239 2.1E-11 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 SUPERFAMILY SSF49354 22 148 1.81E-44 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 SUPERFAMILY SSF49584 142 240 5.49E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18805 58019bda29a80d261b1287acfc21b773 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 148 3.6E-45 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 345 6.8E-146 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 Gene3D G3DSA:3.40.718.10 3 339 1.0E-135 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 SUPERFAMILY SSF53659 4 340 1.19E-103 T 06-07-2017 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 PIRSF PIRSF002465 2 343 2.5E-128 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 Pfam PF02504 Fatty acid synthesis protein 5 331 4.1E-127 T 06-07-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 LFZ55_RS14305 3b61b9bd2fe949fb44b1b822e9b5d2a7 359 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 141.79 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 Pfam PF12464 Maltose acetyltransferase 8 59 7.2E-13 T 06-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.2E-12 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 Gene3D G3DSA:2.160.10.10 5 190 2.8E-60 T 06-07-2017 LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 SMART SM01266 6 60 1.7E-15 T 06-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LFZ55_RS19535 caf8757ddc9a98633d319ea5faff1f8e 201 SUPERFAMILY SSF51161 5 196 1.66E-53 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Gene3D G3DSA:3.40.50.261 280 439 2.3E-13 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Gene3D G3DSA:3.40.50.720 2 127 1.8E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Gene3D G3DSA:3.40.630.30 718 877 2.5E-27 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Pfam PF00583 Acetyltransferase (GNAT) family 791 864 1.9E-10 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SUPERFAMILY SSF52210 287 447 5.63E-35 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SUPERFAMILY SSF56059 481 686 2.87E-26 T 06-07-2017 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Pfam PF13380 CoA binding domain 13 129 1.7E-21 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SUPERFAMILY SSF52210 125 286 2.62E-35 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Pfam PF13549 ATP-grasp domain 472 694 1.9E-73 T 06-07-2017 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SUPERFAMILY SSF55729 706 866 9.43E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SUPERFAMILY SSF51735 2 136 7.0E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 SMART SM00881 9 104 6.0E-24 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Gene3D G3DSA:3.40.50.261 128 279 3.3E-24 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 4.0E-46 T 06-07-2017 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain LFZ55_RS05900 276a9140cae469ebd2bc2405a1fd7247 886 Gene3D G3DSA:3.30.470.20 489 589 8.2E-4 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.1E-15 T 06-07-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SUPERFAMILY SSF54862 665 838 5.44E-23 T 06-07-2017 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:4.10.780.10 628 668 7.9E-21 T 06-07-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 1.4E-32 T 06-07-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 06-07-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:3.40.50.970 796 1165 3.6E-125 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 1.1E-7 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:3.40.50.970 1 254 8.3E-112 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SUPERFAMILY SSF53323 419 668 7.06E-74 T 06-07-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:3.40.920.10 418 619 3.4E-76 T 06-07-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SMART SM00890 622 679 1.2E-29 T 06-07-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:1.10.1060.10 669 772 1.8E-21 T 06-07-2017 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.2E-9 T 06-07-2017 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 PIRSF PIRSF000159 1 1174 0.0 T 06-07-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SUPERFAMILY SSF52518 2 254 1.37E-72 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SUPERFAMILY SSF52518 794 1162 3.48E-117 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 244 2.1E-82 T 06-07-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Pfam PF10371 Domain of unknown function 626 678 5.9E-23 T 06-07-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 SUPERFAMILY SSF52922 256 411 2.0E-42 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS11655 b957588696302e5cbad9a4f39c4f01ce 1174 Gene3D G3DSA:3.40.50.920 255 412 1.4E-61 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Gene3D G3DSA:3.20.70.20 136 344 8.6E-44 T 06-07-2017 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Gene3D G3DSA:3.20.70.20 398 559 8.6E-44 T 06-07-2017 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Gene3D G3DSA:3.20.70.20 610 700 8.6E-44 T 06-07-2017 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 SUPERFAMILY SSF51998 222 740 9.77E-171 T 06-07-2017 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Pfam PF03477 ATP cone domain 6 92 1.6E-15 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.8E-12 T 06-07-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 5.4E-39 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 SUPERFAMILY SSF48168 10 221 3.53E-74 T 06-07-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.5E-181 T 06-07-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07855 48a08109a2a1d277b8d60be9c577bdf5 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 8.4E-120 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 06-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 2.8E-134 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 06-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 SUPERFAMILY SSF53901 297 434 5.6E-33 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 73.613 T 06-07-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 2.9E-264 T 06-07-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Gene3D G3DSA:3.40.47.10 221 300 1.5E-50 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Gene3D G3DSA:3.40.47.10 15 134 1.5E-50 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 06-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 2.1E-59 T 06-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Gene3D G3DSA:3.40.47.10 175 220 3.9E-49 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Gene3D G3DSA:3.40.47.10 302 435 3.9E-49 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 PIRSF PIRSF000429 9 436 5.4E-126 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 SUPERFAMILY SSF53901 15 295 1.15E-61 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07315 75f05d4a2c5b0aae03b16b9c29fefcac 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.2E-36 T 06-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 SUPERFAMILY SSF103473 13 420 3.66E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 06-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 6.3E-150 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 Gene3D G3DSA:1.20.1250.20 231 392 8.7E-5 T 06-07-2017 LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 Gene3D G3DSA:1.20.1250.20 23 211 7.1E-11 T 06-07-2017 LFZ55_RS00490 f61f998de40454d4429257562ca76271 460 Pfam PF13347 MFS/sugar transport protein 13 428 3.1E-101 T 06-07-2017 LFZ55_RS09110 e7222edd1f04c0c6ba6126668685186f 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 240 1.2E-106 T 06-07-2017 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 LFZ55_RS09110 e7222edd1f04c0c6ba6126668685186f 241 SUPERFAMILY SSF53790 1 239 7.33E-57 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09110 e7222edd1f04c0c6ba6126668685186f 241 Gene3D G3DSA:3.30.950.10 113 224 3.4E-12 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09110 e7222edd1f04c0c6ba6126668685186f 241 Gene3D G3DSA:3.40.1010.10 1 112 1.8E-30 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09110 e7222edd1f04c0c6ba6126668685186f 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 2.3E-38 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 Gene3D G3DSA:2.30.40.10 304 339 9.5E-4 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 PIRSF PIRSF039004 1 375 1.1E-127 T 06-07-2017 IPR020043 Amidohydrolase EF0837/AHA3915, putative LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 Pfam PF01979 Amidohydrolase family 47 334 4.7E-8 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 3.7E-175 T 06-07-2017 IPR020043 Amidohydrolase EF0837/AHA3915, putative LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 SUPERFAMILY SSF51556 51 316 1.2E-69 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 Gene3D G3DSA:2.30.40.10 3 55 1.3E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 SUPERFAMILY SSF51338 317 365 5.62E-17 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 SUPERFAMILY SSF51338 1 51 5.62E-17 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS21370 9e766cc5d5c0ca87b5f0746de78372e3 377 Gene3D G3DSA:3.20.20.140 56 303 2.9E-114 T 06-07-2017 LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 SMART SM00493 81 166 5.8E-21 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 06-07-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 Pfam PF13662 Toprim domain 82 172 6.6E-24 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.564 T 06-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 SUPERFAMILY SSF111304 2 199 2.48E-72 T 06-07-2017 IPR023627 Recombination protein RecR LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 Pfam PF02132 RecR protein 41 77 1.6E-15 T 06-07-2017 IPR023628 Recombination protein RecR, C4-type zinc finger LFZ55_RS18020 5981cc9b68e665b73510206669a9e5fc 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 5.0E-83 T 06-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LFZ55_RS15770 938ed9a9c82aa17ee7da0259af3e7a66 319 ProDom PD040905 SECRETED SOPD SOP POSSIBLE HOMOLOGOUS FAMILY EFFECTOR THE TRANSFERRED VIRULENCE 1 319 2.0E-157 T 06-07-2017 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 LFZ55_RS15770 938ed9a9c82aa17ee7da0259af3e7a66 319 Pfam PF11047 Salmonella outer protein D 1 319 4.8E-175 T 06-07-2017 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 LFZ55_RS17410 cd0b7fe179932b879c388df4c10ec6d8 262 Gene3D G3DSA:3.60.110.10 3 256 5.1E-59 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17410 cd0b7fe179932b879c388df4c10ec6d8 262 SUPERFAMILY SSF56317 1 254 1.57E-55 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17410 cd0b7fe179932b879c388df4c10ec6d8 262 Pfam PF00795 Carbon-nitrogen hydrolase 15 245 6.5E-36 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17410 cd0b7fe179932b879c388df4c10ec6d8 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 06-07-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 SUPERFAMILY SSF55021 303 381 3.84E-23 T 06-07-2017 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Gene3D G3DSA:3.30.360.10 636 792 4.8E-55 T 06-07-2017 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.3E-150 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 SUPERFAMILY SSF51735 464 636 1.51E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 SUPERFAMILY SSF53633 1 295 7.72E-73 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 06-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.7E-31 T 06-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 PIRSF PIRSF000727 1 818 0.0 T 06-07-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Gene3D G3DSA:3.40.50.720 464 635 4.6E-66 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Pfam PF00696 Amino acid kinase family 2 284 1.8E-44 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Gene3D G3DSA:3.40.1160.10 1 49 1.8E-67 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Gene3D G3DSA:3.40.1160.10 111 299 1.8E-67 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Pfam PF13840 ACT domain 393 453 5.5E-9 T 06-07-2017 IPR027795 GATS-like ACT domain LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Pfam PF13840 ACT domain 314 374 3.0E-8 T 06-07-2017 IPR027795 GATS-like ACT domain LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 Pfam PF00742 Homoserine dehydrogenase 614 811 3.7E-47 T 06-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 SUPERFAMILY SSF55347 614 798 9.81E-51 T 06-07-2017 LFZ55_RS20320 f48167ed0d0046a2d870f4e4821ff0ec 820 SUPERFAMILY SSF55021 383 476 2.59E-22 T 06-07-2017 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 Gene3D G3DSA:3.10.20.10 40 125 1.4E-30 T 06-07-2017 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 SUPERFAMILY SSF53927 22 276 2.35E-79 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 Gene3D G3DSA:3.40.140.10 139 276 1.2E-48 T 06-07-2017 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 PIRSF PIRSF015626 5 278 2.6E-81 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 32.828 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 276 4.5E-97 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 LFZ55_RS23265 ba26df4c4a4e521008c95d3acd99111a 278 Pfam PF02634 FdhD/NarQ family 38 275 5.9E-70 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 LFZ55_RS21070 63cb6e96124b26cfebeefe03ffe5bd4e 506 Gene3D G3DSA:3.30.565.10 25 177 2.6E-10 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS21070 63cb6e96124b26cfebeefe03ffe5bd4e 506 SUPERFAMILY SSF55874 22 193 8.9E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS21070 63cb6e96124b26cfebeefe03ffe5bd4e 506 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 155 2.1E-21 T 06-07-2017 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 Gene3D G3DSA:3.40.366.10 197 298 7.7E-71 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 Gene3D G3DSA:3.40.366.10 3 122 7.7E-71 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 PIRSF PIRSF000446 1 309 7.8E-142 T 06-07-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 Pfam PF00698 Acyl transferase domain 6 282 5.3E-36 T 06-07-2017 IPR014043 Acyl transferase LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 SUPERFAMILY SSF52151 190 307 2.38E-80 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 SUPERFAMILY SSF52151 4 122 2.38E-80 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.8E-37 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 SUPERFAMILY SSF55048 128 197 5.62E-17 T 06-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 Gene3D G3DSA:3.30.70.250 125 196 1.3E-31 T 06-07-2017 LFZ55_RS14295 c9322fdfe5a356c6c2e31bee4b42dfeb 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.6E-132 T 06-07-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:3.40.228.10 175 356 2.4E-52 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 SUPERFAMILY SSF53706 44 568 6.02E-140 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 SUPERFAMILY SSF53706 599 617 6.02E-140 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Pfam PF01568 Molydopterin dinucleotide binding domain 637 746 4.1E-21 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:2.20.25.90 40 98 5.7E-16 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 SUPERFAMILY SSF50692 599 747 5.65E-30 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Pfam PF00384 Molybdopterin oxidoreductase 98 524 8.1E-97 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 1.8E-5 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 674 701 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:3.40.50.740 357 561 1.1E-56 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:3.40.50.740 99 174 1.1E-56 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:3.40.50.740 599 611 1.1E-56 T 06-07-2017 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 SMART SM00926 41 95 4.5E-9 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 6.3E-13 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 64 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 467 484 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS08920 517dd9a3a5b8980b0ed775b3a3f1332f 758 Gene3D G3DSA:2.40.40.20 626 754 9.2E-31 T 06-07-2017 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 Pfam PF08281 Sigma-70, region 4 129 180 4.4E-19 T 06-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 SUPERFAMILY SSF88946 2 104 3.77E-31 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 9.4E-31 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 Gene3D G3DSA:1.10.10.10 122 187 5.2E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 06-07-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 Pfam PF04542 Sigma-70 region 2 25 91 3.3E-17 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.4E-99 T 06-07-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 Gene3D G3DSA:1.10.1740.10 2 107 4.8E-37 T 06-07-2017 LFZ55_RS05955 9be067b8efd20257e45b777dc6ac22e9 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 SUPERFAMILY SSF54913 1 112 3.18E-42 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 SMART SM00938 4 105 1.2E-60 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.5E-41 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 PIRSF PIRSF039144 1 112 1.6E-52 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-40 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-40 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-40 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-40 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 06-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 06-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 LFZ55_RS18150 ff6674e1ea31c23b0239ba2ca479301b 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-47 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LFZ55_RS11520 bd126c9ef6c42ed5d9824281880ea662 537 Gene3D G3DSA:3.10.105.10 305 505 6.9E-64 T 06-07-2017 LFZ55_RS11520 bd126c9ef6c42ed5d9824281880ea662 537 Gene3D G3DSA:3.40.190.10 154 304 4.1E-47 T 06-07-2017 LFZ55_RS11520 bd126c9ef6c42ed5d9824281880ea662 537 SUPERFAMILY SSF53850 33 527 5.43E-138 T 06-07-2017 LFZ55_RS11520 bd126c9ef6c42ed5d9824281880ea662 537 PIRSF PIRSF002741 2 537 9.1E-111 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS11520 bd126c9ef6c42ed5d9824281880ea662 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 453 8.7E-86 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.704 T 06-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 SUPERFAMILY SSF51569 1 290 4.03E-98 T 06-07-2017 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 3.8E-37 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 SMART SM00917 369 500 1.4E-37 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 4.6E-254 T 06-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 06-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 Pfam PF00682 HMGL-like 4 273 7.6E-105 T 06-07-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 Gene3D G3DSA:3.20.20.70 1 347 9.0E-142 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 SUPERFAMILY SSF110921 391 499 4.45E-26 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS19820 48fbcecccf5c17d7adf5082fda13d36d 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 06-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 9.3E-49 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 4.3E-29 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 SUPERFAMILY SSF117143 93 222 9.42E-35 T 06-07-2017 LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 2.7E-117 T 06-07-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-14 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14370 306db6ff36b9dd58d6c21cbbbb12e03e 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 3.7E-26 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 Gene3D G3DSA:1.10.8.80 249 355 3.9E-30 T 06-07-2017 LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 Pfam PF12615 F sex factor protein N terminal 31 128 9.6E-31 T 06-07-2017 IPR022585 TraD coupling protein, N-terminal LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 SUPERFAMILY SSF52540 171 573 3.33E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 8.7E-117 T 06-07-2017 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 577 5.7E-257 T 06-07-2017 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 Gene3D G3DSA:3.40.50.300 364 569 1.6E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24815 fbc5a0d65389d912e0059033da4ae1e6 747 Gene3D G3DSA:3.40.50.300 132 248 1.6E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 Gene3D G3DSA:3.40.50.880 252 460 8.2E-38 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 447 5.5E-60 T 06-07-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 229 1.6E-30 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 SUPERFAMILY SSF52317 254 455 6.67E-40 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 189.072 T 06-07-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 Gene3D G3DSA:3.40.50.300 3 240 1.1E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 SUPERFAMILY SSF52540 1 228 8.24E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09150 4f940cb8f272585808f7a788be1eba11 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 494 3.0E-163 T 06-07-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 3 256 4.0E-87 T 06-07-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.2E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 7.2E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.2E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 7.2E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS13120 029a5c7875a53b6b252567f709d54d23 259 Pfam PF01311 Bacterial export proteins, family 1 10 241 1.5E-48 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS20090 722f6ad45f956990f224011103acd09a 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.984 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 LFZ55_RS20090 722f6ad45f956990f224011103acd09a 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.6E-99 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 LFZ55_RS20090 722f6ad45f956990f224011103acd09a 316 Pfam PF02401 LytB protein 3 282 4.6E-92 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 LFZ55_RS16135 5429a91dd86c06c927e12f691c3b1bc4 675 Pfam PF12571 Phage tail-collar fibre protein 1 159 3.6E-39 T 06-07-2017 IPR022225 Phage tail fibre protein LFZ55_RS16135 5429a91dd86c06c927e12f691c3b1bc4 675 Pfam PF03406 Phage tail fibre repeat 301 338 3.4E-20 T 06-07-2017 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Gene3D G3DSA:3.40.50.720 308 493 4.7E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 06-07-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 3.6E-42 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 06-07-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Gene3D G3DSA:1.10.1040.10 624 710 1.0E-20 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 1.9E-28 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 SUPERFAMILY SSF48179 614 706 5.19E-24 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 SUPERFAMILY SSF51735 309 489 1.53E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.793 T 06-07-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Gene3D G3DSA:3.90.226.10 6 204 3.8E-65 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Gene3D G3DSA:1.10.1040.10 494 586 1.6E-29 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 SUPERFAMILY SSF52096 5 299 9.67E-69 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 SUPERFAMILY SSF48179 492 595 9.35E-29 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS07320 4da192456dfe67cd1c984337b12cc10c 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 7.3E-58 T 06-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 1 131 27.659 T 06-07-2017 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 SUPERFAMILY SSF47598 1 43 1.22E-11 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 SUPERFAMILY SSF55021 53 132 3.89E-26 T 06-07-2017 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 Gene3D G3DSA:1.10.1220.10 1 46 2.8E-23 T 06-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 Pfam PF08753 NikR C terminal nickel binding domain 54 127 1.5E-27 T 06-07-2017 IPR014864 Transcription factor, NikR, nickel binding C-terminal LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.1E-11 T 06-07-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 Gene3D G3DSA:3.30.70.1150 50 132 9.4E-34 T 06-07-2017 LFZ55_RS01340 c3390ce3986ce28575690cfc36f7cd7f 133 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 2.4E-66 T 06-07-2017 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 SUPERFAMILY SSF53850 122 561 1.99E-56 T 06-07-2017 LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 Gene3D G3DSA:3.90.76.10 142 268 7.7E-18 T 06-07-2017 LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 Gene3D G3DSA:3.40.190.10 269 303 6.2E-4 T 06-07-2017 LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 Gene3D G3DSA:3.10.105.10 406 533 4.3E-4 T 06-07-2017 LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 1.5E-36 T 06-07-2017 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LFZ55_RS18180 b38f1eba610f903507f4699fb1a4b453 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 168 303 5.2E-15 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 7.2E-25 T 06-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 SUPERFAMILY SSF55874 5 215 7.03E-70 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.2E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.2E-59 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Gene3D G3DSA:3.30.230.10 217 390 8.8E-48 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 SUPERFAMILY SSF54211 217 382 3.6E-47 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 8.2E-159 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.432 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 SUPERFAMILY SSF56719 388 621 7.85E-78 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 SMART SM00433 34 624 3.6E-211 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Gene3D G3DSA:3.40.50.670 398 611 1.0E-76 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 06-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 SMART SM00387 27 173 4.9E-20 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Pfam PF00204 DNA gyrase B 218 384 5.5E-40 T 06-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03345 9424bf8024ab5d6ab22c2afc30728628 630 Gene3D G3DSA:3.30.565.10 15 215 7.9E-78 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 06-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.514 T 06-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SMART SM00889 487 609 4.5E-72 T 06-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Gene3D G3DSA:3.30.230.10 491 609 3.6E-46 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SUPERFAMILY SSF50447 271 411 9.5E-36 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Gene3D G3DSA:2.40.30.10 312 412 1.4E-38 T 06-07-2017 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 8.3E-33 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SUPERFAMILY SSF52540 6 288 8.92E-107 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 4.0E-16 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Pfam PF00679 Elongation factor G C-terminus 611 696 1.2E-28 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SUPERFAMILY SSF54980 611 700 5.04E-27 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SUPERFAMILY SSF54211 486 610 6.32E-40 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Gene3D G3DSA:3.30.70.240 610 696 4.3E-32 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Gene3D G3DSA:3.30.70.870 413 487 7.9E-39 T 06-07-2017 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Gene3D G3DSA:3.40.50.300 7 293 2.2E-104 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 SMART SM00838 611 698 9.3E-50 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.8E-34 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 6.3E-68 T 06-07-2017 LFZ55_RS01995 005a6b98df33f847f341d41d8c65b483 704 Pfam PF03764 Elongation factor G, domain IV 486 609 5.1E-45 T 06-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LFZ55_RS07050 103d176576b078607703def9c51d767c 430 Pfam PF00155 Aminotransferase class I and II 108 423 1.7E-24 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS07050 103d176576b078607703def9c51d767c 430 Gene3D G3DSA:1.10.10.10 9 73 2.6E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07050 103d176576b078607703def9c51d767c 430 Gene3D G3DSA:3.40.640.10 117 327 1.8E-40 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS07050 103d176576b078607703def9c51d767c 430 SUPERFAMILY SSF46785 7 73 1.49E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07050 103d176576b078607703def9c51d767c 430 SUPERFAMILY SSF53383 84 429 4.72E-61 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS07050 103d176576b078607703def9c51d767c 430 SMART SM00345 10 69 2.9E-19 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS07050 103d176576b078607703def9c51d767c 430 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 2.2E-17 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS03120 0fc168668418956bfa451f6481dc3c9f 332 Gene3D G3DSA:3.40.50.720 1 142 9.0E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03120 0fc168668418956bfa451f6481dc3c9f 332 Gene3D G3DSA:3.30.360.10 143 324 2.2E-65 T 06-07-2017 LFZ55_RS03120 0fc168668418956bfa451f6481dc3c9f 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.8E-26 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS03120 0fc168668418956bfa451f6481dc3c9f 332 SUPERFAMILY SSF51735 2 152 2.91E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03120 0fc168668418956bfa451f6481dc3c9f 332 SUPERFAMILY SSF55347 127 292 8.34E-22 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:1.10.460.10 164 211 4.2E-59 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:1.10.460.10 474 596 4.2E-59 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SUPERFAMILY SSF57783 809 864 1.09E-22 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:2.70.20.10 338 473 7.1E-36 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:2.70.20.10 213 333 4.4E-31 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SMART SM00437 272 527 2.7E-127 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 4.2E-21 T 06-07-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 1.9E-12 T 06-07-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SMART SM00436 133 221 3.6E-49 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SUPERFAMILY SSF57783 744 807 2.04E-19 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SUPERFAMILY SSF56712 3 609 1.05E-206 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF01751 Toprim domain 5 142 5.6E-34 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:3.30.65.10 745 806 4.1E-26 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:3.30.65.10 597 635 2.2E-11 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:3.30.65.10 708 743 1.1E-11 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.922 T 06-07-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:3.40.50.140 1 163 1.6E-59 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 2.8E-11 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 8.0E-6 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 8.3E-267 T 06-07-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SMART SM00493 3 132 1.2E-35 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Pfam PF01131 DNA topoisomerase 157 565 1.1E-127 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 SUPERFAMILY SSF57783 704 743 2.89E-7 T 06-07-2017 LFZ55_RS11205 e1c84152d358337e5bf294454660e05b 865 Gene3D G3DSA:2.20.25.10 808 865 3.7E-32 T 06-07-2017 LFZ55_RS19625 c1ac823386c07a28cb3e48b32460c687 187 Gene3D G3DSA:3.40.80.10 3 179 2.3E-70 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS19625 c1ac823386c07a28cb3e48b32460c687 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 54 167 5.1E-19 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS19625 c1ac823386c07a28cb3e48b32460c687 187 SUPERFAMILY SSF55846 2 178 4.45E-68 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS19625 c1ac823386c07a28cb3e48b32460c687 187 SMART SM00644 16 166 1.5E-60 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS22980 1f6493ecb3623f3768a107618cab3341 577 SUPERFAMILY SSF53649 236 556 2.43E-29 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS22980 1f6493ecb3623f3768a107618cab3341 577 Gene3D G3DSA:3.40.720.10 240 535 9.5E-13 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS22980 1f6493ecb3623f3768a107618cab3341 577 Pfam PF08019 Domain of unknown function (DUF1705) 56 207 1.5E-4 T 06-07-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 LFZ55_RS22980 1f6493ecb3623f3768a107618cab3341 577 Pfam PF00884 Sulfatase 238 529 5.2E-42 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 Gene3D G3DSA:2.40.128.130 1025 1264 8.2E-24 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 Gene3D G3DSA:2.160.20.20 355 534 7.9E-45 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 Gene3D G3DSA:2.160.20.20 641 775 7.9E-45 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 Gene3D G3DSA:2.160.20.20 776 876 1.1E-9 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 Pfam PF02395 Immunoglobulin A1 protease 51 809 2.3E-132 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 SUPERFAMILY SSF51126 609 940 1.1E-55 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 SUPERFAMILY SSF51126 395 522 1.1E-55 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 SUPERFAMILY SSF103515 1025 1264 1.96E-9 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 836 1264 1.4E-11 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 SUPERFAMILY SSF50494 219 305 2.3E-6 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 SUPERFAMILY SSF50494 111 187 2.3E-6 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 257 275 1.6E-17 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 61 81 1.6E-17 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS21940 fd818d4e67699eb35f0fc3a263df5a4f 1264 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 643 665 1.6E-17 T 06-07-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 Pfam PF03466 LysR substrate binding domain 100 305 2.9E-33 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 Gene3D G3DSA:3.40.190.10 102 184 3.2E-18 T 06-07-2017 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 SUPERFAMILY SSF53850 101 305 1.33E-32 T 06-07-2017 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.7E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 SUPERFAMILY SSF46785 10 121 3.11E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 Gene3D G3DSA:1.10.10.10 10 91 1.3E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11845 32e0df6519203e7e5c51f38257c2d85c 307 Gene3D G3DSA:3.40.190.10 185 271 7.9E-9 T 06-07-2017 LFZ55_RS09010 d088ef092bf65e06316ab3e2b97cfe8c 210 Pfam PF06130 Phosphate propanoyltransferase 23 101 1.1E-24 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 LFZ55_RS09010 d088ef092bf65e06316ab3e2b97cfe8c 210 Pfam PF06130 Phosphate propanoyltransferase 131 196 2.2E-18 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 LFZ55_RS09010 d088ef092bf65e06316ab3e2b97cfe8c 210 PIRSF PIRSF010130 1 210 7.5E-85 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF143517 992 1144 4.45E-45 T 06-07-2017 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF52540 520 780 5.53E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF52540 779 987 3.9E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.895 T 06-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF52540 351 463 8.72E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Gene3D G3DSA:3.30.2060.10 130 207 2.1E-14 T 06-07-2017 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 06-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SMART SM00982 1005 1105 2.3E-50 T 06-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF141259 467 545 2.09E-23 T 06-07-2017 IPR003711 CarD-like/TRCF domain LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Gene3D G3DSA:3.40.50.300 585 783 2.2E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SMART SM00490 823 907 1.6E-19 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 2.0E-20 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 3.0E-24 T 06-07-2017 IPR003711 CarD-like/TRCF domain LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SMART SM00487 597 787 4.1E-35 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Pfam PF03461 TRCF domain 1006 1098 2.5E-29 T 06-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SMART SM01058 476 573 6.0E-50 T 06-07-2017 IPR003711 CarD-like/TRCF domain LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 SUPERFAMILY SSF52540 6 341 5.8E-101 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Gene3D G3DSA:3.40.50.300 795 960 3.0E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14185 636b0b42f1f73b438df50bb66f2fc395 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.5E-18 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 SUPERFAMILY SSF51730 262 617 3.33E-123 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 2.7E-46 T 06-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 3.0E-259 T 06-07-2017 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Gene3D G3DSA:3.40.309.10 898 1090 7.5E-43 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Pfam PF01619 Proline dehydrogenase 270 569 3.7E-99 T 06-07-2017 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1105 2.9E-110 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Gene3D G3DSA:3.40.605.10 655 897 4.3E-65 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 SUPERFAMILY SSF81935 88 261 1.44E-66 T 06-07-2017 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 SUPERFAMILY SSF53720 656 1111 1.7E-120 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Gene3D G3DSA:1.10.2060.10 142 260 5.2E-55 T 06-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Gene3D G3DSA:3.20.20.220 261 616 3.1E-121 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 PIRSF PIRSF000197 74 1320 0.0 T 06-07-2017 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 Gene3D G3DSA:1.20.5.550 87 138 7.5E-26 T 06-07-2017 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 LFZ55_RS14890 7c708402b503df1a2c348f8e4f014f4d 1320 SUPERFAMILY SSF47598 3 45 2.11E-10 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.0E-32 T 06-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Gene3D G3DSA:1.10.8.60 187 258 8.3E-33 T 06-07-2017 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Gene3D G3DSA:3.40.50.300 23 178 4.6E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 SUPERFAMILY SSF46785 260 333 6.46E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 06-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 2.4E-146 T 06-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.5E-115 T 06-07-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Gene3D G3DSA:1.10.10.10 260 330 3.3E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 SUPERFAMILY SSF52540 23 255 3.05E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.408 T 06-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LFZ55_RS09955 016d1e7b6e9cb269a354fd92199656be 336 SMART SM00382 54 181 1.3E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 Gene3D G3DSA:1.20.1050.10 90 197 6.5E-13 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 SUPERFAMILY SSF47616 73 198 1.38E-16 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 7.0E-12 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 Gene3D G3DSA:3.40.30.10 1 89 5.6E-19 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 1.5E-14 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS00800 963f29d79c69ace92073d3989b2d1846 202 SUPERFAMILY SSF52833 1 100 4.22E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17805 f13789c483e83a71344d508aed3d7923 172 Pfam PF00419 Fimbrial protein 31 171 5.9E-17 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS17805 f13789c483e83a71344d508aed3d7923 172 SUPERFAMILY SSF49401 29 172 3.78E-29 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS17805 f13789c483e83a71344d508aed3d7923 172 Gene3D G3DSA:2.60.40.1090 29 172 2.3E-35 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS05815 babb26f7ba09ea0358c18b5dc967f56f 356 PIRSF PIRSF001361 1 354 2.2E-163 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS05815 babb26f7ba09ea0358c18b5dc967f56f 356 Gene3D G3DSA:3.20.20.70 10 348 9.9E-153 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS05815 babb26f7ba09ea0358c18b5dc967f56f 356 Pfam PF00793 DAHP synthetase I family 39 340 1.6E-108 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS05815 babb26f7ba09ea0358c18b5dc967f56f 356 SUPERFAMILY SSF51569 8 345 1.74E-134 T 06-07-2017 LFZ55_RS05815 babb26f7ba09ea0358c18b5dc967f56f 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 1.2E-174 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 SUPERFAMILY SSF52518 10 199 1.07E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 SUPERFAMILY SSF52518 243 381 1.07E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 SUPERFAMILY SSF52922 491 619 1.7E-30 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 6.2E-26 T 06-07-2017 IPR033248 Transketolase, C-terminal domain LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 SMART SM00861 319 484 1.1E-66 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Pfam PF02779 Transketolase, pyrimidine binding domain 321 481 1.6E-39 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 06-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 SUPERFAMILY SSF52518 318 503 2.23E-57 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.504 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 2.2E-117 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Gene3D G3DSA:3.40.50.920 496 619 3.5E-34 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Gene3D G3DSA:3.40.50.970 335 495 7.5E-35 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Gene3D G3DSA:3.40.50.970 26 201 7.7E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS18335 5a08db09fde698d35ce03a38cb538e06 620 Gene3D G3DSA:3.40.50.970 242 334 7.7E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS10050 dfbc6bc09037e8094b0af10ee2843ca9 231 SMART SM00479 1 156 2.8E-36 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS10050 dfbc6bc09037e8094b0af10ee2843ca9 231 SUPERFAMILY SSF53098 4 191 1.41E-33 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10050 dfbc6bc09037e8094b0af10ee2843ca9 231 Gene3D G3DSA:3.30.420.10 4 153 1.1E-36 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10050 dfbc6bc09037e8094b0af10ee2843ca9 231 Pfam PF00929 Exonuclease 4 147 3.3E-14 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 3.8E-63 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 SMART SM00062 27 256 6.7E-71 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 Gene3D G3DSA:3.40.190.10 116 212 2.3E-31 T 06-07-2017 LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 SUPERFAMILY SSF53850 1 257 4.24E-66 T 06-07-2017 LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 4.2E-101 T 06-07-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 Gene3D G3DSA:3.40.190.10 215 257 4.9E-43 T 06-07-2017 LFZ55_RS07490 69cf1c5ce3351383465b6d522718d265 260 Gene3D G3DSA:3.40.190.10 26 113 4.9E-43 T 06-07-2017 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Pfam PF00589 Phage integrase family 113 284 2.6E-56 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 58.841 T 06-07-2017 IPR023009 Tyrosine recombinase XerC/XerD LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 66.312 T 06-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 SUPERFAMILY SSF56349 106 296 5.0E-60 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 SUPERFAMILY SSF47823 4 100 1.41E-35 T 06-07-2017 IPR010998 Integrase, Lambda-type, N-terminal LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Gene3D G3DSA:1.10.150.130 7 100 1.3E-28 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 6.5E-25 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 Gene3D G3DSA:1.10.443.10 113 289 7.8E-60 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS04145 4e444980d22aa32caa01dcf83327e878 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 3.7E-120 T 06-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 9 295 3.6E-101 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 SUPERFAMILY SSF69318 344 506 5.36E-16 T 06-07-2017 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 SUPERFAMILY SSF69318 554 657 5.36E-16 T 06-07-2017 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 835 978 6.0E-49 T 06-07-2017 IPR022044 Insecticide toxin TcdB middle/C-terminal LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 624 762 1.3E-29 T 06-07-2017 IPR022045 Insecticide toxin TcdB middle/N-terminal LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 6 27 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 276 294 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 243 262 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 65 81 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 105 123 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 168 186 1.1E-53 T 06-07-2017 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 Gene3D G3DSA:2.130.10.130 422 516 2.3E-5 T 06-07-2017 LFZ55_RS08030 36e33feef5a50470867c2a8fcefc4fc3 1444 Gene3D G3DSA:2.130.10.130 559 682 2.3E-5 T 06-07-2017 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Gene3D G3DSA:3.30.1490.20 157 223 1.2E-26 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Gene3D G3DSA:3.30.470.20 224 361 4.9E-53 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 SUPERFAMILY SSF56059 140 354 4.42E-61 T 06-07-2017 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 SUPERFAMILY SSF52440 3 139 1.82E-35 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.8E-30 T 06-07-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 PIRSF PIRSF039102 1 359 3.2E-138 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.779 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.1E-117 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 2.2E-82 T 06-07-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS18535 54521803e71e0d81c3c9521595599811 364 Gene3D G3DSA:3.40.50.20 1 129 2.5E-35 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 Gene3D G3DSA:3.40.190.10 94 177 7.4E-9 T 06-07-2017 LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 SUPERFAMILY SSF53850 93 290 5.85E-25 T 06-07-2017 LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 Pfam PF03466 LysR substrate binding domain 97 289 3.4E-20 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 Gene3D G3DSA:3.40.190.10 178 264 3.8E-10 T 06-07-2017 LFZ55_RS03040 c513bcfcdd9225041ad10435fa626083 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19005 dff569436ed0f1633e86a8fd64e703c7 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 33.019 T 06-07-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 LFZ55_RS19005 dff569436ed0f1633e86a8fd64e703c7 133 Pfam PF07417 Transcriptional regulator Crl 5 122 5.7E-55 T 06-07-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 2.6E-60 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 SUPERFAMILY SSF53098 3 136 9.56E-43 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 Gene3D G3DSA:3.30.420.140 3 136 2.6E-47 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 SMART SM00732 3 103 1.2E-40 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 Pfam PF03652 Holliday junction resolvase 4 135 8.8E-43 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LFZ55_RS03840 0a330120384ecec9fa6657e3bee33b84 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.887 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LFZ55_RS14390 08fbabb6a9a1d8574649f3c056a22bea 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS14390 08fbabb6a9a1d8574649f3c056a22bea 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.3E-10 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14390 08fbabb6a9a1d8574649f3c056a22bea 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 7.2E-52 T 06-07-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 LFZ55_RS14390 08fbabb6a9a1d8574649f3c056a22bea 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 2.1E-12 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LFZ55_RS01085 a19100d9f371e1c00791c8e995f41cf9 523 Pfam PF10995 GGDEF I-site like or GIL domain 165 474 5.6E-124 T 06-07-2017 IPR017745 Cellulose biosynthesis protein BcsE LFZ55_RS01085 a19100d9f371e1c00791c8e995f41cf9 523 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 475 1.3E-131 T 06-07-2017 IPR017745 Cellulose biosynthesis protein BcsE LFZ55_RS11530 8023700f5d7e3fb8bb38cd5799cdc3bd 69 Gene3D G3DSA:3.40.50.720 1 65 1.4E-16 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11530 8023700f5d7e3fb8bb38cd5799cdc3bd 69 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 65 2.7E-13 T 06-07-2017 LFZ55_RS11530 8023700f5d7e3fb8bb38cd5799cdc3bd 69 SUPERFAMILY SSF51735 1 66 2.62E-17 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 Gene3D G3DSA:3.30.70.20 191 278 1.2E-15 T 06-07-2017 LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 Pfam PF12801 4Fe-4S binding domain 179 211 2.2E-5 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 Pfam PF12801 4Fe-4S binding domain 83 126 7.5E-13 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 1.3E-114 T 06-07-2017 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 SUPERFAMILY SSF54862 191 276 6.98E-19 T 06-07-2017 LFZ55_RS07940 dd9168fcbca64e51384929ffe7efc701 283 SUPERFAMILY SSF54862 104 143 6.98E-19 T 06-07-2017 LFZ55_RS21665 f6b83b4b2f8b1bb167a8a25e526fa4ed 121 SUPERFAMILY SSF56059 1 118 3.14E-32 T 06-07-2017 LFZ55_RS21665 f6b83b4b2f8b1bb167a8a25e526fa4ed 121 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 1 119 3.1E-42 T 06-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain LFZ55_RS12670 4a32951f55b7234e07b31eacd014a930 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 8.6E-42 T 06-07-2017 IPR009700 Protein of unknown function DUF1283 LFZ55_RS12670 4a32951f55b7234e07b31eacd014a930 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 27.826 T 06-07-2017 IPR009700 Protein of unknown function DUF1283 LFZ55_RS12670 4a32951f55b7234e07b31eacd014a930 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 5.0E-61 T 06-07-2017 IPR009700 Protein of unknown function DUF1283 LFZ55_RS14395 0106a76c5432cb13978d1db8ff41913b 138 Pfam PF00460 Flagella basal body rod protein 9 39 3.9E-12 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14395 0106a76c5432cb13978d1db8ff41913b 138 PIRSF PIRSF002889 1 137 2.7E-41 T 06-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LFZ55_RS14395 0106a76c5432cb13978d1db8ff41913b 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 5.4E-45 T 06-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LFZ55_RS14395 0106a76c5432cb13978d1db8ff41913b 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS24190 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 06-07-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS24190 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS24190 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS24190 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS24190 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 314 330 - T 06-07-2017 IPR013793 Porin, Gram-negative type, conserved site LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 Pfam PF00267 Gram-negative porin 27 362 2.2E-149 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 270 289 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.0E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.6E-19 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 4.6E-19 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 314 331 4.6E-19 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.6E-19 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.6E-19 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 SUPERFAMILY SSF56935 22 362 1.7E-84 T 06-07-2017 LFZ55_RS12135 3ad7ad4c85640e342e8b594ee3d8a8c7 362 Gene3D G3DSA:2.40.160.10 22 362 5.1E-107 T 06-07-2017 IPR023614 Porin domain LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 PIRSF PIRSF000857 5 244 1.6E-53 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 SUPERFAMILY SSF52402 21 208 1.17E-51 T 06-07-2017 LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.703 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 Gene3D G3DSA:3.40.50.620 10 216 1.7E-63 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 5.5E-94 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.1E-50 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 LFZ55_RS04715 d2d36a645c8980a3b2de39cbda897860 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 3.5E-101 T 06-07-2017 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 LFZ55_RS23040 397dade3df80b6517c86f1522de6d553 226 Gene3D G3DSA:2.40.230.30 21 226 1.3E-59 T 06-07-2017 LFZ55_RS23040 397dade3df80b6517c86f1522de6d553 226 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 226 1.5E-62 T 06-07-2017 IPR009331 Oligogalacturonate-specific porin LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Gene3D G3DSA:2.70.150.10 186 334 6.3E-25 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF81665 185 237 2.48E-20 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF81665 334 428 2.48E-20 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF81665 675 715 2.48E-20 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Gene3D G3DSA:3.30.70.100 49 112 3.1E-20 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Pfam PF00122 E1-E2 ATPase 204 425 4.6E-60 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF55008 49 112 1.44E-16 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF81653 236 333 1.05E-20 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 2.6E-177 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 432 639 7.5E-34 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 2.2E-79 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 2.2E-160 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Gene3D G3DSA:3.40.1110.10 448 555 7.9E-21 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Gene3D G3DSA:3.40.50.1000 407 447 1.6E-40 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Gene3D G3DSA:3.40.50.1000 556 694 1.6E-40 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 6.2E-28 T 06-07-2017 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 Pfam PF00403 Heavy-metal-associated domain 53 110 1.9E-13 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF56784 491 726 3.89E-50 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01380 e2dc26b5f8732940f80915d343d592a4 732 SUPERFAMILY SSF56784 433 452 3.89E-50 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Gene3D G3DSA:1.10.8.60 316 413 2.5E-38 T 06-07-2017 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.7E-17 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.684 T 06-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 SMART SM00994 12 51 1.0E-24 T 06-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 2.5E-216 T 06-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 SUPERFAMILY SSF52540 64 403 3.18E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.0E-48 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 06-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 SMART SM01086 317 412 1.0E-35 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 SMART SM00382 111 333 1.2E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 06-07-2017 LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Gene3D G3DSA:3.40.50.300 66 253 2.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18215 38155e61984b056c2ac8ec471750c4d9 423 Gene3D G3DSA:3.40.50.300 294 311 2.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15445 1777b629190bed2e711fa6fe229034ba 160 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 47 3.0E-6 T 06-07-2017 LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 2.1E-69 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 Pfam PF02545 Maf-like protein 4 184 5.4E-59 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 PIRSF PIRSF006305 1 191 5.4E-55 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 SUPERFAMILY SSF52972 2 184 3.01E-63 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.398 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS02400 c13fd84ed8b1c5028a1627eb1450cd89 197 Gene3D G3DSA:3.90.950.10 2 185 6.7E-71 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 46 270 7.4E-121 T 06-07-2017 IPR030984 Microcompartment protein PduB GO:0005198 LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 SMART SM00877 185 262 2.5E-14 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 SMART SM00877 79 161 4.5E-11 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 Pfam PF00936 BMC domain 186 256 1.5E-13 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 Pfam PF00936 BMC domain 80 154 4.3E-12 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 SUPERFAMILY SSF143414 185 260 2.22E-11 T 06-07-2017 LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 PIRSF PIRSF012290 38 270 7.5E-109 T 06-07-2017 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 LFZ55_RS09050 e87f13bb5c5e6de35849dfbd45af44e0 270 SUPERFAMILY SSF143414 79 158 5.1E-9 T 06-07-2017 LFZ55_RS10215 38560676920973abf0a43eb6100f18b3 827 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 299 309 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS10215 38560676920973abf0a43eb6100f18b3 827 SUPERFAMILY SSF141729 22 143 3.01E-23 T 06-07-2017 LFZ55_RS10215 38560676920973abf0a43eb6100f18b3 827 Pfam PF00577 Outer membrane usher protein 184 737 2.8E-159 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS10215 38560676920973abf0a43eb6100f18b3 827 Pfam PF13954 PapC N-terminal domain 23 167 3.8E-35 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS10215 38560676920973abf0a43eb6100f18b3 827 Pfam PF13953 PapC C-terminal domain 751 811 1.3E-13 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS08135 06fd50aa564ca43cd42c51ea25745311 341 Gene3D G3DSA:1.10.3720.10 133 337 5.0E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08135 06fd50aa564ca43cd42c51ea25745311 341 SUPERFAMILY SSF161098 135 321 4.84E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08135 06fd50aa564ca43cd42c51ea25745311 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.9E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08135 06fd50aa564ca43cd42c51ea25745311 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 1.5E-5 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.3E-5 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.3E-5 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 SUPERFAMILY SSF46785 7 101 1.82E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 Gene3D G3DSA:1.10.10.10 4 76 1.4E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 SMART SM00895 85 209 2.1E-15 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 SMART SM00345 17 75 1.1E-22 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 Gene3D G3DSA:1.20.120.530 87 214 9.2E-24 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 Pfam PF07729 FCD domain 89 208 3.3E-23 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.8E-17 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12635 a04838229312a6a711006266a842a21b 228 SUPERFAMILY SSF48008 83 212 4.18E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS01935 9dfe219b63f2bfe9034a1b9381c9654c 183 Gene3D G3DSA:3.40.50.360 6 176 7.4E-46 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS01935 9dfe219b63f2bfe9034a1b9381c9654c 183 Pfam PF02525 Flavodoxin-like fold 6 173 2.4E-39 T 06-07-2017 IPR003680 Flavodoxin-like fold LFZ55_RS01935 9dfe219b63f2bfe9034a1b9381c9654c 183 SUPERFAMILY SSF52218 5 177 1.04E-46 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS01935 9dfe219b63f2bfe9034a1b9381c9654c 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 47.763 T 06-07-2017 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 SUPERFAMILY SSF53335 86 399 4.66E-71 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 Gene3D G3DSA:3.30.750.80 80 187 1.1E-33 T 06-07-2017 LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 Gene3D G3DSA:3.40.50.150 192 402 1.4E-59 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 190 378 2.8E-28 T 06-07-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 SUPERFAMILY SSF88697 10 78 3.13E-17 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 Gene3D G3DSA:2.30.130.10 9 78 1.9E-27 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 SMART SM00359 10 95 1.5E-15 T 06-07-2017 IPR002478 PUA domain GO:0003723 LFZ55_RS15500 279ac17e1873d2282ced82153152c0a8 403 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 8 403 69.273 T 06-07-2017 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS15185 b92bdea78bbe6274e36b604a89caa418 399 Pfam PF13356 Domain of unknown function (DUF4102) 4 92 1.1E-11 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS15185 b92bdea78bbe6274e36b604a89caa418 399 Gene3D G3DSA:1.10.150.130 101 194 1.7E-8 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS15185 b92bdea78bbe6274e36b604a89caa418 399 Pfam PF00589 Phage integrase family 235 376 1.6E-15 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS15185 b92bdea78bbe6274e36b604a89caa418 399 Gene3D G3DSA:1.10.443.10 228 384 6.4E-19 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS15185 b92bdea78bbe6274e36b604a89caa418 399 SUPERFAMILY SSF56349 99 389 7.95E-47 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS24970 d120d3b4614cf56fef19a7028f8e1996 126 SUPERFAMILY SSF47729 2 56 1.29E-23 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS24970 d120d3b4614cf56fef19a7028f8e1996 126 SUPERFAMILY SSF140581 60 126 4.84E-28 T 06-07-2017 LFZ55_RS24970 d120d3b4614cf56fef19a7028f8e1996 126 Gene3D G3DSA:1.10.10.450 2 56 5.9E-30 T 06-07-2017 LFZ55_RS24970 d120d3b4614cf56fef19a7028f8e1996 126 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 3.0E-67 T 06-07-2017 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 LFZ55_RS24970 d120d3b4614cf56fef19a7028f8e1996 126 Pfam PF05261 TraM protein, DNA-binding 2 126 5.4E-60 T 06-07-2017 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 Pfam PF00924 Mechanosensitive ion channel 875 1074 1.9E-53 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 Pfam PF12795 Mechanosensitive ion channel porin domain 31 253 4.6E-56 T 06-07-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 SUPERFAMILY SSF82861 834 916 1.15E-8 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 2.3E-116 T 06-07-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 Gene3D G3DSA:2.30.30.60 933 982 1.3E-16 T 06-07-2017 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 Gene3D G3DSA:3.30.70.100 989 1072 2.8E-8 T 06-07-2017 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 SUPERFAMILY SSF82689 985 1083 2.75E-16 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS21795 ec4c81d3c3de6bc7703926bc1e80ec6b 1108 SUPERFAMILY SSF50182 918 983 7.52E-17 T 06-07-2017 IPR010920 LSM domain LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Pfam PF13005 zinc-finger binding domain of transposase IS66 123 167 7.1E-15 T 06-07-2017 IPR024474 Zinc-finger binding domain of transposase IS66 LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Gene3D G3DSA:1.20.58.60 3 88 1.3E-6 T 06-07-2017 LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Pfam PF03050 Transposase IS66 family 182 467 4.1E-96 T 06-07-2017 IPR004291 Transposase, IS66 LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Pfam PF13817 IS66 C-terminal element 474 511 7.3E-15 T 06-07-2017 LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Pfam PF13007 Transposase C of IS166 homeodomain 40 116 1.7E-10 T 06-07-2017 IPR024463 Transposase TnpC, homeodomain LFZ55_RS15355 437ee044d9b6f223ca1d0503fa323006 518 Gene3D G3DSA:1.10.287.510 123 155 3.2E-4 T 06-07-2017 LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 445 52.5 T 06-07-2017 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 SMART SM00490 259 340 7.6E-32 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 SMART SM00487 20 223 3.4E-64 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 Gene3D G3DSA:3.40.50.300 214 371 4.3E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 Pfam PF00270 DEAD/DEAH box helicase 25 196 7.7E-51 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 Gene3D G3DSA:3.40.50.300 1 213 4.2E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 SUPERFAMILY SSF52540 75 361 6.75E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16520 5d82c12f446c1d15f2be664c9c3186b8 452 Pfam PF00271 Helicase conserved C-terminal domain 236 339 6.6E-26 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 SUPERFAMILY SSF51905 3 335 4.8E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.4E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PIRSF PIRSF000350 2 463 3.5E-70 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Gene3D G3DSA:3.50.50.60 5 144 3.2E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 70.0 T 06-07-2017 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.7E-30 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Gene3D G3DSA:3.50.50.60 145 334 4.4E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.2E-26 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 8.2E-26 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 8.2E-26 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 8.2E-26 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 8.2E-26 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 8.6E-50 T 06-07-2017 LFZ55_RS22940 56fde0be7fcdd5e41f2568a33bc8132d 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS00240 a65ef8b256e9e37460111bea1642f8d6 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 28 9.2E-18 T 06-07-2017 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 LFZ55_RS00240 a65ef8b256e9e37460111bea1642f8d6 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 9.1E-19 T 06-07-2017 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 06-07-2017 IPR033135 ClpP, histidine active site LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 4.0E-112 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-54 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-54 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-54 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-54 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-54 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.043 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 06-07-2017 IPR018215 ClpP, Ser active site LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 Gene3D G3DSA:3.90.226.10 16 205 5.0E-91 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 Pfam PF00574 Clp protease 25 205 2.1E-89 T 06-07-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LFZ55_RS18225 af63471806dbc28e241672ce3caad710 207 SUPERFAMILY SSF52096 23 206 7.73E-76 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS01945 69257c60241f95f6fda97497aea224a4 66 Gene3D G3DSA:3.30.50.10 9 47 3.6E-4 T 06-07-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 LFZ55_RS01945 69257c60241f95f6fda97497aea224a4 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 2.3E-32 T 06-07-2017 IPR012658 Conserved hypothetical protein CHP02443 LFZ55_RS01945 69257c60241f95f6fda97497aea224a4 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 58 1.0E-18 T 06-07-2017 IPR012658 Conserved hypothetical protein CHP02443 LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 1.8E-20 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 SMART SM00382 48 254 4.1E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 Gene3D G3DSA:3.40.50.300 11 276 9.7E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 Pfam PF00005 ABC transporter 40 196 4.3E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 SUPERFAMILY SSF52540 49 317 7.45E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11050 7f6098a7ec800d8bcd944083d2c6fb3f 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 1.3E-24 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Pfam PF13558 Putative exonuclease SbcCD, C subunit 929 999 9.4E-15 T 06-07-2017 LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1037 5.1E-294 T 06-07-2017 IPR004592 Nuclease SbcC, gammaproteobacteria type LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Gene3D G3DSA:3.40.50.300 342 420 2.3E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Gene3D G3DSA:3.40.50.300 253 254 2.3E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Gene3D G3DSA:3.40.50.300 823 839 1.6E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Gene3D G3DSA:3.40.50.300 908 1032 1.6E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Gene3D G3DSA:3.40.50.300 1 175 1.6E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 SUPERFAMILY SSF52540 826 1017 1.83E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 Pfam PF13476 AAA domain 5 226 8.1E-27 T 06-07-2017 LFZ55_RS18460 0a173a5413600758836df3f8ba7fc5bf 1045 SUPERFAMILY SSF52540 1 317 1.78E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.5E-29 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.5E-29 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.5E-29 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.5E-29 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 Gene3D G3DSA:3.40.50.300 1 288 9.2E-129 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 SUPERFAMILY SSF52540 4 286 9.52E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01865 0982162371d7bd4c41ca8362bd9c5e4c 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.3E-76 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LFZ55_RS10175 d4e4e36fb490d89f0a2fb7de389dc865 180 SUPERFAMILY SSF53955 2 175 4.5E-44 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS10175 d4e4e36fb490d89f0a2fb7de389dc865 180 Pfam PF05838 Glycosyl hydrolase 108 8 90 3.7E-25 T 06-07-2017 IPR008565 Protein of unknown function DUF847 LFZ55_RS10175 d4e4e36fb490d89f0a2fb7de389dc865 180 Pfam PF09374 Predicted Peptidoglycan domain 94 178 2.7E-21 T 06-07-2017 IPR018537 Peptidoglycan binding domain LFZ55_RS10175 d4e4e36fb490d89f0a2fb7de389dc865 180 Gene3D G3DSA:1.20.141.10 3 179 3.1E-44 T 06-07-2017 LFZ55_RS19200 9206f8621155da60c693103d069aff70 72 Pfam PF06786 Uncharacterised protein family (UPF0253) 8 71 2.2E-34 T 06-07-2017 IPR009624 Uncharacterised protein family UPF0253 LFZ55_RS19200 9206f8621155da60c693103d069aff70 72 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 72 4.0E-30 T 06-07-2017 IPR009624 Uncharacterised protein family UPF0253 LFZ55_RS19200 9206f8621155da60c693103d069aff70 72 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 7 72 26.748 T 06-07-2017 IPR009624 Uncharacterised protein family UPF0253 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SUPERFAMILY SSF55021 816 870 4.58E-9 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SUPERFAMILY SSF81593 213 328 7.85E-10 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SUPERFAMILY SSF109604 457 625 1.13E-13 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 54 884 3.4E-298 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 PIRSF PIRSF006288 25 889 0.0 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Pfam PF01909 Nucleotidyltransferase domain 86 126 9.5E-7 T 06-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SUPERFAMILY SSF81301 31 189 1.01E-20 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.2E-36 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SMART SM00471 464 611 2.2E-11 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Gene3D G3DSA:1.10.3210.10 438 630 3.4E-28 T 06-07-2017 IPR006674 HD domain LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 346.785 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Pfam PF01966 HD domain 468 601 4.8E-15 T 06-07-2017 IPR006674 HD domain LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 SUPERFAMILY SSF55021 705 772 3.12E-9 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Gene3D G3DSA:3.30.460.10 88 179 3.3E-7 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Pfam PF01842 ACT domain 820 872 2.2E-8 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Pfam PF01842 ACT domain 709 766 1.4E-7 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Gene3D G3DSA:3.30.70.260 708 769 3.0E-4 T 06-07-2017 LFZ55_RS19330 f6327b6653b67e155ac93f55dbc840d1 890 Gene3D G3DSA:3.30.70.260 817 867 1.6E-7 T 06-07-2017 LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 SUPERFAMILY SSF48008 77 219 9.94E-18 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 Gene3D G3DSA:1.10.10.10 13 71 3.9E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 SMART SM00345 12 70 1.7E-17 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 SUPERFAMILY SSF46785 13 74 3.33E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 Gene3D G3DSA:1.20.120.530 73 221 1.7E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 2.0E-12 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 Pfam PF07729 FCD domain 80 210 7.8E-21 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS05455 82889736410bb6c62f516d5b6f9f8cb5 230 SMART SM00895 80 212 1.6E-17 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 SUPERFAMILY SSF141734 6 122 3.79E-46 T 06-07-2017 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.834 T 06-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 1.1E-29 T 06-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 3.0E-17 T 06-07-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.411 T 06-07-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 1.3E-30 T 06-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 SUPERFAMILY SSF101386 115 202 7.41E-23 T 06-07-2017 LFZ55_RS08855 683d422d7c02532a533ec8153e2b3b6a 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 5.0E-24 T 06-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 SUPERFAMILY SSF53822 68 338 1.41E-91 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 Pfam PF13377 Periplasmic binding protein-like domain 177 337 5.5E-44 T 06-07-2017 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 SUPERFAMILY SSF47413 9 67 1.03E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 Gene3D G3DSA:1.10.260.40 10 62 4.7E-19 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 Gene3D G3DSA:3.40.50.2300 63 173 1.5E-29 T 06-07-2017 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 4.5E-18 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 06-07-2017 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 Gene3D G3DSA:3.40.50.2300 174 338 2.7E-66 T 06-07-2017 LFZ55_RS23055 25a31e2faa370eba2a5f2ff898452c0d 341 SMART SM00354 9 79 8.9E-28 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 1.2E-124 T 06-07-2017 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 SUPERFAMILY SSF51726 4 389 2.62E-113 T 06-07-2017 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.472 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 Gene3D G3DSA:3.20.20.210 387 752 6.8E-135 T 06-07-2017 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 SUPERFAMILY SSF51726 392 752 7.33E-121 T 06-07-2017 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 Gene3D G3DSA:3.20.20.210 4 384 2.2E-149 T 06-07-2017 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 PIRSF PIRSF000382 2 754 0.0 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LFZ55_RS23615 7e7263d5dea1fbb0a233e06816ae0395 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 748 1.6E-160 T 06-07-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 PIRSF PIRSF002131 1 129 5.9E-53 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 06-07-2017 IPR018102 Ribosomal S11, conserved site LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 06-07-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 Gene3D G3DSA:3.30.420.80 9 129 1.4E-54 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02155 c721f01a01c8e70161c47ada92e4bbf1 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 06-07-2017 LFZ55_RS01465 15cfaef426e5f571ba50b3285ff53415 295 Gene3D G3DSA:1.10.3720.10 62 291 1.5E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01465 15cfaef426e5f571ba50b3285ff53415 295 SUPERFAMILY SSF161098 56 282 1.16E-50 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01465 15cfaef426e5f571ba50b3285ff53415 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 8.1E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS04870 8f144da6c8c2db154361b6d1d1dfa7b7 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 190 1.9E-44 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04870 8f144da6c8c2db154361b6d1d1dfa7b7 212 SMART SM01007 13 192 3.0E-58 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04870 8f144da6c8c2db154361b6d1d1dfa7b7 212 SUPERFAMILY SSF53639 7 211 3.53E-61 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04870 8f144da6c8c2db154361b6d1d1dfa7b7 212 Gene3D G3DSA:3.40.225.10 7 211 7.9E-66 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04815 91efb5e9140ff53a560da2fc44e18b97 253 SUPERFAMILY SSF64167 1 246 1.11E-82 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LFZ55_RS04815 91efb5e9140ff53a560da2fc44e18b97 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.002 T 06-07-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LFZ55_RS04815 91efb5e9140ff53a560da2fc44e18b97 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 3.5E-77 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LFZ55_RS04815 91efb5e9140ff53a560da2fc44e18b97 253 Gene3D G3DSA:3.40.1210.10 1 246 4.1E-84 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LFZ55_RS04815 91efb5e9140ff53a560da2fc44e18b97 253 Pfam PF01975 Survival protein SurE 3 180 2.4E-55 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LFZ55_RS03680 fd4275023fa5e3b64d000d2cca31d36a 101 Gene3D G3DSA:1.20.5.780 9 88 1.9E-17 T 06-07-2017 LFZ55_RS03680 fd4275023fa5e3b64d000d2cca31d36a 101 Pfam PF08681 Protein of unknown function (DUF1778) 14 88 2.4E-25 T 06-07-2017 IPR014795 Vibrio phage ICP1, Orf50 LFZ55_RS03680 fd4275023fa5e3b64d000d2cca31d36a 101 SUPERFAMILY SSF47598 9 87 1.33E-20 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Gene3D G3DSA:3.40.50.1220 194 344 4.6E-45 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Gene3D G3DSA:3.40.50.970 354 537 1.6E-53 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 PIRSF PIRSF036565 1 550 6.6E-197 T 06-07-2017 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 SUPERFAMILY SSF52467 167 323 3.57E-26 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 2.0E-31 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 526 3.0E-18 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Gene3D G3DSA:3.40.50.970 4 179 4.0E-75 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 318 1.4E-16 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 SUPERFAMILY SSF52518 355 538 2.5E-44 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07190 4b60e30edd48d50a16832e021cbc672a 550 SUPERFAMILY SSF52518 5 179 2.95E-41 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 56 835 0.0 T 06-07-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Gene3D G3DSA:3.40.50.740 92 193 1.7E-48 T 06-07-2017 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Gene3D G3DSA:3.40.50.740 409 516 1.7E-48 T 06-07-2017 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Pfam PF00384 Molybdopterin oxidoreductase 99 572 7.8E-103 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 8 835 0.0 T 06-07-2017 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Pfam PF01568 Molydopterin dinucleotide binding domain 690 811 2.7E-25 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Gene3D G3DSA:2.40.40.20 663 827 3.4E-60 T 06-07-2017 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Gene3D G3DSA:3.40.228.10 197 408 3.3E-53 T 06-07-2017 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 SUPERFAMILY SSF50692 684 832 2.03E-44 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 Gene3D G3DSA:3.90.55.10 517 621 1.6E-33 T 06-07-2017 LFZ55_RS00105 d19cb56012c2d70c83dab2f7a4cc60b1 850 SUPERFAMILY SSF53706 57 692 1.3E-159 T 06-07-2017 LFZ55_RS21110 2847d1d372eb70bb33d2a4e6da02d3f5 84 Gene3D G3DSA:1.10.260.40 1 73 1.6E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21110 2847d1d372eb70bb33d2a4e6da02d3f5 84 Pfam PF12844 Helix-turn-helix domain 5 69 2.5E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS21110 2847d1d372eb70bb33d2a4e6da02d3f5 84 SUPERFAMILY SSF47413 2 70 2.03E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21110 2847d1d372eb70bb33d2a4e6da02d3f5 84 SMART SM00530 5 64 1.8E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 Pfam PF00425 chorismate binding enzyme 193 444 2.3E-92 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 SUPERFAMILY SSF56322 5 452 2.09E-146 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 108 448 3.5E-133 T 06-07-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 Gene3D G3DSA:3.60.120.10 13 452 4.1E-150 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 1.4E-18 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 1.4E-18 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 1.4E-18 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.4E-18 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS10415 34f10e9dafb5a7ef0af219afdf0938ad 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 153 3.7E-24 T 06-07-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS17310 9c1faa5d56ba4bed819e7b7394ecff34 311 SUPERFAMILY SSF53590 3 308 6.28E-107 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS17310 9c1faa5d56ba4bed819e7b7394ecff34 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 06-07-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 LFZ55_RS17310 9c1faa5d56ba4bed819e7b7394ecff34 311 Gene3D G3DSA:3.90.245.10 3 308 8.7E-117 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS17310 9c1faa5d56ba4bed819e7b7394ecff34 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 300 1.2E-78 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS17310 9c1faa5d56ba4bed819e7b7394ecff34 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 77.976 T 06-07-2017 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Pfam PF10531 SLBB domain 173 222 1.6E-6 T 06-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Gene3D G3DSA:3.10.560.10 245 346 8.9E-32 T 06-07-2017 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Gene3D G3DSA:3.30.1950.10 89 164 1.1E-32 T 06-07-2017 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 5.7E-27 T 06-07-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Gene3D G3DSA:3.10.560.10 165 244 3.5E-28 T 06-07-2017 LFZ55_RS08675 f3ef90156dc97527ccb2b79c79e5487f 379 Gene3D G3DSA:1.20.5.70 347 379 1.8E-19 T 06-07-2017 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Gene3D G3DSA:3.40.120.10 251 358 1.3E-31 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.652 T 06-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Gene3D G3DSA:3.40.120.10 176 250 1.1E-26 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Gene3D G3DSA:3.30.310.50 359 443 6.4E-17 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 SUPERFAMILY SSF53738 2 181 5.1E-49 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Gene3D G3DSA:3.40.120.10 4 151 1.2E-46 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 4.0E-45 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.5E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.5E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.5E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 2.0E-31 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 SUPERFAMILY SSF53738 156 255 2.04E-29 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.8E-20 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 3.0E-15 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 SUPERFAMILY SSF55957 357 444 1.27E-21 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 2.3E-196 T 06-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS02755 36bf88fa81dde036d36443d2062e5715 445 SUPERFAMILY SSF53738 258 365 2.35E-30 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 7.0E-84 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 SUPERFAMILY SSF56519 56 253 1.44E-53 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 7.1E-238 T 06-07-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 1.2E-45 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 Gene3D G3DSA:3.40.710.10 253 612 8.0E-98 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 SUPERFAMILY SSF56601 254 611 2.99E-90 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS17365 3b339626587a7f30eaf3cbb14c7a63af 633 Gene3D G3DSA:3.90.1310.10 130 252 2.5E-40 T 06-07-2017 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 Pfam PF00085 Thioredoxin 37 137 9.1E-28 T 06-07-2017 IPR013766 Thioredoxin domain GO:0045454 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 06-07-2017 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 06-07-2017 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 06-07-2017 LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 SUPERFAMILY SSF52833 24 139 2.09E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 Gene3D G3DSA:3.40.30.10 29 138 1.2E-36 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS05910 1d7326dbb9d17e98bc418097dc9b61ad 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 1.3E-36 T 06-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF03979 Sigma-70 factor, region 1.1 49 126 1.3E-30 T 06-07-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 SUPERFAMILY SSF88659 499 572 9.72E-21 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF04545 Sigma-70, region 4 594 647 9.8E-19 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 SUPERFAMILY SSF88659 556 658 2.88E-25 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF00140 Sigma-70 factor, region 1.2 143 173 1.6E-12 T 06-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF04542 Sigma-70 region 2 426 495 1.9E-21 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF04546 Sigma-70, non-essential region 184 395 1.5E-75 T 06-07-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 SUPERFAMILY SSF88946 160 493 1.09E-104 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 422 647 4.1E-38 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Gene3D G3DSA:1.10.601.10 157 495 1.1E-140 T 06-07-2017 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 450 463 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Gene3D G3DSA:1.10.10.10 499 550 2.0E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 619 645 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 PRINTS PR00046 Major sigma-70 factor signature 474 482 8.8E-31 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 PRINTS PR00046 Major sigma-70 factor signature 634 645 8.8E-31 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 PRINTS PR00046 Major sigma-70 factor signature 598 610 8.8E-31 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 PRINTS PR00046 Major sigma-70 factor signature 450 463 8.8E-31 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 PRINTS PR00046 Major sigma-70 factor signature 619 634 8.8E-31 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 49 659 46.952 T 06-07-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Gene3D G3DSA:1.10.10.10 590 659 1.4E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 Pfam PF04539 Sigma-70 region 3 505 580 3.8E-29 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS03175 307a2db8f1619ceb28ba76c8518d1ee0 660 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 422 658 1.6E-120 T 06-07-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS15785 7c44bc9ebc5d0a4333a8ef7519d136e9 473 PIRSF PIRSF006060 1 472 1.7E-52 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS15785 7c44bc9ebc5d0a4333a8ef7519d136e9 473 Pfam PF13520 Amino acid permease 11 450 3.5E-30 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 Pfam PF02310 B12 binding domain 586 701 5.2E-15 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 SUPERFAMILY SSF51703 4 542 1.81E-218 T 06-07-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 06-07-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 SUPERFAMILY SSF52242 556 713 1.83E-54 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 4.6E-279 T 06-07-2017 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 Gene3D G3DSA:3.40.50.280 553 711 6.5E-67 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 Pfam PF01642 Methylmalonyl-CoA mutase 28 539 3.7E-236 T 06-07-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 3.0E-64 T 06-07-2017 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS04025 2d1baef8141ca9f7a97a1e94ebd36464 714 Gene3D G3DSA:3.20.20.240 28 494 1.6E-207 T 06-07-2017 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 2.4E-180 T 06-07-2017 IPR014180 Sugar isomerase, AgaS GO:0016861 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 Gene3D G3DSA:3.40.50.10490 11 193 3.5E-67 T 06-07-2017 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 Gene3D G3DSA:3.40.50.10490 199 376 4.7E-48 T 06-07-2017 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 SUPERFAMILY SSF53697 15 373 7.17E-51 T 06-07-2017 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 Pfam PF01380 SIS domain 224 355 1.7E-17 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS02905 4d3e0b7a8785d0121fb1668cf6c7e097 384 Pfam PF01380 SIS domain 49 188 9.4E-28 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS16050 17dc1f7525b50997ce0a67d2b6d74efb 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 8.1E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16050 17dc1f7525b50997ce0a67d2b6d74efb 317 SUPERFAMILY SSF161098 27 308 1.12E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16050 17dc1f7525b50997ce0a67d2b6d74efb 317 Gene3D G3DSA:1.10.3720.10 25 306 1.7E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 Pfam PF00294 pfkB family carbohydrate kinase 13 305 6.8E-57 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 SUPERFAMILY SSF53613 13 311 1.03E-58 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 Gene3D G3DSA:3.40.1190.20 13 313 3.2E-68 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 Gene3D G3DSA:3.40.50.620 340 461 8.8E-36 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.602 T 06-07-2017 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 SUPERFAMILY SSF52374 340 471 9.29E-22 T 06-07-2017 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.1E-17 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.6E-15 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 9.8E-129 T 06-07-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 LFZ55_RS03260 c8a1dc95a1f6794a6b2e3766e832c756 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 1.0E-64 T 06-07-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 PIRSF PIRSF000538 1 484 3.2E-136 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 Gene3D G3DSA:3.30.420.40 1 240 7.7E-68 T 06-07-2017 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 8.6E-83 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 SUPERFAMILY SSF53067 242 482 8.64E-63 T 06-07-2017 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 SUPERFAMILY SSF53067 2 242 2.42E-72 T 06-07-2017 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 Gene3D G3DSA:3.30.420.40 243 482 1.3E-53 T 06-07-2017 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 5.2E-189 T 06-07-2017 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 LFZ55_RS00910 969344f941e532eabc75e0daeee3d65a 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 1.1E-30 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS20980 f3c14fe9c5e91de231e231d7e3a4a252 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 3 77 2.8E-20 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 LFZ55_RS20980 f3c14fe9c5e91de231e231d7e3a4a252 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 2.4E-18 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 LFZ55_RS19085 b009414c755cee3c49b3b3ecb83c9365 155 Pfam PF00075 RNase H 3 141 6.7E-54 T 06-07-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LFZ55_RS19085 b009414c755cee3c49b3b3ecb83c9365 155 SUPERFAMILY SSF53098 4 141 1.26E-58 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS19085 b009414c755cee3c49b3b3ecb83c9365 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 39.716 T 06-07-2017 IPR022892 Ribonuclease H GO:0004523 LFZ55_RS19085 b009414c755cee3c49b3b3ecb83c9365 155 Gene3D G3DSA:3.30.420.10 3 149 5.2E-62 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 SUPERFAMILY SSF52540 76 361 5.78E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 Gene3D G3DSA:3.40.50.300 215 374 1.0E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 SMART SM00487 23 223 2.8E-59 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 SMART SM00490 262 343 4.9E-30 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 Gene3D G3DSA:3.40.50.300 3 214 2.7E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 49.669 T 06-07-2017 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 Pfam PF00270 DEAD/DEAH box helicase 28 198 2.8E-47 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS05935 99152107fc068e507f9e751c7a596c17 444 Pfam PF00271 Helicase conserved C-terminal domain 235 343 4.8E-29 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS11865 d81ae9f21db14fd4c016392074d8ffe7 191 SMART SM00867 25 189 1.7E-50 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS11865 d81ae9f21db14fd4c016392074d8ffe7 191 Gene3D G3DSA:2.40.128.110 25 191 7.8E-46 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS11865 d81ae9f21db14fd4c016392074d8ffe7 191 Pfam PF04264 YceI-like domain 26 188 4.3E-33 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS11865 d81ae9f21db14fd4c016392074d8ffe7 191 SUPERFAMILY SSF101874 26 191 9.94E-44 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 7.6E-163 T 06-07-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 1.8E-72 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 Pfam PF02441 Flavoprotein 6 133 2.6E-30 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 Gene3D G3DSA:3.40.50.10300 184 404 7.6E-87 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 Gene3D G3DSA:3.40.50.1950 3 181 5.7E-62 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 SUPERFAMILY SSF52507 3 179 1.83E-57 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS00590 5335a26908ca80acd18bd946ac03a73c 406 SUPERFAMILY SSF102645 184 401 2.09E-79 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 SUPERFAMILY SSF55073 349 494 3.53E-32 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 SMART SM00267 333 495 2.6E-38 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 31 304 1.1E-150 T 06-07-2017 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 Gene3D G3DSA:3.30.70.270 347 495 7.9E-32 T 06-07-2017 LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 2.3E-34 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 Gene3D G3DSA:3.30.450.20 202 240 5.7E-5 T 06-07-2017 LFZ55_RS13795 b7e99baaa3cb2a45662f481a56d684a2 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 495 2.2E-33 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 SUPERFAMILY SSF51306 17 134 1.03E-30 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 Pfam PF00717 Peptidase S24-like 59 118 6.1E-13 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 53 63 6.5E-11 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 64 75 6.5E-11 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 92 104 6.5E-11 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS25005 5dea6df43cdd3a0bdefd3aa448121c9a 140 Gene3D G3DSA:2.10.109.10 26 136 1.0E-40 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.1E-25 T 06-07-2017 IPR027470 Cation efflux protein, cytoplasmic domain LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 Pfam PF01545 Cation efflux family 14 206 2.9E-47 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 SUPERFAMILY SSF161111 8 207 1.7E-52 T 06-07-2017 LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 SUPERFAMILY SSF160240 209 288 3.53E-25 T 06-07-2017 LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 Gene3D G3DSA:3.30.70.1350 207 288 3.2E-31 T 06-07-2017 IPR027470 Cation efflux protein, cytoplasmic domain LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 1.6E-80 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 64.418 T 06-07-2017 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 LFZ55_RS23150 d18c6e4a1323e9ca01823d2adb9a982f 300 Gene3D G3DSA:1.20.1510.10 11 206 9.7E-47 T 06-07-2017 IPR027469 Cation efflux protein transmembrane domain LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.35 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 266 5.2E-5 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Pfam PF00005 ABC transporter 26 184 2.8E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Pfam PF00005 ABC transporter 302 454 2.0E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Gene3D G3DSA:3.40.50.300 274 526 5.3E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 Gene3D G3DSA:3.40.50.300 4 258 5.6E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 SUPERFAMILY SSF52540 5 256 4.87E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 SUPERFAMILY SSF52540 276 525 1.05E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 SMART SM00382 34 243 7.5E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08130 a8e12d7005c8839cd07010041a121211 529 SMART SM00382 311 502 2.6E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS09920 cc1f113274c7400caf74c79b3dec225c 272 Gene3D G3DSA:3.20.20.410 1 258 5.7E-70 T 06-07-2017 IPR002763 Protein of unknown function DUF72 LFZ55_RS09920 cc1f113274c7400caf74c79b3dec225c 272 Pfam PF01904 Protein of unknown function DUF72 21 248 1.3E-50 T 06-07-2017 IPR002763 Protein of unknown function DUF72 LFZ55_RS09920 cc1f113274c7400caf74c79b3dec225c 272 SUPERFAMILY SSF117396 1 252 9.02E-63 T 06-07-2017 IPR002763 Protein of unknown function DUF72 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 Gene3D G3DSA:3.50.50.60 106 300 4.3E-43 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 SUPERFAMILY SSF51905 3 301 6.56E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 3.5E-14 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 3.5E-14 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.5E-14 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 3.5E-14 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 Gene3D G3DSA:3.50.50.60 3 105 2.1E-17 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.6E-19 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.6E-19 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 6.6E-19 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 6.6E-19 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 6.6E-19 T 06-07-2017 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 56.524 T 06-07-2017 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 LFZ55_RS05200 a46a075efabb8ce9d136cc0e7a62e4a0 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.9E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 SUPERFAMILY SSF53187 188 284 1.41E-53 T 06-07-2017 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 SUPERFAMILY SSF53187 331 407 1.41E-53 T 06-07-2017 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 8.0E-52 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 SMART SM00646 250 404 3.5E-70 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 Gene3D G3DSA:3.40.630.40 332 407 1.3E-60 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 Gene3D G3DSA:3.40.630.40 188 285 1.3E-60 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS04485 d3a7d3cf6862ceb582897df60b071181 417 Pfam PF11741 AMIN domain 39 142 9.4E-27 T 06-07-2017 IPR021731 AMIN domain LFZ55_RS00820 e5a3bee3f8167763587f46ddfed6d239 293 Gene3D G3DSA:3.30.420.40 105 290 2.2E-56 T 06-07-2017 LFZ55_RS00820 e5a3bee3f8167763587f46ddfed6d239 293 Pfam PF00480 ROK family 4 288 5.2E-52 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS00820 e5a3bee3f8167763587f46ddfed6d239 293 SUPERFAMILY SSF53067 1 290 3.75E-60 T 06-07-2017 LFZ55_RS00820 e5a3bee3f8167763587f46ddfed6d239 293 Gene3D G3DSA:3.30.420.40 1 104 5.8E-25 T 06-07-2017 LFZ55_RS03810 33dd0636d3af2f5875195d288138f583 197 SUPERFAMILY SSF52972 1 195 2.2E-74 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS03810 33dd0636d3af2f5875195d288138f583 197 Pfam PF01725 Ham1 family 4 191 2.1E-55 T 06-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 LFZ55_RS03810 33dd0636d3af2f5875195d288138f583 197 Gene3D G3DSA:3.90.950.10 1 195 4.8E-83 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS03810 33dd0636d3af2f5875195d288138f583 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.46 T 06-07-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LFZ55_RS03810 33dd0636d3af2f5875195d288138f583 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 6.0E-70 T 06-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 Pfam PF00005 ABC transporter 352 500 7.3E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 SMART SM00382 361 547 6.9E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 SUPERFAMILY SSF90123 7 327 1.11E-70 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 Gene3D G3DSA:3.40.50.300 341 561 1.2E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 Gene3D G3DSA:1.20.1560.10 7 319 1.4E-70 T 06-07-2017 LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 SUPERFAMILY SSF52540 329 572 1.36E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18160 db9010817bfe4bf2553d9470363a6b7a 590 Pfam PF00664 ABC transporter transmembrane region 22 291 1.8E-37 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 SUPERFAMILY SSF47928 3 104 4.84E-28 T 06-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 2.6E-51 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.0E-28 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.0E-28 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.0E-28 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.0E-28 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.0E-28 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.2E-67 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 Gene3D G3DSA:1.10.520.20 3 104 1.2E-35 T 06-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 LFZ55_RS24075 5f7e589571d078d3d946a3b77b83a52f 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 06-07-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 PIRSF PIRSF005963 3 321 7.7E-131 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 Gene3D G3DSA:3.20.20.70 55 312 1.6E-71 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 SMART SM00729 84 293 1.4E-13 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.049 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 SUPERFAMILY SSF102114 52 316 1.26E-67 T 06-07-2017 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 8.9E-7 T 06-07-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.4E-162 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17400 b7f685cc7f5e2c0266fdb4cded1eefb7 321 Pfam PF04055 Radical SAM superfamily 91 251 1.5E-14 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS17795 34ef8b49e943fd5d50f7698811852b21 240 ProDom PD117946 FIMBRIAE Y REGULATORY FIMBRIA 15 240 3.0E-120 T 06-07-2017 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 43.995 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 SUPERFAMILY SSF55909 4 406 3.39E-132 T 06-07-2017 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 1.2E-43 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 PIRSF PIRSF006356 1 406 3.2E-148 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 TIGRFAM TIGR01078 arcA: arginine deiminase 6 406 2.3E-159 T 06-07-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 Pfam PF02274 Amidinotransferase 18 403 1.4E-93 T 06-07-2017 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 Gene3D G3DSA:3.75.10.10 149 406 1.5E-129 T 06-07-2017 LFZ55_RS21265 f4c276454283a49a12d687253435c2d7 406 Gene3D G3DSA:3.75.10.10 2 67 1.5E-129 T 06-07-2017 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 Gene3D G3DSA:3.40.50.1000 67 220 6.0E-51 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 Gene3D G3DSA:3.40.50.1000 13 54 3.2E-5 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.3E-9 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 1.3E-9 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.3E-9 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.3E-9 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 187 3.0E-18 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 187 2.3E-25 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS07595 d6b68938995c07b6420da455b2f5f9fe 225 SUPERFAMILY SSF56784 10 209 3.2E-46 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS12445 82091a898904a3ecf43f4b9045454a48 429 SUPERFAMILY SSF103473 4 414 4.71E-88 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12445 82091a898904a3ecf43f4b9045454a48 429 Gene3D G3DSA:1.20.1250.20 223 416 3.1E-34 T 06-07-2017 LFZ55_RS12445 82091a898904a3ecf43f4b9045454a48 429 Gene3D G3DSA:1.20.1250.20 7 199 4.6E-51 T 06-07-2017 LFZ55_RS12445 82091a898904a3ecf43f4b9045454a48 429 Pfam PF07690 Major Facilitator Superfamily 14 378 4.9E-60 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS12445 82091a898904a3ecf43f4b9045454a48 429 PIRSF PIRSF002808 2 426 1.3E-42 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS09855 cc2b795a5c1b0f8bc108e2996611037a 129 SMART SM00448 6 120 9.9E-35 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09855 cc2b795a5c1b0f8bc108e2996611037a 129 Gene3D G3DSA:3.40.50.2300 4 126 3.0E-38 T 06-07-2017 LFZ55_RS09855 cc2b795a5c1b0f8bc108e2996611037a 129 SUPERFAMILY SSF52172 5 125 1.71E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS09855 cc2b795a5c1b0f8bc108e2996611037a 129 Pfam PF00072 Response regulator receiver domain 9 120 4.6E-32 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 1.6E-89 T 06-07-2017 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 Pfam PF00005 ABC transporter 17 165 5.6E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 SMART SM00382 26 212 4.8E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 SUPERFAMILY SSF52540 2 226 4.61E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09145 4e98e50a797b32ceaa726aa97c2bee30 271 Gene3D G3DSA:3.40.50.300 1 234 1.3E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 SUPERFAMILY SSF160544 244 351 1.96E-41 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 Gene3D G3DSA:3.40.1690.10 218 355 6.7E-64 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 9.3E-125 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 354 8.3E-140 T 06-07-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.6E-43 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.6E-43 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.6E-43 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.6E-43 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS09865 c61fce71b884bdc9efcb8f7b631d2639 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.6E-43 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS20380 0caeba3f3d0b9105a54c5872791612d0 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 6.7E-66 T 06-07-2017 IPR002786 Non-canonical purine NTP phosphatase LFZ55_RS20380 0caeba3f3d0b9105a54c5872791612d0 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 28.779 T 06-07-2017 IPR002786 Non-canonical purine NTP phosphatase LFZ55_RS20380 0caeba3f3d0b9105a54c5872791612d0 171 SUPERFAMILY SSF52972 1 167 4.8E-54 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS20380 0caeba3f3d0b9105a54c5872791612d0 171 Gene3D G3DSA:3.90.950.10 2 168 1.0E-59 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS20380 0caeba3f3d0b9105a54c5872791612d0 171 Pfam PF01931 Protein of unknown function DUF84 7 166 4.0E-50 T 06-07-2017 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 Gene3D G3DSA:3.40.50.2000 480 795 2.3E-143 T 06-07-2017 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 06-07-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 SUPERFAMILY SSF53756 8 814 0.0 T 06-07-2017 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 Gene3D G3DSA:3.40.50.2000 11 479 1.2E-209 T 06-07-2017 LFZ55_RS01580 e52cb3e269b14cde48ae10da770c8470 815 PIRSF PIRSF000460 1 815 1.6E-236 T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 SUPERFAMILY SSF54719 95 204 1.17E-45 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 SUPERFAMILY SSF46609 1 90 7.07E-37 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 Gene3D G3DSA:1.10.287.990 20 90 2.0E-32 T 06-07-2017 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 06-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 PIRSF PIRSF000349 1 206 1.1E-81 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.2E-33 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23175 e39576d090bf438633c0d9166b1209d3 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 2.7E-41 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS17830 53b09b2068dd04a209ad6090a58a9540 185 SUPERFAMILY SSF49401 34 185 1.34E-37 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS17830 53b09b2068dd04a209ad6090a58a9540 185 Gene3D G3DSA:2.60.40.1090 33 185 6.5E-47 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS17830 53b09b2068dd04a209ad6090a58a9540 185 Pfam PF00419 Fimbrial protein 35 184 1.8E-23 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 Gene3D G3DSA:3.20.20.70 2 240 3.0E-64 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 SUPERFAMILY SSF51395 1 307 2.01E-71 T 06-07-2017 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.702 T 06-07-2017 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 PIRSF PIRSF006621 1 312 7.5E-86 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS08395 dd32db90d6418c71479bd86d108282bb 312 Pfam PF01207 Dihydrouridine synthase (Dus) 5 286 6.1E-92 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS03395 ae3423dc5fabab56698ffd88e105de28 153 SUPERFAMILY SSF54197 1 106 3.25E-28 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS03395 ae3423dc5fabab56698ffd88e105de28 153 Gene3D G3DSA:3.30.428.10 2 150 7.8E-26 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS03395 ae3423dc5fabab56698ffd88e105de28 153 Pfam PF01230 HIT domain 11 76 1.1E-10 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS03395 ae3423dc5fabab56698ffd88e105de28 153 PRINTS PR00332 Histidine triad family signature 4 20 7.4E-7 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS03395 ae3423dc5fabab56698ffd88e105de28 153 PRINTS PR00332 Histidine triad family signature 25 43 7.4E-7 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Pfam PF00999 Sodium/hydrogen exchanger family 16 387 5.4E-59 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 SUPERFAMILY SSF56176 497 571 1.45E-9 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Pfam PF03471 Transporter associated domain 493 571 4.6E-10 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Pfam PF02080 TrkA-C domain 420 483 1.5E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Gene3D G3DSA:3.30.465.10 497 571 1.0E-9 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 SMART SM01091 492 573 6.7E-16 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 49.86 T 06-07-2017 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 Gene3D G3DSA:3.30.70.1450 421 483 1.9E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS10535 1e8994a31467088d06c39f5a30fe5c13 577 SUPERFAMILY SSF116726 419 483 3.53E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Gene3D G3DSA:3.40.50.300 15 234 2.4E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Pfam PF13361 UvrD-like helicase C-terminal domain 431 524 1.1E-15 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Pfam PF13361 UvrD-like helicase C-terminal domain 228 375 8.7E-11 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 108 5.1E-11 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Pfam PF00580 UvrD/REP helicase N-terminal domain 133 221 1.2E-15 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Gene3D G3DSA:3.40.50.300 235 345 7.8E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 Gene3D G3DSA:3.40.50.300 468 529 7.8E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15330 e5c438aacce14541e8814dcdc46d1036 556 SUPERFAMILY SSF52540 13 526 1.13E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 Pfam PF01464 Transglycosylase SLT domain 197 320 2.2E-31 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 Gene3D G3DSA:1.10.530.10 188 359 7.3E-40 T 06-07-2017 LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 SUPERFAMILY SSF53955 192 358 2.73E-36 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 Pfam PF11873 Domain of unknown function (DUF3393) 3 192 6.1E-74 T 06-07-2017 IPR024570 Murein transglycosylase-C, N-terminal LFZ55_RS03765 d57cd0002f635d4bbc092acddb568bed 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 359 64.705 T 06-07-2017 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 LFZ55_RS00175 4ab8460a19afeddc93109ffbbd3207d7 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 3.5E-22 T 06-07-2017 IPR002068 Alpha crystallin/Hsp20 domain LFZ55_RS00175 4ab8460a19afeddc93109ffbbd3207d7 137 SUPERFAMILY SSF49764 30 137 6.28E-20 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS00175 4ab8460a19afeddc93109ffbbd3207d7 137 Gene3D G3DSA:2.60.40.790 5 137 1.3E-16 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS00175 4ab8460a19afeddc93109ffbbd3207d7 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 49.542 T 06-07-2017 IPR023728 Small heat shock protein IbpA LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 Gene3D G3DSA:2.40.280.10 13 133 5.9E-49 T 06-07-2017 IPR023620 Small protein B LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 72.346 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-69 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 06-07-2017 IPR020081 SsrA-binding protein, conserved site LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 SUPERFAMILY SSF74982 8 138 1.83E-50 T 06-07-2017 IPR023620 Small protein B LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 7.1E-54 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 LFZ55_RS05725 be2950e132d7de48417d60002e4ab940 160 Pfam PF01668 SmpB protein 13 74 9.4E-28 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Gene3D G3DSA:1.10.8.60 793 861 8.3E-10 T 06-07-2017 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SUPERFAMILY SSF52540 559 851 9.77E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Gene3D G3DSA:3.40.50.300 564 792 1.9E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 856 1.8E-11 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Pfam PF07724 AAA domain (Cdc48 subfamily) 610 775 2.9E-38 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 238 350 8.1E-9 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 7.8E-33 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 677 7.8E-33 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 614 632 7.8E-33 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 721 735 7.8E-33 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SUPERFAMILY SSF52540 196 520 4.31E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SUPERFAMILY SSF81923 12 125 1.44E-20 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 06-07-2017 IPR017729 Type VI secretion system, ATPase ClpV1 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Gene3D G3DSA:3.40.50.300 198 377 5.2E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SMART SM00382 610 781 5.0E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SMART SM00382 233 378 7.2E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 06-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 62 0.0011 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Gene3D G3DSA:1.10.1780.10 11 124 1.0E-18 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 Gene3D G3DSA:1.10.8.60 380 462 1.7E-30 T 06-07-2017 LFZ55_RS12350 fb846d00c46263e5227d3d2854995dad 885 SMART SM01086 781 874 6.6E-8 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.2 T 06-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 Pfam PF00551 Formyl transferase 1 181 6.2E-66 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 3.9E-81 T 06-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 06-07-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 Gene3D G3DSA:3.40.50.170 2 194 2.8E-70 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS06725 82196ba6b4b4ac3234bab3b93e5b85d6 212 SUPERFAMILY SSF53328 1 206 6.54E-66 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 Pfam PF00089 Trypsin 49 244 4.4E-9 T 06-07-2017 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 Gene3D G3DSA:2.40.10.10 54 165 8.2E-12 T 06-07-2017 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 PRINTS PR00839 V8 serine protease family signature 69 86 2.2E-20 T 06-07-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 PRINTS PR00839 V8 serine protease family signature 178 191 2.2E-20 T 06-07-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 PRINTS PR00839 V8 serine protease family signature 44 61 2.2E-20 T 06-07-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 PRINTS PR00839 V8 serine protease family signature 212 228 2.2E-20 T 06-07-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 PRINTS PR00839 V8 serine protease family signature 232 244 2.2E-20 T 06-07-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 SUPERFAMILY SSF50494 32 267 3.95E-30 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 06-07-2017 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 06-07-2017 IPR033116 Serine proteases, trypsin family, serine active site LFZ55_RS12785 ca130d780a8f06f89c4e21cb81fd913e 273 Gene3D G3DSA:2.40.10.10 179 244 2.7E-9 T 06-07-2017 LFZ55_RS16300 0d9bf32760c48a07b842cbbd73cb1c5d 350 SUPERFAMILY SSF56349 60 326 4.47E-42 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS16300 0d9bf32760c48a07b842cbbd73cb1c5d 350 Gene3D G3DSA:1.10.443.10 170 328 2.1E-35 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS16300 0d9bf32760c48a07b842cbbd73cb1c5d 350 Pfam PF00589 Phage integrase family 280 320 5.4E-11 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS16300 0d9bf32760c48a07b842cbbd73cb1c5d 350 Pfam PF00589 Phage integrase family 174 245 1.3E-9 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 SUPERFAMILY SSF103473 214 401 4.05E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 Gene3D G3DSA:1.20.1250.20 214 396 2.3E-28 T 06-07-2017 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 Gene3D G3DSA:1.20.1250.20 8 194 8.3E-36 T 06-07-2017 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 PRINTS PR01035 Tetracycline resistance protein signature 136 158 5.2E-11 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 PRINTS PR01035 Tetracycline resistance protein signature 341 364 5.2E-11 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 PRINTS PR01035 Tetracycline resistance protein signature 79 103 5.2E-11 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 PRINTS PR01035 Tetracycline resistance protein signature 17 33 5.2E-11 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 PRINTS PR01035 Tetracycline resistance protein signature 106 127 5.2E-11 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 Pfam PF07690 Major Facilitator Superfamily 11 302 1.6E-33 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS18525 a33f393f9a89165f3dc1f0d4afa222dd 403 SUPERFAMILY SSF103473 6 207 2.62E-38 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS20425 ba9bce7ffc9b527a62c86bd739d4588a 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 2.1E-65 T 06-07-2017 IPR019305 Uncharacterised protein family Smp LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Gene3D G3DSA:3.90.199.10 330 395 3.9E-105 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Gene3D G3DSA:3.90.199.10 27 234 3.9E-105 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Gene3D G3DSA:2.120.10.90 493 726 3.5E-26 T 06-07-2017 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 4.0E-135 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 SUPERFAMILY SSF56719 28 479 2.88E-154 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 06-07-2017 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 692 1.5E-8 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 4.4E-4 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.24 T 06-07-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 SUPERFAMILY SSF101904 494 736 5.62E-51 T 06-07-2017 LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 Gene3D G3DSA:3.30.1360.40 235 328 1.3E-25 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain LFZ55_RS03375 b574bf4ede0df3fcfea76e9acf7cde71 752 SMART SM00434 8 458 1.4E-240 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS23515 b435149b9d9e5936525d861de9acd9a3 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 06-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LFZ55_RS23515 b435149b9d9e5936525d861de9acd9a3 181 SUPERFAMILY SSF52218 2 172 1.05E-31 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS23515 b435149b9d9e5936525d861de9acd9a3 181 Gene3D G3DSA:3.40.50.360 105 177 4.0E-25 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS23515 b435149b9d9e5936525d861de9acd9a3 181 Gene3D G3DSA:3.40.50.360 2 73 4.0E-25 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS23515 b435149b9d9e5936525d861de9acd9a3 181 Pfam PF12724 Flavodoxin domain 4 152 3.3E-51 T 06-07-2017 IPR026816 Flavodoxin domain LFZ55_RS20645 9a2c0e39942f0c0bf3f2c7317df22030 321 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 318 2.8E-55 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS20645 9a2c0e39942f0c0bf3f2c7317df22030 321 Pfam PF04754 Putative transposase, YhgA-like 8 209 8.3E-87 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 SUPERFAMILY SSF54211 3 130 6.07E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.9E-15 T 06-07-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 06-07-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 Gene3D G3DSA:3.30.230.30 6 131 7.8E-43 T 06-07-2017 IPR001498 Impact, N-terminal LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 Gene3D G3DSA:3.30.70.240 135 204 2.4E-31 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 204 4.4E-84 T 06-07-2017 IPR015796 Impact family, bacterial/archaeal LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 SUPERFAMILY SSF54980 136 203 5.76E-18 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS23525 436802f06788475b5dec8d6359eea5f7 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 3.9E-26 T 06-07-2017 IPR001498 Impact, N-terminal LFZ55_RS04645 e609eb8fc47700b0d23f5c2b238c308a 380 PIRSF PIRSF006078 1 376 7.4E-138 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS04645 e609eb8fc47700b0d23f5c2b238c308a 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.7E-162 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS04645 e609eb8fc47700b0d23f5c2b238c308a 380 SUPERFAMILY SSF110738 1 375 5.36E-142 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS04645 e609eb8fc47700b0d23f5c2b238c308a 380 Pfam PF02595 Glycerate kinase family 3 373 2.6E-149 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS04645 e609eb8fc47700b0d23f5c2b238c308a 380 Gene3D G3DSA:3.90.1510.10 42 275 1.3E-97 T 06-07-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 4.1E-46 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 Gene3D G3DSA:3.90.1170.10 23 133 3.0E-52 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 9.6E-40 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 9.6E-40 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 9.6E-40 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 9.6E-40 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.894 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.4E-58 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 06-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 06-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02075 9ca18dc7b9b89f80a362850de52e64fc 136 SUPERFAMILY SSF54686 3 133 3.27E-54 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 1 327 52.137 T 06-07-2017 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 291 2.9E-17 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 SUPERFAMILY SSF111369 40 98 3.53E-9 T 06-07-2017 LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 Gene3D G3DSA:2.40.50.100 43 76 1.3E-15 T 06-07-2017 LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 Gene3D G3DSA:2.40.50.100 203 234 1.3E-15 T 06-07-2017 LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 SUPERFAMILY SSF111369 176 322 2.62E-13 T 06-07-2017 LFZ55_RS16530 8ae334fe309c9d1dfca59f02fd583e09 331 SUPERFAMILY SSF111369 112 170 1.96E-5 T 06-07-2017 LFZ55_RS05940 af059aab391d7fe5d149f00476aabbf1 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS05940 af059aab391d7fe5d149f00476aabbf1 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 54.506 T 06-07-2017 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 LFZ55_RS05940 af059aab391d7fe5d149f00476aabbf1 245 SUPERFAMILY SSF53335 15 172 1.02E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS05940 af059aab391d7fe5d149f00476aabbf1 245 Gene3D G3DSA:3.40.50.150 32 238 1.5E-37 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS05940 af059aab391d7fe5d149f00476aabbf1 245 Pfam PF05175 Methyltransferase small domain 45 129 5.8E-12 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 SUPERFAMILY SSF51735 12 267 4.91E-69 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.5E-30 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.5E-30 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 4.5E-30 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.5E-30 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.5E-30 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 Pfam PF00106 short chain dehydrogenase 13 205 1.4E-53 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 Gene3D G3DSA:3.40.50.720 9 267 1.4E-74 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.6E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS01280 4ff404f62a04a6fb0e9be3efba043ade 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.6E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 5.3E-87 T 06-07-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 5.4E-89 T 06-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 SMART SM00650 25 198 2.0E-83 T 06-07-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 Gene3D G3DSA:3.40.50.150 6 198 2.2E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.644 T 06-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 06-07-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 Gene3D G3DSA:1.10.8.100 201 266 1.4E-25 T 06-07-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 LFZ55_RS19945 d74d64309ac5b0a9ef94fe3f49ec5fd3 273 SUPERFAMILY SSF53335 17 266 1.25E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 234 254 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 255 275 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 57 82 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 115 142 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 83 108 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 143 170 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 186 207 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 208 229 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PRINTS PR00482 Omptin serine protease signature 38 52 1.0E-100 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 06-07-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 Gene3D G3DSA:2.40.128.90 24 312 2.0E-129 T 06-07-2017 IPR023619 Peptidase A26 GO:0004190 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 Pfam PF01278 Omptin family 31 312 4.0E-125 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 PIRSF PIRSF001522 1 312 1.8E-144 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 06-07-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 LFZ55_RS07285 0198dfd01344fc0b8e45e58455f60df4 312 SUPERFAMILY SSF69917 25 312 1.44E-107 T 06-07-2017 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 LFZ55_RS01445 a1438c23170608c9e9f1203dd4de6920 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 2.2E-58 T 06-07-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LFZ55_RS01445 a1438c23170608c9e9f1203dd4de6920 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 4.1E-25 T 06-07-2017 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 SUPERFAMILY SSF56801 15 532 2.09E-124 T 06-07-2017 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 4.5E-267 T 06-07-2017 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 3.3E-11 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Gene3D G3DSA:3.30.300.30 432 533 1.3E-26 T 06-07-2017 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Gene3D G3DSA:3.40.50.980 36 191 6.9E-26 T 06-07-2017 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Pfam PF00501 AMP-binding enzyme 36 437 2.3E-72 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Gene3D G3DSA:3.40.50.980 192 349 2.5E-31 T 06-07-2017 LFZ55_RS17585 dcac6623ba90e72eb26d533c646f1a13 536 Gene3D G3DSA:2.30.38.10 356 430 6.9E-23 T 06-07-2017 LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 Gene3D G3DSA:3.40.50.150 161 332 1.9E-28 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 4.2E-57 T 06-07-2017 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 SUPERFAMILY SSF53335 153 315 1.79E-32 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 Pfam PF05175 Methyltransferase small domain 167 333 1.7E-61 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 LFZ55_RS20505 e5b3a46da13ee8063a2c81a3f39734fc 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.776 T 06-07-2017 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS16780 2870ddeface903f964494f4f26e181a5 359 Pfam PF01032 FecCD transport family 41 354 1.5E-81 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS16780 2870ddeface903f964494f4f26e181a5 359 Gene3D G3DSA:1.10.3470.10 27 357 5.4E-95 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS16780 2870ddeface903f964494f4f26e181a5 359 SUPERFAMILY SSF81345 22 354 9.55E-77 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS22235 f871267869205aa9177f546bbad2f2ae 164 Gene3D G3DSA:2.20.200.10 2 36 1.8E-10 T 06-07-2017 LFZ55_RS22235 f871267869205aa9177f546bbad2f2ae 164 SUPERFAMILY SSF56954 2 158 3.66E-25 T 06-07-2017 LFZ55_RS22235 f871267869205aa9177f546bbad2f2ae 164 Pfam PF02321 Outer membrane efflux protein 31 133 2.2E-7 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS22235 f871267869205aa9177f546bbad2f2ae 164 Gene3D G3DSA:1.20.1600.10 37 155 4.6E-17 T 06-07-2017 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 10 484 2.1E-242 T 06-07-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 Gene3D G3DSA:3.30.1730.10 3 170 1.5E-64 T 06-07-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 166 5.3E-53 T 06-07-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 60.0 T 06-07-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 Pfam PF01048 Phosphorylase superfamily 266 431 1.5E-18 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 Gene3D G3DSA:3.40.50.1580 174 466 2.4E-118 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS09400 8851f9c762abb98cd7bc80c5dcead4f2 484 SUPERFAMILY SSF53167 9 484 1.36E-161 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Pfam PF03288 Poxvirus D5 protein-like 670 769 2.7E-21 T 06-07-2017 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SMART SM00885 336 463 3.4E-18 T 06-07-2017 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SMART SM00493 208 283 9.1E-5 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SUPERFAMILY SSF52540 431 619 6.7E-18 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Gene3D G3DSA:1.10.10.10 671 769 8.9E-44 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Gene3D G3DSA:3.40.1360.10 205 309 1.3E-7 T 06-07-2017 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SMART SM00778 30 66 5.3E-21 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Pfam PF08706 D5 N terminal like 381 467 1.0E-7 T 06-07-2017 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SUPERFAMILY SSF57783 7 89 6.8E-9 T 06-07-2017 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Gene3D G3DSA:3.90.580.10 29 85 1.4E-4 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Pfam PF13362 Toprim domain 210 300 3.4E-11 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Pfam PF08273 Zinc-binding domain of primase-helicase 31 66 2.5E-18 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 Gene3D G3DSA:3.40.50.300 459 646 3.8E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05645 2d876772a31e2522541d5eef063c43ee 777 SUPERFAMILY SSF46785 671 769 6.26E-40 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 Gene3D G3DSA:1.10.8.10 1 84 2.1E-29 T 06-07-2017 LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 5.1E-92 T 06-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 Pfam PF13847 Methyltransferase domain 109 245 5.4E-23 T 06-07-2017 IPR025714 Methyltransferase domain LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 SUPERFAMILY SSF53335 4 273 7.49E-65 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 46.765 T 06-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 2.6E-99 T 06-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LFZ55_RS10880 2dbb7666095e30a66083fa5ddc6ecae1 277 Gene3D G3DSA:3.40.50.150 86 274 3.5E-72 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 Pfam PF03466 LysR substrate binding domain 99 306 2.4E-28 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 4.8E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 4.8E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 4.8E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 Gene3D G3DSA:1.10.10.10 12 95 1.9E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 Gene3D G3DSA:3.40.190.10 98 186 4.5E-13 T 06-07-2017 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.1E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 SUPERFAMILY SSF46785 17 123 2.18E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 SUPERFAMILY SSF53850 99 306 6.15E-31 T 06-07-2017 LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 307 1.9E-172 T 06-07-2017 IPR011781 D-serine deaminase transcriptional activator LFZ55_RS00215 d878638281ca47cbc2b8adfa14e834b3 307 Gene3D G3DSA:3.40.190.10 187 274 6.2E-18 T 06-07-2017 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 Gene3D G3DSA:2.170.130.10 33 192 1.1E-39 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 747 1.1E-190 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 Gene3D G3DSA:2.40.170.20 196 747 1.8E-173 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 SUPERFAMILY SSF56935 68 747 5.29E-142 T 06-07-2017 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 180 1.2E-20 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS19410 677aa190df8b21edca21925c35ea2224 747 Pfam PF00593 TonB dependent receptor 510 745 5.3E-26 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 842 2.0E-304 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Gene3D G3DSA:3.40.50.620 406 639 2.7E-134 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Gene3D G3DSA:3.40.50.620 14 200 2.7E-134 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 SUPERFAMILY SSF52374 403 650 4.56E-136 T 06-07-2017 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 SUPERFAMILY SSF52374 3 202 4.56E-136 T 06-07-2017 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Gene3D G3DSA:1.10.730.10 644 789 2.5E-43 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Gene3D G3DSA:3.90.740.10 206 389 2.8E-57 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 935 21.327 T 06-07-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 SUPERFAMILY SSF50677 204 403 5.1E-55 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Pfam PF08264 Anticodon-binding domain of tRNA 687 841 7.3E-26 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Pfam PF06827 Zinc finger found in FPG and IleRS 904 932 1.4E-8 T 06-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 SUPERFAMILY SSF47323 654 935 1.78E-72 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 528 541 1.4E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.4E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.4E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.4E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 563 572 1.4E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LFZ55_RS20105 df81e1bcd63e979204857f15528be175 944 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 1.0E-236 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 Pfam PF04055 Radical SAM superfamily 151 325 2.4E-27 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 Pfam PF01938 TRAM domain 378 440 4.9E-21 T 06-07-2017 IPR002792 TRAM domain LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 06-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 SUPERFAMILY SSF102114 127 373 1.7E-63 T 06-07-2017 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.2E-29 T 06-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 SMART SM00729 147 367 8.5E-63 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 Gene3D G3DSA:3.80.30.20 146 380 2.0E-78 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.0E-221 T 06-07-2017 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.189 T 06-07-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 LFZ55_RS17260 8135e9ff392652a016ac5abf5995084b 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.3E-158 T 06-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LFZ55_RS02960 2c580de73aa2dfbf109e025c626648fb 176 Gene3D G3DSA:1.10.10.10 113 165 5.1E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02960 2c580de73aa2dfbf109e025c626648fb 176 SUPERFAMILY SSF46894 113 170 2.79E-6 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 Gene3D G3DSA:3.40.190.10 174 263 5.2E-24 T 06-07-2017 LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 Pfam PF03466 LysR substrate binding domain 90 294 1.1E-38 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 SUPERFAMILY SSF46785 7 85 1.87E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 Gene3D G3DSA:3.40.190.10 87 173 1.1E-6 T 06-07-2017 LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 SUPERFAMILY SSF53850 91 298 1.01E-42 T 06-07-2017 LFZ55_RS01165 0b8288aaf1033a533d08672012651664 300 Gene3D G3DSA:1.10.10.10 6 83 1.4E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Pfam PF00384 Molybdopterin oxidoreductase 2 377 2.0E-22 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Gene3D G3DSA:3.40.50.740 320 470 2.2E-60 T 06-07-2017 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 06-07-2017 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Gene3D G3DSA:3.40.228.10 1 108 3.8E-70 T 06-07-2017 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Gene3D G3DSA:3.40.228.10 152 261 3.8E-70 T 06-07-2017 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 SUPERFAMILY SSF50692 641 803 1.33E-44 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Gene3D G3DSA:2.40.40.20 602 803 1.8E-52 T 06-07-2017 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 2.8E-16 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS12155 d1b06dd0f2abe9446561e64ab5933c5f 803 SUPERFAMILY SSF53706 1 638 7.59E-235 T 06-07-2017 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 SUPERFAMILY SSF46458 1 142 6.98E-38 T 06-07-2017 IPR009050 Globin-like LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Gene3D G3DSA:3.40.50.80 259 394 1.5E-34 T 06-07-2017 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 SUPERFAMILY SSF63380 148 253 7.83E-29 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 1.6E-9 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Gene3D G3DSA:2.40.30.10 149 254 3.0E-32 T 06-07-2017 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 8.1E-16 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Gene3D G3DSA:1.10.490.10 2 140 5.9E-54 T 06-07-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.534 T 06-07-2017 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 SUPERFAMILY SSF52343 257 394 2.49E-36 T 06-07-2017 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 Pfam PF00042 Globin 7 102 1.1E-14 T 06-07-2017 IPR000971 Globin GO:0019825|GO:0020037 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.5E-6 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.5E-6 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 4.5E-6 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS06105 1eca419875317c5ebd56ff0b5fd947ce 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.5E-6 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 SMART SM00846 3 155 6.8E-82 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.927 T 06-07-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 Gene3D G3DSA:3.30.360.10 164 318 1.3E-63 T 06-07-2017 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 1.6E-195 T 06-07-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.1E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.1E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.1E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.1E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.1E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 2.1E-53 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 1.1E-110 T 06-07-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 SUPERFAMILY SSF51735 1 179 3.07E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 PIRSF PIRSF000149 1 337 7.8E-135 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 Gene3D G3DSA:3.40.50.720 1 163 1.5E-65 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 SUPERFAMILY SSF55347 155 317 1.13E-59 T 06-07-2017 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 06-07-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03975 1b5d759f69f630f8c27cdb4ec202369a 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.2E-55 T 06-07-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS10160 78b347bb7ce5867148a63a25bcd03011 139 Gene3D G3DSA:2.40.50.110 19 132 3.6E-32 T 06-07-2017 LFZ55_RS10160 78b347bb7ce5867148a63a25bcd03011 139 SUPERFAMILY SSF50203 20 132 5.86E-33 T 06-07-2017 IPR008992 Enterotoxin GO:0009405 LFZ55_RS10505 8656c2aa31b9fc41b2949b41a9a88380 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.614 T 06-07-2017 IPR022920 Disulphide bond formation protein DsbB LFZ55_RS10505 8656c2aa31b9fc41b2949b41a9a88380 176 Gene3D G3DSA:1.20.1550.10 1 174 1.7E-71 T 06-07-2017 IPR023380 Disulphide bond formation protein DsbB-like domain LFZ55_RS10505 8656c2aa31b9fc41b2949b41a9a88380 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 5.1E-45 T 06-07-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 LFZ55_RS10505 8656c2aa31b9fc41b2949b41a9a88380 176 SUPERFAMILY SSF158442 15 159 5.49E-45 T 06-07-2017 LFZ55_RS03370 7431bf88a5aec464e437f6b44944549a 130 SUPERFAMILY SSF101756 31 127 6.28E-36 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS03370 7431bf88a5aec464e437f6b44944549a 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 128 3.0E-61 T 06-07-2017 IPR016052 Bacteriophage 933W, L0136 LFZ55_RS03370 7431bf88a5aec464e437f6b44944549a 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 6.0E-45 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS03370 7431bf88a5aec464e437f6b44944549a 130 Gene3D G3DSA:2.40.50.200 30 128 2.0E-43 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS08470 71939daf53a7f484c6b36611d6bf6c75 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 4.8E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08470 71939daf53a7f484c6b36611d6bf6c75 243 SUPERFAMILY SSF46955 3 91 2.52E-19 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS08470 71939daf53a7f484c6b36611d6bf6c75 243 SMART SM00422 4 73 1.1E-27 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08470 71939daf53a7f484c6b36611d6bf6c75 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08470 71939daf53a7f484c6b36611d6bf6c75 243 Gene3D G3DSA:1.10.1660.10 4 87 8.8E-20 T 06-07-2017 LFZ55_RS15885 df0789ea9cc20f0c3dac5b329188eace 286 PIRSF PIRSF006232 3 286 2.8E-90 T 06-07-2017 IPR012093 Pirin LFZ55_RS15885 df0789ea9cc20f0c3dac5b329188eace 286 Pfam PF02678 Pirin 21 127 6.7E-36 T 06-07-2017 IPR003829 Pirin, N-terminal domain LFZ55_RS15885 df0789ea9cc20f0c3dac5b329188eace 286 SUPERFAMILY SSF51182 2 285 3.34E-84 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS15885 df0789ea9cc20f0c3dac5b329188eace 286 Gene3D G3DSA:2.60.120.10 7 257 9.7E-82 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS15885 df0789ea9cc20f0c3dac5b329188eace 286 Pfam PF05726 Pirin C-terminal cupin domain 182 284 5.5E-32 T 06-07-2017 IPR008778 Pirin, C-terminal domain LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 PIRSF PIRSF002936 1 302 2.3E-155 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.8E-168 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 Gene3D G3DSA:3.40.50.620 244 253 4.9E-63 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 Gene3D G3DSA:3.40.50.620 2 210 4.9E-63 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 SUPERFAMILY SSF52402 6 209 3.26E-74 T 06-07-2017 LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.439 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 LFZ55_RS04775 6de425b32060a71e26c4dc80644a3770 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 6.3E-66 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 Pfam PF01578 Cytochrome C assembly protein 27 184 4.6E-31 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07965 bbfcb1cbf78e819964c64718c8882846 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 1.3E-82 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 Pfam PF01578 Cytochrome C assembly protein 27 184 4.6E-31 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 5.3E-62 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00130 bbfcb1cbf78e819964c64718c8882846 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 1.3E-82 T 06-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS05960 33ba59449a6e430727772ca291d2d136 216 PIRSF PIRSF016938 1 205 2.5E-35 T 06-07-2017 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 LFZ55_RS05960 33ba59449a6e430727772ca291d2d136 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 2.2E-25 T 06-07-2017 IPR005573 Anti sigma-E protein RseA, C-terminal LFZ55_RS05960 33ba59449a6e430727772ca291d2d136 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 3.9E-38 T 06-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LFZ55_RS05960 33ba59449a6e430727772ca291d2d136 216 SUPERFAMILY SSF89069 1 66 1.57E-22 T 06-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 Gene3D G3DSA:3.90.79.10 2 142 5.2E-32 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 Pfam PF00293 NUDIX domain 4 115 1.5E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.3E-6 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.3E-6 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS14095 ff7cc285c40c5ccf54da82f68b9df49f 153 SUPERFAMILY SSF55811 2 130 3.25E-30 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 SUPERFAMILY SSF51351 1 248 3.53E-92 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 06-07-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 7.9E-107 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 41.01 T 06-07-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 Gene3D G3DSA:3.20.20.70 1 250 7.6E-104 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS23120 26f862807234d48965d724322e146d47 255 Pfam PF00121 Triosephosphate isomerase 5 246 3.7E-94 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:4.10.1200.10 1 28 4.8E-19 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.5E-16 T 06-07-2017 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 2.4E-21 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 SUPERFAMILY SSF53706 4 1070 0.0 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:3.40.50.740 108 203 3.1E-6 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:3.40.50.740 593 778 5.7E-59 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:2.40.40.20 1054 1233 1.2E-45 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 SUPERFAMILY SSF50692 1082 1235 1.4E-47 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 06-07-2017 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:2.20.25.90 52 98 1.6E-32 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 7.5E-188 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:3.40.228.10 487 592 5.4E-80 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:3.40.228.10 218 336 5.4E-80 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 Gene3D G3DSA:3.90.55.10 779 836 2.7E-7 T 06-07-2017 LFZ55_RS10940 f2cc6e6eee4f12b82c32d066a29a1788 1247 SMART SM00926 43 105 1.6E-8 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 494 596 4.7E-30 T 06-07-2017 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 Gene3D G3DSA:3.55.50.10 118 210 5.1E-16 T 06-07-2017 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 Pfam PF05954 Phage late control gene D protein (GPD) 44 354 8.5E-47 T 06-07-2017 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 SUPERFAMILY SSF69255 385 474 1.44E-20 T 06-07-2017 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 517 1.1E-76 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 SUPERFAMILY SSF69279 26 208 5.78E-34 T 06-07-2017 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 515 1.2E-55 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 SUPERFAMILY SSF69279 210 384 5.27E-32 T 06-07-2017 LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 Gene3D G3DSA:2.40.50.230 393 474 2.1E-20 T 06-07-2017 IPR006531 Gp5 N-terminal LFZ55_RS15275 759874e659c7de072b38689c04caf50a 897 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 615 761 6.1E-52 T 06-07-2017 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 Gene3D G3DSA:3.40.50.2300 62 173 1.4E-41 T 06-07-2017 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 7.8E-18 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 SUPERFAMILY SSF47413 5 62 5.63E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 SUPERFAMILY SSF53822 63 316 7.92E-62 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 Gene3D G3DSA:1.10.260.40 4 59 1.1E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 06-07-2017 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 310 2.5E-31 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 Gene3D G3DSA:3.40.50.2300 174 330 9.6E-46 T 06-07-2017 LFZ55_RS01535 a469dd82680a16b375cde1613e86956c 331 SMART SM00354 5 75 2.0E-26 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 Pfam PF00672 HAMP domain 209 277 7.4E-14 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 SMART SM00304 228 280 1.0E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 306 328 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 SMART SM00319 51 190 1.5E-28 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 SUPERFAMILY SSF58104 248 529 4.71E-72 T 06-07-2017 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 527 1.4E-64 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 SMART SM00283 281 528 3.0E-84 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 Gene3D G3DSA:1.10.287.950 296 500 1.3E-60 T 06-07-2017 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 2.5E-60 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 2.5E-60 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 2.5E-60 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 2.5E-60 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 2.5E-60 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 Gene3D G3DSA:1.20.120.30 62 175 1.6E-9 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 Pfam PF02203 Tar ligand binding domain homologue 15 182 1.1E-34 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS11840 662ff21bff1d6e2c9ff7e153796fbbf7 541 SUPERFAMILY SSF47170 31 179 5.62E-27 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS12900 788df56d5ea87cee8d5357c48125fa14 371 SUPERFAMILY SSF51735 25 216 3.5E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12900 788df56d5ea87cee8d5357c48125fa14 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 30 146 3.9E-26 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS12900 788df56d5ea87cee8d5357c48125fa14 371 Gene3D G3DSA:3.30.360.10 156 364 1.7E-29 T 06-07-2017 LFZ55_RS12900 788df56d5ea87cee8d5357c48125fa14 371 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 159 266 3.2E-18 T 06-07-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12900 788df56d5ea87cee8d5357c48125fa14 371 Gene3D G3DSA:3.40.50.720 26 155 3.6E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 Pfam PF01026 TatD related DNase 4 255 1.5E-76 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 4.4E-95 T 06-07-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 Gene3D G3DSA:3.20.20.140 2 257 3.4E-86 T 06-07-2017 LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 SUPERFAMILY SSF51556 1 259 1.08E-86 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS14255 662e331a87006313db7e32455bf1a066 265 PIRSF PIRSF005902 1 259 5.4E-75 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Gene3D G3DSA:3.40.50.300 4 235 1.2E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Gene3D G3DSA:2.40.50.140 283 341 1.6E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Pfam PF08402 TOBE domain 278 348 1.3E-10 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 SUPERFAMILY SSF52540 4 242 1.03E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 SMART SM00382 29 212 7.3E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Pfam PF00005 ABC transporter 21 162 7.6E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Gene3D G3DSA:2.40.50.100 342 350 2.8E-7 T 06-07-2017 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 Gene3D G3DSA:2.40.50.100 240 282 2.8E-7 T 06-07-2017 LFZ55_RS01475 af4e7bf86c66d7f5c79246adbb19bf59 356 SUPERFAMILY SSF50331 237 355 5.59E-30 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 SMART SM00987 49 210 9.9E-42 T 06-07-2017 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 7.4E-89 T 06-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 SMART SM00986 49 210 9.9E-42 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 SUPERFAMILY SSF52141 5 221 5.45E-95 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 06-07-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.5E-27 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.359 T 06-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS05925 635bf1689ef56dafaf530352bff02bf3 229 Gene3D G3DSA:3.40.470.10 5 221 9.5E-101 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Gene3D G3DSA:2.40.30.10 173 297 2.2E-25 T 06-07-2017 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Pfam PF09107 Elongation factor SelB, winged helix 561 606 3.2E-19 T 06-07-2017 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Gene3D G3DSA:1.10.10.10 417 482 2.1E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Pfam PF09106 Elongation factor SelB, winged helix 425 481 9.2E-15 T 06-07-2017 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF50465 275 351 1.08E-5 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Pfam PF03144 Elongation factor Tu domain 2 189 256 5.6E-9 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF46785 489 547 2.2E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Gene3D G3DSA:3.40.50.300 3 161 3.4E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF46785 552 608 4.17E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Gene3D G3DSA:1.10.10.10 550 608 7.2E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF46785 418 485 5.44E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 608 1.1E-251 T 06-07-2017 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF50447 175 293 1.39E-21 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 SUPERFAMILY SSF52540 2 163 6.04E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00810 938ff1c0446e63b7c7f7c3d363bb4182 616 Pfam PF00009 Elongation factor Tu GTP binding domain 2 157 1.4E-30 T 06-07-2017 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.1E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.1E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 4.1E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 Pfam PF10502 Signal peptidase, peptidase S26 257 302 3.3E-7 T 06-07-2017 IPR019533 Peptidase S26 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 06-07-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 Gene3D G3DSA:2.10.109.10 76 154 6.4E-57 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 Gene3D G3DSA:2.10.109.10 264 309 6.4E-57 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 Pfam PF00717 Peptidase S24-like 86 159 1.4E-20 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 06-07-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 06-07-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 9.4E-26 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 260 305 4.5E-17 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 Gene3D G3DSA:2.170.230.10 155 263 9.2E-48 T 06-07-2017 IPR019766 Peptidase S26A, all-beta subdomain LFZ55_RS05985 25fb08f8d416e67fe9729fdc514d433e 324 SUPERFAMILY SSF51306 78 323 3.66E-85 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 260 8.1E-13 T 06-07-2017 LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 SUPERFAMILY SSF52833 41 99 2.65E-15 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 SUPERFAMILY SSF52833 126 162 2.65E-15 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 Gene3D G3DSA:3.40.30.10 41 179 1.5E-19 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 PIRSF PIRSF015753 5 324 2.0E-133 T 06-07-2017 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 Gene3D G3DSA:1.20.1050.10 180 288 4.6E-28 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 SUPERFAMILY SSF47616 176 324 5.99E-36 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS03050 b0793dc2c96a683b8a3db280de51f5e0 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 7.3E-22 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 PIRSF PIRSF004749 1 168 3.3E-55 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 Gene3D G3DSA:3.90.45.10 5 165 2.0E-63 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 PRINTS PR01576 Peptide deformylase signature 101 119 2.1E-38 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 PRINTS PR01576 Peptide deformylase signature 120 149 2.1E-38 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 PRINTS PR01576 Peptide deformylase signature 89 100 2.1E-38 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-38 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 SUPERFAMILY SSF56420 3 164 1.31E-61 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.104 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 Pfam PF01327 Polypeptide deformylase 4 152 1.7E-50 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS02210 94d965cb89d7233ed467a96315f9e4e0 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.0E-65 T 06-07-2017 IPR023635 Peptide deformylase LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 SUPERFAMILY SSF54862 25 72 2.13E-14 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Pfam PF13187 4Fe-4S dicluster domain 193 236 4.4E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 SUPERFAMILY SSF54862 174 240 6.51E-16 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Pfam PF00037 4Fe-4S binding domain 46 68 3.1E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Gene3D G3DSA:3.30.70.20 198 227 8.1E-15 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 52 63 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Gene3D G3DSA:3.30.70.20 25 59 2.4E-13 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Gene3D G3DSA:3.30.70.20 228 262 1.9E-5 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Pfam PF12800 4Fe-4S binding domain 16 36 0.22 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Gene3D G3DSA:1.10.1060.10 60 83 2.6E-8 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 Gene3D G3DSA:1.10.1060.10 171 197 2.6E-8 T 06-07-2017 LFZ55_RS06245 02c42bf98993cfddd3c7d8f1f0cf1bb0 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 222 233 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 SUPERFAMILY SSF51395 6 376 2.75E-98 T 06-07-2017 LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.4E-124 T 06-07-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 Gene3D G3DSA:3.20.20.70 6 376 3.4E-133 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.581 T 06-07-2017 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 PIRSF PIRSF000138 2 379 2.8E-120 T 06-07-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LFZ55_RS00760 f9e4999562460382491dfe04c2489a75 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 06-07-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 LFZ55_RS06935 47b0867118e9609cdf44e7fae1b9e2c4 467 PIRSF PIRSF036410 1 467 1.0E-211 T 06-07-2017 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related LFZ55_RS06935 47b0867118e9609cdf44e7fae1b9e2c4 467 Gene3D G3DSA:3.40.605.10 34 249 1.9E-25 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS06935 47b0867118e9609cdf44e7fae1b9e2c4 467 SUPERFAMILY SSF53720 35 458 7.98E-63 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS06935 47b0867118e9609cdf44e7fae1b9e2c4 467 Gene3D G3DSA:3.40.309.10 250 424 6.7E-25 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS06935 47b0867118e9609cdf44e7fae1b9e2c4 467 Pfam PF00171 Aldehyde dehydrogenase family 34 422 7.2E-31 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 SUPERFAMILY SSF51556 1 466 1.81E-163 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 Pfam PF02614 Glucuronate isomerase 1 465 5.1E-192 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 Gene3D G3DSA:1.10.2020.10 45 133 1.7E-38 T 06-07-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 Hamap MF_00675 Uronate isomerase [uxaC]. 1 467 44.882 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 Gene3D G3DSA:3.20.20.140 137 467 1.2E-135 T 06-07-2017 LFZ55_RS12655 eb2a636e2dcf6806a0c2675f89ce97e1 467 Gene3D G3DSA:3.20.20.140 3 43 1.2E-135 T 06-07-2017 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 78 2.6E-15 T 06-07-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 06-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 06-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LFZ55_RS00530 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.6E-15 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 06-07-2017 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 SUPERFAMILY SSF56784 1 265 1.63E-67 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 9.4E-27 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.4E-67 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 Gene3D G3DSA:3.40.50.1000 177 265 3.6E-55 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 Gene3D G3DSA:3.40.50.1000 1 72 3.6E-55 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 Gene3D G3DSA:3.30.1240.10 82 176 8.0E-17 T 06-07-2017 LFZ55_RS23630 e3c26622fcb4c42640901a42e2b447da 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.1E-62 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 6.8E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 6.8E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 6.8E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 Gene3D G3DSA:1.10.10.10 156 209 1.5E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 Gene3D G3DSA:3.40.50.2300 2 155 5.3E-29 T 06-07-2017 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 SUPERFAMILY SSF46894 146 209 8.84E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 SUPERFAMILY SSF52172 3 133 1.99E-28 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 SMART SM00421 147 204 1.8E-23 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 3.2E-24 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 Pfam PF00072 Response regulator receiver domain 6 117 4.1E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS17800 26d196dd753470ccfb19af5bc399432f 210 SMART SM00448 4 117 1.0E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 Pfam PF03498 Cytolethal distending toxin A/C domain 1 146 3.0E-36 T 06-07-2017 IPR003558 Cytolethal distending toxin A/C GO:0009405 LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 Gene3D G3DSA:2.80.10.50 1 148 1.2E-38 T 06-07-2017 LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 PRINTS PR01387 Cytolethal distending toxin A signature 116 130 9.5E-23 T 06-07-2017 IPR015957 Cytolethal distending toxin A LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 PRINTS PR01387 Cytolethal distending toxin A signature 25 39 9.5E-23 T 06-07-2017 IPR015957 Cytolethal distending toxin A LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 PRINTS PR01387 Cytolethal distending toxin A signature 3 20 9.5E-23 T 06-07-2017 IPR015957 Cytolethal distending toxin A LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 PRINTS PR01387 Cytolethal distending toxin A signature 89 103 9.5E-23 T 06-07-2017 IPR015957 Cytolethal distending toxin A LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 PRINTS PR01387 Cytolethal distending toxin A signature 47 59 9.5E-23 T 06-07-2017 IPR015957 Cytolethal distending toxin A LFZ55_RS11505 06356aed13be6d4c8641223779d9c367 188 SUPERFAMILY SSF50370 2 146 1.09E-29 T 06-07-2017 IPR000772 Ricin B, lectin domain LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 17 161 2.5E-95 T 06-07-2017 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 141 1.0E-7 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 Gene3D G3DSA:2.160.10.10 60 159 1.9E-22 T 06-07-2017 LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 PIRSF PIRSF000441 2 162 8.3E-44 T 06-07-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 SUPERFAMILY SSF51161 12 158 1.94E-30 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS08695 e87755fed93a213e34a1436eacc694cd 162 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS17685 e178710e84a3a879bc87f7758aeccfc2 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.5E-21 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS17685 e178710e84a3a879bc87f7758aeccfc2 107 Gene3D G3DSA:3.40.50.270 1 104 3.6E-36 T 06-07-2017 LFZ55_RS17685 e178710e84a3a879bc87f7758aeccfc2 107 SUPERFAMILY SSF52794 1 103 3.14E-33 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-24 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 06-07-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 Gene3D G3DSA:3.30.1320.10 1 78 1.6E-33 T 06-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.072 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 SUPERFAMILY SSF54565 1 76 8.5E-29 T 06-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05785 249e1fe0f0a45fae9c47aacdaf93ee43 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.6E-28 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS08550 19f77ff3edbe58e6add3faaeae6ba27c 321 Gene3D G3DSA:3.40.1190.20 18 316 1.2E-52 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08550 19f77ff3edbe58e6add3faaeae6ba27c 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS08550 19f77ff3edbe58e6add3faaeae6ba27c 321 Pfam PF00294 pfkB family carbohydrate kinase 19 306 7.4E-46 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS08550 19f77ff3edbe58e6add3faaeae6ba27c 321 SUPERFAMILY SSF53613 19 314 7.02E-52 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08550 19f77ff3edbe58e6add3faaeae6ba27c 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS09080 083cbd5928a064627c58edc3f9853e80 210 Pfam PF02570 Precorrin-8X methylmutase 10 205 3.2E-67 T 06-07-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LFZ55_RS09080 083cbd5928a064627c58edc3f9853e80 210 SUPERFAMILY SSF63965 9 208 3.27E-64 T 06-07-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LFZ55_RS09080 083cbd5928a064627c58edc3f9853e80 210 Gene3D G3DSA:3.40.50.10230 3 209 4.5E-75 T 06-07-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LFZ55_RS14925 0c65aaf26670796bb5823e6701cceecb 168 Pfam PF08534 Redoxin 42 147 2.0E-13 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 LFZ55_RS14925 0c65aaf26670796bb5823e6701cceecb 168 Gene3D G3DSA:3.40.30.10 17 155 5.9E-28 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14925 0c65aaf26670796bb5823e6701cceecb 168 SUPERFAMILY SSF52833 31 158 1.18E-28 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 Gene3D G3DSA:1.10.10.10 133 198 1.2E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 Gene3D G3DSA:3.40.50.2300 1 125 5.2E-10 T 06-07-2017 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 SUPERFAMILY SSF46894 133 198 2.62E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.3E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.3E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.3E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 1.9E-21 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 Pfam PF00072 Response regulator receiver domain 6 110 3.9E-5 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 SMART SM00421 139 196 9.0E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 SUPERFAMILY SSF52172 2 166 7.03E-8 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS01175 d8fa7792a397b88bd5c5f6b5356581c3 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS15150 f731c8e4889c1907a1712083a228c32e 577 Pfam PF06276 Ferric iron reductase FhuF-like transporter 395 553 3.1E-35 T 06-07-2017 IPR022770 Ferric iron reductase FhuF domain LFZ55_RS15150 f731c8e4889c1907a1712083a228c32e 577 Pfam PF04183 IucA / IucC family 130 372 7.4E-69 T 06-07-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 205 369 7.1E-61 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 Pfam PF05230 MASE2 domain 39 127 1.0E-27 T 06-07-2017 IPR007894 MASE2 LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 SMART SM00267 198 369 3.5E-62 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 Gene3D G3DSA:3.30.70.270 211 368 1.4E-45 T 06-07-2017 LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 SUPERFAMILY SSF55073 214 367 3.06E-44 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS18510 546b7574c4e00fe514f1b807f8d3acc1 370 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 365 5.9E-45 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00267 559 731 2.4E-64 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Gene3D G3DSA:3.30.450.20 300 438 2.7E-22 T 06-07-2017 LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Pfam PF08448 PAS fold 449 560 1.9E-9 T 06-07-2017 IPR013656 PAS fold-4 LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Gene3D G3DSA:3.30.70.270 571 734 3.1E-53 T 06-07-2017 LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SUPERFAMILY SSF55073 575 733 2.28E-47 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Gene3D G3DSA:3.30.450.20 440 557 3.6E-17 T 06-07-2017 LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Gene3D G3DSA:3.20.20.450 780 987 8.0E-25 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 568 730 3.0E-39 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Pfam PF00990 Diguanylate cyclase, GGDEF domain 570 726 1.2E-44 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00091 443 511 5.3E-7 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00091 302 368 9.4E-9 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00086 517 559 0.0017 T 06-07-2017 IPR001610 PAC motif LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00086 375 417 1.8E-9 T 06-07-2017 IPR001610 PAC motif LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SUPERFAMILY SSF141868 780 988 1.7E-23 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SMART SM00052 742 986 4.4E-20 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SUPERFAMILY SSF55785 309 419 1.39E-19 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Pfam PF05231 MASE1 19 295 1.7E-47 T 06-07-2017 IPR007895 MASE1 LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 SUPERFAMILY SSF55785 432 557 8.05E-18 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Pfam PF00563 EAL domain 777 980 4.9E-23 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 441 564 2.3E-14 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 423 1.1E-29 T 06-07-2017 IPR000014 PAS domain LFZ55_RS08640 c99ced2ec0161eed61b9c989434b5f45 996 Pfam PF08447 PAS fold 326 408 2.7E-9 T 06-07-2017 IPR013655 PAS fold-3 GO:0005515 LFZ55_RS00305 5a28675a715ffda6b1f35565ae016084 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 1.7E-69 T 06-07-2017 IPR009587 Protein of unknown function DUF1198 LFZ55_RS00305 5a28675a715ffda6b1f35565ae016084 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 4.0E-79 T 06-07-2017 IPR009587 Protein of unknown function DUF1198 LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 Pfam PF01380 SIS domain 128 257 1.9E-30 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 Gene3D G3DSA:3.40.50.10490 101 263 3.8E-33 T 06-07-2017 LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 SUPERFAMILY SSF46689 1 77 1.34E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 7.8E-28 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 Gene3D G3DSA:1.10.10.10 1 78 1.8E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06025 7e3674ce7f8f2168337072825bebcfeb 282 SUPERFAMILY SSF53697 104 279 8.58E-34 T 06-07-2017 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 2.9E-50 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 SUPERFAMILY SSF50891 26 189 1.31E-58 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 1.7E-10 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 1.7E-10 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 1.7E-10 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 06-07-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LFZ55_RS01825 227c9a0e8b8d3629fe328b6e94c9f52c 190 Gene3D G3DSA:2.40.100.10 27 189 7.5E-56 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 167 5.4E-29 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 734 751 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 Pfam PF00593 TonB dependent receptor 465 749 1.6E-35 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 SUPERFAMILY SSF56935 38 751 4.27E-137 T 06-07-2017 LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 751 6.0E-142 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 Gene3D G3DSA:2.170.130.10 54 169 3.3E-37 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS17640 d0bf163bb4fd43939692c87188303be2 751 Gene3D G3DSA:2.40.170.20 170 751 1.1E-122 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 2.3E-73 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 SUPERFAMILY SSF53178 3 192 1.57E-70 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.266 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 06-07-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 1.2E-53 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 06-07-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LFZ55_RS10840 e97f6d74cc80f0449e20c294a7e94c0b 194 Gene3D G3DSA:3.40.50.1470 3 192 1.5E-71 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Pfam PF02080 TrkA-C domain 229 281 1.4E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Pfam PF02080 TrkA-C domain 305 371 2.4E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.899 T 06-07-2017 IPR023017 Transport protein YbjL, putative LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 5.6E-45 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 3.2E-37 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Gene3D G3DSA:3.30.70.1450 229 282 2.0E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 SUPERFAMILY SSF116726 227 282 1.7E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Pfam PF06826 Predicted Permease Membrane Region 385 554 9.5E-43 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 6.8E-40 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 SUPERFAMILY SSF116726 291 374 4.45E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS16100 02609ff93d1588a61554e994c4bbcd12 561 Gene3D G3DSA:3.30.70.1450 303 374 1.9E-6 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS04265 7d19631d81869989ee1f9c046430ce7b 355 Gene3D G3DSA:2.60.40.1090 216 355 1.3E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS04265 7d19631d81869989ee1f9c046430ce7b 355 Pfam PF00419 Fimbrial protein 216 354 2.0E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS04265 7d19631d81869989ee1f9c046430ce7b 355 SUPERFAMILY SSF49401 215 355 1.54E-8 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 SUPERFAMILY SSF56176 18 282 3.45E-55 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.2E-63 T 06-07-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Gene3D G3DSA:3.30.465.10 110 282 9.5E-43 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 SUPERFAMILY SSF55103 257 542 5.56E-55 T 06-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Pfam PF01565 FAD binding domain 52 192 1.2E-36 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Gene3D G3DSA:1.10.1060.10 517 619 6.5E-14 T 06-07-2017 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Gene3D G3DSA:1.10.1060.10 654 706 6.5E-14 T 06-07-2017 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Gene3D G3DSA:3.30.43.10 2 109 2.3E-30 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 SUPERFAMILY SSF46548 654 691 1.96E-8 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 SUPERFAMILY SSF46548 516 622 1.96E-8 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS13395 76a1d20775a70dd9cb609bf7c9b844fc 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 5.1E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS01100 529bb8070aead641ae71905725612942 874 Gene3D G3DSA:3.90.550.10 273 507 3.2E-22 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01100 529bb8070aead641ae71905725612942 874 Pfam PF07238 PilZ domain 694 790 8.9E-13 T 06-07-2017 IPR009875 PilZ domain GO:0035438 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 830 0.0 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 3.7E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 SUPERFAMILY SSF141371 695 777 2.94E-9 T 06-07-2017 LFZ55_RS01100 529bb8070aead641ae71905725612942 874 SUPERFAMILY SSF53448 272 550 7.16E-51 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01100 529bb8070aead641ae71905725612942 874 Pfam PF00535 Glycosyl transferase family 2 276 446 5.9E-35 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 SUPERFAMILY SSF50692 674 824 2.22E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Gene3D G3DSA:2.40.40.20 654 816 8.7E-53 T 06-07-2017 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 49 823 0.0 T 06-07-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Gene3D G3DSA:3.90.55.10 508 610 6.1E-32 T 06-07-2017 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Pfam PF00384 Molybdopterin oxidoreductase 92 564 2.1E-83 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Gene3D G3DSA:3.40.228.10 188 399 4.1E-52 T 06-07-2017 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Pfam PF01568 Molydopterin dinucleotide binding domain 680 801 4.6E-19 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Gene3D G3DSA:3.40.50.740 84 187 1.0E-44 T 06-07-2017 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 Gene3D G3DSA:3.40.50.740 400 507 1.0E-44 T 06-07-2017 LFZ55_RS08190 4510f57616c88609892f70d22ff548f7 832 SUPERFAMILY SSF53706 51 665 1.26E-159 T 06-07-2017 LFZ55_RS16990 cc92f9d052439a2285a7f9379e918ba1 377 Pfam PF00534 Glycosyl transferases group 1 186 353 4.4E-27 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS16990 cc92f9d052439a2285a7f9379e918ba1 377 Gene3D G3DSA:3.40.50.2000 189 353 1.6E-16 T 06-07-2017 LFZ55_RS16990 cc92f9d052439a2285a7f9379e918ba1 377 Gene3D G3DSA:3.40.50.2000 61 113 1.1E-4 T 06-07-2017 LFZ55_RS16990 cc92f9d052439a2285a7f9379e918ba1 377 Pfam PF13477 Glycosyl transferase 4-like 3 124 1.3E-18 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS16990 cc92f9d052439a2285a7f9379e918ba1 377 SUPERFAMILY SSF53756 21 375 1.02E-56 T 06-07-2017 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 SUPERFAMILY SSF53067 13 133 6.48E-36 T 06-07-2017 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 PIRSF PIRSF001267 4 506 5.1E-208 T 06-07-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 SUPERFAMILY SSF53067 137 310 9.78E-47 T 06-07-2017 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 2.1E-96 T 06-07-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 8.6E-102 T 06-07-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 SUPERFAMILY SSF109604 313 506 5.76E-57 T 06-07-2017 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 Gene3D G3DSA:3.30.420.150 132 311 1.1E-52 T 06-07-2017 LFZ55_RS06715 0ef481d21be5f15a5f6fe7b6b580d9a4 513 Gene3D G3DSA:3.30.420.40 6 131 5.8E-43 T 06-07-2017 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 Gene3D G3DSA:3.90.1150.10 3 59 3.9E-41 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 Gene3D G3DSA:3.90.1150.10 320 423 3.9E-41 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 SUPERFAMILY SSF53383 20 423 2.39E-134 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 1.8E-160 T 06-07-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 Pfam PF00202 Aminotransferase class-III 17 420 2.0E-139 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 Gene3D G3DSA:3.40.640.10 60 318 2.0E-83 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS05465 1b0bf5f758a509124bc52bcd2bf79ae3 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 Gene3D G3DSA:3.30.420.40 225 376 2.0E-48 T 06-07-2017 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 Gene3D G3DSA:3.30.420.40 85 224 4.0E-33 T 06-07-2017 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 Gene3D G3DSA:1.10.10.10 14 79 1.6E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 Pfam PF00480 ROK family 89 392 7.6E-98 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 SUPERFAMILY SSF53067 88 394 8.64E-54 T 06-07-2017 LFZ55_RS17195 ff5d9c49d395f0580dcdc985754486e3 406 SUPERFAMILY SSF46785 14 79 2.31E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 PRINTS PR00969 Pili chaperone signature 135 150 3.4E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 PRINTS PR00969 Pili chaperone signature 112 129 3.4E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 PRINTS PR00969 Pili chaperone signature 84 105 3.4E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 PRINTS PR00969 Pili chaperone signature 33 42 3.4E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 PRINTS PR00969 Pili chaperone signature 170 185 3.4E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 SUPERFAMILY SSF49354 27 153 5.76E-34 T 06-07-2017 IPR008962 PapD-like LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 SUPERFAMILY SSF49584 147 234 6.54E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 231 2.0E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 32 153 2.3E-34 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 Gene3D G3DSA:2.60.40.360 32 154 1.8E-35 T 06-07-2017 IPR008962 PapD-like LFZ55_RS20185 7f2f41c899248f9a171c20fcb29108f4 252 Gene3D G3DSA:2.60.40.1070 156 235 2.6E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 SUPERFAMILY SSF52540 137 167 1.02E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 SUPERFAMILY SSF52540 200 464 1.02E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 SUPERFAMILY SSF52540 4 164 1.14E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.698 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 5.1E-25 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 8.3E-29 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 202 368 5.2E-23 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.2E-21 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 PIRSF PIRSF006485 1 466 1.6E-180 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 6.1E-27 T 06-07-2017 IPR032859 GTPase Der, C-terminal KH-domain-like LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Gene3D G3DSA:3.30.300.20 384 459 3.3E-24 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Gene3D G3DSA:3.40.50.300 3 159 2.7E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 Gene3D G3DSA:3.40.50.300 201 383 2.1E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06290 d32d561e6676ea1a0ae6c43333aa81d6 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 3.6E-180 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SUPERFAMILY SSF47384 223 303 9.02E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SUPERFAMILY SSF158472 188 236 4.05E-9 T 06-07-2017 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 Gene3D G3DSA:3.30.565.10 307 461 1.3E-37 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.5E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.5E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.5E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.5E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 6.9E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SMART SM00388 240 304 1.2E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SUPERFAMILY SSF55874 293 459 2.1E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 3.7E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SMART SM00304 187 239 3.7E-14 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 SMART SM00387 349 461 1.3E-33 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 Gene3D G3DSA:1.10.287.130 232 299 3.2E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS08600 77712f03f464fd8f67ebfe43d6f20c48 467 Pfam PF00672 HAMP domain 168 235 3.9E-16 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS14330 246b741fb3cd5b05658665e8dd93fc97 82 ProDom PD078424 YCEQ 1 82 3.0E-43 T 06-07-2017 IPR020371 Uncharacterised protein family YceQ LFZ55_RS14330 246b741fb3cd5b05658665e8dd93fc97 82 Pfam PF10848 Protein of unknown function (DUF2655) 1 82 4.6E-43 T 06-07-2017 IPR020371 Uncharacterised protein family YceQ LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Pfam PF13534 4Fe-4S dicluster domain 264 324 1.7E-7 T 06-07-2017 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 PIRSF PIRSF036408 12 451 4.1E-190 T 06-07-2017 IPR017054 Propanediol utilization protein, PduS, predicted LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 264 275 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 SUPERFAMILY SSF142984 172 240 1.7E-13 T 06-07-2017 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 SUPERFAMILY SSF46548 214 341 1.59E-12 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Gene3D G3DSA:1.10.1060.10 249 341 2.7E-10 T 06-07-2017 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Pfam PF13375 RnfC Barrel sandwich hybrid domain 385 446 4.2E-15 T 06-07-2017 IPR026902 RnfC Barrel sandwich hybrid domain LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 21 160 3.0E-40 T 06-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 SUPERFAMILY SSF142019 9 178 1.7E-46 T 06-07-2017 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Pfam PF10531 SLBB domain 174 219 1.8E-11 T 06-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08980 7099404f83e1848e620c8cad82549f35 451 Gene3D G3DSA:2.40.50.100 406 442 4.8E-4 T 06-07-2017 LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 SUPERFAMILY SSF53850 94 299 9.95E-40 T 06-07-2017 LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 Gene3D G3DSA:3.40.190.10 97 180 2.9E-19 T 06-07-2017 LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-14 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 Pfam PF03466 LysR substrate binding domain 93 296 2.3E-35 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 Gene3D G3DSA:1.10.10.10 9 91 7.8E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 Gene3D G3DSA:3.40.190.10 181 265 1.4E-23 T 06-07-2017 LFZ55_RS03220 af3ae8a2bd6e3b45d5412b77d8d35a32 313 SUPERFAMILY SSF46785 9 115 3.67E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10240 0a9a7542d6e398bfc236b2913cdc742b 131 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 1 131 5.0E-64 T 06-07-2017 IPR009833 Uncharacterised protein DUF1398 LFZ55_RS10240 0a9a7542d6e398bfc236b2913cdc742b 131 Pfam PF07166 Protein of unknown function (DUF1398) 9 126 1.9E-44 T 06-07-2017 IPR009833 Uncharacterised protein DUF1398 LFZ55_RS10240 0a9a7542d6e398bfc236b2913cdc742b 131 SUPERFAMILY SSF160419 6 127 3.79E-40 T 06-07-2017 IPR009833 Uncharacterised protein DUF1398 LFZ55_RS10240 0a9a7542d6e398bfc236b2913cdc742b 131 Gene3D G3DSA:3.30.1810.10 1 127 1.1E-52 T 06-07-2017 IPR009833 Uncharacterised protein DUF1398 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 Pfam PF00455 DeoR C terminal sensor domain 72 229 2.9E-38 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 SMART SM00420 5 57 1.1E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 SUPERFAMILY SSF100950 72 229 4.92E-26 T 06-07-2017 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 SUPERFAMILY SSF46785 4 60 1.42E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 Gene3D G3DSA:1.10.10.10 1 54 2.7E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.4E-10 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.4E-10 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 Gene3D G3DSA:3.40.50.1360 74 212 2.9E-11 T 06-07-2017 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 SMART SM01134 70 231 1.1E-53 T 06-07-2017 LFZ55_RS01265 c9e503ce3356465f4324559b907f37e0 232 Pfam PF08220 DeoR-like helix-turn-helix domain 5 56 4.8E-17 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 Pfam PF07690 Major Facilitator Superfamily 20 187 1.0E-20 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 Pfam PF07690 Major Facilitator Superfamily 211 388 7.9E-12 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 41.963 T 06-07-2017 IPR022855 Multidrug resistance protein MdtH LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 SUPERFAMILY SSF103473 12 398 3.66E-53 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 Gene3D G3DSA:1.20.1250.20 207 388 2.4E-17 T 06-07-2017 LFZ55_RS14440 58fb8cfdb011aa7157d7130c554eec73 402 Gene3D G3DSA:1.20.1250.20 17 186 2.3E-26 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 Gene3D G3DSA:1.20.1250.20 272 447 1.9E-21 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 SUPERFAMILY SSF103473 251 449 5.23E-65 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 SUPERFAMILY SSF103473 9 198 5.23E-65 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 Gene3D G3DSA:1.20.1250.20 15 198 1.5E-27 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 Pfam PF07690 Major Facilitator Superfamily 22 412 2.9E-50 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.6E-9 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.6E-9 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.6E-9 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 3.6E-9 T 06-07-2017 LFZ55_RS10310 c380a9fd2ee7083cd7f8df1c242a3069 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.6E-9 T 06-07-2017 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 Gene3D G3DSA:1.10.10.10 1 81 3.6E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 SUPERFAMILY SSF46785 1 111 1.86E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 Gene3D G3DSA:3.40.190.10 93 173 3.4E-21 T 06-07-2017 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 Pfam PF03466 LysR substrate binding domain 89 266 1.1E-35 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 ProDom PD055259 TRANSCRIPTION TRANSCRIPTIONAL REGULATOR DNA-BINDING ACTIVATOR REGULATION YFAH FAMILY LYSR REGULATOR 225 290 8.0E-30 T 06-07-2017 IPR020093 Uncharacterised domain YfaH, C-terminal LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 SUPERFAMILY SSF53850 89 266 2.69E-35 T 06-07-2017 LFZ55_RS07835 3d8b89a9fac89e7fcf4c7871120f4665 292 Gene3D G3DSA:3.40.190.10 174 258 1.2E-20 T 06-07-2017 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.30.930.10 495 690 1.8E-67 T 06-07-2017 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Pfam PF01588 Putative tRNA binding domain 45 146 2.0E-28 T 06-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SUPERFAMILY SSF55681 467 690 1.54E-56 T 06-07-2017 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.2E-28 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SMART SM00874 403 471 1.2E-31 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SUPERFAMILY SSF56037 195 394 2.88E-78 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SMART SM00896 701 794 9.1E-46 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 49.509 T 06-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.30.56.20 402 475 2.8E-29 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 1.1E-20 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.50.40.10 197 392 3.3E-86 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Pfam PF03483 B3/4 domain 212 385 2.3E-71 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SUPERFAMILY SSF54991 696 794 3.4E-31 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:2.40.50.140 42 154 2.1E-46 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.30.70.380 703 794 1.5E-31 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SUPERFAMILY SSF50249 35 196 6.12E-52 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SUPERFAMILY SSF46955 403 475 4.67E-21 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 SMART SM00873 212 385 3.1E-99 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.30.56.10 1 38 5.1E-29 T 06-07-2017 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 Gene3D G3DSA:3.30.56.10 155 184 5.1E-29 T 06-07-2017 LFZ55_RS13490 aa580e2f54c7add6c7bc965e7d5ddbf4 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.1E-301 T 06-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 Pfam PF07729 FCD domain 125 246 6.2E-21 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 SUPERFAMILY SSF48008 120 252 4.45E-23 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 263 65.66 T 06-07-2017 IPR023730 Transcriptional regulator NanR LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 Gene3D G3DSA:1.20.120.530 119 256 2.1E-22 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 Gene3D G3DSA:1.10.10.10 29 103 2.3E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 SMART SM00895 123 247 4.1E-18 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 SMART SM00345 36 95 5.8E-23 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 1.2E-20 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS02510 b842d9f6b74d4826d955f1b3d2464e8f 263 SUPERFAMILY SSF46785 28 99 2.61E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 5.7E-14 T 06-07-2017 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 PIRSF PIRSF000370 1 223 2.4E-73 T 06-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 Gene3D G3DSA:3.20.20.70 29 164 6.3E-8 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 SUPERFAMILY SSF102114 24 119 2.09E-7 T 06-07-2017 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 Pfam PF04055 Radical SAM superfamily 27 181 1.2E-8 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.29 T 06-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 LFZ55_RS04680 3bc8fbc107a1fc291eae8b736544bb5f 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.4E-112 T 06-07-2017 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 SUPERFAMILY SSF51735 5 158 2.24E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 128 1.3E-30 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 SUPERFAMILY SSF55347 138 264 8.83E-21 T 06-07-2017 LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 Gene3D G3DSA:3.30.360.10 145 346 3.7E-43 T 06-07-2017 LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 Gene3D G3DSA:3.40.50.720 4 144 4.5E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11445 bf60632512c9eda2cf90fbb62f4fdffa 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 247 5.1E-11 T 06-07-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 Pfam PF07690 Major Facilitator Superfamily 15 405 2.3E-43 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 SUPERFAMILY SSF103473 244 457 4.84E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 SUPERFAMILY SSF103473 8 194 4.84E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.0E-8 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.0E-8 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.0E-8 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.0E-8 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.0E-8 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 49.099 T 06-07-2017 IPR023721 Multidrug resistance protein MdtD, putative LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 Gene3D G3DSA:1.20.1250.20 259 459 1.7E-13 T 06-07-2017 LFZ55_RS08605 808118f8163332ef79e7caca9a4e983e 470 Gene3D G3DSA:1.20.1250.20 10 193 7.9E-31 T 06-07-2017 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 4.9E-165 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 5.1E-16 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 PIRSF PIRSF000774 1 477 1.0E-152 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.5E-62 T 06-07-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 LFZ55_RS02620 8df070e6ea2fafa07ac5bcf5758050c5 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.0E-70 T 06-07-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding LFZ55_RS13625 ce9ebf0ab328c8de1997d7db552b475e 113 Pfam PF04355 SmpA / OmlA family 33 96 5.8E-11 T 06-07-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 Pfam PF03797 Autotransporter beta-domain 668 915 3.7E-40 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 134 166 1.7E-5 T 06-07-2017 IPR030930 Adhesin of bacterial autotransporter system LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 169 203 3.2E-11 T 06-07-2017 IPR030930 Adhesin of bacterial autotransporter system LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 332 367 5.4E-7 T 06-07-2017 IPR030930 Adhesin of bacterial autotransporter system LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 205 239 3.7E-7 T 06-07-2017 IPR030930 Adhesin of bacterial autotransporter system LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 240 265 3.3E-5 T 06-07-2017 IPR030930 Adhesin of bacterial autotransporter system LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 SUPERFAMILY SSF51126 55 367 8.16E-31 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 SUPERFAMILY SSF51126 402 569 8.16E-31 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 SMART SM00869 668 921 5.0E-37 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 PRINTS PR01484 Pertactin virulence factor family signature 709 733 2.1E-5 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 PRINTS PR01484 Pertactin virulence factor family signature 819 842 2.1E-5 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 PRINTS PR01484 Pertactin virulence factor family signature 912 932 2.1E-5 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 PRINTS PR01484 Pertactin virulence factor family signature 848 869 2.1E-5 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 466 932 7.1E-91 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 SUPERFAMILY SSF103515 636 932 4.58E-47 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 Gene3D G3DSA:2.40.128.130 637 932 8.1E-74 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 Gene3D G3DSA:2.160.20.20 66 581 3.0E-58 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS04285 ce3b4fbf79ca6b8d5ea9a5fb8fe34515 932 Pfam PF03212 Pertactin 443 562 1.4E-38 T 06-07-2017 IPR004899 Pertactin, central region LFZ55_RS08780 5732fb730c25e15fe3c24f7afcb05c40 378 Pfam PF13692 Glycosyl transferases group 1 215 336 1.5E-14 T 06-07-2017 LFZ55_RS08780 5732fb730c25e15fe3c24f7afcb05c40 378 SUPERFAMILY SSF53756 3 371 3.89E-15 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.0E-27 T 06-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.30.150.10 592 656 4.5E-32 T 06-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.359 T 06-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 06-07-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 SUPERFAMILY SSF64484 343 939 0.0 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 SUPERFAMILY SSF64484 11 226 0.0 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.40.50.100 715 792 7.2E-31 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 5.7E-160 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.40.270.10 793 820 3.9E-89 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.40.270.10 1060 1242 3.9E-89 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.2E-58 T 06-07-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:3.90.1110.10 153 230 2.9E-65 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:3.90.1110.10 346 444 2.9E-65 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 06-07-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-147 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-147 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-147 T 06-07-2017 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 06-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 06-07-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.40.50.150 828 937 2.1E-57 T 06-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.1E-57 T 06-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 2.5E-7 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22795 6514047df17e571355633a7061f309ca 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 5.2E-15 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.1E-8 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 2.1E-8 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.1E-8 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 Gene3D G3DSA:3.50.50.60 1 108 1.4E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 312 7.5E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.5E-12 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.5E-12 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.5E-12 T 06-07-2017 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 Gene3D G3DSA:3.50.50.60 164 323 6.7E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 SUPERFAMILY SSF51905 1 323 1.77E-30 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01290 23104347333a68a4707ad9061cb980b2 400 Gene3D G3DSA:3.40.50.720 109 163 7.7E-5 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07610 723540f62512ef8079308acfe5a8d1e2 404 Gene3D G3DSA:3.90.1150.10 280 403 5.5E-40 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS07610 723540f62512ef8079308acfe5a8d1e2 404 Pfam PF00155 Aminotransferase class I and II 35 394 4.1E-47 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS07610 723540f62512ef8079308acfe5a8d1e2 404 Gene3D G3DSA:3.40.640.10 51 279 1.7E-68 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS07610 723540f62512ef8079308acfe5a8d1e2 404 SUPERFAMILY SSF53383 7 401 1.48E-95 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 18 134 3.0E-24 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 615 743 1.4E-43 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 381 395 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 SUPERFAMILY SSF55904 610 754 4.84E-36 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Gene3D G3DSA:3.40.640.10 140 443 1.3E-106 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Gene3D G3DSA:3.90.1150.10 447 631 2.3E-68 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 PIRSF PIRSF009393 1 755 8.0E-271 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 SUPERFAMILY SSF53383 140 607 2.16E-106 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 140 590 6.6E-190 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS22115 299b3b92f89c7632296e16f1ce1a6720 755 Gene3D G3DSA:3.90.100.10 632 753 8.0E-31 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 SUPERFAMILY SSF55804 150 276 2.62E-11 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.7E-22 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.2E-24 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 139 3.1E-29 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 Gene3D G3DSA:3.40.930.10 5 141 3.6E-40 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 SUPERFAMILY SSF55804 2 140 4.32E-39 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 Gene3D G3DSA:3.40.930.10 150 277 4.6E-11 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.8E-18 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.8E-18 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.8E-18 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 06-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 Gene3D G3DSA:3.30.1340.10 287 374 2.0E-31 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LFZ55_RS08225 9619a13809976ba2485358851b4af67e 376 SUPERFAMILY SSF55594 287 375 3.4E-24 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS20745 b7a6f17eed0efd0889ea70f17c3e0894 256 Pfam PF03609 PTS system sorbose-specific iic component 2 232 7.8E-72 T 06-07-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LFZ55_RS11545 8230850f529cd045d77b05b9a93fe436 185 Pfam PF08534 Redoxin 69 179 8.7E-8 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 LFZ55_RS11545 8230850f529cd045d77b05b9a93fe436 185 SUPERFAMILY SSF52833 31 181 7.73E-17 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS11545 8230850f529cd045d77b05b9a93fe436 185 Gene3D G3DSA:3.40.30.10 31 180 5.5E-15 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS09775 9058659086a86ea7a3d36120b4cce071 185 SUPERFAMILY SSF52317 1 180 4.2E-43 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS09775 9058659086a86ea7a3d36120b4cce071 185 Pfam PF01965 DJ-1/PfpI family 2 164 6.2E-33 T 06-07-2017 IPR002818 DJ-1/PfpI LFZ55_RS09775 9058659086a86ea7a3d36120b4cce071 185 Gene3D G3DSA:3.40.50.880 1 174 8.1E-47 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 Gene3D G3DSA:3.20.20.120 120 367 1.2E-86 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 Gene3D G3DSA:3.30.390.10 1 119 6.4E-52 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 Pfam PF13378 Enolase C-terminal domain-like 192 379 4.1E-42 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 SUPERFAMILY SSF54826 1 112 5.45E-34 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 SUPERFAMILY SSF51604 98 387 1.7E-79 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 SMART SM00922 128 259 3.9E-16 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LFZ55_RS12660 940edfbe790c8cb0dc40d60f9ebe9d53 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 7.6E-35 T 06-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Gene3D G3DSA:3.40.190.10 3 110 9.3E-49 T 06-07-2017 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Gene3D G3DSA:3.30.160.40 221 305 5.3E-29 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.1E-112 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PIRSF PIRSF001438 1 311 3.4E-122 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 SUPERFAMILY SSF54782 220 308 1.83E-28 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 06-07-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 4.5E-24 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 SUPERFAMILY SSF53850 5 219 2.11E-86 T 06-07-2017 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.887 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 6.2E-78 T 06-07-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 Gene3D G3DSA:3.40.190.10 111 199 3.5E-40 T 06-07-2017 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 5.0E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 5.0E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 5.0E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 5.0E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS23730 6f303a03e5eba9b03bb9558e80d9710a 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 5.0E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 Pfam PF06969 HemN C-terminal domain 303 364 4.7E-9 T 06-07-2017 IPR010723 HemN, C-terminal LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 SMART SM00729 6 223 3.1E-53 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.7E-142 T 06-07-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 SUPERFAMILY SSF102114 5 376 1.16E-109 T 06-07-2017 LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 Pfam PF04055 Radical SAM superfamily 11 178 7.4E-19 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS03805 00d1c0bc6a009ec1f9eff735925d0545 378 Gene3D G3DSA:3.80.30.20 7 239 3.7E-28 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 Gene3D G3DSA:3.40.640.10 62 328 2.1E-92 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 Gene3D G3DSA:3.90.1150.10 332 423 1.1E-62 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 Gene3D G3DSA:3.90.1150.10 1 61 1.1E-62 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 Pfam PF00202 Aminotransferase class-III 26 421 6.6E-129 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 6.2E-183 T 06-07-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.847 T 06-07-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS16640 6234e32ca6ef5deeb12ec0acc124bf2c 429 SUPERFAMILY SSF53383 1 421 5.97E-136 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS09600 8c8bb3ddc6e7e905be76a46e500a0a67 421 Pfam PF04143 Sulphur transport 257 403 2.2E-22 T 06-07-2017 IPR007272 Sulphur transport domain LFZ55_RS09600 8c8bb3ddc6e7e905be76a46e500a0a67 421 Pfam PF04143 Sulphur transport 17 180 4.9E-26 T 06-07-2017 IPR007272 Sulphur transport domain LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 SUPERFAMILY SSF52540 281 378 1.52E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 SUPERFAMILY SSF52540 434 603 1.52E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Gene3D G3DSA:3.40.50.300 525 583 8.9E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Gene3D G3DSA:3.40.50.300 112 318 9.7E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Gene3D G3DSA:3.40.50.300 350 377 9.7E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 SUPERFAMILY SSF52540 6 360 1.13E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 SMART SM00382 163 320 0.0045 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Pfam PF13604 AAA domain 155 316 2.3E-31 T 06-07-2017 LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 602 53.922 T 06-07-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 1.3E-14 T 06-07-2017 IPR027785 UvrD-like helicase C-terminal domain LFZ55_RS04475 269d4cc3b301d6c8a173d3d844b508f9 611 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 1.7E-192 T 06-07-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LFZ55_RS10590 2df8e93087b6a15971c92ca2231ad90d 134 Gene3D G3DSA:3.40.30.10 19 101 2.0E-31 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS10590 2df8e93087b6a15971c92ca2231ad90d 134 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 116 2.4E-43 T 06-07-2017 IPR010893 [NiFe]-hydrogenase maturation factor HyaE LFZ55_RS10590 2df8e93087b6a15971c92ca2231ad90d 134 SUPERFAMILY SSF52833 6 127 6.52E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 6.0E-50 T 06-07-2017 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 Gene3D G3DSA:3.40.50.720 5 249 7.7E-69 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 7.7E-65 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 180 6.9E-4 T 06-07-2017 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.3E-7 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.3E-7 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.3E-7 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 SUPERFAMILY SSF51735 4 249 2.6E-67 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17575 65da5d4b1021259daa8bd153a28d6e5f 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 250 5.9E-106 T 06-07-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LFZ55_RS07305 2c6eff10e67fddf580891c0c03fe1f35 437 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 437 2.2E-154 T 06-07-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LFZ55_RS07305 2c6eff10e67fddf580891c0c03fe1f35 437 Gene3D G3DSA:2.40.160.60 28 437 1.0E-140 T 06-07-2017 LFZ55_RS07305 2c6eff10e67fddf580891c0c03fe1f35 437 SUPERFAMILY SSF56935 28 437 3.02E-110 T 06-07-2017 LFZ55_RS12665 f341ca76c85d0a1139d34592da404973 108 SUPERFAMILY SSF103481 7 106 3.14E-6 T 06-07-2017 LFZ55_RS12665 f341ca76c85d0a1139d34592da404973 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.812 T 06-07-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LFZ55_RS12665 f341ca76c85d0a1139d34592da404973 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.9E-46 T 06-07-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 SUPERFAMILY SSF102114 5 290 2.49E-69 T 06-07-2017 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 06-07-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 Pfam PF04055 Radical SAM superfamily 19 181 2.2E-27 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 8.8E-6 T 06-07-2017 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.0E-39 T 06-07-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 7.7E-108 T 06-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 37.829 T 06-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 SMART SM00729 14 226 1.1E-4 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS16595 895fd7521b46326139aa87f4f787796f 329 Gene3D G3DSA:3.20.20.70 3 306 2.5E-71 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 SUPERFAMILY SSF46689 244 292 8.51E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 SMART SM00342 208 290 1.8E-25 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 Pfam PF12833 Helix-turn-helix domain 215 291 1.5E-13 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 9.9E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 9.9E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS05075 7e6fd7e95509d8364ca27f3e28f48bfb 295 Gene3D G3DSA:1.10.10.60 244 291 1.0E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Gene3D G3DSA:2.20.25.90 51 115 9.9E-16 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Gene3D G3DSA:3.40.228.10 201 404 9.5E-81 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 812 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 SMART SM00926 53 112 6.0E-9 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Gene3D G3DSA:3.40.50.740 405 650 1.1E-76 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Gene3D G3DSA:3.40.50.740 116 200 1.1E-76 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Gene3D G3DSA:2.40.40.20 666 812 1.7E-56 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 SUPERFAMILY SSF53706 54 692 1.06E-169 T 06-07-2017 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 SUPERFAMILY SSF50692 637 812 3.84E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Pfam PF01568 Molydopterin dinucleotide binding domain 691 804 3.2E-27 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 727 754 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 112 3.2E-13 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12700 529b422a4bb43bf016b5705f96d942fc 812 Pfam PF00384 Molybdopterin oxidoreductase 115 569 3.6E-92 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 357 4.0E-194 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 4.2E-7 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 Gene3D G3DSA:4.10.480.10 227 310 5.8E-39 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 Gene3D G3DSA:3.40.50.700 49 226 4.0E-57 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 SUPERFAMILY SSF56770 46 310 1.02E-87 T 06-07-2017 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 2.0E-119 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 PIRSF PIRSF000310 5 357 2.4E-146 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.1E-27 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10610 affd830c4991bb55a951b0ae6185df20 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 9.2E-32 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 Gene3D G3DSA:3.10.105.10 290 505 1.6E-69 T 06-07-2017 LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 Gene3D G3DSA:3.90.76.10 39 219 1.5E-48 T 06-07-2017 LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 5.1E-106 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 PIRSF PIRSF002741 21 535 4.6E-120 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site LFZ55_RS01035 e7273a4cae57d573555863d6e87a33c6 535 SUPERFAMILY SSF53850 29 534 1.41E-162 T 06-07-2017 LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 Gene3D G3DSA:2.40.50.100 7 128 3.4E-52 T 06-07-2017 LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 SUPERFAMILY SSF51230 4 128 4.47E-46 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 8.4E-61 T 06-07-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.0E-50 T 06-07-2017 IPR002930 Glycine cleavage system H-protein LFZ55_RS04095 cc91e8454242b7196b74088fc37b05a4 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.38 T 06-07-2017 IPR002930 Glycine cleavage system H-protein LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 SUPERFAMILY SSF54211 167 251 7.84E-32 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 7.4E-83 T 06-07-2017 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.925 T 06-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 SUPERFAMILY SSF56784 1 158 7.74E-41 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 54.637 T 06-07-2017 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Gene3D G3DSA:3.30.230.40 172 253 3.7E-38 T 06-07-2017 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Gene3D G3DSA:3.30.230.40 258 355 3.6E-32 T 06-07-2017 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 3.7E-45 T 06-07-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Gene3D G3DSA:3.40.50.1000 1 171 4.1E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 SUPERFAMILY SSF54211 252 342 8.85E-33 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 06-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 06-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Pfam PF13242 HAD-hyrolase-like 103 145 7.8E-6 T 06-07-2017 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 9.5E-25 T 06-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 LFZ55_RS08875 ac04fefae24c5a1ec36969871f01919a 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 5.2E-65 T 06-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 PIRSF PIRSF002181 1 142 5.9E-51 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 Gene3D G3DSA:3.90.1180.10 3 141 3.4E-65 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 SUPERFAMILY SSF52161 1 140 1.83E-60 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 Pfam PF00572 Ribosomal protein L13 15 138 6.2E-57 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 06-07-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.6E-68 T 06-07-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02485 33e7dc7d11d7b539319895ea6c933e23 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.455 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 4.5E-125 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 Gene3D G3DSA:3.40.50.150 98 286 2.3E-41 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 SUPERFAMILY SSF53335 43 291 2.35E-44 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.569 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.1E-105 T 06-07-2017 LFZ55_RS02330 823355c1ff8703b85e336e84224cec81 293 PIRSF PIRSF000401 1 293 5.5E-94 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LFZ55_RS12605 df5e5127d097a4052c82e67ea1a7d0c3 130 Gene3D G3DSA:2.40.50.200 30 130 1.8E-29 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS12605 df5e5127d097a4052c82e67ea1a7d0c3 130 Pfam PF04076 Bacterial OB fold (BOF) protein 30 130 2.4E-38 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS12605 df5e5127d097a4052c82e67ea1a7d0c3 130 SUPERFAMILY SSF101756 30 130 9.42E-28 T 06-07-2017 IPR005220 Bacterial OB-fold LFZ55_RS12605 df5e5127d097a4052c82e67ea1a7d0c3 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 5.9E-53 T 06-07-2017 IPR016052 Bacteriophage 933W, L0136 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 285 6.4E-15 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 Pfam PF00698 Acyl transferase domain 5 273 5.3E-22 T 06-07-2017 IPR014043 Acyl transferase LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 283 3.7E-92 T 06-07-2017 IPR017554 Malonate decarboxylase, McdH subunit LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 SUPERFAMILY SSF55048 118 175 1.16E-10 T 06-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 Gene3D G3DSA:3.30.70.250 119 180 4.1E-14 T 06-07-2017 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 Gene3D G3DSA:3.40.366.10 2 111 2.2E-43 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 Gene3D G3DSA:3.40.366.10 181 276 2.2E-43 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 SUPERFAMILY SSF52151 182 278 9.94E-47 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS01920 5c571ca58ba2b3034f6b69a576e0ff38 298 SUPERFAMILY SSF52151 2 117 9.94E-47 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82866 809 1033 3.01E-44 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82693 567 671 6.28E-33 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82693 38 132 1.2E-27 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.0E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82714 182 271 3.53E-21 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82866 296 497 1.96E-49 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82714 725 812 2.09E-22 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-36 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:3.30.2090.10 181 275 4.5E-25 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:3.30.2090.10 724 812 1.0E-27 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:3.30.70.1430 569 671 6.8E-41 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 06-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:1.10.3850.10 278 498 1.4E-60 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 Gene3D G3DSA:1.10.3850.10 817 1031 2.8E-56 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82693 135 182 4.19E-28 T 06-07-2017 LFZ55_RS18085 c0ee6f2bbe3756e62f409c488ce39000 1049 SUPERFAMILY SSF82693 274 330 4.19E-28 T 06-07-2017 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 Hamap MF_01912 Sulfofructosephosphate aldolase. 1 291 60.69 T 06-07-2017 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 Gene3D G3DSA:3.20.20.70 3 289 4.7E-98 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 PIRSF PIRSF037840 1 291 1.1E-134 T 06-07-2017 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 SMART SM01133 16 258 9.3E-18 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 Pfam PF01791 DeoC/LacD family aldolase 17 257 5.6E-64 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS23360 5188616789332a3e782c608d208474cc 292 SUPERFAMILY SSF51569 4 288 2.93E-65 T 06-07-2017 LFZ55_RS09045 3dd9a0feb27931da89f1aa1126960625 554 Gene3D G3DSA:3.20.20.350 1 553 0.0 T 06-07-2017 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 LFZ55_RS09045 3dd9a0feb27931da89f1aa1126960625 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 06-07-2017 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 LFZ55_RS09045 3dd9a0feb27931da89f1aa1126960625 554 PIRSF PIRSF018507 1 554 0.0 T 06-07-2017 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 LFZ55_RS09045 3dd9a0feb27931da89f1aa1126960625 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 06-07-2017 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 LFZ55_RS09045 3dd9a0feb27931da89f1aa1126960625 554 SUPERFAMILY SSF51703 1 553 3.41E-292 T 06-07-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS05840 13207138636f7443c19f95cfdf41b160 245 Pfam PF13525 Outer membrane lipoprotein 28 236 2.1E-84 T 06-07-2017 LFZ55_RS05840 13207138636f7443c19f95cfdf41b160 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 244 7.6E-89 T 06-07-2017 IPR017689 Outer membrane protein assembly factor BamD LFZ55_RS05840 13207138636f7443c19f95cfdf41b160 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.458 T 06-07-2017 IPR017689 Outer membrane protein assembly factor BamD LFZ55_RS05840 13207138636f7443c19f95cfdf41b160 245 Gene3D G3DSA:1.25.40.10 34 190 4.6E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS05840 13207138636f7443c19f95cfdf41b160 245 SUPERFAMILY SSF48452 27 121 4.75E-9 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS16925 4cefea8d5396fdc05ec87670bdfb2394 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.7E-37 T 06-07-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 LFZ55_RS16925 4cefea8d5396fdc05ec87670bdfb2394 116 PIRSF PIRSF000169 1 115 1.3E-42 T 06-07-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 LFZ55_RS16925 4cefea8d5396fdc05ec87670bdfb2394 116 SUPERFAMILY SSF81343 5 115 5.67E-31 T 06-07-2017 LFZ55_RS16925 4cefea8d5396fdc05ec87670bdfb2394 116 Gene3D G3DSA:1.20.1300.10 1 115 2.4E-40 T 06-07-2017 LFZ55_RS16925 4cefea8d5396fdc05ec87670bdfb2394 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 1.0E-7 T 06-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS20215 5a00195e4c9e28a0ee8f7741f3ac58d6 180 Pfam PF00419 Fimbrial protein 35 179 2.9E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS20215 5a00195e4c9e28a0ee8f7741f3ac58d6 180 SUPERFAMILY SSF49401 33 179 6.46E-36 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS20215 5a00195e4c9e28a0ee8f7741f3ac58d6 180 Gene3D G3DSA:2.60.40.1090 32 179 8.3E-42 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 5.6E-148 T 06-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.9E-29 T 06-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 Gene3D G3DSA:3.40.47.10 161 316 3.7E-53 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 8.6E-37 T 06-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 SUPERFAMILY SSF53901 3 317 3.76E-70 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.714 T 06-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LFZ55_RS14300 761e5bda599d6f0b26dd23a375e87f57 317 Gene3D G3DSA:3.40.47.10 1 160 4.6E-64 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 SUPERFAMILY SSF53271 252 485 5.24E-72 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 SUPERFAMILY SSF56235 2 259 9.44E-75 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 Pfam PF00156 Phosphoribosyl transferase domain 285 394 1.1E-7 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 6.8E-164 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.248 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.4E-16 T 06-07-2017 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 Gene3D G3DSA:3.40.50.2020 280 446 3.4E-47 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 PIRSF PIRSF000485 1 483 3.8E-174 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LFZ55_RS07445 4ea33ddf5af2cae5e4ca80ca1e4e0019 505 Gene3D G3DSA:3.60.20.10 2 260 1.5E-64 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS11890 da205f369901769f687f200108c06ec5 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 141 3.8E-25 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS11890 da205f369901769f687f200108c06ec5 145 SUPERFAMILY SSF55804 3 142 3.27E-28 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS11890 da205f369901769f687f200108c06ec5 145 Gene3D G3DSA:3.40.930.10 7 141 6.4E-36 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.8E-11 T 06-07-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SUPERFAMILY SSF47781 403 583 6.3E-61 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.0E-35 T 06-07-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00532 3 448 2.4E-290 T 06-07-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF14520 Helix-hairpin-helix domain 446 501 1.2E-4 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:2.40.50.140 319 391 9.2E-35 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 8.2E-140 T 06-07-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SUPERFAMILY SSF52113 596 669 5.07E-19 T 06-07-2017 IPR001357 BRCT domain LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 06-07-2017 IPR018239 NAD-dependent DNA ligase, active site LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.4E-22 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00292 595 670 1.0E-13 T 06-07-2017 IPR001357 BRCT domain LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:3.40.50.10190 594 669 4.4E-26 T 06-07-2017 IPR001357 BRCT domain LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:3.30.470.30 119 252 1.2E-50 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:1.10.287.610 2 67 1.0E-28 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00278 480 499 8.1 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00278 446 465 22.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00278 512 531 600.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SMART SM00278 544 563 37.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.105 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 06-07-2017 IPR033136 NAD-dependent DNA ligase, conserved site LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 4.1E-274 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 PIRSF PIRSF001604 1 670 7.5E-252 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 2.7E-13 T 06-07-2017 IPR001357 BRCT domain LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SUPERFAMILY SSF56091 2 316 4.64E-122 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 SUPERFAMILY SSF50249 318 400 1.01E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:1.10.150.20 504 584 4.9E-31 T 06-07-2017 LFZ55_RS07095 3c5d8c7f8251dad05a3873bfdaaa9ee4 671 Gene3D G3DSA:1.10.150.20 435 502 3.2E-27 T 06-07-2017 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 29 657 8.1E-134 T 06-07-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 Gene3D G3DSA:2.40.170.20 148 656 1.2E-72 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 Gene3D G3DSA:2.170.130.10 29 147 9.2E-30 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 Pfam PF00593 TonB dependent receptor 409 656 6.2E-25 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 146 1.7E-18 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 29 657 1.1E-107 T 06-07-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 LFZ55_RS08065 0d974411fc014db2b086bcfa1d249b8b 657 SUPERFAMILY SSF56935 29 657 3.66E-91 T 06-07-2017 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 4.3E-264 T 06-07-2017 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 2.7E-9 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 SUPERFAMILY SSF51905 10 322 9.87E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 Pfam PF01266 FAD dependent oxidoreductase 10 358 3.3E-50 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.1E-23 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS07820 580b14b01cd2a97e7e9fa43131ee6e25 542 Gene3D G3DSA:3.50.50.60 9 241 6.5E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 Gene3D G3DSA:2.60.120.10 32 90 8.2E-7 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 SUPERFAMILY SSF51182 16 182 1.36E-10 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 Gene3D G3DSA:1.10.10.60 154 211 8.3E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 Pfam PF12833 Helix-turn-helix domain 179 255 1.3E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 SMART SM00342 172 255 1.5E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 Gene3D G3DSA:1.10.10.60 213 254 1.9E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 SUPERFAMILY SSF46689 211 255 8.51E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS13815 c4ea2a805b1247de2e658ca5f8e1b50b 264 Pfam PF02311 AraC-like ligand binding domain 21 88 6.6E-6 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 SUPERFAMILY SSF160467 5 92 6.93E-10 T 06-07-2017 LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 7.3E-100 T 06-07-2017 IPR010016 KipI family LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 SMART SM00796 4 202 6.7E-99 T 06-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 8.0E-71 T 06-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 Gene3D G3DSA:3.30.1360.40 5 79 1.6E-9 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 SUPERFAMILY SSF50891 88 214 3.03E-47 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS17035 315c78a8f755815b3a7a320cbfe3e62e 218 Gene3D G3DSA:2.40.100.10 88 212 1.3E-53 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 06-07-2017 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 Pfam PF00326 Prolyl oligopeptidase family 463 675 9.3E-66 T 06-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 403 3.5E-111 T 06-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 SUPERFAMILY SSF53474 414 655 4.69E-44 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 9.1E-54 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 Gene3D G3DSA:3.40.50.1820 416 647 4.5E-36 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 Gene3D G3DSA:2.130.10.120 73 407 6.3E-97 T 06-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LFZ55_RS10045 e9425b20b6a99ee7b7637d7dc6f3cf9e 683 SUPERFAMILY SSF50993 2 408 2.28E-81 T 06-07-2017 LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 32 143 3.8E-27 T 06-07-2017 LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 06-07-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 06-07-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 06-07-2017 IPR021131 Ribosomal protein L18e/L15P LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-32 T 06-07-2017 IPR021131 Ribosomal protein L18e/L15P LFZ55_RS02135 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 06-07-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 LFZ55_RS03965 2ccd09f2f5e37488eeb5c1fa4de0903f 141 SUPERFAMILY SSF117856 8 139 3.14E-34 T 06-07-2017 LFZ55_RS03965 2ccd09f2f5e37488eeb5c1fa4de0903f 141 Pfam PF03479 Domain of unknown function (DUF296) 13 118 7.3E-21 T 06-07-2017 IPR005175 PPC domain LFZ55_RS03965 2ccd09f2f5e37488eeb5c1fa4de0903f 141 Gene3D G3DSA:3.30.1330.80 12 140 1.2E-46 T 06-07-2017 LFZ55_RS16785 aa220ba51cacf59cb6547bf5826405e8 350 Gene3D G3DSA:3.20.20.70 9 349 2.6E-162 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS16785 aa220ba51cacf59cb6547bf5826405e8 350 SUPERFAMILY SSF51569 7 348 6.59E-141 T 06-07-2017 LFZ55_RS16785 aa220ba51cacf59cb6547bf5826405e8 350 Pfam PF00793 DAHP synthetase I family 38 338 1.2E-111 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS16785 aa220ba51cacf59cb6547bf5826405e8 350 PIRSF PIRSF001361 1 350 3.7E-166 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS16785 aa220ba51cacf59cb6547bf5826405e8 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.3E-181 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS00140 3f1f0aa605f8893020d21128cbee019a 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.68 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS00140 3f1f0aa605f8893020d21128cbee019a 159 Pfam PF03100 CcmE 4 137 1.2E-43 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS00140 3f1f0aa605f8893020d21128cbee019a 159 Gene3D G3DSA:2.40.50.140 26 131 1.8E-40 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00140 3f1f0aa605f8893020d21128cbee019a 159 SUPERFAMILY SSF82093 30 143 9.55E-40 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS05670 9756ae6ea77661b05042770ccb3cae5e 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 7 245 1.0E-81 T 06-07-2017 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 9.3E-176 T 06-07-2017 IPR017932 Glutamine amidotransferase type 2 domain LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.0E-105 T 06-07-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Gene3D G3DSA:2.160.20.60 1211 1465 1.0E-95 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Gene3D G3DSA:3.20.20.70 810 1194 7.0E-165 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 SUPERFAMILY SSF51395 434 1190 6.11E-250 T 06-07-2017 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 SUPERFAMILY SSF56235 12 429 9.12E-150 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Pfam PF01493 GXGXG motif 1236 1419 1.0E-74 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Gene3D G3DSA:3.20.20.70 437 776 5.7E-102 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 4.7E-158 T 06-07-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 Gene3D G3DSA:3.60.20.10 12 433 8.5E-171 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS02560 fa1dfe4d7642d6f87190d7f7948b523a 1486 SUPERFAMILY SSF69336 1211 1465 4.32E-87 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS06045 17df15b317c1ac9b20cd6c8f660ef51c 183 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 48.779 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 LFZ55_RS06045 17df15b317c1ac9b20cd6c8f660ef51c 183 Pfam PF14437 MafB19-like deaminase 18 164 6.3E-33 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 LFZ55_RS06045 17df15b317c1ac9b20cd6c8f660ef51c 183 SUPERFAMILY SSF53927 17 168 3.01E-59 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS06045 17df15b317c1ac9b20cd6c8f660ef51c 183 Gene3D G3DSA:3.40.140.10 16 162 7.0E-61 T 06-07-2017 LFZ55_RS06045 17df15b317c1ac9b20cd6c8f660ef51c 183 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 4.9E-22 T 06-07-2017 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Gene3D G3DSA:3.60.20.10 2 238 1.8E-79 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 4.8E-270 T 06-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.47 T 06-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Pfam PF01380 SIS domain 462 591 1.5E-30 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Pfam PF01380 SIS domain 289 418 2.0E-33 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 SUPERFAMILY SSF53697 245 609 1.21E-114 T 06-07-2017 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 SUPERFAMILY SSF56235 2 232 8.58E-75 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Gene3D G3DSA:3.40.50.10490 445 609 3.0E-70 T 06-07-2017 LFZ55_RS24105 212a3ae2304bb0f82acb20e257d68566 609 Gene3D G3DSA:3.40.50.10490 245 444 9.2E-66 T 06-07-2017 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 Pfam PF04055 Radical SAM superfamily 82 227 3.4E-8 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 368 2.1E-163 T 06-07-2017 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 SMART SM00876 258 361 1.9E-27 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 SUPERFAMILY SSF102114 36 363 1.05E-53 T 06-07-2017 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 1.5E-21 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS22785 7c09e60e90855d7d02acf51ae6ed15af 381 Gene3D G3DSA:3.20.20.70 36 361 1.7E-46 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 SUPERFAMILY SSF47616 83 199 4.32E-28 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 2.3E-8 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 Gene3D G3DSA:1.20.1050.10 90 188 1.7E-38 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 7.0E-14 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 Gene3D G3DSA:3.40.30.10 1 89 1.8E-25 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS12960 f082dcd7cf9cce05e1016337bbcad6f0 201 SUPERFAMILY SSF52833 1 79 1.1E-17 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS21935 6cde144b9ec7f350575eaddef636096b 68 Gene3D G3DSA:1.10.10.10 4 67 6.5E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21935 6cde144b9ec7f350575eaddef636096b 68 SUPERFAMILY SSF46785 24 67 2.79E-8 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21935 6cde144b9ec7f350575eaddef636096b 68 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 5 67 6.0E-11 T 06-07-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 LFZ55_RS21935 6cde144b9ec7f350575eaddef636096b 68 Pfam PF04703 FaeA-like protein 5 68 7.6E-16 T 06-07-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 4.2E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 SUPERFAMILY SSF53850 99 298 3.04E-30 T 06-07-2017 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 Gene3D G3DSA:3.40.190.10 198 267 1.4E-8 T 06-07-2017 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 Pfam PF03466 LysR substrate binding domain 99 296 3.4E-31 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 Gene3D G3DSA:1.10.10.10 8 91 3.7E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 Gene3D G3DSA:3.40.190.10 99 197 9.5E-21 T 06-07-2017 LFZ55_RS02990 af00aa55265a2edfa200745de713b1a9 312 SUPERFAMILY SSF46785 7 116 2.08E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 SUPERFAMILY SSF81891 198 436 1.05E-50 T 06-07-2017 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Gene3D G3DSA:3.30.460.10 51 199 1.1E-51 T 06-07-2017 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Gene3D G3DSA:1.10.3090.10 200 435 4.0E-52 T 06-07-2017 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 SUPERFAMILY SSF81301 41 196 1.01E-40 T 06-07-2017 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 288 5.3E-20 T 06-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 467 2.7E-159 T 06-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 464 1.4E-41 T 06-07-2017 IPR025866 Polymerase A arginine-rich C-terminal domain LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 463 39.333 T 06-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LFZ55_RS19445 c6deac24cbf44945158e83f0b449d535 472 Pfam PF01743 Poly A polymerase head domain 69 200 6.5E-40 T 06-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 LFZ55_RS01305 6c20c1c54412186963f251e31036f81c 144 SUPERFAMILY SSF52402 3 139 1.42E-32 T 06-07-2017 LFZ55_RS01305 6c20c1c54412186963f251e31036f81c 144 Pfam PF00582 Universal stress protein family 3 138 2.5E-21 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS01305 6c20c1c54412186963f251e31036f81c 144 PIRSF PIRSF006276 1 141 3.1E-54 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS01305 6c20c1c54412186963f251e31036f81c 144 Gene3D G3DSA:3.40.50.620 3 139 7.0E-32 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20170 dbb845231eb679803f18022ce95301c3 149 SMART SM00862 25 102 2.2E-6 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS20170 dbb845231eb679803f18022ce95301c3 149 SUPERFAMILY SSF46894 9 101 7.09E-8 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20170 dbb845231eb679803f18022ce95301c3 149 Gene3D G3DSA:1.10.10.10 23 101 3.0E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20170 dbb845231eb679803f18022ce95301c3 149 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 99 3.0E-7 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 06-07-2017 IPR018080 Band 7/stomatin-like, conserved site LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 SMART SM00244 18 176 6.6E-60 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 Pfam PF01145 SPFH domain / Band 7 family 22 203 1.7E-33 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 PRINTS PR00721 Stomatin signature 73 94 2.5E-27 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 PRINTS PR00721 Stomatin signature 128 151 2.5E-27 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 PRINTS PR00721 Stomatin signature 108 125 2.5E-27 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 PRINTS PR00721 Stomatin signature 171 192 2.5E-27 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 PRINTS PR00721 Stomatin signature 152 170 2.5E-27 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS17940 9a86b1163d8c57216946b5c6d3fb9f4e 305 SUPERFAMILY SSF117892 49 183 3.27E-41 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS17935 f3ff28818824f21c8dea4f79cb11f14a 225 SMART SM00382 32 214 6.5E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17935 f3ff28818824f21c8dea4f79cb11f14a 225 Pfam PF00005 ABC transporter 23 166 5.3E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS17935 f3ff28818824f21c8dea4f79cb11f14a 225 SUPERFAMILY SSF52540 6 212 1.85E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17935 f3ff28818824f21c8dea4f79cb11f14a 225 Gene3D G3DSA:3.40.50.300 9 219 4.0E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17935 f3ff28818824f21c8dea4f79cb11f14a 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS20240 338ed2594b73efac67aa90eb8a5a7f10 177 Gene3D G3DSA:1.20.141.10 3 176 1.8E-45 T 06-07-2017 LFZ55_RS20240 338ed2594b73efac67aa90eb8a5a7f10 177 SUPERFAMILY SSF53955 2 176 2.19E-43 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS20240 338ed2594b73efac67aa90eb8a5a7f10 177 Pfam PF09374 Predicted Peptidoglycan domain 91 176 2.6E-30 T 06-07-2017 IPR018537 Peptidoglycan binding domain LFZ55_RS20240 338ed2594b73efac67aa90eb8a5a7f10 177 Pfam PF05838 Glycosyl hydrolase 108 7 88 1.2E-22 T 06-07-2017 IPR008565 Protein of unknown function DUF847 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 SUPERFAMILY SSF53335 396 698 7.38E-71 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Pfam PF02926 THUMP domain 20 153 1.2E-20 T 06-07-2017 IPR004114 THUMP domain GO:0003723 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 4.0E-21 T 06-07-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 06-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.773 T 06-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Gene3D G3DSA:3.40.50.150 432 700 1.1E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 SUPERFAMILY SSF53335 258 373 2.49E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 SUPERFAMILY SSF53335 148 217 2.49E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 3.0E-5 T 06-07-2017 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 3.0E-5 T 06-07-2017 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Gene3D G3DSA:3.40.50.150 148 214 6.9E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Gene3D G3DSA:3.40.50.150 255 333 6.9E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 PIRSF PIRSF037618 1 702 7.7E-296 T 06-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 4.8E-64 T 06-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS15595 c2139cdd60d2064ca0437f73c4d46e9a 702 SMART SM00981 56 154 1.1E-19 T 06-07-2017 IPR004114 THUMP domain GO:0003723 LFZ55_RS05690 d45715c1d9978ca444d2d137ed5af819 913 Gene3D G3DSA:3.40.50.300 256 408 7.8E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05690 d45715c1d9978ca444d2d137ed5af819 913 Pfam PF04471 Restriction endonuclease 24 117 4.0E-8 T 06-07-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 LFZ55_RS05690 d45715c1d9978ca444d2d137ed5af819 913 Gene3D G3DSA:3.40.1350.10 21 117 1.6E-11 T 06-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 LFZ55_RS05690 d45715c1d9978ca444d2d137ed5af819 913 SUPERFAMILY SSF52980 24 119 9.38E-12 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS05690 d45715c1d9978ca444d2d137ed5af819 913 SUPERFAMILY SSF52540 255 512 1.04E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 Pfam PF00797 N-acetyltransferase 21 255 3.6E-83 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 SUPERFAMILY SSF54001 2 269 1.59E-85 T 06-07-2017 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 Gene3D G3DSA:3.30.2140.10 2 85 6.0E-49 T 06-07-2017 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 Gene3D G3DSA:3.30.2140.10 182 263 6.0E-49 T 06-07-2017 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 4.4E-12 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 4.4E-12 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 4.4E-12 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 151 170 4.4E-12 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS12105 0eba44532f4cd202ea4fe0b2d435d9ca 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 4.4E-12 T 06-07-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 2.6E-38 T 06-07-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 PIRSF PIRSF000103 1 295 5.0E-95 T 06-07-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 SUPERFAMILY SSF48179 164 293 1.09E-37 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 06-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 SUPERFAMILY SSF51735 2 164 8.87E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 Gene3D G3DSA:1.10.1040.10 166 294 3.0E-44 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 6.8E-152 T 06-07-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 Gene3D G3DSA:3.40.50.720 1 164 4.0E-61 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.2E-49 T 06-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LFZ55_RS02935 90136c9e7fa46b5729cf94afcaffddc3 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 60.082 T 06-07-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.6E-24 T 06-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 Gene3D G3DSA:3.40.190.10 3 139 3.6E-54 T 06-07-2017 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 6.4E-33 T 06-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 06-07-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 Gene3D G3DSA:3.30.70.120 226 299 3.6E-31 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.1E-48 T 06-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 SUPERFAMILY SSF53850 6 224 1.28E-70 T 06-07-2017 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.6E-58 T 06-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.148 T 06-07-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 LFZ55_RS08890 a4bf6878555595b275057caea6f64f65 299 SUPERFAMILY SSF54913 226 298 1.11E-21 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Gene3D G3DSA:1.20.5.480 247 294 5.1E-25 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 4.5E-19 T 06-07-2017 IPR015246 Formate dehydrogenase, transmembrane LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.3E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 5.9E-144 T 06-07-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 PIRSF PIRSF036298 1 294 1.2E-160 T 06-07-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 SUPERFAMILY SSF81597 246 290 1.15E-13 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Gene3D G3DSA:3.30.70.20 138 172 1.4E-15 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 SUPERFAMILY SSF54862 26 258 1.47E-70 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Gene3D G3DSA:3.30.70.20 173 227 2.4E-36 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Gene3D G3DSA:3.30.70.20 30 103 2.4E-36 T 06-07-2017 LFZ55_RS12160 0d5956bb0db7eb217a167908530091b4 294 Gene3D G3DSA:3.30.70.20 104 137 1.5E-11 T 06-07-2017 LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 SUPERFAMILY SSF51306 15 136 4.01E-35 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 Gene3D G3DSA:2.10.109.10 26 136 1.1E-45 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 92 104 5.4E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 53 63 5.4E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 64 75 5.4E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS24300 f3a67aa508abccfb398ee1bbd16f08c2 139 Pfam PF00717 Peptidase S24-like 58 121 8.7E-11 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B LFZ55_RS01540 87fa31f6fb68b3cb782ddbaee28bef6d 177 Gene3D G3DSA:3.40.50.300 4 172 8.5E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01540 87fa31f6fb68b3cb782ddbaee28bef6d 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 172 1.4E-71 T 06-07-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 LFZ55_RS01540 87fa31f6fb68b3cb782ddbaee28bef6d 177 Pfam PF01202 Shikimate kinase 17 170 2.4E-11 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS01540 87fa31f6fb68b3cb782ddbaee28bef6d 177 SUPERFAMILY SSF52540 4 172 4.63E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18170 25f5e8967a99a2f78128193f69c2e76b 351 Gene3D G3DSA:3.40.50.1100 142 332 1.6E-40 T 06-07-2017 LFZ55_RS18170 25f5e8967a99a2f78128193f69c2e76b 351 SUPERFAMILY SSF53686 9 332 3.8E-70 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS18170 25f5e8967a99a2f78128193f69c2e76b 351 Gene3D G3DSA:3.40.50.1100 47 141 5.3E-23 T 06-07-2017 LFZ55_RS18170 25f5e8967a99a2f78128193f69c2e76b 351 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 8.9E-42 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Gene3D G3DSA:3.40.1190.10 94 299 5.2E-67 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Gene3D G3DSA:3.90.190.20 301 433 1.5E-42 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.528 T 06-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 SUPERFAMILY SSF53623 95 297 6.41E-56 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 1.2E-127 T 06-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Pfam PF08245 Mur ligase middle domain 110 280 2.5E-26 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 SUPERFAMILY SSF51984 3 94 1.7E-23 T 06-07-2017 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 SUPERFAMILY SSF53244 299 437 4.26E-52 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Gene3D G3DSA:3.40.50.720 3 92 3.5E-26 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19745 9ab2f35f30b1508e5b5a5899d360fd45 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 369 7.1E-8 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 Gene3D G3DSA:3.10.580.10 176 303 1.8E-10 T 06-07-2017 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 Gene3D G3DSA:3.30.465.10 304 404 6.0E-25 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 Pfam PF03471 Transporter associated domain 329 403 4.0E-19 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 Pfam PF00571 CBS domain 263 311 6.8E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 SUPERFAMILY SSF54631 177 314 1.89E-21 T 06-07-2017 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 SUPERFAMILY SSF56176 325 407 1.91E-21 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 Pfam PF01595 Domain of unknown function DUF21 2 169 9.7E-49 T 06-07-2017 IPR002550 Domain of unknown function DUF21 LFZ55_RS05765 0640ea4a05eb57e89a5bb34a26a21243 413 SMART SM01091 327 405 2.1E-25 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS12720 c41594610f19e181d95db15c3256b8c5 204 SUPERFAMILY SSF89155 3 197 1.83E-59 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS12720 c41594610f19e181d95db15c3256b8c5 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 43.374 T 06-07-2017 IPR028611 Tat proofreading chaperone DmsD GO:0005048 LFZ55_RS12720 c41594610f19e181d95db15c3256b8c5 204 Pfam PF02613 Nitrate reductase delta subunit 46 163 1.4E-23 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS12720 c41594610f19e181d95db15c3256b8c5 204 Gene3D G3DSA:1.10.3480.10 6 203 3.8E-62 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS12720 c41594610f19e181d95db15c3256b8c5 204 PIRSF PIRSF004690 2 203 3.0E-64 T 06-07-2017 IPR026269 Tat proofreading chaperone DmsD-type LFZ55_RS12575 bf1ace4ade268541606434e706a027f5 71 Pfam PF13999 MarB protein 7 69 1.0E-28 T 06-07-2017 IPR025732 MarB protein LFZ55_RS12575 bf1ace4ade268541606434e706a027f5 71 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 1 71 5.0E-9 T 06-07-2017 IPR025732 MarB protein LFZ55_RS12195 2ff79f5931c5ef36ac487dce745aa4b0 143 Gene3D G3DSA:3.30.300.20 3 141 3.0E-54 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS12195 2ff79f5931c5ef36ac487dce745aa4b0 143 SUPERFAMILY SSF82784 1 141 2.09E-41 T 06-07-2017 IPR003718 OsmC/Ohr family LFZ55_RS12195 2ff79f5931c5ef36ac487dce745aa4b0 143 Pfam PF02566 OsmC-like protein 43 138 9.5E-19 T 06-07-2017 IPR003718 OsmC/Ohr family LFZ55_RS12195 2ff79f5931c5ef36ac487dce745aa4b0 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 6.9E-61 T 06-07-2017 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 LFZ55_RS09995 d106640bc3e296771e93acb556ba7ef7 84 SUPERFAMILY SSF48295 5 37 2.2E-5 T 06-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LFZ55_RS01270 c7279f8d7e559e2cf7f815ba0557048d 142 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 141 8.6E-35 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS01270 c7279f8d7e559e2cf7f815ba0557048d 142 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS01270 c7279f8d7e559e2cf7f815ba0557048d 142 SUPERFAMILY SSF55804 3 141 2.75E-40 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS01270 c7279f8d7e559e2cf7f815ba0557048d 142 Gene3D G3DSA:3.40.930.10 2 141 6.3E-41 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 Pfam PF00005 ABC transporter 276 429 8.4E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 Pfam PF00005 ABC transporter 23 163 8.1E-19 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 Gene3D G3DSA:3.40.50.300 253 467 2.0E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 SUPERFAMILY SSF52540 253 473 9.2E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 SUPERFAMILY SSF52540 4 226 3.53E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 Gene3D G3DSA:3.40.50.300 6 227 7.6E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 SMART SM00382 28 244 2.4E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16725 9eda692d7889731784cb1c1a89a88d26 490 SMART SM00382 285 479 7.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.9E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.9E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 Gene3D G3DSA:3.40.1410.10 94 230 4.7E-47 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 Pfam PF07702 UTRA domain 98 234 2.5E-33 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 SMART SM00866 97 234 3.1E-30 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 SMART SM00345 17 76 9.7E-21 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 12 239 6.5E-100 T 06-07-2017 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 SUPERFAMILY SSF64288 64 237 1.04E-40 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 Gene3D G3DSA:1.10.10.10 8 83 3.4E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.1E-21 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS16660 46e1888013d361ef2bf5d50f13eb58e7 241 SUPERFAMILY SSF46785 7 100 1.62E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 Gene3D G3DSA:3.40.50.720 225 301 7.5E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 SUPERFAMILY SSF51735 188 350 2.25E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 SUPERFAMILY SSF52283 350 397 3.66E-48 T 06-07-2017 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 SUPERFAMILY SSF52283 4 187 3.66E-48 T 06-07-2017 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 188 348 2.0E-39 T 06-07-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 Gene3D G3DSA:3.40.50.1480 3 224 4.7E-66 T 06-07-2017 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 138 2.8E-22 T 06-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 PIRSF PIRSF001109 1 399 4.3E-113 T 06-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 SMART SM00996 6 400 7.9E-55 T 06-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 LFZ55_RS12285 0bd9f8c0620be99100b33687b7fc8b17 402 SMART SM00997 188 349 1.9E-70 T 06-07-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 4.6E-61 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 8.0E-4 T 06-07-2017 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 1.8E-17 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.4E-52 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.4E-52 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.4E-52 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.4E-52 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.4E-52 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.934 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 Gene3D G3DSA:3.40.50.620 1 157 4.5E-57 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 Pfam PF01467 Cytidylyltransferase-like 6 134 6.1E-22 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS00615 ea9e43d80977cd333aa962878ff05aed 159 SUPERFAMILY SSF52374 3 156 1.42E-46 T 06-07-2017 LFZ55_RS13865 4b1207bb313d3f3c26df3d0612d17dd9 120 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 3.1E-23 T 06-07-2017 IPR015392 Domain of unknown function DUF1971 LFZ55_RS13865 4b1207bb313d3f3c26df3d0612d17dd9 120 SUPERFAMILY SSF51197 1 106 1.04E-33 T 06-07-2017 LFZ55_RS13865 4b1207bb313d3f3c26df3d0612d17dd9 120 Gene3D G3DSA:2.60.120.10 1 117 1.7E-43 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS13865 4b1207bb313d3f3c26df3d0612d17dd9 120 PIRSF PIRSF020632 1 120 4.1E-50 T 06-07-2017 IPR014510 Tellurite resistance predicted, YeaR LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 Gene3D G3DSA:2.60.120.10 122 197 1.6E-17 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 Pfam PF07883 Cupin domain 126 193 1.1E-13 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 SUPERFAMILY SSF51182 103 195 9.5E-17 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 Pfam PF12844 Helix-turn-helix domain 24 84 1.2E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 Gene3D G3DSA:1.10.260.40 22 121 1.8E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 SMART SM00530 25 80 3.0E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS11560 e53adf91c9b2ce39d230d3ec8f91c555 200 SUPERFAMILY SSF47413 18 85 8.45E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 54.946 T 06-07-2017 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 Pfam PF07690 Major Facilitator Superfamily 26 289 2.4E-25 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 Gene3D G3DSA:1.20.1250.20 17 202 2.7E-33 T 06-07-2017 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 Gene3D G3DSA:1.20.1250.20 273 474 4.6E-17 T 06-07-2017 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 1.9E-190 T 06-07-2017 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 SUPERFAMILY SSF103473 264 452 4.45E-64 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS02520 fdfe20d0a4dcff85bc8c640f12f68b52 496 SUPERFAMILY SSF103473 9 203 4.45E-64 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.7E-87 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 Pfam PF03023 MviN-like protein 28 478 8.7E-159 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 PIRSF PIRSF002869 1 511 3.1E-181 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS14420 5e96cdd2534a0b224312e3c3e53b7a65 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 509 3.4E-175 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ LFZ55_RS04685 ff709ce9ac28e8188aaa320fc960607f 265 Pfam PF00753 Metallo-beta-lactamase superfamily 24 112 8.4E-17 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS04685 ff709ce9ac28e8188aaa320fc960607f 265 SUPERFAMILY SSF56281 18 249 6.94E-35 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS04685 ff709ce9ac28e8188aaa320fc960607f 265 Gene3D G3DSA:3.60.15.10 14 244 2.6E-27 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS04685 ff709ce9ac28e8188aaa320fc960607f 265 SMART SM00849 25 186 0.0039 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 SUPERFAMILY SSF46785 4 61 1.58E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 Gene3D G3DSA:3.40.50.1360 76 215 1.2E-16 T 06-07-2017 LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 Gene3D G3DSA:1.10.10.10 1 60 7.4E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 SUPERFAMILY SSF100950 73 234 3.01E-36 T 06-07-2017 LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 SMART SM01134 72 233 6.2E-71 T 06-07-2017 LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 SMART SM00420 6 58 6.5E-22 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 2.6E-51 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS05220 155442845eb97bfff0b9e68575608fb3 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.3E-20 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 Gene3D G3DSA:3.20.20.70 5 294 1.4E-144 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 PIRSF PIRSF009264 1 428 1.8E-206 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 Gene3D G3DSA:1.10.400.20 295 409 1.3E-53 T 06-07-2017 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 2.6E-213 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 Hamap MF_01295 D-tagatose-1,6-bisphosphate aldolase subunit KbaZ [kbaZ]. 1 426 85.203 T 06-07-2017 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 2.2E-202 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 LFZ55_RS02915 283ba45f8633f98bafa851324bf45b67 431 SUPERFAMILY SSF51569 4 423 1.57E-169 T 06-07-2017 LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 PIRSF PIRSF002756 1 338 2.6E-105 T 06-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 Pfam PF12849 PBP superfamily domain 25 307 1.3E-61 T 06-07-2017 IPR024370 PBP domain LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.4E-128 T 06-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 Gene3D G3DSA:3.40.190.10 181 338 5.0E-37 T 06-07-2017 LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 Gene3D G3DSA:3.40.190.10 27 177 5.0E-55 T 06-07-2017 LFZ55_RS24110 eb3333b20334b9be467554ed727945d0 346 SUPERFAMILY SSF53850 29 336 8.69E-97 T 06-07-2017 LFZ55_RS13810 de6cb1adc81106b0eface81e52f9cef7 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 2.5E-46 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame LFZ55_RS13810 de6cb1adc81106b0eface81e52f9cef7 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 9.0E-42 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame LFZ55_RS13810 de6cb1adc81106b0eface81e52f9cef7 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.598 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 Gene3D G3DSA:3.40.50.1950 1 187 6.3E-81 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 Pfam PF02441 Flavoprotein 1 128 1.0E-23 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 SUPERFAMILY SSF52507 1 185 2.75E-63 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 37.322 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 5.1E-75 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 LFZ55_RS04845 30f2bfab143a08b272978b3b9a7077be 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 52.589 T 06-07-2017 IPR032901 Probable UbiX-like flavin prenyltransferase LFZ55_RS00680 7be11c3a35141155a536c7e4ce55dc67 317 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 301 2.2E-129 T 06-07-2017 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 LFZ55_RS00680 7be11c3a35141155a536c7e4ce55dc67 317 SUPERFAMILY SSF53756 1 316 1.41E-73 T 06-07-2017 LFZ55_RS00680 7be11c3a35141155a536c7e4ce55dc67 317 Gene3D G3DSA:3.40.50.2000 165 300 1.0E-36 T 06-07-2017 LFZ55_RS00680 7be11c3a35141155a536c7e4ce55dc67 317 Gene3D G3DSA:3.40.50.2000 1 158 7.0E-32 T 06-07-2017 LFZ55_RS00680 7be11c3a35141155a536c7e4ce55dc67 317 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 315 1.9E-83 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LFZ55_RS24120 15ca96f744b27920cf3057b3345456f8 296 Gene3D G3DSA:1.10.3720.10 25 295 5.1E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24120 15ca96f744b27920cf3057b3345456f8 296 SUPERFAMILY SSF161098 35 286 8.11E-34 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24120 15ca96f744b27920cf3057b3345456f8 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 7.5E-86 T 06-07-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LFZ55_RS24120 15ca96f744b27920cf3057b3345456f8 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.1E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07745 559e77d381f86ee7bf3573ce338c2e07 85 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 82 5.0E-43 T 06-07-2017 IPR020146 Signal transduction protein PmrD LFZ55_RS07745 559e77d381f86ee7bf3573ce338c2e07 85 Pfam PF11183 Polymyxin resistance protein PmrD 1 82 3.6E-40 T 06-07-2017 LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 Gene3D G3DSA:2.70.70.10 102 242 1.1E-39 T 06-07-2017 LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 Pfam PF01551 Peptidase family M23 144 237 7.4E-31 T 06-07-2017 IPR016047 Peptidase M23 LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 SMART SM00257 39 83 1.5E-16 T 06-07-2017 IPR018392 LysM domain LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 SUPERFAMILY SSF51261 39 241 8.37E-48 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 Pfam PF01476 LysM domain 40 82 1.9E-14 T 06-07-2017 IPR018392 LysM domain LFZ55_RS04175 be3d599cb505cc91428d836829f468fb 250 Gene3D G3DSA:3.10.350.10 38 83 1.8E-17 T 06-07-2017 IPR018392 LysM domain LFZ55_RS12695 f5d46e5f34f3e5a7bb93544b937f9aaa 102 Pfam PF06649 Protein of unknown function (DUF1161) 27 80 6.0E-23 T 06-07-2017 IPR010595 Protein of unknown function DUF1161 LFZ55_RS12695 f5d46e5f34f3e5a7bb93544b937f9aaa 102 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 20 80 3.0E-31 T 06-07-2017 IPR010595 Protein of unknown function DUF1161 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 PIRSF PIRSF001394 30 548 1.0E-233 T 06-07-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 Gene3D G3DSA:3.20.130.10 349 537 9.4E-75 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 56 325 5.3E-33 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 Pfam PF05683 Fumarase C-terminus 332 537 1.2E-92 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 SUPERFAMILY SSF117457 361 536 3.14E-61 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 6.7E-64 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS22095 4fe4a12ea85459ea3dbb534d5a208d91 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.9E-87 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 71.494 T 06-07-2017 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 Gene3D G3DSA:2.60.40.10 7 148 1.8E-54 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 SMART SM00642 130 558 2.8E-7 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 Gene3D G3DSA:3.20.20.80 149 565 2.4E-107 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 97 1.6E-19 T 06-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 Pfam PF00128 Alpha amylase, catalytic domain 186 288 1.5E-4 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 633 1.3E-265 T 06-07-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 SUPERFAMILY SSF51445 130 463 6.78E-125 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 SUPERFAMILY SSF51445 492 565 6.78E-125 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS01565 dffe3a2023bfd4dcecac9e7139d7ffcb 658 SUPERFAMILY SSF81296 7 144 3.08E-45 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS00685 21ee22fd4400d2ef0d3dffc3f83fa171 348 Gene3D G3DSA:3.40.50.2000 1 145 2.1E-59 T 06-07-2017 LFZ55_RS00685 21ee22fd4400d2ef0d3dffc3f83fa171 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.2E-88 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LFZ55_RS00685 21ee22fd4400d2ef0d3dffc3f83fa171 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 1.8E-168 T 06-07-2017 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 LFZ55_RS00685 21ee22fd4400d2ef0d3dffc3f83fa171 348 Gene3D G3DSA:3.40.50.2000 174 345 1.2E-54 T 06-07-2017 LFZ55_RS00685 21ee22fd4400d2ef0d3dffc3f83fa171 348 SUPERFAMILY SSF53756 1 345 5.76E-102 T 06-07-2017 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 54.026 T 06-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 PIRSF PIRSF006092 1 157 8.1E-45 T 06-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.1E-26 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 SUPERFAMILY SSF54534 80 155 1.26E-19 T 06-07-2017 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Gene3D G3DSA:3.10.50.30 76 155 2.2E-26 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 8.6E-23 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 2.5E-86 T 06-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Gene3D G3DSA:1.10.287.180 1 75 2.1E-26 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 SUPERFAMILY SSF46557 3 78 7.46E-28 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS01670 e4a113c2d4a7d464a7ffa394a6b2adf4 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.456 T 06-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 281 300 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 2.6E-73 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 330 346 - T 06-07-2017 IPR013793 Porin, Gram-negative type, conserved site LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 Pfam PF00267 Gram-negative porin 27 378 4.5E-153 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 330 347 4.4E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 4.4E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 4.4E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.4E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 4.4E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 SUPERFAMILY SSF56935 22 378 6.8E-78 T 06-07-2017 LFZ55_RS07890 a5d2c97b1a2e3e620baa6f8d682fd234 378 Gene3D G3DSA:2.40.160.10 22 378 1.7E-101 T 06-07-2017 IPR023614 Porin domain LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PIRSF PIRSF000349 1 193 1.1E-87 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 SUPERFAMILY SSF46609 1 84 1.57E-36 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 Gene3D G3DSA:1.10.287.990 20 82 5.3E-26 T 06-07-2017 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.7E-35 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 SUPERFAMILY SSF54719 84 192 1.44E-45 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 06-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13060 a0ac4d14c47dea83cf3c481559b21e09 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.8E-40 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 SUPERFAMILY SSF54980 398 512 3.36E-26 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.2E-57 T 06-07-2017 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 SUPERFAMILY SSF52540 3 207 6.09E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 SUPERFAMILY SSF50447 151 299 3.3E-34 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Pfam PF00679 Elongation factor G C-terminus 397 476 1.2E-21 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 SUPERFAMILY SSF54980 302 387 1.69E-15 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Gene3D G3DSA:3.40.50.300 3 205 5.9E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Gene3D G3DSA:2.40.30.10 206 303 3.0E-26 T 06-07-2017 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Gene3D G3DSA:3.30.70.240 400 477 6.3E-31 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.6E-11 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 2.0E-24 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Gene3D G3DSA:2.40.50.250 483 577 3.0E-40 T 06-07-2017 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.0E-294 T 06-07-2017 IPR006298 GTP-binding protein TypA GO:0005525 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 Gene3D G3DSA:3.30.70.870 304 399 7.9E-38 T 06-07-2017 LFZ55_RS23400 ec0a2bfd04a365e1ba09932847333bbb 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS06170 4b020fa8fa24fc71f34866f4878ace07 128 Pfam PF01592 NifU-like N terminal domain 2 126 2.6E-57 T 06-07-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 LFZ55_RS06170 4b020fa8fa24fc71f34866f4878ace07 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 6.6E-72 T 06-07-2017 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 LFZ55_RS06170 4b020fa8fa24fc71f34866f4878ace07 128 Gene3D G3DSA:3.90.1010.10 2 126 2.3E-57 T 06-07-2017 LFZ55_RS06170 4b020fa8fa24fc71f34866f4878ace07 128 SUPERFAMILY SSF82649 1 125 2.33E-49 T 06-07-2017 LFZ55_RS21540 79d30dbcc362e82d812986adbb2298e9 321 SUPERFAMILY SSF103481 43 142 2.35E-9 T 06-07-2017 LFZ55_RS21540 79d30dbcc362e82d812986adbb2298e9 321 Pfam PF00892 EamA-like transporter family 3 128 4.2E-15 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS21540 79d30dbcc362e82d812986adbb2298e9 321 SUPERFAMILY SSF103481 221 309 1.7E-5 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Gene3D G3DSA:1.20.1270.130 466 544 2.1E-26 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Gene3D G3DSA:1.20.58.360 546 677 2.9E-51 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 478 682 1.9E-68 T 06-07-2017 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 347 366 0.21 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 284 303 8.8 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 263 282 7.1 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 326 345 0.053 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 305 324 0.066 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 389 408 0.93 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 242 261 230.0 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 221 240 5.2 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 368 387 0.011 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00364 200 219 0.016 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SUPERFAMILY SSF52058 177 431 2.65E-37 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Gene3D G3DSA:1.20.58.90 679 756 8.6E-30 T 06-07-2017 LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00369 306 328 230.0 T 06-07-2017 IPR003591 Leucine-rich repeat, typical subtype LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00369 348 370 50.0 T 06-07-2017 IPR003591 Leucine-rich repeat, typical subtype LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00369 201 222 65.0 T 06-07-2017 IPR003591 Leucine-rich repeat, typical subtype LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 SMART SM00369 262 286 22.0 T 06-07-2017 IPR003591 Leucine-rich repeat, typical subtype LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Pfam PF12468 Type III secretion system leucine rich repeat protein 109 172 1.5E-14 T 06-07-2017 IPR032674 LRR-containing bacterial E3 ligase, N-terminal LFZ55_RS16605 f01e1878b65302480975f253dd80ea0c 757 Gene3D G3DSA:3.80.10.10 180 440 1.5E-49 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS17425 f996a3f1333a39aec119aed471afdf09 190 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 37 178 7.0E-80 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LFZ55_RS17425 f996a3f1333a39aec119aed471afdf09 190 SUPERFAMILY SSF56925 31 190 2.67E-80 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS17425 f996a3f1333a39aec119aed471afdf09 190 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 41 187 5.8E-67 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LFZ55_RS17425 f996a3f1333a39aec119aed471afdf09 190 Gene3D G3DSA:2.40.160.20 32 190 1.1E-88 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS17425 f996a3f1333a39aec119aed471afdf09 190 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 7 190 43.179 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LFZ55_RS07945 fb8633cb803629c510361040a3954f92 149 PIRSF PIRSF006105 1 149 6.6E-53 T 06-07-2017 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LFZ55_RS07945 fb8633cb803629c510361040a3954f92 149 SUPERFAMILY SSF48695 48 144 1.06E-39 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS07945 fb8633cb803629c510361040a3954f92 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 8.6E-43 T 06-07-2017 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LFZ55_RS07945 fb8633cb803629c510361040a3954f92 149 Gene3D G3DSA:4.10.1020.10 62 129 5.6E-33 T 06-07-2017 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 Gene3D G3DSA:1.20.1250.20 262 457 1.4E-15 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 Pfam PF07690 Major Facilitator Superfamily 17 406 6.5E-47 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 4.7E-9 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 4.7E-9 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 4.7E-9 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 4.7E-9 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 4.7E-9 T 06-07-2017 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 SUPERFAMILY SSF103473 14 195 1.07E-58 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 SUPERFAMILY SSF103473 245 451 1.07E-58 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 432 9.2E-80 T 06-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LFZ55_RS23980 9d0ac4f265dcce2981f5e0c69fcf4665 475 Gene3D G3DSA:1.20.1250.20 14 188 2.7E-26 T 06-07-2017 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 Gene3D G3DSA:3.90.850.10 3 208 2.8E-52 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 SUPERFAMILY SSF56529 218 425 1.02E-72 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 204 1.3E-39 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 226 423 1.3E-60 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 SUPERFAMILY SSF56529 2 209 2.88E-54 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 Gene3D G3DSA:3.90.850.10 218 427 3.1E-79 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 208 425 8.5E-113 T 06-07-2017 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 LFZ55_RS15005 ab8408e803c62f9846e96b0a9f54b669 429 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 4.9E-85 T 06-07-2017 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 Gene3D G3DSA:2.60.40.1070 155 247 4.2E-16 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 Gene3D G3DSA:2.60.40.360 29 154 1.7E-43 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 108 125 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 SUPERFAMILY SSF49354 24 154 8.37E-41 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 PRINTS PR00969 Pili chaperone signature 136 151 1.8E-28 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 PRINTS PR00969 Pili chaperone signature 175 190 1.8E-28 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 PRINTS PR00969 Pili chaperone signature 109 126 1.8E-28 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 PRINTS PR00969 Pili chaperone signature 80 101 1.8E-28 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 PRINTS PR00969 Pili chaperone signature 30 39 1.8E-28 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 SUPERFAMILY SSF49584 157 250 1.44E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 154 1.4E-44 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS18710 49e64900301b1ac15cf678220bc44688 253 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 180 243 9.9E-14 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 Pfam PF16535 Type III cell invasion protein SipB 82 233 1.1E-53 T 06-07-2017 IPR032391 Invasin IpaB, N-terminal LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 SUPERFAMILY SSF103657 114 276 2.51E-5 T 06-07-2017 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 454 474 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 510 527 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 135 155 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 267 287 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 163 179 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 542 560 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 300 319 3.9E-70 T 06-07-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 LFZ55_RS04985 a98f07d7b24eb2b1976d6ffe3f098210 593 Pfam PF04888 Secretion system effector C (SseC) like family 259 590 1.6E-83 T 06-07-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 LFZ55_RS02615 f1a56da185a655df880fde9b4e691dd2 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.0E-36 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS02615 f1a56da185a655df880fde9b4e691dd2 95 Gene3D G3DSA:3.30.160.100 1 95 3.8E-37 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS02615 f1a56da185a655df880fde9b4e691dd2 95 SUPERFAMILY SSF69754 1 95 3.27E-33 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS02615 f1a56da185a655df880fde9b4e691dd2 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 2.7E-27 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.349 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 5.0E-36 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.3E-38 T 06-07-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 Pfam PF00366 Ribosomal protein S17 10 76 1.1E-34 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 06-07-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 5.3E-14 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 5.3E-14 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 5.3E-14 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 SUPERFAMILY SSF50249 5 82 6.85E-34 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02085 e2dd5c28e8d428c263d7dbecbddcac13 84 Gene3D G3DSA:2.40.50.140 6 82 2.8E-37 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.181 T 06-07-2017 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Pfam PF13286 Phosphohydrolase-associated domain 476 499 9.1E-5 T 06-07-2017 IPR026875 Phosphohydrolase-associated domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Pfam PF01966 HD domain 66 146 3.7E-11 T 06-07-2017 IPR006674 HD domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Gene3D G3DSA:1.10.3550.10 391 503 3.3E-33 T 06-07-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Gene3D G3DSA:1.10.3550.10 123 155 3.3E-33 T 06-07-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 SMART SM00471 62 282 2.7E-12 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 4.0E-143 T 06-07-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Gene3D G3DSA:1.10.3210.10 4 122 5.1E-72 T 06-07-2017 IPR006674 HD domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Gene3D G3DSA:1.10.3210.10 183 268 5.1E-72 T 06-07-2017 IPR006674 HD domain LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 SUPERFAMILY SSF109604 251 432 2.67E-68 T 06-07-2017 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 SUPERFAMILY SSF109604 31 134 2.67E-68 T 06-07-2017 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 SUPERFAMILY SSF109604 182 215 2.67E-68 T 06-07-2017 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 SUPERFAMILY SSF109604 483 501 2.67E-68 T 06-07-2017 LFZ55_RS19360 9d29087ed3c5bb3924f3eeaa725d6d1e 505 Gene3D G3DSA:1.10.3410.10 269 390 1.9E-32 T 06-07-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 Gene3D G3DSA:3.90.930.12 2 82 9.7E-29 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 Pfam PF00347 Ribosomal protein L6 11 82 2.1E-18 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 Pfam PF00347 Ribosomal protein L6 90 164 8.9E-19 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.0E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.0E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.0E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 SUPERFAMILY SSF56053 1 82 1.44E-23 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 06-07-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.45 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.9E-73 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 SUPERFAMILY SSF56053 83 177 8.06E-36 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 Gene3D G3DSA:3.90.930.12 83 177 2.7E-40 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02115 4af8311a85e1ed50d3a11ab4e2fe17b2 177 PIRSF PIRSF002162 1 177 1.9E-43 T 06-07-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 SUPERFAMILY SSF53335 11 188 2.52E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 PIRSF PIRSF004553 11 191 2.8E-60 T 06-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 189 3.3E-73 T 06-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 1.4E-62 T 06-07-2017 LFZ55_RS01400 b01f1b5a8668f7f047608d442ee8c838 198 Gene3D G3DSA:3.40.50.150 5 194 1.5E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS23645 b8db3fc7d2dd3770cdd5f5da5a5f4c68 206 PIRSF PIRSF006324 1 206 7.8E-42 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS23645 b8db3fc7d2dd3770cdd5f5da5a5f4c68 206 Pfam PF01810 LysE type translocator 14 205 1.8E-56 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS23645 b8db3fc7d2dd3770cdd5f5da5a5f4c68 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 3.6E-69 T 06-07-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 Gene3D G3DSA:3.40.190.10 135 185 8.3E-5 T 06-07-2017 LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.6E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 SUPERFAMILY SSF46785 8 92 2.79E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 SUPERFAMILY SSF53850 93 297 1.74E-18 T 06-07-2017 LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 Pfam PF03466 LysR substrate binding domain 136 297 2.9E-13 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 Gene3D G3DSA:3.40.190.10 186 272 1.1E-8 T 06-07-2017 LFZ55_RS17535 b8d2f95d830117c0782d15c710b841ea 311 Gene3D G3DSA:1.10.10.10 5 89 1.7E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-20 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 SUPERFAMILY SSF158651 1 75 2.62E-32 T 06-07-2017 LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.51 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 Gene3D G3DSA:1.10.3390.10 1 75 7.2E-39 T 06-07-2017 IPR023202 YejL-like domain LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.3E-25 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 LFZ55_RS08090 3b05d75456c6081b4b399ae857a4b840 75 PIRSF PIRSF006188 1 72 1.8E-37 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Pfam PF10531 SLBB domain 296 344 8.5E-13 T 06-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 7.1E-33 T 06-07-2017 IPR026902 RnfC Barrel sandwich hybrid domain LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Pfam PF12838 4Fe-4S dicluster domain 376 430 5.7E-9 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 SUPERFAMILY SSF142019 94 303 4.32E-61 T 06-07-2017 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 1.3E-47 T 06-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 3.9E-180 T 06-07-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Gene3D G3DSA:1.10.1060.10 360 446 9.4E-18 T 06-07-2017 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 702 265.378 T 06-07-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 LFZ55_RS12930 c4b8f8509da541d12e2418a00621501a 702 SUPERFAMILY SSF46548 335 437 7.85E-20 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SMART SM00482 686 892 2.0E-126 T 06-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SUPERFAMILY SSF47807 171 291 8.97E-29 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.9E-80 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:3.30.70.370 664 711 7.3E-68 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:3.30.70.370 819 928 7.3E-68 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SUPERFAMILY SSF56672 523 928 2.67E-161 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 2.6E-287 T 06-07-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 9.4E-55 T 06-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SUPERFAMILY SSF53098 327 518 9.11E-56 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:3.30.420.10 329 542 1.5E-86 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SMART SM00279 173 208 1.2E-13 T 06-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SMART SM00474 330 517 3.0E-50 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Pfam PF00476 DNA polymerase family A 552 925 2.5E-159 T 06-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Pfam PF01612 3'-5' exonuclease 330 517 1.1E-45 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 270 1.5E-29 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 06-07-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:1.20.1060.10 543 663 2.2E-36 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:3.40.50.1010 8 186 3.9E-73 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SMART SM00475 7 268 1.1E-142 T 06-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:1.10.150.20 712 818 2.8E-36 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 Gene3D G3DSA:1.10.150.20 187 253 2.4E-24 T 06-07-2017 LFZ55_RS23450 10009cf03e68c0f7e542292f43208059 928 SUPERFAMILY SSF88723 7 170 1.07E-56 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS09220 baaf39872a6fcbe013686c4e4abfa871 88 Gene3D G3DSA:1.10.10.60 12 84 2.7E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09220 baaf39872a6fcbe013686c4e4abfa871 88 SUPERFAMILY SSF46689 1 73 8.78E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09220 baaf39872a6fcbe013686c4e4abfa871 88 Pfam PF01527 Transposase 2 71 7.1E-23 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS10110 baaf39872a6fcbe013686c4e4abfa871 88 Gene3D G3DSA:1.10.10.60 12 84 2.7E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10110 baaf39872a6fcbe013686c4e4abfa871 88 SUPERFAMILY SSF46689 1 73 8.78E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10110 baaf39872a6fcbe013686c4e4abfa871 88 Pfam PF01527 Transposase 2 71 7.1E-23 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS15575 68a69a2c7e56ac432ea15f8d7ba4d52c 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 1.3E-41 T 06-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component LFZ55_RS15575 68a69a2c7e56ac432ea15f8d7ba4d52c 187 Gene3D G3DSA:3.40.50.10610 15 182 7.4E-16 T 06-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component LFZ55_RS15575 68a69a2c7e56ac432ea15f8d7ba4d52c 187 SUPERFAMILY SSF159594 24 184 6.28E-31 T 06-07-2017 LFZ55_RS23335 87717135297f52cc89e0af40d7c24eec 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 287 23.629 T 06-07-2017 IPR023679 Uncharacterised protein family UPF0761, bacterial LFZ55_RS23335 87717135297f52cc89e0af40d7c24eec 290 Pfam PF03631 Virulence factor BrkB 29 274 4.2E-58 T 06-07-2017 IPR017039 Virulence factor BrkB LFZ55_RS23335 87717135297f52cc89e0af40d7c24eec 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 3.3E-105 T 06-07-2017 IPR017039 Virulence factor BrkB LFZ55_RS23335 87717135297f52cc89e0af40d7c24eec 290 PIRSF PIRSF035875 1 290 3.1E-74 T 06-07-2017 IPR017039 Virulence factor BrkB LFZ55_RS09055 64d624d2bc7ce3fa03e6f61c7a0267bc 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site LFZ55_RS09055 64d624d2bc7ce3fa03e6f61c7a0267bc 94 SUPERFAMILY SSF143414 4 90 8.76E-32 T 06-07-2017 LFZ55_RS09055 64d624d2bc7ce3fa03e6f61c7a0267bc 94 SMART SM00877 4 80 2.0E-35 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09055 64d624d2bc7ce3fa03e6f61c7a0267bc 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 7.0E-20 T 06-07-2017 LFZ55_RS09055 64d624d2bc7ce3fa03e6f61c7a0267bc 94 Pfam PF00936 BMC domain 5 80 3.2E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 Pfam PF00654 Voltage gated chloride channel 89 437 1.3E-91 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 SUPERFAMILY SSF81340 16 452 1.83E-111 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 Gene3D G3DSA:1.10.3080.10 23 452 1.0E-104 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 PRINTS PR00762 Chloride channel signature 352 372 1.2E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 PRINTS PR00762 Chloride channel signature 405 424 1.2E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 PRINTS PR00762 Chloride channel signature 387 403 1.2E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 PRINTS PR00762 Chloride channel signature 102 119 1.2E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 PRINTS PR00762 Chloride channel signature 183 202 1.2E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS19385 58108198da33cc4997d12979fa39ac6f 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 54.459 T 06-07-2017 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 SUPERFAMILY SSF46785 6 85 1.91E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 Pfam PF07702 UTRA domain 97 235 3.7E-31 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 Gene3D G3DSA:1.10.10.10 6 73 3.2E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.3E-22 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 Gene3D G3DSA:3.40.1410.10 74 239 7.2E-43 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 SUPERFAMILY SSF64288 65 239 2.51E-39 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 SMART SM00345 17 76 1.0E-22 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.5E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.5E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS01195 62827f7bfaeb89ebc521c739ad9a6b51 239 SMART SM00866 97 236 7.0E-25 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS01905 0fcadda38b9f2b42d6ec835729ffd692 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 4.8E-96 T 06-07-2017 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS01905 0fcadda38b9f2b42d6ec835729ffd692 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 7 266 6.2E-98 T 06-07-2017 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 LFZ55_RS01905 0fcadda38b9f2b42d6ec835729ffd692 266 Gene3D G3DSA:3.90.226.10 86 199 5.7E-15 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS01905 0fcadda38b9f2b42d6ec835729ffd692 266 SUPERFAMILY SSF52096 20 234 1.71E-21 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 Pfam PF03486 HI0933-like protein 5 392 9.1E-157 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 SUPERFAMILY SSF160996 190 338 7.19E-45 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 Gene3D G3DSA:3.50.50.60 3 186 2.6E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 Gene3D G3DSA:3.50.50.60 339 395 2.6E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 2.2E-126 T 06-07-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 SUPERFAMILY SSF51905 3 188 7.93E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 SUPERFAMILY SSF51905 337 395 7.93E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 Gene3D G3DSA:2.40.30.10 188 270 4.1E-30 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.0E-7 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.0E-7 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-7 T 06-07-2017 LFZ55_RS01320 fb2c387a69c658f4c6c66f513ca34299 397 Gene3D G3DSA:1.10.8.260 271 321 2.9E-26 T 06-07-2017 IPR023166 HI0933 insert-like domain LFZ55_RS18800 c00d9d83a31a6cc537ab7e265012d252 1062 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 508 518 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS18800 c00d9d83a31a6cc537ab7e265012d252 1062 SUPERFAMILY SSF141729 259 373 7.72E-28 T 06-07-2017 LFZ55_RS18800 c00d9d83a31a6cc537ab7e265012d252 1062 Pfam PF00577 Outer membrane usher protein 398 968 5.4E-144 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18800 c00d9d83a31a6cc537ab7e265012d252 1062 Pfam PF13954 PapC N-terminal domain 238 382 3.4E-39 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS18800 c00d9d83a31a6cc537ab7e265012d252 1062 Pfam PF13953 PapC C-terminal domain 978 1042 1.9E-21 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Gene3D G3DSA:3.30.413.10 430 557 4.4E-33 T 06-07-2017 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Gene3D G3DSA:3.30.413.10 150 340 1.0E-72 T 06-07-2017 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Gene3D G3DSA:3.90.480.10 342 422 3.0E-62 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Gene3D G3DSA:3.90.480.10 74 146 3.0E-62 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 SUPERFAMILY SSF56014 150 344 2.62E-61 T 06-07-2017 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 SUPERFAMILY SSF55124 346 422 8.04E-21 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 SUPERFAMILY SSF56014 428 559 1.96E-33 T 06-07-2017 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 539 0.95 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 3.3E-47 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 1.3E-299 T 06-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 139 9.0E-13 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 415 4.6E-13 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 SUPERFAMILY SSF55124 13 142 4.74E-26 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.1E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.1E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04705 fd23d7771184451c23f75b87b27ec37c 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.565 T 06-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 SUPERFAMILY SSF58104 232 515 1.19E-67 T 06-07-2017 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 Pfam PF00672 HAMP domain 193 259 2.2E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 SMART SM00304 212 264 1.5E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 6.3E-55 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 6.3E-55 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 6.3E-55 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 6.3E-55 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 6.3E-55 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 173 1.6E-17 T 06-07-2017 IPR024478 4HB MCP domain LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 SMART SM00283 265 512 6.1E-73 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 Gene3D G3DSA:1.10.287.950 280 484 1.1E-53 T 06-07-2017 LFZ55_RS03150 9b302c8d40d6571649efa61434da9524 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 511 6.7E-51 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 SUPERFAMILY SSF81891 120 402 7.98E-56 T 06-07-2017 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 SUPERFAMILY SSF81301 2 119 1.63E-31 T 06-07-2017 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.333 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Pfam PF01743 Poly A polymerase head domain 3 122 8.5E-18 T 06-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.451 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 3.4E-15 T 06-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Gene3D G3DSA:1.10.3090.10 122 359 7.3E-56 T 06-07-2017 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Gene3D G3DSA:3.30.460.10 2 121 6.1E-31 T 06-07-2017 LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 Pfam PF01966 HD domain 231 328 3.6E-12 T 06-07-2017 IPR006674 HD domain LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 SMART SM00471 224 359 0.0079 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS03240 0bbf97a0015a1b382a4185cae2e0ef78 413 PIRSF PIRSF000813 1 408 4.2E-206 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 491 2.3E-12 T 06-07-2017 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 2.3E-45 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 Gene3D G3DSA:3.50.50.60 2 262 5.4E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 SUPERFAMILY SSF51905 312 374 4.37E-34 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 SUPERFAMILY SSF51905 1 260 4.37E-34 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01585 bb3626e2d869f1429a7d4705123a50fd 502 SUPERFAMILY SSF54373 226 319 6.08E-6 T 06-07-2017 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 2.1E-19 T 06-07-2017 IPR029442 GyrI-like small molecule binding domain LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 SMART SM00342 21 104 1.9E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 Gene3D G3DSA:1.10.10.60 58 119 1.4E-23 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 SMART SM00871 126 288 1.4E-12 T 06-07-2017 IPR010499 Bacterial transcription activator, effector binding LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 Gene3D G3DSA:3.20.80.10 123 289 1.7E-62 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 Gene3D G3DSA:1.10.10.60 3 57 5.7E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 SUPERFAMILY SSF46689 6 55 1.04E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 SUPERFAMILY SSF46689 57 108 2.6E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20370 0062c56631efeb00c2e279ad0b4ad8d9 289 SUPERFAMILY SSF55136 122 288 3.92E-50 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 SMART SM00919 163 401 3.6E-142 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Gene3D G3DSA:3.40.50.720 161 448 7.1E-90 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 SUPERFAMILY SSF53659 430 754 6.17E-92 T 06-07-2017 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Gene3D G3DSA:3.40.50.10380 11 160 1.3E-51 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 6.4E-20 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Gene3D G3DSA:3.40.50.10750 570 726 1.5E-54 T 06-07-2017 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 06-07-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 9.2E-29 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 SMART SM01274 18 151 2.3E-82 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 4.1E-100 T 06-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 SUPERFAMILY SSF51735 163 453 5.8E-87 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 PIRSF PIRSF036684 1 758 0.0 T 06-07-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 LFZ55_RS06885 6c2056342be2a46393637dd566bffd70 759 SUPERFAMILY SSF53223 10 161 4.75E-54 T 06-07-2017 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 2.2E-120 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 4.8E-179 T 06-07-2017 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 Gene3D G3DSA:3.40.50.1970 2 183 2.1E-55 T 06-07-2017 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 Gene3D G3DSA:1.20.1090.10 184 381 5.4E-75 T 06-07-2017 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 SUPERFAMILY SSF56796 3 380 2.22E-126 T 06-07-2017 LFZ55_RS23215 3ea766212b88b3a22e1b39c0a60fb3ae 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS08775 86afa17c9eb5b588f8c0c9ecc1a04bc6 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 1.8E-208 T 06-07-2017 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LFZ55_RS08775 86afa17c9eb5b588f8c0c9ecc1a04bc6 297 Gene3D G3DSA:3.90.550.10 2 276 1.8E-64 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08775 86afa17c9eb5b588f8c0c9ecc1a04bc6 297 SUPERFAMILY SSF53448 3 284 1.62E-57 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08775 86afa17c9eb5b588f8c0c9ecc1a04bc6 297 Pfam PF00483 Nucleotidyl transferase 5 274 1.3E-22 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 Gene3D G3DSA:3.40.220.10 1 161 1.5E-66 T 06-07-2017 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 SUPERFAMILY SSF53187 180 496 1.29E-125 T 06-07-2017 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.561 T 06-07-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 Gene3D G3DSA:3.40.630.10 171 496 2.7E-138 T 06-07-2017 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 SUPERFAMILY SSF52949 1 184 5.89E-52 T 06-07-2017 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 3.7E-119 T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LFZ55_RS21220 1e057b31c62ea7eaa5943255c5793d88 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-33 T 06-07-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 Gene3D G3DSA:3.30.420.40 2 254 1.8E-107 T 06-07-2017 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.9E-230 T 06-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.361 T 06-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 Gene3D G3DSA:3.30.420.40 256 498 7.6E-105 T 06-07-2017 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 2.0E-61 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 2.2E-93 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 SUPERFAMILY SSF53067 5 254 1.11E-95 T 06-07-2017 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 PIRSF PIRSF000538 4 502 2.6E-178 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS23095 a975db28ed28a901c24505a2db6f1f26 502 SUPERFAMILY SSF53067 256 497 2.02E-87 T 06-07-2017 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 2.4E-16 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Gene3D G3DSA:2.40.110.10 237 348 9.2E-17 T 06-07-2017 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 SUPERFAMILY SSF56645 116 355 9.82E-47 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 3.9E-118 T 06-07-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 3.6E-12 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 5.5E-9 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 SUPERFAMILY SSF47203 360 515 4.83E-21 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Gene3D G3DSA:1.10.540.10 95 234 6.9E-33 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LFZ55_RS19045 7fba3b5dc54651bb1661cde530acff58 814 Gene3D G3DSA:1.20.140.10 349 505 4.3E-23 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 SMART SM00047 145 309 2.3E-62 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 Pfam PF10135 Rod binding protein 50 97 4.1E-18 T 06-07-2017 IPR019301 Flagellar protein FlgJ, N-terminal LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 165 298 3.6E-20 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 298 4.7E-122 T 06-07-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 174 192 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 216 237 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 298 315 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 260 279 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 280 298 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 194 215 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 238 259 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 8.3E-178 T 06-07-2017 LFZ55_RS14355 701631682b98677ca0d5b129cacbd637 316 PRINTS PR01002 Flagellar protein FlgJ signature 150 173 8.3E-178 T 06-07-2017 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 2.3E-27 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 1.3E-21 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 1.3E-21 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 1.3E-21 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 5 104 17.897 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS09585 c1f8059e833d76d2429f1ec3324aa288 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 104 3.5E-38 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LFZ55_RS10905 265e9d21b5f987ddde49be463d7b0a64 76 SUPERFAMILY SSF140376 2 75 9.94E-29 T 06-07-2017 LFZ55_RS10905 265e9d21b5f987ddde49be463d7b0a64 76 Pfam PF06150 ChaB 9 75 1.4E-28 T 06-07-2017 IPR009317 ChaB LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.726 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-22 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 Gene3D G3DSA:1.10.287.1040 6 76 4.6E-30 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 Pfam PF02609 Exonuclease VII small subunit 11 62 1.5E-21 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-24 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 PIRSF PIRSF006488 1 80 5.1E-24 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS18325 66d924c851765bbc06673f9b657fa8e0 80 SUPERFAMILY SSF116842 3 71 2.75E-22 T 06-07-2017 LFZ55_RS03330 e9994626a858ca8173f6c6a555c87162 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 1.6E-42 T 06-07-2017 IPR009659 Protein of unknown function DUF1249 LFZ55_RS21650 f95e73f64e5d2ea51974a7c605ebd7de 109 SUPERFAMILY SSF159871 10 108 4.71E-19 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21650 f95e73f64e5d2ea51974a7c605ebd7de 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 3.7E-16 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21650 f95e73f64e5d2ea51974a7c605ebd7de 109 Gene3D G3DSA:3.30.1660.10 43 108 2.4E-15 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS08700 65ada219a4d298fd7574a015a9278de8 405 Gene3D G3DSA:3.40.50.2000 296 363 7.8E-4 T 06-07-2017 LFZ55_RS08700 65ada219a4d298fd7574a015a9278de8 405 Pfam PF13692 Glycosyl transferases group 1 285 363 2.2E-6 T 06-07-2017 LFZ55_RS08700 65ada219a4d298fd7574a015a9278de8 405 TIGRFAM TIGR04015 WcaC: colanic acid biosynthesis glycosyltransferase WcaC 1 405 5.1E-265 T 06-07-2017 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC LFZ55_RS08700 65ada219a4d298fd7574a015a9278de8 405 Pfam PF13439 Glycosyltransferase Family 4 13 224 7.3E-9 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS08700 65ada219a4d298fd7574a015a9278de8 405 SUPERFAMILY SSF53756 11 404 5.76E-23 T 06-07-2017 LFZ55_RS08990 577e9c7247c78b9e5a66490d6ee73733 461 Gene3D G3DSA:3.40.605.10 33 249 2.2E-26 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS08990 577e9c7247c78b9e5a66490d6ee73733 461 Pfam PF00171 Aldehyde dehydrogenase family 32 415 2.5E-30 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS08990 577e9c7247c78b9e5a66490d6ee73733 461 PIRSF PIRSF036410 1 461 1.5E-213 T 06-07-2017 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related LFZ55_RS08990 577e9c7247c78b9e5a66490d6ee73733 461 Gene3D G3DSA:3.40.309.10 250 420 8.4E-24 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS08990 577e9c7247c78b9e5a66490d6ee73733 461 SUPERFAMILY SSF53720 32 452 1.44E-61 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.5E-11 T 06-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 124 289 1.6E-53 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 SUPERFAMILY SSF82866 78 303 5.62E-40 T 06-07-2017 LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 3.4E-87 T 06-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.409 T 06-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 Gene3D G3DSA:1.20.1640.10 140 305 2.0E-24 T 06-07-2017 LFZ55_RS18390 7ba14c657c8cfc822b2d0fffee0c4b33 323 Pfam PF02355 Protein export membrane protein 118 301 8.6E-69 T 06-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 9.9E-125 T 06-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 SMART SM00859 3 146 1.2E-55 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 Gene3D G3DSA:3.30.360.10 163 308 1.1E-46 T 06-07-2017 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 SUPERFAMILY SSF51735 1 171 1.92E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 SUPERFAMILY SSF55347 154 308 6.26E-48 T 06-07-2017 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 4.1E-18 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.164 T 06-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 06-07-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 145 1.0E-33 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS22965 3f1d27c84d0e5a1429262b3db17ac515 334 Gene3D G3DSA:3.40.50.720 1 162 3.4E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 5.1E-36 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.394 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 2.0E-33 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 Gene3D G3DSA:1.10.10.610 1 72 8.2E-39 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 PIRSF PIRSF006169 1 72 1.7E-38 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS01870 6c216c0799f76eeda9d6aad299beb1d2 72 SUPERFAMILY SSF118001 1 71 4.58E-30 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 SMART SM00342 197 280 5.8E-32 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 Pfam PF12833 Helix-turn-helix domain 204 281 3.0E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 Gene3D G3DSA:1.10.10.60 234 279 4.1E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 SUPERFAMILY SSF46689 233 282 8.51E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 Gene3D G3DSA:1.10.10.60 182 233 4.8E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 SUPERFAMILY SSF46689 182 231 2.69E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.2E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS07230 4abff11a7ba886c015a6e489c4de6eb8 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.2E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 Gene3D G3DSA:1.10.10.10 4 54 1.4E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 Gene3D G3DSA:3.40.50.1360 78 217 1.1E-14 T 06-07-2017 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 Pfam PF00455 DeoR C terminal sensor domain 76 234 6.4E-52 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 SUPERFAMILY SSF100950 76 237 1.04E-31 T 06-07-2017 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 SMART SM00420 7 59 1.0E-14 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 5.2E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 5.2E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 SUPERFAMILY SSF46785 6 58 1.53E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 SMART SM01134 74 235 5.4E-68 T 06-07-2017 LFZ55_RS10635 4eb250f3cd5f4495ef1e7a90f406de65 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 57 5.4E-15 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11045 82af5b995fadb56e2c32a3652e111a44 302 Gene3D G3DSA:1.10.3720.10 102 299 3.2E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11045 82af5b995fadb56e2c32a3652e111a44 302 SUPERFAMILY SSF161098 100 283 5.49E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11045 82af5b995fadb56e2c32a3652e111a44 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 1.2E-12 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LFZ55_RS11045 82af5b995fadb56e2c32a3652e111a44 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 2.5E-25 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 7.9E-141 T 06-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.4E-78 T 06-07-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Gene3D G3DSA:3.30.470.20 192 298 1.0E-48 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Gene3D G3DSA:3.30.1490.20 137 191 3.0E-31 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Gene3D G3DSA:3.40.50.20 2 129 1.2E-56 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 181.564 T 06-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.5E-48 T 06-07-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 SUPERFAMILY SSF52440 2 122 4.03E-47 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS03850 0b231d2cf71fe2fe1ea5db557db2abe6 315 SUPERFAMILY SSF56059 123 312 1.44E-60 T 06-07-2017 LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.6E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.6E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.6E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.6E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.2E-29 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 Pfam PF01455 HupF/HypC family 1 72 1.4E-25 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 06-07-2017 IPR019812 Hydrogenase assembly chaperone, conserved site LFZ55_RS03520 b8ba9d4834da1dc698dee0851bb39cae 82 SUPERFAMILY SSF159127 1 76 8.24E-24 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 4.9E-23 T 06-07-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 Gene3D G3DSA:3.30.70.1150 83 162 6.8E-27 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 Gene3D G3DSA:3.30.70.260 1 76 8.3E-36 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 SUPERFAMILY SSF55021 79 162 3.15E-25 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 Pfam PF13710 ACT domain 12 73 2.7E-15 T 06-07-2017 LFZ55_RS19800 c18812f75756b0d27d3879186ecfa94a 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 3.4E-68 T 06-07-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 LFZ55_RS08955 4fbae3c3daa68c0e7dfa40f32f26cb8b 300 SUPERFAMILY SSF54211 15 164 8.35E-21 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS08955 4fbae3c3daa68c0e7dfa40f32f26cb8b 300 PIRSF PIRSF033887 9 292 2.5E-65 T 06-07-2017 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 LFZ55_RS08955 4fbae3c3daa68c0e7dfa40f32f26cb8b 300 Pfam PF00288 GHMP kinases N terminal domain 84 132 8.2E-9 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LFZ55_RS08955 4fbae3c3daa68c0e7dfa40f32f26cb8b 300 Gene3D G3DSA:3.30.230.10 59 128 6.5E-10 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.4E-45 T 06-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 Gene3D G3DSA:3.40.50.1370 145 292 1.0E-54 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.7E-27 T 06-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.716 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 SUPERFAMILY SSF53671 4 306 2.8E-99 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.3E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.3E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.3E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 8.9E-124 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21300 8e0bc382bb1409f57b01114faf989481 311 Gene3D G3DSA:3.40.50.1370 7 144 1.5E-52 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 34 515 2.8E-108 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 SUPERFAMILY SSF69279 207 382 1.87E-47 T 06-07-2017 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 513 1.3E-74 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 610 753 4.1E-45 T 06-07-2017 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 SUPERFAMILY SSF69279 22 207 7.37E-47 T 06-07-2017 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 SUPERFAMILY SSF69255 381 470 2.62E-23 T 06-07-2017 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 1.4E-36 T 06-07-2017 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 Pfam PF05954 Phage late control gene D protein (GPD) 42 355 1.5E-63 T 06-07-2017 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 Gene3D G3DSA:3.55.50.10 116 211 1.1E-27 T 06-07-2017 LFZ55_RS12345 7bbc727dfdb3ab097ee925d60800c1a2 785 Gene3D G3DSA:2.40.50.230 389 470 2.5E-22 T 06-07-2017 IPR006531 Gp5 N-terminal LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Gene3D G3DSA:3.40.50.2300 176 308 1.1E-54 T 06-07-2017 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 SMART SM00354 1 71 3.0E-37 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Gene3D G3DSA:3.40.50.2300 54 175 3.9E-40 T 06-07-2017 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.8E-40 T 06-07-2017 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Gene3D G3DSA:1.10.260.40 2 53 7.9E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 SUPERFAMILY SSF53822 60 340 1.43E-93 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13075 ea3f58a4fa772babed16e029542df3f1 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.526 T 06-07-2017 IPR023588 Transcription regulator HTH, PurR GO:0006355 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 Gene3D G3DSA:1.10.357.10 79 212 1.2E-58 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.1E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.1E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 Gene3D G3DSA:1.10.10.60 53 78 2.9E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 211 2.5E-57 T 06-07-2017 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 Gene3D G3DSA:1.10.10.60 11 52 1.0E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 SUPERFAMILY SSF48498 88 211 6.67E-41 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.4E-13 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS14900 45c08caa266f61ba05dc88823e24e4db 212 SUPERFAMILY SSF46689 12 91 1.6E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12540 140d24f1a3f30470b2a7489c9fcfa138 308 Pfam PF04960 Glutaminase 24 308 2.8E-113 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 LFZ55_RS12540 140d24f1a3f30470b2a7489c9fcfa138 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.664 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 LFZ55_RS12540 140d24f1a3f30470b2a7489c9fcfa138 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 9.7E-130 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 LFZ55_RS12540 140d24f1a3f30470b2a7489c9fcfa138 308 SUPERFAMILY SSF56601 7 308 1.77E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS12540 140d24f1a3f30470b2a7489c9fcfa138 308 Gene3D G3DSA:3.40.710.10 8 308 3.1E-126 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 SMART SM00382 142 327 4.5E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Gene3D G3DSA:2.40.10.170 2 75 1.5E-30 T 06-07-2017 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 SUPERFAMILY SSF47917 345 459 1.62E-55 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 SUPERFAMILY SSF50615 1 75 1.62E-24 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.6E-64 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 SUPERFAMILY SSF52540 77 348 1.44E-90 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.088 T 06-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Gene3D G3DSA:3.40.50.300 77 343 3.7E-109 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.8E-264 T 06-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Gene3D G3DSA:1.10.1140.10 345 460 2.2E-58 T 06-07-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24090 1dd01ab01564a98829e9f130180ca332 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.2E-20 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Gene3D G3DSA:1.20.272.10 249 347 3.1E-42 T 06-07-2017 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 SUPERFAMILY SSF48019 252 434 1.13E-71 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Gene3D G3DSA:3.40.50.300 11 153 7.8E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 2.5E-65 T 06-07-2017 IPR021886 MgsA AAA+ ATPase C-terminal LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 SUPERFAMILY SSF52540 6 234 3.4E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Pfam PF16193 AAA C-terminal domain 188 267 4.7E-21 T 06-07-2017 IPR032423 AAA ATPase, C-terminal domain LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Gene3D G3DSA:1.10.8.60 154 223 1.7E-8 T 06-07-2017 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Gene3D G3DSA:1.10.3710.10 348 445 1.7E-35 T 06-07-2017 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 6.4E-17 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS15825 a89eda56df4a03e5dd6cd11dc25fb786 447 SMART SM00382 49 165 5.5E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.067 T 06-07-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 SMART SM00962 100 296 2.6E-120 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.7E-182 T 06-07-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 SMART SM00963 1 86 2.4E-37 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Gene3D G3DSA:1.20.120.140 2 89 3.6E-36 T 06-07-2017 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 SUPERFAMILY SSF52540 42 354 1.2E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Pfam PF02978 Signal peptide binding domain 329 427 1.5E-33 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 SMART SM00382 99 247 7.9E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.9E-23 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Gene3D G3DSA:3.40.50.300 94 297 1.5E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.0E-75 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 SUPERFAMILY SSF47446 298 431 7.06E-47 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LFZ55_RS05780 8e83d502c6b8e1474b281375dd1ca27c 453 Gene3D G3DSA:1.10.260.30 329 432 1.2E-41 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 277 2.5E-48 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 SUPERFAMILY SSF53850 16 280 2.48E-63 T 06-07-2017 LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 Gene3D G3DSA:3.40.190.10 44 132 8.5E-31 T 06-07-2017 LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 Gene3D G3DSA:3.40.190.10 240 282 8.5E-31 T 06-07-2017 LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 Gene3D G3DSA:3.40.190.10 133 239 4.7E-31 T 06-07-2017 LFZ55_RS17290 ccd581f015b15e8cfcc666e916b5b4fc 308 SMART SM00062 47 279 2.2E-67 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS24740 6e7f79ec2177b7d33969fc8568c4043f 243 Pfam PF01844 HNH endonuclease 168 223 2.6E-7 T 06-07-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LFZ55_RS11700 6d341f02bbd7821c337ecac2bcbb66f4 201 SUPERFAMILY SSF52218 1 199 1.16E-57 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS11700 6d341f02bbd7821c337ecac2bcbb66f4 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.293 T 06-07-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 LFZ55_RS11700 6d341f02bbd7821c337ecac2bcbb66f4 201 Gene3D G3DSA:3.40.50.360 1 199 2.2E-66 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS11700 6d341f02bbd7821c337ecac2bcbb66f4 201 Pfam PF02525 Flavodoxin-like fold 3 195 6.5E-45 T 06-07-2017 IPR003680 Flavodoxin-like fold LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 SMART SM00825 Beta-ketoacyl synthase 6 413 3.9E-15 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 2.3E-197 T 06-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 SUPERFAMILY SSF53901 3 252 4.98E-77 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 Gene3D G3DSA:3.40.47.10 263 412 7.7E-65 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 Gene3D G3DSA:3.40.47.10 2 260 4.2E-77 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 5.4E-40 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 SUPERFAMILY SSF53901 215 412 8.95E-75 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.2E-63 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal LFZ55_RS14280 8bf0a4069c823695b1d10ed524be0d3d 413 PIRSF PIRSF000447 1 413 5.3E-204 T 06-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Gene3D G3DSA:3.40.50.1220 197 350 9.2E-63 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Gene3D G3DSA:3.40.50.970 12 186 1.0E-71 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 SUPERFAMILY SSF52467 165 359 2.24E-56 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 1.5E-57 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 SUPERFAMILY SSF52518 10 193 1.95E-60 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 SUPERFAMILY SSF52518 366 560 2.6E-63 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Gene3D G3DSA:3.40.50.970 351 553 1.2E-68 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 5.6E-46 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 5.7E-45 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LFZ55_RS00255 cfefb7e2ddfc07f89fd9b9694a3ab99d 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 1.4E-197 T 06-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 LFZ55_RS22280 41d266d06c8f9e01d8e3597b9f1ab940 189 Pfam PF13435 Cytochrome c554 and c-prime 37 84 0.0087 T 06-07-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS22280 41d266d06c8f9e01d8e3597b9f1ab940 189 SUPERFAMILY SSF48695 6 170 3.29E-30 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS22280 41d266d06c8f9e01d8e3597b9f1ab940 189 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 134 172 4.9E-5 T 06-07-2017 IPR010177 Doubled CXXCH motif LFZ55_RS22280 41d266d06c8f9e01d8e3597b9f1ab940 189 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 39 172 2.2E-57 T 06-07-2017 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 LFZ55_RS22280 41d266d06c8f9e01d8e3597b9f1ab940 189 Gene3D G3DSA:1.10.3820.10 27 175 1.5E-15 T 06-07-2017 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 SMART SM00562 3 140 5.3E-83 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 SUPERFAMILY SSF54919 1 141 3.27E-57 T 06-07-2017 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.216 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.3E-53 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 Gene3D G3DSA:3.30.70.141 1 140 2.0E-57 T 06-07-2017 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 06-07-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.9E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.9E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.9E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.9E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS06250 6a44aa849a01ac696fb177edc5490f68 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.9E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS24520 5070cfb7afe75ef14a24d994f9cdb427 161 SUPERFAMILY SSF53955 15 147 4.5E-27 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS24520 5070cfb7afe75ef14a24d994f9cdb427 161 Pfam PF01464 Transglycosylase SLT domain 21 138 5.0E-21 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS24520 5070cfb7afe75ef14a24d994f9cdb427 161 Gene3D G3DSA:1.10.530.10 19 147 3.4E-18 T 06-07-2017 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 Pfam PF01171 PP-loop family 16 192 2.5E-56 T 06-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 SUPERFAMILY SSF56037 320 428 4.45E-31 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 197 3.4E-49 T 06-07-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 402 4.6E-16 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 Gene3D G3DSA:3.40.50.620 12 164 5.2E-9 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 SUPERFAMILY SSF82829 231 313 1.83E-26 T 06-07-2017 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 Pfam PF11734 TilS substrate C-terminal domain 357 428 3.6E-25 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 SMART SM00977 357 428 1.7E-25 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 SUPERFAMILY SSF52402 4 227 2.65E-62 T 06-07-2017 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 Pfam PF09179 TilS substrate binding domain 242 309 3.3E-19 T 06-07-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS19210 fe07e615460d8292dcd5ec269ffbfbc4 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 301 22.585 T 06-07-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LFZ55_RS01240 468da26d24cc7baa688c01462f8a3653 185 SUPERFAMILY SSF53697 9 181 1.8E-29 T 06-07-2017 LFZ55_RS01240 468da26d24cc7baa688c01462f8a3653 185 Gene3D G3DSA:3.40.50.10490 12 184 7.5E-34 T 06-07-2017 LFZ55_RS01240 468da26d24cc7baa688c01462f8a3653 185 Pfam PF01380 SIS domain 33 153 7.3E-10 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS03160 0f605aba39139d54ffb01657da9899d4 255 SUPERFAMILY SSF63380 5 138 3.05E-14 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS03160 0f605aba39139d54ffb01657da9899d4 255 Gene3D G3DSA:3.40.50.80 136 254 1.0E-20 T 06-07-2017 LFZ55_RS03160 0f605aba39139d54ffb01657da9899d4 255 Pfam PF08021 Siderophore-interacting FAD-binding domain 23 133 7.7E-33 T 06-07-2017 IPR013113 FAD-binding 9, siderophore-interacting LFZ55_RS03160 0f605aba39139d54ffb01657da9899d4 255 Gene3D G3DSA:2.40.30.10 12 132 6.3E-33 T 06-07-2017 LFZ55_RS03160 0f605aba39139d54ffb01657da9899d4 255 Pfam PF04954 Siderophore-interacting protein 143 254 2.5E-19 T 06-07-2017 IPR007037 Siderophore-interacting protein LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 Gene3D G3DSA:2.170.130.10 24 154 3.2E-46 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 SUPERFAMILY SSF56935 29 663 8.37E-131 T 06-07-2017 LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 Gene3D G3DSA:2.40.170.20 155 663 8.1E-115 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 646 663 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 1.7E-33 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS08265 043e3ebd1c4ebb51b38f08cad1926c4b 663 Pfam PF00593 TonB dependent receptor 395 662 1.4E-39 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS03835 4009cdb025f537f60cd7edde2c6feecf 228 Gene3D G3DSA:1.10.10.10 5 75 1.8E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03835 4009cdb025f537f60cd7edde2c6feecf 228 SUPERFAMILY SSF46785 7 78 1.78E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03835 4009cdb025f537f60cd7edde2c6feecf 228 SUPERFAMILY SSF55781 72 220 3.47E-9 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS03835 4009cdb025f537f60cd7edde2c6feecf 228 Gene3D G3DSA:3.30.450.40 76 192 1.2E-8 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS03835 4009cdb025f537f60cd7edde2c6feecf 228 SMART SM00346 6 95 0.0062 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS08370 3ad57332324ce44585a47f4a6fa2ec2d 179 Pfam PF03466 LysR substrate binding domain 2 178 1.4E-27 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS08370 3ad57332324ce44585a47f4a6fa2ec2d 179 Gene3D G3DSA:3.40.190.10 62 146 1.0E-14 T 06-07-2017 LFZ55_RS08370 3ad57332324ce44585a47f4a6fa2ec2d 179 SUPERFAMILY SSF53850 2 178 6.36E-27 T 06-07-2017 LFZ55_RS08370 3ad57332324ce44585a47f4a6fa2ec2d 179 Gene3D G3DSA:3.40.190.10 2 61 3.8E-6 T 06-07-2017 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SMART SM00304 317 369 1.2E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Gene3D G3DSA:1.20.120.160 797 904 1.2E-5 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SUPERFAMILY SSF158472 317 365 8.24E-7 T 06-07-2017 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Gene3D G3DSA:3.30.565.10 449 614 1.0E-39 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SMART SM00448 689 804 7.1E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Gene3D G3DSA:3.40.50.2300 688 796 8.9E-32 T 06-07-2017 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 613 1.9E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SMART SM00387 507 614 1.3E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SUPERFAMILY SSF55874 449 612 2.49E-41 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SMART SM00388 395 460 2.3E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SUPERFAMILY SSF47226 788 902 1.31E-5 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Pfam PF00672 HAMP domain 305 365 3.2E-11 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SUPERFAMILY SSF52172 689 815 1.57E-31 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Pfam PF00072 Response regulator receiver domain 691 803 3.5E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 SUPERFAMILY SSF47384 380 461 7.46E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Gene3D G3DSA:1.10.287.130 387 448 3.2E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 400 460 1.2E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 1.2E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 1.2E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 557 1.2E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS13265 f691f2499d8d04508fd3470978edad7c 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 1.2E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17040 8c89ccd918462ee63b0edf29e96a70dd 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 6.7E-56 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LFZ55_RS17040 8c89ccd918462ee63b0edf29e96a70dd 247 Gene3D G3DSA:3.40.1390.30 108 214 2.6E-29 T 06-07-2017 LFZ55_RS17040 8c89ccd918462ee63b0edf29e96a70dd 247 Gene3D G3DSA:3.40.1390.30 1 107 6.2E-39 T 06-07-2017 LFZ55_RS17040 8c89ccd918462ee63b0edf29e96a70dd 247 SUPERFAMILY SSF102705 1 246 3.01E-83 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LFZ55_RS17040 8c89ccd918462ee63b0edf29e96a70dd 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.4E-81 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.2E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 SMART SM00422 1 70 2.4E-29 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 Gene3D G3DSA:1.10.1660.10 1 55 1.2E-23 T 06-07-2017 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 Gene3D G3DSA:1.10.1660.10 56 131 7.8E-26 T 06-07-2017 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 5.0E-65 T 06-07-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 LFZ55_RS17950 2c6c75c0bdc0434c4dbf57f02938e4fa 138 SUPERFAMILY SSF46955 1 126 1.58E-35 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 SMART SM00382 25 210 4.0E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 Pfam PF00005 ABC transporter 18 162 3.2E-20 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 SUPERFAMILY SSF52540 14 226 7.07E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 Gene3D G3DSA:3.40.50.300 16 223 1.1E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 45.833 T 06-07-2017 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 LFZ55_RS13450 9b62e6130c01c2d0506d6974a71a4361 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 SUPERFAMILY SSF53850 89 294 2.6E-32 T 06-07-2017 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 SUPERFAMILY SSF46785 2 111 2.29E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 Gene3D G3DSA:3.40.190.10 82 196 1.3E-23 T 06-07-2017 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 Pfam PF03466 LysR substrate binding domain 89 293 1.9E-37 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 Gene3D G3DSA:3.40.190.10 197 251 3.6E-9 T 06-07-2017 LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 Gene3D G3DSA:1.10.10.10 2 81 3.0E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23895 ffa56c6c25c0c0ec2b50ed112ae599dd 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 6.4E-235 T 06-07-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 Gene3D G3DSA:3.40.640.10 17 254 3.5E-98 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.828 T 06-07-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 Gene3D G3DSA:3.90.1150.10 255 375 4.2E-52 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 PIRSF PIRSF005572 2 384 3.8E-144 T 06-07-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 SUPERFAMILY SSF53383 5 391 8.74E-116 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS06165 c0a80172001fc22de15a22fce864202e 404 Pfam PF00266 Aminotransferase class-V 5 368 2.2E-89 T 06-07-2017 IPR000192 Aminotransferase class V domain LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 Gene3D G3DSA:2.40.50.40 135 201 1.5E-10 T 06-07-2017 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 Pfam PF04397 LytTr DNA-binding domain 144 237 3.7E-24 T 06-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 SMART SM00850 143 238 1.3E-26 T 06-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 SMART SM00448 2 112 2.0E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 SUPERFAMILY SSF52172 1 123 6.83E-32 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 Gene3D G3DSA:2.20.25.10 214 239 3.2E-7 T 06-07-2017 LFZ55_RS08480 490a8de3a0a5a4f1accc545f469244d4 239 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-32 T 06-07-2017 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF55666 450 548 1.68E-27 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF55666 145 235 7.43E-31 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.0E-20 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.8E-18 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF54791 554 622 9.86E-17 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 PIRSF PIRSF005499 2 711 1.1E-299 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Gene3D G3DSA:1.10.10.400 226 313 7.8E-25 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF00575 S1 RNA binding domain 619 690 2.7E-22 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Gene3D G3DSA:3.30.230.70 4 225 1.6E-83 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Gene3D G3DSA:3.30.230.70 314 542 6.1E-88 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SMART SM00316 620 690 3.6E-27 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF54211 301 492 3.14E-46 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF00013 KH domain 556 613 6.7E-9 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 1.1E-25 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF46915 226 325 2.49E-25 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Gene3D G3DSA:3.30.1370.10 552 619 3.4E-25 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF54211 4 144 1.32E-49 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SMART SM00322 552 617 6.1E-12 T 06-07-2017 IPR004087 K Homology domain GO:0003676 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 5.8E-14 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.7E-4 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.48 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 Gene3D G3DSA:2.40.50.140 620 694 3.2E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02810 9fae9e342bd2c324c32fc0ae1328c24d 711 SUPERFAMILY SSF50249 608 693 6.94E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Gene3D G3DSA:3.40.50.720 1 152 2.8E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Gene3D G3DSA:3.40.50.720 233 376 5.8E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 SUPERFAMILY SSF116726 390 450 1.57E-6 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 SUPERFAMILY SSF51735 1 152 3.29E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Pfam PF02254 TrkA-N domain 235 350 2.6E-26 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Pfam PF02254 TrkA-N domain 3 111 8.4E-30 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Pfam PF02080 TrkA-C domain 390 451 1.3E-9 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 SUPERFAMILY SSF51735 232 376 2.72E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02195 49067df81bd69083a7fc3d2a2482e35f 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07905 c0861ebee50c3859df57b5282f3308b5 216 Gene3D G3DSA:2.60.120.590 14 214 2.1E-58 T 06-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LFZ55_RS07905 c0861ebee50c3859df57b5282f3308b5 216 SUPERFAMILY SSF51197 15 212 1.92E-60 T 06-07-2017 LFZ55_RS07905 c0861ebee50c3859df57b5282f3308b5 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 39 210 2.3E-51 T 06-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LFZ55_RS23380 d87819227d55e66438d34cd6f9ea1728 678 Pfam PF01055 Glycosyl hydrolases family 31 230 664 1.6E-74 T 06-07-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 LFZ55_RS23380 d87819227d55e66438d34cd6f9ea1728 678 SUPERFAMILY SSF74650 63 218 2.54E-20 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS23380 d87819227d55e66438d34cd6f9ea1728 678 SUPERFAMILY SSF51011 585 663 1.01E-21 T 06-07-2017 LFZ55_RS23380 d87819227d55e66438d34cd6f9ea1728 678 SUPERFAMILY SSF51445 234 583 4.92E-51 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Gene3D G3DSA:3.40.605.10 4 206 3.1E-25 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.4E-113 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Pfam PF00171 Aldehyde dehydrogenase family 5 400 2.8E-29 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 SUPERFAMILY SSF53720 6 453 3.01E-86 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Gene3D G3DSA:3.40.50.1970 450 643 6.5E-63 T 06-07-2017 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 PIRSF PIRSF000111 1 866 0.0 T 06-07-2017 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Gene3D G3DSA:1.20.1090.10 644 864 1.4E-68 T 06-07-2017 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 SUPERFAMILY SSF56796 449 868 1.26E-118 T 06-07-2017 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Gene3D G3DSA:3.40.309.10 214 273 8.1E-31 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS11020 e62eb4fb4cb137c255a7b8f71a648cd8 892 Gene3D G3DSA:3.40.309.10 309 404 8.1E-31 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 SUPERFAMILY SSF81442 43 560 1.96E-179 T 06-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 06-07-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 Gene3D G3DSA:1.20.210.10 40 589 7.6E-190 T 06-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 06-07-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.2E-94 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18260 f62be6a1c20051451f1e6df7d5bf7464 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.4E-135 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 SUPERFAMILY SSF46785 9 90 2.39E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 Gene3D G3DSA:1.10.10.10 10 91 6.4E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 SUPERFAMILY SSF53850 96 287 1.99E-29 T 06-07-2017 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 Gene3D G3DSA:3.40.190.10 96 189 2.8E-15 T 06-07-2017 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 Pfam PF03466 LysR substrate binding domain 97 275 1.9E-29 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.1E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 Gene3D G3DSA:3.40.190.10 190 246 4.9E-11 T 06-07-2017 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS07620 4dd2abfa2e22870479e526c2713a6a87 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Pfam PF12833 Helix-turn-helix domain 309 385 1.8E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Gene3D G3DSA:3.40.50.2300 47 110 5.7E-4 T 06-07-2017 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Gene3D G3DSA:1.10.10.60 283 335 1.4E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Gene3D G3DSA:3.40.50.2300 111 277 1.7E-28 T 06-07-2017 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 SUPERFAMILY SSF46689 338 387 3.27E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Gene3D G3DSA:1.10.10.60 338 388 7.6E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 SUPERFAMILY SSF53822 10 298 1.41E-44 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 7.3E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 7.3E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 SMART SM00342 301 384 5.3E-30 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS00895 ed3ae20bca73a625be860a5255d8d8bc 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 5.2E-36 T 06-07-2017 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 06-07-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.6E-42 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.8E-93 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.3E-47 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.3E-47 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.3E-47 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.3E-47 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.3E-47 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 Pfam PF00303 Thymidylate synthase 2 264 6.5E-125 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.326 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 Gene3D G3DSA:3.30.572.10 1 264 1.3E-135 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS04430 f5462ff44f8983c8244cc5d61ac83ace 264 SUPERFAMILY SSF55831 1 264 4.06E-131 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Gene3D G3DSA:1.10.40.30 405 462 1.0E-31 T 06-07-2017 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 7.9E-35 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 7.9E-35 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 7.9E-35 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 7.9E-35 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 2.3E-249 T 06-07-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Gene3D G3DSA:1.20.200.10 139 403 2.2E-106 T 06-07-2017 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.448 T 06-07-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 7.8E-5 T 06-07-2017 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 7.8E-5 T 06-07-2017 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Gene3D G3DSA:1.10.275.10 4 138 3.1E-61 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 SUPERFAMILY SSF48557 5 457 4.08E-159 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Pfam PF00206 Lyase 12 342 4.8E-125 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal LFZ55_RS12860 52fe6587f21deb7758a5b3d39fe06c90 467 Pfam PF10415 Fumarase C C-terminus 408 461 1.3E-23 T 06-07-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS01700 afb351c92c7db796dbe30ab85cd5fb8e 133 SMART SM00363 9 72 1.2E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS01700 afb351c92c7db796dbe30ab85cd5fb8e 133 Gene3D G3DSA:3.10.290.10 7 103 5.3E-39 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS01700 afb351c92c7db796dbe30ab85cd5fb8e 133 PIRSF PIRSF016821 6 133 4.2E-41 T 06-07-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 LFZ55_RS01700 afb351c92c7db796dbe30ab85cd5fb8e 133 SUPERFAMILY SSF55174 7 104 1.57E-31 T 06-07-2017 LFZ55_RS01700 afb351c92c7db796dbe30ab85cd5fb8e 133 Pfam PF01479 S4 domain 9 53 2.8E-13 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 Gene3D G3DSA:1.20.1090.10 160 362 4.1E-66 T 06-07-2017 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 SUPERFAMILY SSF56796 4 358 1.11E-82 T 06-07-2017 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 Gene3D G3DSA:3.40.50.1970 3 158 4.3E-39 T 06-07-2017 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 347 2.3E-63 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS01250 1ab41ada0cb7aa6b5d87767c224013f1 363 PIRSF PIRSF000112 2 360 9.4E-95 T 06-07-2017 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Pfam PF08706 D5 N terminal like 381 467 1.6E-8 T 06-07-2017 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SUPERFAMILY SSF57783 15 92 5.78E-9 T 06-07-2017 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SUPERFAMILY SSF46785 671 769 1.55E-40 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SMART SM00778 30 66 5.3E-21 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SUPERFAMILY SSF52540 431 619 3.54E-19 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SMART SM00493 208 283 1.2E-4 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Pfam PF03288 Poxvirus D5 protein-like 670 769 8.4E-22 T 06-07-2017 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Gene3D G3DSA:3.40.1360.10 206 311 5.2E-8 T 06-07-2017 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Gene3D G3DSA:1.10.10.10 671 769 9.6E-44 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Gene3D G3DSA:3.90.580.10 29 85 6.5E-5 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Pfam PF13362 Toprim domain 210 300 2.3E-11 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Gene3D G3DSA:3.40.50.300 459 646 6.8E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 Pfam PF08273 Zinc-binding domain of primase-helicase 31 66 2.5E-18 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 LFZ55_RS00425 911aea7a9ffe4c9242a9c5d21ddf05f4 777 SMART SM00885 336 463 1.6E-21 T 06-07-2017 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal LFZ55_RS18720 7580d0d99b025c0a95d876e484ef1b9c 441 Gene3D G3DSA:2.60.40.1090 266 441 4.3E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18720 7580d0d99b025c0a95d876e484ef1b9c 441 PIRSF PIRSF029766 4 441 8.4E-185 T 06-07-2017 IPR011228 Uncharacterised conserved protein UCP029766 LFZ55_RS18720 7580d0d99b025c0a95d876e484ef1b9c 441 SUPERFAMILY SSF49401 266 441 1.39E-11 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS18720 7580d0d99b025c0a95d876e484ef1b9c 441 Pfam PF00419 Fimbrial protein 258 441 4.3E-26 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 7.5E-86 T 06-07-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 Gene3D G3DSA:3.40.140.10 31 177 3.1E-43 T 06-07-2017 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 PIRSF PIRSF006334 14 293 3.0E-105 T 06-07-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 Gene3D G3DSA:3.40.140.10 189 292 5.4E-24 T 06-07-2017 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 SUPERFAMILY SSF53927 1 148 1.84E-40 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 139 5.8E-11 T 06-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 5.1E-44 T 06-07-2017 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 SUPERFAMILY SSF53927 152 292 8.03E-43 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS08355 ccac94ecdf4e51df3592fd91d6ed9697 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.535 T 06-07-2017 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 PIRSF PIRSF002158 12 273 4.3E-100 T 06-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.40.50.140 1 114 1.0E-50 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 SMART SM01382 124 251 5.1E-89 T 06-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.3E-131 T 06-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50104 127 269 1.87E-59 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.1E-55 T 06-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 06-07-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 SMART SM01383 42 118 1.9E-48 T 06-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.056 T 06-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:4.10.950.10 196 272 1.8E-34 T 06-07-2017 IPR014726 Ribosomal protein L2, domain 3 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50249 3 125 5.48E-50 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 06-07-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02055 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.30.30.30 119 195 4.8E-34 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 LFZ55_RS10890 4111370a31016ece2043d3b3124da152 269 Pfam PF13371 Tetratricopeptide repeat 187 259 7.9E-27 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS10890 4111370a31016ece2043d3b3124da152 269 Gene3D G3DSA:1.25.40.10 174 249 1.8E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS10890 4111370a31016ece2043d3b3124da152 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 2.2E-41 T 06-07-2017 IPR032698 Protein SirB1, N-terminal LFZ55_RS05000 1a3d84bfc6730cf15786944a86551ed7 681 SUPERFAMILY SSF140746 23 262 1.57E-106 T 06-07-2017 IPR023225 Salmonella invasion protein A, chaperone-binding LFZ55_RS05000 1a3d84bfc6730cf15786944a86551ed7 681 Pfam PF09052 Salmonella invasion protein A 1 678 8.6E-270 T 06-07-2017 IPR015138 Salmonella invasion protein A LFZ55_RS05000 1a3d84bfc6730cf15786944a86551ed7 681 SUPERFAMILY SSF101312 511 653 1.24E-81 T 06-07-2017 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain LFZ55_RS22315 a5a5e3d25513e4252db412eef069d305 136 Pfam PF03788 LrgA family 31 122 8.5E-25 T 06-07-2017 IPR005538 LrgA/CidA family GO:0016021 LFZ55_RS10955 5eacdcfbcd05bf6a21c03316a08aebdd 225 SUPERFAMILY SSF103501 1 224 2.88E-70 T 06-07-2017 IPR023234 NarG-like domain LFZ55_RS10955 5eacdcfbcd05bf6a21c03316a08aebdd 225 Gene3D G3DSA:1.20.950.20 2 216 3.9E-72 T 06-07-2017 LFZ55_RS10955 5eacdcfbcd05bf6a21c03316a08aebdd 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 5.4E-80 T 06-07-2017 IPR023234 NarG-like domain LFZ55_RS10955 5eacdcfbcd05bf6a21c03316a08aebdd 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 5.6E-126 T 06-07-2017 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 281 373 1.7E-22 T 06-07-2017 IPR021868 Alpha-2-macroglobulin MG1 domain LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 SMART SM01359 750 898 1.4E-31 T 06-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 PIRSF PIRSF038980 1 1644 0.0 T 06-07-2017 IPR026284 Alpha-2-macroglobulin domain protein, bacteria LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 SMART SM01360 960 1049 3.2E-17 T 06-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 Pfam PF01835 MG2 domain 380 471 7.2E-20 T 06-07-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 Gene3D G3DSA:1.50.10.20 1168 1425 1.6E-35 T 06-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 SUPERFAMILY SSF48239 1169 1425 1.86E-42 T 06-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 Pfam PF00207 Alpha-2-macroglobulin family 968 1048 4.6E-5 T 06-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 LFZ55_RS06220 c337e628830bcc73662b211bdb393278 1644 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 751 898 4.1E-11 T 06-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LFZ55_RS04210 bff0eb21f8fed5752dc3e356450fc4bf 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 159 7.9E-44 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04210 bff0eb21f8fed5752dc3e356450fc4bf 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.5E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04210 bff0eb21f8fed5752dc3e356450fc4bf 163 SUPERFAMILY SSF141452 2 160 9.42E-40 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04210 bff0eb21f8fed5752dc3e356450fc4bf 163 Gene3D G3DSA:2.30.110.20 1 158 8.5E-31 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 Gene3D G3DSA:2.40.170.20 190 724 6.1E-130 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 SUPERFAMILY SSF56935 37 724 1.56E-116 T 06-07-2017 LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 Gene3D G3DSA:2.170.130.10 53 181 1.9E-32 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 707 724 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 724 1.9E-162 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 4.8E-13 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS14245 87a8f6b3355a21b858914a249921fa6c 724 Pfam PF00593 TonB dependent receptor 488 723 2.8E-30 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS24845 c84b5871a88832a042ed7a37069f2923 97 TIGRFAM TIGR02741 TraQ: type-F conjugative transfer system pilin chaperone TraQ 1 97 7.5E-52 T 06-07-2017 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ LFZ55_RS24845 c84b5871a88832a042ed7a37069f2923 97 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 1 97 5.8E-65 T 06-07-2017 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ LFZ55_RS24845 c84b5871a88832a042ed7a37069f2923 97 PIRSF PIRSF003265 1 97 1.6E-59 T 06-07-2017 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 SMART SM00420 8 57 5.1E-11 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 Gene3D G3DSA:1.10.10.10 3 43 3.2E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 58 6.8E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 Pfam PF00455 DeoR C terminal sensor domain 76 233 5.0E-44 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 SUPERFAMILY SSF100950 74 235 7.64E-30 T 06-07-2017 LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 Gene3D G3DSA:3.40.50.1360 77 214 7.0E-10 T 06-07-2017 LFZ55_RS16330 e6fbc8868309b5ae6ff515c146c10fea 252 SMART SM01134 73 234 1.2E-55 T 06-07-2017 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 5.6E-139 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 SUPERFAMILY SSF103263 4 352 7.98E-148 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 Gene3D G3DSA:3.60.150.10 9 352 1.1E-159 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 PIRSF PIRSF001456 3 359 2.6E-141 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.655 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS07340 e240bb80900a073105d31e757c010e33 361 Pfam PF01264 Chorismate synthase 10 345 1.6E-142 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LFZ55_RS14310 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS14310 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS14310 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS14310 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LFZ55_RS23995 f6ecc73b87e2e3a19a26b94c914c0e61 296 Gene3D G3DSA:3.40.50.2300 145 295 7.1E-55 T 06-07-2017 LFZ55_RS23995 f6ecc73b87e2e3a19a26b94c914c0e61 296 Gene3D G3DSA:3.40.50.2300 27 144 8.3E-44 T 06-07-2017 LFZ55_RS23995 f6ecc73b87e2e3a19a26b94c914c0e61 296 Pfam PF13407 Periplasmic binding protein domain 29 281 1.1E-58 T 06-07-2017 IPR025997 Periplasmic binding protein LFZ55_RS23995 f6ecc73b87e2e3a19a26b94c914c0e61 296 SUPERFAMILY SSF53822 26 295 1.94E-88 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 SMART SM00928 336 381 4.3E-22 T 06-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 06-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 06-07-2017 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.8E-26 T 06-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 06-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 3.7E-204 T 06-07-2017 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 4.1E-50 T 06-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 SUPERFAMILY SSF142019 16 246 1.02E-85 T 06-07-2017 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 SUPERFAMILY SSF140490 334 429 1.01E-31 T 06-07-2017 LFZ55_RS07650 1e25fdad1b1031ff2ad80b31931975bb 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 06-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 SUPERFAMILY SSF52540 334 570 3.78E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 Gene3D G3DSA:3.40.50.300 338 568 1.1E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 Gene3D G3DSA:1.20.1560.10 8 322 2.8E-30 T 06-07-2017 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 3.1E-190 T 06-07-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 SMART SM00382 365 549 3.3E-17 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 SUPERFAMILY SSF90123 8 323 1.44E-41 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 Pfam PF00664 ABC transporter transmembrane region 82 287 7.9E-9 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15860 edae2c950a4cd39b9e53c2da3fec2866 573 Pfam PF00005 ABC transporter 356 502 1.3E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 SUPERFAMILY SSF47781 17 84 6.3E-9 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 221 1.4E-91 T 06-07-2017 IPR001405 RadC protein LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 54.018 T 06-07-2017 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 Gene3D G3DSA:3.40.140.10 98 221 4.4E-50 T 06-07-2017 LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 Pfam PF04002 RadC-like JAB domain 102 219 7.6E-45 T 06-07-2017 IPR025657 RadC-like JAB domain LFZ55_RS00595 f4c9bed4b2afbebb4b12bb2f164b4625 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 06-07-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site LFZ55_RS23320 43789c38189f15543dc82e96f2e45e3a 148 SMART SM00530 92 146 2.0E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS23320 43789c38189f15543dc82e96f2e45e3a 148 Gene3D G3DSA:1.10.260.40 84 147 3.9E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23320 43789c38189f15543dc82e96f2e45e3a 148 SUPERFAMILY SSF47413 88 147 2.59E-7 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS23320 43789c38189f15543dc82e96f2e45e3a 148 Pfam PF01381 Helix-turn-helix 93 144 2.4E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.73 T 06-07-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 3.0E-30 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 SUPERFAMILY SSF54893 2 100 2.35E-35 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 Gene3D G3DSA:2.30.30.20 101 152 8.8E-24 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-47 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 2.6E-18 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 Gene3D G3DSA:3.30.70.140 2 98 1.2E-37 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 4.4E-71 T 06-07-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 LFZ55_RS21305 3f685111ab9b75e536c4bf1be4a5718b 153 SUPERFAMILY SSF57825 101 151 1.57E-15 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 SUPERFAMILY SSF116726 319 390 7.06E-16 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Pfam PF03600 Citrate transporter 428 606 4.3E-18 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Pfam PF03600 Citrate transporter 16 197 4.1E-35 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Gene3D G3DSA:3.30.70.1450 320 393 1.8E-20 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Gene3D G3DSA:3.30.70.1450 230 309 1.5E-16 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 556 572 - T 06-07-2017 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 SUPERFAMILY SSF116726 229 287 3.14E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Pfam PF02080 TrkA-C domain 324 390 3.8E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS07600 302bf5ce6f4c5d4534296e1835a3eb97 608 Pfam PF02080 TrkA-C domain 229 301 9.3E-13 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS22480 89ac5dc307317dda0a09849fa56d6685 436 Pfam PF13729 F plasmid transfer operon, TraF, protein 51 354 4.0E-86 T 06-07-2017 IPR032811 Putative conjugal transfer protein TraF-related LFZ55_RS22480 89ac5dc307317dda0a09849fa56d6685 436 Gene3D G3DSA:2.40.160.60 31 181 7.9E-8 T 06-07-2017 LFZ55_RS22480 89ac5dc307317dda0a09849fa56d6685 436 Gene3D G3DSA:2.40.160.60 249 417 7.9E-8 T 06-07-2017 LFZ55_RS22480 89ac5dc307317dda0a09849fa56d6685 436 SUPERFAMILY SSF56935 254 419 3.48E-5 T 06-07-2017 LFZ55_RS22480 89ac5dc307317dda0a09849fa56d6685 436 SUPERFAMILY SSF56935 31 92 3.48E-5 T 06-07-2017 LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 SMART SM00729 23 247 9.5E-40 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.9E-138 T 06-07-2017 IPR005911 Protein YhcC-like GO:0051536 LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 Pfam PF16199 Radical_SAM C-terminal domain 208 287 2.6E-17 T 06-07-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 Gene3D G3DSA:3.80.30.20 22 229 2.3E-31 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 Pfam PF04055 Radical SAM superfamily 43 200 4.4E-15 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS02575 63eefe82c00240278ba95319cd64726b 309 SUPERFAMILY SSF102114 14 253 3.53E-43 T 06-07-2017 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 06-07-2017 IPR019926 Ribosomal protein L3, conserved site LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.1E-91 T 06-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 SUPERFAMILY SSF50447 1 208 2.65E-80 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 Pfam PF00297 Ribosomal protein L3 34 182 2.3E-14 T 06-07-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 Gene3D G3DSA:4.10.960.10 77 157 1.4E-35 T 06-07-2017 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.351 T 06-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 Gene3D G3DSA:2.40.30.10 158 196 2.0E-8 T 06-07-2017 LFZ55_RS02040 afab8419b2c85615f5b8de38297a3eb3 209 Gene3D G3DSA:2.40.30.10 3 32 2.0E-8 T 06-07-2017 LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 Gene3D G3DSA:3.40.50.300 5 209 3.8E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 Pfam PF02223 Thymidylate kinase 8 200 1.4E-58 T 06-07-2017 LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.694 T 06-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 SUPERFAMILY SSF52540 3 209 2.1E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 200 8.9E-67 T 06-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LFZ55_RS14265 a01ecd16d8c598a59fa27edd2c4c6251 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 06-07-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LFZ55_RS11915 e71ebbbce817242e802324e75c0c8ae0 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 1.1E-18 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS11915 e71ebbbce817242e802324e75c0c8ae0 179 SUPERFAMILY SSF55729 7 175 1.06E-44 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS11915 e71ebbbce817242e802324e75c0c8ae0 179 Gene3D G3DSA:3.40.630.30 9 175 1.4E-43 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 Pfam PF13242 HAD-hyrolase-like 109 179 5.0E-12 T 06-07-2017 LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 Gene3D G3DSA:3.40.50.1000 3 183 2.8E-62 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 1.1E-37 T 06-07-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 2.2E-38 T 06-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 PIRSF PIRSF004682 1 188 2.8E-66 T 06-07-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 SUPERFAMILY SSF56784 5 184 1.9E-52 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS19150 2031b7fc5aa577cac8c1f1cca0429659 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 1.8E-98 T 06-07-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LFZ55_RS24490 a82c60a4ae8159fa4c68ade5ba590cba 626 SUPERFAMILY SSF52402 45 249 4.5E-12 T 06-07-2017 LFZ55_RS24490 a82c60a4ae8159fa4c68ade5ba590cba 626 Gene3D G3DSA:3.40.50.620 38 249 2.6E-13 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS24490 a82c60a4ae8159fa4c68ade5ba590cba 626 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 64 248 2.0E-6 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 Pfam PF01750 Hydrogenase maturation protease 20 147 5.4E-37 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 SUPERFAMILY SSF53163 1 158 3.4E-46 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 9.6E-55 T 06-07-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 6.6E-46 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.6E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.6E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 1.6E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 1.6E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.6E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS03505 2399f17b7a30efb3e18ca503fb125ac4 164 Gene3D G3DSA:3.40.50.1450 1 158 9.8E-53 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS03735 bc8d8e0a3c8d766345b3ba308ed496e8 419 Gene3D G3DSA:1.10.443.10 211 384 1.5E-17 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS03735 bc8d8e0a3c8d766345b3ba308ed496e8 419 Gene3D G3DSA:1.10.150.130 96 190 6.0E-15 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS03735 bc8d8e0a3c8d766345b3ba308ed496e8 419 Pfam PF00589 Phage integrase family 212 382 4.7E-16 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS03735 bc8d8e0a3c8d766345b3ba308ed496e8 419 Pfam PF13356 Domain of unknown function (DUF4102) 2 86 6.7E-18 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS03735 bc8d8e0a3c8d766345b3ba308ed496e8 419 SUPERFAMILY SSF56349 96 388 2.85E-46 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.8E-61 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 Gene3D G3DSA:3.40.50.300 3 209 1.9E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 Pfam PF13500 AAA domain 3 207 2.0E-40 T 06-07-2017 LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 SUPERFAMILY SSF52540 3 208 3.41E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 210 29.733 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS16620 a70b28851ac1a1de84cb59461ea89170 228 PIRSF PIRSF006755 1 227 5.9E-81 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 82 6.2E-15 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Gene3D G3DSA:3.30.413.10 110 163 9.2E-30 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Gene3D G3DSA:3.30.413.10 234 304 9.2E-30 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Pfam PF13187 4Fe-4S dicluster domain 179 224 2.7E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 151 167 - T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 SUPERFAMILY SSF54862 153 232 4.61E-17 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Gene3D G3DSA:3.30.70.20 164 185 1.3E-4 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Gene3D G3DSA:3.30.70.20 186 233 4.0E-13 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 SUPERFAMILY SSF56014 232 327 1.46E-29 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 SUPERFAMILY SSF56014 110 173 1.46E-29 T 06-07-2017 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 110 303 4.6E-16 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 4 321 1.3E-163 T 06-07-2017 IPR014261 Sulphite reductase, subunit C LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 SUPERFAMILY SSF55124 18 83 3.6E-16 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 PRINTS PR00397 Sirohaem Fe-binding site signature 151 169 5.2E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS06135 9bad21f7bdbc69531edcb4d99ee97fad 337 PRINTS PR00397 Sirohaem Fe-binding site signature 110 128 5.2E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 106 185 3.28E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 342 440 4.1E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 19 87 1.3E-4 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 190 260 1.4E-27 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 275 347 2.2E-27 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 449 520 3.2E-21 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 362 434 3.4E-21 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SMART SM00316 103 171 2.0E-8 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PIRSF PIRSF002111 1 534 1.4E-220 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.5E-99 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 102 172 5.5E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 448 521 1.3E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 1 112 8.17E-19 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.1E-240 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 360 439 6.8E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 104 171 8.1E-10 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 361 434 9.3E-22 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 449 520 2.7E-17 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 190 260 1.8E-21 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Pfam PF00575 S1 RNA binding domain 20 78 1.6E-6 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 189 277 5.59E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 255 367 1.0E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 SUPERFAMILY SSF50249 429 535 8.58E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 279 359 3.9E-30 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 192 278 9.8E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15730 f242fbb37f342793e1eb84a6f08f8d83 557 Gene3D G3DSA:2.40.50.140 21 101 1.4E-10 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 Gene3D G3DSA:3.40.190.10 109 201 7.0E-29 T 06-07-2017 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 SUPERFAMILY SSF53850 1 242 2.22E-72 T 06-07-2017 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 1.4E-88 T 06-07-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 Gene3D G3DSA:3.40.190.10 203 242 8.3E-44 T 06-07-2017 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 Gene3D G3DSA:3.40.190.10 20 108 8.3E-44 T 06-07-2017 LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.4E-69 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS16015 095a965478fa93494f52d06ea34e528f 243 SMART SM00062 22 242 1.0E-85 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 SUPERFAMILY SSF48179 284 488 4.08E-67 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 465 3.3E-95 T 06-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 SUPERFAMILY SSF51735 5 282 4.72E-95 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 219 231 - T 06-07-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 Gene3D G3DSA:1.10.1040.10 284 488 3.5E-76 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 25 189 2.2E-51 T 06-07-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 2.6E-20 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 2.6E-20 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 PRINTS PR00084 Mannitol dehydrogenase signature 26 36 2.6E-20 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 2.6E-20 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS03555 686c590d8fa594abea3532cf71e26bb4 490 Gene3D G3DSA:3.40.50.720 3 282 5.6E-111 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14980 f732c8dc7d72ed6731cd1a2d25b00894 264 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 240 1.1E-65 T 06-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LFZ55_RS14980 f732c8dc7d72ed6731cd1a2d25b00894 264 Gene3D G3DSA:3.20.20.60 1 250 1.5E-82 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS14980 f732c8dc7d72ed6731cd1a2d25b00894 264 Hamap MF_01292 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase [hpcH]. 1 264 70.118 T 06-07-2017 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 LFZ55_RS14980 f732c8dc7d72ed6731cd1a2d25b00894 264 SUPERFAMILY SSF51621 2 250 2.41E-83 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS14980 f732c8dc7d72ed6731cd1a2d25b00894 264 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 3 250 6.9E-130 T 06-07-2017 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 Pfam PF12710 haloacid dehalogenase-like hydrolase 89 257 1.3E-16 T 06-07-2017 LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 89 258 1.1E-29 T 06-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 Gene3D G3DSA:1.10.150.210 98 149 3.5E-21 T 06-07-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 86 287 1.6E-62 T 06-07-2017 LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 SUPERFAMILY SSF56784 87 293 3.12E-42 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS08275 e4c60464a5a1bb3c86edaef77745bb51 295 Gene3D G3DSA:3.40.50.1000 150 282 2.5E-31 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 SMART SM00014 77 227 3.8E-38 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 Gene3D G3DSA:1.20.144.10 156 246 1.4E-27 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 Gene3D G3DSA:1.20.144.10 36 120 1.4E-27 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 Pfam PF01569 PAP2 superfamily 81 232 1.3E-32 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 SUPERFAMILY SSF48317 145 233 6.54E-31 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11235 5cdd2479deaadcffc6f8728026ee0b80 254 SUPERFAMILY SSF48317 17 113 6.54E-31 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 2.7E-20 T 06-07-2017 IPR031576 Flagellar motor switch protein FliN, N-terminal LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 Gene3D G3DSA:2.30.330.10 51 136 2.8E-39 T 06-07-2017 LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 06-07-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.3E-26 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS09540 b1276cd0e5b0d41b0e432e2d9fea30fb 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS12240 d2e77b624cef910fadaf7a06667f9f17 400 SUPERFAMILY SSF53383 2 388 2.58E-93 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS12240 d2e77b624cef910fadaf7a06667f9f17 400 Gene3D G3DSA:3.90.1150.10 256 388 5.8E-37 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS12240 d2e77b624cef910fadaf7a06667f9f17 400 Gene3D G3DSA:3.40.640.10 44 255 5.1E-50 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS12240 d2e77b624cef910fadaf7a06667f9f17 400 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 387 1.0E-115 T 06-07-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LFZ55_RS12240 d2e77b624cef910fadaf7a06667f9f17 400 Pfam PF00155 Aminotransferase class I and II 38 383 1.1E-35 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS08215 5a54c74e2eaae9e7bbce821d722e59c4 227 Pfam PF13807 G-rich domain on putative tyrosine kinase 147 206 1.6E-9 T 06-07-2017 IPR032807 Tyrosine kinase, G-rich domain LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 303 1.1E-100 T 06-07-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 Pfam PF12706 Beta-lactamase superfamily domain 36 151 4.3E-9 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 Pfam PF12706 Beta-lactamase superfamily domain 202 271 6.1E-8 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 305 3.5E-208 T 06-07-2017 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 SUPERFAMILY SSF56281 1 304 4.06E-85 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 Gene3D G3DSA:3.60.15.10 196 305 2.0E-83 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 Gene3D G3DSA:3.60.15.10 1 157 2.0E-83 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS07700 403be8c8cc340e21ed02eb7d7c19944e 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 38.899 T 06-07-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LFZ55_RS24790 76b0afb8c6e88241c0d04d097a22bf22 187 SUPERFAMILY SSF48657 33 182 3.14E-43 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS24790 76b0afb8c6e88241c0d04d097a22bf22 187 Pfam PF12602 Fertility inhibition protein N terminal 1 62 3.7E-35 T 06-07-2017 IPR021065 Fertility inhibition protein FinO, N-terminal LFZ55_RS24790 76b0afb8c6e88241c0d04d097a22bf22 187 Gene3D G3DSA:1.10.1710.10 33 183 2.7E-54 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS24790 76b0afb8c6e88241c0d04d097a22bf22 187 Pfam PF04352 ProQ/FINO family 71 177 1.2E-22 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS24790 76b0afb8c6e88241c0d04d097a22bf22 187 SMART SM00945 68 182 1.1E-24 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 7.8E-157 T 06-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Gene3D G3DSA:3.40.50.620 224 399 4.8E-59 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.0E-44 T 06-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Gene3D G3DSA:3.40.50.880 4 223 1.5E-61 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 SUPERFAMILY SSF54810 405 525 1.44E-51 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.5E-84 T 06-07-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.681 T 06-07-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 SUPERFAMILY SSF52317 5 204 2.37E-59 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 SUPERFAMILY SSF52402 197 420 1.26E-59 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 06-07-2017 LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Pfam PF02540 NAD synthase 223 258 1.1E-6 T 06-07-2017 IPR022310 NAD/GMP synthase LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 4.1E-41 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS06320 d697d6a3b205807c1104ec7cc57101dd 525 Gene3D G3DSA:3.30.300.10 401 525 1.0E-53 T 06-07-2017 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 4.6E-156 T 06-07-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.275 T 06-07-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 SUPERFAMILY SSF53448 20 294 2.14E-77 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 Pfam PF00483 Nucleotidyl transferase 22 291 1.5E-70 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 06-07-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 SUPERFAMILY SSF51161 312 411 7.21E-19 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 Gene3D G3DSA:3.90.550.10 22 301 6.5E-79 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 Gene3D G3DSA:3.90.550.10 344 386 6.5E-79 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 06-07-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LFZ55_RS01570 f90004624e79e7fe5f162ebc15b89fcb 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 06-07-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 381 408 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 151 170 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 25 47 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 118 146 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 54 78 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 353 375 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 170 193 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 198 219 2.1E-98 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 Pfam PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) 48 397 2.0E-137 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS04990 16f4b13628f4e92ec7f4de4cb38b7524 409 TIGRFAM TIGR02101 IpaC_SipC: type III secretion target, IpaC/SipC family 70 404 3.8E-122 T 06-07-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 Pfam PF00696 Amino acid kinase family 10 219 9.2E-28 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 Gene3D G3DSA:3.40.1160.10 3 240 1.9E-85 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 SUPERFAMILY SSF53633 7 240 5.11E-72 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 PIRSF PIRSF005650 4 241 3.3E-89 T 06-07-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.443 T 06-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 LFZ55_RS19305 66c90208742a4295639093d02803ec72 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.2E-103 T 06-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.8E-49 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Pfam PF03129 Anticodon binding domain 475 567 1.3E-21 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 PIRSF PIRSF001535 1 572 1.5E-277 T 06-07-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Gene3D G3DSA:3.40.50.800 472 570 1.1E-31 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 SUPERFAMILY SSF55681 407 478 3.45E-108 T 06-07-2017 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 SUPERFAMILY SSF55681 10 237 3.45E-108 T 06-07-2017 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.185 T 06-07-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 3.9E-26 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 SUPERFAMILY SSF52954 463 571 1.1E-33 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.9E-278 T 06-07-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Gene3D G3DSA:3.90.960.10 248 388 6.1E-33 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Gene3D G3DSA:3.30.930.10 389 471 1.6E-107 T 06-07-2017 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 Gene3D G3DSA:3.30.930.10 10 234 1.6E-107 T 06-07-2017 LFZ55_RS19180 bf6307a6b240011c5bb113d024732077 572 SUPERFAMILY SSF55826 218 390 3.14E-32 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 Gene3D G3DSA:3.30.70.60 1 103 4.3E-42 T 06-07-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 5.7E-39 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.693 T 06-07-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 Pfam PF01250 Ribosomal protein S6 3 91 3.3E-28 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 SUPERFAMILY SSF54995 1 103 1.22E-37 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21585 7e12dc35a6dce7bbabb953c930d3613a 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 06-07-2017 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 SMART SM00904 183 307 8.0E-62 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 SUPERFAMILY SSF82114 174 307 1.94E-43 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.2E-117 T 06-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 Pfam PF06574 FAD synthetase 12 167 2.8E-57 T 06-07-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 Gene3D G3DSA:2.40.30.30 189 307 4.6E-39 T 06-07-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 PIRSF PIRSF004491 1 311 5.1E-103 T 06-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 Pfam PF01687 Riboflavin kinase 184 306 3.3E-37 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 Gene3D G3DSA:3.40.50.620 1 187 1.6E-67 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20110 5f0b695de0fa44ff4b895a02dc8e88b8 312 SUPERFAMILY SSF52374 15 175 2.79E-33 T 06-07-2017 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.667 T 06-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.7E-184 T 06-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 5.4E-130 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 SUPERFAMILY SSF55205 1 418 1.96E-146 T 06-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 Gene3D G3DSA:3.65.10.10 220 416 9.8E-64 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS02685 947771cf5aaae8a4326ea14599e4757d 419 Gene3D G3DSA:3.65.10.10 21 219 6.4E-68 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 SMART SM00382 53 242 1.3E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 SUPERFAMILY SSF54631 276 393 4.17E-13 T 06-07-2017 LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 5.4E-193 T 06-07-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 SUPERFAMILY SSF52540 43 270 5.15E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 Gene3D G3DSA:3.10.580.10 272 395 1.2E-23 T 06-07-2017 LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 Gene3D G3DSA:3.40.50.300 41 264 2.0E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 Pfam PF00571 CBS domain 345 393 4.1E-7 T 06-07-2017 IPR000644 CBS domain LFZ55_RS05365 d7450de4256849113ec9d3aa77f1b690 400 Pfam PF00005 ABC transporter 45 192 4.3E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 Pfam PF00672 HAMP domain 344 412 1.4E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 SMART SM00304 364 416 8.6E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 512 3.5E-8 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 SUPERFAMILY SSF47384 434 511 6.67E-8 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 Gene3D G3DSA:3.30.565.10 519 663 8.1E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 SUPERFAMILY SSF55874 509 661 8.64E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 660 2.1E-14 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 SMART SM00388 447 515 2.2E-6 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07275 ce5ac1ba6c8acccebd0f97bb7a5eb2b1 668 SMART SM00387 557 663 1.5E-21 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 SUPERFAMILY SSF47616 76 215 4.76E-49 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 SUPERFAMILY SSF52833 1 78 1.05E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 Gene3D G3DSA:1.20.1050.10 90 215 2.9E-51 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 3.6E-50 T 06-07-2017 IPR007494 Glutaredoxin 2, C-terminal LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 1.3E-11 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 5.8E-99 T 06-07-2017 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 06-07-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 LFZ55_RS14445 33ed47bbc6a2bd7a8c39cbc36f73d411 215 Gene3D G3DSA:3.40.30.10 8 83 6.3E-31 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS12100 530ce9ac7cd254db64fba770a9d9760c 77 SUPERFAMILY SSF55331 2 75 1.37E-17 T 06-07-2017 IPR014347 Tautomerase/MIF superfamily LFZ55_RS12100 530ce9ac7cd254db64fba770a9d9760c 77 PIRSF PIRSF037799 1 77 1.4E-29 T 06-07-2017 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 LFZ55_RS12100 530ce9ac7cd254db64fba770a9d9760c 77 Gene3D G3DSA:3.30.429.20 1 53 1.5E-11 T 06-07-2017 LFZ55_RS12100 530ce9ac7cd254db64fba770a9d9760c 77 Pfam PF01361 Tautomerase enzyme 2 54 3.6E-14 T 06-07-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 LFZ55_RS12100 530ce9ac7cd254db64fba770a9d9760c 77 Hamap MF_00718 Tautomerase PptA [pptA]. 1 75 29.2 T 06-07-2017 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.5E-39 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 SUPERFAMILY SSF89360 8 103 2.75E-31 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 Gene3D G3DSA:2.60.300.12 9 104 8.6E-32 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.8E-20 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS19380 70beb9e0b2365d08e6e9f15c76ec6d6f 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.154 T 06-07-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-40 T 06-07-2017 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 Pfam PF00312 Ribosomal protein S15 9 88 1.4E-37 T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.0E-40 T 06-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.132 T 06-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 SMART SM01387 8 88 6.6E-52 T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 SUPERFAMILY SSF47060 3 89 5.3E-35 T 06-07-2017 IPR009068 S15/NS1, RNA-binding LFZ55_RS02805 f0c95edb037e280ed1c68ea87612755d 89 Gene3D G3DSA:1.10.287.10 3 89 4.2E-39 T 06-07-2017 IPR009068 S15/NS1, RNA-binding LFZ55_RS16685 21f810db388bf46c205f765a0a8eb261 331 Gene3D G3DSA:2.130.10.10 2 328 2.3E-81 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS16685 21f810db388bf46c205f765a0a8eb261 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.1 T 06-07-2017 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 LFZ55_RS16685 21f810db388bf46c205f765a0a8eb261 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 2.9E-88 T 06-07-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 LFZ55_RS16685 21f810db388bf46c205f765a0a8eb261 331 SUPERFAMILY SSF50974 5 73 4.18E-7 T 06-07-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 LFZ55_RS16685 21f810db388bf46c205f765a0a8eb261 331 SUPERFAMILY SSF50974 68 330 4.97E-53 T 06-07-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 06-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SMART SM00533 286 591 2.9E-107 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SMART SM00534 607 794 1.6E-123 T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Gene3D G3DSA:1.10.1420.10 319 477 1.2E-56 T 06-07-2017 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Pfam PF01624 MutS domain I 11 122 4.9E-43 T 06-07-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SUPERFAMILY SSF53150 117 269 2.62E-43 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Gene3D G3DSA:3.40.50.300 567 797 1.0E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Gene3D G3DSA:3.30.420.110 129 258 5.1E-43 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SUPERFAMILY SSF52540 567 798 7.09E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Pfam PF05192 MutS domain III 272 559 5.9E-40 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Pfam PF05188 MutS domain II 131 256 1.3E-33 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Gene3D G3DSA:3.40.1170.10 6 123 5.6E-52 T 06-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SUPERFAMILY SSF55271 9 116 1.83E-42 T 06-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.388 T 06-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 SUPERFAMILY SSF48334 270 566 3.92E-90 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Pfam PF05190 MutS family domain IV 428 517 2.9E-28 T 06-07-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 LFZ55_RS04905 54e8ad0b069f2012b9680852012ab85a 853 Pfam PF00488 MutS domain V 610 797 2.5E-88 T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 SUPERFAMILY SSF140570 119 281 8.5E-78 T 06-07-2017 IPR033440 Chromosome partition protein MukF, middle domain LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 Pfam PF03882 MukF winged-helix domain 3 117 8.1E-58 T 06-07-2017 IPR033439 Chromosome partition protein MukF, winged-helix domain LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 PIRSF PIRSF018282 1 440 1.6E-245 T 06-07-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.747 T 06-07-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 Gene3D G3DSA:1.10.10.10 24 118 4.7E-49 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 Pfam PF17192 MukF middle domain 121 281 1.3E-84 T 06-07-2017 IPR033440 Chromosome partition protein MukF, middle domain LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 SUPERFAMILY SSF46785 8 118 1.83E-48 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15670 80ade8f17894ff76a126bd6bbdce0c0e 440 Pfam PF17193 MukF C-terminal domain 283 440 5.3E-81 T 06-07-2017 IPR033441 Chromosome partition protein MukF, C-terminal domain LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Pfam PF13438 Domain of unknown function (DUF4113) 368 416 2.6E-18 T 06-07-2017 IPR025188 Domain of unknown function DUF4113 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 SUPERFAMILY SSF100879 242 343 3.66E-6 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 350 4.5E-12 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Gene3D G3DSA:3.30.1490.100 247 349 7.1E-6 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Gene3D G3DSA:1.10.150.20 170 239 2.3E-21 T 06-07-2017 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 SUPERFAMILY SSF56672 1 236 2.85E-62 T 06-07-2017 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Gene3D G3DSA:3.30.70.270 66 155 1.0E-20 T 06-07-2017 LFZ55_RS24305 d3524d49a7e956f66e3303393a53af6a 419 Pfam PF00817 impB/mucB/samB family 5 150 1.1E-32 T 06-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 Gene3D G3DSA:2.60.120.280 8 164 1.2E-49 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 Gene3D G3DSA:1.10.10.60 232 278 1.7E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 SUPERFAMILY SSF51215 8 162 9.55E-40 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 SMART SM00342 194 277 1.9E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 SUPERFAMILY SSF46689 176 227 9.86E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 Pfam PF02311 AraC-like ligand binding domain 23 160 4.1E-26 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 Pfam PF12833 Helix-turn-helix domain 200 278 4.4E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 SUPERFAMILY SSF46689 231 279 2.78E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS19880 f38ba24bb22d6f6ac93025d46dd3fbd8 281 Gene3D G3DSA:1.10.10.60 173 231 9.2E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS24280 e4b25651902fcd4132c1e31962259fe9 284 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 52 266 5.6E-60 T 06-07-2017 IPR031618 Putative type IV secretory system protein LFZ55_RS19240 6b7664c8e10a8b7c49d264e03d713e65 198 SUPERFAMILY SSF53098 3 195 3.49E-70 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS19240 6b7664c8e10a8b7c49d264e03d713e65 198 Pfam PF01351 Ribonuclease HII 13 189 4.3E-38 T 06-07-2017 IPR024567 Ribonuclease HII/HIII domain LFZ55_RS19240 6b7664c8e10a8b7c49d264e03d713e65 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.671 T 06-07-2017 IPR022898 Ribonuclease HII GO:0004523 LFZ55_RS19240 6b7664c8e10a8b7c49d264e03d713e65 198 Gene3D G3DSA:3.30.420.10 11 151 1.8E-48 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 25 240 2.4E-105 T 06-07-2017 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 Gene3D G3DSA:3.40.50.2300 22 140 5.6E-39 T 06-07-2017 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 240 1.3E-26 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 Gene3D G3DSA:1.10.10.10 146 244 9.8E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 SUPERFAMILY SSF46894 146 241 3.4E-28 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 SMART SM00862 165 240 1.7E-26 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 SUPERFAMILY SSF52172 21 145 2.7E-40 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 SMART SM00448 23 133 3.4E-44 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS15030 58ebe900cabbf96c3d52da5c8c77624f 248 Pfam PF00072 Response regulator receiver domain 25 134 7.5E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 Gene3D G3DSA:1.20.1250.20 17 220 2.6E-26 T 06-07-2017 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 Gene3D G3DSA:1.20.1250.20 238 422 1.3E-20 T 06-07-2017 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 SUPERFAMILY SSF103473 17 422 1.7E-64 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 413 1.6E-143 T 06-07-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 Pfam PF07690 Major Facilitator Superfamily 22 379 2.6E-28 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS17155 367d3f6ef48c819c5d36063074b79ef2 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 Pfam PF00202 Aminotransferase class-III 74 448 1.9E-102 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 Gene3D G3DSA:3.90.1150.10 339 452 1.2E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 Gene3D G3DSA:3.40.640.10 100 338 4.5E-91 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 Hamap MF_01276 Putrescine aminotransferase [patA]. 1 459 86.225 T 06-07-2017 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 SUPERFAMILY SSF53383 71 450 1.48E-117 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS03140 25dcb6c6aee53d09a4d67ee14f5e73af 459 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 8 449 3.8E-282 T 06-07-2017 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 SUPERFAMILY SSF55594 4 90 1.7E-23 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.7E-21 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.1E-21 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.0E-8 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 2.0E-8 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.0E-8 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 Gene3D G3DSA:3.30.1340.10 3 89 9.5E-26 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS02600 3b277744b41dc0ad00b3f679fddc6229 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 06-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 SMART SM00062 24 244 2.9E-69 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 SMART SM00079 24 246 0.001 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 Gene3D G3DSA:3.40.190.10 203 245 2.4E-44 T 06-07-2017 LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 Gene3D G3DSA:3.40.190.10 22 107 2.4E-44 T 06-07-2017 LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 Gene3D G3DSA:3.40.190.10 112 202 5.5E-25 T 06-07-2017 LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 SUPERFAMILY SSF53850 1 245 9.6E-68 T 06-07-2017 LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 245 4.4E-65 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS21775 8194d82262f15b10625312a6c88ba806 246 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS05170 f6372e0a822b272efab2fe40d0f18983 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS05170 f6372e0a822b272efab2fe40d0f18983 180 Gene3D G3DSA:3.30.70.20 3 93 2.2E-20 T 06-07-2017 LFZ55_RS05170 f6372e0a822b272efab2fe40d0f18983 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS05170 f6372e0a822b272efab2fe40d0f18983 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 5.4E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS05170 f6372e0a822b272efab2fe40d0f18983 180 SUPERFAMILY SSF54862 18 115 4.6E-22 T 06-07-2017 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 Gene3D G3DSA:3.30.190.20 161 225 1.3E-47 T 06-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 Gene3D G3DSA:3.30.190.20 17 68 1.3E-47 T 06-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 SUPERFAMILY SSF56808 6 225 2.09E-83 T 06-07-2017 IPR023674 Ribosomal protein L1-like LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 Gene3D G3DSA:3.40.50.790 69 159 6.3E-41 T 06-07-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.662 T 06-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 PIRSF PIRSF002155 1 227 1.0E-78 T 06-07-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.0E-108 T 06-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 06-07-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS22815 e17050253e80a61f713ce88e8f82cf78 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.8E-53 T 06-07-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LFZ55_RS22675 6d45563aefe1868a7afe3a5e35d923fd 145 Pfam PF13673 Acetyltransferase (GNAT) domain 35 130 8.1E-18 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS22675 6d45563aefe1868a7afe3a5e35d923fd 145 Gene3D G3DSA:3.40.630.30 2 141 1.7E-28 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS22675 6d45563aefe1868a7afe3a5e35d923fd 145 SUPERFAMILY SSF55729 3 139 1.28E-27 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 7.2E-266 T 06-07-2017 IPR022946 Uncharacterised protein family UPF0313 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 Pfam PF08497 Radical SAM N-terminal 29 379 2.6E-146 T 06-07-2017 IPR013704 Uncharacterised protein family UPF0313, N-terminal LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 Gene3D G3DSA:3.80.30.20 374 642 9.2E-47 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 SMART SM00729 376 626 3.3E-5 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 Pfam PF04055 Radical SAM superfamily 380 585 3.5E-20 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 Pfam PF11842 Domain of unknown function (DUF3362) 594 716 4.6E-44 T 06-07-2017 IPR024560 Uncharacterised protein family UPF0313, C-terminal LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 06-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 693 49.754 T 06-07-2017 IPR022946 Uncharacterised protein family UPF0313 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 SUPERFAMILY SSF102114 358 440 1.26E-10 T 06-07-2017 LFZ55_RS03390 1b7031f55dd8477c612ed08510e1ab83 723 SUPERFAMILY SSF102114 470 623 1.26E-10 T 06-07-2017 LFZ55_RS02700 f7e5fa5f86ae91bce8e8b0c41f692af8 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 06-07-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02700 f7e5fa5f86ae91bce8e8b0c41f692af8 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.9E-38 T 06-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02700 f7e5fa5f86ae91bce8e8b0c41f692af8 103 SUPERFAMILY SSF141091 1 102 3.66E-37 T 06-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02700 f7e5fa5f86ae91bce8e8b0c41f692af8 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.804 T 06-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02700 f7e5fa5f86ae91bce8e8b0c41f692af8 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.7E-45 T 06-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 Pfam PF00664 ABC transporter transmembrane region 27 297 6.9E-42 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 Gene3D G3DSA:3.40.50.300 340 569 6.8E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 SUPERFAMILY SSF52540 336 576 1.41E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 Gene3D G3DSA:1.20.1560.10 12 325 2.3E-75 T 06-07-2017 LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 SUPERFAMILY SSF90123 12 325 2.35E-70 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 SMART SM00382 366 557 1.8E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18155 b6d028b220d9bb98a6aeefdb33e27941 593 Pfam PF00005 ABC transporter 357 505 4.0E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 Gene3D G3DSA:3.40.605.10 17 280 1.8E-93 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 SUPERFAMILY SSF53720 9 493 9.69E-155 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 Gene3D G3DSA:3.40.309.10 281 465 2.8E-56 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS03615 75dc7fa78f0d0f2c4cb599d81bb725e1 494 Pfam PF00171 Aldehyde dehydrogenase family 31 490 1.2E-154 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 8.8E-100 T 06-07-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 SUPERFAMILY SSF117916 95 184 7.63E-25 T 06-07-2017 LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-28 T 06-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.4E-12 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 Gene3D G3DSA:2.60.300.12 1 97 2.9E-17 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 Pfam PF01106 NifU-like domain 111 177 1.6E-20 T 06-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LFZ55_RS01625 3633e77d4a32b41a2451fc38cb1c2189 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.068 T 06-07-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 Gene3D G3DSA:3.30.70.580 9 113 1.0E-38 T 06-07-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 1.3E-81 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.767 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.7E-28 T 06-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 Pfam PF01416 tRNA pseudouridine synthase 17 112 6.3E-9 T 06-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 SUPERFAMILY SSF55120 9 265 2.3E-93 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 PIRSF PIRSF001430 9 261 4.3E-77 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07415 dfc9c552a815c4bf6b6f6cfe22187c71 270 Gene3D G3DSA:3.30.70.660 115 250 8.2E-47 T 06-07-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS13980 897ba3c4eb32aadc7a8127aae3e02912 347 SUPERFAMILY SSF50939 213 344 1.81E-53 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS13980 897ba3c4eb32aadc7a8127aae3e02912 347 SUPERFAMILY SSF50939 10 181 1.81E-53 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS13980 897ba3c4eb32aadc7a8127aae3e02912 347 Gene3D G3DSA:2.120.10.10 12 344 1.6E-62 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS13980 897ba3c4eb32aadc7a8127aae3e02912 347 Pfam PF13088 BNR repeat-like domain 33 330 8.9E-82 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LFZ55_RS15285 b1e0e7384162214e08ccb76711b4bbdd 531 SUPERFAMILY SSF53649 225 456 1.33E-13 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS15285 b1e0e7384162214e08ccb76711b4bbdd 531 Gene3D G3DSA:3.40.720.10 225 459 7.8E-7 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS15285 b1e0e7384162214e08ccb76711b4bbdd 531 Pfam PF00884 Sulfatase 223 460 1.2E-35 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.7E-146 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 06-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Gene3D G3DSA:3.40.47.10 4 126 1.4E-65 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Gene3D G3DSA:3.40.47.10 184 267 1.4E-65 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.938 T 06-07-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 3.0E-86 T 06-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Gene3D G3DSA:3.40.47.10 143 183 1.3E-59 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Gene3D G3DSA:3.40.47.10 268 386 1.3E-59 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 PIRSF PIRSF000429 1 387 4.0E-132 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 SUPERFAMILY SSF53901 1 259 5.94E-79 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 7.6E-51 T 06-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 06-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.2E-241 T 06-07-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 06-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 LFZ55_RS23540 9637d27f2317ce19d39f9f3321f79b83 387 SUPERFAMILY SSF53901 262 386 8.03E-44 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 SUPERFAMILY SSF52374 4 328 1.05E-109 T 06-07-2017 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 Gene3D G3DSA:3.40.50.620 4 237 1.0E-103 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 SUPERFAMILY SSF55174 327 423 1.44E-20 T 06-07-2017 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.618 T 06-07-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.9E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.9E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.9E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.9E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.8E-92 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 2.0E-149 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 SMART SM00363 358 419 4.4E-6 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 Gene3D G3DSA:3.10.290.10 322 423 2.1E-30 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS12970 777749a173ee0caf9456dbaf8f7245ab 424 Gene3D G3DSA:1.10.240.10 238 321 1.7E-42 T 06-07-2017 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 180 7.8E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.2E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.2E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.2E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.2E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 SUPERFAMILY SSF56784 1 214 7.62E-51 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 185 7.6E-16 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 1.4E-33 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 Gene3D G3DSA:3.40.50.1000 3 16 7.3E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01245 6377bee7a6108c040ebb0ba3ae76da22 216 Gene3D G3DSA:3.40.50.1000 90 214 7.3E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 SUPERFAMILY SSF46767 86 169 2.49E-34 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 SUPERFAMILY SSF53155 9 91 6.28E-5 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 8.4E-16 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 06-07-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 169 39.248 T 06-07-2017 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 Gene3D G3DSA:1.10.10.10 86 168 8.0E-38 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 4.9E-39 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS11585 e3f0bc760c13be4d8e0e89e5fff8b076 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 7.9E-36 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS15690 18a3edd188975550bfa439cac2c1e5b7 297 SUPERFAMILY SSF56112 3 270 2.55E-26 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS15690 18a3edd188975550bfa439cac2c1e5b7 297 Pfam PF01636 Phosphotransferase enzyme family 64 238 6.2E-6 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 SUPERFAMILY SSF52540 3 431 2.23E-180 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.3E-176 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.151 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Gene3D G3DSA:3.90.170.10 268 426 1.3E-65 T 06-07-2017 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 SMART SM00788 4 425 1.1E-300 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Gene3D G3DSA:1.10.300.10 103 195 1.5E-38 T 06-07-2017 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 06-07-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 4.1E-210 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 06-07-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Gene3D G3DSA:3.40.440.10 196 266 1.2E-71 T 06-07-2017 LFZ55_RS21700 8ac48ea2303e376b57bba52c56a31eef 432 Gene3D G3DSA:3.40.440.10 4 94 1.2E-71 T 06-07-2017 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 SMART SM00354 4 74 3.5E-33 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 Gene3D G3DSA:3.40.50.2300 54 174 3.2E-19 T 06-07-2017 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.8E-21 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 06-07-2017 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.8E-169 T 06-07-2017 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 SUPERFAMILY SSF53822 63 314 2.55E-59 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 2.1E-20 T 06-07-2017 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 SUPERFAMILY SSF47413 3 60 1.47E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 Gene3D G3DSA:3.40.50.2300 175 279 3.6E-41 T 06-07-2017 LFZ55_RS21320 3c7c86e6b19312959a5763333831497a 315 Gene3D G3DSA:1.10.260.40 3 53 2.0E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 PIRSF PIRSF006648 11 252 8.1E-22 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 Pfam PF01061 ABC-2 type transporter 9 218 1.1E-38 T 06-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.3E-7 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.3E-7 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.3E-7 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS19490 dac8962374f7950f110dcff71db81732 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.3E-7 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 Gene3D G3DSA:1.10.1040.10 175 290 1.0E-44 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.4E-23 T 06-07-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 SUPERFAMILY SSF51735 1 167 5.59E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 Gene3D G3DSA:3.40.50.720 1 174 8.8E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 SUPERFAMILY SSF48179 168 289 4.76E-38 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 5.5E-37 T 06-07-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 LFZ55_RS18300 b5899cdad15f97ca85b6dc93b2eade27 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 1.1E-73 T 06-07-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 SUPERFAMILY SSF53335 300 539 3.44E-48 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 SUPERFAMILY SSF53335 54 264 1.43E-37 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 Pfam PF13847 Methyltransferase domain 330 448 7.9E-13 T 06-07-2017 IPR025714 Methyltransferase domain LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 Pfam PF13649 Methyltransferase domain 71 165 2.4E-21 T 06-07-2017 LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 Gene3D G3DSA:3.40.50.150 304 540 6.5E-50 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 Gene3D G3DSA:3.40.50.150 234 280 2.1E-35 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS20805 a732e4bd14eda4d206adcb83d117b969 543 Gene3D G3DSA:3.40.50.150 55 198 2.1E-35 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 Gene3D G3DSA:3.40.1410.10 93 247 9.2E-45 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 SUPERFAMILY SSF64288 75 246 2.36E-40 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 SMART SM00345 28 87 2.0E-15 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 87 3.0E-16 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 Gene3D G3DSA:1.10.10.10 18 89 1.8E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.6E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.6E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 Pfam PF07702 UTRA domain 108 242 1.5E-35 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 SMART SM00866 107 243 1.0E-32 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS08545 0912d044bbec193ee7ef77729fec621e 248 SUPERFAMILY SSF46785 18 90 1.21E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 Gene3D G3DSA:1.10.10.10 1 67 1.6E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 SUPERFAMILY SSF46785 1 68 2.13E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 Pfam PF00155 Aminotransferase class I and II 126 427 7.3E-19 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 SMART SM00345 7 66 1.5E-17 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 6.6E-6 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 6.6E-6 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 Gene3D G3DSA:3.40.640.10 126 339 3.4E-49 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 SUPERFAMILY SSF53383 62 443 3.92E-75 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS05405 a4be215406a15d88dc68bd24b2142254 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.5E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Pfam PF01266 FAD dependent oxidoreductase 287 652 3.2E-47 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Gene3D G3DSA:3.40.50.150 31 270 1.6E-103 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 SUPERFAMILY SSF51905 591 679 1.36E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 SUPERFAMILY SSF51905 288 498 1.36E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Gene3D G3DSA:3.50.50.60 416 497 1.3E-25 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Gene3D G3DSA:3.50.50.60 280 364 1.3E-25 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Gene3D G3DSA:3.50.50.60 591 664 1.3E-25 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 27 677 28.558 T 06-07-2017 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 138 264 1.0E-49 T 06-07-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 LFZ55_RS07365 078c9230faca9dca2805e06520554dc8 686 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 287 682 3.4E-162 T 06-07-2017 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 LFZ55_RS01140 c8884c07003b8f436e13b8bcc3a129db 309 Pfam PF00294 pfkB family carbohydrate kinase 3 303 3.2E-71 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS01140 c8884c07003b8f436e13b8bcc3a129db 309 Gene3D G3DSA:3.40.1190.20 2 303 5.8E-75 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS01140 c8884c07003b8f436e13b8bcc3a129db 309 SUPERFAMILY SSF53613 2 303 1.09E-72 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS01140 c8884c07003b8f436e13b8bcc3a129db 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS01675 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 06-07-2017 LFZ55_RS15645 6864bf667f671368f975e4e66f794fb1 182 Gene3D G3DSA:3.30.1380.10 66 182 4.5E-30 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS15645 6864bf667f671368f975e4e66f794fb1 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 3.0E-62 T 06-07-2017 IPR010275 Protein of unknown function DUF882 LFZ55_RS15645 6864bf667f671368f975e4e66f794fb1 182 SUPERFAMILY SSF55166 68 182 2.04E-33 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS11430 086e2ec6e44b632da6a7ba96e2f9b533 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 3.4E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11430 086e2ec6e44b632da6a7ba96e2f9b533 280 Gene3D G3DSA:1.10.3720.10 4 266 7.0E-68 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11430 086e2ec6e44b632da6a7ba96e2f9b533 280 SUPERFAMILY SSF161098 5 280 7.66E-72 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 SUPERFAMILY SSF46689 176 224 1.34E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 Gene3D G3DSA:1.10.10.60 176 230 3.7E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 Gene3D G3DSA:1.10.10.60 231 278 1.3E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 SUPERFAMILY SSF46689 229 279 3.4E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 SMART SM00342 193 276 2.9E-27 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 Pfam PF12833 Helix-turn-helix domain 199 278 3.9E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 Pfam PF12852 Cupin 2 161 1.4E-21 T 06-07-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 SUPERFAMILY SSF51182 37 90 2.71E-6 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS17750 ad5395edd680138edc8286e8bd30d6ca 284 Gene3D G3DSA:2.60.120.280 40 159 1.5E-8 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Gene3D G3DSA:3.30.1600.10 149 193 3.3E-26 T 06-07-2017 IPR026591 Sirtuin family, catalytic core small domain LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Gene3D G3DSA:3.30.1600.10 57 96 3.3E-26 T 06-07-2017 IPR026591 Sirtuin family, catalytic core small domain LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 62.092 T 06-07-2017 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Gene3D G3DSA:3.40.50.1220 106 148 1.8E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Gene3D G3DSA:3.40.50.1220 38 56 1.8E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Gene3D G3DSA:3.40.50.1220 200 266 1.8E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 Pfam PF02146 Sir2 family 48 221 1.2E-50 T 06-07-2017 IPR003000 Sirtuin family GO:0070403 LFZ55_RS14160 73b04454805a39d6b7a762887359645a 273 SUPERFAMILY SSF52467 42 270 1.05E-74 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.8E-13 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 SUPERFAMILY SSF50331 123 192 8.75E-17 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 SUPERFAMILY SSF50331 200 259 1.49E-14 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Pfam PF03459 TOBE domain 197 257 6.2E-12 T 06-07-2017 IPR005116 Transport-associated OB, type 1 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Pfam PF03459 TOBE domain 125 187 1.6E-11 T 06-07-2017 IPR005116 Transport-associated OB, type 1 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Gene3D G3DSA:1.10.10.10 1 119 2.5E-42 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 SUPERFAMILY SSF46785 2 106 8.16E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Gene3D G3DSA:2.40.50.100 185 252 4.6E-24 T 06-07-2017 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 PIRSF PIRSF005763 1 262 7.5E-98 T 06-07-2017 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 Gene3D G3DSA:2.40.50.100 120 184 2.0E-31 T 06-07-2017 LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 2.4E-40 T 06-07-2017 IPR003725 Molybdenum-binding protein ModE, N-terminal LFZ55_RS16715 4a06d5a28601656b61ab21c0a1ffbcb9 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 5.3E-26 T 06-07-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 368 75.129 T 06-07-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 Pfam PF04055 Radical SAM superfamily 124 293 1.3E-16 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 Gene3D G3DSA:3.20.20.70 121 326 3.2E-16 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 PIRSF PIRSF006004 15 382 5.0E-148 T 06-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 19 373 1.1E-176 T 06-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS06255 ed0824505eee9008ebff9444fc365757 388 SUPERFAMILY SSF102114 120 330 1.7E-14 T 06-07-2017 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 Gene3D G3DSA:1.10.8.60 143 222 3.2E-39 T 06-07-2017 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 SUPERFAMILY SSF52540 1 210 5.31E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 Gene3D G3DSA:3.40.50.300 1 140 3.5E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 1.1E-72 T 06-07-2017 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 SUPERFAMILY SSF48019 212 334 1.79E-35 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 Gene3D G3DSA:1.20.272.20 223 341 5.5E-53 T 06-07-2017 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 3.5E-106 T 06-07-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 LFZ55_RS17335 226f1edee43adac144199e6a67157599 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.1E-44 T 06-07-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 06-07-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 SUPERFAMILY SSF56655 1 261 1.44E-85 T 06-07-2017 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 6.0E-37 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 6.0E-37 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 6.0E-37 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 6.0E-37 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 Gene3D G3DSA:3.30.540.10 2 152 1.6E-53 T 06-07-2017 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.7E-74 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 06-07-2017 IPR020583 Inositol monophosphatase, metal-binding site LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 Gene3D G3DSA:3.40.190.80 153 259 4.0E-38 T 06-07-2017 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS06150 f7ffec2ccd5776227c15ab06afeabdaa 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 5.9E-61 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.906 T 06-07-2017 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 4.8E-9 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 Gene3D G3DSA:1.10.357.10 7 190 1.2E-33 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 SUPERFAMILY SSF46689 5 84 5.49E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS00580 a680f0ef6360931aa267fa946d08eb1d 198 SUPERFAMILY SSF48498 84 193 3.45E-7 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Gene3D G3DSA:1.10.10.10 268 349 4.7E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 SUPERFAMILY SSF46767 268 348 2.09E-30 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 1.1E-19 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Pfam PF12833 Helix-turn-helix domain 105 182 2.3E-16 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 PIRSF PIRSF000409 1 353 8.4E-135 T 06-07-2017 IPR016221 Bifunctional regulatory protein Ada LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 SUPERFAMILY SSF57884 1 92 1.96E-34 T 06-07-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Gene3D G3DSA:1.10.10.60 138 180 8.7E-4 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Gene3D G3DSA:3.30.160.70 181 267 4.2E-30 T 06-07-2017 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 1.7E-31 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 SMART SM00342 99 181 2.7E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 SUPERFAMILY SSF53155 188 266 7.85E-19 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Gene3D G3DSA:3.40.10.10 2 87 9.1E-36 T 06-07-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Gene3D G3DSA:1.10.10.60 88 137 6.5E-22 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 1.3E-36 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 06-07-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 Pfam PF02805 Metal binding domain of Ada 11 75 8.5E-31 T 06-07-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LFZ55_RS07900 3d078b996dcd614c985715f3ad8cc30f 353 SUPERFAMILY SSF46689 85 133 1.43E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 Gene3D G3DSA:2.40.230.10 37 288 5.6E-101 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 SUPERFAMILY SSF56931 39 288 2.62E-91 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 1.5E-87 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS23655 06992fbc5876caf4a6831ae3fd10edeb 289 Pfam PF02253 Phospholipase A1 43 285 5.4E-89 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 SUPERFAMILY SSF82171 18 145 6.28E-20 T 06-07-2017 LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 SUPERFAMILY SSF82171 274 404 6.28E-20 T 06-07-2017 LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 SUPERFAMILY SSF82171 228 239 6.28E-20 T 06-07-2017 LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 Pfam PF12566 Protein of unknown function (DUF3748) 63 179 4.2E-53 T 06-07-2017 IPR022223 Protein of unknown function DUF3748 LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 Gene3D G3DSA:2.120.10.30 8 145 2.6E-29 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like LFZ55_RS00160 c9c2949bd5d254ed48f7991a228e2b19 408 Gene3D G3DSA:2.120.10.30 228 397 2.6E-29 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 2122 2281 2.1E-52 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF52777 625 794 1.45E-44 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF13193 AMP-binding enzyme C-terminal domain 1481 1555 2.6E-8 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF13193 AMP-binding enzyme C-terminal domain 2533 2609 1.2E-14 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 509 4.1E-10 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF56801 2089 2649 2.75E-164 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SMART SM00824 Thioesterase 2730 2977 0.0042 T 06-07-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2273 2284 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00668 Condensation domain 624 912 3.0E-72 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00668 Condensation domain 1669 1960 6.1E-75 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF47336 528 602 1.96E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF56801 1038 1593 5.1E-166 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF56801 12 549 4.58E-127 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 40 448 9.4E-101 T 06-07-2017 IPR010071 Amino acid adenylation domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1100 1497 1.2E-141 T 06-07-2017 IPR010071 Amino acid adenylation domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2147 2549 2.4E-135 T 06-07-2017 IPR010071 Amino acid adenylation domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2660 2675 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1218 1229 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 1070 1224 2.0E-53 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 13 167 6.4E-45 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:1.10.1200.10 2639 2707 1.2E-25 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:1.10.1200.10 541 605 3.7E-18 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:1.10.1200.10 1585 1650 7.9E-24 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF52777 801 1064 7.78E-64 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.30.300.30 421 540 1.5E-31 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.30.300.30 1468 1584 5.7E-36 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.30.300.30 2520 2638 3.1E-42 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF13745 HxxPF-repeated domain 1983 2071 2.0E-23 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF13745 HxxPF-repeated domain 935 1023 6.6E-26 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SMART SM00823 Phosphopantetheine attachment site 2636 2705 0.017 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SMART SM00823 Phosphopantetheine attachment site 536 605 0.0099 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SMART SM00823 Phosphopantetheine attachment site 1581 1649 0.016 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF52777 1672 1842 1.56E-45 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.1820 2712 2832 2.4E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.1820 2914 2978 2.4E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00501 AMP-binding enzyme 2126 2525 7.7E-107 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00501 AMP-binding enzyme 1078 1473 4.8E-106 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00501 AMP-binding enzyme 19 425 4.9E-77 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF47336 2628 2701 6.81E-17 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF47336 1574 1646 9.16E-18 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:2.30.38.10 2436 2515 6.1E-25 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:2.30.38.10 1386 1463 1.7E-29 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:2.30.38.10 334 412 3.8E-17 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF52777 1849 2112 8.78E-62 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00550 Phosphopantetheine attachment site 539 601 5.9E-8 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00550 Phosphopantetheine attachment site 2639 2700 9.1E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00550 Phosphopantetheine attachment site 1584 1645 1.2E-12 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 168 320 2.1E-27 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 2282 2435 1.1E-41 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Gene3D G3DSA:3.40.50.980 1225 1385 2.9E-49 T 06-07-2017 LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1605 1620 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 SUPERFAMILY SSF53474 2712 2974 2.22E-35 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS14795 362e5a1716e323b23bb7b3ddfb6361aa 2990 Pfam PF00975 Thioesterase domain 2728 2974 2.4E-16 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 SUPERFAMILY SSF51230 81 156 6.81E-26 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 06-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 Pfam PF00364 Biotin-requiring enzyme 83 155 9.0E-25 T 06-07-2017 IPR000089 Biotin/lipoyl attachment LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 3.7E-71 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 Gene3D G3DSA:2.40.50.100 80 156 3.1E-32 T 06-07-2017 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.0E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 2.0E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LFZ55_RS02350 8a3ade254af26b1b1c1b2a1af3e97ad2 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 2.0E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 Gene3D G3DSA:3.40.50.300 456 677 1.9E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 SMART SM00382 482 666 7.1E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 Pfam PF00005 ABC transporter 473 620 6.3E-22 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 ProSitePatterns PS00211 ABC transporters family signature. 592 606 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 SUPERFAMILY SSF90123 128 439 2.88E-23 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 SUPERFAMILY SSF52540 445 676 1.46E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21420 9ab2047ebe4c406871ad218a75b221c1 678 Gene3D G3DSA:1.20.1560.10 134 439 1.5E-17 T 06-07-2017 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 SUPERFAMILY SSF51905 359 443 9.61E-76 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 SUPERFAMILY SSF51905 4 259 9.61E-76 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Gene3D G3DSA:1.20.58.100 446 555 9.9E-38 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 SUPERFAMILY SSF46977 452 588 6.93E-47 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Gene3D G3DSA:3.50.50.60 6 242 1.1E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Gene3D G3DSA:3.50.50.60 351 425 1.1E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 PIRSF PIRSF000171 1 578 1.8E-46 T 06-07-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 06-07-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.4E-242 T 06-07-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 5.1E-278 T 06-07-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Gene3D G3DSA:3.90.700.10 243 349 1.5E-40 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Gene3D G3DSA:4.10.80.40 556 588 3.5E-21 T 06-07-2017 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Pfam PF00890 FAD binding domain 9 405 1.1E-118 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 6.1E-36 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.4E-5 T 06-07-2017 LFZ55_RS16920 f5ccacca63d423d532b7153a30d42d07 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-5 T 06-07-2017 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 183 1.9E-49 T 06-07-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 SUPERFAMILY SSF51735 202 446 6.24E-76 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 SUPERFAMILY SSF53223 7 196 8.96E-74 T 06-07-2017 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Gene3D G3DSA:3.40.192.10 68 188 4.8E-61 T 06-07-2017 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 06-07-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 SMART SM00839 204 445 2.7E-92 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Gene3D G3DSA:3.40.50.720 209 372 1.8E-61 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 8.4E-87 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 8.3E-33 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 8.3E-33 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 8.3E-33 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 8.3E-33 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Gene3D G3DSA:1.10.285.10 7 67 7.0E-27 T 06-07-2017 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 Gene3D G3DSA:1.10.285.10 373 446 6.1E-27 T 06-07-2017 LFZ55_RS13695 6bdef4133cfa704c6e88200ed009c49d 447 PIRSF PIRSF000185 22 447 7.2E-116 T 06-07-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 1.2E-27 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 1.2E-27 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 1.2E-27 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 1.2E-27 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 Gene3D G3DSA:1.10.275.10 4 142 6.3E-57 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 SUPERFAMILY SSF48557 2 458 6.04E-146 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 Gene3D G3DSA:1.10.40.30 411 462 5.9E-19 T 06-07-2017 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 Gene3D G3DSA:1.20.200.10 143 405 2.8E-90 T 06-07-2017 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 06-07-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.3E-273 T 06-07-2017 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 Pfam PF00206 Lyase 13 345 1.8E-114 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal LFZ55_RS21895 c61d8367c4bf52dd7706d7686c864ed7 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS15640 7c5e541663288e857d68570619a5aeae 215 SUPERFAMILY SSF56281 2 209 3.38E-60 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15640 7c5e541663288e857d68570619a5aeae 215 Gene3D G3DSA:3.60.15.10 2 210 1.2E-66 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15640 7c5e541663288e857d68570619a5aeae 215 SMART SM00849 12 192 1.2E-42 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15640 7c5e541663288e857d68570619a5aeae 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.9E-30 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.30.1490.20 141 199 1.8E-28 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.40.50.1380 939 1072 3.5E-39 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Pfam PF02142 MGS-like domain 957 1041 7.4E-18 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF52440 1 127 2.73E-50 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SMART SM01096 424 547 1.4E-72 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF48108 396 554 4.58E-52 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.1E-39 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.30.470.20 200 399 3.3E-76 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.30.470.20 746 933 2.3E-82 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF52440 557 676 1.44E-49 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SMART SM00851 956 1042 2.6E-29 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:1.10.1030.10 400 538 5.2E-51 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.30.1490.20 687 745 1.2E-26 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.405 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.40.50.20 3 108 1.4E-46 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF56059 128 401 3.18E-110 T 06-07-2017 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 875 2.0E-39 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.6E-77 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF56059 674 934 4.6E-105 T 06-07-2017 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.203 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 SUPERFAMILY SSF52335 938 1071 7.72E-35 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS20055 3d55a761c11189acece5298a5e1e3bfe 1074 Gene3D G3DSA:3.40.50.20 539 663 1.4E-61 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 SMART SM00448 2 115 4.3E-32 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 Pfam PF00072 Response regulator receiver domain 4 115 5.4E-31 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 Gene3D G3DSA:1.10.10.10 120 211 6.5E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 SUPERFAMILY SSF52172 3 159 9.23E-34 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 SMART SM00421 147 204 2.4E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09685 0a7072c218e5ce4aa7908bd04aecd8d0 218 Gene3D G3DSA:3.40.50.2300 2 119 9.7E-35 T 06-07-2017 LFZ55_RS09820 a6cb0dd1bdac5a3aefd94c0e52ffe96b 309 Pfam PF00691 OmpA family 161 258 2.5E-13 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS09820 a6cb0dd1bdac5a3aefd94c0e52ffe96b 309 Gene3D G3DSA:3.30.1330.60 152 265 1.0E-16 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS09820 a6cb0dd1bdac5a3aefd94c0e52ffe96b 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 67 8.0E-21 T 06-07-2017 IPR025713 Motility protein B, N-terminal domain LFZ55_RS09820 a6cb0dd1bdac5a3aefd94c0e52ffe96b 309 SUPERFAMILY SSF103088 157 265 2.62E-19 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS23675 4c07e640de7bdd459aa9b3606acb98a8 158 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 4 154 5.8E-27 T 06-07-2017 IPR010351 Protein of unknown function DUF943 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SUPERFAMILY SSF52058 199 355 9.52E-25 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 255 275 51.0 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 235 254 0.016 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 276 295 0.017 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 215 234 0.3 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 296 316 0.59 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 SMART SM00364 317 336 0.019 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Gene3D G3DSA:3.80.10.10 199 365 5.6E-35 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Pfam PF12468 Type III secretion system leucine rich repeat protein 129 179 9.7E-5 T 06-07-2017 IPR032674 LRR-containing bacterial E3 ligase, N-terminal LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Gene3D G3DSA:1.20.58.360 473 606 5.6E-50 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Gene3D G3DSA:1.20.58.90 607 681 2.4E-21 T 06-07-2017 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 398 610 4.0E-69 T 06-07-2017 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 LFZ55_RS14075 8e9e5e328d36f2a83014eb064bd8ee00 684 Gene3D G3DSA:1.20.1270.130 391 472 3.0E-24 T 06-07-2017 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 PIRSF PIRSF036427 1 236 9.8E-75 T 06-07-2017 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 SUPERFAMILY SSF53790 1 235 1.7E-42 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 1.9E-44 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 Gene3D G3DSA:3.40.1010.10 1 127 2.1E-23 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 4.8E-82 T 06-07-2017 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS09125 8ba9f3346c50a8b2d596ca6e8d9a6abf 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS23030 72cdc130e84587c24612ba0fa56fb8cf 105 Hamap MF_00744 Met repressor [metJ]. 1 105 42.54 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LFZ55_RS23030 72cdc130e84587c24612ba0fa56fb8cf 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.8E-59 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LFZ55_RS23030 72cdc130e84587c24612ba0fa56fb8cf 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-49 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LFZ55_RS23030 72cdc130e84587c24612ba0fa56fb8cf 105 Gene3D G3DSA:1.10.140.10 2 105 2.4E-65 T 06-07-2017 IPR023453 Methionine repressor MetJ domain LFZ55_RS23030 72cdc130e84587c24612ba0fa56fb8cf 105 SUPERFAMILY SSF47598 2 105 2.45E-58 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 5.0E-112 T 06-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 SUPERFAMILY SSF56300 3 123 2.89E-30 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 SUPERFAMILY SSF56300 151 223 2.89E-30 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 Gene3D G3DSA:3.60.21.10 173 221 1.9E-20 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 Gene3D G3DSA:3.60.21.10 3 125 1.9E-20 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 131.711 T 06-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 LFZ55_RS17860 00c655195adba564f104c733f734dcbd 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 204 6.8E-9 T 06-07-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 06-07-2017 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 PIRSF PIRSF000303 1 183 3.7E-65 T 06-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 SUPERFAMILY SSF52833 5 182 6.46E-56 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 06-07-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 51.556 T 06-07-2017 IPR033674 Thioredoxin/glutathione peroxidase BtuE LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 Gene3D G3DSA:3.40.30.10 4 182 2.5E-66 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 Pfam PF00255 Glutathione peroxidase 7 111 4.1E-45 T 06-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.1E-20 T 06-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.1E-20 T 06-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 LFZ55_RS13455 7953dcddc9484898bdca90f6f2f5bda8 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.1E-20 T 06-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 8.2E-25 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 Gene3D G3DSA:3.40.50.720 191 309 9.0E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 SMART SM00829 12 367 0.0039 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 SUPERFAMILY SSF50129 1 189 4.26E-72 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 SUPERFAMILY SSF51735 160 334 2.3E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 4.4E-22 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 Gene3D G3DSA:3.90.180.10 2 190 4.2E-69 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 SUPERFAMILY SSF50129 318 369 4.33E-12 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LFZ55_RS11830 b210f9385c87d90ac63429603d2b5890 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 7.7E-221 T 06-07-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 Gene3D G3DSA:3.30.70.260 324 409 5.1E-27 T 06-07-2017 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 Gene3D G3DSA:3.40.50.720 8 120 1.8E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 SUPERFAMILY SSF51735 108 295 3.41E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.3E-51 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 Gene3D G3DSA:3.40.50.720 121 297 1.9E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 SUPERFAMILY SSF52283 7 138 1.79E-49 T 06-07-2017 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 SUPERFAMILY SSF55021 328 409 2.33E-19 T 06-07-2017 LFZ55_RS04045 32dc2f427d0a16e53dfa0ec4a7d2dd5b 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 3.6E-37 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 Gene3D G3DSA:2.40.50.140 2 87 2.9E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 126 429 3.5E-26 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 362 392 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 SUPERFAMILY SSF53335 76 429 5.05E-88 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 431 63.661 T 06-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 Gene3D G3DSA:3.40.50.150 251 429 6.0E-61 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 Pfam PF01938 TRAM domain 11 66 3.6E-12 T 06-07-2017 IPR002792 TRAM domain LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 SUPERFAMILY SSF50249 2 66 1.66E-13 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 413 423 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site LFZ55_RS04655 bc9fb36855fddbed31e714444ccb1ede 431 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 423 2.0E-153 T 06-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 3.2E-12 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 30.752 T 06-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 SUPERFAMILY SSF52374 3 213 6.22E-59 T 06-07-2017 LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 4.1E-62 T 06-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 Gene3D G3DSA:3.40.50.620 6 213 3.7E-68 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17340 03d0ab4447e05b26bf359cf9cf95b577 213 Pfam PF01467 Cytidylyltransferase-like 7 187 1.2E-36 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 06-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 354 1.2E-104 T 06-07-2017 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 Gene3D G3DSA:3.90.1150.10 257 357 1.2E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 Gene3D G3DSA:3.40.640.10 39 256 1.4E-63 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 SUPERFAMILY SSF53383 6 357 2.72E-84 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS17345 2a99ba46a3a506941a4bcf55ad446677 364 Pfam PF00155 Aminotransferase class I and II 26 353 1.9E-38 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 SUPERFAMILY SSF50129 3 188 2.28E-23 T 06-07-2017 IPR011032 GroES-like LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 Gene3D G3DSA:3.90.180.10 4 180 1.2E-14 T 06-07-2017 IPR011032 GroES-like LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 SUPERFAMILY SSF51735 159 336 1.03E-19 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 Pfam PF00107 Zinc-binding dehydrogenase 186 329 2.1E-19 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 98 9.3E-7 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS03925 8934dfd7ec6429078fb0754e25a50211 424 Gene3D G3DSA:3.40.50.720 181 314 4.3E-22 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14205 4c1c172b85d434a9ffd375495d15f080 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.4E-11 T 06-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 LFZ55_RS16155 033542924d6a51f15f77d867eb0b5f3b 656 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 47 385 2.5E-16 T 06-07-2017 IPR010090 Phage tail tape measure protein LFZ55_RS16155 033542924d6a51f15f77d867eb0b5f3b 656 Pfam PF10145 Phage-related minor tail protein 86 284 3.5E-22 T 06-07-2017 IPR010090 Phage tail tape measure protein LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Pfam PF00672 HAMP domain 165 234 5.0E-13 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 SMART SM00387 345 455 2.9E-33 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Gene3D G3DSA:3.30.565.10 286 454 4.4E-39 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.4E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.4E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.4E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.4E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 2.9E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 SMART SM00304 184 237 1.1E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 SUPERFAMILY SSF47384 224 299 3.53E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Gene3D G3DSA:1.10.287.130 228 285 8.8E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 SMART SM00388 238 300 1.4E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 SUPERFAMILY SSF55874 289 453 1.57E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 146 1.2E-10 T 06-07-2017 IPR032404 Two-component sensor protein CpxA, periplasmic domain LFZ55_RS23165 82c5295bd2b19198fb93463c3c84e4b6 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 2.5E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.5E-168 T 06-07-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 5.2E-32 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 SUPERFAMILY SSF55031 181 293 1.02E-20 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 66.895 T 06-07-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 SUPERFAMILY SSF53187 4 180 5.43E-57 T 06-07-2017 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 SUPERFAMILY SSF53187 305 381 5.43E-57 T 06-07-2017 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Gene3D G3DSA:3.40.630.10 323 381 3.5E-60 T 06-07-2017 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Gene3D G3DSA:3.40.630.10 7 189 3.5E-60 T 06-07-2017 LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Pfam PF07687 Peptidase dimerisation domain 178 288 8.5E-25 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 Gene3D G3DSA:3.30.70.360 190 290 2.2E-25 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS22970 6e4c4d0b0f2a59c6d36a361a70d4e067 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS13020 16e8d6da58ba08c6146889c570a6b2ce 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.7E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13020 16e8d6da58ba08c6146889c570a6b2ce 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 1.7E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13020 16e8d6da58ba08c6146889c570a6b2ce 298 SUPERFAMILY SSF51430 4 295 2.36E-72 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS13020 16e8d6da58ba08c6146889c570a6b2ce 298 Pfam PF00248 Aldo/keto reductase family 18 291 1.1E-57 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS13020 16e8d6da58ba08c6146889c570a6b2ce 298 Gene3D G3DSA:3.20.20.100 2 292 1.8E-67 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS07660 bc1cb784457b3946f5c6688e9edfd65f 325 Pfam PF00146 NADH dehydrogenase 17 317 2.5E-121 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07660 bc1cb784457b3946f5c6688e9edfd65f 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.049 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07660 bc1cb784457b3946f5c6688e9edfd65f 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07660 bc1cb784457b3946f5c6688e9edfd65f 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15685 3112407ef27a74aef504e6a2ffd957f7 259 Pfam PF02698 DUF218 domain 81 216 1.4E-27 T 06-07-2017 IPR003848 Domain of unknown function DUF218 LFZ55_RS15685 3112407ef27a74aef504e6a2ffd957f7 259 Gene3D G3DSA:3.40.50.620 74 210 1.5E-16 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 1.6E-171 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Gene3D G3DSA:3.30.230.10 5 207 1.3E-78 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 06-07-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PIRSF PIRSF000530 1 382 3.6E-124 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Pfam PF10509 Galactokinase galactose-binding signature 10 58 9.0E-22 T 06-07-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Pfam PF08544 GHMP kinases C terminal 279 361 7.4E-13 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 06-07-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.8E-46 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.8E-46 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.8E-46 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.8E-46 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00473 Galactokinase signature 92 103 3.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00473 Galactokinase signature 27 45 3.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00473 Galactokinase signature 263 277 3.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 PRINTS PR00473 Galactokinase signature 112 130 3.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 SUPERFAMILY SSF54211 2 202 5.39E-65 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.0E-13 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Gene3D G3DSA:3.30.70.890 208 380 3.6E-62 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.539 T 06-07-2017 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LFZ55_RS16740 9b4ec7ac23fe926c351eccb5e512a145 382 SUPERFAMILY SSF55060 205 380 7.52E-52 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 444 1.8E-10 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 SUPERFAMILY SSF55957 374 456 1.2E-17 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 372 9.2E-25 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 SUPERFAMILY SSF53738 3 176 5.1E-39 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.6E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 1.6E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.6E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.6E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Gene3D G3DSA:3.30.310.50 375 455 2.7E-18 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Gene3D G3DSA:3.40.120.10 6 149 2.9E-36 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Gene3D G3DSA:3.40.120.10 255 368 7.6E-41 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 SUPERFAMILY SSF53738 153 261 1.33E-28 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 1.7E-32 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 258 1.8E-22 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 Gene3D G3DSA:3.40.120.10 172 254 8.1E-29 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08745 e242ac6b32e7b56030a09ff4253f444d 456 SUPERFAMILY SSF53738 263 368 8.24E-32 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS16145 4aa18fae55522b45ae12838cfe91fa82 394 Pfam PF04865 Baseplate J-like protein 82 328 3.4E-30 T 06-07-2017 IPR006949 Baseplate protein J-like LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.3E-36 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 3.6E-19 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 SUPERFAMILY SSF46785 5 60 5.84E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 SMART SM01134 74 232 6.3E-38 T 06-07-2017 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 SMART SM00420 6 58 6.4E-22 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 Gene3D G3DSA:3.40.50.1360 76 214 8.5E-4 T 06-07-2017 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 SUPERFAMILY SSF100950 75 234 3.14E-23 T 06-07-2017 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 69.683 T 06-07-2017 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS21640 16a749e04b2758ab592d982fc6293651 251 Gene3D G3DSA:1.10.10.10 1 55 2.8E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 Pfam PF00831 Ribosomal L29 protein 4 60 9.9E-23 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 06-07-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.547 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 SUPERFAMILY SSF46561 1 61 1.2E-21 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-22 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02080 b62c1dc417c418f6555850ca214a3656 63 Gene3D G3DSA:1.10.287.310 1 60 1.0E-27 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.501 T 06-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 Gene3D G3DSA:3.60.90.10 33 186 6.2E-47 T 06-07-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 SUPERFAMILY SSF56276 112 174 2.16E-23 T 06-07-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 SUPERFAMILY SSF56276 41 84 2.16E-23 T 06-07-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 PIRSF PIRSF001356 1 263 5.7E-156 T 06-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.4E-30 T 06-07-2017 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 LFZ55_RS19530 8d9d847b5c619e5c47e1236ba5019e63 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 7.4E-149 T 06-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.553 T 06-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 8.8E-190 T 06-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 Gene3D G3DSA:3.30.470.20 200 387 5.5E-68 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 SUPERFAMILY SSF56059 113 314 4.95E-56 T 06-07-2017 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 Pfam PF02222 ATP-grasp domain 123 295 1.0E-56 T 06-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 SUPERFAMILY SSF52440 3 112 3.17E-36 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 SUPERFAMILY SSF51246 319 391 1.73E-18 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 Gene3D G3DSA:3.40.50.20 5 120 3.4E-41 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS10025 31a4d843f93f100d20faed45975fbd27 392 Gene3D G3DSA:3.30.1490.20 123 199 3.0E-27 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS07240 a851c389d82504ed5cda64af515c6668 412 Gene3D G3DSA:3.90.1150.10 264 395 7.1E-45 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS07240 a851c389d82504ed5cda64af515c6668 412 SUPERFAMILY SSF53383 10 394 2.45E-107 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS07240 a851c389d82504ed5cda64af515c6668 412 Gene3D G3DSA:3.40.640.10 50 263 4.2E-62 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS07240 a851c389d82504ed5cda64af515c6668 412 Pfam PF00155 Aminotransferase class I and II 37 381 3.6E-60 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS00650 5af7ca2c5f8126e9adc076e17785ea26 337 Pfam PF01501 Glycosyl transferase family 8 29 275 4.9E-67 T 06-07-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 LFZ55_RS00650 5af7ca2c5f8126e9adc076e17785ea26 337 SUPERFAMILY SSF53448 29 297 3.66E-65 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS00650 5af7ca2c5f8126e9adc076e17785ea26 337 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 1.3E-22 T 06-07-2017 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 LFZ55_RS00650 5af7ca2c5f8126e9adc076e17785ea26 337 Gene3D G3DSA:3.90.550.10 28 295 8.4E-64 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS12715 a1dd820faf6d614e2092a569ef570a10 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 273 8.8E-102 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 06-07-2017 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.716 T 06-07-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 SMART SM00434 11 499 2.9E-303 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.7E-8 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.0E-10 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 6.1E-13 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.4E-11 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 4.8E-16 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.9E-14 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Gene3D G3DSA:1.10.268.10 363 496 4.1E-50 T 06-07-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 SUPERFAMILY SSF56719 30 521 4.32E-184 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Gene3D G3DSA:3.30.1360.40 236 333 1.1E-38 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Gene3D G3DSA:2.120.10.90 531 839 1.2E-142 T 06-07-2017 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.4E-154 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 SUPERFAMILY SSF101904 533 850 1.96E-112 T 06-07-2017 LFZ55_RS07865 bbf84586b6d2087f5fe3f82a9e3fdd1b 878 Gene3D G3DSA:3.90.199.10 34 216 1.0E-84 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:3.30.70.400 162 231 3.2E-31 T 06-07-2017 IPR015162 CheY binding LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 1.6E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 1.6E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 1.6E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 1.6E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:1.10.287.560 279 342 4.5E-23 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SMART SM01231 278 341 4.3E-21 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:1.20.120.160 3 142 2.6E-44 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SMART SM00260 518 658 6.4E-44 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Pfam PF01627 Hpt domain 8 105 2.2E-20 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SUPERFAMILY SSF55052 165 229 7.59E-19 T 06-07-2017 IPR015162 CheY binding LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:2.30.30.40 614 657 1.0E-24 T 06-07-2017 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:2.30.30.40 526 547 1.0E-24 T 06-07-2017 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SUPERFAMILY SSF47226 5 126 1.13E-33 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 525 2.2E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 279 341 1.1E-17 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SUPERFAMILY SSF55874 344 524 1.02E-34 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SUPERFAMILY SSF47384 279 342 3.77E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:2.40.50.180 550 613 1.8E-15 T 06-07-2017 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SMART SM00387 386 526 3.1E-23 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SMART SM00073 5 102 4.8E-35 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 SUPERFAMILY SSF50341 525 657 3.66E-31 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Gene3D G3DSA:3.30.565.10 343 525 1.4E-32 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Pfam PF01584 CheW-like domain 531 657 2.4E-26 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS09825 9235e9c0f396a6c3c22b58e36f4b2953 671 Pfam PF09078 CheY binding 166 228 1.7E-21 T 06-07-2017 IPR015162 CheY binding LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 SUPERFAMILY SSF52540 6 237 4.28E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 SUPERFAMILY SSF52540 298 523 4.3E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Gene3D G3DSA:3.40.50.300 132 280 4.4E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Gene3D G3DSA:3.40.50.300 5 100 4.4E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Gene3D G3DSA:3.40.50.300 318 529 4.6E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Pfam PF12848 ABC transporter 224 309 9.7E-21 T 06-07-2017 IPR032781 ABC-transporter extension domain LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Pfam PF00005 ABC transporter 336 467 2.8E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 Pfam PF00005 ABC transporter 18 184 1.3E-19 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 SMART SM00382 344 512 7.6E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16430 ef68eec33ce20b9b09fe46eb1336a9df 531 SMART SM00382 26 238 3.5E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF81653 321 418 3.92E-25 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 794 6.8E-90 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF81665 285 322 3.01E-13 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF81665 766 785 3.01E-13 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF81665 419 514 3.01E-13 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 653 2.3E-26 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 308 326 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 441 455 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 503 518 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 140 160 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 236 255 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 PRINTS PR00943 Copper-transporting ATPase signature 694 711 9.6E-9 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:3.30.70.100 1 65 5.6E-17 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 717 739 - T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:3.40.50.1000 493 533 1.9E-54 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:3.40.50.1000 645 785 1.9E-54 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Pfam PF00122 E1-E2 ATPase 289 510 1.4E-64 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 731 4.4E-50 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:3.30.70.100 100 164 3.5E-23 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:3.40.1110.10 534 644 3.3E-19 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Pfam PF00403 Heavy-metal-associated domain 104 158 3.6E-15 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Pfam PF00403 Heavy-metal-associated domain 8 61 7.3E-10 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF56784 575 823 6.87E-59 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF56784 518 538 6.87E-59 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 826 2.3E-182 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 Gene3D G3DSA:2.70.150.10 282 418 9.7E-28 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF55008 2 67 1.02E-12 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 SUPERFAMILY SSF55008 95 164 1.23E-18 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 826 1.4E-192 T 06-07-2017 LFZ55_RS17955 c6bff3ef9efbc52cf0b4380c238b8c0e 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 SMART SM00382 369 563 1.5E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 SUPERFAMILY SSF90123 16 331 5.1E-45 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 Pfam PF00005 ABC transporter 360 509 1.6E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 Gene3D G3DSA:3.40.50.300 341 573 2.9E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 Gene3D G3DSA:1.20.1560.10 16 326 2.6E-35 T 06-07-2017 LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 SUPERFAMILY SSF52540 337 579 9.4E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10725 8a9d4a852901f532f0c9afd3225c72a5 600 Pfam PF00664 ABC transporter transmembrane region 68 289 7.9E-22 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 SUPERFAMILY SSF53706 57 692 1.06E-171 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Gene3D G3DSA:2.40.40.20 667 811 1.2E-53 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 SUPERFAMILY SSF50692 636 811 8.82E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 80 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 115 9.3E-14 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 SMART SM00926 56 115 2.3E-10 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Pfam PF00384 Molybdopterin oxidoreductase 118 569 9.4E-84 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Pfam PF01568 Molydopterin dinucleotide binding domain 690 803 6.7E-26 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Gene3D G3DSA:2.20.25.90 56 119 7.1E-16 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Gene3D G3DSA:3.40.228.10 200 403 7.5E-80 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Gene3D G3DSA:3.40.50.740 120 199 2.3E-84 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 Gene3D G3DSA:3.40.50.740 404 649 2.3E-84 T 06-07-2017 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS12705 d155fbb917cbe89c3d02a8e6bee59272 811 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 811 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 18 411 3.7E-123 T 06-07-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 Gene3D G3DSA:1.20.1250.20 7 199 2.3E-43 T 06-07-2017 LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 SUPERFAMILY SSF103473 3 412 4.32E-79 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 Gene3D G3DSA:1.20.1250.20 217 418 1.8E-20 T 06-07-2017 LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 Pfam PF07690 Major Facilitator Superfamily 301 421 3.4E-8 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS03095 63d23a61e6cf83a9d8d42b1a28b25c2e 432 Pfam PF07690 Major Facilitator Superfamily 17 287 4.1E-47 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 12 685 8.5E-289 T 06-07-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 135 158 - T 06-07-2017 IPR025505 FHIPEP conserved site LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 31 44 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 149 167 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 179 196 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 130 146 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 87 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 230 244 1.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 PIRSF PIRSF005419 3 685 2.6E-214 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04930 22a6df34fdef42c3a907932e8feca240 685 Pfam PF00771 FHIPEP family 24 676 1.6E-219 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS02120 dbe782da2b9c8072406e13de5b866cf0 117 Gene3D G3DSA:3.30.420.100 24 117 6.9E-37 T 06-07-2017 LFZ55_RS02120 dbe782da2b9c8072406e13de5b866cf0 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 6.9E-44 T 06-07-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02120 dbe782da2b9c8072406e13de5b866cf0 117 SUPERFAMILY SSF53137 3 115 7.85E-54 T 06-07-2017 LFZ55_RS02120 dbe782da2b9c8072406e13de5b866cf0 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.0E-47 T 06-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02120 dbe782da2b9c8072406e13de5b866cf0 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.257 T 06-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01655 fa6a7e0a8c62dfbd1c07a2bafa5bd844 75 Pfam PF04023 FeoA domain 8 71 4.0E-9 T 06-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LFZ55_RS01655 fa6a7e0a8c62dfbd1c07a2bafa5bd844 75 SMART SM00899 1 72 7.9E-9 T 06-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LFZ55_RS01655 fa6a7e0a8c62dfbd1c07a2bafa5bd844 75 SUPERFAMILY SSF50037 2 73 2.52E-17 T 06-07-2017 IPR008988 Transcriptional repressor, C-terminal LFZ55_RS17670 bd107dcd7d59e583e286b3ad1a5c7ea6 122 SUPERFAMILY SSF142906 12 119 1.22E-37 T 06-07-2017 LFZ55_RS17670 bd107dcd7d59e583e286b3ad1a5c7ea6 122 Pfam PF04237 YjbR 15 106 2.0E-21 T 06-07-2017 IPR007351 Uncharacterised protein YjbR LFZ55_RS07465 4461cbae460cbf9d210e2803d04d73f2 367 Pfam PF01168 Alanine racemase, N-terminal domain 8 222 3.0E-17 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS07465 4461cbae460cbf9d210e2803d04d73f2 367 SUPERFAMILY SSF51419 9 224 7.59E-26 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS07465 4461cbae460cbf9d210e2803d04d73f2 367 Gene3D G3DSA:3.20.20.10 11 202 1.0E-10 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 SUPERFAMILY SSF82808 65 180 7.59E-50 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 Gene3D G3DSA:1.10.1220.10 1 40 6.6E-27 T 06-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 SUPERFAMILY SSF47598 1 35 4.22E-14 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 PIRSF PIRSF019401 1 180 5.7E-51 T 06-07-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 45.733 T 06-07-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 Pfam PF03925 SeqA protein C-terminal domain 70 178 7.0E-51 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LFZ55_RS17115 8aceb181fd1af89ab7ece3a1d577a84d 180 Gene3D G3DSA:1.20.1380.10 67 180 3.2E-56 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 Pfam PF03466 LysR substrate binding domain 97 296 6.0E-36 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 SUPERFAMILY SSF46785 9 89 4.68E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 Gene3D G3DSA:3.40.190.10 98 185 2.3E-13 T 06-07-2017 LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 SUPERFAMILY SSF53850 98 298 4.41E-30 T 06-07-2017 LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 Gene3D G3DSA:1.10.10.10 9 93 2.9E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 Gene3D G3DSA:3.40.190.10 186 271 1.5E-18 T 06-07-2017 LFZ55_RS01925 99f10a92f757633912503e1780098ede 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 63 3.3E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20780 bb407760e40c300a89904f0fef5e9fa0 897 Pfam PF03797 Autotransporter beta-domain 619 878 1.0E-29 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20780 bb407760e40c300a89904f0fef5e9fa0 897 SMART SM00869 618 884 8.3E-29 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20780 bb407760e40c300a89904f0fef5e9fa0 897 SUPERFAMILY SSF103515 606 897 2.62E-28 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20780 bb407760e40c300a89904f0fef5e9fa0 897 Gene3D G3DSA:2.40.128.130 615 897 1.7E-39 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20780 bb407760e40c300a89904f0fef5e9fa0 897 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 474 897 7.8E-18 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS05400 30eb596f45dac5da16c28f234884aacd 143 SUPERFAMILY SSF69118 8 143 1.55E-42 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS05400 30eb596f45dac5da16c28f234884aacd 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 1.2E-19 T 06-07-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LFZ55_RS05400 30eb596f45dac5da16c28f234884aacd 143 Gene3D G3DSA:1.20.1290.10 8 143 2.1E-49 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS05400 30eb596f45dac5da16c28f234884aacd 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 1.4E-16 T 06-07-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SUPERFAMILY SSF49785 15 219 2.13E-66 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 3.9E-38 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 3.9E-38 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 3.9E-38 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 3.9E-38 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 3.9E-38 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Gene3D G3DSA:2.60.40.320 209 334 8.0E-31 T 06-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Pfam PF16353 Domain of unknown function(DUF4981) 640 726 4.1E-15 T 06-07-2017 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SUPERFAMILY SSF49303 622 729 1.58E-26 T 06-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SUPERFAMILY SSF49303 221 334 1.09E-25 T 06-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Pfam PF00703 Glycosyl hydrolases family 2 221 334 6.5E-14 T 06-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 06-07-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Gene3D G3DSA:2.70.98.10 742 1024 3.7E-83 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SUPERFAMILY SSF74650 743 1024 3.45E-92 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 06-07-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SUPERFAMILY SSF51445 336 625 5.8E-104 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 7.9E-121 T 06-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 52 219 3.8E-65 T 06-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1025 17.31 T 06-07-2017 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Gene3D G3DSA:3.20.20.80 336 624 3.5E-117 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Gene3D G3DSA:2.60.120.260 9 208 9.1E-82 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Gene3D G3DSA:2.60.40.320 626 730 1.6E-30 T 06-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 SMART SM01038 752 1025 9.4E-113 T 06-07-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS19545 2b2695ee62ee464d566880d89cb5db97 1025 Pfam PF02929 Beta galactosidase small chain 755 1022 6.9E-58 T 06-07-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS16150 a80a6347a7401cb15564f80e29b359d6 109 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 6.7E-44 T 06-07-2017 IPR019697 Bacteriophage HP1, Orf28 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 Gene3D G3DSA:3.30.450.20 20 114 3.4E-20 T 06-07-2017 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.5E-38 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.5E-38 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.5E-38 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.5E-38 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 503 4.9E-49 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 1.9E-9 T 06-07-2017 IPR000014 PAS domain LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 SMART SM00086 80 121 7.1E-5 T 06-07-2017 IPR001610 PAC motif LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 SUPERFAMILY SSF55785 21 114 8.03E-24 T 06-07-2017 IPR000014 PAS domain LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 Pfam PF08447 PAS fold 31 109 1.1E-13 T 06-07-2017 IPR013655 PAS fold-3 GO:0005515 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 SMART SM00283 259 506 2.3E-85 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 SUPERFAMILY SSF58104 233 505 1.57E-59 T 06-07-2017 LFZ55_RS03145 1aa8744692bac93e5f8999a68fe366db 506 Gene3D G3DSA:1.10.287.950 275 478 2.4E-52 T 06-07-2017 LFZ55_RS01715 efe3ca177e9d3c064e707582fb3841d0 198 Gene3D G3DSA:3.90.79.10 20 194 1.5E-42 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS01715 efe3ca177e9d3c064e707582fb3841d0 198 Pfam PF00293 NUDIX domain 58 161 2.3E-12 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS01715 efe3ca177e9d3c064e707582fb3841d0 198 SUPERFAMILY SSF55811 14 192 3.52E-37 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS01715 efe3ca177e9d3c064e707582fb3841d0 198 ProSitePatterns PS00893 Nudix box signature. 91 112 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 Pfam PF00263 Bacterial type II and III secretion system protein 339 496 1.1E-32 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 192 209 9.3E-35 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 386 401 9.3E-35 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 279 299 9.3E-35 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 478 497 9.3E-35 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 352 371 9.3E-35 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 30 499 8.7E-152 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS18935 c878b89425f6374a4a104fef547a8335 501 Pfam PF03958 Bacterial type II/III secretion system short domain 180 275 1.6E-20 T 06-07-2017 IPR005644 NolW-like LFZ55_RS02885 d232e31ab811bc9c45f8eb3f82df1670 131 SUPERFAMILY SSF52980 17 125 2.68E-23 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS02885 d232e31ab811bc9c45f8eb3f82df1670 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.912 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 LFZ55_RS02885 d232e31ab811bc9c45f8eb3f82df1670 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 16 131 1.3E-56 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 LFZ55_RS02885 d232e31ab811bc9c45f8eb3f82df1670 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 1.0E-24 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 LFZ55_RS02885 d232e31ab811bc9c45f8eb3f82df1670 131 Gene3D G3DSA:3.40.1350.10 24 128 3.3E-37 T 06-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 LFZ55_RS11110 3e61ee588bc556eeb6a4b1ae49c1d498 212 Pfam PF03922 OmpW family 23 212 5.9E-69 T 06-07-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 LFZ55_RS11110 3e61ee588bc556eeb6a4b1ae49c1d498 212 SUPERFAMILY SSF56925 42 212 1.75E-25 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS11110 3e61ee588bc556eeb6a4b1ae49c1d498 212 Gene3D G3DSA:2.40.160.20 22 212 8.2E-71 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 SMART SM00421 133 190 4.8E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 1.6E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 1.6E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 1.6E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 Gene3D G3DSA:3.40.50.2300 4 118 3.7E-26 T 06-07-2017 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 188 7.6E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-20 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 Gene3D G3DSA:1.10.10.10 134 191 2.3E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 SMART SM00448 2 113 5.6E-20 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 SUPERFAMILY SSF52172 6 163 1.85E-29 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS13290 6404fa07bacec2e0ede9ba8d93740fd5 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 Pfam PF03109 ABC1 family 116 232 2.5E-34 T 06-07-2017 IPR004147 UbiB domain LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 SUPERFAMILY SSF56112 94 159 3.71E-50 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 SUPERFAMILY SSF56112 194 438 3.71E-50 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 Gene3D G3DSA:3.30.200.20 193 244 7.6E-4 T 06-07-2017 LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 Gene3D G3DSA:3.30.200.20 127 157 7.6E-4 T 06-07-2017 LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.948 T 06-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 LFZ55_RS23580 728abb4bf7fccba37c0e2d1d0d21a3dc 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 445 5.2E-186 T 06-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 LFZ55_RS02675 b4581b6a8141ed2f3556f2ac34cd770a 98 Gene3D G3DSA:3.30.750.24 2 90 3.1E-11 T 06-07-2017 IPR002645 STAS domain LFZ55_RS02675 b4581b6a8141ed2f3556f2ac34cd770a 98 SUPERFAMILY SSF52091 1 91 6.67E-14 T 06-07-2017 IPR002645 STAS domain LFZ55_RS02675 b4581b6a8141ed2f3556f2ac34cd770a 98 Pfam PF13466 STAS domain 14 90 4.8E-17 T 06-07-2017 IPR002645 STAS domain LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Pfam PF08245 Mur ligase middle domain 106 292 1.8E-49 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 SUPERFAMILY SSF53244 313 446 1.83E-37 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Pfam PF01225 Mur ligase family, catalytic domain 27 92 7.2E-10 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Gene3D G3DSA:3.40.1190.10 82 310 3.9E-75 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Gene3D G3DSA:3.90.190.20 313 449 9.2E-45 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 6.3E-142 T 06-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.243 T 06-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 SUPERFAMILY SSF63418 1 95 5.89E-28 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 SUPERFAMILY SSF53623 100 310 1.31E-58 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 392 3.0E-14 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19755 db63812872bf398c04d45a4bf65285cf 452 Gene3D G3DSA:3.40.1390.10 1 80 6.0E-26 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.4E-25 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 SMART SM00859 6 121 5.3E-35 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 PIRSF PIRSF000148 4 337 2.6E-96 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 Gene3D G3DSA:3.40.50.720 1 144 1.0E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 SUPERFAMILY SSF51735 5 158 2.03E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 Gene3D G3DSA:3.30.360.10 145 314 1.3E-49 T 06-07-2017 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 SUPERFAMILY SSF55347 132 319 8.18E-49 T 06-07-2017 LFZ55_RS07410 8943f2b67fde3545c6c5a927cc13210f 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 2.6E-39 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 SMART SM00079 42 262 7.8E-5 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 SMART SM00062 42 263 6.7E-85 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 Gene3D G3DSA:3.40.190.10 120 222 1.4E-31 T 06-07-2017 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 Gene3D G3DSA:3.40.190.10 38 119 1.0E-45 T 06-07-2017 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 Gene3D G3DSA:3.40.190.10 223 265 1.0E-45 T 06-07-2017 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 2.1E-70 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS09650 ccfda070085cc12e86ae729a4e7654ad 266 SUPERFAMILY SSF53850 15 264 3.93E-75 T 06-07-2017 LFZ55_RS09020 6b7aaf6ff2cb7beb855bc9a97287b5a1 91 SMART SM00877 3 79 4.5E-37 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09020 6b7aaf6ff2cb7beb855bc9a97287b5a1 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site LFZ55_RS09020 6b7aaf6ff2cb7beb855bc9a97287b5a1 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 45 6.0E-16 T 06-07-2017 LFZ55_RS09020 6b7aaf6ff2cb7beb855bc9a97287b5a1 91 Pfam PF00936 BMC domain 4 79 2.8E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09020 6b7aaf6ff2cb7beb855bc9a97287b5a1 91 SUPERFAMILY SSF143414 3 89 5.1E-32 T 06-07-2017 LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 292 721 2.1E-62 T 06-07-2017 IPR006474 Helicase Cas3, CRISPR-associated, core LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 SUPERFAMILY SSF52540 287 340 1.25E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 SUPERFAMILY SSF52540 386 479 1.25E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 SUPERFAMILY SSF52540 522 665 1.25E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 SMART SM00487 268 512 0.0073 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 Gene3D G3DSA:3.40.50.300 543 661 1.4E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 Gene3D G3DSA:3.40.50.300 408 482 3.8E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 Gene3D G3DSA:3.40.50.300 269 375 3.8E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04730 20a4d3aa39a5f0a205506a6cf562de2f 887 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 24 219 5.0E-26 T 06-07-2017 IPR006483 CRISPR-associated Cas3-HD domain LFZ55_RS21075 be34103a404447d217543668c9466d48 453 Pfam PF00145 C-5 cytosine-specific DNA methylase 296 429 8.0E-9 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21075 be34103a404447d217543668c9466d48 453 Pfam PF00145 C-5 cytosine-specific DNA methylase 7 194 4.5E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21075 be34103a404447d217543668c9466d48 453 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 156 169 5.7E-17 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 8 24 5.7E-17 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 108 122 5.7E-17 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 Gene3D G3DSA:3.90.120.10 168 196 4.2E-11 T 06-07-2017 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 Gene3D G3DSA:3.90.120.10 332 417 4.2E-11 T 06-07-2017 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 Gene3D G3DSA:3.40.50.150 6 167 3.3E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21075 be34103a404447d217543668c9466d48 453 SUPERFAMILY SSF53335 320 431 4.71E-65 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21075 be34103a404447d217543668c9466d48 453 SUPERFAMILY SSF53335 7 208 4.71E-65 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS21075 be34103a404447d217543668c9466d48 453 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 68 80 - T 06-07-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 LFZ55_RS21075 be34103a404447d217543668c9466d48 453 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 9 429 5.7E-64 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS07025 220557799bd36cc05725601685eb9583 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 269 1.2E-112 T 06-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LFZ55_RS07025 220557799bd36cc05725601685eb9583 277 SUPERFAMILY SSF161098 16 264 2.88E-57 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07025 220557799bd36cc05725601685eb9583 277 Gene3D G3DSA:1.10.3720.10 19 273 1.2E-53 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07025 220557799bd36cc05725601685eb9583 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 4.1E-32 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07025 220557799bd36cc05725601685eb9583 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.2E-113 T 06-07-2017 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 SMART SM00345 6 65 1.7E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.4E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.4E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 Gene3D G3DSA:1.10.10.10 3 61 1.7E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 Pfam PF07702 UTRA domain 87 219 6.4E-29 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 9.4E-19 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 SUPERFAMILY SSF46785 4 69 4.39E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 SMART SM00866 86 225 7.3E-24 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 Gene3D G3DSA:3.40.1410.10 62 230 1.3E-42 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS17680 145d60785a01e8e0b273ae4433c16bda 232 SUPERFAMILY SSF64288 53 226 8.79E-38 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS18740 c40ed5f73db0552b62452757aa20288d 186 Pfam PF02600 Disulfide bond formation protein DsbB 17 95 3.6E-8 T 06-07-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 LFZ55_RS18740 c40ed5f73db0552b62452757aa20288d 186 SUPERFAMILY SSF158442 17 127 4.45E-20 T 06-07-2017 LFZ55_RS18740 c40ed5f73db0552b62452757aa20288d 186 Gene3D G3DSA:1.20.1550.10 20 95 3.2E-6 T 06-07-2017 IPR023380 Disulphide bond formation protein DsbB-like domain LFZ55_RS00390 0ea8cec8a5ab632dca9356f2a715ea76 205 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 1 205 9.0E-108 T 06-07-2017 LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.7E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 SUPERFAMILY SSF51735 9 252 2.84E-77 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 Pfam PF00106 short chain dehydrogenase 10 203 3.2E-63 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.2E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.2E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.2E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS21180 d29c4c74ff9d2cb1eb357dc6fe9188ee 254 Gene3D G3DSA:3.40.50.720 4 252 2.3E-82 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 Gene3D G3DSA:1.10.10.10 95 172 9.4E-37 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 Gene3D G3DSA:1.10.10.10 3 87 5.0E-39 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.2E-63 T 06-07-2017 IPR007432 Protein of unknown function DUF480 LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 SUPERFAMILY SSF46785 90 172 3.03E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.665 T 06-07-2017 IPR007432 Protein of unknown function DUF480 LFZ55_RS14430 3e1a11d6b58aec307424588e5d33a49e 215 SUPERFAMILY SSF46785 2 84 1.18E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22805 6a330b20e40b91de1079b178da95a650 165 Pfam PF00466 Ribosomal protein L10 5 101 5.2E-25 T 06-07-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 LFZ55_RS22805 6a330b20e40b91de1079b178da95a650 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.51 T 06-07-2017 IPR022973 Ribosomal protein L10 LFZ55_RS22805 6a330b20e40b91de1079b178da95a650 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 06-07-2017 LFZ55_RS22805 6a330b20e40b91de1079b178da95a650 165 SUPERFAMILY SSF160369 4 160 3.92E-47 T 06-07-2017 LFZ55_RS22805 6a330b20e40b91de1079b178da95a650 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 06-07-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 Pfam PF01012 Electron transfer flavoprotein domain 27 170 9.2E-16 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 Gene3D G3DSA:3.40.50.620 4 170 4.6E-25 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 SUPERFAMILY SSF52402 6 169 2.23E-21 T 06-07-2017 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 PIRSF PIRSF000089 3 314 1.4E-81 T 06-07-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 Hamap MF_01056 Protein FixB [fixB]. 1 314 56.49 T 06-07-2017 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 SMART SM00893 7 181 7.1E-11 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 191 275 5.6E-29 T 06-07-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 SUPERFAMILY SSF52467 191 312 3.27E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 Gene3D G3DSA:3.40.50.1220 186 312 3.3E-48 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS19995 a03fb88b01b1c347a6d9da627df57186 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 256 282 - T 06-07-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.4E-121 T 06-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Gene3D G3DSA:3.90.800.10 68 180 2.4E-39 T 06-07-2017 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 5.8E-210 T 06-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 SUPERFAMILY SSF48163 299 461 1.44E-45 T 06-07-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Gene3D G3DSA:3.40.50.620 2 67 1.6E-54 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Gene3D G3DSA:3.40.50.620 181 231 1.6E-54 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Gene3D G3DSA:1.10.1160.10 233 314 1.9E-36 T 06-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 SUPERFAMILY SSF52374 3 298 5.9E-114 T 06-07-2017 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.061 T 06-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LFZ55_RS07135 aa9a841819249bd89de1ea218bfd17a9 471 Gene3D G3DSA:1.10.10.350 363 461 9.4E-32 T 06-07-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Gene3D G3DSA:3.40.190.10 287 314 2.8E-19 T 06-07-2017 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Gene3D G3DSA:3.40.190.10 105 187 2.8E-19 T 06-07-2017 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 2.6E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Gene3D G3DSA:3.40.190.10 188 282 6.0E-18 T 06-07-2017 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 1.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 1.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Pfam PF03466 LysR substrate binding domain 138 311 3.7E-15 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 Gene3D G3DSA:1.10.10.10 14 100 4.3E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 SUPERFAMILY SSF46785 19 98 1.45E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19810 846bd14ef7c69251c9cba07a46089483 314 SUPERFAMILY SSF53850 105 311 1.19E-38 T 06-07-2017 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.6E-20 T 06-07-2017 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.6E-20 T 06-07-2017 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-20 T 06-07-2017 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.6E-20 T 06-07-2017 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 SUPERFAMILY SSF51905 4 177 1.47E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 SUPERFAMILY SSF51905 268 385 1.47E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 06-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 1.2E-133 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 Pfam PF01494 FAD binding domain 4 345 1.5E-29 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 Gene3D G3DSA:3.50.50.60 269 357 6.3E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04085 db3fe57e385974214f9a0b663a178b03 400 Gene3D G3DSA:3.50.50.60 3 182 6.3E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS23785 0780901c228713eea2e5db41ae90113e 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 63.653 T 06-07-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 LFZ55_RS23785 0780901c228713eea2e5db41ae90113e 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 7.1E-177 T 06-07-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Gene3D G3DSA:3.40.50.2300 360 430 1.5E-74 T 06-07-2017 LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Gene3D G3DSA:3.40.50.2300 256 289 1.5E-74 T 06-07-2017 LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Gene3D G3DSA:3.40.50.2300 606 670 1.5E-74 T 06-07-2017 LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 SUPERFAMILY SSF53822 258 287 2.38E-76 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 SUPERFAMILY SSF53822 529 681 2.38E-76 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 SUPERFAMILY SSF53822 358 490 2.38E-76 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 677 35.674 T 06-07-2017 IPR007443 Penicillin-binding protein activator LpoA LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Pfam PF04348 LppC putative lipoprotein 41 287 8.0E-46 T 06-07-2017 IPR007443 Penicillin-binding protein activator LpoA LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Pfam PF04348 LppC putative lipoprotein 356 677 1.0E-84 T 06-07-2017 IPR007443 Penicillin-binding protein activator LpoA LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Gene3D G3DSA:3.40.50.2300 530 605 4.2E-54 T 06-07-2017 LFZ55_RS02890 39fa188131578a04b53e67bc30058b01 683 Gene3D G3DSA:3.40.50.2300 431 491 4.2E-54 T 06-07-2017 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 Pfam PF03466 LysR substrate binding domain 91 274 6.7E-13 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 Gene3D G3DSA:3.40.190.10 85 181 3.0E-6 T 06-07-2017 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 Gene3D G3DSA:1.10.10.10 5 84 8.1E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 SUPERFAMILY SSF53850 93 274 4.52E-15 T 06-07-2017 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.5E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 SUPERFAMILY SSF46785 4 85 7.69E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23940 d1af0ac808bb72317e7a3446e608e617 282 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 5 282 58.726 T 06-07-2017 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SUPERFAMILY SSF48452 632 682 4.13E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SUPERFAMILY SSF48452 489 568 4.13E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Pfam PF13432 Tetratricopeptide repeat 298 359 3.4E-6 T 06-07-2017 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Pfam PF13432 Tetratricopeptide repeat 412 465 0.0028 T 06-07-2017 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Pfam PF13432 Tetratricopeptide repeat 631 688 5.3E-5 T 06-07-2017 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Pfam PF13176 Tetratricopeptide repeat 489 516 0.012 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SUPERFAMILY SSF48452 602 760 6.33E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Gene3D G3DSA:1.25.40.10 79 241 1.1E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Gene3D G3DSA:1.25.40.10 373 576 8.7E-22 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Gene3D G3DSA:1.25.40.10 296 358 1.1E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 825 1159 2.9E-118 T 06-07-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 Gene3D G3DSA:1.25.40.10 631 761 2.6E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SUPERFAMILY SSF48452 79 244 3.16E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SUPERFAMILY SSF48452 299 455 3.16E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SMART SM00028 374 407 1.7 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SMART SM00028 484 517 34.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SMART SM00028 326 359 0.0098 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SMART SM00028 408 441 13.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS01115 77791245c30d89d4e23e18052a472ba0 1180 SMART SM00028 626 659 220.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS23035 ecdb90a1f2b8a9a8b7e13e8e4f7122f9 474 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 24 467 8.4E-83 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS23035 ecdb90a1f2b8a9a8b7e13e8e4f7122f9 474 SUPERFAMILY SSF103473 25 460 4.58E-31 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS23035 ecdb90a1f2b8a9a8b7e13e8e4f7122f9 474 Gene3D G3DSA:1.20.1250.20 233 461 3.7E-21 T 06-07-2017 LFZ55_RS23035 ecdb90a1f2b8a9a8b7e13e8e4f7122f9 474 Gene3D G3DSA:1.20.1250.20 32 226 1.9E-6 T 06-07-2017 LFZ55_RS23035 ecdb90a1f2b8a9a8b7e13e8e4f7122f9 474 Pfam PF13347 MFS/sugar transport protein 26 456 1.1E-77 T 06-07-2017 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 6.2E-71 T 06-07-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 Gene3D G3DSA:3.30.428.10 176 345 2.4E-79 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 2.4E-69 T 06-07-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 PIRSF PIRSF000808 1 341 1.0E-126 T 06-07-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 06-07-2017 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 Gene3D G3DSA:3.30.428.10 45 175 6.2E-57 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 347 3.2E-209 T 06-07-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 SUPERFAMILY SSF54197 4 177 3.78E-71 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS16735 093a33ec90e86850cdf9d83339eab664 348 SUPERFAMILY SSF54197 179 345 1.86E-58 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 275 288 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 252 270 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 325 340 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 3.0E-68 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 Gene3D G3DSA:3.40.50.2300 22 222 2.9E-65 T 06-07-2017 LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 SUPERFAMILY SSF53822 22 357 2.89E-88 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS01425 485500519b4983f3ce0b4380b4ef221f 365 Pfam PF13458 Periplasmic binding protein 24 344 3.1E-56 T 06-07-2017 IPR028081 Leucine-binding protein domain LFZ55_RS17675 810e85c5af132165e4d105b266216102 217 Pfam PF00881 Nitroreductase family 8 193 1.6E-33 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LFZ55_RS17675 810e85c5af132165e4d105b266216102 217 SUPERFAMILY SSF55469 1 216 1.57E-64 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS17675 810e85c5af132165e4d105b266216102 217 Gene3D G3DSA:3.40.109.10 1 215 9.7E-62 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS00785 752bca419f9de281c2d48ca5c871db24 196 Gene3D G3DSA:1.20.120.330 23 189 1.2E-78 T 06-07-2017 LFZ55_RS00785 752bca419f9de281c2d48ca5c871db24 196 SUPERFAMILY SSF158668 27 188 1.57E-57 T 06-07-2017 LFZ55_RS00785 752bca419f9de281c2d48ca5c871db24 196 Pfam PF05068 Mannitol repressor 30 188 9.5E-62 T 06-07-2017 IPR007761 Mannitol repressor LFZ55_RS24690 bca74f1c03b9ed60210b461891d7f101 816 Pfam PF13953 PapC C-terminal domain 745 799 1.8E-11 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS24690 bca74f1c03b9ed60210b461891d7f101 816 Pfam PF13954 PapC N-terminal domain 30 170 1.9E-30 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS24690 bca74f1c03b9ed60210b461891d7f101 816 Pfam PF00577 Outer membrane usher protein 184 727 1.8E-120 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS24690 bca74f1c03b9ed60210b461891d7f101 816 SUPERFAMILY SSF141729 27 144 1.16E-23 T 06-07-2017 LFZ55_RS19015 d3b63843fa8afd2c83091cdd3ce14d41 152 Gene3D G3DSA:3.40.50.2020 1 145 1.0E-44 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS19015 d3b63843fa8afd2c83091cdd3ce14d41 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.228 T 06-07-2017 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 LFZ55_RS19015 d3b63843fa8afd2c83091cdd3ce14d41 152 SUPERFAMILY SSF53271 4 144 5.77E-32 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS19015 d3b63843fa8afd2c83091cdd3ce14d41 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 1.8E-15 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SUPERFAMILY SSF55785 82 174 2.09E-7 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SUPERFAMILY SSF46689 454 507 7.17E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Pfam PF00158 Sigma-54 interaction domain 206 365 1.1E-55 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SMART SM00091 80 146 1.1E-6 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Gene3D G3DSA:1.10.8.60 372 442 5.3E-19 T 06-07-2017 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.3E-28 T 06-07-2017 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Gene3D G3DSA:3.40.50.300 203 371 1.8E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Gene3D G3DSA:3.30.70.260 2 68 1.4E-4 T 06-07-2017 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Gene3D G3DSA:3.30.450.20 78 182 1.3E-15 T 06-07-2017 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SUPERFAMILY SSF52540 206 440 1.65E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SMART SM00382 226 363 1.4E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 Gene3D G3DSA:1.10.10.60 450 507 3.4E-28 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS11485 217ac414860c2d14f533183c98993b58 513 SUPERFAMILY SSF55021 2 69 1.91E-5 T 06-07-2017 LFZ55_RS23585 7b51765e42103fb7f01519c95bc09074 201 SUPERFAMILY SSF55718 14 111 7.36E-6 T 06-07-2017 IPR003033 SCP2 sterol-binding domain LFZ55_RS23585 7b51765e42103fb7f01519c95bc09074 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 4.9E-21 T 06-07-2017 IPR003033 SCP2 sterol-binding domain LFZ55_RS04880 4b7a3a08f047453ea90428df2d412db6 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 208 7.6E-27 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS04880 4b7a3a08f047453ea90428df2d412db6 316 SUPERFAMILY SSF51735 1 311 7.06E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04880 4b7a3a08f047453ea90428df2d412db6 316 Gene3D G3DSA:3.90.25.10 182 293 7.3E-41 T 06-07-2017 LFZ55_RS04880 4b7a3a08f047453ea90428df2d412db6 316 Gene3D G3DSA:3.40.50.720 3 181 4.2E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 SUPERFAMILY SSF47413 1 59 3.52E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 Gene3D G3DSA:3.40.50.2300 169 306 2.5E-49 T 06-07-2017 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 SUPERFAMILY SSF53822 61 330 8.16E-78 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 Gene3D G3DSA:3.40.50.2300 58 168 1.1E-47 T 06-07-2017 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 Gene3D G3DSA:1.10.260.40 2 57 3.2E-26 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-20 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 SMART SM00354 1 71 1.5E-33 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS08315 8d5df8ba1b33a621ebc0799a9ef31710 340 Pfam PF13377 Periplasmic binding protein-like domain 169 329 8.0E-33 T 06-07-2017 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 Pfam PF02203 Tar ligand binding domain homologue 1 171 7.4E-47 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 SMART SM00319 44 180 5.7E-54 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 8.7E-91 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 513 3.3E-68 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 SMART SM00304 214 266 1.2E-13 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 SUPERFAMILY SSF58104 234 518 1.96E-77 T 06-07-2017 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 Pfam PF00672 HAMP domain 194 261 2.3E-15 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 SMART SM00283 267 514 2.4E-94 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 SUPERFAMILY SSF47170 39 178 9.68E-46 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 Gene3D G3DSA:1.20.120.30 35 178 8.1E-50 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS09840 b00fa81599d0fb2566eb433aae14c342 553 Gene3D G3DSA:1.10.287.950 282 486 1.8E-64 T 06-07-2017 LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 Gene3D G3DSA:3.40.50.300 2 228 4.2E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 Gene3D G3DSA:3.40.50.300 324 554 5.5E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 Pfam PF00005 ABC transporter 26 165 1.6E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 Pfam PF00005 ABC transporter 346 489 3.1E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 SUPERFAMILY SSF52540 5 228 1.88E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 SMART SM00382 32 266 3.7E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 SMART SM00382 354 535 9.8E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16535 3f3ff417773ea2657ab58fdeb60ac012 578 SUPERFAMILY SSF52540 324 549 7.07E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21125 9f9ca0deb1424032b23be74d80e28d7a 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 169 1.2E-22 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LFZ55_RS21125 9f9ca0deb1424032b23be74d80e28d7a 276 Gene3D G3DSA:3.20.20.190 17 230 2.9E-46 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS21125 9f9ca0deb1424032b23be74d80e28d7a 276 SUPERFAMILY SSF51695 15 264 1.21E-47 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 06-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 06-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 06-07-2017 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 06-07-2017 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF56553 53 178 1.45E-41 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.6E-23 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 06-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 06-07-2017 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 4.3E-113 T 06-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 SMART SM00662 23 234 3.0E-105 T 06-07-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS02165 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:2.170.120.12 58 177 5.0E-40 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 15 80 3.0E-4 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 139 348 8.2E-72 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 SUPERFAMILY SSF52540 84 353 6.86E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 SMART SM00382 151 332 2.5E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 426 6.8E-130 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS04940 c097ec1583a026791689b35b8e89276e 431 Gene3D G3DSA:3.40.50.300 115 394 5.5E-88 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 Gene3D G3DSA:3.40.50.720 395 531 4.3E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 PRINTS PR00335 TrkA potassium uptake protein signature 459 469 4.7E-7 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 PRINTS PR00335 TrkA potassium uptake protein signature 419 433 4.7E-7 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 PRINTS PR00335 TrkA potassium uptake protein signature 402 416 4.7E-7 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 PRINTS PR00335 TrkA potassium uptake protein signature 448 458 4.7E-7 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 SUPERFAMILY SSF51735 402 529 7.3E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 7.1E-93 T 06-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 Pfam PF00999 Sodium/hydrogen exchanger family 12 373 9.5E-68 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 46.618 T 06-07-2017 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 LFZ55_RS01940 d91eed203656a74812bd8f41ecb17f56 601 Pfam PF02254 TrkA-N domain 403 514 3.1E-25 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 493 54.893 T 06-07-2017 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 Pfam PF02541 Ppx/GppA phosphatase family 20 300 5.9E-100 T 06-07-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 Gene3D G3DSA:3.30.420.150 127 299 5.8E-51 T 06-07-2017 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 SUPERFAMILY SSF53067 131 299 2.16E-40 T 06-07-2017 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 Gene3D G3DSA:3.30.420.40 2 126 3.1E-44 T 06-07-2017 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 SUPERFAMILY SSF53067 6 127 2.07E-36 T 06-07-2017 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 PIRSF PIRSF001267 1 493 5.7E-182 T 06-07-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 LFZ55_RS23860 7e5400d7b608ef4cac46e5f75b9bcdf5 493 SUPERFAMILY SSF109604 306 492 1.26E-43 T 06-07-2017 LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 2.8E-11 T 06-07-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 SUPERFAMILY SSF52833 1 193 3.16E-65 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 Gene3D G3DSA:3.30.1020.10 160 193 1.8E-13 T 06-07-2017 LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 Gene3D G3DSA:3.40.30.10 4 159 7.4E-56 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 PIRSF PIRSF000239 1 198 8.7E-59 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS18425 4a191a264a411d4188c5c53052f3b5b5 200 Pfam PF00578 AhpC/TSA family 5 139 2.0E-34 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 Pfam PF00293 NUDIX domain 31 149 1.3E-19 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 Gene3D G3DSA:3.90.79.10 1 165 7.7E-45 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 1.0E-49 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 SUPERFAMILY SSF55811 4 167 1.25E-48 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 33.538 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 LFZ55_RS04170 660e8d6e6db92ee45eb2270fd3127737 181 PIRSF PIRSF018427 1 180 3.3E-55 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 Gene3D G3DSA:3.30.420.40 253 467 8.2E-35 T 06-07-2017 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.18 T 06-07-2017 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 5.9E-79 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 5 463 9.0E-232 T 06-07-2017 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 SUPERFAMILY SSF53067 253 466 2.27E-41 T 06-07-2017 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 1.1E-20 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 PIRSF PIRSF000538 3 470 1.1E-79 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 Gene3D G3DSA:3.30.420.40 1 250 9.0E-53 T 06-07-2017 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS04555 cf590d9615e5b62de9ecfb2a503c0b0a 472 SUPERFAMILY SSF53067 5 252 9.94E-59 T 06-07-2017 LFZ55_RS20195 3b07929fdb8b48c1ecdc156d516be70d 179 SUPERFAMILY SSF49401 29 179 2.24E-33 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS20195 3b07929fdb8b48c1ecdc156d516be70d 179 Gene3D G3DSA:2.60.40.1090 29 179 1.5E-38 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS20195 3b07929fdb8b48c1ecdc156d516be70d 179 Pfam PF00419 Fimbrial protein 31 178 1.6E-13 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.3E-6 T 06-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.7E-38 T 06-07-2017 IPR027398 SecD export protein N-terminal TM domain LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.628 T 06-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 Pfam PF02355 Protein export membrane protein 433 601 4.9E-15 T 06-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 Gene3D G3DSA:1.20.1640.10 446 606 9.7E-24 T 06-07-2017 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 SUPERFAMILY SSF82866 410 606 7.85E-40 T 06-07-2017 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 SUPERFAMILY SSF82866 338 349 7.85E-40 T 06-07-2017 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.1E-151 T 06-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LFZ55_RS18395 80f50a80233b42a226a86cef617f663f 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 1.5E-84 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.1E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 SUPERFAMILY SSF53850 89 295 1.02E-46 T 06-07-2017 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 Gene3D G3DSA:3.40.190.10 90 175 2.2E-19 T 06-07-2017 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 SUPERFAMILY SSF46785 1 85 1.56E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 Gene3D G3DSA:3.40.190.10 176 267 9.5E-38 T 06-07-2017 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 Pfam PF03466 LysR substrate binding domain 88 292 9.5E-54 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS22945 76a7ea3e59ebc61f9efed7d194705177 305 Gene3D G3DSA:1.10.10.10 1 84 4.3E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 SUPERFAMILY SSF89562 2 158 8.24E-44 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.954 T 06-07-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 Gene3D G3DSA:3.50.30.40 1 156 3.1E-45 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-62 T 06-07-2017 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 1.2E-90 T 06-07-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 LFZ55_RS23080 ae7a61db394c087eb8700239713890c4 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 6.9E-36 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS20325 8b370db9e32fd0a8362c35f3535303d8 21 Hamap MF_01907 Thr operon leader peptide [thrL]. 1 21 11.501 T 06-07-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 LFZ55_RS20325 8b370db9e32fd0a8362c35f3535303d8 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 5.4E-9 T 06-07-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 LFZ55_RS20325 8b370db9e32fd0a8362c35f3535303d8 21 Pfam PF08254 Threonine leader peptide 1 21 2.7E-8 T 06-07-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 242 1.9E-29 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 SUPERFAMILY SSF53067 6 245 4.73E-47 T 06-07-2017 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 Gene3D G3DSA:3.30.420.40 4 242 8.6E-27 T 06-07-2017 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 53.068 T 06-07-2017 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 SUPERFAMILY SSF53067 250 473 5.55E-31 T 06-07-2017 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 3.8E-25 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 Gene3D G3DSA:3.30.420.40 364 473 1.1E-13 T 06-07-2017 LFZ55_RS23200 06d737ec48ab0384a2b64fd6892f309a 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 3.4E-228 T 06-07-2017 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 LFZ55_RS01470 afeb8b49e47e802f53afc3a8c0c2c840 281 Gene3D G3DSA:1.10.3720.10 4 270 4.7E-50 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01470 afeb8b49e47e802f53afc3a8c0c2c840 281 SUPERFAMILY SSF161098 4 277 7.66E-57 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01470 afeb8b49e47e802f53afc3a8c0c2c840 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 3.6E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.406 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 PIRSF PIRSF000903 1 274 8.8E-125 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 Gene3D G3DSA:3.60.21.10 1 132 6.8E-55 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 Gene3D G3DSA:3.60.21.10 169 268 6.8E-55 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 151 2.7E-14 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 4.6E-165 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LFZ55_RS19955 cfdb659119c7d649e883798613646e28 282 SUPERFAMILY SSF56300 1 260 3.01E-57 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS06690 26b45f20faab20900bfbba35c05aa03d 160 Pfam PF10721 Protein of unknown function (DUF2514) 10 159 4.3E-42 T 06-07-2017 IPR019659 Protein of unknown function DUF2514 LFZ55_RS06565 26b45f20faab20900bfbba35c05aa03d 160 Pfam PF10721 Protein of unknown function (DUF2514) 10 159 4.3E-42 T 06-07-2017 IPR019659 Protein of unknown function DUF2514 LFZ55_RS10205 13bc1dcfef4ba1afa932eebb5332ff9b 396 Gene3D G3DSA:2.60.40.1090 224 395 9.0E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS02590 8250248cedfc88dbd2dd2abb4c66202e 242 Gene3D G3DSA:1.10.3810.10 62 231 1.7E-60 T 06-07-2017 LFZ55_RS02590 8250248cedfc88dbd2dd2abb4c66202e 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 42.98 T 06-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 LFZ55_RS02590 8250248cedfc88dbd2dd2abb4c66202e 242 SUPERFAMILY SSF53955 55 231 7.03E-62 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS02590 8250248cedfc88dbd2dd2abb4c66202e 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 12 231 3.7E-84 T 06-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 LFZ55_RS02590 8250248cedfc88dbd2dd2abb4c66202e 242 Pfam PF00912 Transglycosylase 59 227 1.5E-51 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 LFZ55_RS09075 8524eaae7e7fcabeea4b3c78d070e32f 319 Pfam PF03186 CobD/Cbib protein 7 297 6.2E-106 T 06-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 LFZ55_RS09075 8524eaae7e7fcabeea4b3c78d070e32f 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 298 2.0E-75 T 06-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 LFZ55_RS09075 8524eaae7e7fcabeea4b3c78d070e32f 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 107.591 T 06-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 SMART SM00883 2 95 1.8E-48 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 Gene3D G3DSA:2.30.33.40 2 96 1.9E-31 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 06-07-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.933 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 SUPERFAMILY SSF50129 1 96 1.65E-30 T 06-07-2017 IPR011032 GroES-like LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 6.0E-29 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS21880 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LFZ55_RS10735 b0e85e25f212ad04fd84152ebaff015d 426 SUPERFAMILY SSF103473 5 414 1.15E-27 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS10735 b0e85e25f212ad04fd84152ebaff015d 426 Gene3D G3DSA:1.20.1250.20 229 414 2.7E-11 T 06-07-2017 LFZ55_RS10735 b0e85e25f212ad04fd84152ebaff015d 426 Pfam PF07690 Major Facilitator Superfamily 26 318 6.9E-9 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS22040 97b76b66c6bf17984accf9ca79489a27 405 SUPERFAMILY SSF56954 4 403 1.96E-27 T 06-07-2017 LFZ55_RS22040 97b76b66c6bf17984accf9ca79489a27 405 Gene3D G3DSA:1.20.1600.10 23 402 2.5E-14 T 06-07-2017 LFZ55_RS22040 97b76b66c6bf17984accf9ca79489a27 405 Pfam PF02321 Outer membrane efflux protein 28 203 1.8E-6 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS01590 e4c8edf354b8a7d869b989be5d4d6217 108 SUPERFAMILY SSF52821 2 100 5.76E-28 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS01590 e4c8edf354b8a7d869b989be5d4d6217 108 Pfam PF00581 Rhodanese-like domain 8 98 2.0E-14 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS01590 e4c8edf354b8a7d869b989be5d4d6217 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 32.47 T 06-07-2017 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LFZ55_RS01590 e4c8edf354b8a7d869b989be5d4d6217 108 Gene3D G3DSA:3.40.250.10 2 99 6.0E-29 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS01590 e4c8edf354b8a7d869b989be5d4d6217 108 SMART SM00450 7 102 1.1E-18 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS07390 22090796a6cca8f45e57c1238b189671 124 Gene3D G3DSA:1.10.10.10 3 63 1.1E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07390 22090796a6cca8f45e57c1238b189671 124 SUPERFAMILY SSF46955 3 75 1.19E-13 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 SUPERFAMILY SSF81273 93 136 2.28E-12 T 06-07-2017 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 Gene3D G3DSA:4.10.430.10 92 136 4.7E-26 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 06-07-2017 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 Gene3D G3DSA:1.10.287.1050 1 58 4.4E-32 T 06-07-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 Pfam PF00816 H-NS histone family 32 127 1.3E-20 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 SMART SM00528 87 135 2.7E-25 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LFZ55_RS11010 f67943ca4237c6d0d85e750eacd77bae 137 PIRSF PIRSF002096 1 135 3.2E-57 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 Gene3D G3DSA:3.40.30.10 1 83 1.5E-25 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 SUPERFAMILY SSF52833 1 84 1.12E-19 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 197 4.7E-13 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 SUPERFAMILY SSF47616 78 203 1.27E-34 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 83 7.8E-11 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS07515 7b014cd882853ebbd8d368f6a1594cef 215 Gene3D G3DSA:1.20.1050.10 84 200 5.5E-49 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 Gene3D G3DSA:3.10.580.10 267 306 5.7E-5 T 06-07-2017 LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 Gene3D G3DSA:3.40.50.300 1 235 1.1E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 SUPERFAMILY SSF54631 267 306 7.34E-7 T 06-07-2017 LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 SMART SM00382 26 212 2.9E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 SUPERFAMILY SSF52540 1 239 2.93E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 Pfam PF00005 ABC transporter 18 162 4.2E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08455 dcc34f7c7bb477179ddb94175a64f241 315 Pfam PF00571 CBS domain 267 306 2.1E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 34.722 T 06-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 Gene3D G3DSA:3.40.50.2000 4 196 1.3E-76 T 06-07-2017 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.3E-48 T 06-07-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 325 8.5E-36 T 06-07-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 Gene3D G3DSA:3.40.50.2000 254 335 2.5E-5 T 06-07-2017 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.1E-111 T 06-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19735 a96558e3aafc6d22df0d788af8a07d8c 355 SUPERFAMILY SSF53756 6 353 1.96E-129 T 06-07-2017 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.6E-32 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 Gene3D G3DSA:3.40.50.720 173 287 3.3E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.2E-27 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.951 T 06-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 Gene3D G3DSA:3.90.180.10 1 172 4.2E-51 T 06-07-2017 IPR011032 GroES-like LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 SUPERFAMILY SSF51735 141 305 5.71E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 SMART SM00829 12 338 3.5E-5 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 SUPERFAMILY SSF50129 1 173 7.91E-54 T 06-07-2017 IPR011032 GroES-like LFZ55_RS00700 fdf5847316e16d7eceaebe84dd42e3f1 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.1E-188 T 06-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:3.40.50.150 1157 1289 1.9E-11 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:1.10.1200.10 1413 1476 6.7E-21 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-12 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.4E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF52777 1669 1908 8.0E-41 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF52777 296 536 1.56E-37 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF08242 Methyltransferase domain 1182 1279 1.5E-7 T 06-07-2017 IPR013217 Methyltransferase type 12 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 4.3E-16 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF53335 1162 1323 2.78E-15 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:2.30.38.10 880 956 7.9E-23 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF56801 1344 1422 2.49E-137 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF56801 548 1018 2.49E-137 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF47336 21 124 6.91E-9 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 2.9E-118 T 06-07-2017 IPR010071 Amino acid adenylation domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00668 Condensation domain 1495 1778 7.2E-36 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00668 Condensation domain 112 409 2.1E-69 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00501 AMP-binding enzyme 575 965 3.5E-90 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF52777 1489 1680 7.45E-20 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:3.30.300.30 1349 1412 2.5E-30 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:3.30.300.30 962 1014 2.5E-30 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:3.40.50.980 568 715 9.2E-34 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.17 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 3.3E-9 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 9.6E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.1E-8 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 Gene3D G3DSA:3.40.50.980 716 872 1.0E-41 T 06-07-2017 LFZ55_RS10710 3ee3e913b549de97b239f9a851a51f63 2035 SUPERFAMILY SSF52777 117 289 6.0E-17 T 06-07-2017 LFZ55_RS18905 06144266d2e2b77b606c2bce681059ac 72 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 4 72 2.4E-13 T 06-07-2017 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 LFZ55_RS18905 06144266d2e2b77b606c2bce681059ac 72 SUPERFAMILY SSF140129 3 68 2.35E-13 T 06-07-2017 LFZ55_RS18905 06144266d2e2b77b606c2bce681059ac 72 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 4 72 1.9E-14 T 06-07-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 SUPERFAMILY SSF52540 9 239 5.06E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 1.9E-22 T 06-07-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Gene3D G3DSA:3.40.50.300 318 548 1.7E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Gene3D G3DSA:3.40.50.300 2 270 1.7E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 SUPERFAMILY SSF52540 311 501 5.66E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 SMART SM00382 344 514 4.3E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 SMART SM00382 28 230 8.6E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Pfam PF00005 ABC transporter 336 469 2.0E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Pfam PF00005 ABC transporter 19 185 4.9E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15590 0dd4e3f3b09ac01acfda806e6409faa0 635 Pfam PF12848 ABC transporter 224 297 7.9E-12 T 06-07-2017 IPR032781 ABC-transporter extension domain LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 SUPERFAMILY SSF52540 164 371 1.86E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 171 179 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Pfam PF00270 DEAD/DEAH box helicase 48 212 1.9E-51 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Pfam PF12343 Cold shock protein DEAD box A 585 646 3.6E-11 T 06-07-2017 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 SMART SM00490 276 357 1.5E-31 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Pfam PF03880 DbpA RNA binding domain 506 575 2.1E-20 T 06-07-2017 IPR005580 DbpA, RNA-binding domain LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 18 577 47.284 T 06-07-2017 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Gene3D G3DSA:3.40.50.300 230 392 3.0E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 SUPERFAMILY SSF52540 9 226 4.34E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 SMART SM00487 42 240 3.0E-64 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Pfam PF00271 Helicase conserved C-terminal domain 249 357 1.5E-28 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS02820 2df6fa98bac8ac32fd155819ee792791 646 Gene3D G3DSA:3.40.50.300 17 229 1.8E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 PIRSF PIRSF005461 1 208 1.5E-82 T 06-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.5E-58 T 06-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.8E-97 T 06-07-2017 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 SUPERFAMILY SSF53335 31 207 2.01E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.794 T 06-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LFZ55_RS02735 58d78d4cc4f79ba59ad1cf5a78d423f4 208 Gene3D G3DSA:3.40.50.150 1 208 1.3E-73 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03575 4036ee8a35f644ddc3ac9b66388598b8 421 Gene3D G3DSA:2.40.160.10 31 396 8.0E-19 T 06-07-2017 IPR023614 Porin domain LFZ55_RS03575 4036ee8a35f644ddc3ac9b66388598b8 421 Pfam PF03573 outer membrane porin, OprD family 33 390 1.0E-6 T 06-07-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LFZ55_RS02445 3a5645b74152ad221e7fcb45f370fd0b 88 Gene3D G3DSA:3.30.1660.10 22 88 3.9E-28 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS02445 3a5645b74152ad221e7fcb45f370fd0b 88 SUPERFAMILY SSF159871 3 88 7.85E-25 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS02445 3a5645b74152ad221e7fcb45f370fd0b 88 Pfam PF07338 Protein of unknown function (DUF1471) 35 88 6.0E-23 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS11965 fdf69456f65850b896dc2cf10b5c62cd 296 SUPERFAMILY SSF141571 156 257 1.57E-25 T 06-07-2017 LFZ55_RS11965 fdf69456f65850b896dc2cf10b5c62cd 296 Pfam PF13599 Pentapeptide repeats (9 copies) 182 252 6.9E-10 T 06-07-2017 IPR001646 Pentapeptide repeat LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 SUPERFAMILY SSF109604 172 235 4.59E-7 T 06-07-2017 LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 SUPERFAMILY SSF109604 80 142 4.59E-7 T 06-07-2017 LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 Pfam PF07514 Putative helicase 24 336 6.8E-107 T 06-07-2017 IPR011119 Uncharacterised domain, helicase/relaxase, putative LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 23 240 3.2E-78 T 06-07-2017 IPR022391 Integrating conjugative element relaxase, PFGI-1 class LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 SMART SM00471 86 246 0.0018 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 SUPERFAMILY SSF46785 406 527 3.81E-37 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 Gene3D G3DSA:2.40.10.200 426 528 3.3E-13 T 06-07-2017 LFZ55_RS21150 571d02f097b1fe8f20a79a8dcf55bc0f 536 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 409 526 3.5E-41 T 06-07-2017 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal LFZ55_RS10090 f1617afa0c06b38103b315401d08e723 284 Gene3D G3DSA:3.30.420.10 117 276 9.2E-38 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10090 f1617afa0c06b38103b315401d08e723 284 Pfam PF00665 Integrase core domain 124 237 2.4E-31 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS10090 f1617afa0c06b38103b315401d08e723 284 Pfam PF13276 HTH-like domain 43 96 8.5E-13 T 06-07-2017 IPR025948 HTH-like domain LFZ55_RS10090 f1617afa0c06b38103b315401d08e723 284 SUPERFAMILY SSF53098 116 280 2.28E-41 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 2.0E-48 T 06-07-2017 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 Gene3D G3DSA:1.10.357.10 68 204 4.2E-19 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-16 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 SUPERFAMILY SSF46689 2 64 4.26E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 Gene3D G3DSA:1.10.10.60 2 62 1.7E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 SUPERFAMILY SSF48498 84 203 1.48E-16 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.4E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS02300 bcc19f15bc192f25dc453074f500017f 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.4E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS11425 b5452e93b95318716c030e6083acdef8 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 282 9.7E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11425 b5452e93b95318716c030e6083acdef8 293 SUPERFAMILY SSF161098 57 282 4.06E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11425 b5452e93b95318716c030e6083acdef8 293 Gene3D G3DSA:1.10.3720.10 12 284 1.4E-58 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 Gene3D G3DSA:1.10.150.240 17 81 1.9E-35 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 Gene3D G3DSA:3.40.50.1000 83 196 1.4E-34 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 Gene3D G3DSA:3.40.50.1000 3 16 1.4E-34 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 SUPERFAMILY SSF56784 3 194 8.42E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 184 8.4E-19 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 6.3E-8 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.3E-8 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.3E-8 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.3E-8 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS23340 80b44f42b8160dcd220df755cecf8599 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 46 184 1.8E-11 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS15325 31642873590c6dba6e560f618cf6b266 634 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 358 7.6E-19 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS15325 31642873590c6dba6e560f618cf6b266 634 SUPERFAMILY SSF52540 257 365 2.01E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15325 31642873590c6dba6e560f618cf6b266 634 SUPERFAMILY SSF52540 1 207 2.01E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15325 31642873590c6dba6e560f618cf6b266 634 Gene3D G3DSA:3.40.50.300 1 381 2.3E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07065 0eb598ec74438087163fc27017f28d66 169 Gene3D G3DSA:2.70.70.10 14 167 5.7E-61 T 06-07-2017 LFZ55_RS07065 0eb598ec74438087163fc27017f28d66 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.5E-51 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS07065 0eb598ec74438087163fc27017f28d66 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS07065 0eb598ec74438087163fc27017f28d66 169 SUPERFAMILY SSF51261 12 167 2.09E-56 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS07065 0eb598ec74438087163fc27017f28d66 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.3E-49 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 SUPERFAMILY SSF56176 344 429 3.0E-24 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 Pfam PF00571 CBS domain 284 333 0.0024 T 06-07-2017 IPR000644 CBS domain LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 SUPERFAMILY SSF54631 200 335 1.94E-21 T 06-07-2017 LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 Pfam PF03471 Transporter associated domain 347 425 1.5E-22 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 Pfam PF01595 Domain of unknown function DUF21 6 197 3.0E-38 T 06-07-2017 IPR002550 Domain of unknown function DUF21 LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 SMART SM01091 346 426 2.5E-30 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 Gene3D G3DSA:3.10.580.10 198 334 2.2E-13 T 06-07-2017 LFZ55_RS21500 4e324f10876c75cdb39f05b4492e8485 447 Gene3D G3DSA:3.30.465.10 342 425 6.4E-29 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 SUPERFAMILY SSF55424 336 450 1.01E-36 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 4.1E-35 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Gene3D G3DSA:3.50.50.60 3 143 3.5E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Gene3D G3DSA:3.30.390.30 338 450 7.3E-45 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Gene3D G3DSA:3.50.50.60 248 333 1.5E-25 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.0E-218 T 06-07-2017 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.4E-29 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.4E-29 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.4E-29 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.4E-29 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-29 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Gene3D G3DSA:3.50.50.60 146 247 6.9E-31 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 7.2E-67 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 1.0E-69 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 PIRSF PIRSF000350 1 447 9.6E-87 T 06-07-2017 LFZ55_RS01210 52f40fb1a4a6406878dde128f6931c56 450 SUPERFAMILY SSF51905 1 365 9.07E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 SUPERFAMILY SSF48008 98 227 3.66E-24 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 Pfam PF07729 FCD domain 99 218 4.4E-25 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 Gene3D G3DSA:1.20.120.530 93 227 5.0E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 Gene3D G3DSA:1.10.10.10 5 74 1.4E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 7.8E-14 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 SMART SM00345 9 68 3.0E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 SMART SM00895 97 220 4.2E-17 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS00060 98f2f4e3f01bb9f5d814c831596977d2 229 SUPERFAMILY SSF46785 4 72 8.95E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 Gene3D G3DSA:3.30.70.1250 114 235 2.2E-53 T 06-07-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 Gene3D G3DSA:3.40.720.10 240 407 2.1E-73 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 Gene3D G3DSA:3.40.720.10 1 113 2.1E-73 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 PIRSF PIRSF001491 1 407 3.4E-164 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.4E-44 T 06-07-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 SUPERFAMILY SSF143856 117 235 3.4E-50 T 06-07-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.511 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 SUPERFAMILY SSF53649 1 114 2.49E-69 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 SUPERFAMILY SSF53649 236 407 2.49E-69 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20440 8ee57b5f2009487bace9de5ab414a135 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 5.1E-202 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 Pfam PF00294 pfkB family carbohydrate kinase 92 381 4.4E-65 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS01510 39c6639814798c216c400970efc51787 404 Gene3D G3DSA:3.40.1190.20 91 395 3.7E-81 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS01510 39c6639814798c216c400970efc51787 404 SUPERFAMILY SSF46785 4 57 2.92E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 4.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 4.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00990 Ribokinase signature 308 319 1.5E-26 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00990 Ribokinase signature 196 209 1.5E-26 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00990 Ribokinase signature 96 117 1.5E-26 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00990 Ribokinase signature 123 142 1.5E-26 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 PRINTS PR00990 Ribokinase signature 264 279 1.5E-26 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 337 350 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 Hamap MF_01987 Ribokinase [rbsK]. 92 392 21.271 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 Gene3D G3DSA:1.10.10.10 3 54 1.8E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01510 39c6639814798c216c400970efc51787 404 SUPERFAMILY SSF53613 94 381 1.29E-74 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS01510 39c6639814798c216c400970efc51787 404 SMART SM00420 5 57 1.6E-12 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01510 39c6639814798c216c400970efc51787 404 Pfam PF08220 DeoR-like helix-turn-helix domain 5 55 8.0E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 49.369 T 06-07-2017 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 06-07-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 Pfam PF00210 Ferritin-like domain 31 166 9.8E-22 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 Gene3D G3DSA:1.20.1260.10 2 167 3.1E-54 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 SUPERFAMILY SSF47240 10 167 3.87E-50 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 06-07-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LFZ55_RS16470 78e160d791da931f56fef254ee535766 167 PIRSF PIRSF005900 8 167 2.0E-43 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LFZ55_RS13875 38adc6e88f89f4c9129b20fd441a53e9 212 Pfam PF01810 LysE type translocator 18 209 3.6E-53 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS13875 38adc6e88f89f4c9129b20fd441a53e9 212 PIRSF PIRSF006324 4 212 3.7E-60 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 SUPERFAMILY SSF51246 278 353 1.49E-19 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 SUPERFAMILY SSF52440 2 76 7.48E-16 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 8.4E-111 T 06-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 Pfam PF02222 ATP-grasp domain 88 254 5.5E-53 T 06-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 SUPERFAMILY SSF56059 79 274 1.48E-56 T 06-07-2017 LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 Gene3D G3DSA:3.40.50.20 1 69 2.0E-24 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.993 T 06-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LFZ55_RS17875 e9f05a96beffc2a286110b2b061d3147 355 Gene3D G3DSA:3.30.470.20 119 354 7.3E-81 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 161.95 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 SUPERFAMILY SSF53067 5 191 2.53E-64 T 06-07-2017 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 Gene3D G3DSA:3.30.420.40 201 391 5.0E-72 T 06-07-2017 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 SUPERFAMILY SSF53067 153 392 5.26E-86 T 06-07-2017 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 199 220 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 296 309 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 374 386 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 318 334 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 169 182 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PRINTS PR00471 Acetate kinase family signature 7 18 2.6E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 PIRSF PIRSF000722 3 396 2.8E-132 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 Pfam PF00871 Acetokinase family 7 386 1.9E-159 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 Gene3D G3DSA:3.30.420.40 7 200 2.2E-11 T 06-07-2017 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 72.402 T 06-07-2017 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 LFZ55_RS03005 0f1925ead2cca77298ffa9614b542f27 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 393 6.9E-164 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 SMART SM00382 27 214 2.8E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 Gene3D G3DSA:3.40.50.300 1 215 3.0E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.3E-92 T 06-07-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 Pfam PF00005 ABC transporter 18 165 6.3E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01410 49d36c438b761d143080bd26d1c60915 222 SUPERFAMILY SSF52540 1 216 3.59E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10480 bed66fe71b9ffa40510b6ec070c051fb 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 208 2.6E-51 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS10480 bed66fe71b9ffa40510b6ec070c051fb 219 SUPERFAMILY SSF56529 11 211 1.96E-67 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS10480 bed66fe71b9ffa40510b6ec070c051fb 219 Gene3D G3DSA:3.90.850.10 14 218 8.4E-77 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS23370 eed960d8cbaf11aff3a3ce73dd808868 295 SUPERFAMILY SSF74650 7 290 3.01E-63 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS23370 eed960d8cbaf11aff3a3ce73dd808868 295 Gene3D G3DSA:2.70.98.10 6 289 1.3E-46 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS23370 eed960d8cbaf11aff3a3ce73dd808868 295 Pfam PF01263 Aldose 1-epimerase 7 285 4.1E-51 T 06-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 Gene3D G3DSA:3.40.250.10 152 278 1.5E-40 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 06-07-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 SMART SM00450 155 275 3.4E-23 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 SMART SM00450 7 132 4.9E-24 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 SUPERFAMILY SSF52821 165 278 2.23E-32 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 Gene3D G3DSA:3.40.250.10 2 151 3.4E-44 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 06-07-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 SUPERFAMILY SSF52821 3 151 6.02E-38 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 Pfam PF00581 Rhodanese-like domain 9 128 7.9E-17 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS06215 4035e02627ced6c206a7ec00c3a040aa 280 Pfam PF00581 Rhodanese-like domain 165 270 1.5E-11 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.2E-17 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 3 77 8.4E-37 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS14285 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Gene3D G3DSA:3.40.50.2300 5 126 1.7E-38 T 06-07-2017 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Pfam PF00158 Sigma-54 interaction domain 141 308 1.6E-72 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 SUPERFAMILY SSF46689 397 440 1.25E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Pfam PF00072 Response regulator receiver domain 8 117 3.8E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Gene3D G3DSA:1.10.10.60 398 440 1.5E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Gene3D G3DSA:1.10.8.60 314 390 1.0E-28 T 06-07-2017 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 SMART SM00448 6 117 6.4E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 SUPERFAMILY SSF52540 141 385 6.6E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 SUPERFAMILY SSF52172 5 185 4.7E-47 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.2E-15 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 SMART SM00382 161 304 1.7E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 2.9E-12 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.9E-12 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS22710 683281b0da80fcde291e2c53403a983d 441 Gene3D G3DSA:3.40.50.300 139 313 1.6E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 Pfam PF02510 Surface presentation of antigens protein 1 336 4.4E-211 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 264 275 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 125 139 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 281 294 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 84 94 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 33 50 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 2 12 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 68 79 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 154 166 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 199 210 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 16 26 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 171 182 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 231 243 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 297 309 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PRINTS PR01306 Salmonella invasion protein InvJ signature 101 114 2.1E-103 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 ProDom PD004696 SPAN PRESENTATION ANTIGENS SURFACE PROTEINS VIRULENCE ANTIGEN SECRETORY TYPE WITH 1 317 0.0 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS04950 6fa810b71577695f9889e92d166e1dfa 336 PIRSF PIRSF020738 1 336 8.5E-185 T 06-07-2017 IPR003066 Salmonella invasion protein InvJ LFZ55_RS24275 908bce81ad50abe2669ad606704359b8 388 SUPERFAMILY SSF52540 21 369 6.74E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24275 908bce81ad50abe2669ad606704359b8 388 Pfam PF00437 Type II/IV secretion system protein 29 280 2.2E-27 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS24275 908bce81ad50abe2669ad606704359b8 388 TIGRFAM TIGR02525 plasmid_TraJ: plasmid transfer ATPase TraJ 8 377 6.6E-121 T 06-07-2017 IPR013364 ATPase, plasmid transfer, TraJ LFZ55_RS24275 908bce81ad50abe2669ad606704359b8 388 Gene3D G3DSA:3.40.50.300 133 373 2.6E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17630 70ed09e9e953e8cc0b93970683685285 72 Pfam PF03621 MbtH-like protein 4 54 1.6E-20 T 06-07-2017 IPR005153 MbtH-like protein LFZ55_RS17630 70ed09e9e953e8cc0b93970683685285 72 SMART SM00923 5 55 4.3E-22 T 06-07-2017 IPR005153 MbtH-like protein LFZ55_RS17630 70ed09e9e953e8cc0b93970683685285 72 SUPERFAMILY SSF160582 3 69 5.75E-23 T 06-07-2017 LFZ55_RS17630 70ed09e9e953e8cc0b93970683685285 72 Gene3D G3DSA:3.90.820.10 12 70 1.0E-22 T 06-07-2017 LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 PIRSF PIRSF038996 1 172 2.0E-54 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 3.8E-68 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 SUPERFAMILY SSF52218 1 168 4.66E-45 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 06-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 Gene3D G3DSA:3.40.50.360 1 168 9.4E-55 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04140 349384e91642138b30d12936fb73610a 173 Pfam PF00258 Flavodoxin 5 160 1.5E-26 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SMART SM00493 259 330 1.7E-17 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 415 4.4E-151 T 06-07-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SMART SM00766 450 575 2.3E-47 T 06-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Gene3D G3DSA:3.90.580.10 1 101 2.7E-41 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Gene3D G3DSA:3.40.1360.10 241 367 6.8E-47 T 06-07-2017 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SMART SM00400 36 90 1.2E-38 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 423 8.5E-8 T 06-07-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SUPERFAMILY SSF117023 447 578 8.11E-42 T 06-07-2017 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Pfam PF13155 Toprim-like 263 348 1.2E-14 T 06-07-2017 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SUPERFAMILY SSF57783 4 100 3.91E-36 T 06-07-2017 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Gene3D G3DSA:1.10.860.10 436 580 6.7E-53 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Pfam PF01807 CHC2 zinc finger 7 100 3.0E-41 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 9.1E-32 T 06-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Gene3D G3DSA:1.20.50.20 368 426 2.0E-22 T 06-07-2017 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Gene3D G3DSA:3.90.980.10 116 240 6.0E-49 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 2.0E-44 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 29.958 T 06-07-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LFZ55_RS03180 18114362dd56899838e1ca8a6609a1c4 581 SUPERFAMILY SSF56731 116 427 2.88E-113 T 06-07-2017 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 3.7E-60 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.8E-135 T 06-07-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 06-07-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 Gene3D G3DSA:3.40.50.720 1 158 3.0E-78 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 SUPERFAMILY SSF51735 3 166 2.84E-67 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 Gene3D G3DSA:3.30.360.10 159 314 1.4E-87 T 06-07-2017 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 SMART SM00846 3 150 1.3E-95 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 PIRSF PIRSF000149 1 331 2.7E-137 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.1E-72 T 06-07-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS13750 6b5b65a6db3986ed55f948552e856dfd 331 SUPERFAMILY SSF55347 149 312 2.43E-82 T 06-07-2017 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 Pfam PF00463 Isocitrate lyase family 256 434 2.7E-50 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 Pfam PF00463 Isocitrate lyase family 8 255 1.7E-61 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 Gene3D G3DSA:3.20.20.60 4 417 7.4E-173 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 SUPERFAMILY SSF51621 4 417 5.83E-158 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 06-07-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 2.9E-93 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 1.1E-121 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 LFZ55_RS22660 b2796bf290fdfa7f6e662e55bb28ecea 434 PIRSF PIRSF001362 1 434 4.7E-230 T 06-07-2017 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 SUPERFAMILY SSF52540 1 240 3.93E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.0E-206 T 06-07-2017 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 Gene3D G3DSA:3.30.70.260 238 343 9.0E-32 T 06-07-2017 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 Pfam PF00005 ABC transporter 21 169 2.6E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 Pfam PF09383 NIL domain 268 339 1.6E-19 T 06-07-2017 IPR018449 NIL domain LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 Gene3D G3DSA:3.40.50.300 1 237 4.1E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 SMART SM00930 265 340 3.9E-24 T 06-07-2017 IPR018449 NIL domain LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 SUPERFAMILY SSF55021 248 343 1.26E-25 T 06-07-2017 LFZ55_RS19155 18e1e66ea84ed25cea5eaac3241a0d81 343 SMART SM00382 30 218 1.9E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 SUPERFAMILY SSF51717 6 274 1.05E-104 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 Gene3D G3DSA:3.20.20.20 12 274 6.9E-110 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 4.4E-102 T 06-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 Pfam PF00809 Pterin binding enzyme 18 257 5.3E-89 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS02750 08447c5fbbcaa6d796fb04b7c3672d73 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS21080 0cbec3331324421f9843a6933d231438 290 PIRSF PIRSF030850 1 290 7.6E-113 T 06-07-2017 IPR011396 Uncharacterised conserved protein UCP030850 LFZ55_RS21080 0cbec3331324421f9843a6933d231438 290 Pfam PF13391 HNH endonuclease 182 236 1.6E-6 T 06-07-2017 IPR003615 HNH nuclease LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 PIRSF PIRSF001434 1 384 1.0E-131 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 1.2E-211 T 06-07-2017 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 5.8E-142 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 Gene3D G3DSA:3.90.1150.10 248 383 4.5E-48 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 SUPERFAMILY SSF53383 5 381 2.48E-118 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS23025 a1e01c464debb8b63344369381ee5c5e 386 Gene3D G3DSA:3.40.640.10 5 246 1.2E-88 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.8E-10 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.8E-10 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.8E-10 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.8E-10 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 1.1E-237 T 06-07-2017 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 1.9E-99 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 3.6E-23 T 06-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.9E-54 T 06-07-2017 LFZ55_RS07680 ce65d97946caf018e9c60fc9a802a546 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.9E-54 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SUPERFAMILY SSF56024 41 114 2.92E-24 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SUPERFAMILY SSF56024 227 320 2.92E-24 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 Gene3D G3DSA:3.30.870.10 502 541 6.9E-10 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 Gene3D G3DSA:3.30.870.10 365 453 6.9E-10 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 Gene3D G3DSA:3.30.870.10 43 105 2.6E-22 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 Gene3D G3DSA:3.30.870.10 189 320 2.6E-22 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SUPERFAMILY SSF56024 462 558 9.74E-16 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SUPERFAMILY SSF56024 357 406 9.74E-16 T 06-07-2017 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SMART SM00155 231 263 14.0 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS15270 4bfe694b583997577ff157c58e5766e8 611 SMART SM00155 501 528 0.012 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 SUPERFAMILY SSF55120 78 322 3.7E-77 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 2.0E-108 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 SMART SM00363 18 83 1.5E-12 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 SUPERFAMILY SSF55174 17 69 1.16E-11 T 06-07-2017 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 Pfam PF01479 S4 domain 18 65 1.5E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.1E-30 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS05845 5593e68fd8f2d9363735fce8d7656582 326 Gene3D G3DSA:3.10.290.10 18 69 3.1E-13 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 Pfam PF12404 Peptidase 5 81 1.1E-32 T 06-07-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 SUPERFAMILY SSF53187 107 426 1.6E-102 T 06-07-2017 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.2E-99 T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 Gene3D G3DSA:3.40.630.10 97 426 1.5E-116 T 06-07-2017 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.1E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.1E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.1E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.1E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.1E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 PIRSF PIRSF036388 1 427 1.3E-233 T 06-07-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 LFZ55_RS06200 2dc727bd455cca5994e7202c6acd7ed2 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LFZ55_RS05435 be1334c7a94bb8f7df55bff73ac5ad41 175 SUPERFAMILY SSF52821 2 154 4.45E-30 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS05435 be1334c7a94bb8f7df55bff73ac5ad41 175 Pfam PF11127 Protein of unknown function (DUF2892) 115 172 5.1E-10 T 06-07-2017 IPR021309 Protein of unknown function DUF2892 LFZ55_RS05435 be1334c7a94bb8f7df55bff73ac5ad41 175 SMART SM00450 6 102 2.4E-17 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS05435 be1334c7a94bb8f7df55bff73ac5ad41 175 Pfam PF00581 Rhodanese-like domain 8 99 2.0E-14 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS05435 be1334c7a94bb8f7df55bff73ac5ad41 175 Gene3D G3DSA:3.40.250.10 4 110 2.1E-23 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS12640 844388b0f37d8929a9f6d92780407980 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 6.4E-39 T 06-07-2017 IPR017704 Putative selenium-binding protein YdfZ LFZ55_RS12640 844388b0f37d8929a9f6d92780407980 67 Pfam PF14001 YdfZ protein 2 65 6.3E-34 T 06-07-2017 IPR017704 Putative selenium-binding protein YdfZ LFZ55_RS01805 1d3c3bc1c85b781ae4cbe40a94002ba1 269 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site LFZ55_RS01805 1d3c3bc1c85b781ae4cbe40a94002ba1 269 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 4.8E-83 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LFZ55_RS01805 1d3c3bc1c85b781ae4cbe40a94002ba1 269 Gene3D G3DSA:1.20.1080.10 24 249 1.3E-60 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS01805 1d3c3bc1c85b781ae4cbe40a94002ba1 269 Pfam PF01226 Formate/nitrite transporter 20 247 5.8E-57 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LFZ55_RS01805 1d3c3bc1c85b781ae4cbe40a94002ba1 269 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 SUPERFAMILY SSF55681 73 268 1.18E-57 T 06-07-2017 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.7E-11 T 06-07-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Pfam PF08279 HTH domain 10 58 2.9E-11 T 06-07-2017 IPR013196 Helix-turn-helix, type 11 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.241 T 06-07-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 7.6E-28 T 06-07-2017 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Gene3D G3DSA:1.10.10.10 1 63 2.6E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Gene3D G3DSA:3.30.930.10 75 269 5.4E-58 T 06-07-2017 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 8.7E-84 T 06-07-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 SUPERFAMILY SSF46785 5 60 2.51E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.8E-24 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 Gene3D G3DSA:2.30.30.100 271 319 2.8E-24 T 06-07-2017 LFZ55_RS22875 174db1bb60017f3ec7f095805968bd66 320 SUPERFAMILY SSF50037 271 317 7.78E-11 T 06-07-2017 IPR008988 Transcriptional repressor, C-terminal LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 SUPERFAMILY SSF51735 9 252 2.15E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 Gene3D G3DSA:3.40.50.720 6 252 2.1E-80 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.4E-55 T 06-07-2017 LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.7E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.7E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.7E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS04335 455d51c4bb178d0b1ee7cd2a4ceac46e 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 8.9E-136 T 06-07-2017 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 LFZ55_RS13280 050a832450d3612e265a4324fcd998a2 319 Pfam PF04463 Protein of unknown function (DUF523) 7 149 1.2E-35 T 06-07-2017 IPR007553 Domain of unknown function DUF523 LFZ55_RS13280 050a832450d3612e265a4324fcd998a2 319 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 3.4E-39 T 06-07-2017 IPR013560 Domain of unknown function DUF1722 LFZ55_RS13280 050a832450d3612e265a4324fcd998a2 319 PIRSF PIRSF037004 1 318 2.7E-130 T 06-07-2017 IPR017087 Uncharacterised conserved protein UCP037004 LFZ55_RS05695 9166e930fa9b6cf2fe05c22bf77c4dc0 395 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 4.4E-16 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS05695 9166e930fa9b6cf2fe05c22bf77c4dc0 395 Gene3D G3DSA:1.10.443.10 214 383 1.5E-25 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS05695 9166e930fa9b6cf2fe05c22bf77c4dc0 395 Pfam PF00589 Phage integrase family 213 376 1.6E-27 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS05695 9166e930fa9b6cf2fe05c22bf77c4dc0 395 SUPERFAMILY SSF56349 107 386 1.09E-59 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS05695 9166e930fa9b6cf2fe05c22bf77c4dc0 395 Gene3D G3DSA:1.10.150.130 107 203 1.0E-15 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 Gene3D G3DSA:3.40.350.10 1 117 4.0E-19 T 06-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 121 1.0E-14 T 06-07-2017 IPR000587 Creatinase, N-terminal GO:0016787 LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 Pfam PF00557 Metallopeptidase family M24 135 341 1.8E-64 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 SUPERFAMILY SSF55920 127 354 4.58E-76 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 SUPERFAMILY SSF53092 7 121 1.74E-13 T 06-07-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal LFZ55_RS07215 7d13faa05ce5634563a33ed877cb9f58 360 Gene3D G3DSA:3.90.230.10 127 354 2.9E-81 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS19615 368dbddbc6401896e26a32f0752c13fc 316 Gene3D G3DSA:2.115.10.20 3 313 1.3E-95 T 06-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LFZ55_RS19615 368dbddbc6401896e26a32f0752c13fc 316 Pfam PF04616 Glycosyl hydrolases family 43 5 306 3.8E-76 T 06-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LFZ55_RS19615 368dbddbc6401896e26a32f0752c13fc 316 PIRSF PIRSF025414 1 316 1.1E-139 T 06-07-2017 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 LFZ55_RS19615 368dbddbc6401896e26a32f0752c13fc 316 SUPERFAMILY SSF75005 5 311 1.12E-66 T 06-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LFZ55_RS18780 053be9a43ecb3d786a373f05da977369 354 SUPERFAMILY SSF49401 204 354 9.94E-19 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS18780 053be9a43ecb3d786a373f05da977369 354 Gene3D G3DSA:2.60.40.1090 203 354 3.3E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18780 053be9a43ecb3d786a373f05da977369 354 Pfam PF00419 Fimbrial protein 204 353 2.8E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 SUPERFAMILY SSF55729 254 418 1.55E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.186 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 PIRSF PIRSF000423 1 442 8.8E-209 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 Pfam PF00696 Amino acid kinase family 26 268 1.4E-31 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 Gene3D G3DSA:3.40.630.30 294 440 8.0E-40 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 4.9E-197 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 SUPERFAMILY SSF53633 5 291 3.07E-68 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 Gene3D G3DSA:3.40.1160.10 24 291 3.1E-69 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS04480 1aa6f777cdf4157ce987d3796da01c17 443 Pfam PF00583 Acetyltransferase (GNAT) family 342 414 9.9E-8 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS14540 85c46a2c7a591ece9c3a41ea8b12d776 179 SMART SM00506 4 137 1.1E-60 T 06-07-2017 IPR002589 Macro domain LFZ55_RS14540 85c46a2c7a591ece9c3a41ea8b12d776 179 Gene3D G3DSA:3.40.220.10 3 174 3.5E-73 T 06-07-2017 LFZ55_RS14540 85c46a2c7a591ece9c3a41ea8b12d776 179 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 47.891 T 06-07-2017 IPR024900 O-acetyl-ADP-ribose deacetylase LFZ55_RS14540 85c46a2c7a591ece9c3a41ea8b12d776 179 Pfam PF01661 Macro domain 21 137 1.6E-45 T 06-07-2017 IPR002589 Macro domain LFZ55_RS14540 85c46a2c7a591ece9c3a41ea8b12d776 179 SUPERFAMILY SSF52949 4 172 3.03E-68 T 06-07-2017 LFZ55_RS19050 1646539eac240efcfa12f9daae7d604b 255 Gene3D G3DSA:3.60.110.10 4 253 6.9E-62 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS19050 1646539eac240efcfa12f9daae7d604b 255 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 06-07-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site LFZ55_RS19050 1646539eac240efcfa12f9daae7d604b 255 SUPERFAMILY SSF56317 4 249 2.62E-61 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS19050 1646539eac240efcfa12f9daae7d604b 255 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 1.5E-31 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.4E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Gene3D G3DSA:3.40.30.10 105 196 9.7E-36 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Gene3D G3DSA:3.50.50.60 211 333 3.2E-22 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Gene3D G3DSA:3.40.30.10 1 94 2.0E-33 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 SUPERFAMILY SSF51905 206 514 9.88E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Pfam PF13192 Thioredoxin domain 126 194 3.2E-9 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 06-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 SUPERFAMILY SSF52833 106 197 1.09E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 3.4E-38 T 06-07-2017 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 3.4E-38 T 06-07-2017 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 3.4E-38 T 06-07-2017 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 3.4E-38 T 06-07-2017 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 3.4E-38 T 06-07-2017 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Gene3D G3DSA:3.50.50.60 443 517 3.1E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Gene3D G3DSA:3.50.50.60 334 442 1.4E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 PIRSF PIRSF000238 1 521 1.4E-262 T 06-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 1.9E-239 T 06-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 4.3E-43 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17515 755eeff3e6717c0dc46cced5df177b2c 521 SUPERFAMILY SSF52833 1 101 8.61E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 7.4E-238 T 06-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.6E-93 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 Pfam PF13481 AAA domain 88 225 1.1E-14 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.189 T 06-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 SMART SM00382 94 248 5.3E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 Gene3D G3DSA:3.40.50.300 62 280 1.4E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 Gene3D G3DSA:3.30.230.10 288 456 2.4E-38 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 SUPERFAMILY SSF54211 258 272 1.25E-41 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 SUPERFAMILY SSF54211 306 457 1.25E-41 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.3E-9 T 06-07-2017 LFZ55_RS20410 77825172837825ff0e03e595f846afb6 460 SUPERFAMILY SSF52540 72 291 2.95E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06950 8acfeb84272c8a6be14d290233442043 408 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 6.3E-141 T 06-07-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 LFZ55_RS06950 8acfeb84272c8a6be14d290233442043 408 PIRSF PIRSF019466 1 408 8.7E-129 T 06-07-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 Pfam PF00005 ABC transporter 17 165 4.7E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 SMART SM00382 26 213 1.0E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 SUPERFAMILY SSF52540 1 235 3.17E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 Gene3D G3DSA:3.40.50.300 1 236 6.2E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17305 78c5e981f9aedfa21d4871e260ed2524 241 PIRSF PIRSF039085 1 241 7.7E-106 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 Gene3D G3DSA:3.30.250.10 273 328 4.3E-28 T 06-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 4.8E-173 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 Gene3D G3DSA:3.40.50.300 28 269 1.7E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 Hamap MF_00268 Protein RecA [recA]. 7 331 51.013 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 129 158 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 95 124 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 167 196 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 212 240 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 299 316 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 PRINTS PR00142 RecA protein signature 245 274 1.1E-83 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 SMART SM00382 59 230 4.5E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 ProSitePatterns PS00321 recA signature. 215 223 - T 06-07-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 SUPERFAMILY SSF52540 6 269 4.58E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 SUPERFAMILY SSF54752 272 327 4.19E-21 T 06-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal LFZ55_RS05260 e601bdaa71c602db9d3e1cc5b0ef9e41 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 1.2E-142 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 SUPERFAMILY SSF46894 147 204 7.82E-15 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 SMART SM00421 149 206 4.7E-16 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 204 9.0E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20545 3496e4a4011dc6848c55f1972e0d812e 224 Gene3D G3DSA:1.10.10.10 152 206 2.8E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 SUPERFAMILY SSF58104 59 235 4.71E-34 T 06-07-2017 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 Pfam PF13682 Chemoreceptor zinc-binding domain 245 308 5.6E-15 T 06-07-2017 IPR025991 Chemoreceptor zinc-binding domain LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 SMART SM00283 46 266 0.0029 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 83 234 2.5E-25 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 126 153 1.5E-12 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 155 184 1.5E-12 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 203 232 1.5E-12 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03545 a7784916973ae76d3341dc4fa940a5e9 351 Gene3D G3DSA:1.10.287.950 55 234 3.1E-34 T 06-07-2017 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 1.8E-17 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 Gene3D G3DSA:1.10.260.40 7 59 1.7E-22 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 Gene3D G3DSA:3.40.50.2300 60 171 4.8E-20 T 06-07-2017 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 SMART SM00354 5 77 1.8E-25 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 Gene3D G3DSA:3.40.50.2300 172 329 2.6E-30 T 06-07-2017 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 SUPERFAMILY SSF47413 6 63 1.49E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.8E-24 T 06-07-2017 LFZ55_RS12290 806fb3f05c58e964c17576f0e1f755f4 330 SUPERFAMILY SSF53822 67 329 1.76E-41 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 06-07-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 06-07-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 Gene3D G3DSA:3.20.20.140 6 347 3.0E-130 T 06-07-2017 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 Pfam PF01979 Amidohydrolase family 15 309 1.1E-21 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 60.699 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 SUPERFAMILY SSF51556 8 347 5.51E-145 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 1.0E-159 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LFZ55_RS14455 61c8afbab90670fd6578805c3cd64f58 348 PIRSF PIRSF001237 4 348 1.5E-137 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 SUPERFAMILY SSF52733 5 343 1.22E-111 T 06-07-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 Gene3D G3DSA:1.10.1610.10 1 73 8.6E-31 T 06-07-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 Pfam PF02277 Phosphoribosyltransferase 11 344 7.2E-116 T 06-07-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 9.3E-115 T 06-07-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 Gene3D G3DSA:3.40.50.10210 74 329 2.0E-99 T 06-07-2017 LFZ55_RS09165 6a0bfcd936b976d439714532ac8d828c 356 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 348 32.717 T 06-07-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS12400 19c1c513551f54569f91b4e87589cb72 328 SUPERFAMILY SSF53098 21 302 1.67E-29 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS12400 19c1c513551f54569f91b4e87589cb72 328 Pfam PF01609 Transposase DDE domain 36 242 4.2E-18 T 06-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS05390 a66312c54cf0e60648de2fec008f2703 81 Pfam PF00462 Glutaredoxin 3 58 1.5E-12 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LFZ55_RS05390 a66312c54cf0e60648de2fec008f2703 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 4.5E-35 T 06-07-2017 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 LFZ55_RS05390 a66312c54cf0e60648de2fec008f2703 81 SUPERFAMILY SSF52833 1 72 2.77E-20 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS05390 a66312c54cf0e60648de2fec008f2703 81 Gene3D G3DSA:3.40.30.10 1 73 3.6E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 6.7E-139 T 06-07-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 5.8E-115 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 PIRSF PIRSF006621 1 321 2.3E-99 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 Gene3D G3DSA:1.10.1200.80 252 319 9.6E-18 T 06-07-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 Gene3D G3DSA:3.20.20.70 7 244 8.1E-80 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.394 T 06-07-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS02325 99a0dc249b6a3044c1ee38f98e8e388c 321 SUPERFAMILY SSF51395 10 319 4.39E-86 T 06-07-2017 LFZ55_RS06595 2355118ca90e0522d47f4d51e3b32c36 82 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 8 52 2.0E-11 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) LFZ55_RS06595 2355118ca90e0522d47f4d51e3b32c36 82 SUPERFAMILY SSF46955 5 59 1.63E-5 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS06350 2355118ca90e0522d47f4d51e3b32c36 82 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 8 52 2.0E-11 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) LFZ55_RS06350 2355118ca90e0522d47f4d51e3b32c36 82 SUPERFAMILY SSF46955 5 59 1.63E-5 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 8.2E-164 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.31 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Pfam PF00202 Aminotransferase class-III 21 394 7.7E-125 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Hamap MF_01173 Succinylornithine transaminase [astC]. 1 406 73.761 T 06-07-2017 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Gene3D G3DSA:3.40.640.10 58 300 4.5E-94 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 SUPERFAMILY SSF53383 13 395 4.89E-128 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 3.8E-223 T 06-07-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Gene3D G3DSA:3.90.1150.10 304 398 4.8E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 Gene3D G3DSA:3.90.1150.10 8 57 4.8E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS13670 287262c69b28bab9b7f151ed4c0fa4bd 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Gene3D G3DSA:3.90.190.20 326 476 9.5E-54 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Gene3D G3DSA:3.40.1190.10 108 325 3.0E-85 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Gene3D G3DSA:3.40.50.720 20 107 4.4E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 2.0E-20 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 474 1.7E-182 T 06-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 SUPERFAMILY SSF53623 105 322 9.94E-74 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 SUPERFAMILY SSF53244 323 476 2.01E-44 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.181 T 06-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 SUPERFAMILY SSF51984 20 106 3.4E-29 T 06-07-2017 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Pfam PF08245 Mur ligase middle domain 124 304 6.2E-28 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS19730 3a68e019260fd891cb96c1377b927a00 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.5E-29 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Gene3D G3DSA:3.30.300.10 136 233 6.4E-44 T 06-07-2017 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Gene3D G3DSA:3.30.300.10 11 135 1.2E-50 T 06-07-2017 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 SUPERFAMILY SSF55973 233 382 1.37E-71 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.7E-43 T 06-07-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 PIRSF PIRSF000497 1 382 4.4E-176 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 SUPERFAMILY SSF55973 3 109 1.49E-47 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 SUPERFAMILY SSF55973 112 232 3.77E-52 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 7.5E-70 T 06-07-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 9.2E-46 T 06-07-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Gene3D G3DSA:3.30.300.10 244 381 7.5E-72 T 06-07-2017 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 06-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 06-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.161 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS03875 552d11b4fcfc93d13eabaf628d105ec2 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 4.0E-201 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 Pfam PF03466 LysR substrate binding domain 89 290 3.3E-25 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 Gene3D G3DSA:3.40.190.10 176 257 4.1E-8 T 06-07-2017 LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 SUPERFAMILY SSF53850 90 291 2.92E-27 T 06-07-2017 LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 Gene3D G3DSA:3.40.190.10 84 175 1.4E-10 T 06-07-2017 LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 SUPERFAMILY SSF46785 5 88 6.22E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 Gene3D G3DSA:1.10.10.10 6 83 8.7E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08905 7ed8dafe31d72f321d30fa57469632ac 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.4E-12 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 PRINTS PR00969 Pili chaperone signature 158 173 5.2E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 PRINTS PR00969 Pili chaperone signature 69 90 5.2E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 PRINTS PR00969 Pili chaperone signature 123 138 5.2E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 PRINTS PR00969 Pili chaperone signature 20 29 5.2E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 PRINTS PR00969 Pili chaperone signature 97 114 5.2E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 SUPERFAMILY SSF49354 14 141 6.28E-39 T 06-07-2017 IPR008962 PapD-like LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 141 1.6E-40 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 SUPERFAMILY SSF49584 136 220 4.32E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 Gene3D G3DSA:2.60.40.360 21 139 1.9E-41 T 06-07-2017 IPR008962 PapD-like LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 Gene3D G3DSA:2.60.40.1070 151 222 5.6E-8 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS08515 86161bd1f9a2446688dd2103ae2ae2b8 226 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PIRSF PIRSF001415 1 323 4.7E-148 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 06-07-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 SUPERFAMILY SSF51569 4 319 5.27E-129 T 06-07-2017 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 3.8E-135 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 SMART SM01004 3 321 8.1E-208 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 3.6E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 LFZ55_RS18575 7a78b00c27bec757751cdebfcf43eaf0 324 Gene3D G3DSA:3.20.20.70 2 319 9.9E-138 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS20455 d6712a1d423501df4edd5c6bac5f07cf 516 SUPERFAMILY SSF51998 24 470 2.01E-87 T 06-07-2017 LFZ55_RS20455 d6712a1d423501df4edd5c6bac5f07cf 516 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 3.4E-222 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted LFZ55_RS20455 d6712a1d423501df4edd5c6bac5f07cf 516 PIRSF PIRSF028991 6 516 1.1E-274 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted LFZ55_RS20455 d6712a1d423501df4edd5c6bac5f07cf 516 Gene3D G3DSA:3.20.70.20 84 475 9.9E-13 T 06-07-2017 LFZ55_RS20455 d6712a1d423501df4edd5c6bac5f07cf 516 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 504 1.3E-239 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 06-07-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 31.497 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 Gene3D G3DSA:3.30.70.890 169 298 1.6E-41 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 Gene3D G3DSA:3.30.230.10 1 164 7.2E-51 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 1.0E-13 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PIRSF PIRSF000676 1 309 2.2E-86 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 SUPERFAMILY SSF54211 1 160 1.06E-32 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PRINTS PR00958 Homoserine kinase signature 175 192 2.9E-34 T 06-07-2017 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PRINTS PR00958 Homoserine kinase signature 9 24 2.9E-34 T 06-07-2017 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PRINTS PR00958 Homoserine kinase signature 254 269 2.9E-34 T 06-07-2017 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PRINTS PR00958 Homoserine kinase signature 97 112 2.9E-34 T 06-07-2017 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 PRINTS PR00958 Homoserine kinase signature 137 150 2.9E-34 T 06-07-2017 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 SUPERFAMILY SSF55060 172 289 5.18E-34 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 6.9E-120 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LFZ55_RS20315 34ab8306478807b404cacf8058b63385 309 Pfam PF08544 GHMP kinases C terminal 213 287 1.0E-9 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 502 622 9.4E-48 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 501 625 9.4E-47 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 4.2E-211 T 06-07-2017 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 Pfam PF02378 Phosphotransferase system, EIIC 12 300 5.5E-75 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 3.9E-27 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 564 576 - T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 SUPERFAMILY SSF55604 392 465 1.31E-18 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 Gene3D G3DSA:3.30.1360.60 390 466 4.7E-26 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 Gene3D G3DSA:2.70.70.10 500 644 1.0E-55 T 06-07-2017 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 Pfam PF00367 phosphotransferase system, EIIB 396 427 3.6E-12 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS17180 40bb322f31bae86daff82d8a7159ae99 650 SUPERFAMILY SSF51261 499 646 4.36E-50 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 Pfam PF01316 Arginine repressor, DNA binding domain 12 77 1.1E-14 T 06-07-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 Pfam PF02863 Arginine repressor, C-terminal domain 88 153 1.2E-14 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 SUPERFAMILY SSF46785 8 78 6.42E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 Gene3D G3DSA:3.30.1360.40 83 155 1.3E-18 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 SUPERFAMILY SSF55252 87 155 1.44E-13 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 94 139 0.002 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 Gene3D G3DSA:1.10.10.10 7 79 8.4E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 Hamap MF_00173 Arginine repressor [argR]. 1 159 46.304 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 PRINTS PR01467 Bacterial arginine repressor signature 46 61 8.1E-14 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 PRINTS PR01467 Bacterial arginine repressor signature 95 108 8.1E-14 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 PRINTS PR01467 Bacterial arginine repressor signature 125 140 8.1E-14 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS21285 a242b361e274b7bdfa04abfb4a2f4ac9 162 PRINTS PR01467 Bacterial arginine repressor signature 29 42 8.1E-14 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LFZ55_RS21105 29bb0ae1d75c0516fc208bc9f4e15298 90 Gene3D G3DSA:1.10.260.40 3 71 2.7E-38 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21105 29bb0ae1d75c0516fc208bc9f4e15298 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 6 78 5.4E-37 T 06-07-2017 LFZ55_RS21105 29bb0ae1d75c0516fc208bc9f4e15298 90 SUPERFAMILY SSF47413 3 71 2.64E-29 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS13610 05382fdade9e2968c08c5a8cd8b8a34f 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 5.9E-172 T 06-07-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LFZ55_RS13610 05382fdade9e2968c08c5a8cd8b8a34f 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 5.9E-172 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS13610 05382fdade9e2968c08c5a8cd8b8a34f 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 3.6E-47 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS13610 05382fdade9e2968c08c5a8cd8b8a34f 452 PIRSF PIRSF006351 1 448 1.7E-134 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 5.6E-171 T 06-07-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 SUPERFAMILY SSF53383 24 393 2.95E-88 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 Gene3D G3DSA:3.40.640.10 6 258 3.7E-73 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 Gene3D G3DSA:3.90.1150.10 259 394 3.5E-38 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 PIRSF PIRSF001434 1 395 1.4E-115 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.5E-117 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS03425 fbd8f2f2f9ea41248dcea0714f8e9708 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS00575 57eb5285096b50ba893cd7b65330b81f 213 SUPERFAMILY SSF53271 3 207 5.24E-50 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS00575 57eb5285096b50ba893cd7b65330b81f 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.6E-71 T 06-07-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS00575 57eb5285096b50ba893cd7b65330b81f 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.372 T 06-07-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS00575 57eb5285096b50ba893cd7b65330b81f 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 5.0E-12 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS00575 57eb5285096b50ba893cd7b65330b81f 213 Gene3D G3DSA:3.40.50.2020 7 212 2.6E-83 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS09425 9585bb3e87e27de77ca34d55d1bc08f5 345 Pfam PF00589 Phage integrase family 149 307 3.5E-16 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS09425 9585bb3e87e27de77ca34d55d1bc08f5 345 Gene3D G3DSA:1.10.443.10 149 313 3.1E-18 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS09425 9585bb3e87e27de77ca34d55d1bc08f5 345 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 2.5E-16 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS09425 9585bb3e87e27de77ca34d55d1bc08f5 345 SUPERFAMILY SSF56349 131 316 3.53E-29 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 Pfam PF00005 ABC transporter 19 173 1.5E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 PIRSF PIRSF039085 1 249 6.1E-110 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 SMART SM00382 28 221 2.2E-20 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 SUPERFAMILY SSF52540 4 243 1.52E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09665 82a1085c95e907a05b335ad722646fbf 250 Gene3D G3DSA:3.40.50.300 3 245 1.0E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 Gene3D G3DSA:3.30.1330.30 1 76 1.1E-26 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 2.5E-92 T 06-07-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 SUPERFAMILY SSF55315 2 76 2.47E-20 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 3.9E-18 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.097 T 06-07-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 5.2E-41 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 SMART SM00967 4 80 8.8E-21 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 SUPERFAMILY SSF75217 69 242 3.73E-50 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS21680 846408ceae7ae43609dbbe3eb1b0478a 243 Gene3D G3DSA:3.40.1280.10 92 242 1.5E-54 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS14170 dc1cdc049a52bbec3088ca47189d440d 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 7.2E-164 T 06-07-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LFZ55_RS14170 dc1cdc049a52bbec3088ca47189d440d 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 3.7E-229 T 06-07-2017 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 LFZ55_RS14170 dc1cdc049a52bbec3088ca47189d440d 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 3.5E-16 T 06-07-2017 IPR025857 MacB-like periplasmic core domain LFZ55_RS14170 dc1cdc049a52bbec3088ca47189d440d 414 Pfam PF02687 FtsX-like permease family 274 407 1.7E-19 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Gene3D G3DSA:2.30.42.10 407 472 4.1E-21 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SUPERFAMILY SSF50156 272 381 4.26E-22 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 392 464 1.2E-13 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 288 368 2.3E-15 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 146 166 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 125 137 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.3E-60 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Pfam PF13365 Trypsin-like peptidase domain 115 251 6.6E-33 T 06-07-2017 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Gene3D G3DSA:2.40.10.10 179 291 2.7E-44 T 06-07-2017 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SUPERFAMILY SSF50494 8 60 8.3E-65 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SUPERFAMILY SSF50494 112 299 8.3E-65 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Gene3D G3DSA:2.40.10.10 39 178 1.2E-36 T 06-07-2017 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 Gene3D G3DSA:2.30.42.10 292 388 8.0E-29 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SUPERFAMILY SSF50156 399 471 2.76E-17 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 473 1.5E-166 T 06-07-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SMART SM00228 397 467 8.5E-12 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19355 72099098c79f21af92768115f842a6db 475 SMART SM00228 290 372 2.2E-14 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-24 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 SUPERFAMILY SSF55666 153 237 3.01E-26 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.7E-12 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.5E-114 T 06-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.809 T 06-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 Gene3D G3DSA:3.30.230.70 9 237 6.3E-35 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 SUPERFAMILY SSF54211 1 181 7.59E-46 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS00570 9f2731dad137c876df344adea72f7e7f 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 06-07-2017 IPR018336 Ribonuclease PH, conserved site LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 Pfam PF03466 LysR substrate binding domain 86 288 3.7E-42 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 SUPERFAMILY SSF46785 2 109 1.2E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 Gene3D G3DSA:1.10.10.10 1 87 2.6E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 Gene3D G3DSA:3.40.190.10 88 178 3.0E-17 T 06-07-2017 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 Gene3D G3DSA:3.40.190.10 179 261 6.2E-17 T 06-07-2017 LFZ55_RS23620 3b5a735b9d00ac109a7d5a463fcb311f 317 SUPERFAMILY SSF53850 87 291 5.31E-40 T 06-07-2017 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 PRINTS PR00969 Pili chaperone signature 105 122 2.7E-33 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 PRINTS PR00969 Pili chaperone signature 166 181 2.7E-33 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 PRINTS PR00969 Pili chaperone signature 77 98 2.7E-33 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 PRINTS PR00969 Pili chaperone signature 28 37 2.7E-33 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 PRINTS PR00969 Pili chaperone signature 131 146 2.7E-33 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 SUPERFAMILY SSF49354 23 149 2.28E-43 T 06-07-2017 IPR008962 PapD-like LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 SUPERFAMILY SSF49584 151 227 4.84E-19 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 Gene3D G3DSA:2.60.40.360 29 150 3.6E-45 T 06-07-2017 IPR008962 PapD-like LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 Gene3D G3DSA:2.60.40.1070 152 227 2.1E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 149 4.9E-44 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS02970 8db5552cefba06f421cb8656c5f7ffba 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 172 225 1.0E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 Gene3D G3DSA:1.20.1050.10 88 203 8.1E-28 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 Gene3D G3DSA:3.40.30.10 1 81 9.7E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 191 1.0E-7 T 06-07-2017 LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 SUPERFAMILY SSF47616 74 202 1.81E-27 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 SUPERFAMILY SSF52833 1 85 9.16E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS16340 da0bd87636daadfb7ca48679870ff29b 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 82 1.2E-13 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS05835 f125b850bc725a2eb1eefd1cb1880ef8 112 Gene3D G3DSA:3.30.160.100 3 91 4.5E-33 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS05835 f125b850bc725a2eb1eefd1cb1880ef8 112 SUPERFAMILY SSF69754 3 108 2.75E-33 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS05835 f125b850bc725a2eb1eefd1cb1880ef8 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.4E-35 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS05835 f125b850bc725a2eb1eefd1cb1880ef8 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 3.6E-22 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 1.4E-52 T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 PIRSF PIRSF000216 1 166 9.3E-54 T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 Gene3D G3DSA:3.40.30.10 86 164 9.8E-11 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 SUPERFAMILY SSF52833 16 165 3.35E-50 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07645 5fd6b8a89ba46794bf1bef9269adae02 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 2.5E-50 T 06-07-2017 LFZ55_RS24485 a7bc30f39ace4a72f19a3b2f4e899020 361 TIGRFAM TIGR03187 DGQHR: DGQHR domain 14 287 8.6E-48 T 06-07-2017 IPR017601 DGQHR-containing domain LFZ55_RS24485 a7bc30f39ace4a72f19a3b2f4e899020 361 Pfam PF14072 DNA-sulfur modification-associated 12 351 4.7E-47 T 06-07-2017 IPR017642 DNA sulphur modification protein DndB LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 Pfam PF00472 RF-1 domain 216 321 4.3E-41 T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 SMART SM00937 63 178 4.5E-72 T 06-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 Pfam PF03462 PCRF domain 13 203 1.3E-76 T 06-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 SUPERFAMILY SSF75620 12 353 9.81E-137 T 06-07-2017 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 Gene3D G3DSA:3.30.160.20 215 288 1.8E-35 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 Gene3D G3DSA:1.20.58.410 6 93 5.0E-20 T 06-07-2017 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.1E-177 T 06-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.164 T 06-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LFZ55_RS10875 eff1ba229127c83367fddfbb55613648 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LFZ55_RS05495 e4a5dfc41910e3c92e000ad04f38d56e 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 111 312 6.5E-19 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 LFZ55_RS05495 e4a5dfc41910e3c92e000ad04f38d56e 325 PIRSF PIRSF017082 1 325 7.0E-78 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 LFZ55_RS05495 e4a5dfc41910e3c92e000ad04f38d56e 325 SUPERFAMILY SSF53850 100 276 1.88E-7 T 06-07-2017 LFZ55_RS21620 a2418fd15aae825d49cb23b08f54ce77 155 SUPERFAMILY SSF55804 6 149 1.09E-35 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS21620 a2418fd15aae825d49cb23b08f54ce77 155 Gene3D G3DSA:3.40.930.10 7 150 2.9E-51 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS21620 a2418fd15aae825d49cb23b08f54ce77 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS21620 a2418fd15aae825d49cb23b08f54ce77 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 1.7E-32 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-35 T 06-07-2017 LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 SUPERFAMILY SSF52172 1 173 7.54E-38 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 SMART SM00448 1 112 5.7E-39 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 Gene3D G3DSA:1.10.10.10 124 221 1.1E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.1E-20 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS14115 7d140984b6d84165701e731a462062ed 223 SMART SM00862 145 220 2.9E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 Pfam PF03471 Transporter associated domain 206 281 6.4E-23 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 Gene3D G3DSA:3.30.465.10 197 283 1.1E-30 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 SMART SM00116 78 127 4.2 T 06-07-2017 IPR000644 CBS domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 SMART SM00116 141 189 1.1 T 06-07-2017 IPR000644 CBS domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 Pfam PF00571 CBS domain 140 189 2.9E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 Pfam PF00571 CBS domain 69 124 6.1E-8 T 06-07-2017 IPR000644 CBS domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 Gene3D G3DSA:3.10.580.10 55 196 5.3E-23 T 06-07-2017 LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 SUPERFAMILY SSF56176 204 289 4.36E-24 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 SMART SM01091 205 283 2.5E-31 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS17275 3bce0d036f3021c72a87808f396afb80 292 SUPERFAMILY SSF54631 66 202 1.77E-32 T 06-07-2017 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 PIRSF PIRSF000379 12 764 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 Pfam PF01228 Glycine radical 634 745 1.6E-41 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 Gene3D G3DSA:3.20.70.20 9 763 0.0 T 06-07-2017 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 Pfam PF02901 Pyruvate formate lyase-like 26 618 6.7E-193 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 SUPERFAMILY SSF51998 8 763 3.66E-279 T 06-07-2017 LFZ55_RS03010 a397631d8f174f6c2afff8994bff9bd9 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 SMART SM00448 4 119 8.4E-22 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 SUPERFAMILY SSF52738 156 342 4.97E-76 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 Pfam PF00072 Response regulator receiver domain 6 109 8.8E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 SUPERFAMILY SSF52172 1 108 8.68E-28 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 Gene3D G3DSA:3.40.50.180 155 341 5.0E-86 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 Pfam PF01339 CheB methylesterase 159 336 1.2E-63 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 PIRSF PIRSF000876 1 346 4.2E-140 T 06-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.72 T 06-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LFZ55_RS09850 a32cd29ee79d1453c462856f1012f8b9 349 Gene3D G3DSA:3.40.50.2300 2 108 6.6E-28 T 06-07-2017 LFZ55_RS13630 a475ee4230d2d829901ea8f7ab3a958d 275 SUPERFAMILY SSF52402 3 273 6.65E-84 T 06-07-2017 LFZ55_RS13630 a475ee4230d2d829901ea8f7ab3a958d 275 Pfam PF02540 NAD synthase 23 265 1.2E-76 T 06-07-2017 IPR022310 NAD/GMP synthase LFZ55_RS13630 a475ee4230d2d829901ea8f7ab3a958d 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 275 4.6E-84 T 06-07-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 LFZ55_RS13630 a475ee4230d2d829901ea8f7ab3a958d 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.061 T 06-07-2017 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 LFZ55_RS13630 a475ee4230d2d829901ea8f7ab3a958d 275 Gene3D G3DSA:3.40.50.620 4 269 8.8E-65 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS00480 db6f875f820ff645a2d4872002437ebb 390 SUPERFAMILY SSF56349 99 379 4.41E-60 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS00480 db6f875f820ff645a2d4872002437ebb 390 Gene3D G3DSA:1.10.150.130 99 193 2.6E-15 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS00480 db6f875f820ff645a2d4872002437ebb 390 Gene3D G3DSA:1.10.443.10 206 372 9.5E-26 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS00480 db6f875f820ff645a2d4872002437ebb 390 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 7.4E-20 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS00480 db6f875f820ff645a2d4872002437ebb 390 Pfam PF00589 Phage integrase family 206 370 1.9E-25 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS24825 05d762403f792df0bfaf521bda890e7a 160 Pfam PF10624 Plasmid conjugative transfer entry exclusion protein TraS 1 153 3.8E-62 T 06-07-2017 IPR018898 Plasmid conjugative transfer entry exclusion protein TraS LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 Gene3D G3DSA:3.10.290.10 102 190 1.1E-32 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 06-07-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 Gene3D G3DSA:1.10.1050.10 1 101 2.9E-41 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 SMART SM00363 96 160 8.2E-21 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.7E-87 T 06-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 SMART SM01390 3 95 1.3E-49 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.37 T 06-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 Pfam PF01479 S4 domain 97 143 7.1E-19 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.0E-30 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LFZ55_RS02160 80651f80fa5f50ccf533ac137a42bee0 206 SUPERFAMILY SSF55174 3 206 2.09E-73 T 06-07-2017 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.8E-8 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 3.5E-36 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Gene3D G3DSA:3.30.310.50 466 545 9.9E-31 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Gene3D G3DSA:3.40.120.10 226 316 1.3E-45 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 SUPERFAMILY SSF53738 209 317 1.41E-8 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 SUPERFAMILY SSF53738 26 235 7.3E-50 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 9.5E-31 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 SUPERFAMILY SSF55957 433 544 8.2E-20 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 06-07-2017 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 SUPERFAMILY SSF53738 305 446 3.06E-32 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Gene3D G3DSA:3.40.120.10 30 225 2.4E-60 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Gene3D G3DSA:3.40.120.10 318 441 1.4E-35 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17110 eea8a20fbe8196c7f35b005738ee4cf8 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.5E-21 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Gene3D G3DSA:1.10.10.60 224 272 2.6E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 1.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 1.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Pfam PF12833 Helix-turn-helix domain 193 271 1.6E-26 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 56.192 T 06-07-2017 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 SUPERFAMILY SSF46689 170 221 2.42E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 SUPERFAMILY SSF46689 223 272 3.72E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Gene3D G3DSA:2.60.120.10 1 77 1.5E-9 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 SMART SM00342 187 270 4.4E-34 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Pfam PF02311 AraC-like ligand binding domain 18 140 7.7E-21 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 SUPERFAMILY SSF51215 16 157 1.83E-11 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS23190 49735a0142fba0e188e18913b7145637 278 Gene3D G3DSA:1.10.10.60 167 223 4.6E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 Gene3D G3DSA:1.20.1250.20 23 223 8.6E-13 T 06-07-2017 LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 21 424 6.6E-97 T 06-07-2017 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 Gene3D G3DSA:1.20.1250.20 257 423 7.0E-13 T 06-07-2017 LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 SUPERFAMILY SSF103473 205 424 3.4E-38 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 SUPERFAMILY SSF103473 12 175 3.4E-38 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00275 7d2ddabbe3f8c9084db6f708994e4301 438 Pfam PF07690 Major Facilitator Superfamily 45 376 2.8E-19 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS13635 f594f4459df045afcbf51160fdb48d9d 302 SUPERFAMILY SSF82771 44 120 1.7E-10 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS13635 f594f4459df045afcbf51160fdb48d9d 302 SMART SM00465 43 121 4.5E-15 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 PRINTS PR00969 Pili chaperone signature 47 68 4.7E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 PRINTS PR00969 Pili chaperone signature 75 92 4.7E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 PRINTS PR00969 Pili chaperone signature 146 161 4.7E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 PRINTS PR00969 Pili chaperone signature 107 122 4.7E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 2 125 9.2E-41 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 Gene3D G3DSA:2.60.40.1070 129 216 6.9E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 Gene3D G3DSA:2.60.40.360 2 125 1.3E-43 T 06-07-2017 IPR008962 PapD-like LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 SUPERFAMILY SSF49354 2 125 4.07E-40 T 06-07-2017 IPR008962 PapD-like LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 SUPERFAMILY SSF49584 128 214 7.98E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 74 91 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS15115 64057c74e373ae42a94f14b491919bd4 220 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 152 213 1.0E-14 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS13235 d66341524435738f2c1e4887b34177d8 196 SUPERFAMILY SSF116927 30 192 1.18E-53 T 06-07-2017 LFZ55_RS13235 d66341524435738f2c1e4887b34177d8 196 Pfam PF03433 EspA-like secreted protein 8 187 6.1E-64 T 06-07-2017 IPR005095 EspA-like secreted protein LFZ55_RS00830 b5918b1b47786dfb40338e5abadbc8ec 231 SUPERFAMILY SSF53639 1 223 2.16E-70 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS00830 b5918b1b47786dfb40338e5abadbc8ec 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.1E-132 T 06-07-2017 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 LFZ55_RS00830 b5918b1b47786dfb40338e5abadbc8ec 231 SMART SM01007 7 198 1.3E-70 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS00830 b5918b1b47786dfb40338e5abadbc8ec 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 8.7E-48 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS00830 b5918b1b47786dfb40338e5abadbc8ec 231 Gene3D G3DSA:3.40.225.10 2 231 7.9E-73 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS20910 df19f137063326f44702bebddaad29fc 371 Gene3D G3DSA:3.40.50.620 194 314 3.7E-13 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20910 df19f137063326f44702bebddaad29fc 371 Pfam PF02698 DUF218 domain 198 328 3.2E-19 T 06-07-2017 IPR003848 Domain of unknown function DUF218 LFZ55_RS02995 18ede93c42361910e41f4722aa5b493b 329 SUPERFAMILY SSF53686 11 320 3.8E-94 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS02995 18ede93c42361910e41f4722aa5b493b 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 1.2E-114 T 06-07-2017 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 LFZ55_RS02995 18ede93c42361910e41f4722aa5b493b 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LFZ55_RS02995 18ede93c42361910e41f4722aa5b493b 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 2.6E-77 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS02995 18ede93c42361910e41f4722aa5b493b 329 Gene3D G3DSA:3.40.50.1100 76 323 2.5E-76 T 06-07-2017 LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 7.9E-55 T 06-07-2017 IPR006839 Ribosome-associated, YjgA LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 Gene3D G3DSA:1.10.60.30 36 110 4.9E-30 T 06-07-2017 IPR023153 PSPTO4464-like domain LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 Gene3D G3DSA:1.10.60.30 112 182 4.5E-31 T 06-07-2017 IPR023153 PSPTO4464-like domain LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 SUPERFAMILY SSF158710 37 179 2.48E-50 T 06-07-2017 LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 PIRSF PIRSF016183 10 183 9.1E-71 T 06-07-2017 IPR006839 Ribosome-associated, YjgA LFZ55_RS21410 702b217a3ed02d5cc34385b6759f5303 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 23.822 T 06-07-2017 IPR006839 Ribosome-associated, YjgA LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Gene3D G3DSA:2.40.430.10 118 195 2.6E-36 T 06-07-2017 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Gene3D G3DSA:1.20.58.370 2 95 8.2E-39 T 06-07-2017 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 SUPERFAMILY SSF161098 262 503 2.88E-60 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Gene3D G3DSA:3.10.650.10 196 269 4.4E-37 T 06-07-2017 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 501 8.7E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 5.4E-59 T 06-07-2017 IPR029345 Maltose transport system permease protein MalF, P2 domain LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 Gene3D G3DSA:1.10.3720.10 275 510 1.8E-62 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22550 baee2fc26e59cc9212e06a4362ed7d8d 514 SUPERFAMILY SSF160964 15 260 7.59E-89 T 06-07-2017 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Gene3D G3DSA:1.10.286.20 183 226 2.9E-20 T 06-07-2017 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Gene3D G3DSA:1.10.8.10 2 55 7.0E-28 T 06-07-2017 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Gene3D G3DSA:3.30.479.20 142 178 1.6E-30 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Gene3D G3DSA:3.30.479.20 227 262 1.6E-30 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Pfam PF00889 Elongation factor TS 71 263 5.7E-66 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 9.5E-121 T 06-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 06-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 06-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.604 T 06-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 SUPERFAMILY SSF54713 142 281 4.49E-53 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 06-07-2017 IPR009060 UBA-like GO:0005515 LFZ55_RS19310 682c9c8752445ef02215426a1d87ba15 283 SUPERFAMILY SSF54713 56 139 1.96E-20 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Gene3D G3DSA:3.10.25.10 204 305 8.2E-22 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Gene3D G3DSA:3.40.50.720 311 552 3.4E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 PIRSF PIRSF036506 1 660 0.0 T 06-07-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 3.9E-45 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Pfam PF00551 Formyl transferase 58 173 9.9E-23 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 SUPERFAMILY SSF53328 1 202 3.4E-53 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Gene3D G3DSA:3.90.25.10 570 641 5.1E-43 T 06-07-2017 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 SUPERFAMILY SSF50486 204 304 2.04E-23 T 06-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Gene3D G3DSA:3.40.50.170 1 199 2.3E-48 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 SUPERFAMILY SSF51735 317 651 5.98E-72 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Pfam PF02911 Formyl transferase, C-terminal domain 203 294 1.0E-17 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS07770 d2f0cc72996747c1303046f80b8cea36 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.605 T 06-07-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 LFZ55_RS21310 97b9d18a6337d81ed22a172e2dc2a537 128 SUPERFAMILY SSF55298 4 127 1.88E-43 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LFZ55_RS21310 97b9d18a6337d81ed22a172e2dc2a537 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 1.3E-44 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family LFZ55_RS21310 97b9d18a6337d81ed22a172e2dc2a537 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 2.8E-53 T 06-07-2017 IPR006056 RidA family LFZ55_RS21310 97b9d18a6337d81ed22a172e2dc2a537 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 06-07-2017 IPR019897 RidA, conserved site LFZ55_RS21310 97b9d18a6337d81ed22a172e2dc2a537 128 Gene3D G3DSA:3.30.1330.40 3 127 1.0E-46 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Pfam PF00809 Pterin binding enzyme 360 598 1.1E-61 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 PIRSF PIRSF000381 1 1195 0.0 T 06-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Gene3D G3DSA:3.40.50.280 744 895 3.0E-66 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 3.5E-92 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Gene3D G3DSA:3.20.20.330 3 363 1.1E-129 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Gene3D G3DSA:1.10.1240.10 650 737 3.1E-40 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SUPERFAMILY SSF47644 653 739 7.59E-29 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Gene3D G3DSA:3.20.20.20 364 636 6.4E-114 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Pfam PF02310 B12 binding domain 748 840 1.4E-18 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SUPERFAMILY SSF82282 7 399 4.97E-120 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 5.2E-127 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SUPERFAMILY SSF51717 356 630 6.93E-89 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SUPERFAMILY SSF56507 902 1226 3.79E-135 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SUPERFAMILY SSF52242 742 894 1.83E-48 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 SMART SM01018 657 740 8.7E-45 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Gene3D G3DSA:3.10.196.10 957 1226 8.7E-117 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 06-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS22635 8cea10b6a28ca68cb6bd7a24bb05d1a2 1227 Pfam PF02607 B12 binding domain 660 733 3.6E-25 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS23775 ec299a2ed939b99b53d79c7851fb4121 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 8.8E-76 T 06-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS23775 ec299a2ed939b99b53d79c7851fb4121 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 232 3.4E-52 T 06-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS23775 ec299a2ed939b99b53d79c7851fb4121 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.547 T 06-07-2017 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS17615 743f2cc7a92c1af19be558520eafb0b7 264 Pfam PF00005 ABC transporter 24 171 2.2E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS17615 743f2cc7a92c1af19be558520eafb0b7 264 SMART SM00382 32 238 3.5E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17615 743f2cc7a92c1af19be558520eafb0b7 264 SUPERFAMILY SSF52540 8 233 3.99E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17615 743f2cc7a92c1af19be558520eafb0b7 264 Gene3D G3DSA:3.40.50.300 8 236 7.2E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17615 743f2cc7a92c1af19be558520eafb0b7 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 Gene3D G3DSA:1.10.10.10 8 76 3.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 Pfam PF07840 FadR C-terminal domain 72 234 2.4E-72 T 06-07-2017 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 161.809 T 06-07-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 SUPERFAMILY SSF48008 79 230 2.49E-64 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 SMART SM00345 12 71 5.9E-23 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 SUPERFAMILY SSF46785 11 88 2.38E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.6E-20 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 9.2E-123 T 06-07-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 LFZ55_RS10515 28b60a6825f7a85a0900fcef395c3813 239 Gene3D G3DSA:1.20.120.530 80 236 2.8E-67 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS07385 b63390382fa286eecc369c212c36fd12 82 SUPERFAMILY SSF47413 1 71 3.87E-30 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS07385 b63390382fa286eecc369c212c36fd12 82 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 72 5.2E-32 T 06-07-2017 LFZ55_RS07385 b63390382fa286eecc369c212c36fd12 82 SMART SM00530 12 64 7.6E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS07385 b63390382fa286eecc369c212c36fd12 82 Gene3D G3DSA:1.10.260.40 3 71 2.2E-34 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:3.30.70.940 6 116 8.9E-43 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00738 6 115 8.6E-51 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 2.8E-71 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:2.30.30.30 120 181 1.7E-32 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00739 127 154 7.9E-7 T 06-07-2017 IPR005824 KOW LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 06-07-2017 IPR005824 KOW LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.8E-27 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.812 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS22825 728829054ec6249f1c5d4249b2b2eca4 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 06-07-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 ProSitePatterns PS00042 Crp-type HTH domain signature. 209 232 - T 06-07-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 SUPERFAMILY SSF51206 37 176 1.44E-31 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 Pfam PF13545 Crp-like helix-turn-helix domain 182 256 1.9E-16 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 Gene3D G3DSA:2.60.120.10 32 183 1.8E-40 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 SUPERFAMILY SSF46785 179 260 3.97E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 SMART SM00100 44 165 2.9E-22 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 Gene3D G3DSA:1.10.10.10 184 258 1.0E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 Pfam PF00027 Cyclic nucleotide-binding domain 65 146 1.1E-15 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 SMART SM00419 201 249 2.8E-13 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 223 2.4E-12 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11580 6d500bda4edd0790cda1e771d4e402ea 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 223 238 2.4E-12 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19835 af1a8636b60de51499a576925b20a550 201 SUPERFAMILY SSF52016 3 194 8.24E-60 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS19835 af1a8636b60de51499a576925b20a550 201 Gene3D G3DSA:3.20.19.10 5 196 5.3E-47 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS19835 af1a8636b60de51499a576925b20a550 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.691 T 06-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 LFZ55_RS19835 af1a8636b60de51499a576925b20a550 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 2.3E-101 T 06-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 LFZ55_RS19835 af1a8636b60de51499a576925b20a550 201 Pfam PF00694 Aconitase C-terminal domain 3 126 2.6E-39 T 06-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS17730 a383cc7d097b2ed907a2e0d69d7f2a5a 391 SUPERFAMILY SSF46565 249 289 2.49E-5 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS17730 a383cc7d097b2ed907a2e0d69d7f2a5a 391 Gene3D G3DSA:1.10.287.110 251 289 3.2E-4 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS18690 978c16899f56f38a08146e6853088d80 524 Gene3D G3DSA:3.20.20.450 256 502 2.6E-76 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18690 978c16899f56f38a08146e6853088d80 524 SUPERFAMILY SSF141868 259 503 1.09E-75 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18690 978c16899f56f38a08146e6853088d80 524 Pfam PF12792 CSS motif domain associated with EAL 32 228 5.5E-28 T 06-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LFZ55_RS18690 978c16899f56f38a08146e6853088d80 524 SMART SM00052 253 495 1.0E-86 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18690 978c16899f56f38a08146e6853088d80 524 Pfam PF00563 EAL domain 259 490 6.0E-61 T 06-07-2017 IPR001633 EAL domain LFZ55_RS14375 0df4e318c0eb705a289352305f5a557d 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 8.4E-31 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LFZ55_RS14375 0df4e318c0eb705a289352305f5a557d 251 SUPERFAMILY SSF117143 77 209 1.44E-16 T 06-07-2017 LFZ55_RS14375 0df4e318c0eb705a289352305f5a557d 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS14375 0df4e318c0eb705a289352305f5a557d 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-10 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14375 0df4e318c0eb705a289352305f5a557d 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 3.6E-22 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Pfam PF02839 Carbohydrate binding domain 657 704 2.1E-12 T 06-07-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Gene3D G3DSA:2.10.10.20 655 708 1.8E-8 T 06-07-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Gene3D G3DSA:3.10.50.10 361 444 6.9E-12 T 06-07-2017 IPR029070 Chitinase insertion domain LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SUPERFAMILY SSF54556 390 444 1.03E-10 T 06-07-2017 IPR029070 Chitinase insertion domain LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SMART SM00495 657 707 0.0089 T 06-07-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Gene3D G3DSA:3.20.20.80 451 501 3.1E-77 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Gene3D G3DSA:3.20.20.80 45 360 3.1E-77 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 Pfam PF00704 Glycosyl hydrolases family 18 54 474 1.1E-60 T 06-07-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SMART SM00636 53 474 1.4E-59 T 06-07-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SUPERFAMILY SSF51445 446 475 2.66E-62 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SUPERFAMILY SSF51445 49 358 2.66E-62 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS20230 31b723507cd1cf356feb1d96ddaff8a6 710 SUPERFAMILY SSF51055 654 708 5.69E-7 T 06-07-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 LFZ55_RS17720 8f3ed6d23e641db5ca73c76419e332cb 415 Pfam PF00924 Mechanosensitive ion channel 142 397 4.6E-68 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS17720 8f3ed6d23e641db5ca73c76419e332cb 415 SUPERFAMILY SSF82689 322 397 1.96E-5 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS17720 8f3ed6d23e641db5ca73c76419e332cb 415 Gene3D G3DSA:2.30.30.60 203 252 9.1E-9 T 06-07-2017 LFZ55_RS17720 8f3ed6d23e641db5ca73c76419e332cb 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 06-07-2017 IPR010920 LSM domain LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 Gene3D G3DSA:3.40.630.10 397 483 4.9E-110 T 06-07-2017 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 Gene3D G3DSA:3.40.630.10 3 181 4.9E-110 T 06-07-2017 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.1E-183 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 6.1E-103 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 PIRSF PIRSF016599 1 485 2.2E-212 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 SUPERFAMILY SSF53187 10 182 5.47E-65 T 06-07-2017 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 SUPERFAMILY SSF53187 397 481 5.47E-65 T 06-07-2017 LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 Pfam PF07687 Peptidase dimerisation domain 200 293 1.1E-8 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS19020 1bed06d8dedc9010af4d1037139b7210 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 2.5E-20 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LFZ55_RS09750 8873e16a5cf19ffab51eee8fc20076ca 165 SUPERFAMILY SSF47240 4 161 8.79E-56 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS09750 8873e16a5cf19ffab51eee8fc20076ca 165 Gene3D G3DSA:1.20.1260.10 1 160 4.2E-58 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS09750 8873e16a5cf19ffab51eee8fc20076ca 165 Pfam PF00210 Ferritin-like domain 7 143 3.4E-35 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 Pfam PF03466 LysR substrate binding domain 134 280 2.3E-10 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 Gene3D G3DSA:1.10.10.10 1 83 8.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 Gene3D G3DSA:3.40.190.10 183 263 1.1E-8 T 06-07-2017 LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 SUPERFAMILY SSF46785 2 81 4.08E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 SUPERFAMILY SSF53850 89 281 9.95E-17 T 06-07-2017 LFZ55_RS00555 5a3ae9b86598331e547617002509428a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.3E-12 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 SUPERFAMILY SSF47323 318 462 1.22E-43 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 SMART SM00840 343 404 7.9E-30 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 Gene3D G3DSA:3.40.50.620 20 307 3.2E-111 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 315 4.8E-143 T 06-07-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 3.0E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.0E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.0E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 3.0E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 Pfam PF09190 DALR domain 343 404 2.2E-25 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 Gene3D G3DSA:1.20.120.640 308 394 5.9E-29 T 06-07-2017 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 462 5.9E-197 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 463 39.277 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LFZ55_RS24360 64af1219dd23e593920154279d0b7481 463 SUPERFAMILY SSF52374 1 315 1.62E-101 T 06-07-2017 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Gene3D G3DSA:3.40.50.620 111 453 6.2E-118 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.132 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Gene3D G3DSA:1.10.730.10 454 577 9.2E-35 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 SUPERFAMILY SSF47323 454 577 2.42E-34 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 9.0E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 SMART SM01016 5 87 8.4E-29 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 SMART SM00836 460 577 3.4E-35 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 9.3E-22 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 SUPERFAMILY SSF52374 111 454 1.02E-96 T 06-07-2017 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Pfam PF05746 DALR anticodon binding domain 460 577 5.5E-34 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 1.1E-175 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 Gene3D G3DSA:3.30.1360.70 2 105 6.0E-35 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 9.8E-215 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09890 300ef83e2d129cd742769dbfff249e40 577 SUPERFAMILY SSF55190 2 100 3.66E-23 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 537 699 1.7E-11 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 Gene3D G3DSA:3.40.50.300 527 704 2.0E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 SUPERFAMILY SSF52540 526 706 3.76E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 507 710 6.6E-46 T 06-07-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 Pfam PF13807 G-rich domain on putative tyrosine kinase 366 446 6.1E-31 T 06-07-2017 IPR032807 Tyrosine kinase, G-rich domain LFZ55_RS08685 8729208caf28720b6e5dde554ee28770 719 Pfam PF02706 Chain length determinant protein 15 251 2.4E-46 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 Gene3D G3DSA:3.40.50.300 3 169 7.0E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 SUPERFAMILY SSF52540 4 170 2.79E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 4.9E-247 T 06-07-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 Pfam PF07670 Nucleoside recognition 512 689 8.1E-37 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 Pfam PF07670 Nucleoside recognition 353 443 6.1E-13 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 Pfam PF02421 Ferrous iron transport protein B 5 162 1.7E-64 T 06-07-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 157 1.1E-11 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS01650 0e6de0289e6f07face6108b164686f93 772 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 9.9E-22 T 06-07-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SMART SM00382 992 1180 1.6E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SMART SM00382 366 557 1.3E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SUPERFAMILY SSF52540 959 1202 2.46E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Pfam PF00005 ABC transporter 983 1132 1.0E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Pfam PF00005 ABC transporter 357 510 8.0E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SUPERFAMILY SSF90123 16 322 1.31E-52 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Pfam PF00664 ABC transporter transmembrane region 653 922 2.9E-43 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Pfam PF00664 ABC transporter transmembrane region 29 296 4.7E-31 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Gene3D G3DSA:3.40.50.300 965 1199 3.0E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Gene3D G3DSA:3.40.50.300 341 569 2.3E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SUPERFAMILY SSF52540 340 578 2.55E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Gene3D G3DSA:1.20.1560.10 641 950 1.6E-69 T 06-07-2017 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 Gene3D G3DSA:1.20.1560.10 16 323 3.7E-51 T 06-07-2017 LFZ55_RS05555 43f88851fe19125efd518597cad671e4 1221 SUPERFAMILY SSF90123 641 956 1.22E-67 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 1.3E-15 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 10 524 3.3E-255 T 06-07-2017 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 1.7E-85 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 1.4E-96 T 06-07-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 Gene3D G3DSA:3.30.1360.60 454 525 8.0E-27 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 SUPERFAMILY SSF55604 454 525 3.92E-21 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS12885 c88cfbcb6e6a7b80a7f5a02e3af6d13c 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 2.8E-26 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 SMART SM00829 12 329 0.005 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 SUPERFAMILY SSF50129 4 171 9.91E-49 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 Pfam PF00107 Zinc-binding dehydrogenase 174 299 1.5E-25 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 Gene3D G3DSA:3.90.180.10 1 166 8.5E-52 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 3.1E-30 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 Gene3D G3DSA:3.40.50.720 167 285 2.5E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12450 9c7ce25aed6e22187e4c402fc54cda05 341 SUPERFAMILY SSF51735 140 289 6.04E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.1E-23 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 SMART SM00862 145 216 1.6E-25 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 Gene3D G3DSA:1.10.10.10 123 216 9.5E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 SUPERFAMILY SSF52172 1 118 6.83E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 SUPERFAMILY SSF46894 119 216 1.22E-26 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-35 T 06-07-2017 LFZ55_RS03365 74491e9fbddf0cd97846c8a2e2bb751b 219 SMART SM00448 1 112 3.1E-37 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 SUPERFAMILY SSF52467 182 347 1.99E-43 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 8.2E-30 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 4.7E-39 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 5.4E-42 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 SUPERFAMILY SSF52518 2 177 2.01E-43 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Gene3D G3DSA:3.40.50.970 1 174 1.1E-51 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Gene3D G3DSA:3.40.50.1220 185 342 7.9E-44 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 Gene3D G3DSA:3.40.50.970 353 550 8.9E-60 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS15960 9512f58c677419769219d784dd0d40ad 572 SUPERFAMILY SSF52518 357 557 2.58E-59 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS03950 7df4ee63f438fed6d4bd9f3296c6b7ec 225 SUPERFAMILY SSF52540 22 221 1.53E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03950 7df4ee63f438fed6d4bd9f3296c6b7ec 225 SMART SM00382 27 219 7.3E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS03950 7df4ee63f438fed6d4bd9f3296c6b7ec 225 Pfam PF00005 ABC transporter 30 170 2.5E-19 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS03950 7df4ee63f438fed6d4bd9f3296c6b7ec 225 Gene3D G3DSA:3.40.50.300 23 221 7.0E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 SUPERFAMILY SSF56601 231 559 6.12E-87 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 Gene3D G3DSA:3.90.1310.10 138 237 4.5E-33 T 06-07-2017 LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 Gene3D G3DSA:3.40.710.10 238 556 1.3E-85 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 SUPERFAMILY SSF56519 59 229 2.75E-46 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 216 7.8E-21 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS19765 83fb5358f3a0376893fcd666bed36847 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 256 550 1.1E-82 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.3E-10 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.3E-10 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.3E-10 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 SUPERFAMILY SSF54909 62 151 9.52E-21 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 Gene3D G3DSA:3.30.70.920 55 139 1.1E-30 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 06-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 1.5E-21 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 Gene3D G3DSA:1.10.10.10 3 54 1.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 2.4E-16 T 06-07-2017 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 SMART SM00344 2 111 4.6E-39 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LFZ55_RS18165 7f4ef9d327fc7999d65bb0dae0b12792 152 SUPERFAMILY SSF46785 1 61 8.59E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 SUPERFAMILY SSF52540 2 185 5.33E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 Gene3D G3DSA:3.40.50.300 1 185 1.8E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 Pfam PF00005 ABC transporter 18 153 9.3E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 197 7.2E-80 T 06-07-2017 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 SMART SM00382 26 202 7.8E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS00120 e6d332e3a85646af9ebaf26ea1a59828 205 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 1.4E-121 T 06-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Gene3D G3DSA:3.30.43.10 3 68 7.5E-26 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 1.2E-34 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 SUPERFAMILY SSF56194 202 339 2.35E-52 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Gene3D G3DSA:3.30.465.10 72 228 1.4E-51 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 90.724 T 06-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Gene3D G3DSA:3.90.78.10 229 341 6.2E-47 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 Pfam PF01565 FAD binding domain 18 149 1.1E-24 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LFZ55_RS22880 17e036645d8f3796a57c1930315f7f40 342 SUPERFAMILY SSF56176 3 197 2.1E-48 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS17105 96765ca772877c67942dc6c5ea4600a4 161 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 154 5.1E-23 T 06-07-2017 IPR024747 Pyridoxamine 5'-phosphate oxidase-related LFZ55_RS17105 96765ca772877c67942dc6c5ea4600a4 161 SUPERFAMILY SSF50475 2 156 4.49E-44 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS17105 96765ca772877c67942dc6c5ea4600a4 161 Gene3D G3DSA:2.30.110.10 3 156 2.7E-47 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS22465 c3cf7a101071198dfac81bb733efae5d 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 2.4E-26 T 06-07-2017 IPR014318 Phage shock protein, PspG LFZ55_RS22465 c3cf7a101071198dfac81bb733efae5d 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 1.2E-27 T 06-07-2017 IPR014318 Phage shock protein, PspG LFZ55_RS12185 d9ac20a8794f7974387ea139dad6b4b0 47 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 44 6.0E-19 T 06-07-2017 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS12185 d9ac20a8794f7974387ea139dad6b4b0 47 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 1.7E-29 T 06-07-2017 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS05510 8abca2db8032e4ce0242e72c65fe5dfb 337 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 41 318 8.7E-132 T 06-07-2017 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 LFZ55_RS05510 8abca2db8032e4ce0242e72c65fe5dfb 337 Pfam PF03824 High-affinity nickel-transport protein 38 323 1.6E-94 T 06-07-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 5.0E-22 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 Gene3D G3DSA:3.40.710.10 28 283 1.2E-99 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 266 2.2E-100 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 Gene3D G3DSA:2.60.410.10 285 376 4.8E-29 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 SUPERFAMILY SSF69189 285 378 3.14E-24 T 06-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 SUPERFAMILY SSF56601 13 285 2.76E-83 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS16335 8b3e7936217a6ebb348b21b52e2627ec 400 SMART SM00936 285 376 1.7E-32 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS02105 4a3a5d27bc8e17ce4638d4aeec0903ff 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.076 T 06-07-2017 IPR023036 Ribosomal protein S14, bacterial/plastid LFZ55_RS02105 4a3a5d27bc8e17ce4638d4aeec0903ff 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.4E-26 T 06-07-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02105 4a3a5d27bc8e17ce4638d4aeec0903ff 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 06-07-2017 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02105 4a3a5d27bc8e17ce4638d4aeec0903ff 101 Gene3D G3DSA:4.10.830.10 41 101 5.9E-31 T 06-07-2017 LFZ55_RS02105 4a3a5d27bc8e17ce4638d4aeec0903ff 101 SUPERFAMILY SSF57716 2 101 3.42E-37 T 06-07-2017 LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 2.0E-17 T 06-07-2017 IPR012783 Zinc finger, C4 DksA/TraR-type LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 38 67 9.6E-15 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 SUPERFAMILY SSF57716 39 72 3.14E-8 T 06-07-2017 LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 06-07-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 5.7E-6 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS16500 35fa1282a2b75df419fb514d539112c2 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 5.7E-6 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 Gene3D G3DSA:3.20.20.150 1 277 1.4E-120 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 SUPERFAMILY SSF51658 1 277 1.57E-103 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 Pfam PF01261 Xylose isomerase-like TIM barrel 19 239 6.6E-41 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.829 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 8.2E-114 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LFZ55_RS08240 abe692e24c6cb2ecce5bd7ee416289aa 285 SMART SM00518 3 279 9.9E-139 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LFZ55_RS16575 14884bc3be7734c881ddb08868b51e87 150 Pfam PF02391 MoaE protein 11 121 1.2E-35 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16575 14884bc3be7734c881ddb08868b51e87 150 Gene3D G3DSA:3.90.1170.40 4 150 1.3E-55 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS16575 14884bc3be7734c881ddb08868b51e87 150 SUPERFAMILY SSF54690 6 150 2.09E-53 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 LFZ55_RS18760 0c65e89ea6ea6ec61887ea4a3f71a901 214 Pfam PF15977 Winged helix-turn-helix DNA binding 143 212 3.2E-17 T 06-07-2017 LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 Pfam PF00155 Aminotransferase class I and II 145 457 3.2E-34 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 SUPERFAMILY SSF53383 91 467 1.51E-91 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 SUPERFAMILY SSF46785 2 70 4.84E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 Gene3D G3DSA:3.40.640.10 144 356 4.4E-70 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.6E-14 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 SMART SM00345 7 66 6.4E-15 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12010 225e188286564ea05a919e2e745eeff4 469 Gene3D G3DSA:1.10.10.10 1 67 2.4E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 SUPERFAMILY SSF53850 90 296 4.89E-45 T 06-07-2017 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 Pfam PF03466 LysR substrate binding domain 89 293 1.4E-44 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 Gene3D G3DSA:1.10.10.10 6 84 5.7E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 8.9E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 Gene3D G3DSA:3.40.190.10 180 258 7.3E-19 T 06-07-2017 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.9E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.9E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.9E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 Gene3D G3DSA:3.40.190.10 93 179 1.9E-24 T 06-07-2017 LFZ55_RS19115 1e552e18573a7dd2ca4bacdacfe37f65 304 SUPERFAMILY SSF46785 7 113 3.54E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.686 T 06-07-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 SUPERFAMILY SSF82679 1 98 4.97E-28 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 1.5E-66 T 06-07-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 Gene3D G3DSA:3.30.70.940 2 96 2.0E-17 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 SMART SM00738 1 100 2.6E-34 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS23555 63d54ccb44ed6306732966623c8d13a7 162 Pfam PF02357 Transcription termination factor nusG 3 96 8.8E-20 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.247 T 06-07-2017 IPR006297 Elongation factor 4 GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.8E-12 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 1.8E-16 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.6E-49 T 06-07-2017 IPR013842 GTP-binding protein LepA, C-terminal LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.6E-52 T 06-07-2017 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 SUPERFAMILY SSF52540 2 235 1.74E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Gene3D G3DSA:3.40.50.300 2 192 2.8E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Gene3D G3DSA:2.40.30.10 193 289 1.2E-25 T 06-07-2017 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 7.5E-302 T 06-07-2017 IPR006297 Elongation factor 4 GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 SUPERFAMILY SSF54980 292 370 2.37E-18 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Gene3D G3DSA:3.30.70.870 291 369 9.0E-26 T 06-07-2017 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Pfam PF00679 Elongation factor G C-terminus 399 482 2.2E-19 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 Gene3D G3DSA:3.30.70.240 401 489 4.9E-20 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain LFZ55_RS05980 32e72f5598cfba7e303eb233601bd23e 599 SUPERFAMILY SSF54980 399 493 5.28E-24 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 Pfam PF00691 OmpA family 115 210 8.4E-23 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01021 OMPA domain signature 161 177 1.7E-13 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01021 OMPA domain signature 116 138 1.7E-13 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01021 OMPA domain signature 146 161 1.7E-13 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 SUPERFAMILY SSF103088 103 218 1.83E-38 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 06-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 Gene3D G3DSA:3.30.1330.60 103 216 2.7E-40 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 Pfam PF13488 Glycine zipper 37 85 1.7E-12 T 06-07-2017 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.7E-5 T 06-07-2017 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.7E-5 T 06-07-2017 LFZ55_RS00985 1220d19d75e8c29b45dd7bbd777054f9 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.7E-5 T 06-07-2017 LFZ55_RS05225 e6efcea0d14afdcdab6267d6a812d0a2 119 PIRSF PIRSF011474 1 119 4.7E-45 T 06-07-2017 IPR009693 Glucitol operon activator LFZ55_RS05225 e6efcea0d14afdcdab6267d6a812d0a2 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 7.9E-36 T 06-07-2017 IPR009693 Glucitol operon activator LFZ55_RS10935 c9dba58854a1a3597515282504dbd8ec 465 Gene3D G3DSA:1.20.1250.20 33 232 5.1E-13 T 06-07-2017 LFZ55_RS10935 c9dba58854a1a3597515282504dbd8ec 465 SUPERFAMILY SSF103473 20 460 7.32E-36 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS10935 c9dba58854a1a3597515282504dbd8ec 465 Pfam PF07690 Major Facilitator Superfamily 45 422 7.7E-15 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS10935 c9dba58854a1a3597515282504dbd8ec 465 Gene3D G3DSA:1.20.1250.20 252 457 3.4E-11 T 06-07-2017 LFZ55_RS10935 c9dba58854a1a3597515282504dbd8ec 465 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 9.1E-115 T 06-07-2017 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 LFZ55_RS00260 e6d952252441287e0cb433b39f7c033a 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 7.0E-15 T 06-07-2017 LFZ55_RS00260 e6d952252441287e0cb433b39f7c033a 96 Gene3D G3DSA:3.30.70.260 10 81 8.5E-21 T 06-07-2017 LFZ55_RS00260 e6d952252441287e0cb433b39f7c033a 96 SUPERFAMILY SSF55021 9 80 3.31E-16 T 06-07-2017 LFZ55_RS00260 e6d952252441287e0cb433b39f7c033a 96 Pfam PF13710 ACT domain 18 78 2.8E-9 T 06-07-2017 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 SMART SM00421 159 216 2.3E-21 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 SUPERFAMILY SSF46894 155 215 1.63E-18 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 4.8E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 4.8E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 4.8E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 214 2.0E-16 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS03640 8935f9bdee458c290472112e3c27fa59 227 Gene3D G3DSA:1.10.10.10 153 215 4.7E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19430 6645b55cdc615f3a12959a735c4c2a0b 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.1E-75 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein LFZ55_RS19430 6645b55cdc615f3a12959a735c4c2a0b 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 233 1.6E-95 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein LFZ55_RS19430 6645b55cdc615f3a12959a735c4c2a0b 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 57.426 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 Gene3D G3DSA:3.40.50.720 1 137 1.3E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 3.2E-53 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 Gene3D G3DSA:3.40.50.720 138 303 2.7E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 SUPERFAMILY SSF52283 2 135 4.35E-46 T 06-07-2017 LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 SUPERFAMILY SSF51735 102 298 6.55E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11675 a3b9fc2cce53dcf53f99fe4b76171e5c 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 2.8E-35 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SUPERFAMILY SSF55890 332 375 3.14E-8 T 06-07-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 374 2.3E-9 T 06-07-2017 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SMART SM00091 222 292 8.7E-8 T 06-07-2017 IPR000014 PAS domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SUPERFAMILY SSF55874 428 538 6.16E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Pfam PF13188 PAS domain 225 275 1.4E-4 T 06-07-2017 IPR000014 PAS domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Gene3D G3DSA:3.30.565.10 411 542 8.9E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 539 1.2E-14 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Gene3D G3DSA:3.30.450.20 223 289 5.8E-8 T 06-07-2017 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SMART SM00387 428 541 1.2E-21 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Gene3D G3DSA:3.30.450.20 43 179 2.4E-45 T 06-07-2017 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 3.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 3.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 3.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 3.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Gene3D G3DSA:1.10.287.130 318 386 7.8E-26 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SUPERFAMILY SSF55785 223 278 5.76E-8 T 06-07-2017 IPR000014 PAS domain LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 Pfam PF17203 Single cache domain 3 64 173 1.2E-19 T 06-07-2017 IPR033463 Single cache domain 3 LFZ55_RS17445 5cf30b42495188151fd8dc8c5f38d109 553 SUPERFAMILY SSF103190 48 179 2.17E-32 T 06-07-2017 IPR029151 Periplasmic sensor domain-like LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 SMART SM01134 77 238 1.0E-60 T 06-07-2017 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 2.6E-12 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 2.6E-12 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 Pfam PF00455 DeoR C terminal sensor domain 80 237 5.8E-48 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 SUPERFAMILY SSF100950 79 237 6.12E-26 T 06-07-2017 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 Gene3D G3DSA:3.30.750.70 87 155 4.5E-13 T 06-07-2017 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 8.0E-21 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 Gene3D G3DSA:1.10.10.10 3 86 1.7E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 SUPERFAMILY SSF46785 9 75 3.08E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS23345 16f4ef539dba6241a4ee8f20d22784ef 267 SMART SM00420 11 63 1.7E-20 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 231 3.2E-61 T 06-07-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 Gene3D G3DSA:3.40.50.1860 114 216 2.0E-34 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 06-07-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 Gene3D G3DSA:3.40.50.1860 2 113 2.3E-42 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 SUPERFAMILY SSF53681 118 229 1.46E-31 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 SUPERFAMILY SSF53681 2 116 1.53E-34 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS04345 d78b01478fbb8268f38ce27f4b30cc9c 235 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.5E-55 T 06-07-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 SUPERFAMILY SSF52540 494 571 2.05E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 SUPERFAMILY SSF52540 599 651 2.05E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 SUPERFAMILY SSF52540 719 901 2.05E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 Gene3D G3DSA:3.40.50.300 492 514 4.2E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 Gene3D G3DSA:3.40.50.300 557 575 4.2E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24375 24c94696fdfd9fea488dfb9841917081 1020 Gene3D G3DSA:3.40.50.300 776 877 4.2E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 Gene3D G3DSA:3.40.50.720 2 171 1.8E-23 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 4.9E-47 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 1.0E-137 T 06-07-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.438 T 06-07-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 SUPERFAMILY SSF51735 1 306 4.79E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00690 ccbf3223cb4d66b32511b19477584807 310 Gene3D G3DSA:3.90.25.10 172 291 6.8E-37 T 06-07-2017 LFZ55_RS05480 2e82c4b8bd24a6ea25cd9ee8fc7e63ad 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 19 314 7.0E-154 T 06-07-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 LFZ55_RS05480 2e82c4b8bd24a6ea25cd9ee8fc7e63ad 325 Gene3D G3DSA:3.60.130.10 16 325 1.7E-133 T 06-07-2017 LFZ55_RS05480 2e82c4b8bd24a6ea25cd9ee8fc7e63ad 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 73.469 T 06-07-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 LFZ55_RS05480 2e82c4b8bd24a6ea25cd9ee8fc7e63ad 325 SUPERFAMILY SSF51197 17 323 8.7E-94 T 06-07-2017 LFZ55_RS05480 2e82c4b8bd24a6ea25cd9ee8fc7e63ad 325 Pfam PF08943 CsiD 21 314 3.7E-146 T 06-07-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 LFZ55_RS07895 504a783abe744093b77043c1442c9fba 350 PIRSF PIRSF006268 1 347 5.2E-90 T 06-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 LFZ55_RS07895 504a783abe744093b77043c1442c9fba 350 SUPERFAMILY SSF143631 35 345 1.33E-93 T 06-07-2017 IPR003374 ApbE-like domain LFZ55_RS07895 504a783abe744093b77043c1442c9fba 350 Pfam PF02424 ApbE family 41 323 3.2E-79 T 06-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 LFZ55_RS17540 3e59cadd7bd20fed942f503debbb156e 411 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 5.6E-16 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 LFZ55_RS17540 3e59cadd7bd20fed942f503debbb156e 411 Gene3D G3DSA:3.40.50.620 13 235 2.5E-35 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17540 3e59cadd7bd20fed942f503debbb156e 411 Pfam PF11922 Domain of unknown function (DUF3440) 237 340 1.6E-24 T 06-07-2017 IPR021845 Protein of unknown function DUF3440 LFZ55_RS17540 3e59cadd7bd20fed942f503debbb156e 411 Pfam PF11922 Domain of unknown function (DUF3440) 353 383 2.9E-7 T 06-07-2017 IPR021845 Protein of unknown function DUF3440 LFZ55_RS17540 3e59cadd7bd20fed942f503debbb156e 411 SUPERFAMILY SSF52402 10 232 3.31E-42 T 06-07-2017 LFZ55_RS19720 b895b020232f67b280f217d6308e1a91 276 Pfam PF08478 POTRA domain, FtsQ-type 57 126 2.4E-20 T 06-07-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type LFZ55_RS19720 b895b020232f67b280f217d6308e1a91 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 255 26.012 T 06-07-2017 IPR026579 Cell division protein FtsQ GO:0090529 LFZ55_RS19720 b895b020232f67b280f217d6308e1a91 276 Pfam PF03799 Cell division protein FtsQ 130 247 1.3E-27 T 06-07-2017 IPR005548 Cell division protein FtsQ/DivIB LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 Gene3D G3DSA:3.40.50.1000 2 19 1.5E-32 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 Gene3D G3DSA:3.40.50.1000 88 212 1.5E-32 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 9.2E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 9.2E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 9.2E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 SUPERFAMILY SSF56784 4 211 1.02E-44 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.2E-20 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 183 7.5E-14 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS24135 0605da79390861d49c78d618c73393b6 221 Gene3D G3DSA:1.10.150.240 20 82 4.5E-5 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS10060 644a87a1d4caa4ec0074b17d328ef655 76 Gene3D G3DSA:1.10.1110.10 1 76 1.2E-42 T 06-07-2017 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS10060 644a87a1d4caa4ec0074b17d328ef655 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 3.2E-38 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LFZ55_RS10060 644a87a1d4caa4ec0074b17d328ef655 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 1.0E-37 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LFZ55_RS10060 644a87a1d4caa4ec0074b17d328ef655 76 SUPERFAMILY SSF46575 1 76 5.1E-34 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 Pfam PF00762 Ferrochelatase 5 316 1.2E-109 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 Gene3D G3DSA:3.40.50.1400 3 201 3.9E-68 T 06-07-2017 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 06-07-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 Gene3D G3DSA:3.40.50.1400 202 315 2.4E-30 T 06-07-2017 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.123 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 316 2.6E-125 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 LFZ55_RS18000 978fa08bb364a57558fc2b992c76035e 320 SUPERFAMILY SSF53800 4 317 2.49E-102 T 06-07-2017 LFZ55_RS00195 a62234f1ba6b0980cb9f97253fc99ce1 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 8 71 6.0E-22 T 06-07-2017 IPR020264 Uncharacterised protein family YidG LFZ55_RS00195 a62234f1ba6b0980cb9f97253fc99ce1 120 Pfam PF02656 Domain of unknown function (DUF202) 12 66 1.4E-7 T 06-07-2017 IPR003807 Domain of unknown function DUF202 LFZ55_RS24530 c3ad7694f36144e02e5824daabce6021 255 SUPERFAMILY SSF52540 9 166 2.79E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24530 c3ad7694f36144e02e5824daabce6021 255 Gene3D G3DSA:3.40.50.300 10 103 7.2E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24530 c3ad7694f36144e02e5824daabce6021 255 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 12 154 2.7E-7 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.987 T 06-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 3.0E-10 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 SUPERFAMILY SSF109635 9 109 3.01E-37 T 06-07-2017 LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 06-07-2017 LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 06-07-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LFZ55_RS19435 c6e2e7ea845c681a78816a934a3de084 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 2.6E-51 T 06-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 SUPERFAMILY SSF50249 1 105 1.75E-34 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 2.4E-278 T 06-07-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Gene3D G3DSA:2.40.50.140 1 106 9.7E-40 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 5.7E-107 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Gene3D G3DSA:3.30.930.10 415 585 2.4E-112 T 06-07-2017 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Gene3D G3DSA:3.30.930.10 131 275 2.4E-112 T 06-07-2017 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.3E-16 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Pfam PF02938 GAD domain 307 406 3.4E-32 T 06-07-2017 IPR029351 GAD domain Reactome: R-HSA-379726 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 SUPERFAMILY SSF55681 108 287 1.11E-106 T 06-07-2017 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 SUPERFAMILY SSF55681 420 584 1.11E-106 T 06-07-2017 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.081 T 06-07-2017 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 SUPERFAMILY SSF55261 288 419 1.8E-47 T 06-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 LFZ55_RS09930 a10d056072d0764615e547a9cef4a90a 590 Gene3D G3DSA:3.30.1360.30 276 414 6.0E-48 T 06-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 SUPERFAMILY SSF63380 94 201 9.35E-32 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 Gene3D G3DSA:2.40.30.20 106 199 4.9E-27 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 Gene3D G3DSA:2.40.30.20 5 105 1.1E-31 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 SUPERFAMILY SSF63380 1 93 6.46E-27 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 PIRSF PIRSF000498 1 212 9.3E-76 T 06-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 Pfam PF00677 Lumazine binding domain 100 185 1.3E-19 T 06-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 Pfam PF00677 Lumazine binding domain 3 87 2.1E-21 T 06-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS13095 1b4f1ed36728ace7172c5ce8c5e00a24 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.8E-88 T 06-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 SUPERFAMILY SSF47616 133 279 7.24E-32 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 Gene3D G3DSA:1.20.1050.10 131 254 3.1E-44 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 Gene3D G3DSA:3.40.30.10 33 130 1.0E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 SUPERFAMILY SSF52833 37 131 3.96E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 54 126 6.8E-7 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS03535 059a01c8d4caf241f59545bca1c7e300 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 244 2.2E-8 T 06-07-2017 LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 06-07-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 SUPERFAMILY SSF54211 5 115 4.3E-31 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 6.0E-46 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 2.2E-37 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.822 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 Gene3D G3DSA:3.30.230.10 5 116 5.8E-34 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS24185 5126393c1c1aca286be3d8d1fc14b6d1 119 Pfam PF00825 Ribonuclease P 6 111 1.4E-32 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 SUPERFAMILY SSF52317 289 542 5.0E-89 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 Gene3D G3DSA:3.40.50.300 1 280 4.2E-134 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.533 T 06-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.0E-266 T 06-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.2E-66 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 Gene3D G3DSA:3.40.50.880 288 541 2.1E-100 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 SUPERFAMILY SSF52540 3 269 3.54E-122 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04670 d33d5ee51493a3c7ce46dc0f59a8e377 545 Pfam PF06418 CTP synthase N-terminus 5 266 8.5E-126 T 06-07-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LFZ55_RS20165 b99eb6ba2aaeab46ba316c8779a08e98 332 Gene3D G3DSA:1.10.10.10 5 88 4.2E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20165 b99eb6ba2aaeab46ba316c8779a08e98 332 Gene3D G3DSA:3.40.190.10 174 277 7.5E-9 T 06-07-2017 LFZ55_RS20165 b99eb6ba2aaeab46ba316c8779a08e98 332 SUPERFAMILY SSF53850 141 283 1.76E-7 T 06-07-2017 LFZ55_RS20165 b99eb6ba2aaeab46ba316c8779a08e98 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.4E-13 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20165 b99eb6ba2aaeab46ba316c8779a08e98 332 SUPERFAMILY SSF46785 9 87 5.37E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24925 860ace2bb2153c62631921f9354660ce 81 Pfam PF10894 Protein of unknown function (DUF2689) 1 57 2.3E-40 T 06-07-2017 IPR024396 Conjugal transfer protein TrbD, putative LFZ55_RS24925 860ace2bb2153c62631921f9354660ce 81 Gene3D G3DSA:3.40.50.300 45 76 8.7E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24925 860ace2bb2153c62631921f9354660ce 81 ProDom PD027414 PLASMID TRBD ORFJ 4 54 1.0E-5 T 06-07-2017 IPR024396 Conjugal transfer protein TrbD, putative LFZ55_RS24925 860ace2bb2153c62631921f9354660ce 81 SUPERFAMILY SSF52540 44 77 5.38E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 282 7.8E-118 T 06-07-2017 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 PIRSF PIRSF000371 1 287 5.2E-89 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 Pfam PF04055 Radical SAM superfamily 27 227 2.3E-22 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 Gene3D G3DSA:3.80.30.10 113 281 1.0E-42 T 06-07-2017 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 Gene3D G3DSA:3.30.70.20 45 97 8.5E-13 T 06-07-2017 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 Pfam PF13353 4Fe-4S single cluster domain 17 181 4.7E-10 T 06-07-2017 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 SUPERFAMILY SSF54862 43 130 2.3E-15 T 06-07-2017 LFZ55_RS20460 c71d2381fcda15dfd140b9225851e1d2 287 SUPERFAMILY SSF102114 85 269 1.53E-12 T 06-07-2017 LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 SUPERFAMILY SSF117143 73 365 6.15E-84 T 06-07-2017 LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 326 403 2.3E-20 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 Pfam PF07559 Flagellar basal body protein FlaE 171 285 5.2E-20 T 06-07-2017 IPR011491 Flagellar hook protein FlgE LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14380 d1791c0316f621821fb5fc74e226d10f 404 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 386 2.7E-95 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 26.879 T 06-07-2017 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 5.5E-18 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 5.5E-18 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 5.5E-18 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 5.5E-18 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Gene3D G3DSA:1.10.287.130 473 520 2.3E-17 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Gene3D G3DSA:3.40.50.2300 822 944 9.2E-40 T 06-07-2017 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 2.0E-33 T 06-07-2017 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SMART SM00388 469 534 1.7E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SUPERFAMILY SSF47384 453 535 2.16E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SUPERFAMILY SSF55874 523 692 2.62E-47 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SMART SM00387 581 692 5.1E-37 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 4.7E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SUPERFAMILY SSF52172 701 814 1.49E-39 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SUPERFAMILY SSF52172 824 945 3.56E-38 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Pfam PF00072 Response regulator receiver domain 827 936 4.2E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 SMART SM00448 825 936 1.4E-37 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.1E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Gene3D G3DSA:3.30.565.10 521 692 5.4E-47 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07870 40b3ff254640cfa7a04e1b345dea9f02 948 Gene3D G3DSA:3.30.450.20 417 472 2.8E-6 T 06-07-2017 LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 6.0E-99 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 Gene3D G3DSA:3.40.50.300 31 147 9.6E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 PIRSF PIRSF003093 1 169 1.7E-86 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 41.066 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 SUPERFAMILY SSF52540 31 147 1.43E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15545 1433049b29eec409053edc58d4498b4f 169 Pfam PF03846 Cell division inhibitor SulA 7 119 1.6E-53 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.7E-29 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.7E-29 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.7E-29 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.7E-29 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.7E-29 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.3E-99 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 38.534 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS07175 b2b800cc2b0e2a93a1c9fd95a130e9fc 413 Pfam PF01566 Natural resistance-associated macrophage protein 38 383 2.3E-127 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 Gene3D G3DSA:3.50.30.70 97 247 2.4E-73 T 06-07-2017 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 PIRSF PIRSF011502 1 608 0.0 T 06-07-2017 IPR009191 Diol dehydratase-reactivating factor alpha subunit LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 3.0E-289 T 06-07-2017 IPR009191 Diol dehydratase-reactivating factor alpha subunit LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 SUPERFAMILY SSF53067 255 403 1.53E-69 T 06-07-2017 LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 SUPERFAMILY SSF53067 3 93 1.53E-69 T 06-07-2017 LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 SUPERFAMILY SSF53067 407 600 4.27E-34 T 06-07-2017 LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 4.0E-164 T 06-07-2017 IPR030994 Diol dehydratase reactivase ATPase-like domain LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 SUPERFAMILY SSF82317 93 254 2.49E-68 T 06-07-2017 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 Gene3D G3DSA:3.30.420.40 298 444 2.4E-40 T 06-07-2017 LFZ55_RS09030 deccadc374a810e5c566f7963481757c 610 Gene3D G3DSA:3.30.420.40 471 605 1.1E-38 T 06-07-2017 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 SUPERFAMILY SSF53738 153 261 1.37E-28 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 1.7E-32 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.7E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.7E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 1.7E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.7E-31 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 SUPERFAMILY SSF53738 3 176 5.49E-39 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 SUPERFAMILY SSF55957 373 458 2.79E-18 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 450 4.3E-11 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Gene3D G3DSA:3.40.120.10 172 254 8.2E-29 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Gene3D G3DSA:3.40.120.10 6 149 2.9E-36 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Gene3D G3DSA:3.40.120.10 255 368 7.4E-41 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Gene3D G3DSA:3.30.310.50 376 456 2.3E-17 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 258 1.8E-22 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 373 6.5E-25 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS08795 759dfbd4095483866f3275271d04e3af 462 SUPERFAMILY SSF53738 263 368 8.24E-32 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LFZ55_RS17485 956315e00c941b4103a56b8438e825c9 268 Gene3D G3DSA:3.90.730.10 34 263 1.2E-29 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 LFZ55_RS17485 956315e00c941b4103a56b8438e825c9 268 Pfam PF00445 Ribonuclease T2 family 38 236 1.0E-11 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 LFZ55_RS17485 956315e00c941b4103a56b8438e825c9 268 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 75 82 - T 06-07-2017 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 LFZ55_RS17485 956315e00c941b4103a56b8438e825c9 268 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 06-07-2017 IPR033130 Ribonuclease T2, His active site 2 LFZ55_RS17485 956315e00c941b4103a56b8438e825c9 268 SUPERFAMILY SSF55895 33 262 6.02E-27 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 Gene3D G3DSA:3.90.190.20 288 414 5.5E-47 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 06-07-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 06-07-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 SUPERFAMILY SSF53623 13 284 2.14E-88 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 PIRSF PIRSF001563 6 418 7.5E-109 T 06-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 Pfam PF08245 Mur ligase middle domain 54 196 3.6E-10 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 1.0E-6 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 Gene3D G3DSA:3.40.1190.10 11 287 1.1E-90 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 9.7E-110 T 06-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 LFZ55_RS07430 2a6a3d229f178a9d85e8d0cee0cb0efc 422 SUPERFAMILY SSF53244 286 414 6.41E-35 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS08450 116f02812b6ad9ab0171db39e16c08e3 388 SUPERFAMILY SSF161098 176 374 1.83E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08450 116f02812b6ad9ab0171db39e16c08e3 388 Gene3D G3DSA:1.10.3720.10 12 49 1.0E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08450 116f02812b6ad9ab0171db39e16c08e3 388 Gene3D G3DSA:1.10.3720.10 156 370 1.0E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08450 116f02812b6ad9ab0171db39e16c08e3 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 198 376 5.7E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 Pfam PF00771 FHIPEP family 28 663 2.0E-206 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 4.0E-55 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 PIRSF PIRSF005419 1 676 2.6E-206 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 18 672 8.5E-248 T 06-07-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 LFZ55_RS18865 2307e72396e1251ae0f9db126271ef96 680 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 06-07-2017 IPR025505 FHIPEP conserved site LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Gene3D G3DSA:3.40.50.720 2 113 4.2E-24 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 281 7.3E-18 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 SUPERFAMILY SSF52283 4 109 6.8E-17 T 06-07-2017 LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 4.5E-28 T 06-07-2017 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 SUPERFAMILY SSF51735 91 246 5.56E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.186 T 06-07-2017 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Gene3D G3DSA:3.40.50.720 114 259 1.8E-34 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07405 96eabb8c9d0cf179ec21e4e05f66b4c5 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 245 1.8E-29 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 PIRSF PIRSF018296 1 309 5.6E-138 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 Gene3D G3DSA:3.90.1670.10 24 307 6.2E-112 T 06-07-2017 IPR024064 FdhE-like LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 8.3E-118 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 SUPERFAMILY SSF144020 24 306 5.36E-99 T 06-07-2017 IPR024064 FdhE-like LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.246 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LFZ55_RS23295 7ab9f69a36b34a08edbade3dd6509689 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 9.7E-153 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LFZ55_RS24070 9e884a5752a23636166a80196d027b9b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.086 T 06-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LFZ55_RS24070 9e884a5752a23636166a80196d027b9b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.9E-62 T 06-07-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 LFZ55_RS24070 9e884a5752a23636166a80196d027b9b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.4E-39 T 06-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LFZ55_RS24070 9e884a5752a23636166a80196d027b9b 156 SUPERFAMILY SSF81573 63 121 1.96E-15 T 06-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain LFZ55_RS24070 9e884a5752a23636166a80196d027b9b 156 Gene3D G3DSA:1.20.5.620 62 122 7.3E-26 T 06-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:1.20.1640.10 292 505 7.9E-56 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82693 138 182 4.36E-24 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82693 274 330 4.36E-24 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:3.30.2090.10 722 811 3.3E-29 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:3.30.2090.10 181 275 4.9E-26 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82693 566 672 3.19E-28 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.4E-108 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82866 296 497 8.76E-47 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:3.30.70.1430 568 672 1.5E-32 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82714 723 809 1.14E-23 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82714 182 272 6.41E-21 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82866 807 1030 1.7E-43 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:1.10.3850.10 815 1028 1.9E-55 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 SUPERFAMILY SSF82693 39 132 2.96E-26 T 06-07-2017 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 06-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LFZ55_RS06830 5d5a290c72e73a26387c8c38f7d28685 1037 Gene3D G3DSA:3.30.70.1430 39 139 1.3E-33 T 06-07-2017 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 204 5.5E-39 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Gene3D G3DSA:1.10.1040.10 498 593 2.4E-20 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 688 2.8E-5 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 6.9E-26 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Gene3D G3DSA:1.10.1040.10 632 710 5.8E-17 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 5.0E-59 T 06-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 SUPERFAMILY SSF48179 495 635 1.7E-28 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 SUPERFAMILY SSF52096 3 303 6.88E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 06-07-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 SUPERFAMILY SSF51735 314 495 7.79E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 06-07-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Gene3D G3DSA:3.90.226.10 14 201 3.4E-59 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Gene3D G3DSA:3.90.226.10 235 296 3.4E-59 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.231 T 06-07-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 Gene3D G3DSA:3.40.50.720 304 497 8.3E-61 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23535 de6949fa37108616dca853ed8d04beab 729 SUPERFAMILY SSF48179 622 714 2.55E-23 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS13985 6dca86dfdaa81978a8441087c32ac555 156 SUPERFAMILY SSF49764 17 145 2.09E-20 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS13985 6dca86dfdaa81978a8441087c32ac555 156 Pfam PF00011 Hsp20/alpha crystallin family 48 145 1.2E-15 T 06-07-2017 IPR002068 Alpha crystallin/Hsp20 domain LFZ55_RS13985 6dca86dfdaa81978a8441087c32ac555 156 Gene3D G3DSA:2.60.40.790 16 146 1.7E-21 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 Gene3D G3DSA:1.10.260.40 4 64 4.5E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 SUPERFAMILY SSF53822 63 326 1.96E-53 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 SUPERFAMILY SSF47413 3 59 1.07E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 Gene3D G3DSA:3.40.50.2300 65 177 1.9E-37 T 06-07-2017 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 Gene3D G3DSA:3.40.50.2300 178 310 7.0E-44 T 06-07-2017 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 06-07-2017 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 Pfam PF13377 Periplasmic binding protein-like domain 171 329 7.1E-31 T 06-07-2017 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 SMART SM00354 3 73 1.4E-29 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.3E-21 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 6.4E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19550 ce900c3986a683d320567c0a2c41399a 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 6.4E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01895 75ac4c327d561bc0b976f754d9eacde6 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 2.0E-37 T 06-07-2017 IPR009662 Malonate decarboxylase delta subunit LFZ55_RS01895 75ac4c327d561bc0b976f754d9eacde6 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 95 1.4E-21 T 06-07-2017 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein LFZ55_RS01895 75ac4c327d561bc0b976f754d9eacde6 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 41.246 T 06-07-2017 IPR009662 Malonate decarboxylase delta subunit LFZ55_RS01895 75ac4c327d561bc0b976f754d9eacde6 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 3 95 6.0E-29 T 06-07-2017 IPR009662 Malonate decarboxylase delta subunit LFZ55_RS21155 6bb7164611b10dae67402cd428159d58 308 Gene3D G3DSA:1.10.150.130 1 97 3.2E-6 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS21155 6bb7164611b10dae67402cd428159d58 308 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 10 83 2.2E-7 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS21155 6bb7164611b10dae67402cd428159d58 308 Pfam PF00589 Phage integrase family 144 297 4.6E-20 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS21155 6bb7164611b10dae67402cd428159d58 308 Gene3D G3DSA:1.10.443.10 140 303 1.5E-25 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS21155 6bb7164611b10dae67402cd428159d58 308 SUPERFAMILY SSF56349 1 304 1.82E-40 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 Gene3D G3DSA:3.20.20.70 152 285 2.2E-59 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 Gene3D G3DSA:3.90.1170.20 20 151 2.5E-48 T 06-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 1.5E-24 T 06-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 PIRSF PIRSF006250 17 297 6.5E-109 T 06-07-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 SUPERFAMILY SSF54675 13 130 1.02E-32 T 06-07-2017 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 3.4E-102 T 06-07-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 1.6E-60 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LFZ55_RS19630 9468db567fcbbc7a2ca6b4c4de8d4619 297 SUPERFAMILY SSF51690 131 296 2.9E-59 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 1.3E-16 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.3E-16 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 1.3E-16 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 1.3E-16 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 1.3E-16 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 Pfam PF01514 Secretory protein of YscJ/FliF family 9 186 4.9E-16 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF LFZ55_RS05055 4f5a07ee4525e5f923da136fc6af79f9 252 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 3 194 1.1E-70 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 Pfam PF03734 L,D-transpeptidase catalytic domain 98 232 1.4E-20 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 SUPERFAMILY SSF141523 95 232 1.7E-29 T 06-07-2017 LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 Pfam PF01476 LysM domain 42 85 1.9E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 Gene3D G3DSA:3.10.350.10 40 86 1.6E-6 T 06-07-2017 IPR018392 LysM domain LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 SMART SM00257 41 85 4.6E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS13345 a77863354cec9bbbdef7bffccc54abbb 333 Gene3D G3DSA:2.40.440.10 90 234 1.1E-34 T 06-07-2017 LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 SUPERFAMILY SSF56281 1 250 1.7E-65 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 4.9E-21 T 06-07-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 PIRSF PIRSF005457 1 251 1.8E-88 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 Gene3D G3DSA:3.60.15.10 5 251 2.0E-83 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.415 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 4.1E-101 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 SMART SM00849 11 165 2.1E-35 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS19095 08e04caf65a7206cbd410b88bdb7268a 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 1.9E-17 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 3.7E-22 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 SUPERFAMILY SSF52343 100 231 6.81E-37 T 06-07-2017 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 67 9.4E-7 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 6.3E-14 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 6.3E-14 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 6.3E-14 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 6.3E-14 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.3E-14 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 Gene3D G3DSA:3.40.50.80 100 231 1.9E-39 T 06-07-2017 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 SUPERFAMILY SSF63380 3 97 6.99E-23 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS23545 58fcd7a563a8cb5897cbda2f6a0bb66d 233 Gene3D G3DSA:2.40.30.10 3 98 3.7E-30 T 06-07-2017 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 Pfam PF00551 Formyl transferase 86 262 1.4E-54 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 SUPERFAMILY SSF53328 86 279 8.9E-60 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.3E-132 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 Pfam PF01842 ACT domain 8 69 5.6E-8 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 Gene3D G3DSA:3.40.50.170 85 276 3.2E-57 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 6.0E-70 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 PIRSF PIRSF036480 4 280 7.2E-114 T 06-07-2017 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.266 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 SUPERFAMILY SSF55021 6 67 4.08E-9 T 06-07-2017 LFZ55_RS10985 3792f0c5956b4ab50bd5c2dc209db2f2 280 Gene3D G3DSA:3.30.70.260 6 71 4.0E-12 T 06-07-2017 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Gene3D G3DSA:3.40.50.10260 16 240 6.3E-67 T 06-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 22.907 T 06-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Gene3D G3DSA:3.40.1190.20 241 498 9.8E-92 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 06-07-2017 IPR017953 Carbohydrate kinase, predicted, conserved site LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 499 7.3E-92 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 SUPERFAMILY SSF53613 235 498 2.86E-75 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 499 23.585 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 SUPERFAMILY SSF64153 17 256 6.93E-62 T 06-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 PIRSF PIRSF017184 15 504 1.8E-162 T 06-07-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 219 5.3E-61 T 06-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.5E-43 T 06-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 Pfam PF01256 Carbohydrate kinase 258 495 6.8E-76 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LFZ55_RS21750 609fdb04b0e73d61e0cbcdd17890c579 515 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 323 333 - T 06-07-2017 IPR017953 Carbohydrate kinase, predicted, conserved site LFZ55_RS00920 1a4e50d8694a46fb382e26b5d82c3703 331 Pfam PF01757 Acyltransferase family 6 318 3.7E-35 T 06-07-2017 IPR002656 Acyltransferase 3 GO:0016747 LFZ55_RS00920 1a4e50d8694a46fb382e26b5d82c3703 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 37.986 T 06-07-2017 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SUPERFAMILY SSF50249 67 145 8.01E-17 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.053 T 06-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Gene3D G3DSA:2.40.50.140 644 734 3.9E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SUPERFAMILY SSF50249 138 235 8.19E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 6.9E-288 T 06-07-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SUPERFAMILY SSF50249 644 724 2.55E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 5.9E-288 T 06-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SMART SM00357 86 145 2.1E-16 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SMART SM00316 642 725 2.0E-16 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 6.4E-15 T 06-07-2017 IPR013668 Ribonuclease R winged-helix domain LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Pfam PF08206 Ribonuclease B OB domain 87 144 4.2E-22 T 06-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Pfam PF00773 RNB domain 260 587 8.6E-110 T 06-07-2017 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SUPERFAMILY SSF50249 222 641 1.14E-142 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 06-07-2017 IPR022966 Ribonuclease II/R, conserved site LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 Pfam PF00575 S1 RNA binding domain 641 724 6.0E-19 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS21685 c977c98bf7d95ddbfc681cbd50b833a1 814 SMART SM00955 260 588 2.7E-185 T 06-07-2017 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 Gene3D G3DSA:3.30.420.40 2 133 1.5E-32 T 06-07-2017 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 Pfam PF00480 ROK family 4 287 6.5E-82 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 SUPERFAMILY SSF53067 1 287 7.16E-53 T 06-07-2017 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 45.567 T 06-07-2017 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 LFZ55_RS02530 f54b564fbc40eef62a97200e7a782bf6 291 Gene3D G3DSA:3.30.420.40 134 260 2.1E-41 T 06-07-2017 LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 SUPERFAMILY SSF50685 25 353 8.37E-115 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 SMART SM00925 125 257 2.3E-70 T 06-07-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 Pfam PF03562 MltA specific insert domain 93 257 2.0E-40 T 06-07-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 Gene3D G3DSA:2.40.40.10 166 353 1.2E-46 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 Gene3D G3DSA:2.40.40.10 77 163 1.3E-13 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain LFZ55_RS04500 0ff4ce5ef310b63f98fee150e1e0a4f9 362 Pfam PF06725 3D domain 277 354 3.0E-24 T 06-07-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PIRSF PIRSF018539 1 268 2.8E-125 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 202 5.0E-8 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 186 201 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 61 81 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 138 157 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 20 41 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 95 113 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 PRINTS PR01388 Cytolethal distending toxin B signature 248 264 1.7E-55 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 Gene3D G3DSA:3.60.10.10 10 265 4.1E-105 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS11510 63e7924d8331fe0417446dd61376930d 275 SUPERFAMILY SSF56219 22 265 1.27E-27 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS12085 d717673ab00005ca84d4c149a89e5af7 73 SUPERFAMILY SSF50182 22 71 9.27E-18 T 06-07-2017 IPR010920 LSM domain LFZ55_RS12085 d717673ab00005ca84d4c149a89e5af7 73 Gene3D G3DSA:2.30.30.100 19 72 2.7E-26 T 06-07-2017 LFZ55_RS12085 d717673ab00005ca84d4c149a89e5af7 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 70 6.2E-23 T 06-07-2017 IPR010305 Protein of unknown function DUF903 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 4.2E-70 T 06-07-2017 IPR004494 MauM/NapG ferredoxin-type protein LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Gene3D G3DSA:3.30.70.20 70 105 6.5E-10 T 06-07-2017 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Gene3D G3DSA:1.10.1060.10 41 69 3.6E-10 T 06-07-2017 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Gene3D G3DSA:1.10.1060.10 155 196 3.6E-10 T 06-07-2017 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 SUPERFAMILY SSF54862 59 204 4.57E-26 T 06-07-2017 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Gene3D G3DSA:3.30.70.20 106 154 1.6E-7 T 06-07-2017 LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07935 90f90c593c098da12fad4650b2bb4b18 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.034 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Gene3D G3DSA:3.40.50.720 2 112 2.8E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Pfam PF13241 Putative NAD(P)-binding 6 115 5.9E-26 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Gene3D G3DSA:1.10.8.210 149 212 4.0E-23 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Gene3D G3DSA:3.30.160.110 113 148 1.4E-19 T 06-07-2017 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Gene3D G3DSA:3.40.1010.10 215 331 2.8E-45 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 9.5E-47 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 SUPERFAMILY SSF75615 114 209 5.89E-28 T 06-07-2017 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Gene3D G3DSA:3.30.950.10 332 456 1.1E-45 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 3.8E-70 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 PIRSF PIRSF036426 1 457 6.8E-203 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.895 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 2.5E-18 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 7.0E-9 T 06-07-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 SUPERFAMILY SSF51735 2 112 5.64E-28 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 SUPERFAMILY SSF53790 215 456 1.57E-76 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 5.2E-90 T 06-07-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS01800 7cc70f2409923a1a5fef0a9a8c406b9d 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 18 153 4.4E-45 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 SUPERFAMILY SSF48452 26 151 1.07E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 70 92 4.3E-6 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 46 65 4.3E-6 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 102 124 4.3E-6 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 Gene3D G3DSA:1.25.40.10 36 135 1.7E-9 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS13230 5059ce91fffe2ff682f13e098f86f1d1 157 PIRSF PIRSF003165 1 157 3.1E-50 T 06-07-2017 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 Gene3D G3DSA:2.60.300.12 18 111 1.4E-28 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 1.2E-17 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 2.9E-47 T 06-07-2017 IPR011298 FeS assembly scaffold SufA GO:0016226 LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 SUPERFAMILY SSF89360 18 111 4.32E-27 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 2.4E-32 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LFZ55_RS13375 5146bc14b682ae6103d964ceae05ad7f 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 Gene3D G3DSA:3.30.70.20 158 235 2.1E-27 T 06-07-2017 LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 Gene3D G3DSA:3.30.70.20 110 157 5.6E-25 T 06-07-2017 LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 Pfam PF13247 4Fe-4S dicluster domain 100 193 2.6E-30 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 Gene3D G3DSA:3.30.70.20 48 109 7.3E-15 T 06-07-2017 LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 SUPERFAMILY SSF54862 48 228 8.16E-66 T 06-07-2017 LFZ55_RS13300 c3caca99ac7470b4bf0fc177103f5696 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 138 149 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS13920 e088664cf523b0a7403cd6176e4437c5 216 Gene3D G3DSA:2.40.128.20 30 216 1.8E-84 T 06-07-2017 IPR012674 Calycin LFZ55_RS13920 e088664cf523b0a7403cd6176e4437c5 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 1.3E-81 T 06-07-2017 IPR015304 ZinT domain GO:0008270 LFZ55_RS13920 e088664cf523b0a7403cd6176e4437c5 216 SUPERFAMILY SSF50814 31 216 4.6E-77 T 06-07-2017 IPR011038 Calycin-like LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PIRSF PIRSF019574 1 348 1.1E-135 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.1E-96 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 Gene3D G3DSA:3.40.190.10 26 132 1.9E-64 T 06-07-2017 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 Gene3D G3DSA:3.40.190.10 270 313 1.9E-64 T 06-07-2017 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 SUPERFAMILY SSF53850 27 345 1.48E-97 T 06-07-2017 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 312 3.8E-40 T 06-07-2017 LFZ55_RS14155 f3da30a1629877e3b060c2d6672efd21 348 Gene3D G3DSA:3.40.190.10 134 269 1.5E-25 T 06-07-2017 LFZ55_RS18045 0e5a2cfcbe41e54d0062fcfa265e92fa 125 PIRSF PIRSF016789 2 123 1.1E-48 T 06-07-2017 IPR007401 Protein of unknown function DUF454 LFZ55_RS18045 0e5a2cfcbe41e54d0062fcfa265e92fa 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 1.5E-40 T 06-07-2017 IPR007401 Protein of unknown function DUF454 LFZ55_RS18045 0e5a2cfcbe41e54d0062fcfa265e92fa 125 Gene3D G3DSA:1.10.287.70 77 122 0.001 T 06-07-2017 LFZ55_RS23665 a87d5d88f0d39255b275ebc5026ff984 298 SUPERFAMILY SSF103481 190 285 4.84E-8 T 06-07-2017 LFZ55_RS23665 a87d5d88f0d39255b275ebc5026ff984 298 Pfam PF00892 EamA-like transporter family 9 142 6.6E-16 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS23665 a87d5d88f0d39255b275ebc5026ff984 298 SUPERFAMILY SSF103481 42 145 1.23E-14 T 06-07-2017 LFZ55_RS23665 a87d5d88f0d39255b275ebc5026ff984 298 TIGRFAM TIGR00688 rarD: protein RarD 8 261 3.9E-112 T 06-07-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 SMART SM00448 5 118 4.5E-23 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 SUPERFAMILY SSF52172 3 137 2.28E-30 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 Gene3D G3DSA:3.40.50.2300 2 130 1.2E-24 T 06-07-2017 LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 Pfam PF00072 Response regulator receiver domain 8 117 6.1E-20 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 PIRSF PIRSF006171 3 226 5.1E-73 T 06-07-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 LFZ55_RS17440 75859f7f0cb67ed2a21346c626f09268 226 Pfam PF12431 Transcriptional regulator 135 162 4.0E-10 T 06-07-2017 IPR028141 Transcriptional regulator LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 06-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 SUPERFAMILY SSF55594 1 82 1.96E-27 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 6.4E-31 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 Gene3D G3DSA:3.30.1340.10 1 83 4.5E-33 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-27 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.2E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.2E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07075 2cbed15e6dc4f688a3074f86589b5f38 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.2E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01460 b86ed7868712dbd7450dccb9dfb63b01 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 1.9E-43 T 06-07-2017 LFZ55_RS01460 b86ed7868712dbd7450dccb9dfb63b01 438 SUPERFAMILY SSF53850 25 425 4.92E-78 T 06-07-2017 LFZ55_RS01460 b86ed7868712dbd7450dccb9dfb63b01 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 06-07-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 LFZ55_RS01460 b86ed7868712dbd7450dccb9dfb63b01 438 Gene3D G3DSA:3.40.190.10 145 345 2.5E-42 T 06-07-2017 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 119.333 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 Gene3D G3DSA:3.40.1280.10 3 160 2.6E-66 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 234 9.3E-111 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 Gene3D G3DSA:1.10.1270.20 161 251 4.0E-38 T 06-07-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 PIRSF PIRSF000386 1 253 5.7E-103 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.5E-72 T 06-07-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LFZ55_RS05795 9c57aa2dcce977e88c2b776594cca4ef 255 SUPERFAMILY SSF75217 2 247 6.54E-102 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.242 T 06-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 PIRSF PIRSF006092 1 158 1.2E-56 T 06-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 SUPERFAMILY SSF54534 81 157 3.14E-25 T 06-07-2017 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.6E-30 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 SUPERFAMILY SSF46557 3 78 2.35E-29 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.9E-32 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 5.4E-61 T 06-07-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 Gene3D G3DSA:3.10.50.30 80 157 2.7E-33 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS02725 a4b6f2eef4d2e252585856f99ff9311f 158 Gene3D G3DSA:1.10.287.180 1 75 8.8E-36 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LFZ55_RS13360 ab3404436f2acef1e6a02e31d16ddbf9 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 135 409 1.3E-84 T 06-07-2017 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 LFZ55_RS13360 ab3404436f2acef1e6a02e31d16ddbf9 423 SUPERFAMILY SSF101960 11 420 1.31E-113 T 06-07-2017 LFZ55_RS13360 ab3404436f2acef1e6a02e31d16ddbf9 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 1.4E-69 T 06-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 SMART SM00895 119 247 1.3E-18 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 Pfam PF07729 FCD domain 119 246 3.3E-22 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 SMART SM00345 46 105 4.8E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 42 105 3.8E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 Gene3D G3DSA:1.10.10.10 38 109 2.0E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 Gene3D G3DSA:1.20.120.530 116 251 1.1E-23 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 SUPERFAMILY SSF46785 37 109 4.35E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 79 95 1.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 65 79 1.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12455 ee02c80085d7ae5209ae56801c90e137 254 SUPERFAMILY SSF48008 117 252 3.4E-26 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 361 48.382 T 06-07-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 SMART SM00450 1 131 4.9E-10 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 Gene3D G3DSA:3.40.250.10 10 128 4.1E-31 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 345 3.5E-101 T 06-07-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 SUPERFAMILY SSF52821 91 152 1.7E-20 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS17880 6be062444d990a4b2aac5de89eae7384 361 SUPERFAMILY SSF52821 6 63 1.7E-20 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 3.2E-103 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 SUPERFAMILY SSF54506 2 273 4.27E-55 T 06-07-2017 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.597 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 Gene3D G3DSA:3.10.310.10 1 120 8.6E-50 T 06-07-2017 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 Gene3D G3DSA:3.10.310.10 121 262 1.1E-51 T 06-07-2017 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 06-07-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 Pfam PF01678 Diaminopimelate epimerase 3 123 2.8E-34 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LFZ55_RS23705 dea6103df40a3e5eb376ed3bdbe23256 274 Pfam PF01678 Diaminopimelate epimerase 152 266 7.2E-33 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LFZ55_RS05615 bb2a978e96d3677a09ca259076c0a867 815 Pfam PF13953 PapC C-terminal domain 744 798 3.4E-7 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS05615 bb2a978e96d3677a09ca259076c0a867 815 SUPERFAMILY SSF141729 48 155 4.84E-25 T 06-07-2017 LFZ55_RS05615 bb2a978e96d3677a09ca259076c0a867 815 Pfam PF00577 Outer membrane usher protein 182 729 1.4E-164 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS05615 bb2a978e96d3677a09ca259076c0a867 815 Pfam PF13954 PapC N-terminal domain 24 162 1.5E-33 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 SUPERFAMILY SSF81296 12 158 6.72E-48 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 17 104 5.2E-19 T 06-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 Gene3D G3DSA:3.20.20.80 165 585 1.3E-116 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 689 0.0 T 06-07-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 Gene3D G3DSA:2.60.40.1180 592 690 7.8E-15 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 Gene3D G3DSA:2.60.40.10 12 164 3.5E-54 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 SMART SM00642 170 576 8.7E-7 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 SUPERFAMILY SSF51445 507 584 6.41E-126 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 SUPERFAMILY SSF51445 145 478 6.41E-126 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 SUPERFAMILY SSF51011 592 689 1.22E-10 T 06-07-2017 LFZ55_RS12235 f148e1070e50219164112b8f356030a3 691 Pfam PF00128 Alpha amylase, catalytic domain 193 298 3.1E-7 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 Gene3D G3DSA:4.10.480.10 224 299 5.6E-31 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 SUPERFAMILY SSF56770 45 302 3.03E-83 T 06-07-2017 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 3 365 4.5E-192 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 Gene3D G3DSA:3.40.50.700 47 222 1.9E-59 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PIRSF PIRSF000310 2 367 8.5E-135 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 7.9E-32 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 8.7E-69 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 302 7.0E-26 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal LFZ55_RS03485 c95ce50da33bd8c0a7a9625008781d7e 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 3.8E-6 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 SUPERFAMILY SSF55021 297 393 2.85E-17 T 06-07-2017 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 SUPERFAMILY SSF55021 372 448 2.75E-14 T 06-07-2017 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 Gene3D G3DSA:3.40.1160.10 3 53 9.8E-60 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 Gene3D G3DSA:3.40.1160.10 106 294 9.8E-60 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 3.7E-148 T 06-07-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 2.0E-138 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 Pfam PF00696 Amino acid kinase family 4 277 8.9E-48 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 PIRSF PIRSF000726 2 449 8.0E-162 T 06-07-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 Pfam PF01842 ACT domain 323 377 2.2E-6 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS22595 fd457b63a202995a832eddf2989aec31 449 SUPERFAMILY SSF53633 4 292 2.88E-75 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 6.6E-49 T 06-07-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 SUPERFAMILY SSF55620 186 268 2.89E-10 T 06-07-2017 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 2.5E-128 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 167.708 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 Gene3D G3DSA:3.30.1130.10 145 282 8.1E-55 T 06-07-2017 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 PIRSF PIRSF004750 6 282 2.0E-129 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 Gene3D G3DSA:3.30.1130.10 21 138 9.5E-45 T 06-07-2017 LFZ55_RS04600 14eeb5203bbeb74a888c718010965bb4 282 Pfam PF14489 QueF-like protein 196 270 5.1E-27 T 06-07-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 Gene3D G3DSA:3.40.50.1380 2 151 7.0E-66 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 SMART SM00851 25 118 9.7E-25 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 06-07-2017 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 40.723 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 Pfam PF02142 MGS-like domain 26 118 2.0E-18 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.8E-74 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 PIRSF PIRSF006614 8 151 3.4E-66 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LFZ55_RS15520 167b63348151aa9816e5a973a6ff959a 152 SUPERFAMILY SSF52335 2 147 1.26E-58 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 SUPERFAMILY SSF53067 259 492 1.61E-53 T 06-07-2017 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 Gene3D G3DSA:3.30.420.40 260 492 2.6E-45 T 06-07-2017 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 PIRSF PIRSF000538 5 498 1.8E-99 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 377 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 253 2.4E-83 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 443 8.9E-20 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 SUPERFAMILY SSF53067 7 255 3.59E-61 T 06-07-2017 LFZ55_RS00845 938c3b024a4bddad2c1f313580b54a8c 500 Gene3D G3DSA:3.30.420.40 4 250 1.1E-58 T 06-07-2017 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.0E-85 T 06-07-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 42.658 T 06-07-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 PIRSF PIRSF005784 3 191 4.6E-84 T 06-07-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 Gene3D G3DSA:3.30.70.20 122 178 5.3E-17 T 06-07-2017 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 Pfam PF04060 Putative Fe-S cluster 44 76 3.0E-12 T 06-07-2017 IPR007202 4Fe-4S domain GO:0051536 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 Gene3D G3DSA:3.30.70.20 88 121 4.1E-5 T 06-07-2017 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.9E-16 T 06-07-2017 LFZ55_RS12925 2889bb4aa6d469b45b5a3d5a2765e6e1 192 SUPERFAMILY SSF54862 38 175 1.91E-28 T 06-07-2017 LFZ55_RS19040 34fc46cec3c4819a29c4260353820bad 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.879 T 06-07-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 LFZ55_RS19040 34fc46cec3c4819a29c4260353820bad 192 SUPERFAMILY SSF53697 1 189 3.84E-52 T 06-07-2017 LFZ55_RS19040 34fc46cec3c4819a29c4260353820bad 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 6.7E-85 T 06-07-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 LFZ55_RS19040 34fc46cec3c4819a29c4260353820bad 192 Gene3D G3DSA:3.40.50.10490 1 190 9.1E-64 T 06-07-2017 LFZ55_RS19040 34fc46cec3c4819a29c4260353820bad 192 Pfam PF13580 SIS domain 12 146 6.7E-32 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SUPERFAMILY SSF52540 380 618 5.7E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SUPERFAMILY SSF46689 594 687 5.38E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SMART SM00382 401 545 4.0E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Gene3D G3DSA:3.30.450.40 16 167 2.2E-7 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Gene3D G3DSA:3.40.50.300 377 553 3.6E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Pfam PF02954 Bacterial regulatory protein, Fis family 645 684 1.9E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SUPERFAMILY SSF55781 26 168 1.11E-9 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Gene3D G3DSA:3.30.450.40 182 353 1.3E-24 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Gene3D G3DSA:1.10.8.60 554 606 1.9E-22 T 06-07-2017 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SMART SM00065 202 354 3.4E-24 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SMART SM00065 26 174 6.6E-7 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Gene3D G3DSA:1.10.10.60 607 687 2.3E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Pfam PF01590 GAF domain 202 344 1.6E-11 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 SUPERFAMILY SSF55781 184 360 2.84E-22 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05115 19195389b93242bfa6de411ef4ab16a1 692 Pfam PF00158 Sigma-54 interaction domain 381 548 4.2E-70 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 Pfam PF07057 DNA helicase TraI 1430 1548 3.1E-58 T 06-07-2017 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 SUPERFAMILY SSF55464 1 303 1.19E-104 T 06-07-2017 LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 SUPERFAMILY SSF52540 937 1110 4.28E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 SUPERFAMILY SSF52540 1328 1453 1.01E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 SUPERFAMILY SSF52540 1222 1254 1.01E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 SUPERFAMILY SSF52540 1088 1146 1.01E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 Pfam PF08751 TrwC relaxase 10 282 4.9E-76 T 06-07-2017 IPR014862 TrwC relaxase LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1458 0.0 T 06-07-2017 IPR014129 Conjugative transfer relaxase protein TraI LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 9.1E-112 T 06-07-2017 IPR014059 Conjugative relaxase, N-terminal LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 Pfam PF13604 AAA domain 967 1156 5.7E-34 T 06-07-2017 LFZ55_RS24800 022d6cb6262ebf4c5c90979808c1accf 1752 Gene3D G3DSA:3.40.50.300 936 1145 1.0E-25 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Gene3D G3DSA:3.40.50.980 185 216 6.8E-43 T 06-07-2017 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Gene3D G3DSA:3.40.50.980 23 152 6.8E-43 T 06-07-2017 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Gene3D G3DSA:3.40.50.980 217 379 5.5E-41 T 06-07-2017 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Pfam PF00501 AMP-binding enzyme 29 460 1.0E-114 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 8.9E-17 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Gene3D G3DSA:3.30.300.30 457 556 5.2E-29 T 06-07-2017 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 Gene3D G3DSA:2.30.38.10 380 451 9.2E-31 T 06-07-2017 LFZ55_RS10450 0d0f9380a1338574d326c68efc4f9c74 561 SUPERFAMILY SSF56801 15 555 3.79E-155 T 06-07-2017 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 Pfam PF00221 Aromatic amino acid lyase 11 471 3.4E-186 T 06-07-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 SUPERFAMILY SSF48557 3 504 2.12E-190 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 503 5.6E-221 T 06-07-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 Gene3D G3DSA:1.10.275.10 2 197 3.2E-75 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 Gene3D G3DSA:1.20.200.10 198 504 3.9E-125 T 06-07-2017 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.501 T 06-07-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16650 31dfa7b40c39c28d7f800a7d79a36eba 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 06-07-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 LFZ55_RS19610 65ad13aec2e27f4e2d4e2e11b91bd7e7 468 Pfam PF13347 MFS/sugar transport protein 13 432 1.2E-104 T 06-07-2017 LFZ55_RS19610 65ad13aec2e27f4e2d4e2e11b91bd7e7 468 Gene3D G3DSA:1.20.1250.20 19 210 8.5E-17 T 06-07-2017 LFZ55_RS19610 65ad13aec2e27f4e2d4e2e11b91bd7e7 468 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 446 3.4E-125 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS19610 65ad13aec2e27f4e2d4e2e11b91bd7e7 468 SUPERFAMILY SSF103473 12 427 1.7E-42 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS19610 65ad13aec2e27f4e2d4e2e11b91bd7e7 468 Gene3D G3DSA:1.20.1250.20 225 411 1.7E-9 T 06-07-2017 LFZ55_RS17330 11041b9a1d3cc885e7ff9ca8d5e00254 196 Pfam PF04390 Lipopolysaccharide-assembly 11 159 1.1E-22 T 06-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LFZ55_RS17330 11041b9a1d3cc885e7ff9ca8d5e00254 196 Gene3D G3DSA:3.30.160.150 19 171 1.0E-60 T 06-07-2017 LFZ55_RS17330 11041b9a1d3cc885e7ff9ca8d5e00254 196 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 25.989 T 06-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 1.4E-150 T 06-07-2017 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 Gene3D G3DSA:1.20.1250.20 252 437 1.3E-34 T 06-07-2017 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 06-07-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 Gene3D G3DSA:1.20.1250.20 25 221 4.5E-43 T 06-07-2017 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 Pfam PF07690 Major Facilitator Superfamily 34 402 5.9E-48 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 PIRSF PIRSF002808 6 453 8.4E-107 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS07260 91623ba4f7444bd19469a2d559e192d7 463 SUPERFAMILY SSF103473 9 438 2.49E-76 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 3.5E-22 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 SMART SM00478 39 190 8.4E-54 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Gene3D G3DSA:1.10.340.30 22 122 7.7E-46 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 SUPERFAMILY SSF48150 3 225 7.69E-79 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Gene3D G3DSA:1.10.1670.10 123 224 1.1E-40 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 6.4E-133 T 06-07-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.3E-9 T 06-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 06-07-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Gene3D G3DSA:3.90.79.10 229 345 1.9E-23 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 Pfam PF14815 NUDIX domain 234 343 3.8E-23 T 06-07-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 SMART SM00525 191 211 2.1E-4 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 06-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 LFZ55_RS03775 8a0375b3080c9ec8f4a3e979ccad14f5 350 SUPERFAMILY SSF55811 220 344 2.14E-25 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.8E-155 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 Pfam PF01235 Sodium:alanine symporter family 54 453 3.0E-142 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS20300 2944f9f4657b493bd1b7b6870ac413d0 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 4.0E-48 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Gene3D G3DSA:3.40.50.720 1 197 2.1E-66 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.2E-27 T 06-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 4.1E-7 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 2.4E-30 T 06-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 PIRSF PIRSF000124 1 388 9.7E-139 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Gene3D G3DSA:3.40.50.720 285 388 1.8E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 SUPERFAMILY SSF52413 283 387 6.93E-27 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 SMART SM00984 300 387 3.3E-12 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 SUPERFAMILY SSF48179 191 287 9.18E-31 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 Gene3D G3DSA:1.10.1040.10 198 284 5.3E-36 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.2E-100 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 SUPERFAMILY SSF51735 1 194 1.85E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08845 33961ab13bd6038fd93c7271c7395b1e 388 PIRSF PIRSF500134 1 344 1.2E-120 T 06-07-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 LFZ55_RS24810 69fd59799c71f1acad6375bd5f447ca1 132 SUPERFAMILY SSF88723 1 131 2.8E-36 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS24810 69fd59799c71f1acad6375bd5f447ca1 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 13.287 T 06-07-2017 IPR022907 VapC family GO:0004540 LFZ55_RS24810 69fd59799c71f1acad6375bd5f447ca1 132 Pfam PF01850 PIN domain 5 125 6.0E-17 T 06-07-2017 IPR002716 PIN domain LFZ55_RS24810 69fd59799c71f1acad6375bd5f447ca1 132 Gene3D G3DSA:3.40.50.1010 3 132 1.1E-32 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 Gene3D G3DSA:2.40.50.140 5 68 7.6E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 PIRSF PIRSF002599 1 70 1.4E-25 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 SMART SM00357 6 70 6.9E-31 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.2E-32 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS09445 2d06857d037d1bd435d694b858fb4559 70 SUPERFAMILY SSF50249 2 69 1.89E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 2.2E-219 T 06-07-2017 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 Gene3D G3DSA:3.40.640.10 1 248 2.7E-79 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 SUPERFAMILY SSF53383 2 375 2.29E-102 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 PIRSF PIRSF000390 1 376 2.6E-121 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.856 T 06-07-2017 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 Gene3D G3DSA:3.90.1150.10 251 375 9.0E-22 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS23795 303355ed33f0dded67318466b772cbb6 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 3.3E-88 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Gene3D G3DSA:1.10.287.80 19 60 7.9E-40 T 06-07-2017 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Gene3D G3DSA:1.10.287.80 202 235 7.9E-40 T 06-07-2017 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 SUPERFAMILY SSF52943 2 287 4.58E-97 T 06-07-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 06-07-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Gene3D G3DSA:3.40.1380.10 63 191 5.1E-44 T 06-07-2017 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.495 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Pfam PF00231 ATP synthase 5 286 1.1E-91 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 Gene3D G3DSA:1.10.287.80 236 282 4.6E-30 T 06-07-2017 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.9E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.9E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24085 9381e7326b46af4557bd7bd3af4c739c 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 9.7E-113 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS12245 55cc6b6fd517a31d087e76179ffb273d 483 Pfam PF03553 Na+/H+ antiporter family 163 464 1.5E-52 T 06-07-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 LFZ55_RS12245 55cc6b6fd517a31d087e76179ffb273d 483 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 13 469 6.1E-156 T 06-07-2017 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 SUPERFAMILY SSF55681 243 525 7.88E-97 T 06-07-2017 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 SMART SM00863 170 219 1.4E-19 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.2E-14 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 4.3E-51 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.10.20.30 1 64 6.7E-24 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Pfam PF03129 Anticodon binding domain 541 630 4.7E-23 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 SUPERFAMILY SSF52954 530 636 6.64E-34 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 SUPERFAMILY SSF55186 63 241 1.31E-64 T 06-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Pfam PF02824 TGS domain 4 61 2.3E-13 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.30.980.10 188 224 1.7E-41 T 06-07-2017 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.30.980.10 65 129 1.7E-41 T 06-07-2017 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 8.8E-248 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.174 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.40.50.800 532 640 5.7E-39 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 8.1E-55 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 8.1E-55 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 8.1E-55 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 8.1E-55 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 8.1E-55 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.30.54.20 130 187 8.7E-20 T 06-07-2017 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 SUPERFAMILY SSF81271 3 61 9.81E-17 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LFZ55_RS13520 a05401dcea914a6aac13606c9e6c7895 642 Gene3D G3DSA:3.30.930.10 242 529 1.2E-121 T 06-07-2017 LFZ55_RS05025 6739f4067503f73df8d2f3779af526fc 160 Pfam PF01464 Transglycosylase SLT domain 20 137 2.6E-33 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS05025 6739f4067503f73df8d2f3779af526fc 160 Gene3D G3DSA:1.10.530.10 23 145 2.8E-21 T 06-07-2017 LFZ55_RS05025 6739f4067503f73df8d2f3779af526fc 160 SUPERFAMILY SSF53955 14 145 7.78E-38 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06115 d15109b01f369962ee0f083e71471256 379 Pfam PF12832 MFS_1 like family 8 359 1.0E-46 T 06-07-2017 IPR024989 Major facilitator superfamily associated domain LFZ55_RS06115 d15109b01f369962ee0f083e71471256 379 PIRSF PIRSF004925 1 379 8.9E-118 T 06-07-2017 IPR026032 Probable 3-phenylpropionic acid transporter LFZ55_RS06115 d15109b01f369962ee0f083e71471256 379 SUPERFAMILY SSF103473 7 371 2.22E-37 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS06115 d15109b01f369962ee0f083e71471256 379 Gene3D G3DSA:1.20.1250.20 205 371 1.8E-20 T 06-07-2017 LFZ55_RS06115 d15109b01f369962ee0f083e71471256 379 Gene3D G3DSA:1.20.1250.20 8 189 2.4E-17 T 06-07-2017 LFZ55_RS18265 f5f33fdb477bd1d8466923103f89ca00 204 SUPERFAMILY SSF81452 10 202 7.06E-60 T 06-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18265 f5f33fdb477bd1d8466923103f89ca00 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 4.6E-89 T 06-07-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 LFZ55_RS18265 f5f33fdb477bd1d8466923103f89ca00 204 Gene3D G3DSA:1.20.120.80 23 202 1.5E-52 T 06-07-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18265 f5f33fdb477bd1d8466923103f89ca00 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.2E-15 T 06-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 SUPERFAMILY SSF47233 179 308 1.11E-43 T 06-07-2017 IPR014773 Virulence factor YopE uncharacterised domain LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Pfam PF09119 SicP binding 53 133 1.4E-39 T 06-07-2017 IPR015203 SicP binding GO:0005615 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 492 502 - T 06-07-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Gene3D G3DSA:3.90.190.10 443 553 9.5E-27 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Gene3D G3DSA:3.90.190.10 356 409 9.5E-27 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Pfam PF03545 Yersinia virulence determinant (YopE) 204 273 1.0E-30 T 06-07-2017 IPR014773 Virulence factor YopE uncharacterised domain LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Gene3D G3DSA:1.20.120.260 170 303 6.1E-49 T 06-07-2017 IPR014773 Virulence factor YopE uncharacterised domain LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 Pfam PF00102 Protein-tyrosine phosphatase 365 542 3.2E-13 T 06-07-2017 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 SMART SM00194 294 551 0.0011 T 06-07-2017 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 SUPERFAMILY SSF52799 319 549 1.84E-28 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 352 365 7.1E-27 T 06-07-2017 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 490 501 7.1E-27 T 06-07-2017 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 171 189 7.1E-27 T 06-07-2017 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 399 415 7.1E-27 T 06-07-2017 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 439 453 7.1E-27 T 06-07-2017 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 SUPERFAMILY SSF56568 49 148 3.53E-42 T 06-07-2017 IPR011070 Globular protein, non-globular alpha/beta subunit LFZ55_RS05020 0431e46cb7bfe01eda31a172afe86ab1 556 SMART SM00404 442 548 2.9E-13 T 06-07-2017 IPR003595 Protein-tyrosine phosphatase, catalytic LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 Gene3D G3DSA:2.60.40.360 22 143 3.8E-42 T 06-07-2017 IPR008962 PapD-like LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 SUPERFAMILY SSF49584 150 233 1.57E-18 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 SUPERFAMILY SSF49354 16 142 1.74E-37 T 06-07-2017 IPR008962 PapD-like LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 220 8.9E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 PRINTS PR00969 Pili chaperone signature 160 175 3.4E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 PRINTS PR00969 Pili chaperone signature 68 89 3.4E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 PRINTS PR00969 Pili chaperone signature 97 114 3.4E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 PRINTS PR00969 Pili chaperone signature 124 139 3.4E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 PRINTS PR00969 Pili chaperone signature 22 31 3.4E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 Gene3D G3DSA:2.60.40.1070 147 233 8.1E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS05620 bbe9f5a08505391063cbcfbd675ff8cd 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 142 4.9E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS03155 874bccaa8f32011591e720b7bf3442be 215 Gene3D G3DSA:1.10.10.10 59 159 3.6E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03155 874bccaa8f32011591e720b7bf3442be 215 Pfam PF03551 Transcriptional regulator PadR-like family 75 144 3.8E-15 T 06-07-2017 IPR005149 Transcription regulator PadR, N-terminal LFZ55_RS03155 874bccaa8f32011591e720b7bf3442be 215 SUPERFAMILY SSF46785 71 189 2.44E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20130 91f5ad9d74174d4b528cacd5dc776af1 388 Gene3D G3DSA:1.20.1530.10 2 385 5.9E-160 T 06-07-2017 IPR023171 Na/H antiporter domain LFZ55_RS20130 91f5ad9d74174d4b528cacd5dc776af1 388 Pfam PF06965 Na+/H+ antiporter 1 6 380 1.3E-151 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LFZ55_RS20130 91f5ad9d74174d4b528cacd5dc776af1 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 6.8E-197 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LFZ55_RS20130 91f5ad9d74174d4b528cacd5dc776af1 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 23.955 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 SUPERFAMILY SSF50475 21 218 4.12E-67 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 Gene3D G3DSA:2.30.110.10 22 218 1.0E-81 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 06-07-2017 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 PIRSF PIRSF000190 1 218 1.5E-84 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 122 1.1E-24 T 06-07-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 4.2E-100 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.406 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS12975 b64931bd4f5e65a87d890ae566a4f781 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 1.2E-18 T 06-07-2017 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS18480 f96154ef78c053afd263f1d8465cc424 94 SUPERFAMILY SSF51182 1 94 8.13E-34 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS18480 f96154ef78c053afd263f1d8465cc424 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.6E-34 T 06-07-2017 IPR009664 Protein of unknown function DUF1255 LFZ55_RS18480 f96154ef78c053afd263f1d8465cc424 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 26.35 T 06-07-2017 IPR009664 Protein of unknown function DUF1255 LFZ55_RS18480 f96154ef78c053afd263f1d8465cc424 94 Gene3D G3DSA:2.60.120.10 1 94 2.8E-38 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS10300 04d0ba9a8336568794f62cc71d54c3e2 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.24 T 06-07-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LFZ55_RS10300 04d0ba9a8336568794f62cc71d54c3e2 293 Gene3D G3DSA:3.30.2010.10 69 156 4.6E-32 T 06-07-2017 LFZ55_RS10300 04d0ba9a8336568794f62cc71d54c3e2 293 Pfam PF01435 Peptidase family M48 73 288 1.3E-39 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 2.0E-215 T 06-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 Gene3D G3DSA:1.20.1250.20 476 501 3.1E-22 T 06-07-2017 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 Gene3D G3DSA:1.20.1250.20 266 424 3.1E-22 T 06-07-2017 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 Gene3D G3DSA:1.20.1250.20 16 199 5.5E-31 T 06-07-2017 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 Pfam PF07690 Major Facilitator Superfamily 19 413 3.9E-54 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 SUPERFAMILY SSF103473 475 500 5.75E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 SUPERFAMILY SSF103473 9 196 5.75E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS05335 94686087b5d0919c0a204ecd95b5e4a6 512 SUPERFAMILY SSF103473 251 423 5.75E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.108 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 7.0E-66 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 SUPERFAMILY SSF89447 1 136 1.36E-45 T 06-07-2017 LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 9.0E-25 T 06-07-2017 IPR020603 MraZ domain LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 136 2.1E-20 T 06-07-2017 IPR020603 MraZ domain LFZ55_RS19785 0195383b95666cf993b40b8e6f0fdd82 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 7.0E-78 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LFZ55_RS23445 e2e3aa992fb5d9805d8869356c899237 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 3.9E-20 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS23445 e2e3aa992fb5d9805d8869356c899237 210 SUPERFAMILY SSF52540 17 199 5.95E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23445 e2e3aa992fb5d9805d8869356c899237 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.684 T 06-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 LFZ55_RS23445 e2e3aa992fb5d9805d8869356c899237 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 4.3E-76 T 06-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 LFZ55_RS23445 e2e3aa992fb5d9805d8869356c899237 210 Gene3D G3DSA:3.40.50.300 6 198 1.5E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 SUPERFAMILY SSF103473 1 430 1.7E-38 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 Pfam PF13347 MFS/sugar transport protein 12 431 5.0E-94 T 06-07-2017 LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 06-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 6.7E-147 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 Gene3D G3DSA:1.20.1250.20 9 205 1.9E-10 T 06-07-2017 LFZ55_RS03580 0ba2d8de0d1259a0cf0c29abcddac712 457 Gene3D G3DSA:1.20.1250.20 227 442 4.9E-17 T 06-07-2017 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 SMART SM00283 268 515 9.9E-95 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 514 1.8E-68 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 Gene3D G3DSA:1.10.287.950 283 487 7.4E-64 T 06-07-2017 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 Gene3D G3DSA:1.20.120.30 35 178 2.7E-37 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 SMART SM00319 43 181 3.3E-56 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 SUPERFAMILY SSF47170 38 179 4.19E-36 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 Pfam PF00672 HAMP domain 195 263 6.9E-15 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 SUPERFAMILY SSF58104 235 517 4.05E-76 T 06-07-2017 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 SMART SM00304 215 267 5.5E-14 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 Pfam PF02203 Tar ligand binding domain homologue 2 175 9.5E-41 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 59 74 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS01375 3c16c26600a57fe119ddbc9e94decf85 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 2.6E-86 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 06-07-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21575 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 SUPERFAMILY SSF50621 226 354 1.64E-43 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 Gene3D G3DSA:3.20.20.10 12 207 9.4E-67 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 TIGRFAM TIGR00492 alr: alanine racemase 4 354 2.1E-130 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 1.3E-65 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 SUPERFAMILY SSF51419 9 233 3.76E-64 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 Gene3D G3DSA:2.40.37.10 208 354 1.8E-53 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 06-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 SMART SM01005 232 356 1.7E-60 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 61 79 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 155 166 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 338 351 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 190 217 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 27 43 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 121 133 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 286 303 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 265 280 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 PRINTS PR00992 Alanine racemase signature 248 263 2.4E-75 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 353 8.4E-36 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10530 7f024cf3ca90c55d34a40f401f788a66 356 Hamap MF_01201 Alanine racemase. 2 356 33.061 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS10550 b3ee039a6aace20901e69cdde31d8842 244 Gene3D G3DSA:2.40.10.220 113 242 9.4E-38 T 06-07-2017 LFZ55_RS10550 b3ee039a6aace20901e69cdde31d8842 244 Pfam PF07238 PilZ domain 112 230 2.6E-10 T 06-07-2017 IPR009875 PilZ domain GO:0035438 LFZ55_RS10550 b3ee039a6aace20901e69cdde31d8842 244 Gene3D G3DSA:2.30.110.10 11 111 5.0E-10 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS10550 b3ee039a6aace20901e69cdde31d8842 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 29.608 T 06-07-2017 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 LFZ55_RS10550 b3ee039a6aace20901e69cdde31d8842 244 Pfam PF07317 Flagellar regulator YcgR 8 109 7.8E-30 T 06-07-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal LFZ55_RS14465 0eaed7e49e82f198345ebac873edc1d8 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 1.0E-44 T 06-07-2017 IPR025730 Biofilm regulator BssS LFZ55_RS14465 0eaed7e49e82f198345ebac873edc1d8 84 Pfam PF13991 BssS protein family 11 81 1.6E-33 T 06-07-2017 IPR025730 Biofilm regulator BssS LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 3.4E-49 T 06-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 3.8E-48 T 06-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 Gene3D G3DSA:3.40.50.720 184 358 2.9E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 SUPERFAMILY SSF51735 162 315 2.39E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 SUPERFAMILY SSF69742 1 158 6.67E-47 T 06-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 SUPERFAMILY SSF69075 317 417 1.44E-27 T 06-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.2E-24 T 06-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.827 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 2.9E-167 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 PIRSF PIRSF000445 1 418 1.2E-154 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10870 bf048632fe8823c47a04fee93ac4428e 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 06-07-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 LFZ55_RS10055 007653e29ce1983fd03c530f121864aa 218 Gene3D G3DSA:3.60.110.10 2 101 8.3E-12 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS10055 007653e29ce1983fd03c530f121864aa 218 Pfam PF00795 Carbon-nitrogen hydrolase 5 103 1.8E-15 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS10055 007653e29ce1983fd03c530f121864aa 218 SUPERFAMILY SSF56317 4 195 8.63E-17 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Pfam PF00684 DnaJ central domain 143 203 9.2E-16 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Gene3D G3DSA:2.10.230.10 137 206 1.7E-26 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 06-07-2017 IPR018253 DnaJ domain, conserved site LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SUPERFAMILY SSF46565 1 105 1.57E-36 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Gene3D G3DSA:2.60.260.20 102 136 4.2E-22 T 06-07-2017 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Gene3D G3DSA:2.60.260.20 207 250 4.2E-22 T 06-07-2017 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 42.922 T 06-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Gene3D G3DSA:2.60.260.20 252 329 2.1E-23 T 06-07-2017 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Gene3D G3DSA:1.10.287.110 1 101 5.4E-38 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SUPERFAMILY SSF49493 255 340 4.97E-21 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SUPERFAMILY SSF57938 130 207 6.02E-24 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SUPERFAMILY SSF49493 209 263 1.96E-22 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SUPERFAMILY SSF49493 110 165 1.96E-22 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 345 2.4E-143 T 06-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 SMART SM00271 4 62 1.6E-31 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Pfam PF01556 DnaJ C terminal domain 117 329 7.1E-46 T 06-07-2017 IPR002939 Chaperone DnaJ, C-terminal LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 Pfam PF00226 DnaJ domain 5 67 9.7E-29 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-33 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-33 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 PRINTS PR00625 DnaJ domain signature 62 81 1.1E-33 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS20255 42e3ee398c3b5fa519dc7ba2eb3746da 375 PRINTS PR00625 DnaJ domain signature 42 62 1.1E-33 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 3.4E-45 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 06-07-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 7.7E-59 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 30.735 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 SUPERFAMILY SSF81330 12 127 1.57E-35 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-14 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-14 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS02190 1be9b9f6e839ec10c7001a0303253dac 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-14 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.758 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Gene3D G3DSA:3.30.1270.10 211 246 4.2E-42 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Gene3D G3DSA:3.30.1270.10 82 134 4.2E-42 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Gene3D G3DSA:3.30.70.980 135 204 7.3E-31 T 06-07-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 SUPERFAMILY SSF75625 3 244 1.83E-97 T 06-07-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Pfam PF01709 Transcriptional regulator 5 235 7.1E-94 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 Gene3D G3DSA:1.10.10.200 1 79 1.1E-34 T 06-07-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like LFZ55_RS09940 dc6045f4889e274e270698854663e254 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 2.4E-107 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS01980 a8ca132a46eb32237b440255acd7fadd 95 Gene3D G3DSA:3.40.1260.10 1 94 3.4E-30 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS01980 a8ca132a46eb32237b440255acd7fadd 95 Pfam PF04077 DsrH like protein 13 91 3.4E-27 T 06-07-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LFZ55_RS01980 a8ca132a46eb32237b440255acd7fadd 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 28.958 T 06-07-2017 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 LFZ55_RS01980 a8ca132a46eb32237b440255acd7fadd 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 9.1E-31 T 06-07-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LFZ55_RS01980 a8ca132a46eb32237b440255acd7fadd 95 SUPERFAMILY SSF75169 1 95 2.65E-28 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS03380 7fd691f08c0e9d93fda670d5abdbbf72 245 Gene3D G3DSA:3.40.1130.10 64 229 6.6E-16 T 06-07-2017 LFZ55_RS03380 7fd691f08c0e9d93fda670d5abdbbf72 245 SMART SM00563 67 182 3.9E-39 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS03380 7fd691f08c0e9d93fda670d5abdbbf72 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.1E-50 T 06-07-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS03380 7fd691f08c0e9d93fda670d5abdbbf72 245 Pfam PF01553 Acyltransferase 54 180 1.2E-31 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS03380 7fd691f08c0e9d93fda670d5abdbbf72 245 SUPERFAMILY SSF69593 2 240 7.45E-61 T 06-07-2017 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 SUPERFAMILY SSF52343 100 265 2.88E-29 T 06-07-2017 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 Gene3D G3DSA:3.40.50.80 94 231 4.4E-27 T 06-07-2017 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 Pfam PF00175 Oxidoreductase NAD-binding domain 116 217 6.2E-20 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 235 264 5.6E-8 T 06-07-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 Gene3D G3DSA:2.10.240.10 235 264 2.7E-11 T 06-07-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 PIRSF PIRSF006816 13 272 2.2E-80 T 06-07-2017 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 Gene3D G3DSA:2.40.30.10 19 93 3.1E-10 T 06-07-2017 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 SUPERFAMILY SSF63380 16 103 1.1E-16 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS06140 7326f66f8f4d6d61aeabb35ec8da68ae 272 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 12 272 2.1E-140 T 06-07-2017 IPR014260 Sulphite reductase, subunit B LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Pfam PF00571 CBS domain 379 422 7.2E-6 T 06-07-2017 IPR000644 CBS domain LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Pfam PF00571 CBS domain 302 358 5.8E-4 T 06-07-2017 IPR000644 CBS domain LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Gene3D G3DSA:3.30.465.10 417 516 7.5E-26 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Pfam PF03741 Integral membrane protein TerC family 14 203 4.1E-49 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Gene3D G3DSA:3.10.580.10 288 416 2.7E-15 T 06-07-2017 LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 SUPERFAMILY SSF56176 437 523 5.73E-22 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 Pfam PF03471 Transporter associated domain 440 515 2.2E-19 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 SUPERFAMILY SSF54631 290 424 9.51E-26 T 06-07-2017 LFZ55_RS08665 abf595dfa686ed1e199174013565e75b 526 SMART SM01091 439 518 2.6E-25 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 SUPERFAMILY SSF103473 13 448 1.7E-79 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 PRINTS PR00171 Sugar transporter signature 109 128 1.4E-23 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 PRINTS PR00171 Sugar transporter signature 26 36 1.4E-23 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 PRINTS PR00171 Sugar transporter signature 262 272 1.4E-23 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 PRINTS PR00171 Sugar transporter signature 375 387 1.4E-23 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 PRINTS PR00171 Sugar transporter signature 352 373 1.4E-23 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 Pfam PF00083 Sugar (and other) transporter 18 450 8.6E-143 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 Gene3D G3DSA:1.20.1250.20 244 449 8.6E-27 T 06-07-2017 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 Gene3D G3DSA:1.20.1250.20 20 206 8.8E-30 T 06-07-2017 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 7.0E-154 T 06-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS03870 2cacdee9f96df48e0d28acac63e61726 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS20890 d7b49c08771a74feea7c62c3455035b5 232 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 9 219 2.1E-79 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 LFZ55_RS20890 d7b49c08771a74feea7c62c3455035b5 232 Pfam PF08900 Domain of unknown function (DUF1845) 7 219 1.4E-75 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 Gene3D G3DSA:3.40.250.10 117 242 2.3E-37 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 Pfam PF12368 Rhodanase C-terminal 246 307 1.0E-18 T 06-07-2017 IPR022111 Rhodanase, C-terminal LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 Pfam PF00581 Rhodanese-like domain 138 232 1.1E-12 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 SUPERFAMILY SSF52821 115 270 4.06E-31 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.167 T 06-07-2017 IPR020936 Uncharacterised protein family UPF0176 LFZ55_RS14490 6caa6fbcb95a8690fb36584140b51d50 350 SMART SM00450 136 237 3.6E-24 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS09625 98118cf08454405bd8a614dccae97eb4 468 Pfam PF07196 Flagellin hook IN motif 130 186 2.4E-10 T 06-07-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 LFZ55_RS09625 98118cf08454405bd8a614dccae97eb4 468 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 452 8.2E-62 T 06-07-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 LFZ55_RS09625 98118cf08454405bd8a614dccae97eb4 468 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 9.2E-19 T 06-07-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 LFZ55_RS17895 db1404b1e5828e6d31be3dc0f7238849 276 SUPERFAMILY SSF53850 31 260 4.15E-66 T 06-07-2017 LFZ55_RS17895 db1404b1e5828e6d31be3dc0f7238849 276 Gene3D G3DSA:3.40.190.10 29 160 1.0E-43 T 06-07-2017 LFZ55_RS17895 db1404b1e5828e6d31be3dc0f7238849 276 Pfam PF03180 NLPA lipoprotein 32 260 8.3E-78 T 06-07-2017 IPR004872 Lipoprotein NlpA family LFZ55_RS21345 52943fcbe58dc6042e23efe5acc9c846 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 2.1E-9 T 06-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LFZ55_RS21345 52943fcbe58dc6042e23efe5acc9c846 94 SUPERFAMILY SSF143011 1 82 1.57E-21 T 06-07-2017 LFZ55_RS21345 52943fcbe58dc6042e23efe5acc9c846 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.7E-13 T 06-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 SUPERFAMILY SSF51569 1 315 6.91E-114 T 06-07-2017 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 Hamap MF_00492 Transaldolase [tal]. 1 316 52.899 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 3.0E-161 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 Gene3D G3DSA:3.20.20.70 1 315 1.0E-132 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 Pfam PF00923 Transaldolase 13 310 2.2E-102 T 06-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS06875 a1d97ff3e077e55e183af50deb159dd8 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 220 1.9E-11 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 PRINTS PR00969 Pili chaperone signature 128 143 7.5E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 PRINTS PR00969 Pili chaperone signature 29 38 7.5E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 PRINTS PR00969 Pili chaperone signature 74 95 7.5E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 PRINTS PR00969 Pili chaperone signature 163 178 7.5E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 PRINTS PR00969 Pili chaperone signature 102 119 7.5E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 146 2.6E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 Gene3D G3DSA:2.60.40.1070 151 223 3.2E-19 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 Gene3D G3DSA:2.60.40.360 28 146 6.4E-42 T 06-07-2017 IPR008962 PapD-like LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 SUPERFAMILY SSF49354 28 146 6.76E-40 T 06-07-2017 IPR008962 PapD-like LFZ55_RS20210 7ffdd0548839aa99ed1a4251c6ecedbf 228 SUPERFAMILY SSF49584 140 222 4.32E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS05060 e1b59d8a11dbe53b04f4ce8ff70eddf7 199 Pfam PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) 17 189 2.3E-58 T 06-07-2017 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 LFZ55_RS05060 e1b59d8a11dbe53b04f4ce8ff70eddf7 199 TIGRFAM TIGR02555 OrgA_MxiK: type III secretion apparatus protein OrgA/MxiK 17 199 6.2E-70 T 06-07-2017 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 Gene3D G3DSA:3.40.190.10 154 322 1.0E-57 T 06-07-2017 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 357 376 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 171 190 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 151 170 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 233 252 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 36 54 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 70 88 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 130 149 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 PRINTS PR00181 Maltose binding protein signature 299 320 4.9E-100 T 06-07-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 343 5.6E-42 T 06-07-2017 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 Gene3D G3DSA:3.40.190.10 32 153 1.0E-32 T 06-07-2017 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 SUPERFAMILY SSF53850 29 395 2.02E-96 T 06-07-2017 LFZ55_RS22545 3b723979f17ace787085f4d7ef53a52c 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 06-07-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Pfam PF00975 Thioesterase domain 1068 1284 2.7E-43 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:1.10.1200.10 968 1045 1.7E-18 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SUPERFAMILY SSF52777 190 426 9.23E-32 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SUPERFAMILY SSF47336 970 1042 5.76E-12 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Pfam PF00668 Condensation domain 3 300 1.9E-62 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SUPERFAMILY SSF52777 9 183 1.06E-29 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:3.30.300.30 857 962 1.7E-27 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 887 2.1E-126 T 06-07-2017 IPR010071 Amino acid adenylation domain LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SUPERFAMILY SSF53474 1053 1292 7.54E-46 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SUPERFAMILY SSF56801 421 989 1.7E-147 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:3.40.50.980 622 775 3.1E-43 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:3.40.50.1820 1056 1171 4.6E-39 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:3.40.50.1820 1226 1293 4.6E-39 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 SMART SM00824 Thioesterase 1070 1239 0.001 T 06-07-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Pfam PF00501 AMP-binding enzyme 462 863 2.5E-96 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Pfam PF00550 Phosphopantetheine attachment site 980 1041 1.1E-10 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:2.30.38.10 776 853 5.9E-27 T 06-07-2017 LFZ55_RS17625 fea3ec8e234c7e85cf02742ecb8391de 1294 Gene3D G3DSA:3.40.50.980 456 621 3.6E-43 T 06-07-2017 LFZ55_RS11170 b6266fb3ef076a690181d2070f23ad0b 206 Pfam PF01300 Telomere recombination 23 198 1.3E-45 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 LFZ55_RS11170 b6266fb3ef076a690181d2070f23ad0b 206 Gene3D G3DSA:3.90.870.10 2 202 1.2E-63 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS11170 b6266fb3ef076a690181d2070f23ad0b 206 SUPERFAMILY SSF55821 1 204 1.01E-65 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS11170 b6266fb3ef076a690181d2070f23ad0b 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 5.6E-77 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 Gene3D G3DSA:1.10.10.10 3 133 1.4E-31 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 SMART SM00347 22 122 2.1E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 7.5E-55 T 06-07-2017 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 5.3E-6 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 5.3E-6 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 5.3E-6 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 SUPERFAMILY SSF46785 4 135 1.74E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 Pfam PF01047 MarR family 29 86 5.4E-14 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS15010 555cd3494f5275db189df21f0926b000 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS07715 67b5fa3194bfc00e0166dadad8a091a9 431 SUPERFAMILY SSF56322 14 427 5.36E-98 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS07715 67b5fa3194bfc00e0166dadad8a091a9 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 92 426 2.4E-118 T 06-07-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 LFZ55_RS07715 67b5fa3194bfc00e0166dadad8a091a9 431 Gene3D G3DSA:3.60.120.10 38 430 8.0E-78 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS07715 67b5fa3194bfc00e0166dadad8a091a9 431 Pfam PF00425 chorismate binding enzyme 168 419 1.6E-62 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal LFZ55_RS07715 67b5fa3194bfc00e0166dadad8a091a9 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 429 41.18 T 06-07-2017 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 Gene3D G3DSA:1.10.357.10 11 191 1.7E-39 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 SUPERFAMILY SSF48498 85 171 1.87E-13 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.2E-10 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-10 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.8E-19 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 SUPERFAMILY SSF46689 10 78 2.69E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS03590 61c9123d3ea01dd16cc5e490ec857b5d 198 Pfam PF13977 Bacterial transcriptional repressor 86 170 7.8E-8 T 06-07-2017 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 7.4E-46 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Gene3D G3DSA:3.40.50.970 326 533 1.9E-79 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Gene3D G3DSA:3.40.50.920 537 663 1.4E-49 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 06-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 SMART SM00861 354 524 3.2E-66 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 SUPERFAMILY SSF52518 334 525 2.14E-67 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 SUPERFAMILY SSF52922 532 664 1.07E-43 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 1.0E-170 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Gene3D G3DSA:3.40.50.970 4 320 1.6E-130 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 SUPERFAMILY SSF52518 4 320 1.02E-119 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 Pfam PF02780 Transketolase, C-terminal domain 543 654 1.4E-19 T 06-07-2017 IPR033248 Transketolase, C-terminal domain LFZ55_RS06870 28bfb4f7e7940d1c26d92e5fb86e4e9d 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 663 0.0 T 06-07-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 SMART SM00342 181 264 1.0E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 SUPERFAMILY SSF51182 17 112 2.12E-12 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 Pfam PF07883 Cupin domain 21 73 2.2E-8 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 Gene3D G3DSA:2.60.120.10 19 85 1.6E-11 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 6.1E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 6.1E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 SUPERFAMILY SSF46689 217 267 3.4E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 Gene3D G3DSA:1.10.10.60 217 266 4.2E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16760 b85e31e4fae7ef274f66ba53f0ea9350 275 Pfam PF12833 Helix-turn-helix domain 190 265 1.4E-17 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 Gene3D G3DSA:2.30.30.60 129 178 7.1E-19 T 06-07-2017 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 Gene3D G3DSA:3.30.70.100 182 266 3.8E-32 T 06-07-2017 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 Pfam PF00924 Mechanosensitive ion channel 72 268 2.0E-58 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 SUPERFAMILY SSF82689 181 278 3.79E-33 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 SUPERFAMILY SSF50182 114 179 1.24E-16 T 06-07-2017 IPR010920 LSM domain LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 SUPERFAMILY SSF82861 28 112 1.96E-17 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS03990 19cca04a98fed3b342252fde4f1f87b8 286 Pfam PF05552 Conserved TM helix 15 64 8.2E-14 T 06-07-2017 IPR008910 Conserved TM helix LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 06-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 Gene3D G3DSA:3.30.470.20 94 219 1.5E-50 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 Gene3D G3DSA:3.30.200.20 7 93 9.7E-33 T 06-07-2017 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 Pfam PF01259 SAICAR synthetase 6 230 7.9E-58 T 06-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 06-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.868 T 06-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 SUPERFAMILY SSF56104 3 232 2.94E-75 T 06-07-2017 LFZ55_RS06800 50056d91a25498c80a45e4e0d3be2e66 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 5.5E-84 T 06-07-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 LFZ55_RS01065 b49204e0a223f1cee27d61ee1e00a9b3 46 Gene3D G3DSA:3.90.1150.10 1 43 6.0E-9 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS01065 b49204e0a223f1cee27d61ee1e00a9b3 46 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 1 40 2.5E-8 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LFZ55_RS01065 b49204e0a223f1cee27d61ee1e00a9b3 46 SUPERFAMILY SSF53383 1 40 9.15E-7 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 SUPERFAMILY SSF51246 331 444 6.28E-44 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.5E-85 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Gene3D G3DSA:3.30.470.20 204 444 8.7E-100 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Gene3D G3DSA:3.30.1490.20 130 203 3.4E-29 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 1.0E-249 T 06-07-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Gene3D G3DSA:3.40.50.20 1 129 1.5E-50 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 SUPERFAMILY SSF56059 83 347 1.94E-69 T 06-07-2017 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 SMART SM00878 336 441 4.7E-65 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.8E-44 T 06-07-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS02345 2f3bcfd8b8a88ac75e347d00b4ddb997 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.3E-38 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 499 639 4.0E-59 T 06-07-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 SUPERFAMILY SSF48019 243 366 1.02E-36 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 416 497 3.4E-21 T 06-07-2017 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 4.8E-133 T 06-07-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Gene3D G3DSA:1.20.272.10 243 361 3.5E-49 T 06-07-2017 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Gene3D G3DSA:1.10.8.60 167 242 3.8E-33 T 06-07-2017 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 SMART SM00382 37 178 1.4E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 SUPERFAMILY SSF52540 35 221 5.02E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.4E-42 T 06-07-2017 LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Gene3D G3DSA:3.40.50.300 15 166 1.9E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18030 d7dd7371c51ba69985986526e59b9763 642 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 9.9E-33 T 06-07-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 3.8E-37 T 06-07-2017 IPR024757 Cell division protein FtsZ, C-terminal LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 06-07-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 SMART SM00865 206 324 3.4E-56 T 06-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.221 T 06-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 Gene3D G3DSA:3.40.50.1440 13 213 2.5E-93 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 Gene3D G3DSA:3.30.1330.20 214 321 4.3E-47 T 06-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 SUPERFAMILY SSF52490 12 207 1.83E-69 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 SMART SM00864 12 204 4.5E-111 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 06-07-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 334 8.3E-142 T 06-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-42 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LFZ55_RS19710 574c9f0011ebc34148fdf6c2a505b1fb 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 06-07-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 4.3E-25 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:3.40.228.10 179 291 3.6E-58 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:3.40.228.10 325 398 3.6E-58 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 06-07-2017 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 SMART SM00926 39 93 4.0E-14 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:2.20.25.90 37 95 2.7E-20 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.3E-4 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.489 T 06-07-2017 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:3.40.50.740 399 575 3.2E-77 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:3.40.50.740 96 178 3.2E-77 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:3.40.50.740 621 665 3.2E-77 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Gene3D G3DSA:2.40.40.20 666 828 2.7E-46 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 SUPERFAMILY SSF53706 37 700 4.45E-203 T 06-07-2017 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 SUPERFAMILY SSF50692 688 828 1.27E-41 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 7.0E-92 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07930 13ce275f313e0460348bf9afce479caf 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 3.2E-17 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07500 b31a868372a9a4ff739fd893c3412a5a 235 Gene3D G3DSA:1.10.3720.10 19 228 1.7E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07500 b31a868372a9a4ff739fd893c3412a5a 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 227 1.8E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07500 b31a868372a9a4ff739fd893c3412a5a 235 SUPERFAMILY SSF161098 17 224 1.44E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07500 b31a868372a9a4ff739fd893c3412a5a 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.5E-13 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 SMART SM00014 105 217 2.1E-33 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 152 159 - T 06-07-2017 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PRINTS PR00483 Bacterial acid phosphatase class A signature 180 204 1.3E-47 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PRINTS PR00483 Bacterial acid phosphatase class A signature 57 76 1.3E-47 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PRINTS PR00483 Bacterial acid phosphatase class A signature 122 140 1.3E-47 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PRINTS PR00483 Bacterial acid phosphatase class A signature 148 174 1.3E-47 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PRINTS PR00483 Bacterial acid phosphatase class A signature 214 232 1.3E-47 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 SUPERFAMILY SSF48317 32 236 6.41E-42 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 Gene3D G3DSA:1.20.144.10 18 237 1.2E-51 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 Pfam PF01569 PAP2 superfamily 112 213 6.5E-15 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS11975 0246bdc318eca418b1834190d1d161ce 244 PIRSF PIRSF000897 6 244 1.5E-92 T 06-07-2017 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Gene3D G3DSA:3.30.70.260 294 378 9.9E-26 T 06-07-2017 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Gene3D G3DSA:1.20.59.10 1 105 4.3E-45 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 7.6E-39 T 06-07-2017 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Pfam PF00800 Prephenate dehydratase 106 286 1.2E-58 T 06-07-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 06-07-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 SMART SM00830 11 91 1.4E-25 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 SUPERFAMILY SSF53850 105 291 1.06E-53 T 06-07-2017 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 PIRSF PIRSF001500 1 380 8.4E-141 T 06-07-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Gene3D G3DSA:3.40.190.10 193 268 5.6E-26 T 06-07-2017 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 SUPERFAMILY SSF48600 6 93 2.01E-22 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 SUPERFAMILY SSF55021 280 377 2.44E-22 T 06-07-2017 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Gene3D G3DSA:3.40.190.10 106 192 5.9E-32 T 06-07-2017 LFZ55_RS05830 c2e939bebe765fdebf1fdb10e1b86a99 386 Pfam PF01817 Chorismate mutase type II 11 89 2.7E-16 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:3.40.50.740 157 259 1.5E-31 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:3.40.50.740 709 729 1.5E-31 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:3.40.50.740 608 677 1.5E-31 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Pfam PF01568 Molydopterin dinucleotide binding domain 890 987 1.0E-12 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:2.20.25.90 72 156 3.1E-13 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 SMART SM00926 71 152 7.7E-18 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:3.40.228.10 260 374 3.3E-40 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:3.40.228.10 457 561 3.3E-40 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Pfam PF00384 Molybdopterin oxidoreductase 241 682 1.1E-12 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 75 152 8.9E-7 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 SUPERFAMILY SSF53706 72 109 1.05E-116 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 SUPERFAMILY SSF53706 136 865 1.05E-116 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 Gene3D G3DSA:2.40.40.20 854 1020 2.0E-25 T 06-07-2017 LFZ55_RS13310 cbcb17dd67245b693efe233aff69352d 1020 SUPERFAMILY SSF50692 872 993 1.22E-24 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 Pfam PF03887 YfbU domain 1 164 6.8E-69 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 PIRSF PIRSF006272 1 164 4.4E-81 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 Gene3D G3DSA:1.10.287.680 1 52 2.4E-31 T 06-07-2017 IPR023145 YfbU, helix-hairpin domain LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 Gene3D G3DSA:1.10.3190.10 53 164 4.2E-51 T 06-07-2017 IPR023146 YfbU, alpha-helical bundle domain LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.462 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 3.0E-95 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU LFZ55_RS07590 aa671c5181a42ce618ea41db879233f4 164 SUPERFAMILY SSF116960 1 164 1.23E-70 T 06-07-2017 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 Pfam PF01522 Polysaccharide deacetylase 15 160 1.3E-8 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 66.544 T 06-07-2017 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 Gene3D G3DSA:3.20.20.370 82 267 5.5E-23 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 Gene3D G3DSA:3.20.20.370 14 38 5.5E-23 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 SUPERFAMILY SSF88713 4 38 1.17E-24 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS07765 bc8e0dbc943fec7b959ff32a723a10f7 299 SUPERFAMILY SSF88713 82 282 1.17E-24 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 11 599 3.0E-279 T 06-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 3.2E-22 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Gene3D G3DSA:3.40.50.80 455 599 3.8E-58 T 06-07-2017 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Gene3D G3DSA:2.40.30.10 229 280 1.5E-39 T 06-07-2017 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Gene3D G3DSA:2.40.30.10 384 454 1.5E-39 T 06-07-2017 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 SUPERFAMILY SSF52218 60 208 1.15E-42 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 3.9E-30 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00369 Flavodoxin signature 65 78 5.7E-13 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00369 Flavodoxin signature 113 124 5.7E-13 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00369 Flavodoxin signature 169 188 5.7E-13 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PRINTS PR00369 Flavodoxin signature 145 155 5.7E-13 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 SUPERFAMILY SSF63380 227 446 6.81E-63 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Pfam PF00258 Flavodoxin 67 193 2.8E-30 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Pfam PF00667 FAD binding domain 230 424 1.3E-23 T 06-07-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 SUPERFAMILY SSF52343 444 599 1.44E-51 T 06-07-2017 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Gene3D G3DSA:3.40.50.360 57 209 1.1E-45 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 PIRSF PIRSF000207 1 599 5.7E-276 T 06-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 52.27 T 06-07-2017 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 LFZ55_RS04700 b1dad881894c99c114ba304d3cba3b5c 599 Gene3D G3DSA:1.20.990.10 281 383 1.6E-38 T 06-07-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 06-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 Gene3D G3DSA:3.40.50.1240 2 250 2.6E-99 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 1.6E-30 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 2.8E-130 T 06-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 SMART SM00855 5 191 3.1E-28 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 SUPERFAMILY SSF53254 4 247 9.26E-78 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS16770 06059db72b36e68405d6aa499d9c0aec 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.985 T 06-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 Gene3D G3DSA:3.30.420.40 14 148 1.1E-22 T 06-07-2017 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 Gene3D G3DSA:3.30.420.40 149 246 2.3E-35 T 06-07-2017 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 SUPERFAMILY SSF53067 31 132 1.31E-11 T 06-07-2017 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 Pfam PF14450 Cell division protein FtsA 142 246 1.3E-8 T 06-07-2017 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 SUPERFAMILY SSF53067 142 261 1.1E-19 T 06-07-2017 LFZ55_RS06940 85bcf937cb33c5e8051baa2ff003ff99 279 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 34 267 1.3E-110 T 06-07-2017 IPR013366 Ethanolamine utilisation EutJ LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 Gene3D G3DSA:3.40.50.2300 102 205 1.1E-41 T 06-07-2017 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 Pfam PF02378 Phosphotransferase system, EIIC 232 495 2.9E-18 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 SUPERFAMILY SSF52794 104 205 9.07E-35 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 SUPERFAMILY SSF52794 4 88 1.74E-9 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 106 189 1.3E-38 T 06-07-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 215 551 1.0E-148 T 06-07-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LFZ55_RS08235 3b24876ef4b5ca32064a6885f0d0c41b 562 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 107 193 5.8E-18 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS10660 0cec29795687206b3273e496a46e503f 352 SUPERFAMILY SSF48208 37 351 1.19E-54 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS10660 0cec29795687206b3273e496a46e503f 352 Pfam PF07470 Glycosyl Hydrolase Family 88 19 351 6.2E-75 T 06-07-2017 IPR010905 Glycosyl hydrolase, family 88 LFZ55_RS10660 0cec29795687206b3273e496a46e503f 352 Gene3D G3DSA:1.50.10.10 4 351 1.3E-84 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 06-07-2017 LFZ55_RS02145 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Pfam PF01464 Transglycosylase SLT domain 297 399 2.6E-22 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 SUPERFAMILY SSF53955 245 398 7.79E-34 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 SUPERFAMILY SSF53955 433 444 7.79E-34 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 SUPERFAMILY SSF53850 45 268 3.72E-32 T 06-07-2017 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 472 46.813 T 06-07-2017 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 SMART SM00062 44 269 2.7E-40 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Gene3D G3DSA:1.10.530.10 288 462 3.2E-36 T 06-07-2017 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 268 3.9E-26 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Gene3D G3DSA:3.40.190.10 227 267 1.1E-13 T 06-07-2017 LFZ55_RS06050 88fd31be6ce4a2166ebdab93babef509 514 Gene3D G3DSA:3.40.190.10 41 129 1.1E-13 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.2E-38 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 SUPERFAMILY SSF56425 227 358 2.09E-42 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Gene3D G3DSA:1.20.58.100 427 537 2.8E-38 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Pfam PF00890 FAD binding domain 7 397 6.1E-114 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Gene3D G3DSA:4.10.80.40 543 577 5.4E-18 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 SUPERFAMILY SSF51905 361 416 7.47E-71 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 SUPERFAMILY SSF51905 3 250 7.47E-71 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 06-07-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 06-07-2017 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Gene3D G3DSA:3.90.700.10 234 352 9.9E-37 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 PIRSF PIRSF000171 1 574 1.2E-41 T 06-07-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 SUPERFAMILY SSF46977 444 584 1.3E-45 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.4E-5 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Gene3D G3DSA:3.50.50.60 353 416 2.1E-104 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 Gene3D G3DSA:3.50.50.60 3 233 2.1E-104 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-9 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.6E-9 T 06-07-2017 LFZ55_RS21810 b24e41f49608133f675a1255a675e4f5 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.0E-248 T 06-07-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS09000 ccd63484d9d6f479ed2104c2484f23ed 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 4.0E-14 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS09000 ccd63484d9d6f479ed2104c2484f23ed 91 SUPERFAMILY SSF159133 1 89 4.45E-27 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS09000 ccd63484d9d6f479ed2104c2484f23ed 91 Gene3D G3DSA:2.40.50.220 1 90 1.5E-33 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS09000 ccd63484d9d6f479ed2104c2484f23ed 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 1.5E-30 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS20825 f44be94bbbf479cb396e0e453db2aef1 302 Gene3D G3DSA:2.30.30.330 146 212 5.7E-17 T 06-07-2017 LFZ55_RS20825 f44be94bbbf479cb396e0e453db2aef1 302 Gene3D G3DSA:2.30.30.330 7 103 5.7E-17 T 06-07-2017 LFZ55_RS20825 f44be94bbbf479cb396e0e453db2aef1 302 SUPERFAMILY SSF54001 150 185 5.59E-16 T 06-07-2017 LFZ55_RS20825 f44be94bbbf479cb396e0e453db2aef1 302 SUPERFAMILY SSF54001 8 107 5.59E-16 T 06-07-2017 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 SMART SM01005 234 358 1.0E-60 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.8E-145 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 Gene3D G3DSA:2.40.37.10 213 359 1.4E-53 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 1.5E-36 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 SUPERFAMILY SSF50621 227 359 1.08E-43 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 SUPERFAMILY SSF51419 8 235 3.34E-68 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 267 282 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 288 305 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 26 42 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 155 166 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 340 353 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 250 265 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 60 78 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 120 132 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 PRINTS PR00992 Alanine racemase signature 192 219 2.1E-76 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 Gene3D G3DSA:3.20.20.10 11 212 6.8E-75 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 06-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 9.0E-71 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS22450 9dd6055fcae57c71d9e63b430cd72632 359 Hamap MF_01201 Alanine racemase. 1 358 34.596 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 74.547 T 06-07-2017 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 SUPERFAMILY SSF53686 7 326 3.93E-85 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 Gene3D G3DSA:3.40.50.1100 112 325 6.5E-67 T 06-07-2017 LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 2.0E-54 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 PIRSF PIRSF006278 2 328 1.0E-92 T 06-07-2017 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase LFZ55_RS09655 c8ce577506e34e0b42249c0308b8a958 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 6.7E-137 T 06-07-2017 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 LFZ55_RS12610 6b0edde72b0d7010bf44edd7fc724762 175 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 25 167 1.0E-48 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS12610 6b0edde72b0d7010bf44edd7fc724762 175 SUPERFAMILY SSF142433 16 171 1.27E-41 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS12610 6b0edde72b0d7010bf44edd7fc724762 175 Pfam PF02464 Competence-damaged protein 18 168 4.3E-48 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS12610 6b0edde72b0d7010bf44edd7fc724762 175 Gene3D G3DSA:3.90.950.20 15 173 9.2E-45 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS15420 ab6040a0d19195cbbd205fdc9b1cb22d 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 72 6.0E-18 T 06-07-2017 IPR009329 Protein of unknown function DUF987 LFZ55_RS15420 ab6040a0d19195cbbd205fdc9b1cb22d 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 5.6E-32 T 06-07-2017 IPR009329 Protein of unknown function DUF987 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 Hamap MF_01987 Ribokinase [rbsK]. 97 397 21.429 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 SMART SM00420 6 58 3.5E-10 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 Gene3D G3DSA:3.40.1190.20 98 399 7.6E-77 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 SUPERFAMILY SSF53613 98 395 8.57E-69 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 PRINTS PR00990 Ribokinase signature 128 147 5.0E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 PRINTS PR00990 Ribokinase signature 269 284 5.0E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 PRINTS PR00990 Ribokinase signature 101 122 5.0E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 PRINTS PR00990 Ribokinase signature 313 324 5.0E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 PRINTS PR00990 Ribokinase signature 201 214 5.0E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.3E-11 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 Pfam PF00294 pfkB family carbohydrate kinase 98 387 6.3E-70 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 Gene3D G3DSA:1.10.10.10 1 51 7.8E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13315 ac20a7546ba0e7d665362f4726d389b4 408 SUPERFAMILY SSF46785 4 59 6.04E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 SUPERFAMILY SSF109998 203 240 4.32E-37 T 06-07-2017 IPR027304 Trigger factor/SurA domain LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 SUPERFAMILY SSF109998 39 169 4.32E-37 T 06-07-2017 IPR027304 Trigger factor/SurA domain LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 Gene3D G3DSA:3.10.50.40 259 380 9.4E-30 T 06-07-2017 LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 SUPERFAMILY SSF54534 224 354 3.14E-22 T 06-07-2017 LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 Pfam PF13624 SurA N-terminal domain 1 165 3.6E-53 T 06-07-2017 LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 Pfam PF13145 PPIC-type PPIASE domain 376 484 1.8E-6 T 06-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LFZ55_RS18200 6c2df67f99218a88482f77df34ee87af 623 Pfam PF13145 PPIC-type PPIASE domain 247 369 1.2E-23 T 06-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 Pfam PF00005 ABC transporter 18 153 5.4E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 SMART SM00382 26 202 8.7E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 SUPERFAMILY SSF52540 2 185 4.66E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 197 1.0E-79 T 06-07-2017 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 Gene3D G3DSA:3.40.50.300 1 185 1.8E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07955 67964edb5d37befad5d5394c63b03d0e 205 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 SUPERFAMILY SSF51011 601 682 5.39E-18 T 06-07-2017 LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 SUPERFAMILY SSF51445 251 598 3.64E-70 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 Pfam PF01055 Glycosyl hydrolases family 31 242 685 4.9E-114 T 06-07-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 SUPERFAMILY SSF74650 4 247 2.61E-48 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 Pfam PF17137 Domain of unknown function (DUF5110) 705 769 5.4E-7 T 06-07-2017 IPR033403 Domain of unknown function DUF5110 LFZ55_RS16425 c01a757606213b7b627574af7eb2a881 791 Pfam PF13802 Galactose mutarotase-like 150 217 7.0E-22 T 06-07-2017 IPR025887 Glycoside hydrolase family 31, N-terminal domain LFZ55_RS23180 75db64f7132d8e3c140147b876290f06 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 48.282 T 06-07-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LFZ55_RS23180 75db64f7132d8e3c140147b876290f06 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 5.3E-111 T 06-07-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LFZ55_RS23180 75db64f7132d8e3c140147b876290f06 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 4.3E-224 T 06-07-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 06-07-2017 IPR028299 ClpA/B, conserved site 2 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 06-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Gene3D G3DSA:3.40.50.300 552 777 4.1E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SMART SM01086 766 855 5.0E-37 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SMART SM00382 597 738 5.0E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SMART SM00382 198 343 5.7E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SUPERFAMILY SSF81923 4 156 9.68E-43 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Gene3D G3DSA:1.10.1780.10 1 147 1.3E-47 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.2E-11 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.7E-14 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SUPERFAMILY SSF52540 159 545 1.85E-99 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Gene3D G3DSA:1.10.8.60 778 855 2.9E-30 T 06-07-2017 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Gene3D G3DSA:1.10.8.60 343 427 5.3E-37 T 06-07-2017 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.9E-55 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 SUPERFAMILY SSF52540 546 851 2.36E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.5E-28 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.0E-13 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 Gene3D G3DSA:3.40.50.300 160 341 3.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05855 fb83e206d3a5dcced8449e519c642f98 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 06-07-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.435 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 5.5E-85 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 Gene3D G3DSA:3.40.50.620 1 220 7.8E-86 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 SUPERFAMILY SSF52402 1 218 1.76E-70 T 06-07-2017 LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 PIRSF PIRSF006293 1 226 2.0E-87 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 LFZ55_RS18185 698511170d4cfc220e1a8aa8ce47b552 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 1.2E-87 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 LFZ55_RS16510 3288db4f216dfa43e6f923a352ba0bac 324 Gene3D G3DSA:1.20.970.10 7 69 1.3E-18 T 06-07-2017 LFZ55_RS16510 3288db4f216dfa43e6f923a352ba0bac 324 Gene3D G3DSA:3.40.1030.10 79 322 8.1E-42 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS16510 3288db4f216dfa43e6f923a352ba0bac 324 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 9.0E-11 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS16510 3288db4f216dfa43e6f923a352ba0bac 324 SUPERFAMILY SSF52418 75 321 2.04E-47 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS16510 3288db4f216dfa43e6f923a352ba0bac 324 SUPERFAMILY SSF47648 7 72 3.79E-15 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS24645 95e3cbca5f3b1a6277757f82cbe32952 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 53 5.2E-10 T 06-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 LFZ55_RS24645 95e3cbca5f3b1a6277757f82cbe32952 76 SUPERFAMILY SSF89447 3 68 2.62E-11 T 06-07-2017 LFZ55_RS24645 95e3cbca5f3b1a6277757f82cbe32952 76 Gene3D G3DSA:2.10.260.10 1 71 3.1E-6 T 06-07-2017 LFZ55_RS24645 95e3cbca5f3b1a6277757f82cbe32952 76 SMART SM00966 7 48 2.7E-5 T 06-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 SMART SM00283 269 516 4.8E-97 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 SUPERFAMILY SSF58104 236 520 1.83E-76 T 06-07-2017 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 Gene3D G3DSA:1.10.287.950 284 488 1.1E-63 T 06-07-2017 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 SMART SM00304 216 268 8.4E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 SUPERFAMILY SSF47170 25 182 6.93E-50 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 Pfam PF00672 HAMP domain 196 265 4.2E-15 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 SMART SM00319 44 182 1.7E-55 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 Gene3D G3DSA:1.20.120.30 35 181 6.4E-60 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 7.3E-92 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 Pfam PF02203 Tar ligand binding domain homologue 1 176 1.0E-56 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS20590 a35de5767962cdf0f7e1189674b77ee6 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.6E-68 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS19495 872c447891570c287d7f568e87cd76e2 308 Gene3D G3DSA:3.40.50.300 2 228 4.6E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19495 872c447891570c287d7f568e87cd76e2 308 SUPERFAMILY SSF52540 3 232 2.87E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19495 872c447891570c287d7f568e87cd76e2 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS19495 872c447891570c287d7f568e87cd76e2 308 Pfam PF00005 ABC transporter 21 165 1.9E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS19495 872c447891570c287d7f568e87cd76e2 308 SMART SM00382 30 213 7.2E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11500 70e99b3b5279fe249ba554a5cab5e9fa 242 Gene3D G3DSA:3.40.630.10 19 218 2.1E-43 T 06-07-2017 LFZ55_RS11500 70e99b3b5279fe249ba554a5cab5e9fa 242 Pfam PF00246 Zinc carboxypeptidase 43 157 3.9E-12 T 06-07-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 LFZ55_RS11500 70e99b3b5279fe249ba554a5cab5e9fa 242 SUPERFAMILY SSF53187 19 107 1.46E-33 T 06-07-2017 LFZ55_RS11500 70e99b3b5279fe249ba554a5cab5e9fa 242 SUPERFAMILY SSF53187 134 214 1.46E-33 T 06-07-2017 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.8E-32 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 SMART SM01230 102 379 1.8E-151 T 06-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 Gene3D G3DSA:3.30.590.10 106 455 1.3E-140 T 06-07-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 Gene3D G3DSA:3.10.20.70 3 105 5.0E-40 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 SUPERFAMILY SSF54368 3 99 3.01E-36 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.7E-220 T 06-07-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 06-07-2017 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.5E-140 T 06-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 SUPERFAMILY SSF55931 102 468 1.86E-139 T 06-07-2017 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 06-07-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 LFZ55_RS23410 859c285d73214f59a5a41153dcd9c03f 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 06-07-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 LFZ55_RS22125 b0e2402e39a6852f15ef5aed30a837af 445 PIRSF PIRSF006060 1 434 8.4E-65 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS22125 b0e2402e39a6852f15ef5aed30a837af 445 Pfam PF13520 Amino acid permease 12 403 1.1E-51 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS09960 8eb4ed23dbfa12d35297e3109dee4304 261 SUPERFAMILY SSF81345 3 257 3.01E-42 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS09960 8eb4ed23dbfa12d35297e3109dee4304 261 Pfam PF00950 ABC 3 transport family 2 257 6.7E-88 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 LFZ55_RS09960 8eb4ed23dbfa12d35297e3109dee4304 261 Gene3D G3DSA:1.10.3470.10 59 259 1.6E-11 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.935 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 Gene3D G3DSA:3.30.360.10 186 487 5.1E-122 T 06-07-2017 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 06-07-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 4.6E-205 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 7.5E-57 T 06-07-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 3.5E-116 T 06-07-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 7.2E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 7.2E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 7.2E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 7.2E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 7.2E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 Gene3D G3DSA:3.40.50.720 7 185 3.0E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 SUPERFAMILY SSF51735 4 189 2.23E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 PIRSF PIRSF000110 1 491 3.0E-180 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LFZ55_RS10010 e55cf30b7ce1ee2105a30b6a3dcb043d 491 SUPERFAMILY SSF55347 176 488 3.6E-113 T 06-07-2017 LFZ55_RS00995 1319b174e80d85ce506dd5f0e2a12574 146 SUPERFAMILY SSF55729 1 138 4.69E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS00995 1319b174e80d85ce506dd5f0e2a12574 146 Pfam PF13673 Acetyltransferase (GNAT) domain 37 125 1.9E-15 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS00995 1319b174e80d85ce506dd5f0e2a12574 146 Gene3D G3DSA:3.40.630.30 1 143 2.2E-23 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06930 95b7930f20b3c1deebe8fd7e4e435277 99 SUPERFAMILY SSF159133 5 98 7.85E-30 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS06930 95b7930f20b3c1deebe8fd7e4e435277 99 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 15 87 5.0E-35 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS06930 95b7930f20b3c1deebe8fd7e4e435277 99 Gene3D G3DSA:2.40.50.220 5 99 7.9E-34 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS06930 95b7930f20b3c1deebe8fd7e4e435277 99 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 5 87 1.3E-28 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 Pfam PF02033 Ribosome-binding factor A 7 112 3.3E-32 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 Gene3D G3DSA:3.30.300.20 1 107 2.1E-39 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 SUPERFAMILY SSF89919 2 107 1.26E-35 T 06-07-2017 IPR023799 Ribosome-binding factor A domain LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.272 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 3.9E-45 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 1.0E-47 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 LFZ55_RS02795 4ee82a20a80732a6a8a5692edb3a43b4 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 06-07-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 LFZ55_RS01295 ca606a5305cb22d4b60471488eee9be0 167 Pfam PF02082 Transcriptional regulator 4 85 1.2E-24 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS01295 ca606a5305cb22d4b60471488eee9be0 167 Gene3D G3DSA:1.10.10.10 4 151 1.1E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01295 ca606a5305cb22d4b60471488eee9be0 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 06-07-2017 IPR030489 Transcription regulator Rrf2-type, conserved site LFZ55_RS01295 ca606a5305cb22d4b60471488eee9be0 167 SUPERFAMILY SSF46785 5 146 1.59E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01295 ca606a5305cb22d4b60471488eee9be0 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 2.5E-29 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS01395 c917f4752b4a573d3519fd89c22569c5 90 Pfam PF06611 Protein of unknown function (DUF1145) 2 59 5.1E-26 T 06-07-2017 IPR009525 Protein of unknown function DUF1145 LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 SUPERFAMILY SSF52540 4 243 9.98E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 Pfam PF00005 ABC transporter 20 161 9.6E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 Gene3D G3DSA:2.40.50.140 288 345 1.9E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 SUPERFAMILY SSF50331 236 364 1.38E-31 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 SMART SM00382 28 211 5.1E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 Gene3D G3DSA:2.40.50.100 239 287 1.7E-22 T 06-07-2017 LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 Pfam PF08402 TOBE domain 281 353 5.1E-12 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LFZ55_RS22540 a423aa4baf43627b3bc522bc70435cc7 369 Gene3D G3DSA:3.40.50.300 3 236 4.6E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08150 0ccddda1e6245276f55a00d36e83ab5f 518 SMART SM00052 260 505 4.3E-96 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08150 0ccddda1e6245276f55a00d36e83ab5f 518 Pfam PF12792 CSS motif domain associated with EAL 43 240 1.0E-41 T 06-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LFZ55_RS08150 0ccddda1e6245276f55a00d36e83ab5f 518 SUPERFAMILY SSF141868 267 512 2.35E-71 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08150 0ccddda1e6245276f55a00d36e83ab5f 518 Gene3D G3DSA:3.20.20.450 267 511 5.9E-73 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08150 0ccddda1e6245276f55a00d36e83ab5f 518 Pfam PF00563 EAL domain 267 500 2.9E-66 T 06-07-2017 IPR001633 EAL domain LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 1.9E-41 T 06-07-2017 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.3E-44 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 Gene3D G3DSA:1.20.1250.20 12 194 3.8E-33 T 06-07-2017 LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 Gene3D G3DSA:1.20.1250.20 211 393 3.6E-11 T 06-07-2017 LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 SUPERFAMILY SSF103473 8 395 7.06E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08115 51a7fa42c442aa6cf94f44a1fb97bd5b 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 4.0E-156 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LFZ55_RS17550 9e26842818a7bd08875af28fb092cb0b 386 Gene3D G3DSA:3.90.1150.10 272 383 1.3E-23 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS17550 9e26842818a7bd08875af28fb092cb0b 386 Pfam PF00155 Aminotransferase class I and II 32 383 1.8E-59 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS17550 9e26842818a7bd08875af28fb092cb0b 386 Gene3D G3DSA:3.40.640.10 47 271 5.0E-71 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS17550 9e26842818a7bd08875af28fb092cb0b 386 SUPERFAMILY SSF53383 11 385 1.24E-98 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 Gene3D G3DSA:3.20.20.120 119 398 7.0E-101 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 1.1E-270 T 06-07-2017 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 5.5E-37 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 SMART SM00922 185 285 1.6E-14 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 SUPERFAMILY SSF51604 139 415 1.61E-81 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 SUPERFAMILY SSF54826 8 137 6.19E-30 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS04640 8c496e7e97555449d927b0f522f13d81 446 Gene3D G3DSA:3.30.390.10 11 118 4.4E-8 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 SUPERFAMILY SSF48168 13 174 3.4E-65 T 06-07-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 1.8E-33 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 9.1E-140 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 1.2E-12 T 06-07-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.8E-27 T 06-07-2017 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 06-07-2017 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Gene3D G3DSA:3.20.70.20 577 693 7.0E-57 T 06-07-2017 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Gene3D G3DSA:3.20.70.20 108 297 7.0E-57 T 06-07-2017 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 Gene3D G3DSA:3.20.70.20 350 513 7.0E-57 T 06-07-2017 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 SUPERFAMILY SSF51998 175 698 1.28E-185 T 06-07-2017 LFZ55_RS05380 56d2a5abd619bbd6ba35a48200361402 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 1.5E-157 T 06-07-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 Gene3D G3DSA:3.90.470.20 1 125 1.4E-41 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 SUPERFAMILY SSF56214 3 125 1.27E-29 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 4.0E-40 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 5.7E-59 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.422 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 3.2E-39 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LFZ55_RS06015 4719179d89670062ed66cd2879402204 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 1.3E-23 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Gene3D G3DSA:3.40.30.10 4 109 2.8E-28 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Pfam PF14561 Tetratricopeptide repeat 195 284 7.5E-27 T 06-07-2017 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 SUPERFAMILY SSF52833 2 112 1.1E-30 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Pfam PF00085 Thioredoxin 6 108 4.0E-19 T 06-07-2017 IPR013766 Thioredoxin domain GO:0045454 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Gene3D G3DSA:1.25.40.10 110 196 3.9E-37 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.3E-23 T 06-07-2017 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 SUPERFAMILY SSF48452 115 246 2.2E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS17925 be78c3caca11309e051cbcc16fc05c10 284 Gene3D G3DSA:1.25.40.10 197 284 1.6E-31 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SUPERFAMILY SSF55785 140 267 1.12E-20 T 06-07-2017 IPR000014 PAS domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.3E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SMART SM00073 675 772 2.3E-20 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 5.4E-14 T 06-07-2017 IPR000014 PAS domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 PIRSF PIRSF003182 1 778 0.0 T 06-07-2017 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Pfam PF01627 Hpt domain 686 758 8.0E-11 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SUPERFAMILY SSF47226 663 773 6.41E-28 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:1.10.287.970 1 89 1.4E-41 T 06-07-2017 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.5E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:3.40.50.2300 524 649 2.6E-31 T 06-07-2017 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Pfam PF00072 Response regulator receiver domain 528 639 2.1E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 1.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 1.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.1E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SUPERFAMILY SSF47384 269 347 3.73E-17 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SUPERFAMILY SSF55874 336 503 1.83E-42 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:3.30.450.20 141 267 6.5E-21 T 06-07-2017 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SMART SM00387 394 507 4.8E-36 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:3.30.565.10 348 505 1.5E-44 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Gene3D G3DSA:1.20.120.160 676 775 4.4E-35 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SMART SM00448 526 639 1.9E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SUPERFAMILY SSF52172 525 644 3.84E-27 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 Pfam PF00989 PAS fold 156 266 1.0E-17 T 06-07-2017 IPR013767 PAS fold GO:0006355 LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SMART SM00091 155 221 3.9E-7 T 06-07-2017 IPR000014 PAS domain LFZ55_RS02580 df80f68d42cdf8031cb38045ca8bc273 778 SMART SM00388 282 347 5.4E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 06-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Gene3D G3DSA:3.30.470.20 199 357 8.7E-61 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 4.6E-27 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Gene3D G3DSA:3.20.20.60 483 791 4.8E-103 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Gene3D G3DSA:3.50.30.10 376 472 2.9E-36 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 06-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 SUPERFAMILY SSF52009 350 468 2.09E-35 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 SUPERFAMILY SSF56059 7 386 1.53E-108 T 06-07-2017 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 SUPERFAMILY SSF51621 467 790 5.76E-96 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 349 6.8E-120 T 06-07-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 PIRSF PIRSF000854 4 792 0.0 T 06-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 789 8.1E-60 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LFZ55_RS13415 207b7cc1a54673a03e1eee5c5e628bf8 792 Gene3D G3DSA:3.30.1490.20 8 197 8.2E-69 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 4.5E-14 T 06-07-2017 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.4E-14 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.4E-14 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.4E-14 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 SMART SM00344 6 113 3.7E-44 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 SUPERFAMILY SSF54909 68 152 1.74E-19 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 Gene3D G3DSA:3.30.70.920 70 143 4.0E-23 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 06-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 1.1E-17 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 SUPERFAMILY SSF46785 4 66 5.86E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24035 95917e60ce9c318f5404f8833e9716e6 152 Gene3D G3DSA:1.10.10.10 1 57 8.3E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21645 fb943016db23c0d13a5723c2ae1afa25 249 Pfam PF00326 Prolyl oligopeptidase family 49 248 4.1E-13 T 06-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LFZ55_RS21645 fb943016db23c0d13a5723c2ae1afa25 249 Gene3D G3DSA:3.40.50.1820 4 249 1.4E-52 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS21645 fb943016db23c0d13a5723c2ae1afa25 249 SUPERFAMILY SSF53474 14 249 1.37E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 Pfam PF07883 Cupin domain 38 99 2.2E-7 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 SUPERFAMILY SSF51182 41 123 1.78E-10 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 SMART SM00342 206 289 7.0E-25 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 3.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 3.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 Gene3D G3DSA:2.60.120.10 40 99 4.6E-8 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 Gene3D G3DSA:1.10.10.60 242 292 1.9E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 SUPERFAMILY SSF46689 244 291 5.38E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 6 291 4.7E-118 T 06-07-2017 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 Pfam PF12833 Helix-turn-helix domain 213 291 6.0E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS14970 f4b22c4e44c11ef88a9a13e1137b2913 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Pfam PF00206 Lyase 6 301 2.0E-99 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Gene3D G3DSA:1.20.200.10 108 374 8.3E-104 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.299 T 06-07-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Gene3D G3DSA:1.10.275.10 1 107 6.6E-38 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.5E-23 T 06-07-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 Gene3D G3DSA:1.10.40.30 375 432 1.2E-29 T 06-07-2017 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.6E-213 T 06-07-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 SUPERFAMILY SSF48557 3 456 3.77E-142 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.0E-28 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.0E-28 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.0E-28 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS22955 a9af8db2a5d1f0d8c208682c41769dc5 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.0E-28 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 8.3E-52 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 SUPERFAMILY SSF81338 9 257 1.2E-78 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 Gene3D G3DSA:1.20.1080.10 4 258 7.3E-85 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 4.3E-75 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 06-07-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS23090 6613c0a3fd3857c13b802dd50ded917c 281 Pfam PF00230 Major intrinsic protein 2 251 1.9E-75 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 6.4E-52 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 SMART SM00646 118 273 7.3E-68 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 SUPERFAMILY SSF53187 200 277 4.39E-55 T 06-07-2017 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 SUPERFAMILY SSF53187 57 152 4.39E-55 T 06-07-2017 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 Gene3D G3DSA:3.40.630.40 201 277 5.7E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS06990 660a28df2afbfee9b05f90e52e99b148 289 Gene3D G3DSA:3.40.630.40 57 153 5.7E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS04015 1eab4ecfc947925e1b467416ce00a76c 261 SUPERFAMILY SSF52096 1 260 3.9E-62 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS04015 1eab4ecfc947925e1b467416ce00a76c 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 4.6E-48 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LFZ55_RS04015 1eab4ecfc947925e1b467416ce00a76c 261 Gene3D G3DSA:1.10.12.10 203 260 8.3E-17 T 06-07-2017 IPR014748 Crontonase, C-terminal LFZ55_RS04015 1eab4ecfc947925e1b467416ce00a76c 261 Gene3D G3DSA:3.90.226.10 2 200 1.1E-47 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS04015 1eab4ecfc947925e1b467416ce00a76c 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LFZ55_RS02635 ca940f1bb0939cafd567495c02a7e258 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 1.1E-52 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LFZ55_RS02635 ca940f1bb0939cafd567495c02a7e258 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 183 1.6E-53 T 06-07-2017 IPR010664 Lipopolysaccharide assembly, LptC-related LFZ55_RS02635 ca940f1bb0939cafd567495c02a7e258 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.501 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LFZ55_RS02635 ca940f1bb0939cafd567495c02a7e258 191 PIRSF PIRSF028513 1 186 1.1E-40 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 3.3E-198 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 2.8E-24 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Gene3D G3DSA:3.40.50.220 1 107 8.9E-38 T 06-07-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Gene3D G3DSA:3.90.1150.10 421 600 3.6E-71 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 SUPERFAMILY SSF52172 1 107 1.34E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Gene3D G3DSA:3.90.100.10 602 719 5.3E-39 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 PIRSF PIRSF009393 1 719 2.7E-289 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 SUPERFAMILY SSF55904 571 718 2.09E-47 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 SUPERFAMILY SSF53383 109 567 2.07E-120 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Gene3D G3DSA:3.40.640.10 109 418 4.1E-113 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.7E-48 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS17095 20b7d65bcb665e3cfc4347b265372612 732 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 06-07-2017 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 LFZ55_RS05970 ea2bd9b917957c4a012bfd825a15c65b 159 PIRSF PIRSF004923 1 151 3.0E-41 T 06-07-2017 IPR026268 Protein RseC LFZ55_RS05970 ea2bd9b917957c4a012bfd825a15c65b 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 4.5E-32 T 06-07-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 06-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 294 1.9E-9 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 SUPERFAMILY SSF52518 58 469 1.25E-143 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 SUPERFAMILY SSF52922 702 885 6.28E-64 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 Gene3D G3DSA:3.40.50.970 473 705 3.8E-120 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 SUPERFAMILY SSF52518 474 701 1.17E-98 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 Gene3D G3DSA:3.40.50.970 59 469 2.0E-156 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 PIRSF PIRSF000156 1 887 0.0 T 06-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LFZ55_RS19595 31a3835e8af5004217d93b8cfe4d26c7 887 Gene3D G3DSA:3.40.50.920 707 885 5.1E-77 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 SUPERFAMILY SSF103473 3 422 1.31E-80 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 Pfam PF07690 Major Facilitator Superfamily 303 424 9.4E-10 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 Pfam PF07690 Major Facilitator Superfamily 15 292 4.2E-46 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 Gene3D G3DSA:1.20.1250.20 221 428 1.0E-28 T 06-07-2017 LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 PIRSF PIRSF002808 1 430 1.5E-35 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS03570 ad40db6ae9e3722557b80b010d41fa42 434 Gene3D G3DSA:1.20.1250.20 4 204 1.8E-44 T 06-07-2017 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 SUPERFAMILY SSF51735 240 271 7.08E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 SUPERFAMILY SSF51735 5 130 7.08E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 4.6E-110 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 06-07-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 Gene3D G3DSA:3.40.50.720 4 167 3.2E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.9E-41 T 06-07-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 PIRSF PIRSF000161 4 271 1.3E-91 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 SUPERFAMILY SSF55347 131 240 2.83E-37 T 06-07-2017 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.283 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS20080 00a86968ddc6143cf70296f147371322 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 2.1E-43 T 06-07-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Gene3D G3DSA:3.30.63.10 44 87 4.7E-29 T 06-07-2017 LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Gene3D G3DSA:3.40.50.300 18 43 5.1E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 SMART SM00072 3 187 2.0E-88 T 06-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.9E-76 T 06-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Gene3D G3DSA:3.40.50.300 88 204 1.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Gene3D G3DSA:3.40.50.300 1 17 1.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 06-07-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Pfam PF00625 Guanylate kinase 5 186 6.0E-70 T 06-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 SUPERFAMILY SSF52540 3 189 3.28E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00535 92c6b7b9ac41477566ad4fbdfa5cb4d5 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.369 T 06-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 LFZ55_RS05235 5df93adb2ae5d0bdea138fcc9a435648 120 Gene3D G3DSA:2.40.33.40 1 119 3.6E-44 T 06-07-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS05235 5df93adb2ae5d0bdea138fcc9a435648 120 SUPERFAMILY SSF141530 4 118 2.22E-36 T 06-07-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS05235 5df93adb2ae5d0bdea138fcc9a435648 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 113 3.6E-38 T 06-07-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS05235 5df93adb2ae5d0bdea138fcc9a435648 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 5.0E-58 T 06-07-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 504 521 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Gene3D G3DSA:3.40.50.740 398 639 5.4E-65 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Gene3D G3DSA:3.40.50.740 117 195 5.4E-65 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 15 792 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 SUPERFAMILY SSF53706 54 675 2.66E-160 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 SUPERFAMILY SSF50692 626 792 2.1E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 709 736 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 SMART SM00926 53 112 1.6E-9 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Gene3D G3DSA:3.40.228.10 196 397 2.8E-61 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Pfam PF00384 Molybdopterin oxidoreductase 115 560 7.1E-72 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Gene3D G3DSA:2.40.40.20 648 792 7.7E-50 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Pfam PF01568 Molydopterin dinucleotide binding domain 673 785 1.5E-26 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Gene3D G3DSA:2.20.25.90 53 116 1.5E-14 T 06-07-2017 LFZ55_RS06230 410a306905732c9733d95d4b4242ad32 792 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 112 5.8E-7 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 SUPERFAMILY SSF143414 95 181 1.96E-22 T 06-07-2017 LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 PIRSF PIRSF034834 1 183 2.2E-78 T 06-07-2017 IPR011238 Polyhedral organelle shell protein PduT LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 4.0E-28 T 06-07-2017 LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 1.0E-17 T 06-07-2017 LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 SUPERFAMILY SSF143414 3 91 3.53E-24 T 06-07-2017 LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 Pfam PF00936 BMC domain 4 76 7.7E-22 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 Pfam PF00936 BMC domain 96 173 5.9E-21 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 SMART SM00877 3 77 2.9E-26 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS08975 399c2c8e6e4f6c00dd9c3a20cf3bfe5a 184 SMART SM00877 95 173 2.0E-26 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS16465 330d71a124673de81de225a1db78825c 295 SUPERFAMILY SSF103481 185 278 2.03E-9 T 06-07-2017 LFZ55_RS16465 330d71a124673de81de225a1db78825c 295 SUPERFAMILY SSF103481 46 136 1.7E-6 T 06-07-2017 LFZ55_RS16465 330d71a124673de81de225a1db78825c 295 Pfam PF00892 EamA-like transporter family 148 277 3.1E-17 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 143 9.9E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 Gene3D G3DSA:2.60.40.360 26 143 1.1E-41 T 06-07-2017 IPR008962 PapD-like LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 Gene3D G3DSA:2.60.40.1070 148 238 4.2E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 226 5.5E-12 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 SUPERFAMILY SSF49584 150 239 1.83E-18 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 SUPERFAMILY SSF49354 21 143 2.62E-35 T 06-07-2017 IPR008962 PapD-like LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 PRINTS PR00969 Pili chaperone signature 26 35 1.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 PRINTS PR00969 Pili chaperone signature 71 92 1.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 PRINTS PR00969 Pili chaperone signature 125 140 1.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 PRINTS PR00969 Pili chaperone signature 102 119 1.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS04260 5f1ddb83c5fbcd060284e664337e6133 247 PRINTS PR00969 Pili chaperone signature 161 176 1.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 Gene3D G3DSA:3.30.390.10 1 102 1.2E-46 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 SUPERFAMILY SSF54826 3 112 5.66E-33 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 87 112 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 Gene3D G3DSA:3.20.20.120 120 318 3.5E-60 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 112 6.7E-30 T 06-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 Pfam PF13378 Enolase C-terminal domain-like 133 294 3.7E-26 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 SUPERFAMILY SSF51604 120 309 5.5E-51 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS11495 8e42f9a5ea5b68aed05cb8075757b85c 321 SMART SM00922 130 223 1.8E-17 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LFZ55_RS00675 580bc5413ae70d4e323be9b342c1eca6 404 Pfam PF04932 O-Antigen ligase 195 339 1.5E-13 T 06-07-2017 IPR007016 O-antigen ligase-related LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Gene3D G3DSA:3.30.70.1450 288 359 2.4E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Gene3D G3DSA:3.30.70.1450 212 277 2.1E-5 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.2E-38 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.0E-49 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 7.1E-42 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.0E-47 T 06-07-2017 IPR006512 YidE/YbjL duplication LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 SUPERFAMILY SSF116726 205 271 1.44E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 57.51 T 06-07-2017 IPR023018 Transport protein YidE, putative LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 SUPERFAMILY SSF116726 285 360 6.28E-13 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Pfam PF02080 TrkA-C domain 212 270 7.3E-7 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS00185 43feecd3104d7c8096ef0fe7ae108f26 553 Pfam PF02080 TrkA-C domain 291 358 5.9E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LFZ55_RS22740 0fd511b0b2316143d569afd739a3ef75 223 Pfam PF04493 Endonuclease V 12 206 8.0E-73 T 06-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 LFZ55_RS22740 0fd511b0b2316143d569afd739a3ef75 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 34.718 T 06-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Gene3D G3DSA:2.60.40.1180 625 724 7.5E-37 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 06-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.614 T 06-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 SUPERFAMILY SSF81296 117 223 7.17E-35 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 SUPERFAMILY SSF51011 625 726 4.92E-35 T 06-07-2017 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 1.4E-24 T 06-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 SUPERFAMILY SSF81296 16 115 3.8E-18 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 SMART SM00642 247 596 2.1E-6 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 PIRSF PIRSF000463 6 728 4.0E-283 T 06-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Gene3D G3DSA:3.20.20.80 243 611 2.9E-90 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 SUPERFAMILY SSF51445 229 621 1.22E-111 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Gene3D G3DSA:2.60.40.10 14 104 1.7E-19 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Gene3D G3DSA:2.60.40.10 113 220 2.3E-41 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Pfam PF00128 Alpha amylase, catalytic domain 273 344 4.1E-8 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS01560 29f8b951d471f35c0aab5d28e401d4d4 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 2.0E-23 T 06-07-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS03610 64caa3c2d5c017f21be49212a5a65449 144 Pfam PF04965 Gene 25-like lysozyme 22 111 6.4E-12 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD LFZ55_RS03610 64caa3c2d5c017f21be49212a5a65449 144 SUPERFAMILY SSF160719 64 118 2.22E-6 T 06-07-2017 LFZ55_RS03610 64caa3c2d5c017f21be49212a5a65449 144 Gene3D G3DSA:3.10.450.40 70 120 1.3E-6 T 06-07-2017 LFZ55_RS03610 64caa3c2d5c017f21be49212a5a65449 144 Hamap MF_02010 Anti-adapter protein IraD [iraD]. 1 126 41.227 T 06-07-2017 IPR023776 Anti-adapter protein, IraD GO:0006974|GO:0043856 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 Pfam PF00953 Glycosyl transferase family 4 99 284 2.5E-34 T 06-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 4.3E-162 T 06-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS19750 aeb346f9d95c7ace1bfda3a81afae538 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.805 T 06-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LFZ55_RS00110 20b826e12546ad5a2ba5f96f9536a5ca 210 Hamap MF_01150 Chaperone protein TorD [torD]. 4 202 30.504 T 06-07-2017 IPR023069 Chaperone TorD LFZ55_RS00110 20b826e12546ad5a2ba5f96f9536a5ca 210 Gene3D G3DSA:1.10.3480.10 9 202 2.3E-32 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS00110 20b826e12546ad5a2ba5f96f9536a5ca 210 SUPERFAMILY SSF89155 10 200 1.83E-40 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS00110 20b826e12546ad5a2ba5f96f9536a5ca 210 Pfam PF02613 Nitrate reductase delta subunit 51 172 2.6E-24 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 06-07-2017 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 9.8E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 SUPERFAMILY SSF47413 12 70 1.03E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 SMART SM00354 12 82 9.4E-29 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 Gene3D G3DSA:1.10.260.40 13 71 7.3E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 Gene3D G3DSA:3.40.50.2300 72 180 9.2E-34 T 06-07-2017 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 Gene3D G3DSA:3.40.50.2300 181 339 8.5E-46 T 06-07-2017 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 Pfam PF13377 Periplasmic binding protein-like domain 180 339 9.0E-31 T 06-07-2017 LFZ55_RS07535 7298f790f8c9f55f964c5b4e954ab26e 339 SUPERFAMILY SSF53822 72 339 3.0E-53 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS04765 58cce4f507e6b597d98733aee31077a5 97 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 1.8E-39 T 06-07-2017 IPR010152 CRISPR-associated protein Cas2 subtype LFZ55_RS04765 58cce4f507e6b597d98733aee31077a5 97 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 2.3E-36 T 06-07-2017 IPR010152 CRISPR-associated protein Cas2 subtype LFZ55_RS07550 f238fd933cd6013594b813583e3a3987 90 SUPERFAMILY SSF52794 1 85 1.44E-21 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS07550 f238fd933cd6013594b813583e3a3987 90 Gene3D G3DSA:3.40.50.270 2 84 1.4E-14 T 06-07-2017 LFZ55_RS07550 f238fd933cd6013594b813583e3a3987 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 3.1E-17 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:1.20.5.170 181 222 2.8E-24 T 06-07-2017 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Pfam PF06506 Propionate catabolism activator 39 202 5.5E-51 T 06-07-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 316 331 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 SUPERFAMILY SSF46689 447 533 8.96E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:3.40.50.2300 6 102 2.8E-46 T 06-07-2017 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:1.10.8.60 403 453 2.8E-16 T 06-07-2017 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:3.40.50.300 223 402 2.3E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 447 456 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 SUPERFAMILY SSF159800 15 197 7.98E-52 T 06-07-2017 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Pfam PF02954 Bacterial regulatory protein, Fis family 502 532 1.7E-11 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Pfam PF00158 Sigma-54 interaction domain 222 396 1.0E-63 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 SUPERFAMILY SSF52540 220 464 6.01E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 SMART SM00382 241 394 2.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:1.10.10.60 454 533 2.5E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 Gene3D G3DSA:3.40.50.10660 103 179 4.3E-36 T 06-07-2017 LFZ55_RS18600 40ff3091451301a89a7dfd5a70ca2acf 541 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 11 533 1.3E-249 T 06-07-2017 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 SUPERFAMILY SSF52172 3 184 3.02E-43 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 Gene3D G3DSA:3.40.50.2300 3 124 1.7E-41 T 06-07-2017 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 Pfam PF00072 Response regulator receiver domain 5 117 7.8E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.6E-28 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 Gene3D G3DSA:1.10.10.10 129 226 1.3E-36 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 SMART SM00448 3 116 1.0E-45 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 SMART SM00862 150 225 2.0E-27 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS18450 b9866a346be486dd564732a665d98a1d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 7.5E-116 T 06-07-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 LFZ55_RS14220 1c233af8816b43fdb7182fed131a9da4 341 Gene3D G3DSA:3.20.20.300 3 330 1.5E-95 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS14220 1c233af8816b43fdb7182fed131a9da4 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 47.813 T 06-07-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LFZ55_RS14220 1c233af8816b43fdb7182fed131a9da4 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 06-07-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LFZ55_RS14220 1c233af8816b43fdb7182fed131a9da4 341 SUPERFAMILY SSF51445 3 313 9.69E-86 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS14220 1c233af8816b43fdb7182fed131a9da4 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 317 1.0E-98 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS00180 0013e2e1f3d04152cb78249662681c04 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 1.2E-20 T 06-07-2017 IPR002068 Alpha crystallin/Hsp20 domain LFZ55_RS00180 0013e2e1f3d04152cb78249662681c04 142 Gene3D G3DSA:2.60.40.790 20 135 1.6E-17 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS00180 0013e2e1f3d04152cb78249662681c04 142 SUPERFAMILY SSF49764 30 135 1.64E-19 T 06-07-2017 IPR008978 HSP20-like chaperone LFZ55_RS00180 0013e2e1f3d04152cb78249662681c04 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 45.099 T 06-07-2017 IPR022848 Small heat shock protein IbpB LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 Gene3D G3DSA:3.40.50.720 84 247 2.1E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 4.0E-46 T 06-07-2017 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 SMART SM00830 9 89 1.4E-28 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 Gene3D G3DSA:1.10.3660.10 248 372 9.0E-57 T 06-07-2017 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 Pfam PF01817 Chorismate mutase type II 9 86 2.7E-19 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 Gene3D G3DSA:1.20.59.10 3 83 5.0E-22 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 SUPERFAMILY SSF48179 241 366 1.36E-41 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 SUPERFAMILY SSF51735 91 238 2.05E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 SUPERFAMILY SSF48600 4 88 6.96E-23 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 PIRSF PIRSF001499 1 373 1.1E-182 T 06-07-2017 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 LFZ55_RS05820 71875ba7c463eb94a0a1ac7dac1d8f5c 373 Pfam PF02153 Prephenate dehydrogenase 138 343 3.5E-28 T 06-07-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 SUPERFAMILY SSF81271 399 465 3.11E-22 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Pfam PF02824 TGS domain 406 465 1.2E-21 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Gene3D G3DSA:3.30.70.260 664 739 9.7E-28 T 06-07-2017 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Pfam PF13291 ACT domain 664 740 1.9E-17 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 SUPERFAMILY SSF109604 26 207 3.45E-45 T 06-07-2017 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Pfam PF13328 HD domain 46 191 2.4E-39 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 SMART SM00954 251 361 8.4E-66 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 SUPERFAMILY SSF81301 196 410 1.54E-63 T 06-07-2017 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.3E-36 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Gene3D G3DSA:3.30.460.10 194 340 7.9E-50 T 06-07-2017 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 SUPERFAMILY SSF55021 665 741 1.98E-13 T 06-07-2017 LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 Gene3D G3DSA:3.10.20.30 406 467 3.4E-26 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS04660 93bd304b04fd6a5754b2dbc243cfb039 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 1.6E-185 T 06-07-2017 IPR004811 RelA/SpoT family GO:0015969 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 SUPERFAMILY SSF46894 827 892 7.14E-17 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 Gene3D G3DSA:1.10.10.10 835 893 3.4E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 2.1E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 39.921 T 06-07-2017 IPR023768 Transcriptional regulator HTH-type, MalT LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 SUPERFAMILY SSF48452 442 803 1.8E-151 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 SMART SM00421 833 890 5.3E-21 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 SUPERFAMILY SSF52540 6 226 2.04E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS01605 d6254449e578bdb6b08d3c3afe1b3de2 901 Gene3D G3DSA:1.25.40.10 446 808 2.4E-103 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS06965 d151d91627aa09ff76d5cce2ee825827 298 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 60 297 41.039 T 06-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 LFZ55_RS06965 d151d91627aa09ff76d5cce2ee825827 298 PIRSF PIRSF018982 49 298 2.9E-102 T 06-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 LFZ55_RS06965 d151d91627aa09ff76d5cce2ee825827 298 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 68 296 2.2E-79 T 06-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 LFZ55_RS17885 7af6753bd830398f5f1628fc4396d6b2 219 Gene3D G3DSA:1.10.3720.10 10 215 5.3E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17885 7af6753bd830398f5f1628fc4396d6b2 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 1.0E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17885 7af6753bd830398f5f1628fc4396d6b2 219 SUPERFAMILY SSF161098 8 206 1.3E-40 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01275 195a2793a9eb0b252a39a5016b6e4598 487 Gene3D G3DSA:3.40.50.10370 383 482 3.5E-26 T 06-07-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LFZ55_RS01275 195a2793a9eb0b252a39a5016b6e4598 487 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 387 466 2.8E-9 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS01275 195a2793a9eb0b252a39a5016b6e4598 487 SUPERFAMILY SSF52794 386 473 8.89E-16 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS01275 195a2793a9eb0b252a39a5016b6e4598 487 Pfam PF02378 Phosphotransferase system, EIIC 24 282 1.4E-10 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 Gene3D G3DSA:3.40.50.300 9 254 3.4E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 SUPERFAMILY SSF50331 250 364 2.55E-7 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 7.8E-166 T 06-07-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 Pfam PF08402 TOBE domain 292 372 1.1E-7 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 Pfam PF00005 ABC transporter 34 174 7.2E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 SMART SM00382 42 225 7.2E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS14140 085fd696e721fa1a63003c0620e96c29 378 SUPERFAMILY SSF52540 18 257 3.69E-87 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11885 8ea3625085993ac779b6ed0e08990e0a 210 Gene3D G3DSA:3.20.20.70 2 201 2.7E-52 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS11885 8ea3625085993ac779b6ed0e08990e0a 210 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 195 1.5E-63 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS11885 8ea3625085993ac779b6ed0e08990e0a 210 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS11885 8ea3625085993ac779b6ed0e08990e0a 210 SUPERFAMILY SSF51366 1 201 4.17E-40 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS11885 8ea3625085993ac779b6ed0e08990e0a 210 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 Pfam PF03958 Bacterial type II/III secretion system short domain 120 180 8.9E-10 T 06-07-2017 IPR005644 NolW-like LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 22 409 1.1E-128 T 06-07-2017 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR01032 Gene IV protein signature 230 253 3.8E-9 T 06-07-2017 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR01032 Gene IV protein signature 271 294 3.8E-9 T 06-07-2017 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR01032 Gene IV protein signature 337 365 3.8E-9 T 06-07-2017 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 Pfam PF00263 Bacterial type II and III secretion system protein 250 409 2.4E-44 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 392 8.7E-12 T 06-07-2017 IPR001775 GspD/PilQ family LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 8.7E-12 T 06-07-2017 IPR001775 GspD/PilQ family LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 411 8.7E-12 T 06-07-2017 IPR001775 GspD/PilQ family LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 355 388 - T 06-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 LFZ55_RS01745 0219db494a80fcceb0273a1800171fd8 412 SMART SM00965 46 94 1.4E-4 T 06-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 Pfam PF00248 Aldo/keto reductase family 18 273 2.2E-52 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.2E-20 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 PRINTS PR00069 Aldo-keto reductase signature 207 231 1.2E-20 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 PRINTS PR00069 Aldo-keto reductase signature 98 116 1.2E-20 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 PRINTS PR00069 Aldo-keto reductase signature 128 145 1.2E-20 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 Gene3D G3DSA:3.20.20.100 14 277 4.5E-78 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS13765 1ae3a3f64952762887cbecf04d9fd409 285 SUPERFAMILY SSF51430 11 274 1.44E-77 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS02045 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 06-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02045 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.0E-64 T 06-07-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02045 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 06-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02045 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 06-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02045 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 54 201 2.5E-59 T 06-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LFZ55_RS22755 66d58bbc5361d272fd2f3e17a62b8232 162 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.755 T 06-07-2017 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd LFZ55_RS22755 66d58bbc5361d272fd2f3e17a62b8232 162 PIRSF PIRSF016548 1 159 6.3E-60 T 06-07-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LFZ55_RS22755 66d58bbc5361d272fd2f3e17a62b8232 162 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 148 6.7E-53 T 06-07-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 Gene3D G3DSA:3.40.50.300 2 255 1.7E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 SUPERFAMILY SSF52540 3 253 3.39E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 Pfam PF00005 ABC transporter 24 181 6.1E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.9E-19 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 SMART SM00382 32 231 4.6E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01050 bdf0f23f52f798147b0480b3bb87be41 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 1.6E-27 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS15315 a2a1063e5d31bb5064cdeb9aa03f1b37 164 Gene3D G3DSA:3.40.630.30 45 144 9.9E-11 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15315 a2a1063e5d31bb5064cdeb9aa03f1b37 164 SUPERFAMILY SSF55729 16 144 5.41E-13 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15315 a2a1063e5d31bb5064cdeb9aa03f1b37 164 Pfam PF00583 Acetyltransferase (GNAT) family 51 139 7.9E-5 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS18630 f086d22f6ebe7391fa0819e943a9ea03 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 219 2.3E-43 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS18630 f086d22f6ebe7391fa0819e943a9ea03 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 2.0E-100 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS18630 f086d22f6ebe7391fa0819e943a9ea03 336 PIRSF PIRSF000267 1 336 3.3E-91 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 3.9E-18 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 1.3E-7 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 Gene3D G3DSA:3.40.50.80 97 248 8.5E-47 T 06-07-2017 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 Gene3D G3DSA:2.40.30.10 2 96 7.1E-32 T 06-07-2017 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 SUPERFAMILY SSF52343 103 248 3.54E-38 T 06-07-2017 LFZ55_RS23105 ff4d4ba127e8f9b54429dbc50763597c 248 SUPERFAMILY SSF63380 3 100 2.51E-25 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 SUPERFAMILY SSF50129 1 176 3.65E-47 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 4.2E-28 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 Gene3D G3DSA:3.90.180.10 1 164 6.5E-59 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 SMART SM00829 7 332 3.9E-7 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 SUPERFAMILY SSF51735 134 302 1.9E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 Gene3D G3DSA:3.40.50.720 165 282 2.9E-31 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12170 bfb24a143e86d8d03123f2d9ba25739e 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.2E-29 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 PIRSF PIRSF039085 1 240 3.6E-110 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 SMART SM00382 26 213 2.2E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 SUPERFAMILY SSF52540 1 235 1.77E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 Pfam PF00005 ABC transporter 17 165 1.6E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16485 6ddd3a7e1bd56b9cb204459a41820907 240 Gene3D G3DSA:3.40.50.300 1 237 6.1E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 SMART SM00062 26 246 1.7E-74 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 SMART SM00079 26 245 9.7E-8 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 Gene3D G3DSA:3.40.190.10 207 246 1.0E-47 T 06-07-2017 LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 Gene3D G3DSA:3.40.190.10 24 102 1.0E-47 T 06-07-2017 LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.6E-70 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 Gene3D G3DSA:3.40.190.10 103 206 1.9E-33 T 06-07-2017 LFZ55_RS16475 6b4eddb6b5c35c40a4c7573dcca5823d 248 SUPERFAMILY SSF53850 2 245 1.22E-74 T 06-07-2017 LFZ55_RS09155 a8b70162be6c6254c6bf2660aa1a6a46 181 SUPERFAMILY SSF52540 2 181 8.4E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09155 a8b70162be6c6254c6bf2660aa1a6a46 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 1.1E-61 T 06-07-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09155 a8b70162be6c6254c6bf2660aa1a6a46 181 PIRSF PIRSF006135 1 181 1.9E-64 T 06-07-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09155 a8b70162be6c6254c6bf2660aa1a6a46 181 Gene3D G3DSA:3.40.50.300 2 181 6.0E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10420 f2f99f713fda867e3e9722d42d141b32 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 3.9E-28 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 LFZ55_RS10420 f2f99f713fda867e3e9722d42d141b32 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 1.0E-20 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 LFZ55_RS10420 f2f99f713fda867e3e9722d42d141b32 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.759 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 SUPERFAMILY SSF51735 4 243 5.86E-87 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 5.3E-102 T 06-07-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 6.8E-6 T 06-07-2017 LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 Gene3D G3DSA:3.40.50.720 1 243 6.6E-89 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.9E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14290 566da2aaeeeda3dd6bbdc1436cf7b44b 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.0E-68 T 06-07-2017 LFZ55_RS00835 cc862d4f79f29cd0b701e32ba9d10954 286 Gene3D G3DSA:3.20.20.150 6 276 1.3E-52 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS00835 cc862d4f79f29cd0b701e32ba9d10954 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 9.1E-156 T 06-07-2017 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 LFZ55_RS00835 cc862d4f79f29cd0b701e32ba9d10954 286 Pfam PF01261 Xylose isomerase-like TIM barrel 25 234 1.5E-36 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS00835 cc862d4f79f29cd0b701e32ba9d10954 286 SUPERFAMILY SSF51658 12 276 7.46E-56 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS07675 522a7f02706696a151a860d1c25f9df8 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.413 T 06-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LFZ55_RS07675 522a7f02706696a151a860d1c25f9df8 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 5.0E-21 T 06-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 Pfam PF00664 ABC transporter transmembrane region 27 297 1.8E-60 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 3.8E-273 T 06-07-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 SUPERFAMILY SSF52540 332 580 5.74E-97 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 Pfam PF00005 ABC transporter 359 509 1.9E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 SMART SM00382 368 541 1.3E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 Gene3D G3DSA:1.20.1560.10 13 325 1.3E-70 T 06-07-2017 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 SUPERFAMILY SSF90123 8 325 4.71E-75 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 Gene3D G3DSA:3.40.50.300 342 574 9.8E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15715 a34fdd5c7f28f172b86f25ee549fc66e 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 Gene3D G3DSA:3.40.50.300 281 487 8.8E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 SMART SM00382 286 477 6.4E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 SMART SM00963 193 273 8.6E-25 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 Pfam PF00448 SRP54-type protein, GTPase domain 287 487 1.1E-79 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 461 474 - T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 SUPERFAMILY SSF52540 280 487 1.23E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 SMART SM00962 287 488 5.0E-126 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 216 488 65.96 T 06-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 216 487 2.6E-116 T 06-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 Gene3D G3DSA:1.20.120.140 179 269 4.9E-36 T 06-07-2017 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 SUPERFAMILY SSF47364 188 267 9.81E-23 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS01405 8731d1b080c0a078b8ec6cf2e128dd83 491 Pfam PF02881 SRP54-type protein, helical bundle domain 204 269 2.4E-14 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.241 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 06-07-2017 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.4E-58 T 06-07-2017 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 SUPERFAMILY SSF52540 6 219 2.02E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 06-07-2017 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 06-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 6.6E-240 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS22835 81eec51fa93afdb25636cd17bb84e127 394 Gene3D G3DSA:3.40.50.300 3 208 6.5E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 SUPERFAMILY SSF52540 98 365 3.12E-90 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 SMART SM00382 163 344 1.0E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 24 437 1.8E-153 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 Gene3D G3DSA:3.40.50.300 127 408 8.7E-91 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 360 4.2E-74 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS18860 bbc54c24c0892e63a0ab9825ddd145d5 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 3.4E-85 T 06-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 SUPERFAMILY SSF55620 4 221 2.74E-76 T 06-07-2017 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 Pfam PF01227 GTP cyclohydrolase I 41 218 1.8E-62 T 06-07-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 Gene3D G3DSA:3.30.1130.10 92 220 4.0E-51 T 06-07-2017 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.681 T 06-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 06-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 06-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 LFZ55_RS08300 cc469b7b60416f7ddf1c7b7dfc6b9759 222 Gene3D G3DSA:1.10.286.10 4 86 5.3E-31 T 06-07-2017 LFZ55_RS07330 eb49b5d825e121ceb7d4377a3566b34a 183 SMART SM00463 95 173 8.7E-23 T 06-07-2017 IPR002625 Smr domain LFZ55_RS07330 eb49b5d825e121ceb7d4377a3566b34a 183 Pfam PF01713 Smr domain 98 172 9.4E-18 T 06-07-2017 IPR002625 Smr domain LFZ55_RS07330 eb49b5d825e121ceb7d4377a3566b34a 183 SUPERFAMILY SSF160443 96 170 2.35E-9 T 06-07-2017 IPR002625 Smr domain LFZ55_RS07330 eb49b5d825e121ceb7d4377a3566b34a 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.317 T 06-07-2017 IPR022990 Uncharacterised protein family UPF0115 LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 Pfam PF00753 Metallo-beta-lactamase superfamily 506 682 2.2E-14 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 Pfam PF13567 Domain of unknown function (DUF4131) 12 157 6.9E-7 T 06-07-2017 IPR025405 Domain of unknown function DUF4131 LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 Gene3D G3DSA:3.60.15.10 474 679 2.1E-28 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 SUPERFAMILY SSF56281 497 742 9.28E-43 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 405 4.8E-48 T 06-07-2017 IPR004477 ComEC/Rec2-related protein LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 66 718 4.3E-264 T 06-07-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 SMART SM00849 508 689 0.0017 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS15720 98ec0ccdc406f3496526a7c42199549b 754 Pfam PF03772 Competence protein 201 469 1.8E-54 T 06-07-2017 IPR004477 ComEC/Rec2-related protein LFZ55_RS07210 5dde8d1847e4da6f267a69ad18852949 415 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 25 401 8.0E-48 T 06-07-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LFZ55_RS07210 5dde8d1847e4da6f267a69ad18852949 415 Pfam PF02378 Phosphotransferase system, EIIC 41 293 3.1E-13 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 Pfam PF00884 Sulfatase 40 390 3.2E-74 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 Gene3D G3DSA:3.30.1120.10 413 425 3.7E-22 T 06-07-2017 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 Gene3D G3DSA:3.30.1120.10 464 529 3.7E-22 T 06-07-2017 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 Gene3D G3DSA:3.40.720.10 38 412 1.3E-97 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 ProSitePatterns PS00149 Sulfatases signature 2. 157 167 - T 06-07-2017 IPR024607 Sulfatase, conserved site LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 SUPERFAMILY SSF53649 38 64 1.15E-106 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS10670 3a911e9e42083e1ea1292c8b9442a367 541 SUPERFAMILY SSF53649 91 526 1.15E-106 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS24140 782e8a25dfa18a9f1f5f02c79c491a5d 445 PIRSF PIRSF005353 5 444 3.3E-177 T 06-07-2017 IPR026033 Purine permease PbuG-like LFZ55_RS24140 782e8a25dfa18a9f1f5f02c79c491a5d 445 Pfam PF00860 Permease family 31 404 8.2E-43 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS15570 3b23e4126bd25a944cfd10c108a14ab0 55 Pfam PF04957 Ribosome modulation factor 1 52 2.3E-30 T 06-07-2017 IPR007040 Ribosome modulation factor LFZ55_RS15570 3b23e4126bd25a944cfd10c108a14ab0 55 Gene3D G3DSA:1.10.10.620 1 51 5.9E-28 T 06-07-2017 IPR023200 Ribosome modulation factor-like domain LFZ55_RS15570 3b23e4126bd25a944cfd10c108a14ab0 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.683 T 06-07-2017 IPR007040 Ribosome modulation factor LFZ55_RS15570 3b23e4126bd25a944cfd10c108a14ab0 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-25 T 06-07-2017 IPR007040 Ribosome modulation factor LFZ55_RS02525 12fa99fa27562f5e93c084af69e28da3 229 Gene3D G3DSA:3.20.20.70 8 226 9.8E-90 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02525 12fa99fa27562f5e93c084af69e28da3 229 SUPERFAMILY SSF51366 14 224 3.45E-54 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS02525 12fa99fa27562f5e93c084af69e28da3 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 37.259 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 LFZ55_RS02525 12fa99fa27562f5e93c084af69e28da3 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 6.9E-87 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 LFZ55_RS12770 f82b43a6ccb496aa74fd0c9eb1317e33 417 SUPERFAMILY SSF103473 23 414 7.59E-63 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12770 f82b43a6ccb496aa74fd0c9eb1317e33 417 Gene3D G3DSA:1.20.1250.20 36 215 1.0E-30 T 06-07-2017 LFZ55_RS12770 f82b43a6ccb496aa74fd0c9eb1317e33 417 Gene3D G3DSA:1.20.1250.20 242 412 3.8E-17 T 06-07-2017 LFZ55_RS12770 f82b43a6ccb496aa74fd0c9eb1317e33 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS12770 f82b43a6ccb496aa74fd0c9eb1317e33 417 Pfam PF07690 Major Facilitator Superfamily 41 261 1.2E-26 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS10545 282fecbb2c48cc7ddaf783c1d611e498 203 SUPERFAMILY SSF53955 37 197 4.74E-27 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS10545 282fecbb2c48cc7ddaf783c1d611e498 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 63.239 T 06-07-2017 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 LFZ55_RS10545 282fecbb2c48cc7ddaf783c1d611e498 203 Pfam PF01464 Transglycosylase SLT domain 43 168 5.5E-28 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS10545 282fecbb2c48cc7ddaf783c1d611e498 203 Gene3D G3DSA:1.10.530.10 34 199 5.2E-31 T 06-07-2017 LFZ55_RS10545 282fecbb2c48cc7ddaf783c1d611e498 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LFZ55_RS12560 bc7b3e98b18879fed8b047a623269ba3 221 Pfam PF01914 MarC family integral membrane protein 5 217 3.3E-69 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LFZ55_RS12560 bc7b3e98b18879fed8b047a623269ba3 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 213 3.9E-36 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.3E-21 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 Pfam PF13377 Periplasmic binding protein-like domain 176 324 3.7E-21 T 06-07-2017 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.2E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.2E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 Gene3D G3DSA:1.10.260.40 2 51 3.4E-25 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 SUPERFAMILY SSF53822 75 325 6.42E-56 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 SUPERFAMILY SSF47413 2 57 2.25E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 SMART SM00354 2 72 4.7E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 Gene3D G3DSA:3.40.50.2300 180 317 1.5E-31 T 06-07-2017 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 Gene3D G3DSA:3.40.50.2300 52 179 1.8E-30 T 06-07-2017 LFZ55_RS11470 f2d20e98eb8e4bac4c5e375b30ec6e2a 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 06-07-2017 LFZ55_RS11260 3a1dab0888889509139b7c334b0b38d1 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 7.6E-38 T 06-07-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LFZ55_RS11260 3a1dab0888889509139b7c334b0b38d1 108 SUPERFAMILY SSF55159 5 104 8.89E-25 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LFZ55_RS11260 3a1dab0888889509139b7c334b0b38d1 108 Gene3D G3DSA:3.30.780.10 28 108 3.2E-34 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LFZ55_RS11260 3a1dab0888889509139b7c334b0b38d1 108 PIRSF PIRSF037511 1 108 5.5E-34 T 06-07-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LFZ55_RS11260 3a1dab0888889509139b7c334b0b38d1 108 Pfam PF01253 Translation initiation factor SUI1 32 101 6.5E-18 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 SMART SM00387 565 678 2.3E-7 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 889 24.578 T 06-07-2017 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Pfam PF16359 RcsD-ABL domain 687 788 4.6E-41 T 06-07-2017 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 SUPERFAMILY SSF55874 511 680 1.74E-14 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 SUPERFAMILY SSF47226 803 888 2.22E-21 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 675 1.1E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Gene3D G3DSA:3.30.565.10 523 678 3.9E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Gene3D G3DSA:1.20.120.160 775 888 8.1E-35 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS07880 306ba123c0b9c338f327f149efe83d6e 889 Pfam PF01627 Hpt domain 810 869 2.4E-10 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 Gene3D G3DSA:3.40.190.10 101 205 2.1E-7 T 06-07-2017 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 Gene3D G3DSA:3.40.190.10 206 264 1.2E-6 T 06-07-2017 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 Pfam PF03466 LysR substrate binding domain 102 296 1.1E-24 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 SUPERFAMILY SSF46785 12 94 1.33E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 Gene3D G3DSA:1.10.10.10 12 93 4.6E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 3.9E-13 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20685 7ca974f3f3821ff1d2e85c0e9ed5d8ab 302 SUPERFAMILY SSF53850 102 299 2.53E-23 T 06-07-2017 LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 Gene3D G3DSA:3.40.50.300 2 212 4.5E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 Pfam PF13500 AAA domain 4 207 1.1E-29 T 06-07-2017 LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 SUPERFAMILY SSF52540 1 212 1.59E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 PIRSF PIRSF006755 1 224 2.8E-62 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.881 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS12750 7d905d49e6f70ece6ec0c620560b48c4 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.6E-39 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 LFZ55_RS05090 5dfd3476722a0ae5354cce014f623194 282 Pfam PF00950 ABC 3 transport family 11 266 4.5E-79 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 LFZ55_RS05090 5dfd3476722a0ae5354cce014f623194 282 SUPERFAMILY SSF81345 4 262 3.66E-38 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS05090 5dfd3476722a0ae5354cce014f623194 282 Gene3D G3DSA:1.10.3470.10 55 274 2.6E-9 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS10035 5b5fe9235d164c69150040f6f5862a57 117 Pfam PF13995 YebF-like protein 27 115 2.1E-41 T 06-07-2017 IPR025603 YebF/Colicin-M immunity protein LFZ55_RS10035 5b5fe9235d164c69150040f6f5862a57 117 Hamap MF_01435 Protein YebF [yebF]. 1 117 35.61 T 06-07-2017 IPR020236 Uncharacterised protein family YebF LFZ55_RS10035 5b5fe9235d164c69150040f6f5862a57 117 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 24 117 3.0E-48 T 06-07-2017 IPR025603 YebF/Colicin-M immunity protein LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 06-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 06-07-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 06-07-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 06-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LFZ55_RS24065 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 06-07-2017 LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 SUPERFAMILY SSF52540 122 348 1.19E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 Gene3D G3DSA:3.40.50.300 123 283 1.1E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 Gene3D G3DSA:1.10.40.50 284 353 2.7E-26 T 06-07-2017 LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 48 348 37.455 T 06-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 342 5.7E-99 T 06-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LFZ55_RS21785 1165b4c3110d288370c8143f49f8aecd 358 Pfam PF03193 Protein of unknown function, DUF258 108 284 1.3E-55 T 06-07-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 LFZ55_RS22005 82d019ec1f57a030d2e0a691ece497d6 284 Pfam PF13276 HTH-like domain 43 96 8.5E-13 T 06-07-2017 IPR025948 HTH-like domain LFZ55_RS22005 82d019ec1f57a030d2e0a691ece497d6 284 Gene3D G3DSA:3.30.420.10 117 276 9.2E-38 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS22005 82d019ec1f57a030d2e0a691ece497d6 284 Pfam PF00665 Integrase core domain 124 237 2.4E-31 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS22005 82d019ec1f57a030d2e0a691ece497d6 284 SUPERFAMILY SSF53098 116 280 2.28E-41 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 Gene3D G3DSA:3.40.50.300 6 252 1.6E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 SMART SM00382 30 229 1.1E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 Pfam PF00005 ABC transporter 21 181 1.5E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 PIRSF PIRSF039085 2 257 8.7E-122 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LFZ55_RS07505 76f723b37d2aa820cb68628c7ca7ad5e 257 SUPERFAMILY SSF52540 6 251 6.53E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16310 af67c3225a07c603daa711bc562cec40 403 Pfam PF07690 Major Facilitator Superfamily 223 385 1.3E-15 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS16310 af67c3225a07c603daa711bc562cec40 403 Gene3D G3DSA:1.20.1250.20 11 197 4.9E-12 T 06-07-2017 LFZ55_RS16310 af67c3225a07c603daa711bc562cec40 403 Gene3D G3DSA:1.20.1250.20 214 387 1.7E-22 T 06-07-2017 LFZ55_RS16310 af67c3225a07c603daa711bc562cec40 403 SUPERFAMILY SSF103473 11 389 9.42E-44 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 Pfam PF07690 Major Facilitator Superfamily 11 177 1.2E-13 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 Pfam PF07690 Major Facilitator Superfamily 210 371 6.6E-12 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 42.6 T 06-07-2017 IPR023745 MSF-type transporter, YcaD LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 SUPERFAMILY SSF103473 6 375 8.63E-44 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 Gene3D G3DSA:1.20.1250.20 208 370 3.4E-16 T 06-07-2017 LFZ55_RS15790 ba14f33e404425c1a6ead8b17b3f6ab3 382 Gene3D G3DSA:1.20.1250.20 6 182 7.8E-20 T 06-07-2017 LFZ55_RS17455 399816808d2d6adaed33405d944bb153 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 86 5.4E-29 T 06-07-2017 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein LFZ55_RS17455 399816808d2d6adaed33405d944bb153 98 PIRSF PIRSF002736 1 97 4.2E-39 T 06-07-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 LFZ55_RS17455 399816808d2d6adaed33405d944bb153 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 2.0E-35 T 06-07-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 LFZ55_RS17455 399816808d2d6adaed33405d944bb153 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 4.5E-30 T 06-07-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 LFZ55_RS17455 399816808d2d6adaed33405d944bb153 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.533 T 06-07-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 LFZ55_RS01310 92cf804f752668e1b7ec664b7c4e3139 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.504 T 06-07-2017 IPR019598 Universal stress protein B LFZ55_RS01310 92cf804f752668e1b7ec664b7c4e3139 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 2.8E-54 T 06-07-2017 IPR019598 Universal stress protein B LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 Gene3D G3DSA:2.40.170.20 169 727 8.4E-111 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 Pfam PF00593 TonB dependent receptor 457 725 1.4E-35 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 SUPERFAMILY SSF56935 34 727 1.41E-133 T 06-07-2017 LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 727 7.0E-84 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 710 727 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 165 7.2E-30 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS05540 9715d4423de4c643fa78e53dfb5f28e7 727 Gene3D G3DSA:2.170.130.10 51 168 6.8E-39 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS02605 279fc93500246e863e3d95035e4c7c92 284 PIRSF PIRSF005052 1 284 2.3E-114 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 LFZ55_RS02605 279fc93500246e863e3d95035e4c7c92 284 SUPERFAMILY SSF52540 2 151 4.9E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02605 279fc93500246e863e3d95035e4c7c92 284 Pfam PF03668 P-loop ATPase protein family 1 282 3.0E-147 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 LFZ55_RS02605 279fc93500246e863e3d95035e4c7c92 284 Gene3D G3DSA:3.40.50.300 2 150 8.2E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02605 279fc93500246e863e3d95035e4c7c92 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.024 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 3.6E-99 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 2.2E-101 T 06-07-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.7E-68 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 SUPERFAMILY SSF53613 7 290 2.81E-70 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 PIRSF PIRSF000535 2 311 2.6E-118 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 Gene3D G3DSA:3.40.1190.20 37 309 2.7E-86 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08230 caec162f1a6ad769318d4817357abb00 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS16950 92937c577db2f6abc518d1cb5f0d6fae 348 Pfam PF05145 Putative ammonia monooxygenase 30 339 2.2E-96 T 06-07-2017 IPR007820 AbrB family GO:0010468|GO:0016021 LFZ55_RS16950 92937c577db2f6abc518d1cb5f0d6fae 348 PIRSF PIRSF038991 1 347 4.8E-91 T 06-07-2017 IPR007820 AbrB family GO:0010468|GO:0016021 LFZ55_RS16950 92937c577db2f6abc518d1cb5f0d6fae 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 339 1.2E-43 T 06-07-2017 IPR017516 AbrB duplication LFZ55_RS16950 92937c577db2f6abc518d1cb5f0d6fae 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 161 1.6E-41 T 06-07-2017 IPR017516 AbrB duplication LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 PIRSF PIRSF000727 12 810 6.1E-296 T 06-07-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Pfam PF00696 Amino acid kinase family 12 284 2.5E-43 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 2.6E-25 T 06-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Gene3D G3DSA:3.30.360.10 629 786 1.9E-51 T 06-07-2017 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 SUPERFAMILY SSF53633 12 299 5.11E-57 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 SUPERFAMILY SSF51735 457 630 4.78E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 06-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Gene3D G3DSA:3.40.1160.10 12 59 2.3E-47 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Gene3D G3DSA:3.40.1160.10 114 298 2.3E-47 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Gene3D G3DSA:3.40.50.720 457 628 6.2E-54 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 6.7E-63 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 Pfam PF00742 Homoserine dehydrogenase 608 803 4.4E-44 T 06-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 LFZ55_RS23020 bd15e93f0f4ec3f0179df2e1c2330ec2 810 SUPERFAMILY SSF55347 608 791 7.85E-47 T 06-07-2017 LFZ55_RS15405 aee0bad8569abe7c26bf2aded586b63d 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 7.4E-55 T 06-07-2017 IPR026325 Protein of unknown function DUF932 LFZ55_RS00070 3dff9804b71752a6e652c2fc4e154900 205 SUPERFAMILY SSF51569 2 204 6.78E-58 T 06-07-2017 LFZ55_RS00070 3dff9804b71752a6e652c2fc4e154900 205 Gene3D G3DSA:3.20.20.70 2 202 1.7E-68 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00070 3dff9804b71752a6e652c2fc4e154900 205 Pfam PF01081 KDPG and KHG aldolase 6 183 6.0E-30 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS23600 b1fbe394023dddbb50140de0f335fac9 253 Pfam PF01048 Phosphorylase superfamily 21 245 6.3E-39 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS23600 b1fbe394023dddbb50140de0f335fac9 253 Gene3D G3DSA:3.40.50.1580 5 252 6.4E-83 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS23600 b1fbe394023dddbb50140de0f335fac9 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 3.5E-130 T 06-07-2017 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3 LFZ55_RS23600 b1fbe394023dddbb50140de0f335fac9 253 SUPERFAMILY SSF53167 6 250 2.09E-72 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS23600 b1fbe394023dddbb50140de0f335fac9 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 06-07-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Pfam PF00301 Rubredoxin 425 471 2.9E-20 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 PRINTS PR00163 Rubredoxin signature 425 441 7.3E-7 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 PRINTS PR00163 Rubredoxin signature 455 471 7.3E-7 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 SUPERFAMILY SSF57802 425 475 3.53E-18 T 06-07-2017 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 173 2.8E-11 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 SUPERFAMILY SSF56281 8 285 5.63E-53 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 PIRSF PIRSF005243 1 399 4.8E-161 T 06-07-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Gene3D G3DSA:3.40.50.360 249 394 3.8E-50 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Gene3D G3DSA:2.20.28.10 425 472 9.5E-21 T 06-07-2017 IPR004039 Rubredoxin-type fold LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 SUPERFAMILY SSF52218 251 396 3.71E-34 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 475 96.646 T 06-07-2017 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 SMART SM00849 34 210 1.3E-29 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Gene3D G3DSA:3.60.15.10 5 246 1.3E-90 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS05205 c29859fcd99f25467e1c0aea47886d68 479 Pfam PF00258 Flavodoxin 256 388 5.5E-12 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS24445 61ce86a8524b6f1f41fc7f5000964ad6 96 Gene3D G3DSA:1.10.260.40 36 88 4.2E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS24445 61ce86a8524b6f1f41fc7f5000964ad6 96 SMART SM00530 36 90 2.2E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS24445 61ce86a8524b6f1f41fc7f5000964ad6 96 SUPERFAMILY SSF47413 37 85 1.79E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS24445 61ce86a8524b6f1f41fc7f5000964ad6 96 Pfam PF01381 Helix-turn-helix 37 81 1.3E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 SMART SM00244 18 227 4.6E-45 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 PIRSF PIRSF005651 1 334 7.5E-110 T 06-07-2017 IPR010200 HflC GO:0016021|GO:0052547 LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 1.3E-148 T 06-07-2017 IPR010200 HflC GO:0016021|GO:0052547 LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 SUPERFAMILY SSF117892 196 233 1.31E-7 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 SUPERFAMILY SSF117892 56 157 1.57E-16 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS21710 c7c50431a97c0b63c85f4e2d6f0b61f5 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 3.6E-34 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 Pfam PF09397 Ftsk gamma domain 1249 1309 1.3E-27 T 06-07-2017 IPR018541 FtsK gamma domain LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 SUPERFAMILY SSF46785 1247 1311 2.99E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 SUPERFAMILY SSF52540 907 1219 5.58E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 SMART SM00843 1247 1312 8.4E-41 T 06-07-2017 IPR018541 FtsK gamma domain LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 Gene3D G3DSA:3.40.50.300 907 1213 7.3E-98 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.1E-40 T 06-07-2017 IPR025199 DNA translocase FtsK, 4TM region LFZ55_RS15835 b4206a7b43541ca70d225782ec987da9 1314 Pfam PF01580 FtsK/SpoIIIE family 933 1146 1.0E-74 T 06-07-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 SUPERFAMILY SSF46785 4 108 9.54E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 Pfam PF03466 LysR substrate binding domain 90 290 1.1E-39 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 Gene3D G3DSA:1.10.10.10 3 82 1.4E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 Gene3D G3DSA:3.40.190.10 92 173 5.4E-8 T 06-07-2017 LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 SUPERFAMILY SSF53850 90 292 1.12E-39 T 06-07-2017 LFZ55_RS02420 94d6af8a50bcea3ebb642981c4914b5b 309 Gene3D G3DSA:3.40.190.10 174 259 5.2E-17 T 06-07-2017 LFZ55_RS04390 cd4dededee46968e6d0f7f4c78a19465 72 Gene3D G3DSA:2.30.30.100 19 72 8.7E-32 T 06-07-2017 LFZ55_RS04390 cd4dededee46968e6d0f7f4c78a19465 72 SUPERFAMILY SSF50182 21 71 3.11E-19 T 06-07-2017 IPR010920 LSM domain LFZ55_RS04390 cd4dededee46968e6d0f7f4c78a19465 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 2.1E-25 T 06-07-2017 IPR010305 Protein of unknown function DUF903 LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 Pfam PF02358 Trehalose-phosphatase 18 222 2.7E-54 T 06-07-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 SUPERFAMILY SSF56784 18 243 2.89E-40 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 214 1.3E-22 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 14 243 1.0E-71 T 06-07-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 Gene3D G3DSA:3.40.50.1000 16 90 1.1E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09785 b8983eec74fe2d1cd70ea517a1f3bc3c 267 Gene3D G3DSA:3.40.50.1000 165 253 1.1E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 Pfam PF03466 LysR substrate binding domain 89 285 8.8E-20 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 Gene3D G3DSA:3.40.190.10 81 191 6.8E-10 T 06-07-2017 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 Gene3D G3DSA:3.40.190.10 192 252 8.8E-5 T 06-07-2017 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 SUPERFAMILY SSF53850 92 286 4.03E-25 T 06-07-2017 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 Gene3D G3DSA:1.10.10.10 4 80 2.4E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 SUPERFAMILY SSF46785 6 87 1.51E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.3E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04315 e0548e3215ed0fbeea84c00610dbd86e 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 SUPERFAMILY SSF49863 915 1036 1.02E-35 T 06-07-2017 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Gene3D G3DSA:2.60.120.410 41 243 3.6E-73 T 06-07-2017 IPR015176 Lyase, N-terminal LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Gene3D G3DSA:2.70.98.10 635 907 2.1E-79 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Gene3D G3DSA:1.50.10.100 248 633 3.1E-125 T 06-07-2017 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Gene3D G3DSA:2.60.220.10 915 1035 1.4E-38 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 PIRSF PIRSF034515 6 1037 0.0 T 06-07-2017 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Pfam PF09092 Lyase, N terminal 47 242 1.4E-56 T 06-07-2017 IPR015176 Lyase, N-terminal LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 641 893 4.8E-30 T 06-07-2017 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 Pfam PF09093 Lyase, catalytic 257 619 2.3E-124 T 06-07-2017 IPR015177 Lyase, catalytic LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 SUPERFAMILY SSF74650 635 909 1.05E-80 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 SUPERFAMILY SSF49785 34 244 5.02E-72 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS17770 69782c7e1691ae0ed26342a9a823b347 1037 SUPERFAMILY SSF48230 247 633 1.42E-142 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 SUPERFAMILY SSF52833 1 83 4.39E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 Pfam PF00462 Glutaredoxin 4 63 1.7E-24 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 PRINTS PR00160 Glutaredoxin signature 4 22 9.7E-18 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 PRINTS PR00160 Glutaredoxin signature 46 59 9.7E-18 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 PRINTS PR00160 Glutaredoxin signature 60 73 9.7E-18 T 06-07-2017 IPR014025 Glutaredoxin subgroup LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 06-07-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 3.5E-37 T 06-07-2017 IPR011900 Glutaredoxin, GrxC GO:0045454 LFZ55_RS00735 cf2a0851a3a459404919e6077037c38c 83 Gene3D G3DSA:3.40.30.10 1 73 9.9E-31 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 SUPERFAMILY SSF52540 480 643 2.25E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 SUPERFAMILY SSF52540 273 337 2.25E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Gene3D G3DSA:3.40.50.300 484 627 1.5E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 SMART SM00490 517 601 3.9E-18 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 72.568 T 06-07-2017 IPR023949 RNA polymerase-associated protein RapA GO:0006355 LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Pfam PF00271 Helicase conserved C-terminal domain 493 601 3.3E-15 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 SUPERFAMILY SSF52540 122 376 5.82E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 SMART SM00487 150 342 1.6E-22 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 7.2E-19 T 06-07-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Gene3D G3DSA:3.40.50.300 154 320 1.2E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19915 9c14b193c7f814a3f2f2bb093ecc60ef 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 8.6E-157 T 06-07-2017 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 2.0E-54 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 21 669 8.2E-277 T 06-07-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 PIRSF PIRSF005419 7 675 2.3E-200 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 06-07-2017 IPR025505 FHIPEP conserved site LFZ55_RS13155 0b6df5e0a6ba1e891fb09302594e36c4 681 Pfam PF00771 FHIPEP family 34 660 1.1E-198 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 Gene3D G3DSA:1.10.287.1080 21 73 6.4E-7 T 06-07-2017 LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 Gene3D G3DSA:1.10.287.1080 131 221 1.3E-12 T 06-07-2017 LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 SUPERFAMILY SSF101386 135 236 6.35E-23 T 06-07-2017 LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 2.0E-27 T 06-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 3.0E-6 T 06-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 SUPERFAMILY SSF101386 2 106 1.39E-26 T 06-07-2017 LFZ55_RS04665 bae0101543071a2f45c1aa748af00c88 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 1.3E-122 T 06-07-2017 IPR011551 NTP pyrophosphohydrolase MazG LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 251 3.4E-26 T 06-07-2017 IPR017703 YgfZ/GcvT conserved site LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 Gene3D G3DSA:3.30.70.1400 27 112 8.3E-32 T 06-07-2017 LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 48.259 T 06-07-2017 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 SUPERFAMILY SSF101790 244 325 1.83E-25 T 06-07-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 SUPERFAMILY SSF103025 13 242 8.95E-64 T 06-07-2017 LFZ55_RS04120 34fc91c964237375af180c43eb8c45d1 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 1.0E-7 T 06-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 2.7E-79 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 9.1E-62 T 06-07-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 5.9E-41 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 Gene3D G3DSA:3.90.110.10 171 448 2.4E-83 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 SUPERFAMILY SSF56327 172 449 2.23E-72 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 Gene3D G3DSA:3.40.50.720 3 168 4.2E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 SUPERFAMILY SSF51735 5 171 4.79E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22105 d8686a0854321f4bd41db11bcc01cdbd 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 06-07-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 Gene3D G3DSA:3.40.190.10 116 213 2.2E-31 T 06-07-2017 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.8E-60 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 SMART SM00062 27 256 1.9E-77 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 Gene3D G3DSA:3.40.190.10 26 113 7.0E-44 T 06-07-2017 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 Gene3D G3DSA:3.40.190.10 215 257 7.0E-44 T 06-07-2017 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 SUPERFAMILY SSF53850 1 256 2.72E-65 T 06-07-2017 LFZ55_RS07485 5787a356c338ad6d6fae77f79fa60007 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 2.1E-99 T 06-07-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LFZ55_RS15230 378428ab739593cf10bedad197d41228 364 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 24 306 4.9E-68 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS15230 378428ab739593cf10bedad197d41228 364 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 24 314 8.6E-62 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 SUPERFAMILY SSF81273 91 133 2.28E-11 T 06-07-2017 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 Gene3D G3DSA:4.10.430.10 90 133 7.5E-26 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 SUPERFAMILY SSF81273 4 58 5.49E-17 T 06-07-2017 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 PIRSF PIRSF002096 1 133 2.0E-53 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 SMART SM00528 86 133 2.2E-25 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 Gene3D G3DSA:1.10.287.1050 1 58 2.0E-20 T 06-07-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 LFZ55_RS05425 dfd8d2c4b005eefe5b6ca43c86c19c97 133 Pfam PF00816 H-NS histone family 38 127 8.5E-21 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 Pfam PF00106 short chain dehydrogenase 2 187 1.1E-54 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 9.5E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 9.5E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 9.5E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 SUPERFAMILY SSF51735 2 231 4.01E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 Gene3D G3DSA:3.40.50.720 2 232 7.6E-65 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.4E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.4E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.4E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.4E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.4E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS12630 20cf1a7415077c5ffc821a89f35c2c62 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 2.3E-99 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 SUPERFAMILY SSF52279 395 464 1.57E-59 T 06-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 SUPERFAMILY SSF52279 495 651 1.57E-59 T 06-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 Gene3D G3DSA:3.40.50.1700 383 651 5.3E-82 T 06-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 7.3E-22 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 7.3E-22 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 7.3E-22 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 7.3E-22 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 7.3E-22 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 06-07-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 SMART SM01217 685 754 3.0E-29 T 06-07-2017 IPR026891 Fibronectin type III-like domain LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 Pfam PF14310 Fibronectin type III-like domain 686 753 1.2E-20 T 06-07-2017 IPR026891 Fibronectin type III-like domain LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 SUPERFAMILY SSF51445 34 394 2.32E-99 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 6.7E-62 T 06-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LFZ55_RS08440 6f0dabc596e3365f54703e2538b4e6c3 765 Gene3D G3DSA:3.20.20.300 35 366 5.4E-104 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 25 258 1.4E-107 T 06-07-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 Gene3D G3DSA:3.80.30.10 88 265 2.9E-71 T 06-07-2017 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 Pfam PF13353 4Fe-4S single cluster domain 35 153 9.1E-18 T 06-07-2017 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 PIRSF PIRSF004869 6 265 2.3E-29 T 06-07-2017 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 Pfam PF04055 Radical SAM superfamily 43 197 3.1E-31 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 SUPERFAMILY SSF102114 42 235 5.1E-24 T 06-07-2017 LFZ55_RS15780 2406873e258740f902612474b5c0c8cf 265 ProSitePatterns PS01087 Radical activating enzymes signature. 37 58 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LFZ55_RS08580 1a380ff2884fd26df554137fbf4e7a96 138 Gene3D G3DSA:1.10.287.390 1 43 9.8E-30 T 06-07-2017 LFZ55_RS08580 1a380ff2884fd26df554137fbf4e7a96 138 SUPERFAMILY SSF69635 1 131 1.48E-30 T 06-07-2017 LFZ55_RS08580 1a380ff2884fd26df554137fbf4e7a96 138 Gene3D G3DSA:3.30.1460.10 44 138 1.2E-57 T 06-07-2017 LFZ55_RS08580 1a380ff2884fd26df554137fbf4e7a96 138 Pfam PF05932 Tir chaperone protein (CesT) family 7 122 3.4E-25 T 06-07-2017 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 LFZ55_RS11985 5bcd32ff8d75e7e72c969443810ba640 38 Pfam PF01527 Transposase 2 38 1.8E-9 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS11985 5bcd32ff8d75e7e72c969443810ba640 38 SUPERFAMILY SSF46689 1 38 2.51E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11985 5bcd32ff8d75e7e72c969443810ba640 38 Gene3D G3DSA:1.10.10.60 3 37 3.2E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 5.7E-25 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.457 T 06-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 Gene3D G3DSA:3.40.5.10 1 52 1.6E-25 T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 Gene3D G3DSA:3.10.430.100 61 149 3.6E-28 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 SUPERFAMILY SSF55658 1 57 3.14E-19 T 06-07-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 SUPERFAMILY SSF55653 60 149 3.92E-25 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.5E-22 T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS21570 7a3a51bf083b31b0d1f3f1832ebaf371 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.2E-58 T 06-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 SUPERFAMILY SSF51419 1 227 4.06E-79 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 2.7E-100 T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 5.2E-30 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 Gene3D G3DSA:3.20.20.10 1 233 1.8E-92 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS03825 65313d3a002544b6339ed97946a6bd52 234 PIRSF PIRSF004848 1 234 4.4E-74 T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 LFZ55_RS21970 793995d75bf32138ba252db32ee06c9c 163 ProDom PD016515 MINOR FIMBRIAL SUBUNIT PLASMID FIMBRIA K88 CSHD LDAF FAEF CLPF 1 158 3.0E-46 T 06-07-2017 LFZ55_RS04785 8ce19a103b8729dc6b09e032ae3587d9 201 Pfam PF01583 Adenylylsulphate kinase 27 179 1.4E-71 T 06-07-2017 LFZ55_RS04785 8ce19a103b8729dc6b09e032ae3587d9 201 SUPERFAMILY SSF52540 23 196 1.73E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04785 8ce19a103b8729dc6b09e032ae3587d9 201 Gene3D G3DSA:3.40.50.300 6 200 1.8E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04785 8ce19a103b8729dc6b09e032ae3587d9 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 6.4E-86 T 06-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 LFZ55_RS04785 8ce19a103b8729dc6b09e032ae3587d9 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.479 T 06-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 LFZ55_RS19505 c41c87419ed4ef2c40ca78ae9d9f6937 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.3E-73 T 06-07-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 LFZ55_RS19505 c41c87419ed4ef2c40ca78ae9d9f6937 178 SUPERFAMILY SSF53271 3 174 5.9E-54 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS19505 c41c87419ed4ef2c40ca78ae9d9f6937 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 1.8E-24 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS19505 c41c87419ed4ef2c40ca78ae9d9f6937 178 Gene3D G3DSA:3.40.50.2020 2 173 1.0E-78 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 SUPERFAMILY SSF53850 92 289 9.31E-25 T 06-07-2017 LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 Gene3D G3DSA:3.40.190.10 123 229 5.4E-7 T 06-07-2017 LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 SUPERFAMILY SSF46785 1 87 7.55E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 Gene3D G3DSA:1.10.10.10 5 85 1.0E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20125 25ddc5960857d519db7890d9a2f16e51 301 Pfam PF03466 LysR substrate binding domain 99 287 1.8E-9 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS14345 625cbf88116d4632ebd14892b738c7f4 317 Gene3D G3DSA:1.20.1330.10 217 258 2.3E-18 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS14345 625cbf88116d4632ebd14892b738c7f4 317 Gene3D G3DSA:1.20.1330.10 69 174 2.3E-18 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS14345 625cbf88116d4632ebd14892b738c7f4 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 191 4.8E-69 T 06-07-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 LFZ55_RS14345 625cbf88116d4632ebd14892b738c7f4 317 SUPERFAMILY SSF64518 1 315 6.41E-62 T 06-07-2017 LFZ55_RS14345 625cbf88116d4632ebd14892b738c7f4 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 4.6E-34 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 SUPERFAMILY SSF52540 4 253 1.13E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 Pfam PF00005 ABC transporter 21 181 2.5E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 5.6E-11 T 06-07-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 SMART SM00382 30 230 2.9E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 Gene3D G3DSA:3.40.50.300 2 251 5.8E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01450 f4af358a17b77dd86ecb5daf691b003b 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 06-07-2017 IPR000808 Mrp, conserved site GO:0005524 LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 Gene3D G3DSA:3.40.50.300 97 349 6.4E-105 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 SUPERFAMILY SSF117916 15 87 1.24E-5 T 06-07-2017 LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 SUPERFAMILY SSF52540 108 355 1.18E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 7.8E-101 T 06-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein LFZ55_RS08500 5e6d07c12e774c3f473ecac6235461b3 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.635 T 06-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 2.6E-22 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 2.6E-22 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 2.6E-22 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 2.6E-22 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 2.6E-22 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 Pfam PF01555 DNA methylase 21 124 3.8E-11 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 Pfam PF01555 DNA methylase 141 199 4.2E-21 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 Gene3D G3DSA:3.40.50.150 3 213 5.1E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24995 9fb2856f0cb730c1f6f349d44d0f669f 226 SUPERFAMILY SSF53335 3 207 3.71E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 SUPERFAMILY SSF48557 10 454 2.51E-106 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 Pfam PF00206 Lyase 14 312 8.5E-82 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 Gene3D G3DSA:1.20.200.10 120 389 1.5E-89 T 06-07-2017 LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.1E-156 T 06-07-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.6E-52 T 06-07-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 Gene3D G3DSA:1.10.275.10 1 119 4.1E-49 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal LFZ55_RS14110 9c75c53df273c2b2f54b8fca43b42a89 456 Gene3D G3DSA:1.10.40.30 390 445 3.3E-34 T 06-07-2017 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 Gene3D G3DSA:3.40.190.10 125 216 2.1E-11 T 06-07-2017 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 249 4.2E-92 T 06-07-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 SUPERFAMILY SSF53850 49 240 1.25E-43 T 06-07-2017 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 Gene3D G3DSA:3.40.190.10 50 124 2.7E-4 T 06-07-2017 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 3 286 1.3E-111 T 06-07-2017 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 LFZ55_RS22170 8fce1804b785b9dbd1e37b3f291b9a87 333 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 272 2.5E-70 T 06-07-2017 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 1.3E-152 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 Gene3D G3DSA:3.40.640.10 17 259 1.2E-101 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.782 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 Pfam PF00266 Aminotransferase class-V 4 350 2.3E-69 T 06-07-2017 IPR000192 Aminotransferase class V domain LFZ55_RS15745 76102c78a359321673229e4483db2075 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LFZ55_RS15745 76102c78a359321673229e4483db2075 362 Gene3D G3DSA:3.90.1150.10 260 361 9.0E-43 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 PIRSF PIRSF000525 1 362 9.1E-146 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 LFZ55_RS15745 76102c78a359321673229e4483db2075 362 SUPERFAMILY SSF53383 4 362 4.53E-114 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 Gene3D G3DSA:3.20.20.450 496 736 1.6E-71 T 06-07-2017 IPR001633 EAL domain LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 SMART SM00052 492 735 2.8E-98 T 06-07-2017 IPR001633 EAL domain LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 SMART SM00267 319 487 5.6E-8 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 Pfam PF00563 EAL domain 498 730 4.3E-66 T 06-07-2017 IPR001633 EAL domain LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 SUPERFAMILY SSF141868 497 735 1.44E-69 T 06-07-2017 IPR001633 EAL domain LFZ55_RS06710 5f87b8f611decbf9428be046eb8ccd61 737 Pfam PF05231 MASE1 15 320 1.7E-66 T 06-07-2017 IPR007895 MASE1 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.1E-24 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 06-07-2017 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 06-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 SMART SM00649 9 141 4.6E-84 T 06-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.2E-65 T 06-07-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 06-07-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:3.30.1550.10 2 72 9.8E-38 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal LFZ55_RS22820 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-30 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS19195 5e267f8e96f6445005502fce20749859 181 PIRSF PIRSF011484 1 180 4.3E-65 T 06-07-2017 IPR009822 YaeQ LFZ55_RS19195 5e267f8e96f6445005502fce20749859 181 Gene3D G3DSA:3.10.640.10 1 179 4.6E-81 T 06-07-2017 LFZ55_RS19195 5e267f8e96f6445005502fce20749859 181 SUPERFAMILY SSF52980 4 178 4.02E-69 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS19195 5e267f8e96f6445005502fce20749859 181 Pfam PF07152 YaeQ protein 1 173 3.5E-71 T 06-07-2017 IPR009822 YaeQ LFZ55_RS19195 5e267f8e96f6445005502fce20749859 181 SMART SM01322 1 176 1.3E-110 T 06-07-2017 IPR009822 YaeQ LFZ55_RS06850 0b579745ed5967d2c1573bb2751661a0 432 Gene3D G3DSA:3.40.710.10 28 402 1.2E-84 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS06850 0b579745ed5967d2c1573bb2751661a0 432 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 432 72.623 T 06-07-2017 IPR022849 Peptidase S12, UPF0214, YfeW-type LFZ55_RS06850 0b579745ed5967d2c1573bb2751661a0 432 Pfam PF00144 Beta-lactamase 45 410 6.1E-64 T 06-07-2017 IPR001466 Beta-lactamase-related LFZ55_RS06850 0b579745ed5967d2c1573bb2751661a0 432 SUPERFAMILY SSF56601 37 401 3.65E-75 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 Pfam PF00557 Metallopeptidase family M24 181 411 5.0E-67 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 SUPERFAMILY SSF53092 1 174 1.31E-53 T 06-07-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 1.1E-5 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.1E-5 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 Gene3D G3DSA:3.40.350.10 2 178 4.2E-56 T 06-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 06-07-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 SUPERFAMILY SSF55920 175 433 8.37E-89 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 5.4E-36 T 06-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 Gene3D G3DSA:3.90.230.10 179 433 4.7E-90 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS04075 6f282222ae830e558a1685b292dafbf8 438 SMART SM01011 1 136 7.9E-59 T 06-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 1.4E-156 T 06-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 SUPERFAMILY SSF53633 6 256 9.69E-65 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.6E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.6E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.6E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.6E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.6E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 SMART SM00359 276 359 3.6E-22 T 06-07-2017 IPR002478 PUA domain GO:0003723 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 Pfam PF00696 Amino acid kinase family 6 235 3.7E-44 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 SUPERFAMILY SSF88697 276 365 2.49E-23 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 35.9 T 06-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 Gene3D G3DSA:3.40.1160.10 3 261 3.0E-59 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 Pfam PF01472 PUA domain 276 350 6.6E-22 T 06-07-2017 IPR002478 PUA domain GO:0003723 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 Gene3D G3DSA:2.30.130.10 273 365 1.1E-25 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 06-07-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18995 faead036e6c9cfbbf0b78c7c02ca4799 367 PIRSF PIRSF000729 1 367 6.7E-146 T 06-07-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 LFZ55_RS17065 41d10079efd079ab07998d70fbcef927 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 7 29 7.8E-6 T 06-07-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 LFZ55_RS17065 41d10079efd079ab07998d70fbcef927 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 1.6E-9 T 06-07-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 LFZ55_RS03115 36d002cc748299f1db9020058a3f7a29 322 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 312 5.3E-122 T 06-07-2017 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 LFZ55_RS03115 36d002cc748299f1db9020058a3f7a29 322 Pfam PF03741 Integral membrane protein TerC family 80 282 7.0E-57 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 LFZ55_RS02875 9faea5656c0b8a78a13949d2eb8dd80b 191 Pfam PF04972 BON domain 124 189 4.4E-17 T 06-07-2017 IPR007055 BON domain LFZ55_RS02875 9faea5656c0b8a78a13949d2eb8dd80b 191 Pfam PF04972 BON domain 46 113 2.4E-13 T 06-07-2017 IPR007055 BON domain LFZ55_RS02875 9faea5656c0b8a78a13949d2eb8dd80b 191 SMART SM00749 51 114 3.8E-12 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria LFZ55_RS02875 9faea5656c0b8a78a13949d2eb8dd80b 191 SMART SM00749 129 191 3.6E-6 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria LFZ55_RS07525 1ce65e2b06ca31fda308f81c7b354e40 183 Gene3D G3DSA:3.60.21.10 1 163 6.3E-48 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS07525 1ce65e2b06ca31fda308f81c7b354e40 183 SUPERFAMILY SSF56300 1 163 5.99E-38 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS07525 1ce65e2b06ca31fda308f81c7b354e40 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 3.7E-25 T 06-07-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 LFZ55_RS07525 1ce65e2b06ca31fda308f81c7b354e40 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 06-07-2017 IPR020935 Phosphodiesterase YfcE, conserved site LFZ55_RS07525 1ce65e2b06ca31fda308f81c7b354e40 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 5.3E-43 T 06-07-2017 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 455 932 2.1E-120 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 SUPERFAMILY SSF103515 616 932 6.93E-49 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 Gene3D G3DSA:2.160.20.20 73 576 2.0E-59 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 SUPERFAMILY SSF51126 61 559 3.01E-53 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 Gene3D G3DSA:2.40.128.130 609 932 1.5E-87 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 SMART SM00869 653 921 9.2E-43 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 Pfam PF03212 Pertactin 438 555 1.6E-8 T 06-07-2017 IPR004899 Pertactin, central region LFZ55_RS00385 2f33b8ad160cab03142509818eb03457 932 Pfam PF03797 Autotransporter beta-domain 654 918 1.4E-46 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 SUPERFAMILY SSF50331 239 345 2.21E-13 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 Gene3D G3DSA:3.40.50.300 3 244 4.4E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 Pfam PF00005 ABC transporter 18 164 1.3E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 SMART SM00382 27 214 3.0E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 SUPERFAMILY SSF52540 3 244 4.52E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.7E-125 T 06-07-2017 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 LFZ55_RS07035 77fc2fee5592c516071e7a7a41f0191b 365 Pfam PF12857 TOBE-like domain 289 339 8.2E-7 T 06-07-2017 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 SUPERFAMILY SSF53774 3 335 2.22E-113 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 06-07-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 SMART SM00870 5 323 7.4E-143 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 PIRSF PIRSF001220 1 334 4.2E-98 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 PIRSF PIRSF500176 2 332 1.3E-118 T 06-07-2017 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.2E-65 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.2E-16 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.2E-16 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.2E-16 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.0E-138 T 06-07-2017 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 Gene3D G3DSA:3.40.50.40 211 335 6.2E-51 T 06-07-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 Gene3D G3DSA:3.40.50.1170 5 197 2.6E-78 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LFZ55_RS13730 9a245c49f800121a2e3e4d5cd83afe68 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 06-07-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 157 168 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 8 25 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 143 153 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 179 192 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 87 102 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 PRINTS PR00988 Uridine kinase signature 42 53 3.7E-39 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 4.6E-46 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 4.2E-98 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.823 T 06-07-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 Gene3D G3DSA:3.40.50.300 3 205 8.5E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08650 4853e40789e4f69a0494756a10b84c0d 213 SUPERFAMILY SSF52540 8 205 1.04E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 SUPERFAMILY SSF90002 224 315 1.05E-24 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 3.4E-18 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 Gene3D G3DSA:3.30.1220.10 207 315 5.4E-31 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 SMART SM00833 224 317 1.5E-9 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 1.7E-50 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 SUPERFAMILY SSF52540 3 202 1.18E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20605 e480e7f099ed329497483fe70055a5ff 318 Gene3D G3DSA:3.40.50.300 3 201 3.6E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Pfam PF13247 4Fe-4S dicluster domain 55 104 3.2E-8 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Pfam PF12798 4Fe-4S binding domain 131 151 0.13 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Gene3D G3DSA:3.30.70.20 6 69 1.4E-9 T 06-07-2017 LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Gene3D G3DSA:3.30.70.20 96 167 1.7E-15 T 06-07-2017 LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Pfam PF12800 4Fe-4S binding domain 10 22 0.42 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 SUPERFAMILY SSF54862 1 170 2.93E-43 T 06-07-2017 LFZ55_RS05190 a9262dbd6828eaafcd407ee6afc35ddd 181 Gene3D G3DSA:3.30.70.20 70 95 5.5E-20 T 06-07-2017 LFZ55_RS21375 cc1e1e36af4c8d997b4068f4aa9ef1f9 213 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 4.3E-118 T 06-07-2017 IPR025456 Protein of unknown function DUF4310 LFZ55_RS21375 cc1e1e36af4c8d997b4068f4aa9ef1f9 213 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 6.8E-109 T 06-07-2017 IPR025456 Protein of unknown function DUF4310 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 3.5E-99 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 Pfam PF00849 RNA pseudouridylate synthase 101 249 1.3E-29 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 SUPERFAMILY SSF55120 95 314 8.96E-66 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 Gene3D G3DSA:3.10.290.10 20 68 1.5E-7 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 SUPERFAMILY SSF55174 19 70 4.42E-9 T 06-07-2017 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 SMART SM00363 20 79 9.9E-10 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS14325 8081ef1132a9c3171e69ec2a9d0a5c0c 317 Pfam PF01479 S4 domain 20 66 1.7E-10 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 SUPERFAMILY SSF51445 263 603 1.48E-90 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 SUPERFAMILY SSF51011 586 665 2.52E-20 T 06-07-2017 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 SUPERFAMILY SSF74650 1 247 6.59E-66 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 Pfam PF13802 Galactose mutarotase-like 159 218 3.2E-15 T 06-07-2017 IPR025887 Glycoside hydrolase family 31, N-terminal domain LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 Pfam PF01055 Glycosyl hydrolases family 31 240 667 4.8E-117 T 06-07-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 Gene3D G3DSA:3.20.20.70 275 350 1.4E-13 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 Gene3D G3DSA:3.20.20.70 385 445 1.4E-13 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00495 6e57cac25f78bdb56f0c444d112d5f57 772 SUPERFAMILY SSF117125 666 772 1.14E-34 T 06-07-2017 LFZ55_RS12875 8e79afeb0b2b024fb9e930f956818a5e 502 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 1.1E-138 T 06-07-2017 IPR010352 Protein of unknown function DUF945 LFZ55_RS13425 0bd23348116671527efc467c9a5f593e 348 Pfam PF00793 DAHP synthetase I family 43 337 1.1E-106 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS13425 0bd23348116671527efc467c9a5f593e 348 Gene3D G3DSA:3.20.20.70 8 347 2.9E-147 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS13425 0bd23348116671527efc467c9a5f593e 348 PIRSF PIRSF001361 1 348 1.4E-157 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS13425 0bd23348116671527efc467c9a5f593e 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.8E-173 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 LFZ55_RS13425 0bd23348116671527efc467c9a5f593e 348 SUPERFAMILY SSF51569 7 347 2.01E-131 T 06-07-2017 LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 SUPERFAMILY SSF52540 109 379 7.15E-93 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 450 3.2E-196 T 06-07-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 SMART SM00382 174 357 7.4E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 7.1E-71 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 1.2E-196 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS09565 48eaebaecf56bedfc5d436cea004eee3 456 Gene3D G3DSA:3.40.50.300 139 421 1.2E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.9E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 305 322 1.9E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.9E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.9E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 1.9E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 Pfam PF00267 Gram-negative porin 26 350 8.7E-151 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 Gene3D G3DSA:2.40.160.10 21 350 2.2E-104 T 06-07-2017 IPR023614 Porin domain LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 SUPERFAMILY SSF56935 21 350 4.19E-79 T 06-07-2017 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 50 68 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 21 37 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 2.5E-71 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS19000 2b0e20ef4c14a51c0dff60e8d7cf3563 350 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 305 321 - T 06-07-2017 IPR013793 Porin, Gram-negative type, conserved site LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 Pfam PF00301 Rubredoxin 295 341 3.7E-18 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 SUPERFAMILY SSF57802 295 347 5.89E-18 T 06-07-2017 LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 167 283 3.0E-63 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 56 150 2.0E-9 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 167 282 4.5E-37 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 84 147 2.1E-8 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 PRINTS PR00163 Rubredoxin signature 325 341 3.6E-8 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 PRINTS PR00163 Rubredoxin signature 295 311 3.6E-8 T 06-07-2017 IPR024935 Rubredoxin domain GO:0005506 LFZ55_RS12495 8fc5a2592f3b4d26a36dd8dcfdd789f5 353 Gene3D G3DSA:2.20.28.10 295 345 9.9E-20 T 06-07-2017 IPR004039 Rubredoxin-type fold LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 SUPERFAMILY SSF55073 230 387 1.41E-21 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 7.3E-29 T 06-07-2017 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 SUPERFAMILY SSF141868 403 642 6.41E-35 T 06-07-2017 IPR001633 EAL domain LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 SMART SM00052 395 635 1.3E-56 T 06-07-2017 IPR001633 EAL domain LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 Gene3D G3DSA:3.30.70.270 227 391 5.8E-24 T 06-07-2017 LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 SMART SM00267 213 385 5.0E-32 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 Gene3D G3DSA:3.20.20.450 398 638 2.2E-34 T 06-07-2017 IPR001633 EAL domain LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 Pfam PF00563 EAL domain 403 628 5.2E-35 T 06-07-2017 IPR001633 EAL domain LFZ55_RS02370 0f18526999fd7dcecdc240a94c7ec7ab 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 1.9E-27 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS19065 ac135658ce489d544685ba6ba2c6ccdc 93 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 4 93 1.7E-10 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS19065 ac135658ce489d544685ba6ba2c6ccdc 93 SUPERFAMILY SSF103515 9 93 6.41E-9 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS19065 ac135658ce489d544685ba6ba2c6ccdc 93 Gene3D G3DSA:2.40.128.130 3 93 1.7E-11 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 3.7E-156 T 06-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 PIRSF PIRSF001549 2 423 4.7E-128 T 06-07-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 4.7E-47 T 06-07-2017 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Gene3D G3DSA:3.40.50.800 328 422 2.6E-33 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Gene3D G3DSA:3.30.930.10 221 320 1.3E-98 T 06-07-2017 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Gene3D G3DSA:3.30.930.10 4 185 1.3E-98 T 06-07-2017 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 SUPERFAMILY SSF52954 329 423 6.05E-26 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 SUPERFAMILY SSF55681 5 318 8.56E-105 T 06-07-2017 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.811 T 06-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 LFZ55_RS06275 70a3258072d05e5461fcd815aaab9253 424 Pfam PF03129 Anticodon binding domain 334 420 3.8E-11 T 06-07-2017 IPR004154 Anticodon-binding LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 1.7E-7 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 6.3E-26 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 651 1.2E-6 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Gene3D G3DSA:1.10.730.10 648 795 2.3E-44 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 SUPERFAMILY SSF50677 226 415 5.76E-57 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 SUPERFAMILY SSF52374 416 668 1.03E-140 T 06-07-2017 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 SUPERFAMILY SSF52374 5 226 1.03E-140 T 06-07-2017 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Gene3D G3DSA:3.40.50.620 425 573 2.0E-151 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Gene3D G3DSA:3.40.50.620 618 647 2.0E-151 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Gene3D G3DSA:3.40.50.620 4 222 2.0E-151 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Gene3D G3DSA:3.90.740.10 223 424 1.9E-61 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.279 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 6.4E-17 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.4E-78 T 06-07-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LFZ55_RS17325 423683514f280e7dfccacdade7d6e01e 860 SUPERFAMILY SSF47323 662 859 2.99E-36 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS24025 36a4d552a37cefdedc986130d6d5c3db 483 Pfam PF05762 VWA domain containing CoxE-like protein 305 458 9.9E-10 T 06-07-2017 IPR008912 Uncharacterised protein family CoxE-like LFZ55_RS24025 36a4d552a37cefdedc986130d6d5c3db 483 SMART SM00327 319 483 3.7E-12 T 06-07-2017 IPR002035 von Willebrand factor, type A LFZ55_RS24025 36a4d552a37cefdedc986130d6d5c3db 483 SUPERFAMILY SSF53300 318 459 1.22E-17 T 06-07-2017 IPR002035 von Willebrand factor, type A LFZ55_RS24025 36a4d552a37cefdedc986130d6d5c3db 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 58.693 T 06-07-2017 IPR023481 Uncharacterised protein family ViaA LFZ55_RS21400 95301e4e5e05e3aa2f7c22b9cf8fb893 128 PIRSF PIRSF000029 1 128 4.2E-63 T 06-07-2017 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 LFZ55_RS21400 95301e4e5e05e3aa2f7c22b9cf8fb893 128 Pfam PF07361 Cytochrome b562 24 128 1.6E-32 T 06-07-2017 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 LFZ55_RS21400 95301e4e5e05e3aa2f7c22b9cf8fb893 128 SUPERFAMILY SSF47175 23 128 1.62E-34 T 06-07-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 LFZ55_RS21400 95301e4e5e05e3aa2f7c22b9cf8fb893 128 Gene3D G3DSA:1.20.120.10 23 128 7.4E-45 T 06-07-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 LFZ55_RS04895 9c224adc5480fdefd9b0a180fdd4d003 402 Pfam PF07690 Major Facilitator Superfamily 12 347 4.2E-40 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS04895 9c224adc5480fdefd9b0a180fdd4d003 402 SUPERFAMILY SSF103473 3 391 4.71E-59 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS04895 9c224adc5480fdefd9b0a180fdd4d003 402 ProSitePatterns PS00217 Sugar transport proteins signature 2. 103 128 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS04895 9c224adc5480fdefd9b0a180fdd4d003 402 Gene3D G3DSA:1.20.1250.20 203 392 9.2E-18 T 06-07-2017 LFZ55_RS04895 9c224adc5480fdefd9b0a180fdd4d003 402 Gene3D G3DSA:1.20.1250.20 3 184 1.3E-23 T 06-07-2017 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 SUPERFAMILY SSF56752 7 307 1.44E-104 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 06-07-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.7E-145 T 06-07-2017 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 Gene3D G3DSA:3.20.10.10 135 295 4.6E-57 T 06-07-2017 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 Gene3D G3DSA:3.30.470.10 7 130 1.3E-43 T 06-07-2017 LFZ55_RS23910 9b0f408858f05c36c662d842bff3423a 309 Pfam PF01063 Amino-transferase class IV 36 268 1.0E-50 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS22185 aec782e1351c5cb3dd6c862d685f29e4 198 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 11 194 1.9E-58 T 06-07-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LFZ55_RS22185 aec782e1351c5cb3dd6c862d685f29e4 198 PIRSF PIRSF020680 1 198 8.9E-64 T 06-07-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LFZ55_RS22185 aec782e1351c5cb3dd6c862d685f29e4 198 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 10 196 1.7E-61 T 06-07-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LFZ55_RS22185 aec782e1351c5cb3dd6c862d685f29e4 198 SUPERFAMILY SSF159709 17 197 1.31E-57 T 06-07-2017 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 Gene3D G3DSA:3.20.20.140 56 344 6.1E-97 T 06-07-2017 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 Gene3D G3DSA:2.30.40.10 350 366 2.7E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 Gene3D G3DSA:2.30.40.10 2 55 2.7E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 SUPERFAMILY SSF51556 54 350 4.81E-101 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 PIRSF PIRSF038994 1 380 3.4E-112 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 Pfam PF01979 Amidohydrolase family 50 379 4.3E-50 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 1.3E-176 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LFZ55_RS17190 4ab150258ecf4f6b9915dc5ad0ffa620 380 SUPERFAMILY SSF51338 1 53 3.74E-18 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 4.3E-109 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 8.8E-157 T 06-07-2017 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 Hamap MF_01293 D-tagatose-1,6-bisphosphate aldolase subunit KbaY [kbaY]. 1 286 70.868 T 06-07-2017 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY GO:0005975|GO:0008270|GO:0009025|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 Gene3D G3DSA:3.20.20.70 1 284 5.5E-107 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 SUPERFAMILY SSF51569 3 283 6.74E-97 T 06-07-2017 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 PIRSF PIRSF001359 1 284 1.6E-113 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS02900 ac62a5842801a7ebb89eea15ab7356f3 290 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 282 2.2E-95 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS06020 eccac8228c4a5d034180ad7bcb2f205d 89 Pfam PF00037 4Fe-4S binding domain 6 25 4.2E-6 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06020 eccac8228c4a5d034180ad7bcb2f205d 89 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06020 eccac8228c4a5d034180ad7bcb2f205d 89 Gene3D G3DSA:3.30.70.20 4 73 3.9E-17 T 06-07-2017 LFZ55_RS06020 eccac8228c4a5d034180ad7bcb2f205d 89 SUPERFAMILY SSF54862 5 68 1.4E-17 T 06-07-2017 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.7E-19 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.7E-19 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.7E-19 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.642 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 TIGRFAM TIGR00077 lspA: signal peptidase II 1 163 2.6E-59 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS20100 5fefc810b057c27cc7ef2d3ae1382d1b 166 Pfam PF01252 Signal peptidase (SPase) II 16 155 7.2E-35 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LFZ55_RS23470 c1790ba8259d8b97dbcecf37c28615fa 328 SUPERFAMILY SSF56112 6 327 2.19E-90 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS23470 c1790ba8259d8b97dbcecf37c28615fa 328 Pfam PF01636 Phosphotransferase enzyme family 32 256 4.6E-43 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase LFZ55_RS23470 c1790ba8259d8b97dbcecf37c28615fa 328 Gene3D G3DSA:3.90.1200.10 106 325 1.7E-45 T 06-07-2017 LFZ55_RS23470 c1790ba8259d8b97dbcecf37c28615fa 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 44.886 T 06-07-2017 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 SUPERFAMILY SSF55315 103 179 7.06E-10 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 SMART SM00967 109 184 4.0E-9 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 Gene3D G3DSA:3.40.1280.10 190 343 2.3E-37 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 PIRSF PIRSF006280 33 345 1.6E-159 T 06-07-2017 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 1.9E-12 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 Pfam PF00588 SpoU rRNA Methylase family 199 336 2.0E-28 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 Gene3D G3DSA:3.30.1330.30 102 178 2.2E-8 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like LFZ55_RS05920 085c9cc65da00cd847974926eb980362 345 SUPERFAMILY SSF75217 188 343 1.7E-36 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 251 1.6E-73 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 PIRSF PIRSF000398 1 271 2.9E-68 T 06-07-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.1E-19 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.1E-19 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.1E-19 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.1E-19 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 Gene3D G3DSA:3.40.50.150 1 59 3.3E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 Gene3D G3DSA:3.40.50.150 160 267 3.3E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 4.7E-103 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 SUPERFAMILY SSF53335 5 267 1.96E-77 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 Gene3D G3DSA:1.10.1020.10 60 157 1.3E-33 T 06-07-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 LFZ55_RS01770 558203e608c8c80dd47f144b05549e49 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 Pfam PF00561 alpha/beta hydrolase fold 89 328 1.1E-29 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 Gene3D G3DSA:3.40.50.1820 71 200 2.8E-26 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 Gene3D G3DSA:3.40.50.1820 276 352 2.8E-26 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 PIRSF PIRSF005211 23 355 2.6E-109 T 06-07-2017 IPR012020 AB hydrolase 4 family LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 SUPERFAMILY SSF53474 53 338 8.24E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS01875 f08ff1bae5a4dfb184cd5798a0fe1dc7 355 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 255 296 - T 06-07-2017 IPR000952 AB hydrolase 4, conserved site LFZ55_RS15265 d57920742af1f51982d6b8cc3ad4b32c 319 Gene3D G3DSA:1.25.40.10 54 243 1.2E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15265 d57920742af1f51982d6b8cc3ad4b32c 319 SUPERFAMILY SSF81901 68 248 2.96E-15 T 06-07-2017 LFZ55_RS15265 d57920742af1f51982d6b8cc3ad4b32c 319 SMART SM00671 207 239 1.7 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS15265 d57920742af1f51982d6b8cc3ad4b32c 319 SMART SM00671 129 164 1.0E-5 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS16065 156eae977f167dd749a00984653620aa 158 Pfam PF10722 Putative bacterial sensory transduction regulator 8 131 6.5E-16 T 06-07-2017 IPR019660 Putative sensory transduction regulator YbjN LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 50.152 T 06-07-2017 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Gene3D G3DSA:1.10.10.60 229 276 6.3E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Pfam PF12833 Helix-turn-helix domain 203 275 8.8E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 1.6E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 1.6E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 SUPERFAMILY SSF46689 228 276 4.08E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Pfam PF02311 AraC-like ligand binding domain 23 148 1.9E-19 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 SMART SM00342 192 275 8.2E-30 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Gene3D G3DSA:2.60.120.280 27 162 1.2E-13 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 SUPERFAMILY SSF51182 7 155 2.31E-15 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS23185 8ee651ef0b8a9e29f499656675f1f9e1 282 Gene3D G3DSA:1.10.10.60 174 228 3.5E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13460 8aeca813eadb84de3f65fd0f77c380b8 326 SUPERFAMILY SSF81345 6 323 3.53E-84 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS13460 8aeca813eadb84de3f65fd0f77c380b8 326 Pfam PF01032 FecCD transport family 22 323 3.7E-86 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS13460 8aeca813eadb84de3f65fd0f77c380b8 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.424 T 06-07-2017 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 LFZ55_RS13460 8aeca813eadb84de3f65fd0f77c380b8 326 Gene3D G3DSA:1.10.3470.10 6 324 9.5E-102 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS14025 a6b06c3145a26d9998202cfd5c4341ae 173 Pfam PF00652 Ricin-type beta-trefoil lectin domain 56 165 3.2E-19 T 06-07-2017 IPR000772 Ricin B, lectin domain LFZ55_RS14025 a6b06c3145a26d9998202cfd5c4341ae 173 SMART SM00458 54 173 1.7E-11 T 06-07-2017 IPR000772 Ricin B, lectin domain LFZ55_RS14025 a6b06c3145a26d9998202cfd5c4341ae 173 Gene3D G3DSA:2.80.10.50 56 164 8.0E-24 T 06-07-2017 LFZ55_RS14025 a6b06c3145a26d9998202cfd5c4341ae 173 SUPERFAMILY SSF50370 58 165 1.1E-20 T 06-07-2017 IPR000772 Ricin B, lectin domain LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 58.301 T 06-07-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 2.5E-6 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 2.5E-6 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 5.5E-50 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 SUPERFAMILY SSF55681 12 320 1.15E-85 T 06-07-2017 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 9.6E-135 T 06-07-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 LFZ55_RS21805 f5f5c9031359315ee9b551dc1f71f81d 325 Gene3D G3DSA:3.30.930.10 15 320 1.2E-75 T 06-07-2017 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 Pfam PF00654 Voltage gated chloride channel 77 414 1.3E-71 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 PRINTS PR00762 Chloride channel signature 364 380 1.5E-19 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 PRINTS PR00762 Chloride channel signature 329 349 1.5E-19 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 PRINTS PR00762 Chloride channel signature 165 184 1.5E-19 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 PRINTS PR00762 Chloride channel signature 382 401 1.5E-19 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 PRINTS PR00762 Chloride channel signature 115 134 1.5E-19 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 Gene3D G3DSA:1.10.3080.10 11 426 1.6E-70 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12745 e14c6af89c20e65426eb29b2ec7ad33d 429 SUPERFAMILY SSF81340 5 425 2.88E-87 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS12505 9a6dc7a42970a587505be1f03a3b30a8 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 6.6E-30 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS12505 9a6dc7a42970a587505be1f03a3b30a8 113 PIRSF PIRSF004761 1 113 1.5E-35 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS12505 9a6dc7a42970a587505be1f03a3b30a8 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 3.5E-27 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS12505 9a6dc7a42970a587505be1f03a3b30a8 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 21.528 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 SMART SM00388 233 293 7.0E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 SMART SM00387 332 440 5.1E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 Pfam PF00672 HAMP domain 162 226 3.2E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 Gene3D G3DSA:3.30.565.10 292 444 5.8E-36 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 SUPERFAMILY SSF47384 227 289 9.22E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 SMART SM00304 180 232 6.2E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 SUPERFAMILY SSF55874 292 441 1.31E-34 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.3E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 3.1E-10 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.1E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.1E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.1E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS01680 15a71dea05d17b8587cae00fbc3f8f1e 450 Gene3D G3DSA:1.10.287.130 223 288 2.8E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 SUPERFAMILY SSF52540 4 204 2.19E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 SUPERFAMILY SSF52540 441 569 2.19E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:1.10.8.280 286 406 3.0E-45 T 06-07-2017 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.169 T 06-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 06-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.30.1490.20 130 153 8.3E-28 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.30.1490.20 200 248 8.3E-28 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:1.20.1580.10 694 820 5.3E-54 T 06-07-2017 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.40.50.300 821 939 3.9E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.40.50.300 478 598 2.5E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.40.50.300 602 692 3.9E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:3.40.50.300 2 51 2.5E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 SUPERFAMILY SSF52540 613 911 5.21E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:1.20.1580.10 251 284 3.7E-54 T 06-07-2017 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:1.20.1580.10 91 129 3.7E-54 T 06-07-2017 LFZ55_RS22415 47ebdb33d5975839353e8d7c842da423 941 Gene3D G3DSA:1.20.1580.10 407 477 3.7E-54 T 06-07-2017 LFZ55_RS04230 14ddae7d72c72695ed9887868b61cef9 363 PIRSF PIRSF037390 6 361 1.6E-121 T 06-07-2017 IPR017192 Thiosulphate:quinone oxidoreductase, fused subunit DoxA/ DoxD LFZ55_RS04230 14ddae7d72c72695ed9887868b61cef9 363 Pfam PF04173 TQO small subunit DoxD 25 171 2.4E-28 T 06-07-2017 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 LFZ55_RS04230 14ddae7d72c72695ed9887868b61cef9 363 Pfam PF07680 TQO small subunit DoxA 237 354 4.4E-8 T 06-07-2017 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 SMART SM00448 1 112 3.3E-40 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 1.2E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 SMART SM00862 144 217 6.1E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 SUPERFAMILY SSF52172 1 132 4.55E-38 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 Pfam PF00072 Response regulator receiver domain 4 112 6.1E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 Gene3D G3DSA:1.10.10.10 150 218 1.8E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 SUPERFAMILY SSF46894 128 218 2.83E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS05500 1c182dd17d75086fc76f4515a9bf6743 224 Gene3D G3DSA:3.40.50.2300 1 149 7.0E-39 T 06-07-2017 LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 Gene3D G3DSA:3.40.50.1000 119 209 4.2E-5 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 Gene3D G3DSA:3.40.50.1000 100 118 5.2E-5 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 Gene3D G3DSA:3.40.50.1000 5 29 5.2E-5 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 3 211 1.3E-131 T 06-07-2017 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 SUPERFAMILY SSF56784 6 154 2.34E-7 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS06040 4ebb564de8d6b482fd8c82c447ba5218 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 2.7E-11 T 06-07-2017 LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 Gene3D G3DSA:3.30.70.20 72 116 9.6E-27 T 06-07-2017 LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 SUPERFAMILY SSF54862 6 155 2.83E-61 T 06-07-2017 LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 Gene3D G3DSA:3.30.70.20 117 166 4.3E-17 T 06-07-2017 LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 Gene3D G3DSA:3.30.70.20 7 71 1.4E-17 T 06-07-2017 LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 Pfam PF13247 4Fe-4S dicluster domain 57 152 1.8E-24 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS08925 904cd6a1d3316e45603c1f1a126ef615 192 Pfam PF12800 4Fe-4S binding domain 15 28 0.0039 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS04425 379d0e4caadd4bae786a2d7dc2489683 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LFZ55_RS04425 379d0e4caadd4bae786a2d7dc2489683 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 8.6E-77 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LFZ55_RS04425 379d0e4caadd4bae786a2d7dc2489683 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 1.8E-110 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LFZ55_RS04425 379d0e4caadd4bae786a2d7dc2489683 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.536 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 SUPERFAMILY SSF103088 217 334 3.79E-18 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 Pfam PF00691 OmpA family 226 312 1.0E-12 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 SUPERFAMILY SSF56925 28 192 4.97E-29 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 Pfam PF01389 OmpA-like transmembrane domain 30 193 5.3E-31 T 06-07-2017 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 Gene3D G3DSA:2.40.160.20 17 196 6.8E-44 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 Gene3D G3DSA:3.30.1330.60 217 334 3.3E-19 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 PRINTS PR01022 Outer membrane protein A signature 105 121 3.9E-5 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 PRINTS PR01022 Outer membrane protein A signature 178 192 3.9E-5 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS18825 6723c27a11b54e018a8af10c1f512fe1 336 PRINTS PR01022 Outer membrane protein A signature 281 300 3.9E-5 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 8.1E-27 T 06-07-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.9E-31 T 06-07-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Gene3D G3DSA:3.40.50.1100 38 117 4.2E-4 T 06-07-2017 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 SUPERFAMILY SSF55021 420 512 6.18E-25 T 06-07-2017 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 SUPERFAMILY SSF55021 336 423 5.04E-27 T 06-07-2017 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 SUPERFAMILY SSF53686 15 364 9.04E-102 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.3E-267 T 06-07-2017 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 3.1E-77 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Gene3D G3DSA:3.40.1020.10 343 512 3.2E-56 T 06-07-2017 LFZ55_RS23900 2b92e034a53d1e9f6d4b4bf1da73f7d3 514 Gene3D G3DSA:3.40.50.1100 118 342 7.4E-75 T 06-07-2017 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.5E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 Gene3D G3DSA:1.10.10.10 2 82 3.0E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 Pfam PF03466 LysR substrate binding domain 86 286 4.4E-52 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 SUPERFAMILY SSF53850 88 286 6.08E-48 T 06-07-2017 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 Gene3D G3DSA:3.40.190.10 86 225 1.4E-35 T 06-07-2017 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08250 76901c4befca1e0a6a4d0afba37ed309 287 SUPERFAMILY SSF46785 2 109 1.9E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07510 1dacbf6fac4270c3f72b76724bf881f7 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 7.2E-108 T 06-07-2017 IPR010099 Epimerase family protein SDR39U1 LFZ55_RS07510 1dacbf6fac4270c3f72b76724bf881f7 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 9.2E-25 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS07510 1dacbf6fac4270c3f72b76724bf881f7 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 2.0E-18 T 06-07-2017 IPR013549 Domain of unknown function DUF1731 LFZ55_RS07510 1dacbf6fac4270c3f72b76724bf881f7 297 SUPERFAMILY SSF51735 1 296 5.87E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07510 1dacbf6fac4270c3f72b76724bf881f7 297 Gene3D G3DSA:3.40.50.720 1 248 1.8E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 SUPERFAMILY SSF51905 178 207 2.08E-20 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 SUPERFAMILY SSF51905 249 416 2.08E-20 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 SUPERFAMILY SSF51905 1 74 2.08E-20 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 48.121 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 Gene3D G3DSA:3.50.50.60 254 416 3.2E-20 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 Gene3D G3DSA:3.50.50.60 1 53 3.2E-20 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 PIRSF PIRSF000141 1 418 1.3E-169 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 3.9E-175 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LFZ55_RS07815 33c938d923060adc57a347cba000e412 419 Pfam PF00890 FAD binding domain 4 399 2.1E-60 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS10700 227e334ba861545cc0fba3d2af8f4670 366 PIRSF PIRSF017494 4 363 8.7E-153 T 06-07-2017 IPR010091 Thiazolinyl imide reductase LFZ55_RS10700 227e334ba861545cc0fba3d2af8f4670 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 3.1E-160 T 06-07-2017 IPR010091 Thiazolinyl imide reductase LFZ55_RS10700 227e334ba861545cc0fba3d2af8f4670 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 3.4E-24 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS10700 227e334ba861545cc0fba3d2af8f4670 366 SUPERFAMILY SSF51735 8 140 2.32E-14 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10700 227e334ba861545cc0fba3d2af8f4670 366 Gene3D G3DSA:3.40.50.720 1 129 3.9E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19620 2de2d49c0fdc727d3a1a347635ef0e5b 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 6.1E-159 T 06-07-2017 IPR031347 Protein AmpE LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 SUPERFAMILY SSF55681 4 204 4.14E-68 T 06-07-2017 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 Gene3D G3DSA:3.90.1550.10 4 202 4.9E-70 T 06-07-2017 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 PIRSF PIRSF016262 2 210 3.4E-57 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 3.0E-24 T 06-07-2017 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 2.9E-7 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 06-07-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.239 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS17390 e5cbeba95f7b04491fc9a5aabe024a34 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 204 6.6E-82 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 Gene3D G3DSA:1.20.950.20 33 244 1.7E-25 T 06-07-2017 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 Pfam PF01292 Prokaryotic cytochrome b561 37 242 1.6E-27 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 SUPERFAMILY SSF81342 34 245 9.42E-37 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 155 174 2.9E-44 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 203 225 2.9E-44 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 234 247 2.9E-44 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 39 62 2.9E-44 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 77 101 2.9E-44 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 35 245 1.6E-66 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS12475 2dedb6ba5e78dea173d6d857417fce36 247 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 42 59 - T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 SUPERFAMILY SSF51735 4 147 6.1E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 Gene3D G3DSA:3.40.50.720 2 136 6.4E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 241 7.4E-16 T 06-07-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 SUPERFAMILY SSF55347 126 265 4.25E-23 T 06-07-2017 LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 Gene3D G3DSA:3.30.360.10 137 254 1.7E-26 T 06-07-2017 LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 Gene3D G3DSA:3.30.360.10 305 364 1.7E-26 T 06-07-2017 LFZ55_RS14830 eb2b29ed067e4827dfe6e27d4732867c 368 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 3.1E-28 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS11310 4af1cca5de83f3be9c92d0166b9c5754 235 SUPERFAMILY SSF141868 6 212 9.55E-16 T 06-07-2017 IPR001633 EAL domain LFZ55_RS11310 4af1cca5de83f3be9c92d0166b9c5754 235 Pfam PF00563 EAL domain 14 211 3.3E-9 T 06-07-2017 IPR001633 EAL domain LFZ55_RS11310 4af1cca5de83f3be9c92d0166b9c5754 235 Gene3D G3DSA:3.20.20.450 102 223 4.1E-7 T 06-07-2017 IPR001633 EAL domain LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 5.4E-151 T 06-07-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 SUPERFAMILY SSF55729 1 337 3.46E-133 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 2.1E-162 T 06-07-2017 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 68.56 T 06-07-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 Gene3D G3DSA:3.40.630.30 3 150 6.3E-8 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 Gene3D G3DSA:3.40.630.30 218 247 6.3E-8 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 Gene3D G3DSA:2.40.40.20 275 337 5.3E-11 T 06-07-2017 LFZ55_RS13665 79c40b409bb6fec5338fe067f0d0ed69 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.2E-144 T 06-07-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 LFZ55_RS09985 ea80cd63708913b4aa4638ef6a119748 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 4.0E-151 T 06-07-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 LFZ55_RS09985 ea80cd63708913b4aa4638ef6a119748 323 PIRSF PIRSF026649 9 314 5.4E-103 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS09985 ea80cd63708913b4aa4638ef6a119748 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 52.967 T 06-07-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 LFZ55_RS09985 ea80cd63708913b4aa4638ef6a119748 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 6.8E-108 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS20960 a8c6ca9f7a2fe04a089d414b85d6bdd0 226 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 13 226 3.5E-46 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type LFZ55_RS20960 a8c6ca9f7a2fe04a089d414b85d6bdd0 226 Pfam PF14348 Domain of unknown function (DUF4400) 57 223 4.1E-33 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type LFZ55_RS04155 72f0e6e8ddc2ee780874c2e97dbbe188 578 Pfam PF01368 DHH family 73 215 4.5E-11 T 06-07-2017 IPR001667 DDH domain LFZ55_RS04155 72f0e6e8ddc2ee780874c2e97dbbe188 578 SUPERFAMILY SSF64182 49 466 5.62E-116 T 06-07-2017 LFZ55_RS04155 72f0e6e8ddc2ee780874c2e97dbbe188 578 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 575 5.9E-167 T 06-07-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 LFZ55_RS04155 72f0e6e8ddc2ee780874c2e97dbbe188 578 Pfam PF02272 DHHA1 domain 383 450 1.7E-16 T 06-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 Pfam PF08323 Starch synthase catalytic domain 2 234 5.1E-73 T 06-07-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.833 T 06-07-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 Pfam PF00534 Glycosyl transferases group 1 287 438 1.0E-12 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 4.5E-174 T 06-07-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 Gene3D G3DSA:3.40.50.2000 251 457 2.1E-68 T 06-07-2017 LFZ55_RS01575 a31e5a6bdaff7608240d11e139cb7411 477 SUPERFAMILY SSF53756 5 476 6.63E-117 T 06-07-2017 LFZ55_RS18035 5ca509b8c3a5a5de1273b648240074d8 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 1.5E-73 T 06-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 LFZ55_RS18035 5ca509b8c3a5a5de1273b648240074d8 183 Gene3D G3DSA:3.40.50.2020 7 179 6.0E-70 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS18035 5ca509b8c3a5a5de1273b648240074d8 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.38 T 06-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 LFZ55_RS18035 5ca509b8c3a5a5de1273b648240074d8 183 SUPERFAMILY SSF53271 13 180 4.12E-53 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS18035 5ca509b8c3a5a5de1273b648240074d8 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 7.0E-15 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS23810 baedc72f3f602f5ab60cd17fbfea7117 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 3.0E-161 T 06-07-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LFZ55_RS23810 baedc72f3f602f5ab60cd17fbfea7117 355 Gene3D G3DSA:3.90.25.10 193 343 3.0E-56 T 06-07-2017 LFZ55_RS23810 baedc72f3f602f5ab60cd17fbfea7117 355 Gene3D G3DSA:3.40.50.720 1 192 4.1E-65 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23810 baedc72f3f602f5ab60cd17fbfea7117 355 SUPERFAMILY SSF51735 1 339 2.27E-96 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23810 baedc72f3f602f5ab60cd17fbfea7117 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 3.1E-100 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17845 b81ab298630cf75feb4677dfc67e4e7f 70 Pfam PF13275 S4 domain 9 68 5.1E-24 T 06-07-2017 LFZ55_RS17845 b81ab298630cf75feb4677dfc67e4e7f 70 Gene3D G3DSA:3.10.290.10 3 68 1.8E-27 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS17845 b81ab298630cf75feb4677dfc67e4e7f 70 SUPERFAMILY SSF55174 7 68 3.4E-19 T 06-07-2017 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 Gene3D G3DSA:3.30.70.20 113 160 7.3E-11 T 06-07-2017 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 36 47 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 Pfam PF12800 4Fe-4S binding domain 36 48 0.084 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 Gene3D G3DSA:3.30.70.20 70 112 5.4E-5 T 06-07-2017 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 SUPERFAMILY SSF54862 29 158 1.99E-17 T 06-07-2017 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 Gene3D G3DSA:3.30.70.20 35 69 2.9E-9 T 06-07-2017 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 155 1.0E-57 T 06-07-2017 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 LFZ55_RS07920 68de4936059120d389213a4bcae1b17d 163 Pfam PF12838 4Fe-4S dicluster domain 107 154 1.1E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 Gene3D G3DSA:3.40.50.720 395 530 2.3E-34 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 SUPERFAMILY SSF51735 401 527 2.12E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 1.2E-61 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.0E-8 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.0E-8 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.0E-8 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.0E-8 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 1.6E-91 T 06-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 55.643 T 06-07-2017 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 LFZ55_RS19965 17afe10cb3d8d466e56e1a91201b9cd1 620 Pfam PF02254 TrkA-N domain 402 511 2.3E-25 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SUPERFAMILY SSF50249 83 171 8.57E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 Pfam PF00575 S1 RNA binding domain 559 636 3.5E-11 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SMART SM00955 189 517 1.2E-125 T 06-07-2017 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 06-07-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 Pfam PF00773 RNB domain 189 516 4.5E-84 T 06-07-2017 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SUPERFAMILY SSF50249 560 642 9.14E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 06-07-2017 IPR022966 Ribonuclease II/R, conserved site LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SUPERFAMILY SSF50249 177 556 9.85E-115 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SMART SM00357 23 79 1.1E-13 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 Pfam PF08206 Ribonuclease B OB domain 24 80 4.0E-19 T 06-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 SUPERFAMILY SSF50249 8 80 5.78E-16 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.358 T 06-07-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 LFZ55_RS11285 b5871ae1571561daa421f6dc577fb688 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 1.7E-244 T 06-07-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LFZ55_RS14880 8b871177cc9873f825db83c404e3f040 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS14880 8b871177cc9873f825db83c404e3f040 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.4E-132 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS14880 8b871177cc9873f825db83c404e3f040 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS14880 8b871177cc9873f825db83c404e3f040 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 2.5E-236 T 06-07-2017 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 LFZ55_RS14880 8b871177cc9873f825db83c404e3f040 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.9E-146 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Gene3D G3DSA:3.40.1450.10 80 310 5.6E-98 T 06-07-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 PIRSF PIRSF001492 1 514 1.2E-206 T 06-07-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Gene3D G3DSA:3.40.720.10 5 79 2.9E-88 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Gene3D G3DSA:3.40.720.10 315 510 2.9E-88 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.928 T 06-07-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 7.6E-245 T 06-07-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 SUPERFAMILY SSF53649 5 79 1.2E-72 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 SUPERFAMILY SSF53649 315 510 1.2E-72 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 SUPERFAMILY SSF64158 79 310 2.88E-85 T 06-07-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 3.7E-83 T 06-07-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00725 ad55254acb8b8fac41290772d02e0966 514 Pfam PF01676 Metalloenzyme superfamily 6 500 1.0E-83 T 06-07-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 LFZ55_RS01955 1ad1cf645ad76dee06680de7db76a17c 72 Pfam PF04102 SlyX 6 72 4.0E-24 T 06-07-2017 IPR007236 SlyX LFZ55_RS01955 1ad1cf645ad76dee06680de7db76a17c 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.363 T 06-07-2017 IPR007236 SlyX LFZ55_RS01955 1ad1cf645ad76dee06680de7db76a17c 72 Gene3D G3DSA:1.20.5.300 2 52 2.7E-21 T 06-07-2017 LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 SUPERFAMILY SSF55486 3 151 9.28E-50 T 06-07-2017 LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 2.6E-37 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.566 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 Pfam PF02130 Uncharacterized protein family UPF0054 22 142 4.0E-38 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 06-07-2017 IPR020549 Endoribonuclease YbeY, conserved site LFZ55_RS17270 19a79527e76a6bbdbce2a9469b1dce63 155 Gene3D G3DSA:3.40.390.30 12 153 1.0E-51 T 06-07-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 Gene3D G3DSA:1.10.10.10 1 83 1.6E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-24 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 Pfam PF03466 LysR substrate binding domain 88 293 2.9E-31 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 Gene3D G3DSA:3.40.190.10 88 179 4.4E-15 T 06-07-2017 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 Gene3D G3DSA:3.40.190.10 180 265 3.0E-18 T 06-07-2017 LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 SUPERFAMILY SSF46785 1 83 1.21E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14740 e3b7ac7440ae1022ebc04c081cdf2f6a 297 SUPERFAMILY SSF53850 88 294 4.34E-31 T 06-07-2017 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 Gene3D G3DSA:1.10.260.40 4 58 4.1E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.9E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 Gene3D G3DSA:3.40.50.2300 62 173 1.0E-32 T 06-07-2017 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 06-07-2017 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 SUPERFAMILY SSF53822 63 326 2.36E-55 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 Pfam PF13377 Periplasmic binding protein-like domain 178 328 1.1E-24 T 06-07-2017 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 SUPERFAMILY SSF47413 4 63 1.0E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 Gene3D G3DSA:3.40.50.2300 174 329 6.6E-41 T 06-07-2017 LFZ55_RS21190 7a4e7e46754af93042435fd8f5efa793 332 SMART SM00354 5 75 7.9E-29 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13430 7b96fb36acad1d8c26a647f80afe8438 63 Pfam PF10636 Hemin uptake protein hemP 27 63 1.9E-15 T 06-07-2017 IPR019600 Hemin uptake protein HemP LFZ55_RS13430 7b96fb36acad1d8c26a647f80afe8438 63 Gene3D G3DSA:2.10.70.10 23 63 2.9E-19 T 06-07-2017 LFZ55_RS13910 a70b301387f61f2c5acea80baa18a1c2 262 Gene3D G3DSA:3.30.460.10 18 106 1.1E-12 T 06-07-2017 LFZ55_RS13910 a70b301387f61f2c5acea80baa18a1c2 262 PIRSF PIRSF000819 9 256 5.7E-51 T 06-07-2017 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 LFZ55_RS13910 a70b301387f61f2c5acea80baa18a1c2 262 SUPERFAMILY SSF81301 13 102 8.83E-11 T 06-07-2017 LFZ55_RS13910 a70b301387f61f2c5acea80baa18a1c2 262 Pfam PF13427 Domain of unknown function (DUF4111) 153 255 1.1E-27 T 06-07-2017 IPR025184 Domain of unknown function DUF4111 LFZ55_RS13910 a70b301387f61f2c5acea80baa18a1c2 262 Pfam PF01909 Nucleotidyltransferase domain 30 60 1.0E-4 T 06-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 2.6E-117 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 Gene3D G3DSA:3.40.718.10 10 416 6.5E-170 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 SUPERFAMILY SSF53659 3 416 2.5E-150 T 06-07-2017 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 SMART SM01329 28 412 1.4E-180 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 06-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS14085 d35fe98630a00f1370cea92c8f25d57f 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 2.7E-239 T 06-07-2017 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 LFZ55_RS01430 f63f040c384fcec89392226712df123f 127 Gene3D G3DSA:3.40.630.30 23 88 1.9E-7 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS01430 f63f040c384fcec89392226712df123f 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 2.5E-48 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS01430 f63f040c384fcec89392226712df123f 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 32.149 T 06-07-2017 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 LFZ55_RS01430 f63f040c384fcec89392226712df123f 127 SUPERFAMILY SSF55729 17 121 3.54E-9 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 Gene3D G3DSA:3.30.1110.10 45 94 1.7E-7 T 06-07-2017 LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 Gene3D G3DSA:3.40.1190.20 337 433 1.6E-49 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 Gene3D G3DSA:3.40.1190.20 95 298 1.6E-49 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 SUPERFAMILY SSF53613 36 305 5.92E-46 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 SUPERFAMILY SSF53613 338 416 5.92E-46 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS17990 6d8189776b23a3f28073709e49da92d8 434 Pfam PF00294 pfkB family carbohydrate kinase 87 294 6.4E-10 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 Pfam PF00455 DeoR C terminal sensor domain 76 232 5.4E-43 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 SUPERFAMILY SSF46785 4 59 1.37E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 SUPERFAMILY SSF100950 76 233 4.94E-27 T 06-07-2017 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 2.0E-8 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 2.0E-8 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 SMART SM00420 5 57 3.4E-21 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 SMART SM01134 74 234 3.8E-51 T 06-07-2017 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 3.7E-19 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 Gene3D G3DSA:3.40.50.1360 78 214 8.2E-8 T 06-07-2017 LFZ55_RS04545 9868716ab9feb5683e15906ef708a1a1 236 Gene3D G3DSA:1.10.10.10 1 51 2.1E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 Gene3D G3DSA:3.40.35.10 161 320 5.9E-67 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 163 310 2.9E-56 T 06-07-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 Pfam PF03610 PTS system fructose IIA component 5 116 1.3E-35 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 Pfam PF03830 PTS system sorbose subfamily IIB component 163 309 2.2E-55 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 SUPERFAMILY SSF52728 161 319 3.66E-54 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 3.0E-51 T 06-07-2017 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 Gene3D G3DSA:3.40.50.510 3 133 2.2E-49 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS10385 145a2a11ae51b0dd712b39d5c29ac49a 322 SUPERFAMILY SSF53062 3 128 9.03E-38 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 SMART SM00855 3 157 1.4E-23 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.5E-58 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 60.929 T 06-07-2017 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 06-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 SUPERFAMILY SSF53254 1 208 4.06E-58 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS20375 0b298babb2c66efb0fd990abf59206a6 215 Gene3D G3DSA:3.40.50.1240 2 209 3.1E-62 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS18790 43805171859f124e85a1ad5b5d6393f7 182 Gene3D G3DSA:2.60.40.1090 30 182 3.8E-17 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18790 43805171859f124e85a1ad5b5d6393f7 182 SUPERFAMILY SSF49401 52 182 2.73E-15 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS18790 43805171859f124e85a1ad5b5d6393f7 182 Pfam PF00419 Fimbrial protein 32 181 2.7E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS21915 4efcf88e1ab0e6a9088f26765e34ae5d 191 SUPERFAMILY SSF48498 86 179 6.1E-6 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS21915 4efcf88e1ab0e6a9088f26765e34ae5d 191 SUPERFAMILY SSF46689 3 60 5.08E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS21915 4efcf88e1ab0e6a9088f26765e34ae5d 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 49 7.9E-6 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS21915 4efcf88e1ab0e6a9088f26765e34ae5d 191 Gene3D G3DSA:1.10.357.10 3 181 1.0E-21 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS15890 0b14e1c2f527c0f5c822fd4335ee9330 225 SUPERFAMILY SSF52499 12 208 2.09E-46 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS15890 0b14e1c2f527c0f5c822fd4335ee9330 225 Pfam PF00857 Isochorismatase family 20 172 1.1E-21 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS15890 0b14e1c2f527c0f5c822fd4335ee9330 225 Gene3D G3DSA:3.40.50.850 14 212 7.4E-45 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 1.8E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 1.8E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 1.8E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 SMART SM00421 133 190 2.9E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 SUPERFAMILY SSF46894 123 185 1.56E-15 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 183 5.4E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS21840 1e4d2410eaf71e407b27cd0dc6389e3b 195 Gene3D G3DSA:1.10.10.10 130 183 6.6E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00840 c93761d9d5417c9468703b5ded15783b 221 Gene3D G3DSA:3.20.20.70 3 216 6.5E-79 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00840 c93761d9d5417c9468703b5ded15783b 221 SUPERFAMILY SSF51366 3 217 7.76E-38 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS00840 c93761d9d5417c9468703b5ded15783b 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 207 1.0E-27 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS00840 c93761d9d5417c9468703b5ded15783b 221 SMART SM00934 6 208 1.6E-34 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 SUPERFAMILY SSF51905 399 460 1.71E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 SUPERFAMILY SSF51905 2 251 1.71E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 Pfam PF00890 FAD binding domain 3 431 2.3E-33 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 SUPERFAMILY SSF56425 234 395 2.34E-24 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 459 5.1E-205 T 06-07-2017 IPR012831 Precorrin 3B synthase CobZ LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 Gene3D G3DSA:3.50.50.60 396 458 1.4E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 Gene3D G3DSA:3.50.50.60 2 233 1.4E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17145 ad44bb1b26da2b45131dd63e0e5c2fe0 467 Gene3D G3DSA:3.90.700.10 253 392 1.8E-21 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 Gene3D G3DSA:3.30.70.20 5 54 2.3E-22 T 06-07-2017 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 Gene3D G3DSA:3.30.70.20 156 187 2.3E-22 T 06-07-2017 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 Gene3D G3DSA:3.30.70.20 88 155 4.6E-10 T 06-07-2017 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 Pfam PF13247 4Fe-4S dicluster domain 47 97 1.4E-7 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 SUPERFAMILY SSF54862 136 183 9.42E-42 T 06-07-2017 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 SUPERFAMILY SSF54862 2 101 9.42E-42 T 06-07-2017 LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS05150 3e822bc09b41bdb3e02bcf7bf7add71d 202 Gene3D G3DSA:3.30.70.20 55 87 4.2E-16 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 Gene3D G3DSA:1.20.1250.20 7 190 1.3E-25 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 SUPERFAMILY SSF103473 465 490 3.53E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 SUPERFAMILY SSF103473 3 189 3.53E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 SUPERFAMILY SSF103473 242 413 3.53E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 7.4E-9 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 7.4E-9 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 7.4E-9 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 7.4E-9 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 Gene3D G3DSA:1.20.1250.20 254 424 3.2E-14 T 06-07-2017 LFZ55_RS12125 2ed56dc5827cd3b8681a7390aeafbaa8 495 Pfam PF07690 Major Facilitator Superfamily 12 403 1.5E-41 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 117 2.0E-10 T 06-07-2017 IPR029095 NarX-like, N-terminal LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 Pfam PF00672 HAMP domain 160 224 7.9E-11 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 SMART SM00387 494 587 2.2E-13 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 SMART SM00304 176 228 1.8E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 Gene3D G3DSA:3.30.565.10 449 583 2.0E-12 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 SUPERFAMILY SSF55874 466 583 7.33E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 PIRSF PIRSF003167 1 597 7.0E-194 T 06-07-2017 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 583 4.4E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 SUPERFAMILY SSF158472 177 225 8.63E-6 T 06-07-2017 LFZ55_RS10925 ece6b48501625ec2e8400aa7c11788df 598 Pfam PF07730 Histidine kinase 390 453 2.3E-18 T 06-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 Gene3D G3DSA:3.30.950.10 121 236 1.2E-41 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 SUPERFAMILY SSF53790 12 232 4.58E-82 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 1.0E-113 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 Gene3D G3DSA:3.40.1010.10 13 120 2.6E-16 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 06-07-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 PIRSF PIRSF005917 1 287 2.1E-106 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.07 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS02895 a6c38c08f82cf7752fbba62a901779e0 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 1.4E-28 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 SUPERFAMILY SSF88697 187 259 1.86E-11 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 SUPERFAMILY SSF53098 24 202 6.07E-38 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 SMART SM00479 23 198 1.0E-34 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 Gene3D G3DSA:3.30.420.10 17 187 3.3E-35 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 Pfam PF00929 Exonuclease 25 188 8.0E-18 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 189 263 2.6E-22 T 06-07-2017 LFZ55_RS16255 5d623025ade8f6a01a3eb2496c3054aa 292 Gene3D G3DSA:3.10.480.10 188 244 1.4E-6 T 06-07-2017 LFZ55_RS10375 29140d01e3d4ad91e1306a3d0c1ac7f2 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 7.9E-112 T 06-07-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LFZ55_RS10375 29140d01e3d4ad91e1306a3d0c1ac7f2 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 7.7E-147 T 06-07-2017 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 LFZ55_RS00330 c70de07c973c04a4fe1fddffc63c127b 166 Gene3D G3DSA:3.40.640.10 1 36 6.9E-4 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS00330 c70de07c973c04a4fe1fddffc63c127b 166 Pfam PF03841 L-seryl-tRNA selenium transferase 1 81 5.7E-7 T 06-07-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS00330 c70de07c973c04a4fe1fddffc63c127b 166 SUPERFAMILY SSF53383 1 162 6.03E-11 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 SUPERFAMILY SSF100950 32 237 2.48E-74 T 06-07-2017 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 Gene3D G3DSA:3.40.1080.10 20 237 3.7E-106 T 06-07-2017 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 43 507 2.9E-266 T 06-07-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 PIRSF PIRSF009451 1 509 1.2E-265 T 06-07-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 SUPERFAMILY SSF100950 241 507 3.11E-62 T 06-07-2017 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 Gene3D G3DSA:3.40.810.20 241 480 5.8E-79 T 06-07-2017 LFZ55_RS17465 051b87e2276ee749f937b270026b3110 509 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 29 509 3.5E-243 T 06-07-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 LFZ55_RS18685 0ad3c50777790395951ec62dc65e7e54 247 SMART SM00862 25 99 0.0027 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS18685 0ad3c50777790395951ec62dc65e7e54 247 Gene3D G3DSA:1.10.10.10 12 100 2.0E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18685 0ad3c50777790395951ec62dc65e7e54 247 SUPERFAMILY SSF46894 7 98 7.37E-8 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS14815 f1ff833e6fdb4cb4fb7413fe6056004d 397 SUPERFAMILY SSF103473 12 392 1.31E-31 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14815 f1ff833e6fdb4cb4fb7413fe6056004d 397 Gene3D G3DSA:1.20.1250.20 218 392 9.4E-9 T 06-07-2017 LFZ55_RS14815 f1ff833e6fdb4cb4fb7413fe6056004d 397 Gene3D G3DSA:1.20.1250.20 14 185 7.7E-12 T 06-07-2017 LFZ55_RS14815 f1ff833e6fdb4cb4fb7413fe6056004d 397 Pfam PF07690 Major Facilitator Superfamily 15 323 3.6E-17 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 SUPERFAMILY SSF46689 4 56 5.95E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.4E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.4E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 SUPERFAMILY SSF46689 57 106 2.15E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 Gene3D G3DSA:1.10.10.60 1 57 5.2E-23 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 SMART SM00342 21 104 2.9E-34 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 Gene3D G3DSA:1.10.10.60 58 106 4.4E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 Pfam PF12833 Helix-turn-helix domain 27 106 5.1E-24 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22350 295ab187bcf1acc61b959cbae49ea38b 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04865 bd93799a86dee0c74291cca4f7080948 420 SUPERFAMILY SSF142764 4 418 1.7E-128 T 06-07-2017 LFZ55_RS04865 bd93799a86dee0c74291cca4f7080948 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 253 411 8.2E-40 T 06-07-2017 IPR031475 Putative nucleotide-binding C-terminal domain LFZ55_RS04865 bd93799a86dee0c74291cca4f7080948 420 Pfam PF07005 Putative sugar-binding N-terminal domain 4 229 1.0E-68 T 06-07-2017 IPR010737 Putative sugar-binding, N-terminal domain LFZ55_RS18660 1cf5fea569b595773041cd3b6f7f7fb6 119 Pfam PF13698 Domain of unknown function (DUF4156) 19 117 5.9E-34 T 06-07-2017 IPR025294 Protein of unknown function DUF4156 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 87 170 3.4E-28 T 06-07-2017 IPR013856 Peptidase M4 domain GO:0004222 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 Gene3D G3DSA:1.10.390.10 175 340 2.6E-49 T 06-07-2017 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 173 340 9.4E-47 T 06-07-2017 IPR001570 Peptidase M4, C-terminal GO:0004222 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 125 145 1.7E-29 T 06-07-2017 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 182 193 1.7E-29 T 06-07-2017 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 161 177 1.7E-29 T 06-07-2017 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 263 279 1.7E-29 T 06-07-2017 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 Gene3D G3DSA:3.10.170.10 57 174 6.4E-43 T 06-07-2017 IPR013856 Peptidase M4 domain GO:0004222 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 SUPERFAMILY SSF55486 63 340 2.56E-79 T 06-07-2017 LFZ55_RS06305 0a4b5aecbb461a1dffc2e43f6ea343db 341 Pfam PF16485 Protealysin propeptide 7 45 3.8E-18 T 06-07-2017 IPR032475 Protealysin, N-terminal propeptide LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 SMART SM00895 99 227 4.0E-17 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 SUPERFAMILY SSF46785 6 76 4.2E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 Gene3D G3DSA:1.10.10.10 7 76 2.4E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 SUPERFAMILY SSF48008 95 234 2.07E-20 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 Pfam PF07729 FCD domain 99 226 1.2E-17 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 Gene3D G3DSA:1.20.120.530 95 238 4.2E-18 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS19600 d17a68759aac9392a32210ddb7ffbee7 254 SMART SM00345 15 74 3.0E-29 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 SUPERFAMILY SSF53955 94 207 2.02E-44 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 SUPERFAMILY SSF53955 23 65 2.02E-44 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:1.10.530.10 33 52 2.9E-7 T 06-07-2017 LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:1.10.530.10 154 191 2.9E-7 T 06-07-2017 LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:3.30.20.10 114 153 1.8E-13 T 06-07-2017 LFZ55_RS06560 c94128691c7e5ce2ce57240456a46aff 208 Pfam PF00182 Chitinase class I 109 184 7.5E-9 T 06-07-2017 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 SUPERFAMILY SSF53955 94 207 2.02E-44 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 SUPERFAMILY SSF53955 23 65 2.02E-44 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:1.10.530.10 33 52 2.9E-7 T 06-07-2017 LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:1.10.530.10 154 191 2.9E-7 T 06-07-2017 LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 Gene3D G3DSA:3.30.20.10 114 153 1.8E-13 T 06-07-2017 LFZ55_RS06685 c94128691c7e5ce2ce57240456a46aff 208 Pfam PF00182 Chitinase class I 109 184 7.5E-9 T 06-07-2017 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 1.2E-47 T 06-07-2017 IPR012660 Thioesterase, putative LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 4.7E-49 T 06-07-2017 IPR012660 Thioesterase, putative LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 Gene3D G3DSA:3.40.630.30 24 161 1.4E-25 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 SUPERFAMILY SSF54637 171 313 4.98E-39 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 SUPERFAMILY SSF55729 15 162 1.89E-29 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 Gene3D G3DSA:3.10.129.10 162 315 3.8E-63 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS23325 26a20b93888a3bd692d4f9fc25499f7f 329 Pfam PF00583 Acetyltransferase (GNAT) family 66 138 1.7E-12 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS00655 df7da93ca11a8d9cfaf1265adda39f86 337 SUPERFAMILY SSF53448 28 295 5.62E-63 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS00655 df7da93ca11a8d9cfaf1265adda39f86 337 Pfam PF01501 Glycosyl transferase family 8 28 275 2.4E-64 T 06-07-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 LFZ55_RS00655 df7da93ca11a8d9cfaf1265adda39f86 337 Pfam PF08437 Glycosyl transferase family 8 C-terminal 277 333 1.9E-22 T 06-07-2017 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 LFZ55_RS00655 df7da93ca11a8d9cfaf1265adda39f86 337 Gene3D G3DSA:3.90.550.10 27 296 5.5E-62 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08100 6b178045979f4baab9e29b3bf7a2f6b5 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 4.0E-45 T 06-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LFZ55_RS08100 6b178045979f4baab9e29b3bf7a2f6b5 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.646 T 06-07-2017 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 LFZ55_RS08100 6b178045979f4baab9e29b3bf7a2f6b5 94 Gene3D G3DSA:2.40.240.10 1 93 4.1E-35 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS08100 6b178045979f4baab9e29b3bf7a2f6b5 94 SUPERFAMILY SSF50715 1 93 4.53E-31 T 06-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS08100 6b178045979f4baab9e29b3bf7a2f6b5 94 Pfam PF01386 Ribosomal L25p family 4 91 2.1E-24 T 06-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 Pfam PF00005 ABC transporter 24 178 1.5E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 219 2.9E-108 T 06-07-2017 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 SMART SM00382 33 216 3.3E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 SUPERFAMILY SSF52540 2 222 1.17E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22205 c43da9eef81e9ff54213fa56538d11c7 226 Gene3D G3DSA:3.40.50.300 1 222 2.0E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11960 4e089db888bd952abed742ffb57d2820 131 Gene3D G3DSA:3.40.50.1390 5 60 5.9E-14 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS11960 4e089db888bd952abed742ffb57d2820 131 Pfam PF00239 Resolvase, N terminal domain 4 62 2.2E-9 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS11960 4e089db888bd952abed742ffb57d2820 131 SMART SM00857 4 130 0.0058 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS11960 4e089db888bd952abed742ffb57d2820 131 SUPERFAMILY SSF53041 3 60 4.32E-12 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 SMART SM00388 236 302 2.2E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 6.5E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 4.9E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 4.9E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Gene3D G3DSA:1.10.287.130 229 298 2.3E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 1.2E-4 T 06-07-2017 IPR013727 Two-component sensor kinase, N-terminal LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 SUPERFAMILY SSF47384 219 301 5.69E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 444 4.0E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Gene3D G3DSA:1.20.5.1040 2 84 1.6E-25 T 06-07-2017 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Gene3D G3DSA:1.20.5.1040 101 185 4.0E-33 T 06-07-2017 LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 SUPERFAMILY SSF55874 291 448 2.62E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 SMART SM00387 348 449 7.5E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03360 7e0ac26cc9dc67b97b3c1d1c921a214e 449 Gene3D G3DSA:3.30.565.10 310 448 1.2E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 SMART SM00089 431 519 4.7E-4 T 06-07-2017 IPR022409 PKD/Chitinase domain LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 Gene3D G3DSA:2.60.40.670 436 517 3.5E-7 T 06-07-2017 IPR000601 PKD domain LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 Gene3D G3DSA:1.10.530.10 86 154 2.2E-61 T 06-07-2017 LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 Gene3D G3DSA:1.10.530.10 210 346 2.2E-61 T 06-07-2017 LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 SUPERFAMILY SSF53955 87 347 1.52E-61 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 Pfam PF00182 Chitinase class I 107 332 1.5E-34 T 06-07-2017 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 LFZ55_RS19225 2d9eb40924f1aa27030a952e2ef536ef 587 SUPERFAMILY SSF49299 427 518 8.83E-8 T 06-07-2017 IPR000601 PKD domain LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 06-07-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 9.7E-127 T 06-07-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.0E-39 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.051 T 06-07-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 SUPERFAMILY SSF53167 3 234 3.67E-93 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS20435 b753eee51ac58fe6ae53f4ad46dc9a88 239 Gene3D G3DSA:3.40.50.1580 10 233 9.4E-83 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 SUPERFAMILY SSF51182 42 156 1.14E-7 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 Gene3D G3DSA:1.10.10.60 252 302 1.1E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 1.1E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 1.1E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 SUPERFAMILY SSF46689 251 299 1.84E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 Gene3D G3DSA:1.10.10.60 200 251 1.1E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 SMART SM00342 215 298 2.5E-26 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 Gene3D G3DSA:2.60.120.10 36 107 1.9E-7 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 SUPERFAMILY SSF47454 137 194 2.48E-11 T 06-07-2017 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 LFZ55_RS22110 648128674ff7edacde9e3742ba7c9f73 310 Pfam PF12833 Helix-turn-helix domain 222 299 4.5E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 Gene3D G3DSA:3.90.1260.10 175 372 7.8E-64 T 06-07-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 SUPERFAMILY SSF69864 190 443 1.7E-80 T 06-07-2017 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 Gene3D G3DSA:1.10.287.400 377 439 1.4E-34 T 06-07-2017 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 06-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 1.1E-169 T 06-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 77.043 T 06-07-2017 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 Pfam PF00764 Arginosuccinate synthase 16 410 3.2E-57 T 06-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 Gene3D G3DSA:3.40.50.620 4 174 4.1E-44 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 06-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS02770 ff8e9d5f761ba52ec672c64ff9234785 447 SUPERFAMILY SSF52402 3 186 1.68E-35 T 06-07-2017 LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 8.5E-42 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Gene3D G3DSA:3.40.50.300 2 208 6.8E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 68.814 T 06-07-2017 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 SMART SM00490 255 336 1.4E-27 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Pfam PF03880 DbpA RNA binding domain 384 454 5.1E-22 T 06-07-2017 IPR005580 DbpA, RNA-binding domain LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 1.4E-26 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 Gene3D G3DSA:3.40.50.300 214 372 5.5E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 SUPERFAMILY SSF52540 72 350 2.31E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 SMART SM00487 22 219 6.3E-53 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS11610 af2b8fe2895d301aa910d2f76b16c1ff 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LFZ55_RS21780 27e7fe2763bfeb89de6e042915fafc4a 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.054 T 06-07-2017 IPR022894 Oligoribonuclease GO:0016788 LFZ55_RS21780 27e7fe2763bfeb89de6e042915fafc4a 181 SMART SM00479 7 180 7.4E-23 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS21780 27e7fe2763bfeb89de6e042915fafc4a 181 SUPERFAMILY SSF53098 3 180 1.28E-48 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS21780 27e7fe2763bfeb89de6e042915fafc4a 181 Gene3D G3DSA:3.30.420.10 4 180 1.8E-71 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS21780 27e7fe2763bfeb89de6e042915fafc4a 181 Pfam PF00929 Exonuclease 9 170 1.0E-35 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS08045 f6bad5552be940f7442e839f58ffc92f 503 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 9 318 9.8E-87 T 06-07-2017 IPR018003 Insecticidal toxin complex/plasmid virulence protein LFZ55_RS14905 1b2fdb29575d9547bfd28f6f444fc692 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 2.9E-9 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS14905 1b2fdb29575d9547bfd28f6f444fc692 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 51 6.0E-9 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS03915 92a1fa8c38ea37cab70a82c247d212cf 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 2.0E-25 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS03915 92a1fa8c38ea37cab70a82c247d212cf 147 SUPERFAMILY SSF55804 1 145 3.4E-31 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS03915 92a1fa8c38ea37cab70a82c247d212cf 147 Gene3D G3DSA:3.40.930.10 1 146 1.4E-46 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 2.4E-138 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 SUPERFAMILY SSF103473 15 212 2.75E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 SUPERFAMILY SSF103473 257 488 2.75E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 Gene3D G3DSA:1.20.1250.20 21 202 9.4E-18 T 06-07-2017 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 Gene3D G3DSA:1.20.1250.20 275 485 1.5E-9 T 06-07-2017 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.559 T 06-07-2017 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS12955 1a774cf35ffdefe958b1d7cb78d426e3 501 Pfam PF00854 POT family 89 445 1.2E-90 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SMART SM00487 16 286 0.002 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 Gene3D G3DSA:3.40.50.300 190 233 3.8E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 Gene3D G3DSA:3.40.50.300 4 116 3.8E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SMART SM00491 474 603 3.8E-55 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 Pfam PF13307 Helicase C-terminal domain 459 616 1.7E-34 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 Gene3D G3DSA:3.40.50.300 449 597 3.0E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 2.6E-5 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SUPERFAMILY SSF52540 573 597 2.32E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SUPERFAMILY SSF52540 41 88 2.32E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SUPERFAMILY SSF52540 477 542 2.32E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10430 d5a509a46693f8c78ac47774d6b1bcf2 636 SUPERFAMILY SSF52540 13 232 6.73E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03995 6d951c64d2c9b7d5753115ad4be695e1 211 Pfam PF01810 LysE type translocator 14 201 2.0E-55 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS03995 6d951c64d2c9b7d5753115ad4be695e1 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.728 T 06-07-2017 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 LFZ55_RS03995 6d951c64d2c9b7d5753115ad4be695e1 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 1.3E-71 T 06-07-2017 IPR004777 L-lysine exporter/arginine exporter GO:0016021 LFZ55_RS10630 6bd8f9cc53294f423aafbc4e82748343 519 Gene3D G3DSA:3.30.1120.10 428 514 2.8E-19 T 06-07-2017 LFZ55_RS10630 6bd8f9cc53294f423aafbc4e82748343 519 Gene3D G3DSA:3.40.720.10 44 417 8.6E-83 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS10630 6bd8f9cc53294f423aafbc4e82748343 519 SUPERFAMILY SSF53649 44 498 1.28E-96 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS10630 6bd8f9cc53294f423aafbc4e82748343 519 Pfam PF00884 Sulfatase 46 397 2.2E-53 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS07985 c5b52141acbf4a515348f792a3352b48 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.2E-78 T 06-07-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 LFZ55_RS07985 c5b52141acbf4a515348f792a3352b48 185 SUPERFAMILY SSF52833 46 178 4.03E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07985 c5b52141acbf4a515348f792a3352b48 185 Gene3D G3DSA:3.40.30.10 10 178 1.2E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07985 c5b52141acbf4a515348f792a3352b48 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS07985 c5b52141acbf4a515348f792a3352b48 185 Pfam PF08534 Redoxin 41 170 1.3E-22 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 LFZ55_RS00150 c5b52141acbf4a515348f792a3352b48 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.2E-78 T 06-07-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 LFZ55_RS00150 c5b52141acbf4a515348f792a3352b48 185 SUPERFAMILY SSF52833 46 178 4.03E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS00150 c5b52141acbf4a515348f792a3352b48 185 Gene3D G3DSA:3.40.30.10 10 178 1.2E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS00150 c5b52141acbf4a515348f792a3352b48 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS00150 c5b52141acbf4a515348f792a3352b48 185 Pfam PF08534 Redoxin 41 170 1.3E-22 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 LFZ55_RS24115 e5a191548aab46adbb9799c32d757671 319 SUPERFAMILY SSF161098 28 303 3.79E-33 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24115 e5a191548aab46adbb9799c32d757671 319 Gene3D G3DSA:1.10.3720.10 26 316 1.8E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24115 e5a191548aab46adbb9799c32d757671 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 17 311 3.3E-93 T 06-07-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 LFZ55_RS24115 e5a191548aab46adbb9799c32d757671 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 2.7E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 SUPERFAMILY SSF55103 275 567 5.01E-118 T 06-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 PIRSF PIRSF000101 4 569 0.0 T 06-07-2017 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Pfam PF01565 FAD binding domain 47 166 2.3E-9 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Gene3D G3DSA:3.30.43.10 4 104 9.6E-9 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Gene3D G3DSA:3.30.1370.20 435 519 8.2E-48 T 06-07-2017 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Gene3D G3DSA:3.30.465.10 107 268 1.5E-84 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Gene3D G3DSA:3.30.70.610 269 342 7.0E-25 T 06-07-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Gene3D G3DSA:3.30.70.610 377 434 5.3E-22 T 06-07-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 1.1E-148 T 06-07-2017 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LFZ55_RS08435 a0dea7a8b3f28ef7609422805587087b 576 SUPERFAMILY SSF56176 10 270 2.62E-74 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.166 T 06-07-2017 IPR005215 Trigger factor GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Gene3D G3DSA:3.10.50.40 151 215 1.3E-9 T 06-07-2017 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 3.8E-41 T 06-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 PIRSF PIRSF003095 1 432 2.2E-130 T 06-07-2017 IPR005215 Trigger factor GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 SUPERFAMILY SSF102735 1 131 1.57E-39 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 5.0E-143 T 06-07-2017 IPR005215 Trigger factor GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Gene3D G3DSA:3.30.70.1050 1 117 1.5E-39 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 232 2.2E-14 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 4.2E-42 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 Gene3D G3DSA:1.10.3120.10 216 388 1.6E-62 T 06-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 SUPERFAMILY SSF54534 96 241 1.26E-37 T 06-07-2017 LFZ55_RS18230 5753696aa6587f06091941f2648909c6 432 SUPERFAMILY SSF109998 248 429 3.79E-48 T 06-07-2017 IPR027304 Trigger factor/SurA domain LFZ55_RS01635 342323850e8a062db51d2a450a76ce95 256 SUPERFAMILY SSF53474 3 250 3.11E-46 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS01635 342323850e8a062db51d2a450a76ce95 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 6.3E-112 T 06-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 LFZ55_RS01635 342323850e8a062db51d2a450a76ce95 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.293 T 06-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 LFZ55_RS01635 342323850e8a062db51d2a450a76ce95 256 Gene3D G3DSA:3.40.50.1820 3 250 4.3E-52 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS01635 342323850e8a062db51d2a450a76ce95 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 2.2E-25 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 06-07-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 06-07-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 Gene3D G3DSA:1.20.1300.10 3 129 3.0E-43 T 06-07-2017 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 PIRSF PIRSF000178 1 129 2.7E-32 T 06-07-2017 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 SUPERFAMILY SSF81343 2 129 4.58E-36 T 06-07-2017 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 4.3E-40 T 06-07-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16930 b042bc64f4b90d9dc03bcb59f7bce867 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 2.2E-30 T 06-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16480 9a81fb9c427a291a33a5560374d871aa 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 2.4E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16480 9a81fb9c427a291a33a5560374d871aa 219 Gene3D G3DSA:1.10.3720.10 13 217 2.3E-49 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16480 9a81fb9c427a291a33a5560374d871aa 219 SUPERFAMILY SSF161098 13 202 2.62E-45 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16480 9a81fb9c427a291a33a5560374d871aa 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 4.0E-31 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS16585 232c8555420817cef783b34e41069caa 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.654 T 06-07-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 LFZ55_RS16585 232c8555420817cef783b34e41069caa 161 Gene3D G3DSA:3.30.70.640 3 157 4.5E-70 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 LFZ55_RS16585 232c8555420817cef783b34e41069caa 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.1E-73 T 06-07-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 LFZ55_RS16585 232c8555420817cef783b34e41069caa 161 SUPERFAMILY SSF55040 11 155 1.57E-61 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 LFZ55_RS16585 232c8555420817cef783b34e41069caa 161 Pfam PF01967 MoaC family 15 150 5.6E-55 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 LFZ55_RS06310 c424942483fbce11ed123d1e3b3746e3 454 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.311 T 06-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS06310 c424942483fbce11ed123d1e3b3746e3 454 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 4.7E-32 T 06-07-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 LFZ55_RS06310 c424942483fbce11ed123d1e3b3746e3 454 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.9E-104 T 06-07-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 LFZ55_RS06310 c424942483fbce11ed123d1e3b3746e3 454 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 1.7E-140 T 06-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.1E-21 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 PIRSF PIRSF002599 1 70 1.3E-13 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 SMART SM00357 6 70 6.5E-10 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 PRINTS PR00050 Cold shock protein signature 43 61 6.7E-5 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 PRINTS PR00050 Cold shock protein signature 28 37 6.7E-5 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 PRINTS PR00050 Cold shock protein signature 7 22 6.7E-5 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 Gene3D G3DSA:2.40.50.140 5 69 1.3E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS14020 17eeb0c86ae43c12d684f5c23f142ca4 70 SUPERFAMILY SSF50249 4 69 1.25E-12 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 443 9.4E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SUPERFAMILY SSF50156 249 358 1.17E-21 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 5.8E-29 T 06-07-2017 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.4E-58 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SUPERFAMILY SSF50156 386 452 3.68E-15 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Gene3D G3DSA:2.40.10.10 156 268 2.9E-43 T 06-07-2017 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 1.4E-160 T 06-07-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Gene3D G3DSA:2.30.42.10 269 364 2.0E-29 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Gene3D G3DSA:2.30.42.10 387 452 8.7E-17 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Pfam PF13180 PDZ domain 278 358 2.7E-17 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 Gene3D G3DSA:2.40.10.10 39 154 1.7E-34 T 06-07-2017 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SMART SM00228 267 349 1.9E-12 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SMART SM00228 374 447 1.5E-8 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SUPERFAMILY SSF50494 19 60 7.87E-62 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS02470 8f6e94c4dbfd37c5b1710e5885c707c1 455 SUPERFAMILY SSF50494 89 276 7.87E-62 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 SUPERFAMILY SSF52540 174 285 4.87E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Pfam PF05127 Helicase 197 337 8.9E-38 T 06-07-2017 IPR007807 Helicase domain Reactome: R-HSA-6790901 LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Pfam PF08351 Domain of unknown function (DUF1726) 66 150 9.8E-6 T 06-07-2017 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Pfam PF13718 GNAT acetyltransferase 2 370 477 3.6E-16 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Pfam PF17176 tRNA-binding domain 537 654 2.9E-39 T 06-07-2017 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Gene3D G3DSA:3.40.630.30 375 417 3.0E-12 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Gene3D G3DSA:3.40.630.30 455 513 3.0E-12 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 SUPERFAMILY SSF55729 370 418 1.49E-12 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 SUPERFAMILY SSF55729 454 513 1.49E-12 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06810 c32cbdad911a799b15ab72fb4f99b4ce 672 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 652 47.693 T 06-07-2017 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 Gene3D G3DSA:1.10.10.60 80 140 8.8E-22 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 SUPERFAMILY SSF46689 79 128 7.62E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 SUPERFAMILY SSF46689 27 76 1.34E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 SMART SM00342 42 125 3.0E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 Pfam PF12833 Helix-turn-helix domain 49 125 1.1E-17 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 Gene3D G3DSA:1.10.10.60 21 79 6.3E-25 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12570 5d1a12ee41110d8ff8f75bb3f8ddc400 144 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 79 121 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS11590 40e111c5b0eb6d5406ed224c67a66a52 187 SMART SM00463 85 169 1.5E-15 T 06-07-2017 IPR002625 Smr domain LFZ55_RS11590 40e111c5b0eb6d5406ed224c67a66a52 187 SUPERFAMILY SSF160443 87 169 3.66E-11 T 06-07-2017 IPR002625 Smr domain LFZ55_RS11590 40e111c5b0eb6d5406ed224c67a66a52 187 Pfam PF01713 Smr domain 97 169 8.0E-18 T 06-07-2017 IPR002625 Smr domain LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.274 T 06-07-2017 IPR007551 Protein of unknown function DUF520 LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 SUPERFAMILY SSF89963 91 163 3.66E-29 T 06-07-2017 IPR007551 Protein of unknown function DUF520 LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.2E-64 T 06-07-2017 IPR007551 Protein of unknown function DUF520 LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 SUPERFAMILY SSF89963 2 89 5.23E-30 T 06-07-2017 IPR007551 Protein of unknown function DUF520 LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 Gene3D G3DSA:3.30.70.990 9 97 1.2E-35 T 06-07-2017 LFZ55_RS18295 6bd72819a4347c8d8af9342ac43cf0c3 163 Gene3D G3DSA:3.30.70.860 98 163 2.8E-35 T 06-07-2017 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 5.0E-295 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.387 T 06-07-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 SUPERFAMILY SSF51621 6 883 0.0 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 06-07-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 06-07-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.7E-68 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LFZ55_RS22975 0eb89db28fbaa365693e6d82b9a851f3 883 Gene3D G3DSA:1.20.1440.90 273 388 3.8E-32 T 06-07-2017 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.3E-77 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 PIRSF PIRSF002560 1 157 8.3E-71 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 Gene3D G3DSA:1.20.1260.10 1 155 3.6E-65 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.3E-81 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 Pfam PF00210 Ferritin-like domain 8 143 3.9E-39 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LFZ55_RS02020 baebd09479b3449b20f5b88b0d70f04c 158 SUPERFAMILY SSF47240 1 154 1.98E-53 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 SUPERFAMILY SSF56784 1 247 1.08E-63 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 Gene3D G3DSA:3.40.50.10410 83 173 3.1E-31 T 06-07-2017 IPR023215 Nitrophenylphosphatase-like domain LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 Gene3D G3DSA:3.40.50.1000 1 79 1.5E-38 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 Gene3D G3DSA:3.40.50.1000 174 247 1.5E-38 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 9.0E-64 T 06-07-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 4.1E-22 T 06-07-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA LFZ55_RS17200 2b21382b1da1762937c44dec881f3a42 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.5E-19 T 06-07-2017 LFZ55_RS14415 9d68a7ec04fb2719336b8c73357f7564 140 Gene3D G3DSA:1.20.58.300 1 114 2.0E-11 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LFZ55_RS14415 9d68a7ec04fb2719336b8c73357f7564 140 Pfam PF05130 FlgN protein 1 129 8.3E-20 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LFZ55_RS14415 9d68a7ec04fb2719336b8c73357f7564 140 SUPERFAMILY SSF140566 1 113 3.79E-15 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 Pfam PF12833 Helix-turn-helix domain 191 270 3.3E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 SUPERFAMILY SSF46689 222 272 2.64E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 7.4E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 7.4E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 SMART SM00342 185 268 7.8E-32 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 Gene3D G3DSA:1.10.10.60 166 221 2.5E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22985 2c58224c021971181fdf271e7fdfc1a5 278 Gene3D G3DSA:1.10.10.60 222 272 9.9E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10030 b23242b2fe029f6c8334769c233bbbf2 96 Pfam PF07130 YebG protein 1 74 2.0E-33 T 06-07-2017 IPR009813 Uncharacterised protein family YebG LFZ55_RS10030 b23242b2fe029f6c8334769c233bbbf2 96 Gene3D G3DSA:1.10.10.710 20 87 2.3E-26 T 06-07-2017 IPR009813 Uncharacterised protein family YebG LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 SUPERFAMILY SSF53187 6 82 1.26E-53 T 06-07-2017 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 SUPERFAMILY SSF53187 172 352 1.26E-53 T 06-07-2017 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 Gene3D G3DSA:3.40.630.10 169 353 4.7E-68 T 06-07-2017 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 Gene3D G3DSA:3.40.630.10 6 73 4.7E-68 T 06-07-2017 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 SUPERFAMILY SSF101821 72 180 1.27E-26 T 06-07-2017 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 Gene3D G3DSA:2.40.30.40 74 162 9.4E-29 T 06-07-2017 IPR023367 Peptidase M42, domain 2 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 PIRSF PIRSF001123 3 358 2.1E-94 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS11910 785e0c020b0ef3e0505811633598ba01 372 Pfam PF05343 M42 glutamyl aminopeptidase 46 346 7.5E-94 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 SUPERFAMILY SSF47005 106 151 1.44E-11 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 404 8.5E-82 T 06-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Gene3D G3DSA:4.10.320.10 114 152 4.7E-20 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Gene3D G3DSA:2.40.50.100 1 96 4.1E-26 T 06-07-2017 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Pfam PF00364 Biotin-requiring enzyme 5 76 3.0E-17 T 06-07-2017 IPR000089 Biotin/lipoyl attachment LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 SUPERFAMILY SSF51230 2 95 2.75E-24 T 06-07-2017 IPR011053 Single hybrid motif LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Gene3D G3DSA:3.30.559.10 166 404 1.6E-91 T 06-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 Pfam PF02817 e3 binding domain 114 147 2.3E-12 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 406 2.9E-194 T 06-07-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 LFZ55_RS16905 d18a7d56609e5695744d9b53a572301c 406 SUPERFAMILY SSF52777 176 405 5.34E-90 T 06-07-2017 LFZ55_RS14550 1a46e90af3ef49c37640520a9f7369d8 108 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 1.1E-45 T 06-07-2017 IPR014491 Curli production protein CsgC LFZ55_RS14550 1a46e90af3ef49c37640520a9f7369d8 108 PIRSF PIRSF018100 1 108 7.2E-66 T 06-07-2017 IPR014491 Curli production protein CsgC LFZ55_RS17965 9b24060a8c5fcf74f4373eff0e6bef1a 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 5.9E-23 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS17965 9b24060a8c5fcf74f4373eff0e6bef1a 159 Gene3D G3DSA:3.90.960.10 1 157 2.1E-61 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS17965 9b24060a8c5fcf74f4373eff0e6bef1a 159 SUPERFAMILY SSF55826 2 155 1.96E-45 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS17965 9b24060a8c5fcf74f4373eff0e6bef1a 159 PIRSF PIRSF006181 1 159 1.7E-58 T 06-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LFZ55_RS17965 9b24060a8c5fcf74f4373eff0e6bef1a 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.1E-56 T 06-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 06-07-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.7E-30 T 06-07-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.99 T 06-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 06-07-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 06-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.160.20 10 72 7.0E-31 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 06-07-2017 LFZ55_RS02125 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.230.10 76 159 1.1E-33 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS02015 8c26fe5884a86c9549792ec5b7763f6a 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 8.2E-15 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 Gene3D G3DSA:3.50.7.10 189 368 6.0E-99 T 06-07-2017 IPR027409 GroEL-like apical domain LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 Gene3D G3DSA:1.10.560.10 3 188 1.5E-47 T 06-07-2017 IPR027413 GroEL-like equatorial domain LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.585 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.9E-257 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 06-07-2017 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 06-07-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 7.9E-95 T 06-07-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 SUPERFAMILY SSF52029 185 376 3.14E-83 T 06-07-2017 IPR027409 GroEL-like apical domain LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 SUPERFAMILY SSF48592 406 521 7.48E-78 T 06-07-2017 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 SUPERFAMILY SSF48592 7 134 7.48E-78 T 06-07-2017 LFZ55_RS21875 0f99dd449a94d67e7e0cdede8efd3864 548 Gene3D G3DSA:1.10.560.10 369 518 4.4E-40 T 06-07-2017 IPR027413 GroEL-like equatorial domain LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 Pfam PF03275 UDP-galactopyranose mutase 150 349 3.0E-74 T 06-07-2017 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 SUPERFAMILY SSF51971 334 366 1.41E-46 T 06-07-2017 LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 SUPERFAMILY SSF51971 4 265 1.41E-46 T 06-07-2017 LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 5 364 1.0E-95 T 06-07-2017 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 Gene3D G3DSA:3.40.50.720 5 82 3.7E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 Gene3D G3DSA:3.40.50.720 185 257 3.7E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 Gene3D G3DSA:3.40.50.720 324 364 3.7E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 75 1.3E-17 T 06-07-2017 LFZ55_RS17000 344b673f9318382df184ffa1c09857dd 383 SUPERFAMILY SSF54373 248 316 1.57E-24 T 06-07-2017 LFZ55_RS18465 7ee6e4c1e126f43f3c6f8d1e4324b9b0 390 Pfam PF07690 Major Facilitator Superfamily 8 328 3.6E-34 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS18465 7ee6e4c1e126f43f3c6f8d1e4324b9b0 390 Gene3D G3DSA:1.20.1250.20 3 186 2.1E-24 T 06-07-2017 LFZ55_RS18465 7ee6e4c1e126f43f3c6f8d1e4324b9b0 390 Gene3D G3DSA:1.20.1250.20 202 379 3.5E-9 T 06-07-2017 LFZ55_RS18465 7ee6e4c1e126f43f3c6f8d1e4324b9b0 390 SUPERFAMILY SSF103473 3 380 5.49E-46 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 SUPERFAMILY SSF46689 12 86 3.58E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 Gene3D G3DSA:3.40.50.10490 120 274 1.7E-37 T 06-07-2017 LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 8.6E-23 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 SUPERFAMILY SSF53697 112 283 4.06E-39 T 06-07-2017 LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 Gene3D G3DSA:1.10.10.10 12 86 3.5E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14860 19fb92219212083abc8595ad7e74bc9c 293 Pfam PF01380 SIS domain 140 268 2.8E-21 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 149 4.0E-27 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 PRINTS PR00969 Pili chaperone signature 131 146 4.5E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 PRINTS PR00969 Pili chaperone signature 99 116 4.5E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 PRINTS PR00969 Pili chaperone signature 167 182 4.5E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 PRINTS PR00969 Pili chaperone signature 24 33 4.5E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 PRINTS PR00969 Pili chaperone signature 70 91 4.5E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 228 5.3E-14 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 Gene3D G3DSA:2.60.40.1070 154 231 1.5E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 SUPERFAMILY SSF49354 25 149 2.62E-28 T 06-07-2017 IPR008962 PapD-like LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 SUPERFAMILY SSF49584 143 232 7.72E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS24695 777907e57fcc759c50a28f7910bdb60b 237 Gene3D G3DSA:2.60.40.360 26 146 3.4E-30 T 06-07-2017 IPR008962 PapD-like LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 Gene3D G3DSA:2.30.22.10 138 196 1.6E-23 T 06-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 Gene3D G3DSA:3.90.20.20 34 137 2.4E-32 T 06-07-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 SUPERFAMILY SSF51064 139 195 3.4E-16 T 06-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 Pfam PF01025 GrpE 35 194 6.1E-47 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.558 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 PRINTS PR00773 GrpE protein signature 173 192 4.2E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 PRINTS PR00773 GrpE protein signature 91 106 4.2E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 PRINTS PR00773 GrpE protein signature 63 79 4.2E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 PRINTS PR00773 GrpE protein signature 146 161 4.2E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LFZ55_RS05760 5b0033f7e83be0d763253d213eaf995d 197 SUPERFAMILY SSF58014 49 138 4.84E-27 T 06-07-2017 LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 SMART SM00382 277 472 2.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 SMART SM00382 29 231 4.4E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 Gene3D G3DSA:3.40.50.300 268 490 1.4E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 SUPERFAMILY SSF52540 250 483 2.91E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 Pfam PF00005 ABC transporter 269 423 2.7E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 Pfam PF00005 ABC transporter 22 169 7.8E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 Gene3D G3DSA:3.40.50.300 2 235 1.7E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24005 4e49afde5a5341eeecdb8f96b3e4ab48 501 SUPERFAMILY SSF52540 4 231 1.13E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14425 66dd7986e14905fb2c9d813ab200c446 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 1.6E-26 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS14425 66dd7986e14905fb2c9d813ab200c446 307 SUPERFAMILY SSF51735 4 136 4.32E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14425 66dd7986e14905fb2c9d813ab200c446 307 SUPERFAMILY SSF55347 126 265 8.72E-44 T 06-07-2017 LFZ55_RS14425 66dd7986e14905fb2c9d813ab200c446 307 Gene3D G3DSA:3.40.50.720 3 129 6.7E-34 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14425 66dd7986e14905fb2c9d813ab200c446 307 Gene3D G3DSA:3.30.360.10 130 305 1.6E-67 T 06-07-2017 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.3E-19 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 SUPERFAMILY SSF50249 67 130 1.37E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.822 T 06-07-2017 IPR011897 Translation elongation factor P-like, YeiP LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 SMART SM00841 133 188 3.1E-27 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 PIRSF PIRSF005901 1 190 4.7E-60 T 06-07-2017 IPR020599 Translation elongation factor P/YeiP LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 5.9E-14 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 8.2E-17 T 06-07-2017 IPR013185 Translation elongation factor, KOW-like LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Gene3D G3DSA:2.30.30.30 1 65 8.5E-16 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 SUPERFAMILY SSF50104 1 65 2.35E-11 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Gene3D G3DSA:2.40.50.140 67 131 1.3E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 Gene3D G3DSA:2.40.50.140 132 189 5.2E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 SMART SM01185 69 125 2.9E-14 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.2E-101 T 06-07-2017 IPR011897 Translation elongation factor P-like, YeiP LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 SUPERFAMILY SSF50249 132 189 7.37E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08200 e202e0a5751214a35085adc7b6ee0724 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 06-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site LFZ55_RS22130 39f9e05f1520d75fb2fcab07385d769f 547 Pfam PF00884 Sulfatase 238 527 2.7E-50 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS22130 39f9e05f1520d75fb2fcab07385d769f 547 Gene3D G3DSA:3.40.720.10 239 532 6.3E-17 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS22130 39f9e05f1520d75fb2fcab07385d769f 547 SUPERFAMILY SSF53649 239 531 1.0E-20 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS22130 39f9e05f1520d75fb2fcab07385d769f 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 4.4E-41 T 06-07-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 LFZ55_RS15535 da4b9326f386224e6c428c919328577a 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 706 0.0 T 06-07-2017 IPR010019 Integral membrane protein, YccS LFZ55_RS15535 da4b9326f386224e6c428c919328577a 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 06-07-2017 IPR010020 Integral membrane protein, YccS/YhfK LFZ55_RS15535 da4b9326f386224e6c428c919328577a 717 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 7.4E-113 T 06-07-2017 IPR032692 Integral membrane protein YccS, N-terminal LFZ55_RS15535 da4b9326f386224e6c428c919328577a 717 Pfam PF13515 Fusaric acid resistance protein-like 406 525 2.3E-24 T 06-07-2017 LFZ55_RS12090 6453c4c801626452d7e792e7025307d7 497 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS12090 6453c4c801626452d7e792e7025307d7 497 Pfam PF00324 Amino acid permease 35 476 1.8E-127 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS12090 6453c4c801626452d7e792e7025307d7 497 PIRSF PIRSF006060 23 485 7.2E-63 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 Gene3D G3DSA:1.10.287.70 157 253 2.5E-26 T 06-07-2017 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 SUPERFAMILY SSF81324 25 242 1.19E-46 T 06-07-2017 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 Gene3D G3DSA:1.20.120.350 16 139 1.4E-19 T 06-07-2017 IPR027359 Voltage-dependent channel, four helix bundle domain LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 128 154 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 157 180 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 64 87 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 90 110 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 215 241 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 18 46 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 PRINTS PR00169 Potassium channel signature 186 208 4.6E-34 T 06-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 LFZ55_RS11060 7e9b96243177c72e3d74bdbab3b69a79 278 Pfam PF00520 Ion transport protein 27 245 6.8E-28 T 06-07-2017 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Gene3D G3DSA:2.60.120.260 1 180 1.2E-54 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Gene3D G3DSA:3.20.20.80 275 589 5.3E-80 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 SUPERFAMILY SSF49785 1 181 2.55E-54 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Pfam PF00703 Glycosyl hydrolases family 2 182 272 2.1E-6 T 06-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 SUPERFAMILY SSF51445 274 590 1.03E-85 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 1.2E-17 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 399 414 1.2E-17 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 91 106 1.2E-17 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 283 297 1.2E-17 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 1.2E-17 T 06-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 12 180 4.4E-51 T 06-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Gene3D G3DSA:2.60.40.320 182 273 1.5E-20 T 06-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 274 592 1.1E-107 T 06-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 SUPERFAMILY SSF49303 182 273 2.04E-16 T 06-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 399 413 - T 06-07-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS03585 1d53e5486f9fe9fef4d7be4220cf896f 603 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 06-07-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 LFZ55_RS23435 8f0f18720ca839ca9b93e893904cd8c3 170 Pfam PF04220 Der GTPase activator (YihI) 15 166 2.9E-53 T 06-07-2017 IPR007336 Der GTPase activator LFZ55_RS23435 8f0f18720ca839ca9b93e893904cd8c3 170 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 16.267 T 06-07-2017 IPR007336 Der GTPase activator LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 SUPERFAMILY SSF48150 101 274 5.41E-43 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 241 1.4E-7 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 Gene3D G3DSA:3.30.310.20 2 112 8.1E-39 T 06-07-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 SMART SM01009 1 112 3.3E-54 T 06-07-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 SUPERFAMILY SSF55945 1 97 3.14E-30 T 06-07-2017 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 SMART SM00478 130 276 1.2E-22 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 06-07-2017 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 Gene3D G3DSA:1.10.340.30 114 229 3.4E-34 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 Pfam PF06029 AlkA N-terminal domain 2 112 1.9E-32 T 06-07-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LFZ55_RS08635 fefb3510ce35fb9ccc88bcc889b237e2 289 Gene3D G3DSA:1.10.1670.10 231 280 6.7E-20 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Pfam PF07338 Protein of unknown function (DUF1471) 118 174 5.5E-16 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 3.2E-17 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 7.5E-20 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 PIRSF PIRSF014774 1 314 4.1E-184 T 06-07-2017 IPR025539 YdgH protein LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 SUPERFAMILY SSF159871 108 177 5.62E-16 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Gene3D G3DSA:3.30.1660.10 249 314 2.9E-22 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Gene3D G3DSA:3.30.1660.10 109 174 3.2E-24 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 Gene3D G3DSA:3.30.1660.10 25 90 1.3E-23 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 SUPERFAMILY SSF159871 239 314 4.58E-18 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS12820 9976d5ebec331637a0b6c56c74300fab 314 SUPERFAMILY SSF159871 3 94 5.49E-22 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 8.4E-13 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.2E-25 T 06-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 SUPERFAMILY SSF51161 1 256 4.3E-80 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.69 T 06-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Gene3D G3DSA:1.10.166.10 1 70 7.5E-33 T 06-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 Gene3D G3DSA:2.160.10.10 89 255 2.3E-64 T 06-07-2017 LFZ55_RS19335 31ee56d10707969493445323faa521b2 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 2.4E-164 T 06-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 LFZ55_RS18370 ef7ac68ec8d06b0ca67e47fe8bee2cfd 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.234 T 06-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LFZ55_RS18370 ef7ac68ec8d06b0ca67e47fe8bee2cfd 149 Pfam PF03477 ATP cone domain 50 136 4.3E-15 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 LFZ55_RS18370 ef7ac68ec8d06b0ca67e47fe8bee2cfd 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.7E-78 T 06-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LFZ55_RS07570 2363f1ce5c37fb5f1d5ddd1d7608b35d 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 5.6E-159 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.9E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 Gene3D G3DSA:1.10.10.10 1 81 9.9E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 Gene3D G3DSA:3.40.190.10 185 261 4.5E-32 T 06-07-2017 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 SUPERFAMILY SSF53850 91 322 1.23E-46 T 06-07-2017 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 Gene3D G3DSA:3.40.190.10 92 184 1.2E-20 T 06-07-2017 LFZ55_RS11210 9d06b401bc664ab1be4f2b551e920857 324 Pfam PF03466 LysR substrate binding domain 92 292 1.3E-42 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS17605 e4beb02bc909b95b81f330eb98ae6544 335 Pfam PF01032 FecCD transport family 19 328 3.8E-90 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS17605 e4beb02bc909b95b81f330eb98ae6544 335 Gene3D G3DSA:1.10.3470.10 12 330 1.3E-96 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS17605 e4beb02bc909b95b81f330eb98ae6544 335 SUPERFAMILY SSF81345 7 328 5.1E-76 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF55326 221 428 5.23E-64 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF52317 1035 1293 7.1E-100 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.617 T 06-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 6.4E-104 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 828 966 3.4E-16 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 6.4E-26 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF109736 155 220 1.7E-21 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Gene3D G3DSA:3.40.50.880 1040 1264 7.3E-12 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF55326 618 816 1.81E-67 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SMART SM01211 1039 1294 1.9E-158 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Gene3D G3DSA:3.30.1330.10 211 421 6.1E-39 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 Gene3D G3DSA:3.30.1330.10 645 810 3.2E-17 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF82697 1 152 2.46E-53 T 06-07-2017 LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF56042 818 1033 2.69E-57 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 SUPERFAMILY SSF56042 432 615 3.59E-52 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06060 a14545ef65e37046e140997dcdfc7471 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 06-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS23605 d953f9d3a351be6229217ded2e8b7609 270 SUPERFAMILY SSF53474 34 264 6.16E-49 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23605 d953f9d3a351be6229217ded2e8b7609 270 Gene3D G3DSA:3.40.50.1820 34 264 8.8E-71 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23605 d953f9d3a351be6229217ded2e8b7609 270 Pfam PF01738 Dienelactone hydrolase family 42 265 1.3E-75 T 06-07-2017 IPR002925 Dienelactone hydrolase GO:0016787 LFZ55_RS20765 01d983a2283203247f185b6e4dba6aa1 485 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 80 398 1.6E-74 T 06-07-2017 IPR016624 Uncharacterised conserved protein UCP014753 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 5.3E-283 T 06-07-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 06-07-2017 IPR025505 FHIPEP conserved site LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 PIRSF PIRSF005419 9 692 1.7E-243 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS09870 37824307dda3f64c9d282b807208b2fc 692 Pfam PF00771 FHIPEP family 31 680 1.5E-268 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LFZ55_RS18095 41d28b490c8466e375210fae5b9de0c5 72 Gene3D G3DSA:1.20.1280.40 6 72 1.4E-37 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS18095 41d28b490c8466e375210fae5b9de0c5 72 SUPERFAMILY SSF68989 2 72 1.2E-31 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS18095 41d28b490c8466e375210fae5b9de0c5 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.4E-33 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS01135 3627dc0e4d202e29d76926dae28f30d8 495 Gene3D G3DSA:3.30.830.10 26 252 5.0E-20 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 LFZ55_RS01135 3627dc0e4d202e29d76926dae28f30d8 495 SUPERFAMILY SSF63411 29 239 1.92E-22 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS01135 3627dc0e4d202e29d76926dae28f30d8 495 Pfam PF00675 Insulinase (Peptidase family M16) 50 158 1.4E-5 T 06-07-2017 IPR011765 Peptidase M16, N-terminal LFZ55_RS01135 3627dc0e4d202e29d76926dae28f30d8 495 Pfam PF05193 Peptidase M16 inactive domain 201 377 4.2E-17 T 06-07-2017 IPR007863 Peptidase M16, C-terminal LFZ55_RS01135 3627dc0e4d202e29d76926dae28f30d8 495 SUPERFAMILY SSF63411 322 456 2.09E-5 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 SUPERFAMILY SSF53659 2 360 3.42E-122 T 06-07-2017 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 5.8E-139 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.554 T 06-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 06-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 SMART SM01329 6 355 2.3E-201 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 Gene3D G3DSA:3.40.718.10 1 357 9.1E-131 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS19825 f1be74dce66b12480b3f3b4765685b90 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 2.8E-170 T 06-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 7.5E-101 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 SUPERFAMILY SSF69189 292 385 1.41E-23 T 06-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 SMART SM00936 292 383 1.1E-31 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.7E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.7E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.7E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 SUPERFAMILY SSF56601 14 292 4.74E-75 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 Gene3D G3DSA:2.60.410.10 292 383 3.9E-31 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 4.9E-24 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS17380 3eebeb5d890cd7cd80238df7cc47964a 403 Gene3D G3DSA:3.40.710.10 37 290 3.5E-92 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS18195 0fda731fe7ffb53c5edf4bdb08d12d76 124 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 56 124 3.5E-35 T 06-07-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LFZ55_RS18195 0fda731fe7ffb53c5edf4bdb08d12d76 124 Gene3D G3DSA:1.10.150.280 46 117 3.6E-16 T 06-07-2017 LFZ55_RS18195 0fda731fe7ffb53c5edf4bdb08d12d76 124 SUPERFAMILY SSF47781 50 120 2.67E-24 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS18195 0fda731fe7ffb53c5edf4bdb08d12d76 124 Pfam PF12836 Helix-hairpin-helix motif 61 120 8.0E-20 T 06-07-2017 LFZ55_RS13745 890b0aded5fbb9d322b994b348968cc0 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 13 139 38.512 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS13745 890b0aded5fbb9d322b994b348968cc0 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 15 144 2.5E-64 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS13745 890b0aded5fbb9d322b994b348968cc0 147 Gene3D G3DSA:2.170.150.20 10 141 4.1E-62 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS13745 890b0aded5fbb9d322b994b348968cc0 147 Pfam PF01641 SelR domain 19 137 3.1E-54 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS13745 890b0aded5fbb9d322b994b348968cc0 147 SUPERFAMILY SSF51316 16 141 6.98E-59 T 06-07-2017 IPR011057 Mss4-like LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.5E-17 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Gene3D G3DSA:3.40.50.300 132 418 2.7E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SUPERFAMILY SSF68912 1 46 2.2E-12 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SMART SM00382 170 355 5.0E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Gene3D G3DSA:1.10.720.10 1 47 8.3E-23 T 06-07-2017 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SMART SM00357 52 118 9.6E-19 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SUPERFAMILY SSF52540 90 371 1.22E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.4E-32 T 06-07-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.0E-222 T 06-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.49 T 06-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 SMART SM00959 5 47 1.1E-18 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 LFZ55_RS23840 8bc4087430434060415174178f5bec09 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-22 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 SMART SM00382 49 242 1.8E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 8.8E-28 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 5.7E-19 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 SUPERFAMILY SSF52540 26 264 1.82E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 Gene3D G3DSA:3.40.50.300 8 268 6.3E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11055 7a6a262d439047dcca144c273e186508 334 Pfam PF00005 ABC transporter 41 192 5.9E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 SUPERFAMILY SSF53822 24 365 4.12E-87 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 Pfam PF13458 Periplasmic binding protein 26 362 1.7E-58 T 06-07-2017 IPR028081 Leucine-binding protein domain LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 2.3E-66 T 06-07-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LFZ55_RS01435 dc2457877af7f1b45308b96baaab1b2e 369 Gene3D G3DSA:3.40.50.2300 24 224 1.5E-64 T 06-07-2017 LFZ55_RS10845 6dde6a3e846c2bf2c2662b5c8e0abb96 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 3.6E-46 T 06-07-2017 IPR019698 Protein of unknown function DUF2583 LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 685 767 4.1E-14 T 06-07-2017 IPR009647 Penicillin-binding, C-terminal LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 768 9.8E-263 T 06-07-2017 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 SUPERFAMILY SSF53955 40 259 7.87E-66 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 Gene3D G3DSA:1.10.3810.10 58 228 1.4E-54 T 06-07-2017 LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 SUPERFAMILY SSF56601 208 640 2.48E-92 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 519 9.8E-10 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 Gene3D G3DSA:3.40.710.10 229 616 1.8E-71 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS06225 fa110c6cdb18e8d626ec2d46eb879d91 771 Pfam PF00912 Transglycosylase 62 226 2.8E-51 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 LFZ55_RS15705 9a2d19dcbb5ba1e894089ea8d8c0aa75 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 7.8E-82 T 06-07-2017 IPR009351 Protein of unknown function DUF1006 LFZ55_RS17480 f87813902dc92014a8648d15cce9b67c 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 6.4E-170 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS17480 f87813902dc92014a8648d15cce9b67c 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 1.9E-183 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS17480 f87813902dc92014a8648d15cce9b67c 487 PIRSF PIRSF002457 1 487 3.4E-162 T 06-07-2017 IPR030676 Citrate carrier CitT-related LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-14 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 SUPERFAMILY SSF53850 88 286 1.1E-39 T 06-07-2017 LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 Pfam PF03466 LysR substrate binding domain 88 285 7.2E-36 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 Gene3D G3DSA:3.40.190.10 176 256 4.6E-15 T 06-07-2017 LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 SUPERFAMILY SSF46785 3 85 1.42E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 Gene3D G3DSA:3.40.190.10 90 175 5.7E-18 T 06-07-2017 LFZ55_RS09370 322f3677a0aff71dafe727c53add6773 297 Gene3D G3DSA:1.10.10.10 2 85 9.8E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11340 0c612952abd0b22c194ae05390b18429 71 Gene3D G3DSA:3.30.910.10 1 71 3.5E-20 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS11340 0c612952abd0b22c194ae05390b18429 71 Pfam PF06183 DinI-like family 29 70 6.7E-15 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS11340 0c612952abd0b22c194ae05390b18429 71 SUPERFAMILY SSF54857 1 71 9.55E-20 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS20650 cbe49731a14ffd3ddcf019c9cf4b41a3 413 SUPERFAMILY SSF103473 19 402 3.92E-48 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS20650 cbe49731a14ffd3ddcf019c9cf4b41a3 413 Gene3D G3DSA:1.20.1250.20 216 402 1.0E-6 T 06-07-2017 LFZ55_RS20650 cbe49731a14ffd3ddcf019c9cf4b41a3 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS20650 cbe49731a14ffd3ddcf019c9cf4b41a3 413 Gene3D G3DSA:1.20.1250.20 21 196 2.9E-24 T 06-07-2017 LFZ55_RS20650 cbe49731a14ffd3ddcf019c9cf4b41a3 413 Pfam PF07690 Major Facilitator Superfamily 26 356 2.0E-31 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS01960 deb51186bb6ec25a619a4701f90d4855 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 8.5E-37 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LFZ55_RS01960 deb51186bb6ec25a619a4701f90d4855 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 246 1.0E-27 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LFZ55_RS01960 deb51186bb6ec25a619a4701f90d4855 272 Gene3D G3DSA:1.10.287.460 31 134 1.7E-44 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LFZ55_RS01960 deb51186bb6ec25a619a4701f90d4855 272 Gene3D G3DSA:3.10.50.40 135 249 1.3E-43 T 06-07-2017 LFZ55_RS01960 deb51186bb6ec25a619a4701f90d4855 272 SUPERFAMILY SSF54534 41 249 4.32E-65 T 06-07-2017 LFZ55_RS09435 2e9473d603f6dd935b57c559befed550 265 SUPERFAMILY SSF55486 34 245 3.59E-41 T 06-07-2017 LFZ55_RS09435 2e9473d603f6dd935b57c559befed550 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 23 243 1.7E-63 T 06-07-2017 IPR010384 MtfA family LFZ55_RS09435 2e9473d603f6dd935b57c559befed550 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 62.665 T 06-07-2017 IPR010384 MtfA family LFZ55_RS09435 2e9473d603f6dd935b57c559befed550 265 Gene3D G3DSA:3.40.390.10 30 244 5.8E-25 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 Gene3D G3DSA:1.10.710.10 49 312 1.1E-18 T 06-07-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 Pfam PF02335 Cytochrome c552 43 472 8.5E-179 T 06-07-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 477 59.365 T 06-07-2017 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 Gene3D G3DSA:1.20.140.10 313 445 3.3E-57 T 06-07-2017 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 PIRSF PIRSF000243 23 478 2.2E-127 T 06-07-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 SUPERFAMILY SSF48695 38 472 1.11E-164 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS22285 9dd3e019a55892e6c57caf5b0c95f691 478 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 475 1.6E-256 T 06-07-2017 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 LFZ55_RS08280 88f62cbdf1145f1c6ee854fb885f14a9 455 Pfam PF03315 Serine dehydratase beta chain 3 154 1.6E-40 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS08280 88f62cbdf1145f1c6ee854fb885f14a9 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 446 1.6E-163 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS08280 88f62cbdf1145f1c6ee854fb885f14a9 455 Pfam PF03313 Serine dehydratase alpha chain 184 445 1.2E-89 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit LFZ55_RS08280 88f62cbdf1145f1c6ee854fb885f14a9 455 SUPERFAMILY SSF143548 16 154 1.94E-31 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS08280 88f62cbdf1145f1c6ee854fb885f14a9 455 Gene3D G3DSA:3.30.1330.90 10 154 7.9E-36 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 Gene3D G3DSA:3.40.190.80 148 243 1.9E-40 T 06-07-2017 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 Pfam PF00459 Inositol monophosphatase family 3 233 1.3E-48 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 2.9E-110 T 06-07-2017 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 SUPERFAMILY SSF56655 1 243 3.53E-75 T 06-07-2017 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 Gene3D G3DSA:3.30.540.10 1 147 5.8E-45 T 06-07-2017 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 06-07-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 LFZ55_RS21515 1305212b64b52bacd6daa375d6bd50fb 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 06-07-2017 IPR020583 Inositol monophosphatase, metal-binding site LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SMART SM00073 817 905 9.6E-4 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SUPERFAMILY SSF47384 427 509 5.3E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SUPERFAMILY SSF55874 498 664 7.47E-41 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SMART SM00388 444 509 2.9E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Pfam PF00512 His Kinase A (phospho-acceptor) domain 444 507 1.0E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SMART SM00448 680 792 6.9E-14 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Pfam PF00672 HAMP domain 335 405 3.5E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SMART SM00387 555 662 6.2E-36 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Gene3D G3DSA:3.40.50.2300 678 817 9.4E-25 T 06-07-2017 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 660 4.6E-25 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Pfam PF00072 Response regulator receiver domain 683 792 1.5E-14 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Gene3D G3DSA:1.10.287.130 437 504 2.8E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Gene3D G3DSA:3.30.565.10 513 667 1.0E-43 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SUPERFAMILY SSF47226 805 906 9.16E-16 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SUPERFAMILY SSF52172 678 806 2.99E-24 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Pfam PF01627 Hpt domain 826 882 5.4E-10 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 5 805 0.0 T 06-07-2017 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 SMART SM00304 355 408 7.4E-5 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 PIRSF PIRSF036437 1 911 0.0 T 06-07-2017 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 Gene3D G3DSA:1.20.120.160 818 883 5.1E-15 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 640 3.8E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 605 3.8E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 619 3.8E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS00085 fc9261b3760faf4ec95e683237c874a8 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 659 3.8E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 4.6E-57 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 4.6E-57 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 4.6E-57 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 4.6E-57 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 4.6E-57 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 Gene3D G3DSA:1.10.287.950 280 484 8.7E-61 T 06-07-2017 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 SMART SM00304 212 264 1.1E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 511 2.6E-60 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 Pfam PF00672 HAMP domain 193 261 8.3E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 SUPERFAMILY SSF58104 232 518 2.88E-73 T 06-07-2017 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 SMART SM00283 265 512 1.8E-94 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS03470 6edc232668a4d07487807c873a03301f 547 Pfam PF02203 Tar ligand binding domain homologue 4 165 1.2E-7 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 40.414 T 06-07-2017 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 06-07-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 Gene3D G3DSA:3.40.50.300 1 168 1.2E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 PRINTS PR01100 Shikimate kinase family signature 74 83 1.9E-23 T 06-07-2017 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 PRINTS PR01100 Shikimate kinase family signature 29 42 1.9E-23 T 06-07-2017 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 PRINTS PR01100 Shikimate kinase family signature 57 65 1.9E-23 T 06-07-2017 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 PRINTS PR01100 Shikimate kinase family signature 95 112 1.9E-23 T 06-07-2017 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 PRINTS PR01100 Shikimate kinase family signature 5 20 1.9E-23 T 06-07-2017 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 SUPERFAMILY SSF52540 1 168 1.85E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.129 T 06-07-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS18495 ffac704f9346a1869910f8f15b805cbd 181 Pfam PF01202 Shikimate kinase 11 168 5.4E-48 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS17525 5820591275fccf50bd9f013026bcdcab 248 SUPERFAMILY SSF54423 19 78 1.83E-22 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LFZ55_RS17525 5820591275fccf50bd9f013026bcdcab 248 Pfam PF13098 Thioredoxin-like domain 114 244 4.2E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17525 5820591275fccf50bd9f013026bcdcab 248 Gene3D G3DSA:3.40.30.10 105 247 2.2E-39 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17525 5820591275fccf50bd9f013026bcdcab 248 SUPERFAMILY SSF52833 83 246 4.95E-42 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 Gene3D G3DSA:3.10.105.10 308 488 6.8E-37 T 06-07-2017 LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 SUPERFAMILY SSF53850 46 519 9.05E-93 T 06-07-2017 LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 Gene3D G3DSA:3.90.76.10 74 192 1.3E-28 T 06-07-2017 LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 446 1.2E-77 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 Gene3D G3DSA:3.40.190.10 193 307 2.2E-25 T 06-07-2017 LFZ55_RS13960 c61f87b8fef95635a5fb3271b099225f 546 PIRSF PIRSF002741 13 534 6.0E-71 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS09475 4a51719d0d907ef62aa9f1da9c65574e 156 PIRSF PIRSF018267 1 150 1.4E-48 T 06-07-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LFZ55_RS09475 4a51719d0d907ef62aa9f1da9c65574e 156 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 3.3E-49 T 06-07-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LFZ55_RS09475 4a51719d0d907ef62aa9f1da9c65574e 156 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.9E-34 T 06-07-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LFZ55_RS09475 4a51719d0d907ef62aa9f1da9c65574e 156 Gene3D G3DSA:3.40.960.10 21 154 8.7E-48 T 06-07-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LFZ55_RS09475 4a51719d0d907ef62aa9f1da9c65574e 156 SUPERFAMILY SSF52980 2 153 9.12E-51 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 SMART SM00346 18 108 7.5E-41 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 Pfam PF09339 IclR helix-turn-helix domain 20 68 6.7E-14 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 Pfam PF01614 Bacterial transcriptional regulator 138 263 8.5E-42 T 06-07-2017 IPR014757 Transcription regulator IclR, C-terminal LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 SUPERFAMILY SSF46785 19 92 2.12E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 Gene3D G3DSA:3.30.450.40 87 268 4.5E-55 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 SUPERFAMILY SSF55781 85 267 1.18E-44 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS00870 89e6fb4c1692e7ca1210a3d8ad9e1a67 271 Gene3D G3DSA:1.10.10.10 11 86 1.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 SUPERFAMILY SSF52172 189 320 3.56E-21 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 SMART SM00260 17 161 9.0E-13 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 SMART SM00448 187 312 1.4E-10 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 Pfam PF00072 Response regulator receiver domain 190 311 6.2E-13 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 SUPERFAMILY SSF50341 18 165 2.22E-24 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 Gene3D G3DSA:3.40.50.2300 190 321 3.6E-26 T 06-07-2017 LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 PIRSF PIRSF002867 1 320 4.0E-106 T 06-07-2017 IPR024181 Chemotaxis response regulator CheV LFZ55_RS07695 63032666a01d65ea786eafea5e9e7855 334 Pfam PF01584 CheW-like domain 22 163 6.9E-30 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS11080 e60e02daa4e14477c9fe0104f0fe6a84 98 SUPERFAMILY SSF54909 2 98 2.32E-30 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS11080 e60e02daa4e14477c9fe0104f0fe6a84 98 Gene3D G3DSA:3.30.70.1060 2 98 7.7E-37 T 06-07-2017 LFZ55_RS11080 e60e02daa4e14477c9fe0104f0fe6a84 98 Pfam PF03795 YCII-related domain 2 94 9.1E-28 T 06-07-2017 IPR005545 YCII-related LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 PIRSF PIRSF000545 1 316 6.7E-150 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 SUPERFAMILY SSF52540 9 316 2.25E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 6.7E-180 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 5.9E-14 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 Gene3D G3DSA:3.40.50.300 10 316 3.0E-111 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22870 c9aa23550167c2973db6ed1a88123824 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 190.859 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LFZ55_RS12080 0b2021eb8a591543fff9797ad360d20d 353 Gene3D G3DSA:2.130.10.10 49 333 1.3E-36 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS12080 0b2021eb8a591543fff9797ad360d20d 353 SUPERFAMILY SSF51004 38 337 4.97E-37 T 06-07-2017 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LFZ55_RS10150 5344255c9c9377b247f7d433db6ed268 118 Gene3D G3DSA:1.10.530.40 22 115 3.2E-28 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 LFZ55_RS10150 5344255c9c9377b247f7d433db6ed268 118 Pfam PF00959 Phage lysozyme 44 117 5.8E-13 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LFZ55_RS10150 5344255c9c9377b247f7d433db6ed268 118 SUPERFAMILY SSF53955 5 113 1.74E-30 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 SUPERFAMILY SSF53613 1 293 1.71E-67 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 Hamap MF_00999 Sulfofructose kinase. 1 298 69.186 T 06-07-2017 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 Pfam PF00294 pfkB family carbohydrate kinase 2 286 8.9E-63 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 PRINTS PR00990 Ribokinase signature 33 52 2.9E-6 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 PRINTS PR00990 Ribokinase signature 6 27 2.9E-6 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 PRINTS PR00990 Ribokinase signature 209 220 2.9E-6 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS23350 4390836c4dab31396b18ec9704d297f8 298 Gene3D G3DSA:3.40.1190.20 2 295 4.9E-81 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS18610 a282041ebcfe218b269e8f475d7e4539 210 Pfam PF01810 LysE type translocator 17 206 2.8E-53 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS18610 a282041ebcfe218b269e8f475d7e4539 210 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 202 2.5E-68 T 06-07-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 LFZ55_RS18610 a282041ebcfe218b269e8f475d7e4539 210 PIRSF PIRSF006324 1 207 4.4E-51 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 162 359 3.7E-10 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 Gene3D G3DSA:2.40.50.100 172 207 1.5E-26 T 06-07-2017 LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 Gene3D G3DSA:2.40.50.100 64 97 1.5E-26 T 06-07-2017 LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 292 4.5E-15 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 SUPERFAMILY SSF111369 51 299 3.14E-89 T 06-07-2017 LFZ55_RS02295 8c3bd3a9cb2c2b1fc5a7245b61a0800e 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 1.5E-86 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 PIRSF PIRSF000148 1 368 1.3E-71 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 5.3E-24 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 Gene3D G3DSA:3.30.360.10 144 351 5.6E-77 T 06-07-2017 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.58 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 9.6E-224 T 06-07-2017 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 4.2E-60 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 06-07-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 SMART SM00859 3 123 1.1E-25 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 SUPERFAMILY SSF51735 1 148 1.14E-55 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 SUPERFAMILY SSF55347 135 355 2.47E-78 T 06-07-2017 LFZ55_RS01555 757e1fdef1ac7e3971c4efbae8387cf9 368 Gene3D G3DSA:3.40.50.720 1 143 8.5E-66 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00040 145c2fe2f39cc1edc8be1060586c3e8f 232 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 18 231 2.4E-31 T 06-07-2017 IPR009331 Oligogalacturonate-specific porin LFZ55_RS00040 145c2fe2f39cc1edc8be1060586c3e8f 232 Gene3D G3DSA:2.40.230.30 21 231 3.5E-58 T 06-07-2017 LFZ55_RS12910 ede6d529ad28f1c6dde5bd6d89edc414 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 8.5E-28 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS12910 ede6d529ad28f1c6dde5bd6d89edc414 71 SUPERFAMILY SSF68989 1 71 1.06E-22 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS12910 ede6d529ad28f1c6dde5bd6d89edc414 71 Gene3D G3DSA:1.20.1280.40 1 71 1.2E-31 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA LFZ55_RS00135 4775cf4b0aad78c404ab063119ad79b9 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 1.3E-18 T 06-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LFZ55_RS00135 4775cf4b0aad78c404ab063119ad79b9 70 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 5.1E-17 T 06-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LFZ55_RS07970 4775cf4b0aad78c404ab063119ad79b9 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 1.3E-18 T 06-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LFZ55_RS07970 4775cf4b0aad78c404ab063119ad79b9 70 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 5.1E-17 T 06-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 Pfam PF01888 CbiD 17 273 1.6E-92 T 06-07-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 4.1E-85 T 06-07-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 PIRSF PIRSF026782 13 374 1.3E-131 T 06-07-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 Gene3D G3DSA:3.30.2110.10 19 188 6.5E-53 T 06-07-2017 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 30.911 T 06-07-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS09085 11bac1a7de25318b2ea27563e0eeefc2 379 SUPERFAMILY SSF111342 8 291 1.96E-85 T 06-07-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 Pfam PF01175 Urocanase 11 546 2.8E-260 T 06-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 06-07-2017 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 Gene3D G3DSA:3.40.1770.10 359 554 1.6E-163 T 06-07-2017 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 Gene3D G3DSA:3.40.1770.10 6 140 1.6E-163 T 06-07-2017 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 SUPERFAMILY SSF111326 8 554 4.19E-259 T 06-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 553 1.8E-300 T 06-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 PIRSF PIRSF001423 2 560 6.8E-293 T 06-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 Hamap MF_00577 Urocanate hydratase [hutU]. 7 555 49.537 T 06-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16655 42cc56d7a13c269a64059a0321bda7d6 561 Gene3D G3DSA:3.40.50.10730 141 348 7.9E-95 T 06-07-2017 LFZ55_RS16455 0e5366db8dca31f6a7f216228d8e13fe 526 Gene3D G3DSA:3.40.720.10 277 486 3.5E-10 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS16455 0e5366db8dca31f6a7f216228d8e13fe 526 SUPERFAMILY SSF53649 220 485 2.18E-17 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS16455 0e5366db8dca31f6a7f216228d8e13fe 526 Pfam PF00884 Sulfatase 219 483 1.5E-38 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS16305 1da41a805a9cae1cd5b278e87b6c90f8 216 SUPERFAMILY SSF46689 7 86 8.21E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS16305 1da41a805a9cae1cd5b278e87b6c90f8 216 SUPERFAMILY SSF48498 104 180 4.64E-6 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS16305 1da41a805a9cae1cd5b278e87b6c90f8 216 Gene3D G3DSA:1.10.357.10 13 181 4.3E-29 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS16305 1da41a805a9cae1cd5b278e87b6c90f8 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.5E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 26 342 6.7E-171 T 06-07-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 Pfam PF01207 Dihydrouridine synthase (Dus) 30 337 1.0E-97 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 PIRSF PIRSF006621 16 342 2.5E-72 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 SUPERFAMILY SSF51395 27 322 9.16E-71 T 06-07-2017 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 Gene3D G3DSA:3.20.20.70 25 267 1.5E-75 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS22470 fb0ea44938f512b9b9af947da0218cdf 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 19 343 52.805 T 06-07-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LFZ55_RS22535 5c1520bb3718589ac29ed55ad46ed84e 452 Gene3D G3DSA:2.40.170.10 26 452 1.7E-171 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS22535 5c1520bb3718589ac29ed55ad46ed84e 452 Hamap MF_01301 Maltoporin [lamB]. 4 452 43.755 T 06-07-2017 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 LFZ55_RS22535 5c1520bb3718589ac29ed55ad46ed84e 452 Pfam PF02264 LamB porin 28 452 9.7E-149 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS22535 5c1520bb3718589ac29ed55ad46ed84e 452 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 448 0.0 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS22535 5c1520bb3718589ac29ed55ad46ed84e 452 SUPERFAMILY SSF56935 26 452 8.24E-156 T 06-07-2017 LFZ55_RS07975 f5ca0ea1fb02e8784ba90adbaf8cc8f4 159 Pfam PF03100 CcmE 4 137 2.1E-43 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS07975 f5ca0ea1fb02e8784ba90adbaf8cc8f4 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.62 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS07975 f5ca0ea1fb02e8784ba90adbaf8cc8f4 159 SUPERFAMILY SSF82093 30 143 2.09E-39 T 06-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LFZ55_RS07975 f5ca0ea1fb02e8784ba90adbaf8cc8f4 159 Gene3D G3DSA:2.40.50.140 26 131 2.8E-40 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15975 0de247fb1629f7e4f2222ed5be1f7a75 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 3.8E-26 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS15975 0de247fb1629f7e4f2222ed5be1f7a75 337 Gene3D G3DSA:3.90.25.10 305 332 4.2E-5 T 06-07-2017 LFZ55_RS15975 0de247fb1629f7e4f2222ed5be1f7a75 337 Gene3D G3DSA:3.40.50.720 1 248 4.4E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15975 0de247fb1629f7e4f2222ed5be1f7a75 337 SUPERFAMILY SSF51735 298 335 5.72E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15975 0de247fb1629f7e4f2222ed5be1f7a75 337 SUPERFAMILY SSF51735 1 270 5.72E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS20585 a7045eda1b4cd20043c032586bd33968 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 56.169 T 06-07-2017 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 LFZ55_RS20585 a7045eda1b4cd20043c032586bd33968 763 Gene3D G3DSA:3.40.720.10 163 467 4.2E-24 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS20585 a7045eda1b4cd20043c032586bd33968 763 Pfam PF00884 Sulfatase 163 446 2.7E-23 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS20585 a7045eda1b4cd20043c032586bd33968 763 SUPERFAMILY SSF53649 161 469 1.29E-31 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 SMART SM00342 222 304 7.1E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 Gene3D G3DSA:1.10.10.60 258 303 1.6E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 258 300 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 288 2.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 304 2.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 Pfam PF12833 Helix-turn-helix domain 229 305 2.4E-16 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05035 7ca619638bd59e0c3e57547fdca40e06 309 SUPERFAMILY SSF46689 258 305 6.81E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 SUPERFAMILY SSF52374 145 266 3.97E-23 T 06-07-2017 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 SUPERFAMILY SSF52374 303 334 3.97E-23 T 06-07-2017 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 SMART SM00764 147 333 5.6E-134 T 06-07-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 337 1.7E-163 T 06-07-2017 IPR005216 Citrate lyase ligase GO:0008771 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 Gene3D G3DSA:3.40.630.30 40 115 1.3E-7 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 9.9E-80 T 06-07-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 Gene3D G3DSA:3.40.50.620 128 334 1.5E-35 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 121 338 1.0E-123 T 06-07-2017 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 3.5E-10 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 SUPERFAMILY SSF55729 38 119 7.03E-8 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS17450 8c58ea76b189ae7d62862d5675af9d26 358 PIRSF PIRSF005751 1 351 4.2E-135 T 06-07-2017 IPR005216 Citrate lyase ligase GO:0008771 LFZ55_RS10645 2b18b394d5f2e135c5139931336823d8 256 Pfam PF03609 PTS system sorbose-specific iic component 3 233 8.3E-69 T 06-07-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 SUPERFAMILY SSF47323 391 548 4.3E-47 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 7.1E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 541 677 2.7E-47 T 06-07-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Pfam PF01588 Putative tRNA binding domain 581 674 3.6E-22 T 06-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Gene3D G3DSA:1.10.730.10 391 526 4.0E-43 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Gene3D G3DSA:2.40.50.140 568 677 8.7E-40 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.903 T 06-07-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Gene3D G3DSA:2.20.28.20 145 176 1.8E-19 T 06-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 SUPERFAMILY SSF50249 570 676 2.45E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Gene3D G3DSA:3.40.50.620 6 144 3.6E-93 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Gene3D G3DSA:3.40.50.620 183 385 3.6E-93 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 2.9E-208 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 SUPERFAMILY SSF57770 142 176 1.23E-12 T 06-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 SUPERFAMILY SSF52374 176 388 1.4E-105 T 06-07-2017 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 SUPERFAMILY SSF52374 6 141 1.4E-105 T 06-07-2017 LFZ55_RS08495 8bec407ab6b1d6a2ed3fdc2946426218 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 1.3E-165 T 06-07-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS16225 f7ab6136eb1ba1661bbc5c94b0649ef8 591 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 13 64 6.3E-14 T 06-07-2017 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 LFZ55_RS16225 f7ab6136eb1ba1661bbc5c94b0649ef8 591 Pfam PF03237 Terminase-like family 164 571 7.8E-88 T 06-07-2017 IPR004921 Terminase, large subunit LFZ55_RS22260 620834ef356f7e36ece6b82b56a878db 153 Pfam PF03918 Cytochrome C biogenesis protein 26 150 2.0E-42 T 06-07-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family LFZ55_RS22260 620834ef356f7e36ece6b82b56a878db 153 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 24 142 6.7E-59 T 06-07-2017 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 Gene3D G3DSA:3.40.30.10 4 183 4.9E-59 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 Pfam PF00578 AhpC/TSA family 10 133 1.4E-32 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.0E-6 T 06-07-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 SUPERFAMILY SSF52833 1 186 1.98E-53 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 PIRSF PIRSF000239 1 187 2.7E-50 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS17520 00214f71e6ea04df4d31681d47d35498 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.0E-103 T 06-07-2017 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 06-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Gene3D G3DSA:3.40.50.10490 263 501 2.9E-179 T 06-07-2017 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Gene3D G3DSA:3.40.50.10490 147 184 2.9E-179 T 06-07-2017 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Gene3D G3DSA:3.40.50.10490 4 102 2.9E-179 T 06-07-2017 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Gene3D G3DSA:1.10.1390.10 511 548 1.8E-22 T 06-07-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Pfam PF00342 Phosphoglucose isomerase 52 541 5.4E-257 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.114 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.3E-55 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 06-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS22590 77b191f025a5ba75ec56dfd6091d57f0 549 SUPERFAMILY SSF53697 5 548 1.95E-227 T 06-07-2017 LFZ55_RS13030 7e6a2d8cac4de28456d30898edbcbc86 199 Gene3D G3DSA:1.10.357.10 8 195 8.6E-34 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS13030 7e6a2d8cac4de28456d30898edbcbc86 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 189 2.7E-10 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS13030 7e6a2d8cac4de28456d30898edbcbc86 199 SUPERFAMILY SSF46689 8 78 5.13E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13030 7e6a2d8cac4de28456d30898edbcbc86 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 7.0E-11 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS13030 7e6a2d8cac4de28456d30898edbcbc86 199 SUPERFAMILY SSF48498 81 194 1.15E-21 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 275 288 2.4E-15 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 92 108 2.4E-15 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 221 235 2.4E-15 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 Pfam PF00145 C-5 cytosine-specific DNA methylase 91 453 1.4E-74 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 173 185 - T 06-07-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 Gene3D G3DSA:3.40.50.150 91 300 6.7E-50 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 93 454 1.0E-103 T 06-07-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 Gene3D G3DSA:3.90.120.10 307 442 4.6E-29 T 06-07-2017 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 436 454 - T 06-07-2017 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 LFZ55_RS09470 c204af886f76857adbbba20951b91382 476 SUPERFAMILY SSF53335 91 454 3.63E-77 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04515 2ebdcc84134665ec10646c8f29aefa4e 147 SUPERFAMILY SSF82649 3 144 1.94E-41 T 06-07-2017 LFZ55_RS04515 2ebdcc84134665ec10646c8f29aefa4e 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 142 5.1E-68 T 06-07-2017 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE LFZ55_RS04515 2ebdcc84134665ec10646c8f29aefa4e 147 Pfam PF02657 Fe-S metabolism associated domain 27 140 4.0E-36 T 06-07-2017 IPR003808 Fe-S metabolism associated domain, SufE-like LFZ55_RS04515 2ebdcc84134665ec10646c8f29aefa4e 147 Gene3D G3DSA:3.90.1010.10 6 145 9.9E-45 T 06-07-2017 LFZ55_RS16005 187873485fee0ab3efbf3886c675d2c0 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 4.3E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16005 187873485fee0ab3efbf3886c675d2c0 238 Gene3D G3DSA:1.10.3720.10 6 227 6.0E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16005 187873485fee0ab3efbf3886c675d2c0 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 87 2.3E-12 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS16005 187873485fee0ab3efbf3886c675d2c0 238 SUPERFAMILY SSF161098 8 216 1.96E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS15130 847061950b27999b525ad64430a74834 295 Pfam PF04954 Siderophore-interacting protein 147 293 5.4E-32 T 06-07-2017 IPR007037 Siderophore-interacting protein LFZ55_RS15130 847061950b27999b525ad64430a74834 295 Gene3D G3DSA:3.40.50.80 141 295 1.6E-33 T 06-07-2017 LFZ55_RS15130 847061950b27999b525ad64430a74834 295 SUPERFAMILY SSF63380 8 129 2.2E-9 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS15130 847061950b27999b525ad64430a74834 295 Pfam PF08021 Siderophore-interacting FAD-binding domain 13 129 5.6E-34 T 06-07-2017 IPR013113 FAD-binding 9, siderophore-interacting LFZ55_RS15130 847061950b27999b525ad64430a74834 295 Gene3D G3DSA:2.40.30.10 5 128 7.4E-30 T 06-07-2017 LFZ55_RS13945 eb3304c71b6522ee84f11ec8b0a10c6f 265 SMART SM00382 35 223 2.4E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS13945 eb3304c71b6522ee84f11ec8b0a10c6f 265 Gene3D G3DSA:3.40.50.300 16 233 1.6E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13945 eb3304c71b6522ee84f11ec8b0a10c6f 265 SUPERFAMILY SSF52540 23 229 1.33E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13945 eb3304c71b6522ee84f11ec8b0a10c6f 265 Pfam PF00005 ABC transporter 26 175 7.8E-22 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 Pfam PF13180 PDZ domain 279 348 1.0E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 SUPERFAMILY SSF50156 256 352 2.5E-21 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 7.9E-48 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 SMART SM00228 257 339 1.1E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 1.5E-176 T 06-07-2017 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 Gene3D G3DSA:2.40.10.10 144 258 5.7E-39 T 06-07-2017 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 4.2E-29 T 06-07-2017 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 SUPERFAMILY SSF50494 46 254 4.8E-61 T 06-07-2017 IPR009003 Peptidase S1, PA clan LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 Gene3D G3DSA:2.30.42.10 259 353 5.2E-26 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS02465 f04255739de928915520f72082da0f0c 355 Gene3D G3DSA:2.40.10.10 34 138 2.1E-31 T 06-07-2017 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 Pfam PF01430 Hsp33 protein 5 272 3.9E-86 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 PIRSF PIRSF005261 1 285 3.7E-72 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 SUPERFAMILY SSF64397 4 232 4.32E-77 T 06-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 Gene3D G3DSA:3.90.1280.10 226 283 4.7E-25 T 06-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.092 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 Gene3D G3DSA:1.10.287.480 178 225 1.6E-26 T 06-07-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 SUPERFAMILY SSF118352 225 283 8.11E-20 T 06-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LFZ55_RS01695 6be1c073462d91a7381093eead363e73 292 Gene3D G3DSA:3.55.30.10 2 176 3.2E-67 T 06-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 SUPERFAMILY SSF53041 1 136 3.53E-46 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 SMART SM00857 3 137 2.0E-61 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 Pfam PF00239 Resolvase, N terminal domain 4 136 1.3E-45 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 SUPERFAMILY SSF46689 139 187 6.57E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 Gene3D G3DSA:1.10.10.60 139 188 3.0E-22 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 Gene3D G3DSA:3.40.50.1390 3 120 8.9E-43 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 Pfam PF02796 Helix-turn-helix domain of resolvase 139 182 7.2E-17 T 06-07-2017 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 LFZ55_RS05580 61436f5735e36c49b8b64507f1882f5f 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 3.1E-63 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 SUPERFAMILY SSF55874 4 213 8.51E-67 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 06-07-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 PIRSF PIRSF002583 1 624 2.7E-220 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 Gene3D G3DSA:3.30.565.10 5 238 2.1E-83 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 SUPERFAMILY SSF54211 230 485 1.59E-102 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 SUPERFAMILY SSF110942 510 623 2.88E-35 T 06-07-2017 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 SMART SM00387 27 184 3.1E-12 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.043 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 Pfam PF00183 Hsp90 protein 211 622 1.5E-126 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LFZ55_RS18015 420cb746752ead54f58327a66f88fec1 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 9.0E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 187 406 6.2E-48 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 SUPERFAMILY SSF53187 333 409 3.77E-53 T 06-07-2017 LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 SUPERFAMILY SSF53187 185 281 3.77E-53 T 06-07-2017 LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 Gene3D G3DSA:3.40.630.40 185 282 6.7E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 Gene3D G3DSA:3.40.630.40 334 409 6.7E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS21740 823bf9f0b34c38f8369077d473892e67 438 SMART SM00646 247 406 2.5E-73 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.735 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PIRSF PIRSF000722 2 400 7.9E-143 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 SUPERFAMILY SSF53067 160 398 1.48E-84 T 06-07-2017 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 Gene3D G3DSA:3.30.420.40 5 207 5.1E-10 T 06-07-2017 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 SUPERFAMILY SSF53067 4 199 3.95E-62 T 06-07-2017 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 Gene3D G3DSA:3.30.420.40 208 398 1.0E-74 T 06-07-2017 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 Pfam PF00871 Acetokinase family 6 393 1.9E-176 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.3E-48 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS07580 71f601b6f02f381e336529da3a57b8a3 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.1E-186 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS09880 02a38f6e1b1b0dcb080bcdc1008c1ddf 379 Gene3D G3DSA:1.50.10.10 18 376 1.4E-107 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS09880 02a38f6e1b1b0dcb080bcdc1008c1ddf 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 1.9E-112 T 06-07-2017 IPR010905 Glycosyl hydrolase, family 88 LFZ55_RS09880 02a38f6e1b1b0dcb080bcdc1008c1ddf 379 SUPERFAMILY SSF48208 26 377 1.04E-91 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 SMART SM00382 223 429 2.2E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 Gene3D G3DSA:1.10.860.10 27 129 1.3E-41 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 2.5E-37 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 1.0E-174 T 06-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 SUPERFAMILY SSF52540 204 275 4.39E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 SUPERFAMILY SSF52540 302 456 4.39E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 SUPERFAMILY SSF48024 25 136 4.18E-39 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 Gene3D G3DSA:3.40.50.300 192 464 3.9E-103 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22455 0d3de91bcda436544ce162b396e8b5b5 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 1.2E-112 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.1E-216 T 06-07-2017 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 8.5E-33 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 Gene3D G3DSA:3.30.1360.60 6 83 8.6E-22 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.0E-15 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 Pfam PF00367 phosphotransferase system, EIIB 12 39 9.9E-11 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS21325 a99071ee027eca7dd9821d6989a3b49e 472 SUPERFAMILY SSF55604 10 82 1.06E-18 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS11420 0ad1db78ac4ad5ba016a90716a07353f 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 5.8E-36 T 06-07-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 LFZ55_RS11420 0ad1db78ac4ad5ba016a90716a07353f 430 SUPERFAMILY SSF53850 20 426 2.23E-58 T 06-07-2017 LFZ55_RS11420 0ad1db78ac4ad5ba016a90716a07353f 430 Gene3D G3DSA:3.40.190.10 149 348 1.0E-40 T 06-07-2017 LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 SMART SM00382 30 223 2.1E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 Gene3D G3DSA:3.40.50.300 4 247 3.7E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 2.4E-123 T 06-07-2017 IPR012700 Phosphonate C-P lyase system, PhnK LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 SUPERFAMILY SSF52540 3 248 6.09E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 Pfam PF00005 ABC transporter 22 173 5.0E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22200 1c520831476499be623200c2ff30ecbc 252 PIRSF PIRSF037116 1 252 8.7E-140 T 06-07-2017 IPR012700 Phosphonate C-P lyase system, PhnK LFZ55_RS10640 82cc75c529dbbc7fbe3fdccd8c88f06b 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 1.0E-46 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10640 82cc75c529dbbc7fbe3fdccd8c88f06b 165 Gene3D G3DSA:3.40.35.10 5 162 1.7E-53 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10640 82cc75c529dbbc7fbe3fdccd8c88f06b 165 SUPERFAMILY SSF52728 5 161 2.88E-47 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS10640 82cc75c529dbbc7fbe3fdccd8c88f06b 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 154 3.1E-52 T 06-07-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 5.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 5.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 5.6E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 Gene3D G3DSA:1.10.10.10 137 187 6.2E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09515 619a400edae599fad9123339ba738654 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 6.0E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 49.753 T 06-07-2017 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 SUPERFAMILY SSF46894 131 186 7.48E-11 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS09515 619a400edae599fad9123339ba738654 207 SMART SM00421 135 192 1.3E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 Pfam PF04851 Type III restriction enzyme, res subunit 16 185 8.4E-21 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 Gene3D G3DSA:3.40.50.300 284 383 4.1E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 SMART SM00487 13 213 3.2E-6 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 Gene3D G3DSA:3.40.50.300 10 188 1.7E-18 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 SMART SM00490 296 377 3.1E-4 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 Pfam PF00271 Helicase conserved C-terminal domain 278 376 6.1E-9 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 SUPERFAMILY SSF52540 37 186 1.23E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00475 be97957c5595c17bda5eaba92fdbdcbd 619 SUPERFAMILY SSF52540 258 378 1.23E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Gene3D G3DSA:3.20.20.140 6 257 2.5E-21 T 06-07-2017 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Pfam PF02811 PHP domain 8 171 4.7E-41 T 06-07-2017 IPR004013 PHP domain GO:0003824 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 SMART SM00481 7 74 1.1E-26 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 3.8E-179 T 06-07-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Gene3D G3DSA:1.10.150.280 836 883 4.4E-5 T 06-07-2017 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 SUPERFAMILY SSF89550 6 263 1.1E-16 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 06-07-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 9.3E-25 T 06-07-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Gene3D G3DSA:2.40.50.140 982 1078 1.6E-10 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS19235 233da01b87be7d62e2f5502000def48a 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 2.1E-8 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LFZ55_RS12215 7e9722ca0473a07c1d43cd0845f2a521 109 Gene3D G3DSA:1.10.890.10 25 105 1.5E-8 T 06-07-2017 IPR010486 HNS-dependent expression A/B LFZ55_RS12215 7e9722ca0473a07c1d43cd0845f2a521 109 Pfam PF06411 HdeA/HdeB family 12 97 3.6E-21 T 06-07-2017 IPR010486 HNS-dependent expression A/B LFZ55_RS12215 7e9722ca0473a07c1d43cd0845f2a521 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 1 107 3.0E-57 T 06-07-2017 LFZ55_RS12215 7e9722ca0473a07c1d43cd0845f2a521 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 104 28.609 T 06-07-2017 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 SUPERFAMILY SSF46894 139 198 5.78E-14 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 SMART SM00421 142 199 9.1E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 Gene3D G3DSA:1.10.10.10 141 197 1.1E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 6.3E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 6.3E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 6.3E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12580 11d0523204eee54ec6252bdcd4a55fe8 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 196 1.6E-16 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 SMART SM00382 24 209 3.1E-19 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 SUPERFAMILY SSF52540 1 222 4.96E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 Gene3D G3DSA:3.40.50.300 18 222 1.7E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 Pfam PF00005 ABC transporter 18 157 3.2E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS19870 74eb27270e0927eee61881194df4e746 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.4E-109 T 06-07-2017 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 SUPERFAMILY SSF52313 6 235 1.44E-96 T 06-07-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-109 T 06-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 06-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.387 T 06-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 Gene3D G3DSA:1.10.287.610 100 152 4.9E-27 T 06-07-2017 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 Gene3D G3DSA:3.40.50.10490 158 236 1.5E-67 T 06-07-2017 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 Gene3D G3DSA:3.40.50.10490 23 99 1.5E-67 T 06-07-2017 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 06-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LFZ55_RS19320 82fa117145fef8b6a3f2779d71fe197f 241 Pfam PF00318 Ribosomal protein S2 9 224 8.5E-95 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 Gene3D G3DSA:3.20.20.80 100 439 3.9E-80 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 Gene3D G3DSA:3.20.20.80 473 510 3.9E-80 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 Pfam PF11941 Domain of unknown function (DUF3459) 501 585 3.0E-11 T 06-07-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 PIRSF PIRSF006337 6 592 8.2E-225 T 06-07-2017 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 SMART SM00642 112 453 1.3E-9 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 Gene3D G3DSA:2.60.40.10 11 95 2.1E-24 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 Pfam PF00128 Alpha amylase, catalytic domain 130 210 1.8E-14 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 559 1.0E-226 T 06-07-2017 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 SUPERFAMILY SSF81296 9 95 1.54E-15 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS12225 e9855ad81909cd70be0fc2cce601b43d 594 SUPERFAMILY SSF51445 92 512 1.08E-112 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS03000 ebeed73f64cc3d0528672d2c8af268e7 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 3.0E-171 T 06-07-2017 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS03000 ebeed73f64cc3d0528672d2c8af268e7 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 1.8E-8 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 LFZ55_RS03000 ebeed73f64cc3d0528672d2c8af268e7 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 57.292 T 06-07-2017 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 LFZ55_RS17015 4510535fc27dfc1ca8378719eea71df1 188 Gene3D G3DSA:1.10.443.10 4 173 5.6E-40 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS17015 4510535fc27dfc1ca8378719eea71df1 188 SUPERFAMILY SSF56349 4 183 4.12E-43 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS17015 4510535fc27dfc1ca8378719eea71df1 188 Pfam PF00589 Phage integrase family 4 174 2.5E-45 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS07030 9aaac0b24c8f39ee6ed6e35878ec2e8d 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 2.0E-112 T 06-07-2017 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 LFZ55_RS07030 9aaac0b24c8f39ee6ed6e35878ec2e8d 291 Gene3D G3DSA:1.10.3720.10 19 279 1.6E-48 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07030 9aaac0b24c8f39ee6ed6e35878ec2e8d 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 11 275 2.4E-114 T 06-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LFZ55_RS07030 9aaac0b24c8f39ee6ed6e35878ec2e8d 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 1.9E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07030 9aaac0b24c8f39ee6ed6e35878ec2e8d 291 SUPERFAMILY SSF161098 16 268 3.4E-52 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11935 9ae727b138cd412e824df8b16828e1e1 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 1.7E-54 T 06-07-2017 IPR021747 Protein of unknown function DUF3313 LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 SUPERFAMILY SSF55781 95 271 1.9E-47 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 Pfam PF01614 Bacterial transcriptional regulator 144 267 1.2E-39 T 06-07-2017 IPR014757 Transcription regulator IclR, C-terminal LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 SUPERFAMILY SSF46785 24 97 3.26E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 Gene3D G3DSA:1.10.10.10 14 85 8.6E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 SMART SM00346 24 114 1.3E-38 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS22645 4852426193a25b04dd42f00eae911e79 274 Gene3D G3DSA:3.30.450.40 96 271 8.0E-56 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS01830 8d8d6fabe58dbe1f5d2f88711f1ef086 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 2.3E-32 T 06-07-2017 IPR022541 Protein of unknown function DUF2559 LFZ55_RS01830 8d8d6fabe58dbe1f5d2f88711f1ef086 55 ProDom PD026929 YHFG 1 55 7.0E-25 T 06-07-2017 IPR022541 Protein of unknown function DUF2559 LFZ55_RS17545 37a9574542fc1dfdb8a88fe07e0a0097 205 SUPERFAMILY SSF110849 45 175 2.09E-28 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS17545 37a9574542fc1dfdb8a88fe07e0a0097 205 Pfam PF02195 ParB-like nuclease domain 48 141 5.2E-17 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS17545 37a9574542fc1dfdb8a88fe07e0a0097 205 Gene3D G3DSA:3.90.1530.10 44 146 1.2E-14 T 06-07-2017 LFZ55_RS17545 37a9574542fc1dfdb8a88fe07e0a0097 205 SMART SM00470 47 142 2.8E-12 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 62.691 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 3.3E-136 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 SUPERFAMILY SSF56596 5 308 2.09E-127 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 Gene3D G3DSA:3.50.14.10 235 281 5.1E-13 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 Gene3D G3DSA:3.50.14.10 7 219 1.9E-84 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS12855 172b9219ec744bfaee9d9af3d95b978a 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 2.5E-154 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 Gene3D G3DSA:3.30.1400.10 190 324 4.3E-63 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 SMART SM00771 191 320 3.2E-76 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 320 9.4E-108 T 06-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 194 319 2.1E-48 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 322 25.065 T 06-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 SUPERFAMILY SSF64383 192 325 1.16E-49 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LFZ55_RS07090 3fcbcef7272b364b8e10b113e0e34535 328 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 193 328 2.0E-75 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 64 98 1.4E-15 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 140 2.0E-14 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 168 0.19 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.8E-16 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Gene3D G3DSA:3.30.65.10 13 49 1.5E-15 T 06-07-2017 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Gene3D G3DSA:3.30.65.10 64 96 5.0E-13 T 06-07-2017 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 Gene3D G3DSA:3.30.65.10 102 135 1.8E-4 T 06-07-2017 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 SUPERFAMILY SSF57783 12 49 1.24E-13 T 06-07-2017 LFZ55_RS02225 da4951b8735d05ccd019b0cd197d00aa 184 SUPERFAMILY SSF57783 61 99 3.23E-12 T 06-07-2017 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 21 370 4.4E-128 T 06-07-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 Gene3D G3DSA:3.40.50.2000 211 372 9.8E-67 T 06-07-2017 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 5.0E-178 T 06-07-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 Gene3D G3DSA:3.40.50.2000 2 210 2.6E-89 T 06-07-2017 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 SUPERFAMILY SSF53756 2 373 7.14E-143 T 06-07-2017 LFZ55_RS23820 3ca1269f5db142b8bdb1c7d59ef33145 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 65.795 T 06-07-2017 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 Gene3D G3DSA:3.40.50.1100 178 435 8.7E-43 T 06-07-2017 LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 439 272.296 T 06-07-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 SUPERFAMILY SSF53686 93 434 9.6E-53 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 8 435 1.8E-232 T 06-07-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 394 3.0E-56 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS00205 a43ed5163e7f59e00fbb544707fd9217 439 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 106 120 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 Gene3D G3DSA:3.40.190.10 94 179 7.2E-37 T 06-07-2017 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 SUPERFAMILY SSF53850 93 295 1.55E-42 T 06-07-2017 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 Pfam PF03466 LysR substrate binding domain 91 292 1.0E-42 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 Gene3D G3DSA:3.40.190.10 180 258 1.5E-17 T 06-07-2017 LFZ55_RS04530 f000d4531394c04829cd6a422b7395a3 305 Gene3D G3DSA:1.10.10.10 2 88 2.0E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 8.0E-28 T 06-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 Gene3D G3DSA:3.30.1390.10 51 121 4.3E-34 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 SUPERFAMILY SSF54736 50 121 3.84E-25 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 SUPERFAMILY SSF48300 3 57 5.62E-16 T 06-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 4.5E-48 T 06-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 4.1E-31 T 06-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-22 T 06-07-2017 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.469 T 06-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS22800 d7e73127c5f6254a877be5ebb64bdeed 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.6E-15 T 06-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 Pfam PF02810 SEC-C motif 203 220 1.7E-10 T 06-07-2017 IPR004027 SEC-C motif LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 3.9E-34 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 SUPERFAMILY SSF101327 14 181 5.62E-23 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 SUPERFAMILY SSF103642 200 220 6.05E-8 T 06-07-2017 LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 Gene3D G3DSA:3.10.450.50 180 219 6.0E-13 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS09735 df982abaf8d8973cead2536665317626 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 3.2E-51 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 SUPERFAMILY SSF52540 459 687 4.7E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 Pfam PF00664 ABC transporter transmembrane region 157 410 2.8E-9 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 SMART SM00382 492 676 1.3E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 Pfam PF00005 ABC transporter 484 630 3.1E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 Gene3D G3DSA:1.20.1560.10 152 448 2.3E-18 T 06-07-2017 LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 Gene3D G3DSA:3.40.50.300 465 687 8.5E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22375 409481b23cfc3a154e6594aafec9b824 688 SUPERFAMILY SSF90123 148 450 3.4E-25 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS21745 03f882d8bab1f834b6fb5a2dc79e2a5e 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 6.4E-59 T 06-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LFZ55_RS21745 03f882d8bab1f834b6fb5a2dc79e2a5e 153 SUPERFAMILY SSF52540 29 131 1.65E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21745 03f882d8bab1f834b6fb5a2dc79e2a5e 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.3E-42 T 06-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LFZ55_RS21745 03f882d8bab1f834b6fb5a2dc79e2a5e 153 Gene3D G3DSA:3.40.50.300 4 151 2.3E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 132 138 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 PIRSF PIRSF015855 1 651 2.6E-191 T 06-07-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 391 413 3.6E-19 T 06-07-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 414 428 3.6E-19 T 06-07-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 129 141 3.6E-19 T 06-07-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 191 210 3.6E-19 T 06-07-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 Gene3D G3DSA:3.40.50.150 349 501 5.8E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 Gene3D G3DSA:3.40.50.150 105 144 5.8E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 Gene3D G3DSA:3.40.50.150 178 284 5.8E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 Pfam PF01555 DNA methylase 129 449 4.9E-58 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 SUPERFAMILY SSF53335 102 150 1.38E-62 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 SUPERFAMILY SSF53335 364 466 1.38E-62 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS18650 068f5a9d1aee2f8bbe92f79c593fd163 652 SUPERFAMILY SSF53335 179 293 1.38E-62 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24705 5468fa339c2179e686c95f3e6e47ec70 99 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 17 94 6.2E-24 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS24705 5468fa339c2179e686c95f3e6e47ec70 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 70 85 3.7E-6 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS24705 5468fa339c2179e686c95f3e6e47ec70 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 32 47 3.7E-6 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS24705 5468fa339c2179e686c95f3e6e47ec70 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 52 68 3.7E-6 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Pfam PF06958 S-type Pyocin 914 1055 1.5E-39 T 06-07-2017 IPR016128 Pyosin/cloacin translocation domain GO:0009405 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 603 727 3.3E-34 T 06-07-2017 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Pfam PF05954 Phage late control gene D protein (GPD) 33 339 1.1E-59 T 06-07-2017 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Gene3D G3DSA:3.55.50.10 99 192 3.9E-28 T 06-07-2017 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Gene3D G3DSA:2.40.50.230 374 454 4.9E-20 T 06-07-2017 IPR006531 Gp5 N-terminal LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Gene3D G3DSA:3.90.540.10 1058 1197 4.4E-48 T 06-07-2017 IPR024622 Colicin/pyocin, DNase domain GO:0004519 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 474 576 4.1E-33 T 06-07-2017 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 26 497 1.5E-65 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 SUPERFAMILY SSF69279 15 189 1.02E-47 T 06-07-2017 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 SUPERFAMILY SSF54060 1059 1195 7.06E-40 T 06-07-2017 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 500 3.5E-92 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 SUPERFAMILY SSF69369 890 1072 1.96E-34 T 06-07-2017 IPR016128 Pyosin/cloacin translocation domain GO:0009405 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 SUPERFAMILY SSF69255 366 455 2.88E-22 T 06-07-2017 LFZ55_RS12315 f8d808049d3d7776b61bdb967ead9bb1 1198 SUPERFAMILY SSF69279 189 367 4.08E-41 T 06-07-2017 LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.8E-63 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 Gene3D G3DSA:3.40.50.1000 1 73 2.8E-50 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 Gene3D G3DSA:3.40.50.1000 176 272 2.8E-50 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 06-07-2017 LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.2E-67 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS16690 408f9b4f420e62d6d14a662d299df0d1 272 SUPERFAMILY SSF56784 1 271 4.84E-63 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.9E-13 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 Gene3D G3DSA:2.40.50.100 60 94 8.5E-18 T 06-07-2017 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 Gene3D G3DSA:2.40.50.100 215 248 8.5E-18 T 06-07-2017 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 2.5E-145 T 06-07-2017 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 SUPERFAMILY SSF111369 56 107 1.96E-7 T 06-07-2017 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 SUPERFAMILY SSF111369 136 178 1.96E-7 T 06-07-2017 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 SUPERFAMILY SSF111369 194 268 8.24E-8 T 06-07-2017 LFZ55_RS05340 98ccce135696bf99cce47c504b8b9043 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 7.4E-17 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS05265 1d037156921410ce041329e356096373 166 Gene3D G3DSA:1.10.10.10 13 69 1.0E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05265 1d037156921410ce041329e356096373 166 Gene3D G3DSA:1.10.10.10 70 115 1.9E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05265 1d037156921410ce041329e356096373 166 Gene3D G3DSA:1.10.10.10 116 165 2.7E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS05265 1d037156921410ce041329e356096373 166 Hamap MF_01114 Regulatory protein RecX [recX]. 2 166 13.59 T 06-07-2017 IPR003783 Regulatory protein RecX GO:0006282 LFZ55_RS05265 1d037156921410ce041329e356096373 166 Pfam PF02631 RecX family 50 162 1.7E-30 T 06-07-2017 IPR003783 Regulatory protein RecX GO:0006282 LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 Pfam PF03466 LysR substrate binding domain 91 285 7.0E-11 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 SUPERFAMILY SSF46785 8 88 4.19E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 Gene3D G3DSA:3.40.190.10 188 261 1.6E-4 T 06-07-2017 LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 Gene3D G3DSA:1.10.10.10 7 87 7.3E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 SUPERFAMILY SSF53850 104 284 1.63E-13 T 06-07-2017 LFZ55_RS04005 73e4730cf2fc50c9abd64decb44bd8bc 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.2E-11 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.613 T 06-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 236 8.1E-51 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 1.4E-54 T 06-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 06-07-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 SMART SM00934 16 237 4.7E-96 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 SUPERFAMILY SSF51366 14 240 1.66E-76 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS11255 a2087fbf5228339268803335b86657ea 245 Gene3D G3DSA:3.20.20.70 14 240 1.2E-86 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 Pfam PF03466 LysR substrate binding domain 91 296 6.3E-39 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 SUPERFAMILY SSF46785 5 87 2.6E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 Gene3D G3DSA:1.10.10.10 3 85 4.4E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 SUPERFAMILY SSF53850 91 301 1.61E-40 T 06-07-2017 LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 Gene3D G3DSA:3.40.190.10 182 265 4.7E-19 T 06-07-2017 LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.0E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS15880 090c5d04f33b3c7d062b3e08445d6f45 303 Gene3D G3DSA:3.40.190.10 96 181 2.1E-18 T 06-07-2017 LFZ55_RS03785 7218243068533a80f312dda070a262f5 239 SUPERFAMILY SSF53335 18 237 4.52E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03785 7218243068533a80f312dda070a262f5 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.0E-74 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LFZ55_RS03785 7218243068533a80f312dda070a262f5 239 Gene3D G3DSA:3.40.50.150 59 194 6.0E-15 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03785 7218243068533a80f312dda070a262f5 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 29.991 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LFZ55_RS03785 7218243068533a80f312dda070a262f5 239 Pfam PF02390 Putative methyltransferase 64 233 1.1E-60 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.0E-130 T 06-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Gene3D G3DSA:2.40.33.10 77 170 1.7E-27 T 06-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 SUPERFAMILY SSF51621 3 78 9.42E-86 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 SUPERFAMILY SSF51621 160 345 9.42E-86 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Gene3D G3DSA:3.40.1380.20 332 480 4.4E-39 T 06-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 5.8E-29 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 SUPERFAMILY SSF52935 329 479 7.33E-39 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.0E-174 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 06-07-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 9.7E-51 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Gene3D G3DSA:3.20.20.60 6 76 2.3E-93 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS10000 3f0f78570bd10d55c48cddb2bc4e3cbe 480 Gene3D G3DSA:3.20.20.60 172 331 2.3E-93 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 Pfam PF02542 YgbB family 1 154 4.1E-66 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 06-07-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 SUPERFAMILY SSF69765 1 156 1.83E-66 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 Gene3D G3DSA:3.30.1330.50 1 156 2.9E-73 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.243 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS04805 f77860a539f41e770a77b6f31dc77fb9 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.5E-71 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 2.4E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Gene3D G3DSA:1.10.287.130 129 186 1.1E-10 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SUPERFAMILY SSF55785 11 101 7.25E-5 T 06-07-2017 IPR000014 PAS domain LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Gene3D G3DSA:3.30.450.20 11 102 2.1E-18 T 06-07-2017 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SMART SM00387 233 349 8.0E-34 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SUPERFAMILY SSF55874 198 346 6.29E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SMART SM00388 129 194 8.5E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 SMART SM00091 7 75 3.5E-7 T 06-07-2017 IPR000014 PAS domain LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Gene3D G3DSA:3.30.565.10 198 348 1.7E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.4E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.4E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.4E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Pfam PF00989 PAS fold 11 96 3.5E-6 T 06-07-2017 IPR013767 PAS fold GO:0006355 LFZ55_RS23415 31cd150e761ef065dc84411ef7604665 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.0E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS03510 75a527acdb38794c0f40b23d2aa6b74d 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 2.0E-69 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE LFZ55_RS03510 75a527acdb38794c0f40b23d2aa6b74d 162 Pfam PF11939 Protein of unknown function (DUF3457) 12 155 1.7E-45 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE LFZ55_RS03510 75a527acdb38794c0f40b23d2aa6b74d 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 5.9E-51 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 SUPERFAMILY SSF52172 1 125 5.27E-27 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 SUPERFAMILY SSF46894 130 192 1.36E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 Gene3D G3DSA:1.10.10.10 142 192 6.3E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 SMART SM00448 2 112 2.7E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 190 1.3E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 Gene3D G3DSA:3.40.50.2300 1 141 1.5E-31 T 06-07-2017 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.2E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.2E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.2E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00285 5b56d6e136b9231e478f0833cd396f3c 196 SMART SM00421 135 192 1.6E-24 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 1.6E-166 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 Gene3D G3DSA:3.40.309.10 299 476 1.8E-57 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 SUPERFAMILY SSF53720 21 505 4.71E-163 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00825 792cd9bd94d49f73880f28a1f882541a 512 Gene3D G3DSA:3.40.605.10 22 298 3.3E-102 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 Gene3D G3DSA:1.10.580.10 26 250 8.2E-79 T 06-07-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 Gene3D G3DSA:1.10.230.10 251 335 3.4E-27 T 06-07-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PIRSF PIRSF001369 15 389 1.8E-110 T 06-07-2017 IPR024176 Citrate synthase, bacterial-type LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 388 6.4E-167 T 06-07-2017 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 ProSitePatterns PS00480 Citrate synthase signature. 271 283 - T 06-07-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 Pfam PF00285 Citrate synthase, C-terminal domain 22 370 1.8E-115 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 SUPERFAMILY SSF48256 22 382 4.19E-123 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 139 152 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 211 239 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 341 355 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 264 284 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 321 337 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS18590 f8682e133875ff934a64aa0ff2ef3036 389 PRINTS PR00143 Citrate synthase signature 189 204 1.8E-37 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.814 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 Gene3D G3DSA:1.20.58.180 215 298 5.4E-37 T 06-07-2017 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 SUPERFAMILY SSF55681 8 292 4.47E-134 T 06-07-2017 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 7.8E-178 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 6.4E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 6.2E-150 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00935 246bb25728332355cde07f3048220424 303 Gene3D G3DSA:3.30.930.10 4 213 2.5E-106 T 06-07-2017 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 Pfam PF13377 Periplasmic binding protein-like domain 185 349 1.3E-27 T 06-07-2017 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 Pfam PF00356 Bacterial regulatory proteins, lacI family 18 59 1.3E-8 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 SUPERFAMILY SSF53822 86 350 1.67E-38 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 Gene3D G3DSA:1.10.260.40 15 69 1.3E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 SMART SM00354 16 84 7.0E-4 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 Gene3D G3DSA:3.40.50.2300 184 350 1.6E-37 T 06-07-2017 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 SUPERFAMILY SSF47413 16 71 7.78E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS16415 a3f8e1b26cf4699d0e508597f67cf337 379 Gene3D G3DSA:3.40.50.2300 88 183 2.4E-10 T 06-07-2017 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 Gene3D G3DSA:1.10.10.10 1 83 4.7E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 SUPERFAMILY SSF53850 88 287 1.0E-36 T 06-07-2017 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 Gene3D G3DSA:3.40.190.10 88 176 4.4E-25 T 06-07-2017 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 Gene3D G3DSA:3.40.190.10 177 267 2.4E-32 T 06-07-2017 LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 Pfam PF03466 LysR substrate binding domain 87 287 3.8E-44 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 SUPERFAMILY SSF46785 1 83 4.48E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03655 bcc36d4167a01604fbe21d868c982f0b 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-22 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 32 0.0013 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 4.4E-182 T 06-07-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 Gene3D G3DSA:2.60.40.10 424 545 7.1E-32 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 SUPERFAMILY SSF74650 45 422 6.59E-148 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 Gene3D G3DSA:2.70.98.10 44 423 2.0E-161 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 60.09 T 06-07-2017 IPR023724 Glucan biosynthesis, MdoD LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 PIRSF PIRSF006281 1 538 8.6E-203 T 06-07-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D LFZ55_RS11860 edad9df86224da63e3684cfe0d7834f2 551 SUPERFAMILY SSF81296 422 537 1.12E-27 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 SMART SM00357 5 69 9.9E-34 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 7.0E-34 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 Gene3D G3DSA:2.40.50.140 4 68 6.4E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 PIRSF PIRSF002599 1 69 1.5E-26 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS17420 2f60b1ca88ad672eb983217787edf563 69 SUPERFAMILY SSF50249 3 68 5.14E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 9.8E-188 T 06-07-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 06-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 SUPERFAMILY SSF53850 21 326 3.73E-90 T 06-07-2017 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 06-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 7.1E-44 T 06-07-2017 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 Gene3D G3DSA:3.40.190.10 21 164 2.6E-50 T 06-07-2017 LFZ55_RS23140 420d9ba9aa12c05b3de52b9d3f8983fe 329 Gene3D G3DSA:3.40.190.10 173 295 5.0E-32 T 06-07-2017 LFZ55_RS20785 781d7a77d75993b60036273a0e05be88 202 PIRSF PIRSF021719 1 202 1.1E-79 T 06-07-2017 IPR009412 Protein of unknown function DUF1062 LFZ55_RS20785 781d7a77d75993b60036273a0e05be88 202 Pfam PF06353 Protein of unknown function (DUF1062) 36 167 2.4E-41 T 06-07-2017 IPR009412 Protein of unknown function DUF1062 LFZ55_RS19090 da41ae5baab41ad9f8ff95fc33e7a8e7 240 Gene3D G3DSA:3.40.50.150 77 206 9.0E-19 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19090 da41ae5baab41ad9f8ff95fc33e7a8e7 240 Pfam PF08241 Methyltransferase domain 74 125 9.1E-11 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LFZ55_RS19090 da41ae5baab41ad9f8ff95fc33e7a8e7 240 SUPERFAMILY SSF53335 77 207 2.39E-18 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS17385 13da86920be7fd8e1e850f17c58d7dfd 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 9.4E-29 T 06-07-2017 IPR007454 Uncharacterised protein family UPF0250 LFZ55_RS17385 13da86920be7fd8e1e850f17c58d7dfd 87 Gene3D G3DSA:3.30.70.1460 1 87 4.4E-37 T 06-07-2017 IPR027471 YbeD-like domain LFZ55_RS17385 13da86920be7fd8e1e850f17c58d7dfd 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.586 T 06-07-2017 IPR007454 Uncharacterised protein family UPF0250 LFZ55_RS17385 13da86920be7fd8e1e850f17c58d7dfd 87 SUPERFAMILY SSF117991 1 87 3.66E-31 T 06-07-2017 IPR027471 YbeD-like domain LFZ55_RS07140 807b295b90fb81bd6bd59133f3663e46 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 128 2.9E-54 T 06-07-2017 IPR010749 Protein of unknown function DUF1323 LFZ55_RS07140 807b295b90fb81bd6bd59133f3663e46 130 SUPERFAMILY SSF46955 5 81 2.29E-14 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS07140 807b295b90fb81bd6bd59133f3663e46 130 Gene3D G3DSA:1.10.10.10 7 59 7.4E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07140 807b295b90fb81bd6bd59133f3663e46 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 5.0E-52 T 06-07-2017 IPR010749 Protein of unknown function DUF1323 LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.038 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 SUPERFAMILY SSF52374 2 281 4.07E-103 T 06-07-2017 LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 Gene3D G3DSA:3.30.1300.10 181 282 9.3E-29 T 06-07-2017 LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.8E-99 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 Gene3D G3DSA:3.40.50.620 3 176 1.6E-75 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS19460 3ab5670ac642a6346ceaf912efd2ccd8 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 3.0E-119 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Gene3D G3DSA:3.30.70.20 138 172 2.8E-15 T 06-07-2017 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.8E-21 T 06-07-2017 IPR015246 Formate dehydrogenase, transmembrane LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Gene3D G3DSA:3.30.70.20 104 137 2.2E-11 T 06-07-2017 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 SUPERFAMILY SSF54862 28 290 6.07E-73 T 06-07-2017 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 7.7E-146 T 06-07-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Gene3D G3DSA:1.20.5.480 247 294 5.6E-26 T 06-07-2017 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 PIRSF PIRSF036298 1 300 9.8E-166 T 06-07-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 9.5E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Gene3D G3DSA:3.30.70.20 30 103 5.7E-37 T 06-07-2017 LFZ55_RS23285 bc96cde27d35433252218c3103ac9c08 300 Gene3D G3DSA:3.30.70.20 173 227 5.7E-37 T 06-07-2017 LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 2.5E-260 T 06-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 SUPERFAMILY SSF52096 31 181 9.94E-30 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 SUPERFAMILY SSF52096 212 287 9.94E-30 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 328 541 5.1E-53 T 06-07-2017 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Pfam PF01343 Peptidase family S49 392 543 4.3E-50 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Pfam PF01343 Peptidase family S49 141 294 1.4E-42 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Gene3D G3DSA:3.90.226.10 220 316 3.3E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Gene3D G3DSA:3.90.226.10 324 432 7.4E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Gene3D G3DSA:3.90.226.10 469 554 7.4E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 Gene3D G3DSA:3.90.226.10 30 177 3.3E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 SUPERFAMILY SSF52096 468 530 1.89E-42 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 SUPERFAMILY SSF52096 322 440 1.89E-42 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS13725 96fdbd0dbe069d7714b387e635f6bb72 618 PIRSF PIRSF001217 8 618 1.1E-226 T 06-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 SUPERFAMILY SSF52172 1 118 2.7E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 SUPERFAMILY SSF46894 118 217 3.68E-27 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 Gene3D G3DSA:1.10.10.10 124 218 9.1E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 SMART SM00448 1 112 4.4E-35 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.5E-21 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 SMART SM00862 145 216 1.4E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 Pfam PF00072 Response regulator receiver domain 3 113 2.7E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22135 0ad0dd3fd7f85bdc3b11054322b5f815 222 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-35 T 06-07-2017 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.1E-68 T 06-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.1E-97 T 06-07-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Gene3D G3DSA:3.40.1060.10 520 682 2.6E-88 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.6E-39 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Gene3D G3DSA:3.20.19.10 162 361 2.1E-95 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Gene3D G3DSA:3.30.499.10 403 519 6.8E-64 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 PIRSF PIRSF036687 1 859 0.0 T 06-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 06-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 SUPERFAMILY SSF53732 380 859 5.1E-150 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 Gene3D G3DSA:3.30.499.10 684 859 1.2E-55 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 SUPERFAMILY SSF74778 2 160 4.05E-69 T 06-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 SUPERFAMILY SSF52016 162 371 8.11E-72 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS19560 85ae746e80dcbad24cfa44fe44ba9b28 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 Gene3D G3DSA:1.20.58.110 3 87 1.1E-31 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.083 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-36 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 Pfam PF01649 Ribosomal protein S20 2 84 6.2E-28 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 SUPERFAMILY SSF46992 3 86 4.97E-31 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS20120 f302e3adf9ef5ffd533b0cd6018bf926 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.4E-33 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SUPERFAMILY SSF81901 25 77 7.19E-9 T 06-07-2017 LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SUPERFAMILY SSF81901 85 215 5.89E-18 T 06-07-2017 LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SMART SM00671 179 216 0.001 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SMART SM00671 142 177 2.8E-4 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SMART SM00671 35 66 9.1 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 SMART SM00671 67 101 79.0 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 Gene3D G3DSA:1.25.40.10 25 226 7.4E-31 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 Pfam PF08238 Sel1 repeat 143 173 0.001 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 Pfam PF08238 Sel1 repeat 37 66 0.019 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS22245 c32c35b396357dfa003ec5e80a2a9693 229 Pfam PF08238 Sel1 repeat 180 215 5.7E-5 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS04070 127653a4bf90f64d1f2889c1ed87a9eb 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 168 6.4E-13 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS04070 127653a4bf90f64d1f2889c1ed87a9eb 194 SUPERFAMILY SSF101327 9 178 5.36E-53 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS04070 127653a4bf90f64d1f2889c1ed87a9eb 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 179 5.8E-40 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS04070 127653a4bf90f64d1f2889c1ed87a9eb 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 37.395 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 SUPERFAMILY SSF56042 143 308 3.14E-40 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 Gene3D G3DSA:3.90.650.10 146 322 6.0E-53 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 Gene3D G3DSA:3.30.1330.10 3 140 2.1E-45 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 3.9E-21 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 SUPERFAMILY SSF55326 4 137 4.04E-34 T 06-07-2017 LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 296 1.7E-8 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.818 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.3E-116 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 LFZ55_RS18350 feed6d34bea6c935df954bfc17815c51 325 PIRSF PIRSF005303 1 322 3.4E-86 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 1 411 43.75 T 06-07-2017 IPR022969 Chloride channel YfeO LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 Gene3D G3DSA:1.10.3080.10 12 362 3.2E-20 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 Pfam PF00654 Voltage gated chloride channel 86 364 5.3E-21 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 SUPERFAMILY SSF81340 9 398 5.23E-44 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 PRINTS PR00762 Chloride channel signature 103 122 2.4E-7 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 PRINTS PR00762 Chloride channel signature 153 172 2.4E-7 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS07195 9d4c99b772f2df957efb09bf1a633c66 411 PRINTS PR00762 Chloride channel signature 320 340 2.4E-7 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LFZ55_RS03245 dd32de3ce4b097ba55bafc90d7973816 204 SMART SM00287 23 86 3.6E-13 T 06-07-2017 IPR003646 SH3-like domain, bacterial-type LFZ55_RS03245 dd32de3ce4b097ba55bafc90d7973816 204 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 202 2.9E-51 T 06-07-2017 IPR016476 SH3 domain protein LFZ55_RS03245 dd32de3ce4b097ba55bafc90d7973816 204 Pfam PF08239 Bacterial SH3 domain 35 81 1.5E-9 T 06-07-2017 IPR003646 SH3-like domain, bacterial-type LFZ55_RS03245 dd32de3ce4b097ba55bafc90d7973816 204 Gene3D G3DSA:1.20.1170.10 88 183 9.0E-4 T 06-07-2017 LFZ55_RS03245 dd32de3ce4b097ba55bafc90d7973816 204 PIRSF PIRSF006158 1 203 9.4E-70 T 06-07-2017 IPR016476 SH3 domain protein LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-39 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 06-07-2017 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 06-07-2017 IPR005824 KOW LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.6E-23 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.157 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 SUPERFAMILY SSF50104 4 100 3.19E-33 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 Gene3D G3DSA:2.30.30.30 3 92 3.5E-22 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 LFZ55_RS02095 17619cacd8795734f1e7bcc936a920d2 104 SMART SM00739 4 31 9.8E-4 T 06-07-2017 IPR005824 KOW LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 SUPERFAMILY SSF161098 11 265 2.88E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 Gene3D G3DSA:1.10.3720.10 13 267 3.0E-35 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 Gene3D G3DSA:1.10.3720.10 292 532 1.3E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 4.5E-11 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 SUPERFAMILY SSF161098 286 527 1.31E-32 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19865 322bf03bb4628b8e80d7121a484d4f5a 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.4E-277 T 06-07-2017 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 SMART SM00052 408 653 8.2E-108 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Gene3D G3DSA:3.20.20.450 413 656 9.2E-78 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 SUPERFAMILY SSF55073 248 400 5.41E-16 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 SUPERFAMILY SSF141868 413 661 2.75E-75 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Pfam PF00672 HAMP domain 162 229 6.5E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 154 1.0E-51 T 06-07-2017 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Gene3D G3DSA:3.30.70.270 247 404 2.2E-15 T 06-07-2017 LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Pfam PF00563 EAL domain 415 648 1.5E-64 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 394 7.6E-10 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS01125 eeedf50c8676195383081ebfc402f4d7 668 SMART SM00267 231 398 1.2E-30 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS17915 5cb2a4eb4fe04001228a4bc873a46751 204 Gene3D G3DSA:3.40.50.1110 28 202 1.9E-54 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17915 5cb2a4eb4fe04001228a4bc873a46751 204 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 186 4.5E-25 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS17915 5cb2a4eb4fe04001228a4bc873a46751 204 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 06-07-2017 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 LFZ55_RS17915 5cb2a4eb4fe04001228a4bc873a46751 204 SUPERFAMILY SSF52266 28 202 8.6E-51 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 SUPERFAMILY SSF53720 7 429 1.12E-92 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 Gene3D G3DSA:3.40.50.1980 30 240 2.0E-81 T 06-07-2017 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 Pfam PF00815 Histidinol dehydrogenase 28 427 3.3E-165 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.143 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 6.0E-161 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 06-07-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 7.2E-103 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS08885 10a94478d2a5d1571c50a19921535ba4 434 PIRSF PIRSF000099 1 430 3.4E-172 T 06-07-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 Pfam PF00005 ABC transporter 293 436 7.2E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 Pfam PF00005 ABC transporter 28 175 6.6E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 Gene3D G3DSA:3.40.50.300 269 500 4.4E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 Gene3D G3DSA:3.40.50.300 14 243 3.2E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 SUPERFAMILY SSF52540 14 239 9.32E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 SUPERFAMILY SSF52540 268 499 7.93E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 Pfam PF12698 ABC-2 family transporter protein 570 905 7.6E-40 T 06-07-2017 LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 SMART SM00382 301 486 2.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01330 a85500cfb99efd91b892ab37eb6e24ff 913 SMART SM00382 37 225 4.6E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 Gene3D G3DSA:3.40.50.2020 160 284 2.9E-52 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.8E-127 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.752 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 06-07-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 SUPERFAMILY SSF53271 69 306 7.85E-67 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.4E-30 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 Gene3D G3DSA:3.40.50.2020 2 159 3.7E-72 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 06-07-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 LFZ55_RS10855 9345abfa17bfed25372c2eef21741fe4 315 SMART SM01400 4 121 5.7E-76 T 06-07-2017 LFZ55_RS04745 b6c8dce44c4972c14eee44a3a249bc0f 352 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 325 4.6E-124 T 06-07-2017 IPR010148 CRISPR-associated protein, CT1975 LFZ55_RS04745 b6c8dce44c4972c14eee44a3a249bc0f 352 Pfam PF09344 CT1975-like protein 5 339 6.3E-99 T 06-07-2017 IPR010148 CRISPR-associated protein, CT1975 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 1.1E-145 T 06-07-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 Gene3D G3DSA:3.40.50.1100 36 132 1.5E-38 T 06-07-2017 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 7.0E-137 T 06-07-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.6E-69 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 Gene3D G3DSA:3.40.50.1100 133 314 3.9E-72 T 06-07-2017 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 06-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LFZ55_RS07080 ab0357a7110e0af1e34010458db3d197 323 SUPERFAMILY SSF53686 3 317 4.71E-97 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 06-07-2017 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 117 3.7E-31 T 06-07-2017 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 06-07-2017 LFZ55_RS13505 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 3.9E-49 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 54.595 T 06-07-2017 IPR023859 DNA-binding protein, curved-DNA LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 06-07-2017 IPR018253 DnaJ domain, conserved site LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Gene3D G3DSA:2.60.260.20 110 199 3.7E-16 T 06-07-2017 LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 SUPERFAMILY SSF49493 205 285 1.26E-16 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Pfam PF01556 DnaJ C terminal domain 120 276 2.0E-32 T 06-07-2017 IPR002939 Chaperone DnaJ, C-terminal LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Pfam PF00226 DnaJ domain 5 66 1.9E-23 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 SUPERFAMILY SSF49493 114 209 3.92E-15 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 SMART SM00271 4 61 3.0E-26 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 SUPERFAMILY SSF46565 1 105 3.14E-27 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Gene3D G3DSA:2.60.260.20 201 276 2.4E-16 T 06-07-2017 LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 Gene3D G3DSA:1.10.287.110 2 106 3.1E-28 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 PRINTS PR00625 DnaJ domain signature 41 61 2.6E-17 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 PRINTS PR00625 DnaJ domain signature 25 40 2.6E-17 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 PRINTS PR00625 DnaJ domain signature 7 25 2.6E-17 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS14950 2a0ac8f25350d0981b3e24e8337c480f 306 PRINTS PR00625 DnaJ domain signature 61 80 2.6E-17 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS17620 e79ec243f95c545557a757987e1ae7e3 378 SUPERFAMILY SSF160355 64 329 1.83E-82 T 06-07-2017 LFZ55_RS17620 e79ec243f95c545557a757987e1ae7e3 378 Pfam PF02706 Chain length determinant protein 26 155 5.0E-19 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LFZ55_RS17620 e79ec243f95c545557a757987e1ae7e3 378 Gene3D G3DSA:1.10.287.210 213 315 4.5E-45 T 06-07-2017 LFZ55_RS17620 e79ec243f95c545557a757987e1ae7e3 378 Gene3D G3DSA:3.30.1890.10 52 212 7.5E-62 T 06-07-2017 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 SUPERFAMILY SSF54980 393 468 1.58E-17 T 06-07-2017 IPR009022 Elongation factor G, III-V domain LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 06-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Gene3D G3DSA:2.40.30.10 293 394 1.4E-24 T 06-07-2017 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Gene3D G3DSA:3.30.70.870 395 464 3.4E-14 T 06-07-2017 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.3E-46 T 06-07-2017 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.4E-18 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.709 T 06-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 SUPERFAMILY SSF50447 262 393 5.65E-28 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Gene3D G3DSA:3.40.50.300 9 283 2.6E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 7.6E-47 T 06-07-2017 IPR032090 Peptide chain release factor 3, C-terminal LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.4E-11 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS20485 1e25f4114e4eb9d026546f4336bc0714 529 SUPERFAMILY SSF52540 10 277 3.39E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03935 934bc533b41d755aec1a0fbf6065c06a 169 Pfam PF05068 Mannitol repressor 5 167 3.2E-51 T 06-07-2017 IPR007761 Mannitol repressor LFZ55_RS03935 934bc533b41d755aec1a0fbf6065c06a 169 SUPERFAMILY SSF158668 1 167 2.22E-53 T 06-07-2017 LFZ55_RS03935 934bc533b41d755aec1a0fbf6065c06a 169 Gene3D G3DSA:1.20.120.330 2 168 4.5E-62 T 06-07-2017 LFZ55_RS24950 0f13116f457bac5b8ba0b95c7c2a5f29 103 PIRSF PIRSF003259 1 103 5.4E-52 T 06-07-2017 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 LFZ55_RS24950 0f13116f457bac5b8ba0b95c7c2a5f29 103 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 10 102 4.5E-22 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 LFZ55_RS24950 0f13116f457bac5b8ba0b95c7c2a5f29 103 Pfam PF07178 TraL protein 11 102 5.9E-32 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.2E-39 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 1.2E-39 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 1.2E-39 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.2E-39 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 Gene3D G3DSA:2.40.160.20 26 171 8.6E-47 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 SUPERFAMILY SSF56925 27 171 1.23E-33 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS16460 4b942b04e8d47bb9abb8e81ef623e4ae 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 1.9E-23 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SMART SM01240 7 473 0.0 T 06-07-2017 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 Pfam PF00571 CBS domain 153 202 2.2E-4 T 06-07-2017 IPR000644 CBS domain LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 Pfam PF00571 CBS domain 95 140 2.0E-8 T 06-07-2017 IPR000644 CBS domain LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 Gene3D G3DSA:3.20.20.70 2 485 6.7E-194 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 PIRSF PIRSF000130 1 487 3.8E-197 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SUPERFAMILY SSF54631 94 203 1.52E-24 T 06-07-2017 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SUPERFAMILY SSF51412 217 477 1.7E-127 T 06-07-2017 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SUPERFAMILY SSF51412 1 90 1.7E-127 T 06-07-2017 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 06-07-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SMART SM00116 96 144 7.3E-10 T 06-07-2017 IPR000644 CBS domain LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 SMART SM00116 158 206 2.2E-8 T 06-07-2017 IPR000644 CBS domain LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 7.5E-162 T 06-07-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.2E-200 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS06315 a010555b6c67d0d5138c89fcf69fbaed 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.117 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 475 9.1E-89 T 06-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Pfam PF02321 Outer membrane efflux protein 294 445 4.6E-12 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Pfam PF02321 Outer membrane efflux protein 67 266 4.8E-20 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 SUPERFAMILY SSF56954 5 476 3.92E-79 T 06-07-2017 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Gene3D G3DSA:2.20.200.10 325 360 3.0E-16 T 06-07-2017 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Gene3D G3DSA:2.20.200.10 104 153 3.0E-16 T 06-07-2017 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Gene3D G3DSA:1.20.1600.10 362 475 1.3E-66 T 06-07-2017 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Gene3D G3DSA:1.20.1600.10 154 324 1.3E-66 T 06-07-2017 LFZ55_RS08405 cb9fc275ab50b256b4dac23ad609c9df 478 Gene3D G3DSA:1.20.1600.10 53 93 1.3E-66 T 06-07-2017 LFZ55_RS21670 f39096da1b44285990a861f00427ab1c 69 Pfam PF10679 Protein of unknown function (DUF2491) 2 67 5.5E-14 T 06-07-2017 IPR019621 Protein of unknown function DUF2491 LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 Gene3D G3DSA:2.40.440.10 96 242 1.2E-34 T 06-07-2017 LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 Gene3D G3DSA:3.10.350.10 53 91 1.2E-6 T 06-07-2017 IPR018392 LysM domain LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 SMART SM00257 45 91 4.5E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 4.6E-20 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 SUPERFAMILY SSF141523 101 240 1.27E-28 T 06-07-2017 LFZ55_RS14190 6628ff9c49e0ded9fb05b80d69d9295f 321 Pfam PF01476 LysM domain 48 91 4.1E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 2.9E-84 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 Gene3D G3DSA:3.10.310.10 1 125 1.6E-41 T 06-07-2017 LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 5.1E-115 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 PIRSF PIRSF016184 1 295 9.7E-89 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 Gene3D G3DSA:3.10.310.10 128 284 1.2E-45 T 06-07-2017 LFZ55_RS12110 b1fa3689fb6d94249f3e2976c19d53cf 297 SUPERFAMILY SSF54506 1 294 2.06E-65 T 06-07-2017 LFZ55_RS16075 d1e3a1f8100459aff988053f84abac1c 240 SUPERFAMILY SSF55469 1 239 1.83E-72 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS16075 d1e3a1f8100459aff988053f84abac1c 240 PIRSF PIRSF005426 1 240 2.9E-83 T 06-07-2017 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 LFZ55_RS16075 d1e3a1f8100459aff988053f84abac1c 240 Gene3D G3DSA:3.40.109.10 2 239 5.8E-74 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS16075 d1e3a1f8100459aff988053f84abac1c 240 Pfam PF00881 Nitroreductase family 11 159 1.4E-17 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LFZ55_RS02690 91e0f3c54cafbbce07ea7041d06a1c57 95 Gene3D G3DSA:1.10.260.40 4 72 4.3E-38 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS02690 91e0f3c54cafbbce07ea7041d06a1c57 95 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.8E-35 T 06-07-2017 LFZ55_RS02690 91e0f3c54cafbbce07ea7041d06a1c57 95 SUPERFAMILY SSF47413 3 72 9.56E-29 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS00600 632793c0324ff4c7072e4d34fcf97539 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.158 T 06-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS00600 632793c0324ff4c7072e4d34fcf97539 78 Gene3D G3DSA:2.30.170.40 2 77 3.6E-35 T 06-07-2017 LFZ55_RS00600 632793c0324ff4c7072e4d34fcf97539 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 9.5E-28 T 06-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS00600 632793c0324ff4c7072e4d34fcf97539 78 Pfam PF00830 Ribosomal L28 family 3 62 7.8E-26 T 06-07-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS00600 632793c0324ff4c7072e4d34fcf97539 78 SUPERFAMILY SSF143800 1 77 9.81E-30 T 06-07-2017 LFZ55_RS03475 dee54bd0679cb8b0c90bb018e437968f 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 3.2E-42 T 06-07-2017 IPR022574 Protein of unknown function DUF2623 LFZ55_RS03475 dee54bd0679cb8b0c90bb018e437968f 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 94 2.0E-48 T 06-07-2017 IPR022574 Protein of unknown function DUF2623 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 Gene3D G3DSA:1.10.10.10 183 240 2.3E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 2.8E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 2.8E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 2.8E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 SUPERFAMILY SSF75516 8 169 1.18E-34 T 06-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 SMART SM00421 177 234 1.0E-18 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 Pfam PF03472 Autoinducer binding domain 22 160 3.4E-33 T 06-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 SUPERFAMILY SSF46894 165 240 5.1E-18 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 5.3E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS09670 e59b066b2485903f0e74aea4a721d6dc 240 Gene3D G3DSA:3.30.450.80 7 182 4.1E-41 T 06-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 SMART SM00271 202 267 2.7E-16 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 Gene3D G3DSA:1.10.3680.10 22 203 3.2E-26 T 06-07-2017 IPR029024 TerB-like LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 PRINTS PR00625 DnaJ domain signature 223 238 1.1E-7 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 PRINTS PR00625 DnaJ domain signature 247 267 1.1E-7 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 PRINTS PR00625 DnaJ domain signature 205 223 1.1E-7 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 Pfam PF00226 DnaJ domain 206 264 6.7E-11 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 Gene3D G3DSA:1.10.287.110 204 265 4.4E-14 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 Pfam PF05099 Tellurite resistance protein TerB 47 170 1.2E-9 T 06-07-2017 IPR007791 Co-chaperone DjlA, N-terminal LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 268 39.033 T 06-07-2017 IPR023749 Co-chaperone DjlA GO:0051087 LFZ55_RS19925 68834e2949634a4a17a394ec2d3e5d7c 269 SUPERFAMILY SSF46565 131 265 1.99E-31 T 06-07-2017 IPR001623 DnaJ domain LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 573 588 1.4E-23 T 06-07-2017 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 402 421 1.4E-23 T 06-07-2017 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 609 621 1.4E-23 T 06-07-2017 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 556 571 1.4E-23 T 06-07-2017 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 SUPERFAMILY SSF55594 1 87 5.36E-16 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 SUPERFAMILY SSF55804 685 826 6.93E-30 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 SUPERFAMILY SSF51621 363 657 6.54E-100 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 161 675 1.6E-146 T 06-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 365 650 1.2E-106 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Gene3D G3DSA:1.10.274.10 149 238 1.2E-19 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 SUPERFAMILY SSF52009 233 348 3.27E-19 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 687 826 5.6E-31 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Pfam PF00381 PTS HPr component phosphorylation site 6 83 1.0E-10 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Pfam PF05524 PEP-utilising enzyme, N-terminal 148 234 1.7E-11 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 556 574 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Pfam PF00391 PEP-utilising enzyme, mobile domain 263 334 1.1E-12 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Gene3D G3DSA:3.40.930.10 681 827 2.6E-39 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Gene3D G3DSA:3.20.20.60 367 680 2.2E-105 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 688 812 9.9E-39 T 06-07-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Gene3D G3DSA:3.30.1340.10 1 87 2.5E-19 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 Gene3D G3DSA:3.50.30.10 239 361 5.0E-23 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07225 bd53bb1c72bf65be80b151a26f6be809 831 SUPERFAMILY SSF47831 145 247 1.26E-17 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS15560 b7a3987fc98c1396689baf48a548df18 586 SUPERFAMILY SSF54211 347 542 2.16E-33 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS15560 b7a3987fc98c1396689baf48a548df18 586 Pfam PF13654 AAA domain 140 300 8.9E-20 T 06-07-2017 LFZ55_RS15560 b7a3987fc98c1396689baf48a548df18 586 Gene3D G3DSA:3.30.230.10 340 541 4.0E-32 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS15560 b7a3987fc98c1396689baf48a548df18 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 540 1.7E-10 T 06-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LFZ55_RS14125 07dfd8e2ed0f3d455b0159806a145d3a 373 SMART SM00558 92 215 1.9E-11 T 06-07-2017 IPR003347 JmjC domain LFZ55_RS14125 07dfd8e2ed0f3d455b0159806a145d3a 373 SUPERFAMILY SSF51197 7 292 1.07E-73 T 06-07-2017 LFZ55_RS14125 07dfd8e2ed0f3d455b0159806a145d3a 373 Gene3D G3DSA:2.60.120.650 7 206 6.3E-44 T 06-07-2017 LFZ55_RS14125 07dfd8e2ed0f3d455b0159806a145d3a 373 Pfam PF08007 Cupin superfamily protein 10 309 5.7E-103 T 06-07-2017 IPR003347 JmjC domain LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 SUPERFAMILY SSF46689 249 299 3.32E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 Gene3D G3DSA:1.10.10.60 198 251 1.4E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 SMART SM00342 213 296 1.5E-29 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 SUPERFAMILY SSF46689 197 247 9.45E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 Gene3D G3DSA:1.10.10.60 252 294 1.2E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 Pfam PF12833 Helix-turn-helix domain 219 294 3.5E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS03415 02d5acfe6d1b359c0f7b12aedbc9f261 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 34 184 1.7E-37 T 06-07-2017 IPR009594 Transcription regulator HTH, AraC, N-terminal LFZ55_RS16790 31652bdeb8e3dd9f080247d7d24a5f11 128 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 45 128 4.0E-30 T 06-07-2017 IPR020363 Uncharacterised protein family YbgS LFZ55_RS16790 31652bdeb8e3dd9f080247d7d24a5f11 128 Pfam PF13985 YbgS-like protein 3 128 3.0E-55 T 06-07-2017 IPR020363 Uncharacterised protein family YbgS LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 SUPERFAMILY SSF56784 3 239 6.79E-59 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 Gene3D G3DSA:3.40.50.1000 100 239 7.8E-46 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 36.646 T 06-07-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 1.5E-11 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 3.2E-98 T 06-07-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 209 5.1E-14 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 Gene3D G3DSA:1.10.150.240 22 99 1.0E-26 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 1.4E-36 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 4.5E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 4.5E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.5E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01780 448bba3faa4b48b10ce8e624df7e0f3c 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 4.5E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS11380 ba7fc73ad5348f41f7a12aee04b4139f 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.5E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11380 ba7fc73ad5348f41f7a12aee04b4139f 321 SUPERFAMILY SSF161098 70 138 1.96E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11380 ba7fc73ad5348f41f7a12aee04b4139f 321 SUPERFAMILY SSF161098 178 300 1.96E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11380 ba7fc73ad5348f41f7a12aee04b4139f 321 Gene3D G3DSA:1.10.3720.10 181 305 1.9E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11380 ba7fc73ad5348f41f7a12aee04b4139f 321 Gene3D G3DSA:1.10.3720.10 72 141 1.9E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS04565 8d6d961c51a6ec1bf3a78efa0b4c3976 438 Gene3D G3DSA:1.20.1250.20 28 233 2.6E-19 T 06-07-2017 LFZ55_RS04565 8d6d961c51a6ec1bf3a78efa0b4c3976 438 SUPERFAMILY SSF103473 18 431 6.54E-44 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS04565 8d6d961c51a6ec1bf3a78efa0b4c3976 438 Pfam PF07690 Major Facilitator Superfamily 33 379 3.2E-19 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS04565 8d6d961c51a6ec1bf3a78efa0b4c3976 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 432 1.2E-197 T 06-07-2017 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 LFZ55_RS04565 8d6d961c51a6ec1bf3a78efa0b4c3976 438 Gene3D G3DSA:1.20.1250.20 255 431 6.4E-6 T 06-07-2017 LFZ55_RS03515 eb32646c640685f952d7a849e21c9925 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 3.5E-43 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS03515 eb32646c640685f952d7a849e21c9925 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.231 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS03515 eb32646c640685f952d7a849e21c9925 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 06-07-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site LFZ55_RS03515 eb32646c640685f952d7a849e21c9925 113 PIRSF PIRSF004761 1 113 3.2E-37 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS03515 eb32646c640685f952d7a849e21c9925 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.6E-32 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SUPERFAMILY SSF55874 4 220 4.85E-77 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Gene3D G3DSA:3.30.565.10 15 218 8.3E-93 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 116.162 T 06-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 9.3E-71 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SMART SM00387 31 175 2.2E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SUPERFAMILY SSF56719 730 795 1.46E-86 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SUPERFAMILY SSF56719 394 560 1.46E-86 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS00020 be964a306884840a93784fe657bde664 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 06-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Gene3D G3DSA:3.40.50.670 404 550 2.0E-101 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Gene3D G3DSA:3.40.50.670 718 786 2.0E-101 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Pfam PF00204 DNA gyrase B 221 390 2.2E-59 T 06-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.7E-23 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Gene3D G3DSA:3.30.230.10 220 392 7.6E-79 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Pfam PF01751 Toprim domain 419 531 4.0E-18 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS00020 be964a306884840a93784fe657bde664 804 SMART SM00433 35 797 2.5E-283 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 06-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 6.8E-30 T 06-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS00020 be964a306884840a93784fe657bde664 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.5E-80 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LFZ55_RS03235 33e20e6440f459af07be048efac4a5df 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.0E-83 T 06-07-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LFZ55_RS03235 33e20e6440f459af07be048efac4a5df 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 8.3E-109 T 06-07-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LFZ55_RS03235 33e20e6440f459af07be048efac4a5df 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.849 T 06-07-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 Gene3D G3DSA:3.40.50.10490 97 270 3.1E-40 T 06-07-2017 LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 Pfam PF01380 SIS domain 124 252 4.8E-28 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.8E-29 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 SUPERFAMILY SSF53697 94 277 6.88E-43 T 06-07-2017 LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 Gene3D G3DSA:1.10.10.10 1 80 2.1E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10005 908902bd93e95a4c90bc0951984b7241 289 SUPERFAMILY SSF46689 1 80 9.14E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 Pfam PF03641 Possible lysine decarboxylase 190 329 7.0E-34 T 06-07-2017 IPR031100 LOG family LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 SUPERFAMILY SSF102405 119 330 2.14E-42 T 06-07-2017 LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 Gene3D G3DSA:3.30.1850.10 2 113 4.9E-54 T 06-07-2017 IPR027820 Domain of unknown function DUF4478 LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 Gene3D G3DSA:3.40.50.450 125 452 4.1E-124 T 06-07-2017 LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 1.0E-54 T 06-07-2017 IPR021826 Protein of unknown function DUF3412 LFZ55_RS04595 4c7bd856d108214360bd9a00ddbfce90 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 4.0E-46 T 06-07-2017 IPR027820 Domain of unknown function DUF4478 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 9.5E-16 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 Gene3D G3DSA:3.10.290.10 3 62 2.6E-15 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 SUPERFAMILY SSF55174 5 98 9.57E-14 T 06-07-2017 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 6.7E-64 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 Pfam PF01479 S4 domain 4 43 4.5E-12 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 SUPERFAMILY SSF55120 69 234 6.78E-43 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS11175 ea63b0d7cdb620b3faf683b633970f3e 291 SMART SM00363 3 74 2.8E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS00635 cb6276f1c19630eee05f6dde85345df5 265 PIRSF PIRSF037318 1 265 1.5E-167 T 06-07-2017 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 LFZ55_RS00635 cb6276f1c19630eee05f6dde85345df5 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 9.0E-65 T 06-07-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 LFZ55_RS00635 cb6276f1c19630eee05f6dde85345df5 265 SUPERFAMILY SSF56112 43 201 2.96E-7 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS16750 b40a69b63fe6f084671ee80b7f69e9bc 248 SUPERFAMILY SSF88713 1 248 5.56E-71 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS16750 b40a69b63fe6f084671ee80b7f69e9bc 248 Pfam PF04794 YdjC-like protein 5 235 4.0E-53 T 06-07-2017 IPR006879 Chitooligosaccharide deacetylase ChbG-like LFZ55_RS16750 b40a69b63fe6f084671ee80b7f69e9bc 248 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 245 36.235 T 06-07-2017 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 LFZ55_RS16750 b40a69b63fe6f084671ee80b7f69e9bc 248 Gene3D G3DSA:3.20.20.370 1 248 1.3E-74 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS16980 eb464db4eda8bb4dc5132845fe7b0303 236 SUPERFAMILY SSF52540 45 235 1.77E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16980 eb464db4eda8bb4dc5132845fe7b0303 236 Pfam PF00005 ABC transporter 48 180 8.4E-16 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16980 eb464db4eda8bb4dc5132845fe7b0303 236 SMART SM00382 57 231 1.2E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16980 eb464db4eda8bb4dc5132845fe7b0303 236 Gene3D G3DSA:3.40.50.300 44 234 1.6E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18555 85f966b4626157afc229bc2f7e496108 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.6E-164 T 06-07-2017 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 LFZ55_RS18555 85f966b4626157afc229bc2f7e496108 406 SUPERFAMILY SSF90123 77 389 2.06E-8 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS24895 b6c90e219ee457a1a6e03e48b47c00e9 128 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 20 124 2.2E-40 T 06-07-2017 IPR014115 Type-F conjugative transfer system protein TrbI LFZ55_RS24895 b6c90e219ee457a1a6e03e48b47c00e9 128 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 14 125 2.0E-57 T 06-07-2017 IPR014115 Type-F conjugative transfer system protein TrbI LFZ55_RS08375 1b1769346d238688c5065390b3041114 211 Gene3D G3DSA:2.60.120.10 78 211 1.1E-27 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS08375 1b1769346d238688c5065390b3041114 211 Gene3D G3DSA:2.60.120.10 2 67 6.3E-18 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS08375 1b1769346d238688c5065390b3041114 211 SUPERFAMILY SSF51182 2 209 2.4E-61 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 SUPERFAMILY SSF51445 4 471 1.11E-155 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Gene3D G3DSA:2.60.40.1180 475 548 2.3E-22 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 SUPERFAMILY SSF51011 474 548 1.88E-19 T 06-07-2017 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Pfam PF00128 Alpha amylase, catalytic domain 29 371 3.8E-125 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 SMART SM00642 14 413 9.5E-155 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Gene3D G3DSA:3.90.400.10 106 174 5.0E-30 T 06-07-2017 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Gene3D G3DSA:3.20.20.80 175 472 1.8E-125 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Gene3D G3DSA:3.20.20.80 4 105 1.8E-125 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 6 548 3.8E-263 T 06-07-2017 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 LFZ55_RS21330 137388eb6e4c1d50b3f3c056e8a795f3 550 Pfam PF11941 Domain of unknown function (DUF3459) 458 547 1.1E-10 T 06-07-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 SUPERFAMILY SSF55811 5 126 2.3E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.3E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.3E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 Pfam PF00293 NUDIX domain 7 126 3.8E-20 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS13685 1a9d451b25a676776f6665ec853825dd 138 Gene3D G3DSA:3.90.79.10 6 128 2.6E-34 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 PIRSF PIRSF500176 22 348 3.8E-82 T 06-07-2017 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 06-07-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 Gene3D G3DSA:3.40.50.1170 23 230 3.0E-75 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 SUPERFAMILY SSF53774 23 347 4.32E-109 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 8.3E-23 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 8.3E-23 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 8.3E-23 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 Pfam PF00710 Asparaginase, N-terminal 25 216 9.1E-63 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 Gene3D G3DSA:3.40.50.40 235 346 2.9E-41 T 06-07-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 06-07-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 7.0E-167 T 06-07-2017 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 SMART SM00870 25 342 4.8E-146 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS03800 e77bdb304af28d4b1b770ea677fe4363 348 PIRSF PIRSF001220 21 348 4.7E-93 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 Gene3D G3DSA:3.30.160.20 153 223 9.3E-29 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.621 T 06-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 Gene3D G3DSA:1.10.1520.10 6 148 1.4E-48 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.5E-74 T 06-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 SMART SM00535 21 149 1.7E-59 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.2E-33 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 SUPERFAMILY SSF54768 109 223 1.35E-27 T 06-07-2017 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.3E-14 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 SUPERFAMILY SSF69065 5 159 5.93E-50 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LFZ55_RS05995 66331ac506f8634fea6e4c91dac88596 226 SMART SM00358 156 224 1.6E-23 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 30.278 T 06-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 6.2E-63 T 06-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 SUPERFAMILY SSF51366 1 251 9.06E-83 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.067 T 06-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 06-07-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Gene3D G3DSA:3.20.20.70 1 258 1.6E-102 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Gene3D G3DSA:3.20.20.70 259 445 1.1E-62 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.1E-96 T 06-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 LFZ55_RS11145 fe193a980ff08f547332bde40f52e316 452 SUPERFAMILY SSF51366 257 450 6.75E-58 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS06955 59a863a07a33ed544bca90f1a4bf128b 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 8.8E-178 T 06-07-2017 IPR009377 Ethanolamine utilisation EutA LFZ55_RS06955 59a863a07a33ed544bca90f1a4bf128b 467 SUPERFAMILY SSF53067 8 315 7.35E-10 T 06-07-2017 LFZ55_RS06955 59a863a07a33ed544bca90f1a4bf128b 467 Gene3D G3DSA:3.30.420.40 229 265 1.0E-7 T 06-07-2017 LFZ55_RS06955 59a863a07a33ed544bca90f1a4bf128b 467 Gene3D G3DSA:3.30.420.40 147 178 1.0E-7 T 06-07-2017 LFZ55_RS06955 59a863a07a33ed544bca90f1a4bf128b 467 PIRSF PIRSF012293 2 467 1.2E-206 T 06-07-2017 IPR009377 Ethanolamine utilisation EutA LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 1.4E-46 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 255 1.8E-98 T 06-07-2017 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 Gene3D G3DSA:3.30.950.10 118 237 1.3E-39 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 Gene3D G3DSA:3.40.1010.10 9 117 4.9E-33 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09100 7e584b64e291cf1c54fcb0f9a81b96ae 257 SUPERFAMILY SSF53790 7 255 3.53E-69 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS19840 c6c1a7a1c092f899f9812a275ecec777 392 Pfam PF07690 Major Facilitator Superfamily 19 344 6.7E-26 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS19840 c6c1a7a1c092f899f9812a275ecec777 392 SUPERFAMILY SSF103473 14 388 1.44E-45 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS19840 c6c1a7a1c092f899f9812a275ecec777 392 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 1.5E-169 T 06-07-2017 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 LFZ55_RS19840 c6c1a7a1c092f899f9812a275ecec777 392 Gene3D G3DSA:1.20.1250.20 214 389 2.2E-20 T 06-07-2017 LFZ55_RS19840 c6c1a7a1c092f899f9812a275ecec777 392 Gene3D G3DSA:1.20.1250.20 16 198 5.9E-18 T 06-07-2017 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Pfam PF04542 Sigma-70 region 2 94 163 3.3E-21 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 5.5E-35 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Gene3D G3DSA:1.10.601.10 49 163 6.4E-54 T 06-07-2017 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 4.4E-145 T 06-07-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 40.01 T 06-07-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Gene3D G3DSA:1.10.10.10 257 322 2.4E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 3.0E-11 T 06-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 SUPERFAMILY SSF88659 225 323 1.46E-23 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Pfam PF04545 Sigma-70, region 4 262 315 1.8E-15 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04830 7c19736d8895724e9657e5cf36aa484c 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 SUPERFAMILY SSF52016 421 610 2.35E-60 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 Pfam PF00920 Dehydratase family 34 607 6.9E-218 T 06-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 SUPERFAMILY SSF143975 3 420 2.09E-134 T 06-07-2017 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.289 T 06-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.3E-271 T 06-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS23905 db822c894c15853807ae3a06018a6d09 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS01890 d1b732e176c091f684b1ad0946dcee57 296 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 276 3.7E-69 T 06-07-2017 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS01890 d1b732e176c091f684b1ad0946dcee57 296 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 296 152.02 T 06-07-2017 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS01890 d1b732e176c091f684b1ad0946dcee57 296 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 279 3.6E-93 T 06-07-2017 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 11 33 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 Gene3D G3DSA:3.40.50.720 4 104 4.3E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 71 133 1.3E-5 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2 101 3.1E-38 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 40 56 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LFZ55_RS00965 37cd74aec7275584659498949f7e0143 138 SUPERFAMILY SSF51735 3 102 1.29E-34 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Gene3D G3DSA:3.40.50.300 184 359 7.9E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Pfam PF01590 GAF domain 23 152 2.9E-9 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 SMART SM00382 207 350 2.3E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Gene3D G3DSA:1.10.10.60 411 504 2.4E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Gene3D G3DSA:3.30.450.40 8 167 4.5E-13 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Pfam PF00158 Sigma-54 interaction domain 187 353 2.1E-66 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 505 62.177 T 06-07-2017 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 SUPERFAMILY SSF46689 454 504 7.17E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 Gene3D G3DSA:1.10.8.60 360 410 1.3E-19 T 06-07-2017 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 SUPERFAMILY SSF52540 187 421 3.94E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 SMART SM00065 20 167 7.6E-18 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS05210 f1d716ae9496bbf2957336c1544b0a42 506 SUPERFAMILY SSF55781 22 170 9.38E-16 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS19930 978321749e9bbcdde726bbfc73146dd3 786 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 765 21.405 T 06-07-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 LFZ55_RS19930 978321749e9bbcdde726bbfc73146dd3 786 Gene3D G3DSA:2.60.450.10 47 209 5.4E-26 T 06-07-2017 LFZ55_RS19930 978321749e9bbcdde726bbfc73146dd3 786 Pfam PF04453 Organic solvent tolerance protein 309 699 2.6E-112 T 06-07-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 LFZ55_RS19930 978321749e9bbcdde726bbfc73146dd3 786 Pfam PF03968 OstA-like protein 53 194 3.3E-29 T 06-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal LFZ55_RS06360 b50a767197aa8de7987aa9f32e150249 273 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 21 254 3.0E-24 T 06-07-2017 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain LFZ55_RS06605 b50a767197aa8de7987aa9f32e150249 273 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 21 254 3.0E-24 T 06-07-2017 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain LFZ55_RS24425 00187961b5a6c30e725aba26c006b60b 404 Pfam PF03090 Replicase family 36 162 3.4E-49 T 06-07-2017 IPR004322 Plasmid replicase, bacterial LFZ55_RS24425 00187961b5a6c30e725aba26c006b60b 404 Pfam PF08708 Primase C terminal 1 (PriCT-1) 177 252 8.9E-19 T 06-07-2017 IPR014820 Primase, C-terminal 1 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 SUPERFAMILY SSF51998 4 759 3.97E-296 T 06-07-2017 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 06-07-2017 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 1.1E-207 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 Pfam PF01228 Glycine radical 630 741 1.4E-43 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 PIRSF PIRSF000379 8 760 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS15765 1d916f0554b61ff5473c6af9b0d73b24 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 Gene3D G3DSA:3.10.129.10 4 116 4.0E-50 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.2E-102 T 06-07-2017 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 Pfam PF13622 Thioesterase-like superfamily 32 282 1.4E-56 T 06-07-2017 LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 SUPERFAMILY SSF54637 4 114 8.2E-43 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 Gene3D G3DSA:3.10.129.10 126 284 5.0E-55 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS18140 0dababec98f5b1799258a87ac629e208 286 SUPERFAMILY SSF54637 116 284 6.98E-57 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Gene3D G3DSA:3.80.10.10 166 334 1.0E-35 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 397 416 5.8 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 317 336 0.15 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 217 236 140.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 357 376 5.3 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 77 96 0.32 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 117 136 240.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 237 256 2.8 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 337 356 0.97 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 257 276 3.5 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 137 156 1.2 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 417 436 7.3 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 157 176 12.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 277 296 190.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 97 116 39.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 177 196 12.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 377 396 0.034 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 197 216 0.017 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 437 456 0.025 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SMART SM00364 57 76 340.0 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SUPERFAMILY SSF52058 284 464 2.27E-22 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 489 698 4.6E-49 T 06-07-2017 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Gene3D G3DSA:1.20.58.360 560 695 5.1E-38 T 06-07-2017 LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Pfam PF12468 Type III secretion system leucine rich repeat protein 15 50 1.6E-6 T 06-07-2017 IPR032674 LRR-containing bacterial E3 ligase, N-terminal LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 SUPERFAMILY SSF52058 60 302 2.52E-32 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Gene3D G3DSA:3.80.10.10 63 165 3.5E-20 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Gene3D G3DSA:3.80.10.10 336 464 2.5E-23 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14870 a7570822547fac5e3db205cf64ac8b02 778 Gene3D G3DSA:1.20.1270.130 480 556 1.3E-19 T 06-07-2017 LFZ55_RS14485 5ce8df259491c9f277ad9ec00c9acbd3 191 Gene3D G3DSA:2.40.128.110 22 190 1.3E-62 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS14485 5ce8df259491c9f277ad9ec00c9acbd3 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 47.248 T 06-07-2017 IPR023480 Uncharacterised protein family UPF0312/YceI LFZ55_RS14485 5ce8df259491c9f277ad9ec00c9acbd3 191 Pfam PF04264 YceI-like domain 25 186 3.3E-43 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS14485 5ce8df259491c9f277ad9ec00c9acbd3 191 SMART SM00867 24 188 6.6E-74 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS14485 5ce8df259491c9f277ad9ec00c9acbd3 191 SUPERFAMILY SSF101874 22 190 2.49E-57 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 Gene3D G3DSA:3.30.420.40 4 204 1.0E-9 T 06-07-2017 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 Hamap MF_00020 Acetate kinase [ackA]. 1 396 176.622 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 TIGRFAM TIGR00016 ackA: acetate kinase 3 392 8.0E-154 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 SUPERFAMILY SSF53067 157 392 7.08E-87 T 06-07-2017 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 Pfam PF00871 Acetokinase family 5 387 3.9E-147 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 203 224 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 300 313 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 173 186 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 5 16 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 374 386 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PRINTS PR00471 Acetate kinase family signature 322 338 1.1E-42 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 Gene3D G3DSA:3.30.420.40 205 392 1.3E-77 T 06-07-2017 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 Hamap MF_01882 Probable propionate kinase [pduW]. 1 392 71.491 T 06-07-2017 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 PIRSF PIRSF000722 1 395 2.7E-146 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 SUPERFAMILY SSF53067 4 195 2.72E-65 T 06-07-2017 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS08960 ce5993a1fa22a2f7383ca223d93bff0f 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 SUPERFAMILY SSF118215 28 431 3.79E-84 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 Gene3D G3DSA:1.10.3860.10 23 435 6.2E-82 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 386 406 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 26 46 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 71 91 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 101 126 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 172 194 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 PRINTS PR00173 Glutamate-aspartate symporter signature 359 378 1.1E-21 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13380 ca56ff4252786a25297c2e0bf7e71049 448 Pfam PF00375 Sodium:dicarboxylate symporter family 29 431 5.1E-93 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS23220 721584a28ad029985d89a1cfb5ee9916 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 31.508 T 06-07-2017 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 LFZ55_RS23220 721584a28ad029985d89a1cfb5ee9916 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 1.5E-55 T 06-07-2017 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 LFZ55_RS23220 721584a28ad029985d89a1cfb5ee9916 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 3.3E-28 T 06-07-2017 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 LFZ55_RS23220 721584a28ad029985d89a1cfb5ee9916 104 SUPERFAMILY SSF54909 1 103 1.76E-36 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 SUPERFAMILY SSF103473 9 201 4.19E-44 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 Pfam PF07690 Major Facilitator Superfamily 18 261 2.6E-35 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 23 39 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 311 331 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 142 164 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 112 133 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 85 109 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 PRINTS PR01035 Tetracycline resistance protein signature 346 369 1.5E-12 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 53.613 T 06-07-2017 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 SUPERFAMILY SSF103473 215 397 3.27E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 Gene3D G3DSA:1.20.1250.20 11 196 9.1E-41 T 06-07-2017 LFZ55_RS14505 5df639b02335222054c63dd297ab7b51 404 Gene3D G3DSA:1.20.1250.20 208 394 4.2E-29 T 06-07-2017 LFZ55_RS22580 5420561fac3acc0d0668da22039c02c8 212 SUPERFAMILY SSF159270 20 209 1.83E-55 T 06-07-2017 IPR023373 YmcC-like domain LFZ55_RS22580 5420561fac3acc0d0668da22039c02c8 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 206 2.0E-59 T 06-07-2017 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB LFZ55_RS22580 5420561fac3acc0d0668da22039c02c8 212 Gene3D G3DSA:2.40.360.10 16 210 1.0E-77 T 06-07-2017 IPR023373 YmcC-like domain LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 SMART SM00382 34 222 1.3E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 Gene3D G3DSA:3.40.50.300 5 226 9.4E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 SUPERFAMILY SSF52540 5 224 4.8E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 6.8E-112 T 06-07-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 LFZ55_RS14175 c99ad48d8b707ef3af86229adeafc531 233 Pfam PF00005 ABC transporter 25 173 2.8E-36 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 Pfam PF04310 MukB N-terminal 2 227 8.2E-125 T 06-07-2017 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 Pfam PF16330 MukB hinge domain 645 810 1.1E-73 T 06-07-2017 IPR032520 MukB, hinge domain LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.29 T 06-07-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 SUPERFAMILY SSF52540 22 224 3.89E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 PIRSF PIRSF005246 1 1486 0.0 T 06-07-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 SUPERFAMILY SSF52540 1268 1433 4.3E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 SUPERFAMILY SSF52540 21 55 4.3E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 Gene3D G3DSA:3.40.1140.10 1 226 3.1E-51 T 06-07-2017 LFZ55_RS15660 e4c7f05c49be7460e3d46ddffb9d5a80 1488 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 6.6E-15 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 Gene3D G3DSA:3.50.50.60 120 237 5.5E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 Gene3D G3DSA:3.50.50.60 4 119 1.1E-34 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 Gene3D G3DSA:3.50.50.60 238 316 5.0E-9 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 06-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 4.5E-124 T 06-07-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.7E-41 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.7E-41 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 3.7E-41 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 3.7E-41 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.7E-41 T 06-07-2017 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.2E-77 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 SUPERFAMILY SSF51905 2 315 7.18E-53 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15850 3344ddfc49e756c318b82fa7d2a1c18f 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.5E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Gene3D G3DSA:1.10.10.10 173 238 3.9E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 SUPERFAMILY SSF88659 157 237 5.79E-20 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Pfam PF04539 Sigma-70 region 3 97 167 1.6E-19 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 3.4E-13 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 3.4E-13 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 3.4E-13 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 3.4E-13 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 3.4E-13 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 63.812 T 06-07-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 SUPERFAMILY SSF88659 89 156 2.27E-17 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 PIRSF PIRSF000770 1 238 9.7E-42 T 06-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Pfam PF04545 Sigma-70, region 4 185 233 8.5E-17 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Pfam PF04542 Sigma-70 region 2 16 88 1.9E-16 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 9.1E-87 T 06-07-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Gene3D G3DSA:1.10.601.10 11 80 8.1E-15 T 06-07-2017 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 3.2E-33 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 Gene3D G3DSA:1.10.10.10 88 135 8.3E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09640 9b6a939016e0a4494437671730edca6d 239 SUPERFAMILY SSF88946 5 88 3.66E-23 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 9.9E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 9.9E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 9.9E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 9.9E-14 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF52172 668 786 8.54E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF00072 Response regulator receiver domain 670 780 5.2E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF55874 346 516 5.37E-44 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SMART SM00073 819 914 5.3E-22 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 3.9E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 06-07-2017 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF00672 HAMP domain 181 248 1.4E-11 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SMART SM00448 668 781 1.5E-33 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF01627 Hpt domain 828 908 4.6E-13 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 3.3E-20 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF47226 764 777 4.58E-23 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF47226 808 909 4.58E-23 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Gene3D G3DSA:1.20.120.160 820 917 5.3E-22 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SMART SM00387 404 520 9.9E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Gene3D G3DSA:3.40.50.2300 668 784 4.1E-37 T 06-07-2017 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Gene3D G3DSA:3.30.565.10 343 518 2.9E-44 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SMART SM00388 292 357 1.2E-25 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SUPERFAMILY SSF47384 277 358 1.35E-22 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 SMART SM00304 200 252 1.7E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 1.8E-55 T 06-07-2017 IPR019247 Histidine kinase BarA, N-terminal LFZ55_RS04650 60b3f38452c6744bb5cefb284e996f25 918 Gene3D G3DSA:1.10.287.130 284 342 5.9E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS24595 6803ad851b587bdef63cbb878cef73fb 139 Pfam PF07419 PilM 14 138 1.5E-20 T 06-07-2017 IPR009987 PilM, inner membrane LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 SMART SM00382 31 218 3.7E-17 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 Gene3D G3DSA:3.10.580.10 253 368 8.9E-21 T 06-07-2017 LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 Gene3D G3DSA:3.40.50.300 1 239 5.4E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 SUPERFAMILY SSF52540 1 245 2.57E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 SUPERFAMILY SSF54631 255 369 4.83E-17 T 06-07-2017 LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 SMART SM00116 263 311 7.7E-7 T 06-07-2017 IPR000644 CBS domain LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 Pfam PF00005 ABC transporter 22 168 1.7E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 1.9E-106 T 06-07-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 Pfam PF00571 CBS domain 326 368 0.0068 T 06-07-2017 IPR000644 CBS domain LFZ55_RS12740 21f9b76eb0966c01bfe12b2df09841dc 382 Pfam PF00571 CBS domain 257 306 3.1E-7 T 06-07-2017 IPR000644 CBS domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Gene3D G3DSA:1.10.287.130 328 388 7.4E-24 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SMART SM00387 430 538 3.8E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 384 1.7E-11 T 06-07-2017 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SMART SM00091 222 288 5.1E-4 T 06-07-2017 IPR000014 PAS domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SUPERFAMILY SSF103190 46 179 3.57E-39 T 06-07-2017 IPR029151 Periplasmic sensor domain-like LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SUPERFAMILY SSF55785 221 322 5.9E-8 T 06-07-2017 IPR000014 PAS domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Pfam PF00989 PAS fold 222 323 1.9E-13 T 06-07-2017 IPR013767 PAS fold GO:0006355 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Pfam PF17203 Single cache domain 3 48 178 9.5E-24 T 06-07-2017 IPR033463 Single cache domain 3 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 535 6.0E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 6.5E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 6.5E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 6.5E-10 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SUPERFAMILY SSF55890 339 450 1.7E-14 T 06-07-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Gene3D G3DSA:3.30.565.10 435 535 6.6E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Gene3D G3DSA:3.30.450.20 222 327 6.9E-13 T 06-07-2017 LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 SUPERFAMILY SSF55874 432 535 1.06E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22075 c74f6e493c0719f10abe0f5655769f0b 543 Gene3D G3DSA:3.30.450.20 41 178 6.5E-49 T 06-07-2017 LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 Gene3D G3DSA:3.40.1160.10 1 257 5.1E-78 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 8.1E-75 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 SUPERFAMILY SSF53633 1 256 3.01E-61 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 26.561 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 Pfam PF00696 Amino acid kinase family 5 235 2.9E-37 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase LFZ55_RS22960 90d3a1e15ee7d16ecaa1d535a4773c39 258 PIRSF PIRSF000728 1 258 8.3E-72 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:3.30.1590.10 96 224 7.4E-39 T 06-07-2017 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 SMART SM00642 4 735 6.3E-6 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 3 839 0.0 T 06-07-2017 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:3.20.20.80 3 95 6.1E-72 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:3.20.20.80 240 313 6.1E-72 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:3.20.20.80 495 534 6.1E-72 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:3.20.20.80 651 775 6.1E-72 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:1.10.10.470 535 644 1.1E-29 T 06-07-2017 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:1.10.150.200 338 397 4.0E-8 T 06-07-2017 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Gene3D G3DSA:1.10.150.200 429 461 4.0E-8 T 06-07-2017 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 Pfam PF00128 Alpha amylase, catalytic domain 25 256 3.2E-19 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 SUPERFAMILY SSF51445 445 742 3.53E-126 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS12230 b05930122355246ea42f954574e7409f 842 SUPERFAMILY SSF51445 2 413 3.53E-126 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Gene3D G3DSA:3.40.50.980 16 178 3.3E-25 T 06-07-2017 LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Gene3D G3DSA:2.30.38.10 341 416 3.6E-22 T 06-07-2017 LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Pfam PF00501 AMP-binding enzyme 21 422 6.8E-79 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 SUPERFAMILY SSF56801 10 518 4.45E-125 T 06-07-2017 LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 5.3E-14 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Gene3D G3DSA:3.30.300.30 417 519 4.0E-25 T 06-07-2017 LFZ55_RS10690 0fd5247f15583af4f9c9174bd3f55688 525 Gene3D G3DSA:3.40.50.980 179 331 1.7E-36 T 06-07-2017 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 06-07-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 4.8E-243 T 06-07-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 SUPERFAMILY SSF48256 8 426 2.09E-168 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 Gene3D G3DSA:1.10.580.10 52 280 1.0E-95 T 06-07-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 1.7E-132 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 Gene3D G3DSA:1.10.230.10 281 373 4.3E-43 T 06-07-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 LFZ55_RS16945 978c6eb94714bba67ed5795c3456d2c7 427 PIRSF PIRSF001369 38 427 5.9E-177 T 06-07-2017 IPR024176 Citrate synthase, bacterial-type LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 SUPERFAMILY SSF82861 79 160 1.22E-9 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 SUPERFAMILY SSF50182 162 228 6.54E-17 T 06-07-2017 IPR010920 LSM domain LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 SUPERFAMILY SSF82689 231 335 1.2E-22 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 Gene3D G3DSA:3.30.70.100 233 321 2.0E-17 T 06-07-2017 LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 Pfam PF00924 Mechanosensitive ion channel 121 323 8.5E-62 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS11565 84c45b3ad7acb7e5eb252a1a9af31abb 343 Gene3D G3DSA:2.30.30.60 178 228 2.1E-14 T 06-07-2017 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 SUPERFAMILY SSF51395 4 319 1.65E-69 T 06-07-2017 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 SUPERFAMILY SSF54862 310 400 7.23E-20 T 06-07-2017 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 Pfam PF14697 4Fe-4S dicluster domain 338 394 2.1E-16 T 06-07-2017 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 Gene3D G3DSA:3.20.20.70 4 319 7.0E-79 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 Pfam PF01180 Dihydroorotate dehydrogenase 6 304 5.6E-34 T 06-07-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 Gene3D G3DSA:3.30.70.20 324 405 7.6E-16 T 06-07-2017 LFZ55_RS08335 05ea56b43c5a4fb1f87904c7584c830b 411 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 1.1E-59 T 06-07-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.7E-212 T 06-07-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 SUPERFAMILY SSF51998 121 687 3.66E-201 T 06-07-2017 LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.2E-184 T 06-07-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 Pfam PF03477 ATP cone domain 4 89 1.0E-20 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 LFZ55_RS21335 11f76ab57defb9946c0a4c50a260cb14 712 Gene3D G3DSA:3.20.70.20 124 685 1.6E-189 T 06-07-2017 LFZ55_RS24850 a656d438008ad72fc93c65c9ea37d065 247 Pfam PF13728 F plasmid transfer operon protein 25 235 2.4E-65 T 06-07-2017 LFZ55_RS24850 a656d438008ad72fc93c65c9ea37d065 247 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 15 246 5.9E-93 T 06-07-2017 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF LFZ55_RS24850 a656d438008ad72fc93c65c9ea37d065 247 Gene3D G3DSA:3.40.30.10 167 240 5.3E-4 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 Gene3D G3DSA:3.90.76.10 46 225 7.1E-45 T 06-07-2017 LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 PIRSF PIRSF002741 1 545 1.1E-94 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 Gene3D G3DSA:3.10.105.10 295 510 2.2E-55 T 06-07-2017 LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 SUPERFAMILY SSF53850 38 539 9.59E-133 T 06-07-2017 LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site LFZ55_RS11385 c8cafc1cd51d8a2fbb08621c63c5be02 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 460 2.0E-80 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS24160 e4dc75c285d5f20f15d1042b2df40540 395 Gene3D G3DSA:1.20.1250.20 214 383 4.4E-8 T 06-07-2017 LFZ55_RS24160 e4dc75c285d5f20f15d1042b2df40540 395 Gene3D G3DSA:1.20.1250.20 3 187 1.9E-32 T 06-07-2017 LFZ55_RS24160 e4dc75c285d5f20f15d1042b2df40540 395 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 393 40.514 T 06-07-2017 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 LFZ55_RS24160 e4dc75c285d5f20f15d1042b2df40540 395 Pfam PF07690 Major Facilitator Superfamily 10 344 8.9E-42 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS24160 e4dc75c285d5f20f15d1042b2df40540 395 SUPERFAMILY SSF103473 3 381 4.19E-52 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF00589 Phage integrase family 205 373 5.5E-19 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 112 148 8.0E-5 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 Gene3D G3DSA:1.10.443.10 202 381 7.9E-26 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 Gene3D G3DSA:1.10.150.130 98 191 8.0E-16 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF13356 Domain of unknown function (DUF4102) 2 87 8.5E-16 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS06325 99683ab4fa6579d8af6f8e2c490a99fe 417 SUPERFAMILY SSF56349 98 383 7.36E-57 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF00589 Phage integrase family 205 373 5.5E-19 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 112 148 8.0E-5 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 Gene3D G3DSA:1.10.443.10 202 381 7.9E-26 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 Gene3D G3DSA:1.10.150.130 98 191 8.0E-16 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 Pfam PF13356 Domain of unknown function (DUF4102) 2 87 8.5E-16 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 LFZ55_RS06570 99683ab4fa6579d8af6f8e2c490a99fe 417 SUPERFAMILY SSF56349 98 383 7.36E-57 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS14625 edbcdec470bfae4e6458415af872d93c 332 SUPERFAMILY SSF56349 9 303 1.21E-48 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS14625 edbcdec470bfae4e6458415af872d93c 332 Gene3D G3DSA:1.10.443.10 118 295 4.4E-18 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS14625 edbcdec470bfae4e6458415af872d93c 332 Gene3D G3DSA:1.10.150.130 9 102 4.3E-13 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS14625 edbcdec470bfae4e6458415af872d93c 332 Pfam PF00589 Phage integrase family 120 295 3.4E-17 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 SUPERFAMILY SSF56801 4 451 3.79E-97 T 06-07-2017 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 426 5.8E-9 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 445 3.1E-117 T 06-07-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Gene3D G3DSA:3.40.50.980 13 147 1.4E-22 T 06-07-2017 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Gene3D G3DSA:3.30.300.30 353 449 2.5E-19 T 06-07-2017 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Gene3D G3DSA:3.40.50.980 148 290 1.1E-22 T 06-07-2017 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 448 35.092 T 06-07-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Pfam PF00501 AMP-binding enzyme 13 355 3.3E-51 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS07740 3f8bde5fff4ad179f8cad095e1835098 455 Gene3D G3DSA:2.30.38.10 291 350 6.0E-7 T 06-07-2017 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 SUPERFAMILY SSF56935 19 672 6.96E-95 T 06-07-2017 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 2.5E-14 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 Gene3D G3DSA:2.40.170.20 153 672 9.1E-74 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 Gene3D G3DSA:2.170.130.10 22 152 9.5E-26 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 Pfam PF00593 TonB dependent receptor 434 669 3.7E-30 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS10685 6856d731e37b8b01870fb306463318ae 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 2.4E-146 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS03945 82d00159c91d001309bb2b2871b36385 229 Pfam PF00005 ABC transporter 19 164 3.0E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS03945 82d00159c91d001309bb2b2871b36385 229 SUPERFAMILY SSF52540 2 215 3.75E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03945 82d00159c91d001309bb2b2871b36385 229 Gene3D G3DSA:3.40.50.300 1 215 1.8E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03945 82d00159c91d001309bb2b2871b36385 229 SMART SM00382 28 213 1.5E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01885 33a21c1019acc34a4bcc5903dd065a27 551 SUPERFAMILY SSF100950 36 280 5.79E-38 T 06-07-2017 LFZ55_RS01885 33a21c1019acc34a4bcc5903dd065a27 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 06-07-2017 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 LFZ55_RS01885 33a21c1019acc34a4bcc5903dd065a27 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 551 2.8E-297 T 06-07-2017 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 LFZ55_RS01885 33a21c1019acc34a4bcc5903dd065a27 551 Gene3D G3DSA:3.40.1080.10 37 228 1.0E-13 T 06-07-2017 LFZ55_RS01885 33a21c1019acc34a4bcc5903dd065a27 551 SUPERFAMILY SSF100950 232 496 2.15E-23 T 06-07-2017 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Gene3D G3DSA:3.40.50.10750 524 682 3.4E-67 T 06-07-2017 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Pfam PF13500 AAA domain 5 229 4.5E-49 T 06-07-2017 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Gene3D G3DSA:3.40.1390.20 225 365 3.1E-30 T 06-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 SUPERFAMILY SSF75138 229 353 2.55E-25 T 06-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.5E-137 T 06-07-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 PIRSF PIRSF006107 1 714 0.0 T 06-07-2017 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 7.2E-128 T 06-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Gene3D G3DSA:3.40.50.300 3 223 1.3E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 Pfam PF07085 DRTGG domain 233 344 2.4E-29 T 06-07-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 SUPERFAMILY SSF52540 4 240 2.76E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07575 132d58eda8cf4f722b730100ac0209fd 714 SUPERFAMILY SSF53659 392 709 2.01E-94 T 06-07-2017 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 SUPERFAMILY SSF52518 380 576 2.32E-68 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 13 578 1.5E-277 T 06-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 440 459 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Gene3D G3DSA:3.40.50.970 12 180 2.5E-73 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Gene3D G3DSA:3.40.50.970 367 567 3.6E-75 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Gene3D G3DSA:3.40.50.1220 199 366 1.4E-66 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 SUPERFAMILY SSF52467 198 371 7.54E-62 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 554 1.8E-48 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 176 1.4E-57 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 205 339 1.5E-44 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LFZ55_RS19805 c41c31a770d5c7ee31cc5b1e689cf199 583 SUPERFAMILY SSF52518 11 189 3.58E-64 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS00210 7c983af9df807aa5cc8d52344e6b7d39 445 PIRSF PIRSF002746 2 445 7.9E-144 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS00210 7c983af9df807aa5cc8d52344e6b7d39 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 4.8E-170 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS00210 7c983af9df807aa5cc8d52344e6b7d39 445 Pfam PF02447 GntP family permease 7 444 2.0E-161 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PRINTS PR01009 Flagellar M-ring protein signature 122 140 7.8E-46 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PRINTS PR01009 Flagellar M-ring protein signature 266 284 7.8E-46 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PRINTS PR01009 Flagellar M-ring protein signature 154 168 7.8E-46 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PRINTS PR01009 Flagellar M-ring protein signature 197 215 7.8E-46 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PRINTS PR01009 Flagellar M-ring protein signature 365 389 7.8E-46 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 Pfam PF01514 Secretory protein of YscJ/FliF family 33 221 1.1E-76 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 559 1.1E-213 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 PIRSF PIRSF004862 4 560 1.5E-178 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LFZ55_RS09580 adf20b0304e36621cbc1b7d5be40c88f 560 Pfam PF08345 Flagellar M-ring protein C-terminal 253 437 7.9E-51 T 06-07-2017 IPR013556 Flagellar M-ring C-terminal LFZ55_RS07170 5a836a20fe4116c28155c0af72d7b890 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 1.5E-146 T 06-07-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 LFZ55_RS07170 5a836a20fe4116c28155c0af72d7b890 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.6E-21 T 06-07-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 LFZ55_RS07170 5a836a20fe4116c28155c0af72d7b890 400 Pfam PF07670 Nucleoside recognition 92 190 1.9E-7 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 LFZ55_RS07170 5a836a20fe4116c28155c0af72d7b890 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 5.5E-59 T 06-07-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02320 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS22490 1c38cfaa2570d6404250ef3641275b72 69 Gene3D G3DSA:1.10.1470.10 1 67 7.2E-32 T 06-07-2017 IPR008462 CsbD-like LFZ55_RS22490 1c38cfaa2570d6404250ef3641275b72 69 SUPERFAMILY SSF69047 1 69 1.44E-26 T 06-07-2017 IPR008462 CsbD-like LFZ55_RS22490 1c38cfaa2570d6404250ef3641275b72 69 PIRSF PIRSF039008 1 66 2.2E-31 T 06-07-2017 IPR026042 Stress response protein YjbJ LFZ55_RS22490 1c38cfaa2570d6404250ef3641275b72 69 Pfam PF05532 CsbD-like 4 56 1.4E-21 T 06-07-2017 IPR008462 CsbD-like LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 SMART SM00895 84 210 3.0E-8 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 SUPERFAMILY SSF46785 6 83 2.72E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 Gene3D G3DSA:1.20.120.530 77 217 1.7E-16 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 SUPERFAMILY SSF48008 80 215 4.97E-18 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 SMART SM00345 16 74 3.4E-13 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.0E-11 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 Pfam PF07729 FCD domain 85 209 4.3E-17 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS12070 5c33906317c921f79f1129d79b3a711c 221 Gene3D G3DSA:1.10.10.10 3 74 3.1E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12295 9651adda3d2f9c794e9f50910a52967f 447 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 112 6.2E-20 T 06-07-2017 IPR010657 ImpA, N-terminal LFZ55_RS12295 9651adda3d2f9c794e9f50910a52967f 447 Pfam PF12486 Type VI secretion system, EvfB, or VasL 299 441 7.7E-41 T 06-07-2017 IPR021069 ImpA, C-terminal LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 Gene3D G3DSA:2.60.40.420 122 281 6.6E-43 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 1.7E-123 T 06-07-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 Gene3D G3DSA:1.10.287.90 29 113 4.5E-37 T 06-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 4.4E-5 T 06-07-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 Pfam PF06481 COX Aromatic Rich Motif 239 285 6.5E-19 T 06-07-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 SUPERFAMILY SSF49503 122 282 6.62E-54 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 SUPERFAMILY SSF81464 29 116 8.34E-24 T 06-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LFZ55_RS18255 9789e750ea862e2eb69db7eb130ad539 318 PIRSF PIRSF000292 1 313 7.7E-134 T 06-07-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 SUPERFAMILY SSF55781 2 158 1.77E-29 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.4E-24 T 06-07-2017 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.4E-24 T 06-07-2017 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.4E-24 T 06-07-2017 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.4E-24 T 06-07-2017 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Gene3D G3DSA:3.20.20.60 420 736 2.7E-101 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 2.4E-126 T 06-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Gene3D G3DSA:1.10.274.10 197 300 3.3E-32 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Gene3D G3DSA:3.50.30.10 301 414 1.8E-29 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Pfam PF01590 GAF domain 18 152 1.0E-14 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 SUPERFAMILY SSF51621 419 715 6.77E-97 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Gene3D G3DSA:3.30.450.40 1 158 8.1E-46 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.0E-15 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 06-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 SUPERFAMILY SSF52009 293 413 8.76E-25 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 SUPERFAMILY SSF47831 198 309 4.45E-25 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 SMART SM00065 17 164 8.4E-28 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 3.4E-109 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LFZ55_RS04415 a90a09b69e93895f1e08ad0fff54f509 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 2.9E-22 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 Gene3D G3DSA:2.60.40.1070 148 226 4.5E-27 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 145 5.1E-39 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 PRINTS PR00969 Pili chaperone signature 162 177 2.1E-35 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 PRINTS PR00969 Pili chaperone signature 27 36 2.1E-35 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 PRINTS PR00969 Pili chaperone signature 100 117 2.1E-35 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 PRINTS PR00969 Pili chaperone signature 127 142 2.1E-35 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 PRINTS PR00969 Pili chaperone signature 72 93 2.1E-35 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 222 1.6E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 Gene3D G3DSA:2.60.40.360 26 145 6.1E-44 T 06-07-2017 IPR008962 PapD-like LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 SUPERFAMILY SSF49584 147 225 5.63E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS17820 a54d3f04c0887980d8e6bec75df36872 230 SUPERFAMILY SSF49354 22 145 1.99E-38 T 06-07-2017 IPR008962 PapD-like LFZ55_RS19160 dfb3f03b6fe7a64209f136631619d399 217 Gene3D G3DSA:1.10.3720.10 9 214 1.2E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19160 dfb3f03b6fe7a64209f136631619d399 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 8.0E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS19160 dfb3f03b6fe7a64209f136631619d399 217 SUPERFAMILY SSF161098 9 201 9.81E-48 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS03295 df65f0eb7a6d6219942e6eef117c04c0 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.045 T 06-07-2017 IPR023498 Zinc transporter ZupT LFZ55_RS03295 df65f0eb7a6d6219942e6eef117c04c0 257 Pfam PF02535 ZIP Zinc transporter 103 246 4.3E-24 T 06-07-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 LFZ55_RS03295 df65f0eb7a6d6219942e6eef117c04c0 257 Pfam PF02535 ZIP Zinc transporter 7 100 5.3E-8 T 06-07-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 LFZ55_RS08245 9010899129a2a1f060488ac043607ea5 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 6.3E-161 T 06-07-2017 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 LFZ55_RS08245 9010899129a2a1f060488ac043607ea5 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 5.0E-114 T 06-07-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 Pfam PF01514 Secretory protein of YscJ/FliF family 19 194 7.9E-24 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 193 6.7E-66 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 3.6E-17 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 3.6E-17 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 3.6E-17 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 3.6E-17 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS18890 194d32444d206166af2c03aee675125a 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 3.6E-17 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 930 989 0.001 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 431 505 3.2E-5 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 2104 2180 2.3E-8 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 1020 1088 2.9E-4 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 1817 1882 5.6E-4 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 3084 3153 1.8E-7 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 334 409 1.7E-4 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Gene3D G3DSA:2.60.40.1560 2597 2672 0.001 T 06-07-2017 LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 1174 1190 0.13 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 578 597 1.6 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 1764 1784 4.4 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 1275 1291 0.26 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 2154 2179 0.022 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 867 892 0.083 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 380 406 0.0014 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS22055 fef91a4bfd3764f15f57633e31aa323c 3194 Pfam PF12245 Bacterial Ig-like domain (group 3) 2647 2667 2.1 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS07145 d76a976fbcfa4e0e5445d9d5d01ffd5e 120 Pfam PF07037 Putative transcription regulator (DUF1323) 6 119 1.9E-51 T 06-07-2017 IPR010749 Protein of unknown function DUF1323 LFZ55_RS07145 d76a976fbcfa4e0e5445d9d5d01ffd5e 120 Gene3D G3DSA:1.10.10.10 3 66 2.8E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07145 d76a976fbcfa4e0e5445d9d5d01ffd5e 120 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 120 1.0E-62 T 06-07-2017 IPR010749 Protein of unknown function DUF1323 LFZ55_RS07145 d76a976fbcfa4e0e5445d9d5d01ffd5e 120 SUPERFAMILY SSF46955 3 55 1.83E-13 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 Gene3D G3DSA:2.160.20.20 59 481 5.1E-42 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 Pfam PF03797 Autotransporter beta-domain 544 806 7.2E-42 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 Gene3D G3DSA:2.40.128.130 483 822 4.5E-79 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 SUPERFAMILY SSF103515 508 822 7.72E-47 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 362 822 1.6E-107 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 SUPERFAMILY SSF51126 55 465 1.57E-30 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS11775 f34df193bb51c6ea311f900d6f513c4d 822 SMART SM00869 543 811 1.9E-38 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 Gene3D G3DSA:1.10.10.60 232 278 3.1E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 6.7E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 6.7E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 SMART SM00342 197 279 8.7E-32 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 Pfam PF12833 Helix-turn-helix domain 205 279 2.2E-17 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22015 7f6d38c9396cf1210a872fc39e4824cf 291 SUPERFAMILY SSF46689 233 279 3.94E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10585 825b4c4e55227542bf3fade89134c220 282 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 49 139 8.5E-10 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS10585 825b4c4e55227542bf3fade89134c220 282 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 164 279 3.2E-35 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS10585 825b4c4e55227542bf3fade89134c220 282 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 164 282 7.0E-62 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS10585 825b4c4e55227542bf3fade89134c220 282 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 49 144 2.0E-48 T 06-07-2017 IPR006894 HupH hydrogenase expression protein, C-terminal LFZ55_RS15345 375f6893769a8c52f8a3e507611fc8a3 225 Pfam PF01527 Transposase 95 164 1.7E-18 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS15345 375f6893769a8c52f8a3e507611fc8a3 225 Gene3D G3DSA:1.10.10.60 100 142 2.2E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS15345 375f6893769a8c52f8a3e507611fc8a3 225 SUPERFAMILY SSF46689 96 142 1.27E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02490 2448c937a210fce492d9d4f5e1079a98 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 06-07-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02490 2448c937a210fce492d9d4f5e1079a98 130 Gene3D G3DSA:3.30.230.10 4 130 7.6E-51 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS02490 2448c937a210fce492d9d4f5e1079a98 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.021 T 06-07-2017 IPR023035 Ribosomal protein S9, bacterial/plastid LFZ55_RS02490 2448c937a210fce492d9d4f5e1079a98 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.6E-47 T 06-07-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02490 2448c937a210fce492d9d4f5e1079a98 130 SUPERFAMILY SSF54211 5 130 2.96E-49 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS18550 84f7ca2daa5b5a0b2ad456482186be65 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 364 3.1E-147 T 06-07-2017 IPR011673 Protein of unknown function DUF1615 LFZ55_RS18550 84f7ca2daa5b5a0b2ad456482186be65 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 13 364 0.0 T 06-07-2017 IPR011673 Protein of unknown function DUF1615 LFZ55_RS16850 ad20c6413f36b6bfc42e8fddeba11306 402 Gene3D G3DSA:3.30.1150.10 305 401 5.7E-40 T 06-07-2017 LFZ55_RS16850 ad20c6413f36b6bfc42e8fddeba11306 402 TIGRFAM TIGR02794 tolA_full: protein TolA 12 242 1.2E-51 T 06-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LFZ55_RS16850 ad20c6413f36b6bfc42e8fddeba11306 402 TIGRFAM TIGR02794 tolA_full: protein TolA 220 401 1.1E-39 T 06-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LFZ55_RS16850 ad20c6413f36b6bfc42e8fddeba11306 402 SUPERFAMILY SSF74653 316 402 1.75E-18 T 06-07-2017 LFZ55_RS16850 ad20c6413f36b6bfc42e8fddeba11306 402 Pfam PF06519 TolA C-terminal 308 400 2.1E-36 T 06-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 SUPERFAMILY SSF52096 15 280 2.56E-79 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.492 T 06-07-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 Gene3D G3DSA:3.90.226.10 22 222 7.3E-71 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.8E-151 T 06-07-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 Gene3D G3DSA:1.10.12.10 223 273 2.3E-30 T 06-07-2017 IPR014748 Crontonase, C-terminal LFZ55_RS07730 6ab2b3a8f532d190c0b1b623710d5a65 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 7.9E-79 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 Gene3D G3DSA:3.40.50.1000 2 72 3.7E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 Gene3D G3DSA:3.40.50.1000 175 263 3.7E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 66.08 T 06-07-2017 IPR023938 HMP-PP phosphatase GO:0016818 LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 Gene3D G3DSA:3.30.1240.10 83 174 6.8E-15 T 06-07-2017 LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 SUPERFAMILY SSF56784 1 262 1.29E-59 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 3.8E-51 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.3E-56 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS18175 3a96914b59fb6f0af3aeeec388554846 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.7E-50 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 Pfam PF02119 Flagellar P-ring protein 21 364 1.3E-138 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 365 39.804 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS14360 5074c30ee6ec8ddb59b4f2043aa710b0 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 5.3E-94 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LFZ55_RS16030 60d78c044793e5088fd0a2bd211e0023 447 Pfam PF03611 PTS system sugar-specific permease component 18 411 4.1E-98 T 06-07-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LFZ55_RS07270 2737d80a0d1b49255ef98f5c38c4856f 397 Pfam PF13343 Bacterial extracellular solute-binding protein 60 287 1.1E-28 T 06-07-2017 LFZ55_RS07270 2737d80a0d1b49255ef98f5c38c4856f 397 SUPERFAMILY SSF53850 8 311 4.98E-39 T 06-07-2017 LFZ55_RS07270 2737d80a0d1b49255ef98f5c38c4856f 397 Gene3D G3DSA:3.40.190.10 112 245 4.6E-20 T 06-07-2017 LFZ55_RS07270 2737d80a0d1b49255ef98f5c38c4856f 397 Gene3D G3DSA:3.40.190.10 246 282 1.5E-12 T 06-07-2017 LFZ55_RS07270 2737d80a0d1b49255ef98f5c38c4856f 397 Gene3D G3DSA:3.40.190.10 10 109 1.5E-12 T 06-07-2017 LFZ55_RS01095 d8a564daa8f33ea6d51d39a0ad516272 250 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 238 2.2E-78 T 06-07-2017 IPR017746 Cellulose synthase operon protein BcsQ LFZ55_RS01095 d8a564daa8f33ea6d51d39a0ad516272 250 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 1.8E-106 T 06-07-2017 IPR017746 Cellulose synthase operon protein BcsQ LFZ55_RS01095 d8a564daa8f33ea6d51d39a0ad516272 250 Gene3D G3DSA:3.40.50.300 10 236 7.3E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01095 d8a564daa8f33ea6d51d39a0ad516272 250 SUPERFAMILY SSF52540 3 235 2.07E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 Gene3D G3DSA:3.90.1310.10 135 234 6.7E-32 T 06-07-2017 LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 214 2.4E-18 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 SUPERFAMILY SSF56519 56 227 1.44E-45 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.0E-78 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 Gene3D G3DSA:3.40.710.10 235 554 7.2E-86 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS10350 12e852a53049ec4af180fc1e3eb0a7e6 581 SUPERFAMILY SSF56601 228 556 5.29E-89 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS22655 b23ddfa9fc2ef4d90844a88fe4c65274 583 PIRSF PIRSF000719 1 575 3.0E-294 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LFZ55_RS22655 b23ddfa9fc2ef4d90844a88fe4c65274 583 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 4.8E-245 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LFZ55_RS22655 b23ddfa9fc2ef4d90844a88fe4c65274 583 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.446 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LFZ55_RS22655 b23ddfa9fc2ef4d90844a88fe4c65274 583 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LFZ55_RS10460 bf57a1aac27178719802a9d907e0cf3e 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.902 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LFZ55_RS10460 bf57a1aac27178719802a9d907e0cf3e 88 Gene3D G3DSA:3.30.1070.10 31 86 4.1E-26 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LFZ55_RS10460 bf57a1aac27178719802a9d907e0cf3e 88 SUPERFAMILY SSF55229 32 85 1.31E-18 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LFZ55_RS10460 bf57a1aac27178719802a9d907e0cf3e 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.3E-36 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LFZ55_RS10460 bf57a1aac27178719802a9d907e0cf3e 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.0E-25 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 73 92 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 54 72 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 210 228 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 255 273 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 29 50 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 233 250 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00691 Adhesin B signature 184 201 3.0E-36 T 06-07-2017 IPR006129 Adhesin B GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 Gene3D G3DSA:3.40.50.1980 177 297 4.8E-40 T 06-07-2017 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 SUPERFAMILY SSF53807 26 298 2.21E-90 T 06-07-2017 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 60 73 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 237 255 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 29 47 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 263 282 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 184 205 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 PRINTS PR00690 Adhesin family signature 73 90 8.0E-42 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 3.9E-73 T 06-07-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LFZ55_RS05105 7d57ddbaf709782a2abeec6425d382fb 305 Gene3D G3DSA:3.40.50.1980 20 176 1.1E-50 T 06-07-2017 LFZ55_RS07250 d696f8b146a030f85b034cd3f4ac1c52 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.682 T 06-07-2017 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 LFZ55_RS07250 d696f8b146a030f85b034cd3f4ac1c52 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 305 9.5E-139 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 LFZ55_RS07250 d696f8b146a030f85b034cd3f4ac1c52 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 296 3.3E-112 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS07250 d696f8b146a030f85b034cd3f4ac1c52 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.855 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 LFZ55_RS07250 d696f8b146a030f85b034cd3f4ac1c52 306 PIRSF PIRSF026649 2 305 3.2E-93 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 197 1.4E-26 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 5 445 43.173 T 06-07-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 SUPERFAMILY SSF52540 7 200 4.58E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 Gene3D G3DSA:3.40.50.300 6 197 5.7E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 Gene3D G3DSA:3.40.50.880 260 457 1.8E-25 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 444 2.3E-40 T 06-07-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 SUPERFAMILY SSF52317 254 453 1.4E-31 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS09070 f241a2a3609e818d20392610f73eae1d 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 9 453 3.2E-133 T 06-07-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 LFZ55_RS10655 1a730f8e77f4f385d1dc51438c255e18 146 Pfam PF03610 PTS system fructose IIA component 3 115 1.2E-26 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS10655 1a730f8e77f4f385d1dc51438c255e18 146 Gene3D G3DSA:3.40.50.510 1 131 3.9E-38 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS10655 1a730f8e77f4f385d1dc51438c255e18 146 SUPERFAMILY SSF53062 1 129 3.4E-35 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-51 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.7E-35 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PIRSF PIRSF004555 3 109 1.5E-39 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-42 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS18025 a7c2dce10c2ff34d22b8aa674aa75c8c 109 SUPERFAMILY SSF82607 11 103 1.44E-36 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 123 5.3E-65 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 06-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 1.8E-43 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 06-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01985 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 7.8E-54 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS22360 8bd415e787447df585ec864a978fa925 93 PIRSF PIRSF030798 1 93 2.5E-55 T 06-07-2017 IPR016958 Uncharacterised conserved protein UCP030798 LFZ55_RS22360 8bd415e787447df585ec864a978fa925 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 1.0E-35 T 06-07-2017 IPR016958 Uncharacterised conserved protein UCP030798 LFZ55_RS22360 8bd415e787447df585ec864a978fa925 93 Pfam PF15940 Family of unknown function 1 90 3.6E-42 T 06-07-2017 IPR016958 Uncharacterised conserved protein UCP030798 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 Pfam PF00171 Aldehyde dehydrogenase family 12 470 4.8E-161 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 77.924 T 06-07-2017 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 06-07-2017 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 Gene3D G3DSA:3.40.605.10 2 258 1.3E-91 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 SUPERFAMILY SSF53720 2 473 1.07E-153 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12015 99efca5524389d06782bc6c3e42947c2 474 Gene3D G3DSA:3.40.309.10 259 437 1.5E-61 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS14405 e7332f1c475e54658de432485fb30684 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 3.2E-37 T 06-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LFZ55_RS14405 e7332f1c475e54658de432485fb30684 219 SMART SM00858 95 157 2.1E-7 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 LFZ55_RS14405 e7332f1c475e54658de432485fb30684 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 30 215 3.7E-38 T 06-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.1E-91 T 06-07-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 7.3E-10 T 06-07-2017 LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 Gene3D G3DSA:1.10.1060.10 108 236 9.5E-46 T 06-07-2017 LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 5.9E-31 T 06-07-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 Gene3D G3DSA:3.10.20.30 1 106 2.3E-36 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 SUPERFAMILY SSF46548 107 236 1.74E-39 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS16915 393f9795c3c71a39d6aa6e56a4e67aa9 238 SUPERFAMILY SSF54292 1 106 8.14E-30 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS02505 150321b749e6323dcaeeb68ecbedc842 166 Gene3D G3DSA:2.30.30.220 4 111 1.7E-52 T 06-07-2017 IPR007481 Stringent starvation protein B LFZ55_RS02505 150321b749e6323dcaeeb68ecbedc842 166 SUPERFAMILY SSF101738 4 112 1.96E-48 T 06-07-2017 IPR007481 Stringent starvation protein B LFZ55_RS02505 150321b749e6323dcaeeb68ecbedc842 166 PIRSF PIRSF005276 3 166 2.1E-60 T 06-07-2017 IPR007481 Stringent starvation protein B LFZ55_RS02505 150321b749e6323dcaeeb68ecbedc842 166 Pfam PF04386 Stringent starvation protein B 9 166 8.5E-45 T 06-07-2017 IPR007481 Stringent starvation protein B LFZ55_RS01515 e368a84c1df26cdbb1c1c495e7ce8940 162 SUPERFAMILY SSF55729 3 161 8.72E-39 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS01515 e368a84c1df26cdbb1c1c495e7ce8940 162 Gene3D G3DSA:3.40.630.30 2 161 2.7E-42 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS01515 e368a84c1df26cdbb1c1c495e7ce8940 162 Pfam PF00583 Acetyltransferase (GNAT) family 57 137 6.7E-16 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS19215 e54724add2581088971a9f302fafcdb7 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.8E-20 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LFZ55_RS19215 e54724add2581088971a9f302fafcdb7 129 Gene3D G3DSA:3.10.180.10 3 128 2.8E-35 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS19215 e54724add2581088971a9f302fafcdb7 129 SUPERFAMILY SSF54593 3 128 2.28E-30 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 450 3.4E-173 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 Gene3D G3DSA:1.20.1250.20 231 430 1.2E-4 T 06-07-2017 LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 Gene3D G3DSA:1.20.1250.20 12 199 6.7E-12 T 06-07-2017 LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 06-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 Pfam PF13347 MFS/sugar transport protein 10 436 5.2E-87 T 06-07-2017 LFZ55_RS22100 6a63cbaac4a2a6d0f23070ed45f0e06f 476 SUPERFAMILY SSF103473 10 442 1.83E-30 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 Pfam PF14760 Rnk N-terminus 4 42 1.4E-11 T 06-07-2017 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 9.3E-21 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 Gene3D G3DSA:3.10.50.30 46 136 9.1E-31 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 Gene3D G3DSA:1.10.286.20 1 44 2.2E-22 T 06-07-2017 LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 SUPERFAMILY SSF54534 49 127 1.57E-18 T 06-07-2017 LFZ55_RS17495 39606e42e82ca08c8f5d507910b6b6a6 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.66 T 06-07-2017 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 Gene3D G3DSA:3.40.50.740 109 191 2.1E-17 T 06-07-2017 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 SUPERFAMILY SSF53706 36 195 9.55E-56 T 06-07-2017 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 Pfam PF00384 Molybdopterin oxidoreductase 107 140 5.4E-6 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 8.2E-20 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 Gene3D G3DSA:2.20.25.90 37 108 8.6E-25 T 06-07-2017 LFZ55_RS12150 d176aea88810a49cebd0be73cc80bfda 195 SMART SM00926 43 104 1.4E-21 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS24885 89c46d955f8f2c62e5058dc099ba1d35 328 Pfam PF06834 TraU protein 27 327 1.9E-114 T 06-07-2017 IPR009649 TraU LFZ55_RS18700 429103194f707439797030d5d438a465 254 SUPERFAMILY SSF46894 20 107 7.37E-6 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 Gene3D G3DSA:3.10.20.30 2 106 1.5E-33 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.3E-97 T 06-07-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 7.4E-32 T 06-07-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 SUPERFAMILY SSF54292 4 106 2.16E-28 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 SUPERFAMILY SSF46548 107 229 3.14E-31 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 3.0E-11 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS21815 b9c5120ec43016d767ed56174db53f5d 244 Gene3D G3DSA:1.10.1060.10 107 231 1.5E-36 T 06-07-2017 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 Gene3D G3DSA:1.20.1090.10 203 394 2.6E-65 T 06-07-2017 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 SUPERFAMILY SSF56796 22 393 2.09E-113 T 06-07-2017 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 2.0E-111 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS06945 6d3779f15379ffe2ca472ea33e561cd1 395 Gene3D G3DSA:3.40.50.1970 22 202 9.7E-51 T 06-07-2017 LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.9E-16 T 06-07-2017 IPR013987 PhnA protein, N-terminal LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 Gene3D G3DSA:2.30.30.40 42 110 9.4E-39 T 06-07-2017 LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 SUPERFAMILY SSF82057 39 110 1.37E-29 T 06-07-2017 LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 3.9E-62 T 06-07-2017 IPR004624 PhnA protein LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 SUPERFAMILY SSF57783 1 36 2.38E-14 T 06-07-2017 LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 Gene3D G3DSA:2.20.25.10 1 40 1.4E-21 T 06-07-2017 LFZ55_RS22155 a27f249055c879667d3909d1359d7a31 111 Pfam PF03831 PhnA domain 44 111 1.2E-34 T 06-07-2017 IPR013988 PhnA protein, C-terminal LFZ55_RS08220 9d7eb235529c71f3a225d076c340ff8a 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 2.9E-192 T 06-07-2017 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 LFZ55_RS08220 9d7eb235529c71f3a225d076c340ff8a 393 SUPERFAMILY SSF103473 19 390 3.27E-49 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08220 9d7eb235529c71f3a225d076c340ff8a 393 Pfam PF07690 Major Facilitator Superfamily 21 356 3.4E-36 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS08220 9d7eb235529c71f3a225d076c340ff8a 393 Gene3D G3DSA:1.20.1250.20 213 391 1.1E-23 T 06-07-2017 LFZ55_RS08220 9d7eb235529c71f3a225d076c340ff8a 393 Gene3D G3DSA:1.20.1250.20 19 200 6.7E-21 T 06-07-2017 LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 3.6E-172 T 06-07-2017 IPR008135 Competence-induced protein CinA LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 SUPERFAMILY SSF142433 249 378 7.06E-7 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 118.323 T 06-07-2017 IPR008135 Competence-induced protein CinA LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 167 1.9E-37 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 PIRSF PIRSF006728 1 384 8.8E-112 T 06-07-2017 IPR008135 Competence-induced protein CinA LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 Gene3D G3DSA:3.40.980.10 2 201 2.1E-28 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.2E-31 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 SUPERFAMILY SSF53218 2 203 3.8E-36 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS07800 03187f23de522f54e8b2c343b4ab0f01 398 SMART SM00852 5 172 4.8E-35 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Gene3D G3DSA:3.50.50.60 316 408 4.0E-10 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Gene3D G3DSA:3.40.50.720 127 263 9.1E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 SUPERFAMILY SSF51971 124 347 8.24E-48 T 06-07-2017 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Gene3D G3DSA:1.10.1060.10 7 126 5.4E-35 T 06-07-2017 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 7 112 2.4E-33 T 06-07-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 395 3.1E-23 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 Gene3D G3DSA:3.50.50.60 264 315 8.7E-9 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 SUPERFAMILY SSF46548 8 135 2.51E-26 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 PRINTS PR00419 Adrenodoxin reductase family signature 257 271 7.2E-18 T 06-07-2017 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 7.2E-18 T 06-07-2017 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 7.2E-18 T 06-07-2017 LFZ55_RS08340 d487694aea40f2b6859cf252b8ee1655 413 PRINTS PR00419 Adrenodoxin reductase family signature 191 201 7.2E-18 T 06-07-2017 LFZ55_RS21985 6cd564f1d62b9465a1c6184e1d710086 179 Gene3D G3DSA:2.60.40.1090 27 179 2.5E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS21985 6cd564f1d62b9465a1c6184e1d710086 179 SUPERFAMILY SSF49401 27 179 1.34E-8 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS21985 6cd564f1d62b9465a1c6184e1d710086 179 PIRSF PIRSF002967 1 179 6.4E-99 T 06-07-2017 IPR016372 K88 fimbrial protein A LFZ55_RS14215 68d8d7196cd6091b5f2aaa970c991b62 180 SUPERFAMILY SSF53474 2 176 2.99E-9 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14215 68d8d7196cd6091b5f2aaa970c991b62 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.1E-71 T 06-07-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LFZ55_RS14215 68d8d7196cd6091b5f2aaa970c991b62 180 Gene3D G3DSA:3.40.50.1820 2 77 3.3E-5 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14215 68d8d7196cd6091b5f2aaa970c991b62 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 55.171 T 06-07-2017 IPR022987 Uncharacterised protein family UPF0227 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Gene3D G3DSA:3.30.870.10 502 684 1.3E-67 T 06-07-2017 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 1.6E-41 T 06-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 683 35.823 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 SUPERFAMILY SSF56024 320 499 1.1E-56 T 06-07-2017 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 4.6E-256 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Gene3D G3DSA:3.30.870.10 326 501 1.3E-74 T 06-07-2017 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.5E-31 T 06-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 SUPERFAMILY SSF56024 503 684 1.95E-68 T 06-07-2017 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Gene3D G3DSA:3.30.1840.10 106 300 1.9E-51 T 06-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 PIRSF PIRSF015589 1 687 3.3E-241 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 SUPERFAMILY SSF140356 3 105 7.85E-34 T 06-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 1.4E-143 T 06-07-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 LFZ55_RS06720 a1940b7016d85284a1627ef4f94e7476 688 SUPERFAMILY SSF143724 107 313 1.24E-58 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 SUPERFAMILY SSF51971 145 401 1.06E-68 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Gene3D G3DSA:1.10.1060.10 5 149 1.1E-46 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Gene3D G3DSA:3.40.50.720 150 236 2.9E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Gene3D G3DSA:3.40.50.720 401 471 2.9E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Gene3D G3DSA:3.50.50.60 237 400 1.5E-51 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 8.2E-38 T 06-07-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 8.9E-268 T 06-07-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 9.8E-27 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.0E-38 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.0E-38 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.0E-38 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.0E-38 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.0E-38 T 06-07-2017 LFZ55_RS02555 d1e0820d7e2002616fab55fb242eb525 472 SUPERFAMILY SSF46548 7 157 6.28E-41 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 06-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 06-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 SUPERFAMILY SSF53850 24 332 2.17E-80 T 06-07-2017 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 332 4.2E-183 T 06-07-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 Gene3D G3DSA:3.40.190.10 26 168 1.4E-43 T 06-07-2017 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 Gene3D G3DSA:3.40.190.10 177 301 5.5E-27 T 06-07-2017 LFZ55_RS07020 e4d99859e1deffb55d49e8b956f3d2ef 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 6.1E-40 T 06-07-2017 LFZ55_RS06910 f5656eefbb154ff7aaaed92cf72f420f 229 Pfam PF06249 Ethanolamine utilisation protein EutQ 81 228 5.5E-66 T 06-07-2017 IPR010424 Ethanolamine utilisation EutQ LFZ55_RS06910 f5656eefbb154ff7aaaed92cf72f420f 229 Gene3D G3DSA:2.60.120.10 98 228 1.7E-48 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS06910 f5656eefbb154ff7aaaed92cf72f420f 229 SUPERFAMILY SSF51182 103 226 3.11E-29 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS04900 671a99683e18bbb8b1c0b60a16da6c1c 126 Gene3D G3DSA:3.10.450.50 1 124 1.6E-45 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS04900 671a99683e18bbb8b1c0b60a16da6c1c 126 PIRSF PIRSF029394 1 126 6.7E-53 T 06-07-2017 IPR016918 Uncharacterised conserved protein UCP029394 LFZ55_RS04900 671a99683e18bbb8b1c0b60a16da6c1c 126 Pfam PF14534 Domain of unknown function (DUF4440) 24 112 4.0E-9 T 06-07-2017 IPR027843 Domain of unknown function DUF4440 LFZ55_RS04900 671a99683e18bbb8b1c0b60a16da6c1c 126 SUPERFAMILY SSF54427 2 124 1.94E-37 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS15795 fa1fe2ec8409f5d28316aec0a20b2f3f 208 SUPERFAMILY SSF52499 4 202 7.2E-54 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS15795 fa1fe2ec8409f5d28316aec0a20b2f3f 208 Gene3D G3DSA:3.40.50.850 4 205 3.1E-48 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS15795 fa1fe2ec8409f5d28316aec0a20b2f3f 208 Pfam PF00857 Isochorismatase family 14 165 1.3E-21 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS06195 67b82b454ab09fc56c116de8f23413cf 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.1E-33 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LFZ55_RS06195 67b82b454ab09fc56c116de8f23413cf 66 SUPERFAMILY SSF140319 3 64 6.02E-28 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LFZ55_RS06195 67b82b454ab09fc56c116de8f23413cf 66 PIRSF PIRSF039003 3 66 5.8E-34 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LFZ55_RS06195 67b82b454ab09fc56c116de8f23413cf 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 3.8E-33 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LFZ55_RS06195 67b82b454ab09fc56c116de8f23413cf 66 Gene3D G3DSA:1.10.10.600 1 66 5.8E-36 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 PIRSF PIRSF000456 5 262 1.2E-108 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Gene3D G3DSA:1.20.1180.10 197 262 1.0E-26 T 06-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 SUPERFAMILY SSF51161 2 261 1.18E-80 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Gene3D G3DSA:2.160.10.10 4 194 2.6E-50 T 06-07-2017 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.781 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 8.0E-9 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.7E-8 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 2.5E-29 T 06-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 LFZ55_RS19250 9c210df5784cf3270ec88f1a7ab1edbf 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 259 7.9E-113 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 3.1E-224 T 06-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 Gene3D G3DSA:3.90.1150.10 279 393 1.7E-35 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 Gene3D G3DSA:3.40.640.10 58 278 7.3E-97 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.968 T 06-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 SUPERFAMILY SSF53383 4 396 2.15E-127 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LFZ55_RS00695 3f130198ab0ecfd04d982d8aabc09f35 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.4E-78 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS23885 c1d293f5eeb8fc4ed85d5896f5564f42 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-20 T 06-07-2017 LFZ55_RS23885 c1d293f5eeb8fc4ed85d5896f5564f42 93 Gene3D G3DSA:3.10.50.40 5 91 1.8E-33 T 06-07-2017 LFZ55_RS23885 c1d293f5eeb8fc4ed85d5896f5564f42 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 LFZ55_RS23885 c1d293f5eeb8fc4ed85d5896f5564f42 93 SUPERFAMILY SSF54534 7 92 1.31E-27 T 06-07-2017 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 SUPERFAMILY SSF88946 15 122 2.09E-38 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 SUPERFAMILY SSF88659 200 283 4.3E-19 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 Pfam PF04545 Sigma-70, region 4 228 280 7.3E-17 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 4.4E-35 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 Pfam PF04542 Sigma-70 region 2 53 122 5.3E-17 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.259 T 06-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 Gene3D G3DSA:1.10.10.10 224 282 9.4E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 PIRSF PIRSF000770 9 284 9.2E-34 T 06-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 Gene3D G3DSA:1.10.601.10 14 122 4.2E-34 T 06-07-2017 LFZ55_RS01420 28f7fed410a0ac60a4807dfd5f4929f2 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 1.1E-129 T 06-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LFZ55_RS17945 b282d7f609f92aa3e68572f9334c6cd4 150 SUPERFAMILY SSF141322 107 149 3.79E-6 T 06-07-2017 LFZ55_RS17945 b282d7f609f92aa3e68572f9334c6cd4 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 6.0E-22 T 06-07-2017 IPR002810 NfeD-like, C-terminal domain LFZ55_RS17945 b282d7f609f92aa3e68572f9334c6cd4 150 Gene3D G3DSA:2.40.50.140 94 148 1.9E-8 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21460 29bd7b53c101aabadf48214c8c703d86 370 SMART SM00283 119 366 1.9E-84 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS21460 29bd7b53c101aabadf48214c8c703d86 370 Gene3D G3DSA:1.10.287.950 137 338 8.7E-60 T 06-07-2017 LFZ55_RS21460 29bd7b53c101aabadf48214c8c703d86 370 Pfam PF00672 HAMP domain 47 114 1.6E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS21460 29bd7b53c101aabadf48214c8c703d86 370 SUPERFAMILY SSF58104 98 367 8.11E-68 T 06-07-2017 LFZ55_RS21460 29bd7b53c101aabadf48214c8c703d86 370 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 173 365 3.1E-58 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 Pfam PF02687 FtsX-like permease family 527 641 9.7E-19 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 SUPERFAMILY SSF52540 4 225 1.77E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 SMART SM00382 33 220 2.7E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 Pfam PF00005 ABC transporter 24 172 3.2E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 7.0E-39 T 06-07-2017 IPR025857 MacB-like periplasmic core domain LFZ55_RS15920 b16ac71fa3afa65469b7928c1fc944d9 648 Gene3D G3DSA:3.40.50.300 3 234 8.5E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 498 552 5.3E-8 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 361 383 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 PRINTS PR01005 Flagellar hook-associated protein signature 409 426 3.4E-149 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 Pfam PF00460 Flagella basal body rod protein 5 35 3.3E-9 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 SUPERFAMILY SSF64518 136 551 1.57E-49 T 06-07-2017 LFZ55_RS14350 4fb82466a6d99127939970816d26206f 553 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 349 2.1E-82 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 PIRSF PIRSF006113 1 120 5.0E-55 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 7.3E-34 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 2.6E-33 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 SUPERFAMILY SSF55620 3 119 8.89E-41 T 06-07-2017 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 120 4.7E-39 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 LFZ55_RS04690 7475b93443562b5b972adb04b88dd63d 120 Gene3D G3DSA:3.30.479.10 2 120 1.2E-39 T 06-07-2017 LFZ55_RS07755 1878ada55a5551e0e24c56cb33253234 111 Pfam PF00892 EamA-like transporter family 6 107 2.1E-9 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS07755 1878ada55a5551e0e24c56cb33253234 111 SUPERFAMILY SSF103481 6 107 1.57E-15 T 06-07-2017 LFZ55_RS07755 1878ada55a5551e0e24c56cb33253234 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 29.729 T 06-07-2017 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 258 7.1E-47 T 06-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 SUPERFAMILY SSF52374 6 286 1.8E-86 T 06-07-2017 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 271 1.1E-110 T 06-07-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 Gene3D G3DSA:3.40.50.620 4 150 1.9E-38 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 Gene3D G3DSA:3.40.50.620 159 289 5.0E-20 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 40.722 T 06-07-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 4.9E-13 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 4.9E-13 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 4.9E-13 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 4.9E-13 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS19440 a49206392e540f050d2af1c13fbe8877 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 4.9E-13 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LFZ55_RS17080 863ab300dcd1fb7a42ff4fed6c981686 194 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 187 4.1E-86 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LFZ55_RS17080 863ab300dcd1fb7a42ff4fed6c981686 194 Pfam PF02669 K+-transporting ATPase, c chain 5 186 6.0E-65 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LFZ55_RS17080 863ab300dcd1fb7a42ff4fed6c981686 194 PIRSF PIRSF001296 1 192 5.9E-72 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LFZ55_RS17080 863ab300dcd1fb7a42ff4fed6c981686 194 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 31.909 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 06-07-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 SMART SM01232 129 221 4.5E-49 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.2E-31 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.346 T 06-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 SUPERFAMILY SSF46946 130 222 6.41E-31 T 06-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 SMART SM00898 2 115 4.0E-52 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Gene3D G3DSA:3.20.190.10 2 129 7.5E-38 T 06-07-2017 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.2E-107 T 06-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Gene3D G3DSA:1.10.8.50 130 269 5.6E-52 T 06-07-2017 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 SUPERFAMILY SSF81624 2 138 2.49E-43 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.4E-31 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 SUPERFAMILY SSF57716 217 269 1.48E-17 T 06-07-2017 LFZ55_RS00610 95bac88b5945150a13454655f2e83ebf 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 2.0E-10 T 06-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.0E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.5E-31 T 06-07-2017 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 Gene3D G3DSA:1.10.260.40 3 58 1.6E-25 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.1E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.1E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 SMART SM00354 2 72 4.3E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 SUPERFAMILY SSF53822 62 334 2.19E-74 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 Gene3D G3DSA:3.40.50.2300 170 331 1.7E-47 T 06-07-2017 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 SUPERFAMILY SSF47413 2 60 1.09E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS04360 306acba59c016a43997c221cea2f40a9 340 Gene3D G3DSA:3.40.50.2300 59 169 4.1E-42 T 06-07-2017 LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 SUPERFAMILY SSF51735 4 248 2.31E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.9E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 247 5.2E-61 T 06-07-2017 LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 Gene3D G3DSA:3.40.50.720 2 248 1.1E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14040 a22e55944b52e5ccdf9fdd1aa95e81dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.8E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 SUPERFAMILY SSF46689 235 283 1.79E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 1.7E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 1.7E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 Gene3D G3DSA:1.10.10.60 234 284 2.4E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 Pfam PF12833 Helix-turn-helix domain 205 282 4.4E-14 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22370 48744f119891e402b96d0f63d892fe8f 296 SMART SM00342 199 281 5.2E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Gene3D G3DSA:1.10.10.60 375 468 4.7E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Pfam PF00158 Sigma-54 interaction domain 151 314 9.9E-61 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Gene3D G3DSA:3.30.450.20 16 136 3.1E-13 T 06-07-2017 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 131 2.7E-8 T 06-07-2017 IPR000014 PAS domain LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Gene3D G3DSA:3.40.50.300 148 322 4.1E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Gene3D G3DSA:1.10.8.60 323 374 3.0E-18 T 06-07-2017 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 SUPERFAMILY SSF52540 151 389 7.14E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Pfam PF08448 PAS fold 19 127 5.6E-9 T 06-07-2017 IPR013656 PAS fold-4 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 SMART SM00382 171 313 8.8E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 Pfam PF02954 Bacterial regulatory protein, Fis family 428 466 1.9E-12 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 SUPERFAMILY SSF46689 363 468 3.08E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 SUPERFAMILY SSF55785 5 120 1.57E-12 T 06-07-2017 IPR000014 PAS domain LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.7E-10 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS07450 95759fedff22f07e76e3818386e1b003 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 1.7E-10 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 Gene3D G3DSA:1.20.1090.10 160 364 1.4E-71 T 06-07-2017 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 Gene3D G3DSA:3.40.50.1970 2 158 1.6E-43 T 06-07-2017 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 PIRSF PIRSF000112 1 360 6.3E-97 T 06-07-2017 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 SUPERFAMILY SSF56796 3 355 1.7E-89 T 06-07-2017 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.9E-65 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS22995 7bcb60ffca5035256cc5619abe1fbb59 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS06730 600b851126f7c372e1463131af267304 345 Gene3D G3DSA:3.30.1330.10 22 170 2.4E-62 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS06730 600b851126f7c372e1463131af267304 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 164 6.8E-15 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS06730 600b851126f7c372e1463131af267304 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.902 T 06-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS06730 600b851126f7c372e1463131af267304 345 SUPERFAMILY SSF55326 7 170 2.84E-52 T 06-07-2017 LFZ55_RS06730 600b851126f7c372e1463131af267304 345 Gene3D G3DSA:3.90.650.10 171 343 3.2E-69 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06730 600b851126f7c372e1463131af267304 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 8.8E-39 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS06730 600b851126f7c372e1463131af267304 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 1.7E-152 T 06-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS06730 600b851126f7c372e1463131af267304 345 SUPERFAMILY SSF56042 171 342 1.5E-64 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS12735 468ecbf0ce4ab3a8980d4a346e5d7d05 215 SUPERFAMILY SSF161098 12 204 1.96E-40 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS12735 468ecbf0ce4ab3a8980d4a346e5d7d05 215 Gene3D G3DSA:1.10.3720.10 9 203 7.6E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS12735 468ecbf0ce4ab3a8980d4a346e5d7d05 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 210 2.4E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS14480 38191a6140a7294e46d23221db3674ac 190 SUPERFAMILY SSF81342 5 180 2.51E-36 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS14480 38191a6140a7294e46d23221db3674ac 190 Gene3D G3DSA:1.20.950.20 92 174 5.0E-5 T 06-07-2017 LFZ55_RS14480 38191a6140a7294e46d23221db3674ac 190 Pfam PF01292 Prokaryotic cytochrome b561 9 180 7.3E-25 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 2.3E-75 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:3.40.50.300 552 642 2.0E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:3.40.50.300 286 387 2.0E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 2.3E-75 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 06-07-2017 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:1.10.486.10 388 541 1.5E-52 T 06-07-2017 LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 SUPERFAMILY SSF52540 7 642 2.79E-182 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:3.40.50.300 191 285 1.9E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:3.40.50.300 5 110 1.9E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23685 0f43074f7307b2e6daaa8cab360d84c2 720 Gene3D G3DSA:1.10.10.160 114 190 1.8E-26 T 06-07-2017 IPR013986 DExx box DNA helicase domain LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 Pfam PF00576 HIUase/Transthyretin family 28 135 1.8E-37 T 06-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 SUPERFAMILY SSF49472 25 136 5.62E-41 T 06-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 ProSitePatterns PS00768 Transthyretin signature 1. 31 46 - T 06-07-2017 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 SMART SM00095 23 135 0.0082 T 06-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 ProSitePatterns PS00769 Transthyretin signature 2. 119 131 - T 06-07-2017 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 PRINTS PR00189 Transthyretin signature 59 84 9.6E-14 T 06-07-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 PRINTS PR00189 Transthyretin signature 27 47 9.6E-14 T 06-07-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 PRINTS PR00189 Transthyretin signature 114 136 9.6E-14 T 06-07-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 Gene3D G3DSA:2.60.40.180 26 136 8.2E-43 T 06-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 LFZ55_RS15025 7799f3fd6c4e7e2300d7661ded54ccf1 136 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 27 136 6.2E-44 T 06-07-2017 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Pfam PF13432 Tetratricopeptide repeat 113 170 0.0073 T 06-07-2017 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SUPERFAMILY SSF48452 104 281 5.69E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.014 T 06-07-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SUPERFAMILY SSF48452 42 134 2.35E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SMART SM00028 180 213 53.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SMART SM00028 214 247 0.019 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SMART SM00028 69 102 59.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SMART SM00028 107 140 430.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 SMART SM00028 141 174 310.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Gene3D G3DSA:1.25.40.10 47 95 1.4E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Gene3D G3DSA:1.25.40.10 235 331 9.8E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Gene3D G3DSA:1.25.40.10 112 234 3.7E-19 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11250 4157233ae4bac65d42ca9939a800ff73 389 Pfam PF14559 Tetratricopeptide repeat 191 245 1.4E-6 T 06-07-2017 LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Gene3D G3DSA:3.30.70.20 129 165 1.3E-14 T 06-07-2017 LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 SUPERFAMILY SSF54862 36 215 3.35E-65 T 06-07-2017 LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Pfam PF00037 4Fe-4S binding domain 40 56 1.6E-4 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Pfam PF13247 4Fe-4S dicluster domain 83 181 5.5E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 4.7E-121 T 06-07-2017 IPR017567 Cytochrome c nitrite reductase, Fe-S protein LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Gene3D G3DSA:3.30.70.20 166 215 5.7E-34 T 06-07-2017 LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Gene3D G3DSA:3.30.70.20 36 96 5.7E-34 T 06-07-2017 LFZ55_RS22275 2bdc37886c61e388e9556cbe8eab1c61 223 Gene3D G3DSA:3.30.70.20 97 128 7.7E-12 T 06-07-2017 LFZ55_RS06295 53c9984f2288aa0f7168f541d7f4dafd 73 Gene3D G3DSA:2.10.290.10 1 69 2.8E-33 T 06-07-2017 IPR029037 YfgJ-like LFZ55_RS06295 53c9984f2288aa0f7168f541d7f4dafd 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 70 3.0E-34 T 06-07-2017 IPR010807 Protein of unknown function DUF1407 LFZ55_RS06295 53c9984f2288aa0f7168f541d7f4dafd 73 Pfam PF07191 zinc-ribbons 4 68 1.7E-29 T 06-07-2017 IPR010807 Protein of unknown function DUF1407 LFZ55_RS06295 53c9984f2288aa0f7168f541d7f4dafd 73 SUPERFAMILY SSF161187 1 69 1.96E-29 T 06-07-2017 IPR029037 YfgJ-like LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 SUPERFAMILY SSF69055 301 393 2.88E-31 T 06-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 SUPERFAMILY SSF51735 2 150 5.64E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 PIRSF PIRSF006205 1 398 1.1E-159 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Gene3D G3DSA:3.40.50.720 1 150 3.3E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 1.2E-190 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.7E-41 T 06-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Gene3D G3DSA:1.10.1740.10 313 394 9.0E-31 T 06-07-2017 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 6.0E-49 T 06-07-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 SUPERFAMILY SSF55347 126 274 2.45E-62 T 06-07-2017 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 6.3E-36 T 06-07-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS19295 7f8391b5563059229706d9124d714351 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.959 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 06-07-2017 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 06-07-2017 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-150 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 06-07-2017 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 06-07-2017 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 06-07-2017 LFZ55_RS02385 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 191 263 8.7E-31 T 06-07-2017 LFZ55_RS12795 90eaa1b2d0daa815830a2979c3f999b3 120 SUPERFAMILY SSF103481 6 106 5.36E-17 T 06-07-2017 LFZ55_RS12795 90eaa1b2d0daa815830a2979c3f999b3 120 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.5E-24 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 LFZ55_RS12795 90eaa1b2d0daa815830a2979c3f999b3 120 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 120 31.223 T 06-07-2017 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 LFZ55_RS20720 8b8418f4b0666ad3ca77955335edc5ca 153 Gene3D G3DSA:3.30.310.70 33 150 2.5E-28 T 06-07-2017 IPR005180 Domain of unknown function DUF302 LFZ55_RS20720 8b8418f4b0666ad3ca77955335edc5ca 153 Pfam PF03625 Domain of unknown function DUF302 63 123 4.3E-16 T 06-07-2017 IPR005180 Domain of unknown function DUF302 LFZ55_RS20720 8b8418f4b0666ad3ca77955335edc5ca 153 SUPERFAMILY SSF103247 36 149 7.98E-27 T 06-07-2017 IPR005180 Domain of unknown function DUF302 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 SUPERFAMILY SSF55681 115 421 4.97E-81 T 06-07-2017 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 419 36.115 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 Gene3D G3DSA:1.10.287.40 1 101 1.5E-11 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 Gene3D G3DSA:3.30.930.10 104 416 2.9E-122 T 06-07-2017 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 217 397 3.4E-30 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PIRSF PIRSF001529 1 422 3.3E-140 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 9.7E-29 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 9.7E-29 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 9.7E-29 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 9.7E-29 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 9.7E-29 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 103 2.1E-11 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 6.1E-143 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS14780 99dd634cc326a77d8c9b9945e3328ebd 422 SUPERFAMILY SSF46589 1 109 9.94E-13 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 LFZ55_RS07350 c94d7e7abd4b8503018cea5e2a138cb8 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 2.1E-43 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 Gene3D G3DSA:3.40.50.300 2 172 1.6E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.8E-29 T 06-07-2017 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.8E-29 T 06-07-2017 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.8E-29 T 06-07-2017 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.8E-29 T 06-07-2017 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.8E-29 T 06-07-2017 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.251 T 06-07-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 06-07-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 SUPERFAMILY SSF52540 4 170 1.25E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01755 515457a15024ceff2fa6714788414c73 173 Pfam PF01202 Shikimate kinase 13 170 2.9E-56 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS12115 8a19c8271237e2fa16a7b1d914655df4 85 Pfam PF02665 Nitrate reductase gamma subunit 6 84 7.2E-24 T 06-07-2017 IPR023234 NarG-like domain LFZ55_RS12115 8a19c8271237e2fa16a7b1d914655df4 85 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 85 8.3E-41 T 06-07-2017 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS12115 8a19c8271237e2fa16a7b1d914655df4 85 SUPERFAMILY SSF103501 4 84 2.35E-21 T 06-07-2017 IPR023234 NarG-like domain LFZ55_RS12115 8a19c8271237e2fa16a7b1d914655df4 85 Gene3D G3DSA:1.20.950.20 5 76 4.1E-19 T 06-07-2017 LFZ55_RS20905 44718e5ce10f47861a872373cfb33acc 136 Pfam PF12101 Protein of unknown function (DUF3577) 2 131 4.6E-54 T 06-07-2017 IPR021960 Protein of unknown function DUF3577 LFZ55_RS04740 786476faac2fac88b3f7c49b1e6c5b90 178 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 25 168 1.9E-21 T 06-07-2017 IPR013382 CRISPR-associated protein Cse2 LFZ55_RS04740 786476faac2fac88b3f7c49b1e6c5b90 178 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 12 170 3.0E-30 T 06-07-2017 IPR013382 CRISPR-associated protein Cse2 LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 SUPERFAMILY SSF82861 100 184 3.01E-12 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 SUPERFAMILY SSF50182 186 250 1.54E-13 T 06-07-2017 IPR010920 LSM domain LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 Gene3D G3DSA:2.30.30.60 201 250 3.3E-15 T 06-07-2017 LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 Pfam PF00924 Mechanosensitive ion channel 143 342 3.7E-52 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 Gene3D G3DSA:3.30.70.100 254 341 4.8E-4 T 06-07-2017 LFZ55_RS13935 fa3a45ca4378ae9c5e6634ba9c746e23 377 SUPERFAMILY SSF82689 252 351 7.32E-12 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 SUPERFAMILY SSF51246 328 424 1.49E-33 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 SMART SM01209 103 296 8.7E-143 T 06-07-2017 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 SUPERFAMILY SSF56059 104 325 8.84E-70 T 06-07-2017 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.278 T 06-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 1.0E-189 T 06-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 06-07-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 SMART SM01210 330 424 5.6E-56 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Gene3D G3DSA:3.30.1490.20 121 190 6.5E-34 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.1E-36 T 06-07-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Gene3D G3DSA:3.30.470.20 191 328 7.0E-65 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.3E-84 T 06-07-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 1.1E-29 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 SUPERFAMILY SSF52440 1 103 7.19E-38 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Gene3D G3DSA:3.90.600.10 330 424 9.8E-36 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LFZ55_RS22705 432918bbe89b95759556a6445ffaa1fd 429 Gene3D G3DSA:3.40.50.20 2 95 4.0E-39 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS21790 26e597ebad3a9663bd718cedf91eb08d 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 50.756 T 06-07-2017 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 LFZ55_RS21790 26e597ebad3a9663bd718cedf91eb08d 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 270 2.6E-58 T 06-07-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 LFZ55_RS21790 26e597ebad3a9663bd718cedf91eb08d 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 7.0E-98 T 06-07-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 LFZ55_RS10485 b690318621b67e564b47c07e11a51d8b 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 150 42.561 T 06-07-2017 IPR008228 Uncharacterised conserved protein UCP006173 LFZ55_RS10485 b690318621b67e564b47c07e11a51d8b 153 PIRSF PIRSF006173 3 150 1.2E-68 T 06-07-2017 IPR008228 Uncharacterised conserved protein UCP006173 LFZ55_RS10485 b690318621b67e564b47c07e11a51d8b 153 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 4.5E-8 T 06-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 SUPERFAMILY SSF52540 314 563 6.29E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 SUPERFAMILY SSF52540 12 268 3.47E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 SMART SM00382 349 549 3.9E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 SMART SM00382 41 246 2.5E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Gene3D G3DSA:3.40.50.300 12 270 1.5E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Gene3D G3DSA:3.40.50.300 312 565 2.1E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 1.3E-7 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 3.8E-8 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Pfam PF00005 ABC transporter 33 196 3.9E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16375 50df81dca2222093ae1fc9ae6d1abd41 623 Pfam PF00005 ABC transporter 341 491 1.5E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 06-07-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 SUPERFAMILY SSF53383 6 416 8.97E-185 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 PIRSF PIRSF000412 1 417 8.1E-176 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.526 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 Gene3D G3DSA:3.90.1150.10 286 416 8.2E-56 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.3E-189 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 LFZ55_RS06110 39184a4243652508a7c6bd48fa03c1a3 417 Gene3D G3DSA:3.40.640.10 37 285 6.2E-108 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS16490 068f8d6c40a1ed55e7db5862b7045337 740 Gene3D G3DSA:2.30.30.60 574 614 3.3E-8 T 06-07-2017 LFZ55_RS16490 068f8d6c40a1ed55e7db5862b7045337 740 SUPERFAMILY SSF50182 556 614 1.28E-9 T 06-07-2017 IPR010920 LSM domain LFZ55_RS16490 068f8d6c40a1ed55e7db5862b7045337 740 Pfam PF00924 Mechanosensitive ion channel 513 712 7.3E-43 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS16490 068f8d6c40a1ed55e7db5862b7045337 740 SUPERFAMILY SSF82861 474 554 3.4E-12 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS16490 068f8d6c40a1ed55e7db5862b7045337 740 SUPERFAMILY SSF82689 625 720 7.59E-8 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 Gene3D G3DSA:3.40.30.10 99 234 6.6E-53 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 SUPERFAMILY SSF54423 23 81 3.01E-18 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 6.8E-15 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 Gene3D G3DSA:3.10.450.70 22 82 3.8E-27 T 06-07-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 SUPERFAMILY SSF52833 85 233 1.75E-43 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 Pfam PF13098 Thioredoxin-like domain 105 227 9.8E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS04150 b3bf6359d69e6294e99d5eb98c0dde92 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 SMART SM00226 3 141 8.7E-60 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 4.2E-29 T 06-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 4.2E-29 T 06-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 4.2E-29 T 06-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 4.2E-29 T 06-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 4.2E-29 T 06-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 3.5E-43 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 SUPERFAMILY SSF52788 1 142 7.33E-43 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LFZ55_RS08680 d717e29d6a7124fcc33d59115d1121ed 149 Gene3D G3DSA:3.40.50.270 2 145 8.8E-45 T 06-07-2017 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.203 T 06-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 6.3E-189 T 06-07-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 Gene3D G3DSA:3.40.50.1100 177 392 9.1E-94 T 06-07-2017 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 374 1.6E-51 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 SUPERFAMILY SSF53686 5 390 4.06E-143 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 Gene3D G3DSA:3.40.50.1100 97 176 6.5E-21 T 06-07-2017 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 06-07-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11140 19263d74e60a1e0978204d31a295e1c8 397 PIRSF PIRSF001413 1 397 7.9E-174 T 06-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 SMART SM00869 507 759 1.3E-31 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 SUPERFAMILY SSF51126 57 465 1.44E-29 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 PRINTS PR01484 Pertactin virulence factor family signature 548 572 3.4E-9 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 PRINTS PR01484 Pertactin virulence factor family signature 487 505 3.4E-9 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 PRINTS PR01484 Pertactin virulence factor family signature 725 750 3.4E-9 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 PRINTS PR01484 Pertactin virulence factor family signature 658 681 3.4E-9 T 06-07-2017 IPR003991 Pertactin virulence factor family GO:0007155 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 Gene3D G3DSA:2.40.128.130 468 751 8.5E-57 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 366 751 1.3E-79 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 Gene3D G3DSA:2.160.20.20 26 467 5.6E-40 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 SUPERFAMILY SSF103515 473 750 1.7E-40 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 Pfam PF03797 Autotransporter beta-domain 506 749 4.8E-38 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS20880 c63293dcb119867b76654fdb58c61009 769 Pfam PF03212 Pertactin 353 464 4.7E-34 T 06-07-2017 IPR004899 Pertactin, central region LFZ55_RS03865 975bff05350aadbb7c0b0b78f43d1502 165 SMART SM00731 16 165 6.5E-61 T 06-07-2017 IPR006640 SprT-like LFZ55_RS03865 975bff05350aadbb7c0b0b78f43d1502 165 Pfam PF10263 SprT-like family 19 162 5.0E-26 T 06-07-2017 IPR006640 SprT-like LFZ55_RS03865 975bff05350aadbb7c0b0b78f43d1502 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 39.793 T 06-07-2017 IPR023483 Uncharacterised protein family SprT LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Gene3D G3DSA:2.70.20.10 369 488 1.7E-49 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Gene3D G3DSA:2.70.20.10 219 252 1.7E-49 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 SUPERFAMILY SSF56712 1 607 4.58E-188 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Gene3D G3DSA:3.40.50.140 1 153 1.1E-45 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.0E-25 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.0E-25 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.0E-25 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.0E-25 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.0E-25 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Pfam PF01131 DNA topoisomerase 158 593 9.2E-115 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 644 71.992 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 SMART SM00436 128 223 1.5E-34 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 SMART SM00437 280 558 5.2E-108 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Pfam PF01751 Toprim domain 3 134 9.0E-17 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 SMART SM00493 1 124 1.4E-29 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Gene3D G3DSA:1.10.460.10 158 217 7.6E-53 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 Gene3D G3DSA:1.10.460.10 490 607 7.6E-53 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS13700 be9c6f71aa3ae94d2e7ad1c3175873cf 649 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 646 4.2E-302 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 4.1E-111 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Gene3D G3DSA:3.40.50.740 121 206 1.7E-81 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Gene3D G3DSA:3.40.50.740 411 654 1.7E-81 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 1.5E-16 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Gene3D G3DSA:2.40.40.20 670 814 1.4E-59 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 SMART SM00926 56 116 1.6E-10 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 SUPERFAMILY SSF53706 57 697 4.45E-182 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Gene3D G3DSA:2.20.25.90 55 120 6.3E-17 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 SUPERFAMILY SSF50692 641 814 2.15E-41 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Gene3D G3DSA:3.40.228.10 207 410 1.6E-77 T 06-07-2017 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 8.4E-4 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS15810 015ee17dbd12ecbf5dde31126f626f71 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 2.8E-29 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS23300 aa29ef549773584255836180f88a92ad 124 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 119 10.027 T 06-07-2017 IPR022907 VapC family GO:0004540 LFZ55_RS23300 aa29ef549773584255836180f88a92ad 124 Pfam PF01850 PIN domain 7 112 6.2E-17 T 06-07-2017 IPR002716 PIN domain LFZ55_RS23300 aa29ef549773584255836180f88a92ad 124 Gene3D G3DSA:3.40.50.1010 5 118 6.0E-26 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS23300 aa29ef549773584255836180f88a92ad 124 SUPERFAMILY SSF88723 5 120 1.07E-28 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS07950 0c80645f2d3f32cc3672b45d8472c323 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 2.0E-77 T 06-07-2017 IPR005126 NapC/NirT cytochrome c, N-terminal LFZ55_RS07950 0c80645f2d3f32cc3672b45d8472c323 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 9.8E-105 T 06-07-2017 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 LFZ55_RS07950 0c80645f2d3f32cc3672b45d8472c323 200 Gene3D G3DSA:1.10.3820.10 22 193 4.2E-28 T 06-07-2017 LFZ55_RS07950 0c80645f2d3f32cc3672b45d8472c323 200 PIRSF PIRSF000013 1 200 7.4E-107 T 06-07-2017 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 LFZ55_RS07950 0c80645f2d3f32cc3672b45d8472c323 200 SUPERFAMILY SSF48695 17 197 1.36E-65 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS06035 00835e12e2c686b0de6ca37267fdb354 454 Pfam PF02378 Phosphotransferase system, EIIC 118 392 5.0E-33 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS06035 00835e12e2c686b0de6ca37267fdb354 454 Gene3D G3DSA:3.30.1360.60 4 81 1.1E-22 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS06035 00835e12e2c686b0de6ca37267fdb354 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS06035 00835e12e2c686b0de6ca37267fdb354 454 Pfam PF00367 phosphotransferase system, EIIB 10 42 8.6E-11 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS06035 00835e12e2c686b0de6ca37267fdb354 454 SUPERFAMILY SSF55604 7 78 4.18E-16 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 SUPERFAMILY SSF48600 30 177 1.67E-36 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 Gene3D G3DSA:1.20.59.10 31 100 2.3E-11 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 24 133 1.2E-34 T 06-07-2017 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 SMART SM00830 20 101 6.5E-16 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 Pfam PF01817 Chorismate mutase type II 33 99 2.0E-13 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS13885 03ef73f651c3318218a11fd7b9f6ad7e 181 PIRSF PIRSF026640 1 181 6.5E-64 T 06-07-2017 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Gene3D G3DSA:3.40.50.720 547 625 1.8E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Gene3D G3DSA:3.40.50.720 331 546 2.6E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Pfam PF13450 NAD(P)-binding Rossmann-like domain 332 366 8.0E-9 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Gene3D G3DSA:1.10.1060.10 192 330 1.3E-41 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Gene3D G3DSA:3.30.70.20 5 166 5.9E-25 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 SUPERFAMILY SSF54862 196 295 1.67E-39 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 SUPERFAMILY SSF54862 1 161 1.67E-39 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 204 315 2.3E-35 T 06-07-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 SUPERFAMILY SSF51971 327 556 2.53E-63 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Pfam PF13247 4Fe-4S dicluster domain 55 144 1.3E-8 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 443 614 7.0E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 1.1E-20 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 1.1E-20 T 06-07-2017 LFZ55_RS06840 6b2107b79c6c1780d011b838810d494f 627 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 1.1E-20 T 06-07-2017 LFZ55_RS21610 d581327fa7cc7d22c9eb2654156692bd 284 SUPERFAMILY SSF51658 21 271 1.7E-55 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS21610 d581327fa7cc7d22c9eb2654156692bd 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 281 2.0E-150 T 06-07-2017 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 LFZ55_RS21610 d581327fa7cc7d22c9eb2654156692bd 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 1.5E-33 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS21610 d581327fa7cc7d22c9eb2654156692bd 284 Hamap MF_01951 L-ribulose-5-phosphate 3-epimerase UlaE [ulaE]. 1 284 79.403 T 06-07-2017 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae GO:0034015 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 LFZ55_RS21610 d581327fa7cc7d22c9eb2654156692bd 284 Gene3D G3DSA:3.20.20.150 4 273 2.3E-49 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:1.10.486.10 383 525 3.6E-40 T 06-07-2017 LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 SUPERFAMILY SSF52540 2 636 6.49E-161 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.09 T 06-07-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 06-07-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:1.10.10.160 108 181 4.1E-23 T 06-07-2017 IPR013986 DExx box DNA helicase domain LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 6.4E-70 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:3.40.50.300 550 637 3.1E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:3.40.50.300 280 382 3.1E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:3.40.50.300 2 104 6.1E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Gene3D G3DSA:3.40.50.300 182 279 6.1E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23865 72a16dcd4c816f59e09936261ad24a2b 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.3E-72 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 Pfam PF00128 Alpha amylase, catalytic domain 225 593 3.0E-36 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 PIRSF PIRSF036917 1 675 0.0 T 06-07-2017 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 SMART SM00642 192 636 2.6E-81 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 SUPERFAMILY SSF51445 180 317 3.99E-72 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 SUPERFAMILY SSF51445 346 642 3.99E-72 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS00885 364591ea3345a8c09c392124567ccfee 675 Gene3D G3DSA:3.20.20.80 182 643 2.3E-83 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS08710 9ff900ea8b4e68f0ae3ab520de0a3ca7 248 Pfam PF00535 Glycosyl transferase family 2 4 133 1.2E-15 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS08710 9ff900ea8b4e68f0ae3ab520de0a3ca7 248 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 248 2.3E-156 T 06-07-2017 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE LFZ55_RS08710 9ff900ea8b4e68f0ae3ab520de0a3ca7 248 SUPERFAMILY SSF53448 1 222 1.03E-28 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08710 9ff900ea8b4e68f0ae3ab520de0a3ca7 248 Gene3D G3DSA:3.90.550.10 1 198 3.4E-21 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS15980 c87b071b8fdd90aa44ba4907b3d13e4f 276 SMART SM00644 32 178 1.1E-37 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15980 c87b071b8fdd90aa44ba4907b3d13e4f 276 SUPERFAMILY SSF55846 24 194 7.98E-51 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15980 c87b071b8fdd90aa44ba4907b3d13e4f 276 SUPERFAMILY SSF47090 198 273 1.26E-20 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15980 c87b071b8fdd90aa44ba4907b3d13e4f 276 Gene3D G3DSA:3.40.80.10 35 197 5.7E-56 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15980 c87b071b8fdd90aa44ba4907b3d13e4f 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 4.4E-19 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS05125 e232a29a8ea5f87139486b7741a9c133 373 PIRSF PIRSF005622 1 372 6.5E-159 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 LFZ55_RS05125 e232a29a8ea5f87139486b7741a9c133 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 1.5E-175 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 LFZ55_RS05125 e232a29a8ea5f87139486b7741a9c133 373 Pfam PF01924 Hydrogenase formation hypA family 15 367 3.8E-151 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 LFZ55_RS11875 08f92dcf53ec4f90424d2b52a86f0fae 145 SUPERFAMILY SSF55729 1 142 5.4E-34 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS11875 08f92dcf53ec4f90424d2b52a86f0fae 145 Pfam PF00583 Acetyltransferase (GNAT) family 50 133 9.0E-14 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS11875 08f92dcf53ec4f90424d2b52a86f0fae 145 Gene3D G3DSA:3.40.630.30 1 143 1.1E-35 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS11875 08f92dcf53ec4f90424d2b52a86f0fae 145 PIRSF PIRSF000452 1 145 7.3E-52 T 06-07-2017 IPR024170 Aminoglycoside N6-acetyltransferase LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 Gene3D G3DSA:3.40.309.10 223 373 2.1E-39 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 Gene3D G3DSA:3.40.605.10 374 415 9.4E-104 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 Gene3D G3DSA:3.40.605.10 2 220 9.4E-104 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 SUPERFAMILY SSF53720 3 415 6.02E-112 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 405 5.9E-191 T 06-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 Pfam PF00171 Aldehyde dehydrogenase family 8 280 2.9E-16 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 06-07-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 PIRSF PIRSF000151 1 416 1.4E-173 T 06-07-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 LFZ55_RS18990 552f06aacf154d15dff2b4a03a211c72 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 415 41.244 T 06-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 Gene3D G3DSA:3.40.50.620 173 333 1.3E-37 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 SMART SM00981 75 165 2.8E-27 T 06-07-2017 IPR004114 THUMP domain GO:0003723 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 1.6E-40 T 06-07-2017 IPR026340 Thiazole biosynthesis domain GO:0052837 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 9.7E-81 T 06-07-2017 IPR020536 Thil, AANH domain GO:0004810 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 Gene3D G3DSA:3.40.250.10 407 480 6.3E-7 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 SUPERFAMILY SSF143437 1 173 1.67E-51 T 06-07-2017 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 Pfam PF02926 THUMP domain 28 161 1.8E-29 T 06-07-2017 IPR004114 THUMP domain GO:0003723 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 SUPERFAMILY SSF52821 407 481 2.43E-8 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 5.3E-146 T 06-07-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 SUPERFAMILY SSF52402 174 372 9.92E-42 T 06-07-2017 LFZ55_RS18320 a557ba5d356df35fc95dc99f4b5271dd 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 233.426 T 06-07-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 LFZ55_RS20280 d96a294f9d987e3efeea5b61a450d85a 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 176 1.3E-41 T 06-07-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 LFZ55_RS20280 d96a294f9d987e3efeea5b61a450d85a 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 06-07-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 PIRSF PIRSF000185 10 423 3.5E-159 T 06-07-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 Gene3D G3DSA:3.40.50.720 188 422 6.2E-80 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 06-07-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 SUPERFAMILY SSF51735 188 423 1.67E-72 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 420 2.2E-73 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 SUPERFAMILY SSF53223 11 190 1.15E-68 T 06-07-2017 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 SMART SM00839 190 420 3.1E-89 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 Gene3D G3DSA:3.40.192.10 46 186 3.9E-57 T 06-07-2017 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 42 170 3.1E-54 T 06-07-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 6.4E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 6.4E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 6.4E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS10565 8d210d3b6ff9162b52234ab01ad48ad0 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 6.4E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 LFZ55_RS05610 d131009c3aa12505cbeb956a4d8d5867 196 SUPERFAMILY SSF49401 34 195 3.73E-27 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS05610 d131009c3aa12505cbeb956a4d8d5867 196 Gene3D G3DSA:2.60.40.1090 33 195 3.9E-31 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS05610 d131009c3aa12505cbeb956a4d8d5867 196 Pfam PF00419 Fimbrial protein 35 195 3.1E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 Pfam PF00248 Aldo/keto reductase family 18 260 1.4E-50 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.0E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.0E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.0E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.0E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.0E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 Gene3D G3DSA:3.20.20.100 5 271 2.6E-102 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 SUPERFAMILY SSF51430 6 268 6.55E-91 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS03405 bd447538983dc94dbd0a45a55dfe2245 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 Hamap MF_00520 Ribulokinase [araB]. 1 558 61.209 T 06-07-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 5.3E-266 T 06-07-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 2.1E-36 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 Gene3D G3DSA:3.30.420.40 3 282 5.2E-28 T 06-07-2017 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 Gene3D G3DSA:3.30.420.40 285 542 5.3E-42 T 06-07-2017 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 SUPERFAMILY SSF53067 285 543 2.85E-42 T 06-07-2017 LFZ55_RS19885 26fc13a0497940770d0d713f231d65de 569 SUPERFAMILY SSF53067 5 284 3.79E-21 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 PIRSF PIRSF001123 1 344 1.9E-112 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 SUPERFAMILY SSF53187 3 77 1.52E-62 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 SUPERFAMILY SSF53187 158 340 1.52E-62 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 SUPERFAMILY SSF101821 67 166 4.58E-19 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 Gene3D G3DSA:3.40.630.10 3 70 6.9E-78 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 Gene3D G3DSA:3.40.630.10 157 343 6.9E-78 T 06-07-2017 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 Pfam PF05343 M42 glutamyl aminopeptidase 43 325 1.2E-81 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS07220 f302b923edf85b75cf4fed1ebcc25c4d 346 Gene3D G3DSA:2.40.30.40 71 148 2.3E-24 T 06-07-2017 IPR023367 Peptidase M42, domain 2 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 Pfam PF01726 LexA DNA binding domain 1 65 4.0E-31 T 06-07-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.661 T 06-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 2.2E-86 T 06-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 Gene3D G3DSA:2.10.109.10 76 198 5.2E-47 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LFZ55_RS22505 7871428039612191a9174215e94cc917 202 Pfam PF00717 Peptidase S24-like 114 179 2.5E-15 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B LFZ55_RS22505 7871428039612191a9174215e94cc917 202 SUPERFAMILY SSF51306 76 198 3.14E-38 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LFZ55_RS22505 7871428039612191a9174215e94cc917 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.4E-14 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.4E-14 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.4E-14 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LFZ55_RS22505 7871428039612191a9174215e94cc917 202 Gene3D G3DSA:1.10.10.10 1 69 1.9E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22505 7871428039612191a9174215e94cc917 202 SUPERFAMILY SSF46785 3 70 1.82E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 794 0.0 T 06-07-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 7.3E-304 T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 PIRSF PIRSF000460 1 797 3.2E-202 T 06-07-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 SUPERFAMILY SSF53756 5 795 2.04E-291 T 06-07-2017 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 Gene3D G3DSA:3.40.50.2000 5 462 2.7E-179 T 06-07-2017 LFZ55_RS01610 481cd330ec585025596a26e4838658dd 797 Gene3D G3DSA:3.40.50.2000 463 780 8.8E-135 T 06-07-2017 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 1.9E-187 T 06-07-2017 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 Pfam PF00005 ABC transporter 369 513 1.7E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 SUPERFAMILY SSF90123 11 331 3.92E-54 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 Pfam PF00664 ABC transporter transmembrane region 26 291 6.7E-49 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 Gene3D G3DSA:1.20.1560.10 21 331 7.5E-45 T 06-07-2017 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 Gene3D G3DSA:3.40.50.300 361 579 2.0E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 SMART SM00382 375 560 1.9E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS15855 bb79a4cab89f12e2e70f470e0e401799 588 SUPERFAMILY SSF52540 362 582 2.91E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09105 80409081157474f8630d6a6988546036 351 Gene3D G3DSA:3.30.420.180 225 348 2.7E-27 T 06-07-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LFZ55_RS09105 80409081157474f8630d6a6988546036 351 Pfam PF11760 Cobalamin synthesis G N-terminal 54 134 2.3E-35 T 06-07-2017 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 LFZ55_RS09105 80409081157474f8630d6a6988546036 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 3.2E-24 T 06-07-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LFZ55_RS09105 80409081157474f8630d6a6988546036 351 Pfam PF11761 Cobalamin biosynthesis central region 140 217 5.2E-7 T 06-07-2017 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 LFZ55_RS09105 80409081157474f8630d6a6988546036 351 SUPERFAMILY SSF159672 6 238 3.92E-58 T 06-07-2017 LFZ55_RS09105 80409081157474f8630d6a6988546036 351 SUPERFAMILY SSF159664 224 349 2.62E-31 T 06-07-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 Gene3D G3DSA:1.25.50.10 547 869 7.6E-127 T 06-07-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 Pfam PF01433 Peptidase family M1 111 384 3.4E-69 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 7.2E-138 T 06-07-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 06-07-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 SUPERFAMILY SSF63737 1 193 1.83E-45 T 06-07-2017 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.1E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.1E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.1E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.1E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 1.1E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 Gene3D G3DSA:1.10.390.10 308 451 8.9E-36 T 06-07-2017 LFZ55_RS15615 9bcc01370df05d46deb5df39a8b3531e 870 SUPERFAMILY SSF55486 204 450 9.52E-76 T 06-07-2017 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 SUPERFAMILY SSF52794 6 105 3.84E-33 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 Gene3D G3DSA:3.40.50.2300 3 107 3.0E-38 T 06-07-2017 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 9 101 2.2E-17 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 Pfam PF02378 Phosphotransferase system, EIIC 134 406 1.4E-25 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 124 452 2.2E-58 T 06-07-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LFZ55_RS23245 15bef65d1d78fb51b6f319b47d437b0a 481 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 8 94 4.4E-31 T 06-07-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 06-07-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 SUPERFAMILY SSF100950 1 263 7.12E-106 T 06-07-2017 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.418 T 06-07-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 Gene3D G3DSA:3.40.50.1360 1 264 1.4E-113 T 06-07-2017 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 2.4E-22 T 06-07-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 LFZ55_RS17185 ae2caa8a4751b3b654220f82a51e73d2 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 5.1E-144 T 06-07-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LFZ55_RS17595 956534f68c0e3cd68c787305f3e935ac 318 Gene3D G3DSA:3.40.50.1980 29 157 1.1E-23 T 06-07-2017 LFZ55_RS17595 956534f68c0e3cd68c787305f3e935ac 318 Gene3D G3DSA:3.40.50.1980 158 318 4.4E-38 T 06-07-2017 LFZ55_RS17595 956534f68c0e3cd68c787305f3e935ac 318 Pfam PF01497 Periplasmic binding protein 49 297 2.9E-27 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LFZ55_RS17595 956534f68c0e3cd68c787305f3e935ac 318 SUPERFAMILY SSF53807 31 317 3.45E-45 T 06-07-2017 LFZ55_RS08520 c3089cb7e0bf35b4258ea338515ed64e 828 Pfam PF13954 PapC N-terminal domain 26 163 7.2E-33 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS08520 c3089cb7e0bf35b4258ea338515ed64e 828 Pfam PF13953 PapC C-terminal domain 757 815 6.0E-10 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS08520 c3089cb7e0bf35b4258ea338515ed64e 828 SUPERFAMILY SSF141729 49 155 2.22E-26 T 06-07-2017 LFZ55_RS08520 c3089cb7e0bf35b4258ea338515ed64e 828 Pfam PF00577 Outer membrane usher protein 179 745 1.3E-178 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08520 c3089cb7e0bf35b4258ea338515ed64e 828 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 291 301 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS03435 28048839a1ddae4f5e14746c8a70db0e 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 7.3E-101 T 06-07-2017 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 LFZ55_RS03435 28048839a1ddae4f5e14746c8a70db0e 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 205 8.7E-35 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LFZ55_RS11820 f168718708a215239ded1356c36dc04a 126 Pfam PF05876 Phage terminase large subunit (GpA) 1 122 1.4E-23 T 06-07-2017 IPR008866 Bacteriophage lambda, GpA LFZ55_RS09805 c0219998e4d30b672153a2fc3368fb8b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 4.4E-42 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LFZ55_RS09805 c0219998e4d30b672153a2fc3368fb8b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 101 2.0E-47 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LFZ55_RS09805 c0219998e4d30b672153a2fc3368fb8b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 4 107 28.478 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LFZ55_RS09805 c0219998e4d30b672153a2fc3368fb8b 116 SUPERFAMILY SSF63592 4 101 9.02E-40 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 SMART SM00481 14 81 4.6E-18 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 Pfam PF02811 PHP domain 15 143 1.4E-7 T 06-07-2017 IPR004013 PHP domain GO:0003824 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 SUPERFAMILY SSF89550 176 289 1.1E-51 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 SUPERFAMILY SSF89550 13 94 1.1E-51 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 Gene3D G3DSA:3.20.20.140 14 99 5.2E-42 T 06-07-2017 LFZ55_RS11165 03659c44dae7d928db9a99b536296e0c 293 Gene3D G3DSA:3.20.20.140 168 272 5.2E-42 T 06-07-2017 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Gene3D G3DSA:3.30.870.10 316 460 6.9E-35 T 06-07-2017 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 3.6E-221 T 06-07-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 SMART SM00155 399 426 8.2E-6 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 SMART SM00155 219 246 1.4E-4 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 3.9E-6 T 06-07-2017 IPR027379 Cardiolipin synthase N-terminal LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Pfam PF13091 PLD-like domain 332 445 2.7E-22 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Pfam PF13091 PLD-like domain 134 244 4.6E-11 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 SUPERFAMILY SSF56024 66 315 3.77E-45 T 06-07-2017 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 SUPERFAMILY SSF56024 274 473 1.59E-47 T 06-07-2017 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Gene3D G3DSA:3.30.870.10 111 315 5.1E-35 T 06-07-2017 LFZ55_RS11070 005720bf47ad24a83c28ca15077218f3 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.541 T 06-07-2017 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 Gene3D G3DSA:3.30.300.70 6 83 1.6E-33 T 06-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 SUPERFAMILY SSF75420 6 86 1.7E-25 T 06-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 10 154 24.196 T 06-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 SUPERFAMILY SSF74942 87 154 3.14E-16 T 06-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 Pfam PF02576 Putative ribosome maturation factor RimP 16 150 2.1E-48 T 06-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 LFZ55_RS02780 a5a367c1bd23873261aa117f54611878 154 Gene3D G3DSA:2.30.30.180 91 151 9.2E-13 T 06-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal LFZ55_RS09480 859934b7287549283c8eeaad0abb3215 306 SUPERFAMILY SSF103481 185 287 2.88E-12 T 06-07-2017 LFZ55_RS09480 859934b7287549283c8eeaad0abb3215 306 SUPERFAMILY SSF103481 43 144 2.88E-11 T 06-07-2017 LFZ55_RS09480 859934b7287549283c8eeaad0abb3215 306 Pfam PF00892 EamA-like transporter family 150 284 5.9E-17 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS09480 859934b7287549283c8eeaad0abb3215 306 Pfam PF00892 EamA-like transporter family 14 140 4.2E-23 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS00025 30dd70584b35a76dcaa591dcceb69262 110 Gene3D G3DSA:2.60.120.10 2 106 1.1E-29 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS00025 30dd70584b35a76dcaa591dcceb69262 110 Pfam PF07883 Cupin domain 33 96 6.2E-13 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS00025 30dd70584b35a76dcaa591dcceb69262 110 SUPERFAMILY SSF51182 13 100 9.77E-22 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS00025 30dd70584b35a76dcaa591dcceb69262 110 PIRSF PIRSF029883 1 110 1.6E-35 T 06-07-2017 IPR025499 Pectin degradation protein KdgF LFZ55_RS15085 cfb90e1d76868eb32de723437881030d 445 Gene3D G3DSA:1.25.40.10 81 131 3.3E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15085 cfb90e1d76868eb32de723437881030d 445 Pfam PF04575 Protein of unknown function (DUF560) 158 445 1.1E-81 T 06-07-2017 IPR007655 Protein of unknown function DUF560 LFZ55_RS15085 cfb90e1d76868eb32de723437881030d 445 SUPERFAMILY SSF48452 59 126 7.59E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 Pfam PF01050 Mannose-6-phosphate isomerase 319 469 3.1E-75 T 06-07-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 Gene3D G3DSA:3.90.550.10 2 275 2.1E-100 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 473 1.5E-240 T 06-07-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 Pfam PF00483 Nucleotidyl transferase 4 289 3.9E-78 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 Gene3D G3DSA:2.60.120.10 361 473 1.3E-47 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 SUPERFAMILY SSF53448 1 286 1.43E-73 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08790 3c98ae64043ec492a3ff2b2256643262 474 SUPERFAMILY SSF51182 189 473 4.5E-90 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.699 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 3.2E-62 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 Gene3D G3DSA:3.90.226.10 58 276 1.9E-49 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 SUPERFAMILY SSF52096 5 318 1.88E-103 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19230 62f8aaf6c4e6e31de14a0497ae42b491 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.7E-173 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 Gene3D G3DSA:3.40.190.10 22 167 1.6E-26 T 06-07-2017 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 5.4E-151 T 06-07-2017 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 06-07-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 6.1E-183 T 06-07-2017 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 Gene3D G3DSA:3.40.190.10 179 284 5.6E-8 T 06-07-2017 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 SUPERFAMILY SSF53850 22 323 1.23E-63 T 06-07-2017 LFZ55_RS19860 81b4a2226fdbbc5a411934b877bc4ba3 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 291 5.9E-18 T 06-07-2017 LFZ55_RS24010 8e0dc2f5ec4258c3e784cd28e70750a8 139 Gene3D G3DSA:3.40.1650.10 1 139 4.0E-44 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS24010 8e0dc2f5ec4258c3e784cd28e70750a8 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.3E-47 T 06-07-2017 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS24010 8e0dc2f5ec4258c3e784cd28e70750a8 139 SUPERFAMILY SSF102546 1 139 2.49E-44 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 LFZ55_RS24010 8e0dc2f5ec4258c3e784cd28e70750a8 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.035 T 06-07-2017 IPR023064 D-ribose pyranase GO:0016872 LFZ55_RS22025 a4a0dc1a8935a27755ea0199a0cfaeba 656 SMART SM00382 455 637 2.3E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22025 a4a0dc1a8935a27755ea0199a0cfaeba 656 SUPERFAMILY SSF52540 429 638 4.25E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22025 a4a0dc1a8935a27755ea0199a0cfaeba 656 Pfam PF00005 ABC transporter 447 591 3.3E-22 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS22025 a4a0dc1a8935a27755ea0199a0cfaeba 656 Gene3D G3DSA:3.40.50.300 431 635 6.3E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16860 a8f9889605ce5bc6eeae12263492a91c 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 5.7E-42 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LFZ55_RS16860 a8f9889605ce5bc6eeae12263492a91c 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.6E-93 T 06-07-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 SUPERFAMILY SSF161111 16 214 7.98E-60 T 06-07-2017 LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 Gene3D G3DSA:1.20.1510.10 18 213 1.9E-66 T 06-07-2017 IPR027469 Cation efflux protein transmembrane domain LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 63.749 T 06-07-2017 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 Pfam PF01545 Cation efflux family 21 213 1.0E-50 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 SUPERFAMILY SSF160240 230 291 2.22E-8 T 06-07-2017 LFZ55_RS16795 0013fbcfa536159de0349b2717dc0220 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 292 3.6E-94 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 9.3E-296 T 06-07-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Gene3D G3DSA:3.40.50.300 141 286 3.8E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Gene3D G3DSA:3.40.50.300 11 109 3.8E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Gene3D G3DSA:3.40.50.300 322 537 3.6E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Pfam PF12848 ABC transporter 230 306 3.6E-12 T 06-07-2017 IPR032781 ABC-transporter extension domain LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 SMART SM00382 348 522 6.0E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 SMART SM00382 31 236 2.4E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Pfam PF00005 ABC transporter 22 191 2.5E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 Pfam PF00005 ABC transporter 340 473 5.1E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 SUPERFAMILY SSF52540 302 526 5.75E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20400 2accecfb165d79d702dea1e6df315e76 555 SUPERFAMILY SSF52540 11 243 4.18E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 Gene3D G3DSA:3.40.50.1820 163 413 1.7E-51 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 Pfam PF11806 Domain of unknown function (DUF3327) 56 170 9.7E-28 T 06-07-2017 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 Pfam PF00756 Putative esterase 189 409 6.5E-43 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 Gene3D G3DSA:2.60.40.10 21 157 7.1E-38 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 SUPERFAMILY SSF53474 179 413 4.93E-35 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS05550 3d807e6693388b28e1e0943e9f3c2bc2 414 SUPERFAMILY SSF81296 27 165 1.11E-31 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS22575 cef081ada5e26ecd2c6c46be6304371a 245 Pfam PF06251 Capsule biosynthesis GfcC 20 244 3.9E-91 T 06-07-2017 IPR010425 Domain of unknown function DUF1017 LFZ55_RS23475 0aeba1f17691865ead2fef3029e02b24 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.1E-46 T 06-07-2017 IPR009383 Protein of unknown function DUF1040 LFZ55_RS23475 0aeba1f17691865ead2fef3029e02b24 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-44 T 06-07-2017 IPR009383 Protein of unknown function DUF1040 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PIRSF PIRSF019404 1 147 8.4E-51 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 2.4E-81 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 Pfam PF02050 Flagellar FliJ protein 19 141 7.7E-34 T 06-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LFZ55_RS09560 a814de69856da1f5478f7213726f52fa 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 2.1E-29 T 06-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 3.2E-44 T 06-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 Gene3D G3DSA:3.40.50.720 3 163 2.3E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.7E-27 T 06-07-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 SUPERFAMILY SSF48179 163 286 7.48E-32 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 Gene3D G3DSA:1.10.1040.10 164 291 2.2E-37 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 PIRSF PIRSF000103 1 295 2.0E-96 T 06-07-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 SUPERFAMILY SSF51735 3 161 3.55E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 06-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS23355 b384fdc5f3a94af2cd8a31fdddb19235 298 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 65.287 T 06-07-2017 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 LFZ55_RS07860 940bdfbc9b5d4f239d7b2a602dda94eb 242 Gene3D G3DSA:3.40.50.150 28 224 7.2E-45 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07860 940bdfbc9b5d4f239d7b2a602dda94eb 242 SUPERFAMILY SSF53335 18 224 9.27E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS07860 940bdfbc9b5d4f239d7b2a602dda94eb 242 Pfam PF13489 Methyltransferase domain 57 169 3.2E-24 T 06-07-2017 LFZ55_RS07860 940bdfbc9b5d4f239d7b2a602dda94eb 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 6.3E-91 T 06-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 LFZ55_RS07860 940bdfbc9b5d4f239d7b2a602dda94eb 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.376 T 06-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 LFZ55_RS19970 6c10d9780adfd434f96cb092c3be88c8 176 Pfam PF02525 Flavodoxin-like fold 2 167 5.0E-39 T 06-07-2017 IPR003680 Flavodoxin-like fold LFZ55_RS19970 6c10d9780adfd434f96cb092c3be88c8 176 Gene3D G3DSA:3.40.50.360 2 170 2.3E-45 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS19970 6c10d9780adfd434f96cb092c3be88c8 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 53.182 T 06-07-2017 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LFZ55_RS19970 6c10d9780adfd434f96cb092c3be88c8 176 SUPERFAMILY SSF52218 2 170 1.21E-44 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04505 a3f7abcef932a011a4345a4690c227d6 268 Gene3D G3DSA:3.40.50.720 5 263 1.7E-54 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04505 a3f7abcef932a011a4345a4690c227d6 268 Pfam PF00899 ThiF family 19 261 2.6E-38 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS04505 a3f7abcef932a011a4345a4690c227d6 268 SUPERFAMILY SSF69572 10 261 5.49E-65 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS04190 20b024ed23f297001fb8d1ad561d2c62 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 3.1E-35 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04190 20b024ed23f297001fb8d1ad561d2c62 160 SUPERFAMILY SSF141452 2 159 1.7E-41 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04190 20b024ed23f297001fb8d1ad561d2c62 160 Gene3D G3DSA:2.30.110.20 1 156 1.1E-30 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04190 20b024ed23f297001fb8d1ad561d2c62 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 159 4.5E-45 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:2.40.50.140 128 202 7.0E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF54814 206 283 3.79E-29 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF54814 284 348 3.23E-15 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 347 5.8E-130 T 06-07-2017 IPR010213 Transcription termination factor NusA GO:0003723 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:3.30.1480.10 1 124 1.8E-46 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF47794 360 419 4.4E-17 T 06-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF47794 434 497 7.06E-18 T 06-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:3.30.300.20 283 351 5.4E-26 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF50249 132 204 1.9E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 445 494 4.3E-19 T 06-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 370 419 4.0E-21 T 06-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Pfam PF14520 Helix-hairpin-helix domain 437 491 1.1E-8 T 06-07-2017 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Pfam PF13184 NusA-like KH domain 235 302 2.1E-27 T 06-07-2017 IPR025249 KH domain, NusA-like GO:0003723 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:1.10.150.20 433 498 6.1E-26 T 06-07-2017 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:1.10.150.20 362 419 7.6E-23 T 06-07-2017 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SMART SM00316 133 205 1.9E-5 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Pfam PF08529 NusA N-terminal domain 4 123 4.1E-37 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 29.043 T 06-07-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 SUPERFAMILY SSF69705 1 126 2.22E-41 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LFZ55_RS02785 a289105334d90e73fc94cbb668f47c5c 500 Gene3D G3DSA:3.30.300.20 204 282 3.4E-34 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS10895 009f4142af1514e399683d715006bb99 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.9E-118 T 06-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS10895 009f4142af1514e399683d715006bb99 284 Pfam PF00793 DAHP synthetase I family 10 274 1.2E-67 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS10895 009f4142af1514e399683d715006bb99 284 SUPERFAMILY SSF51569 3 277 5.4E-104 T 06-07-2017 LFZ55_RS10895 009f4142af1514e399683d715006bb99 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.522 T 06-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 LFZ55_RS10895 009f4142af1514e399683d715006bb99 284 Gene3D G3DSA:3.20.20.70 18 281 5.5E-107 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 6.9E-37 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 Gene3D G3DSA:1.10.287.40 1 104 3.2E-28 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 SUPERFAMILY SSF46589 1 112 8.37E-32 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 Gene3D G3DSA:3.30.930.10 105 427 7.8E-142 T 06-07-2017 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PIRSF PIRSF001529 1 430 3.5E-185 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 SUPERFAMILY SSF55681 116 424 8.57E-100 T 06-07-2017 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.0E-33 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.0E-33 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.0E-33 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.0E-33 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.0E-33 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.0E-33 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.63 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS15815 4aadfb24a988c10f6835b6e9a9e55628 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 4.3E-184 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LFZ55_RS20180 abea3ed0db143f366a802c75cac88405 281 Pfam PF13462 Thioredoxin 100 276 6.8E-12 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS20180 abea3ed0db143f366a802c75cac88405 281 Gene3D G3DSA:3.40.30.10 95 279 4.4E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS20180 abea3ed0db143f366a802c75cac88405 281 SUPERFAMILY SSF52833 96 277 1.16E-26 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS15060 9ead471a82d0e305c1930493e2731bd7 113 ProDom PD030752 CHAPERONE VIRULENCE SIGE IPGE PLASMID PROTEIN: SHIGELLA 3D-STRUCTURE SEQUENCING DIRECT 1 113 1.0E-56 T 06-07-2017 IPR013095 Type III secretion system chaperone LFZ55_RS15060 9ead471a82d0e305c1930493e2731bd7 113 Gene3D G3DSA:3.30.1460.10 1 113 1.1E-59 T 06-07-2017 LFZ55_RS15060 9ead471a82d0e305c1930493e2731bd7 113 SUPERFAMILY SSF69635 1 112 1.78E-49 T 06-07-2017 LFZ55_RS15060 9ead471a82d0e305c1930493e2731bd7 113 Pfam PF07824 Type III secretion chaperone domain 3 112 6.8E-50 T 06-07-2017 IPR013095 Type III secretion system chaperone LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 Pfam PF01026 TatD related DNase 6 255 4.2E-70 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 PIRSF PIRSF005902 2 257 1.8E-72 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 SUPERFAMILY SSF51556 5 257 3.33E-79 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS20465 cd5ae51a01fdaf64a272a863481b95d5 257 Gene3D G3DSA:3.20.20.140 3 257 2.9E-81 T 06-07-2017 LFZ55_RS19300 ed37ab2b8cc4d398b0b3b48331f77144 185 Gene3D G3DSA:1.10.132.20 67 184 9.3E-44 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LFZ55_RS19300 ed37ab2b8cc4d398b0b3b48331f77144 185 Pfam PF01765 Ribosome recycling factor 20 183 1.9E-62 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LFZ55_RS19300 ed37ab2b8cc4d398b0b3b48331f77144 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 4.6E-80 T 06-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 LFZ55_RS19300 ed37ab2b8cc4d398b0b3b48331f77144 185 SUPERFAMILY SSF55194 2 184 4.84E-71 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LFZ55_RS19300 ed37ab2b8cc4d398b0b3b48331f77144 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.277 T 06-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 Gene3D G3DSA:2.40.50.100 53 78 9.7E-11 T 06-07-2017 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 Gene3D G3DSA:2.40.50.100 264 300 9.7E-11 T 06-07-2017 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 281 302 1.1E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 395 415 1.1E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 56 76 1.1E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 380 395 1.1E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 10 415 4.6E-67 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 Pfam PF13437 HlyD family secretion protein 267 383 9.6E-19 T 06-07-2017 LFZ55_RS22385 7d0209492978d9e9aedc53d4941a49ee 425 Pfam PF13533 Biotin-lipoyl like 48 85 8.3E-6 T 06-07-2017 LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 Gene3D G3DSA:3.40.50.920 190 317 2.3E-43 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 Gene3D G3DSA:3.40.50.970 10 189 1.4E-36 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 Pfam PF02779 Transketolase, pyrimidine binding domain 13 163 8.1E-20 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 SMART SM00861 13 178 6.2E-23 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 SUPERFAMILY SSF52922 185 317 2.49E-37 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 6.8E-34 T 06-07-2017 IPR033248 Transketolase, C-terminal domain LFZ55_RS07565 f5b2697aa89943aa7549f23a60b9b259 317 SUPERFAMILY SSF52518 9 178 1.23E-36 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 1.5E-82 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 Gene3D G3DSA:1.10.620.20 7 274 7.4E-90 T 06-07-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 2.7E-142 T 06-07-2017 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 06-07-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 SUPERFAMILY SSF47240 6 319 2.52E-102 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS05375 4ad2bbb81455f98afbb09e4524414e24 319 PIRSF PIRSF000355 2 316 4.8E-78 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 235 29.364 T 06-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 132 231 4.0E-30 T 06-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 Gene3D G3DSA:2.160.20.70 117 234 3.8E-37 T 06-07-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 234 1.6E-69 T 06-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 1.4E-36 T 06-07-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 LFZ55_RS10470 85ea16d02afd2ddd018fb57757cad212 235 SUPERFAMILY SSF63848 129 234 1.23E-30 T 06-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 Gene3D G3DSA:3.30.930.10 109 462 1.6E-111 T 06-07-2017 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 Gene3D G3DSA:2.40.50.140 16 103 2.3E-17 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.541 T 06-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.1E-81 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 SUPERFAMILY SSF55681 97 464 2.79E-96 T 06-07-2017 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 7.2E-13 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 SUPERFAMILY SSF50249 16 101 1.97E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15625 c2b9a062c055afe81d9b3c3976c1e648 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.0E-211 T 06-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 Gene3D G3DSA:2.40.160.20 25 174 9.2E-38 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 SUPERFAMILY SSF56925 25 174 6.8E-26 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 7.7E-18 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 1.1E-13 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 162 173 1.1E-13 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS18675 2239a87cd95e4d3070a3481db10cf3c9 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 135 156 1.1E-13 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 06-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 06-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 97.891 T 06-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 SUPERFAMILY SSF52540 1 343 6.76E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 7.8E-139 T 06-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 Gene3D G3DSA:3.40.50.300 230 342 1.2E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 Gene3D G3DSA:3.40.50.300 1 171 1.2E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00015 e6c60a227b5aadb2ba9c6d5184621c0b 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 5.4E-41 T 06-07-2017 IPR003395 RecF/RecN/SMC, N-terminal LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 Pfam PF07690 Major Facilitator Superfamily 35 396 3.4E-48 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 SUPERFAMILY SSF103473 17 437 9.29E-77 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 PIRSF PIRSF002808 6 442 7.5E-151 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 06-07-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 9.3E-155 T 06-07-2017 LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 Gene3D G3DSA:1.20.1250.20 243 437 1.2E-36 T 06-07-2017 LFZ55_RS00295 91326b3f90424f78186dc319eccd096d 442 Gene3D G3DSA:1.20.1250.20 21 210 5.7E-48 T 06-07-2017 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 06-07-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Gene3D G3DSA:3.30.499.10 369 574 4.3E-62 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Gene3D G3DSA:3.30.499.10 22 249 5.1E-79 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 SUPERFAMILY SSF52016 630 890 3.34E-90 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 SUPERFAMILY SSF53732 10 626 1.96E-225 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 1.2E-181 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Pfam PF00694 Aconitase C-terminal domain 691 818 8.5E-51 T 06-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Gene3D G3DSA:3.40.1060.10 250 367 2.9E-36 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 Gene3D G3DSA:3.20.19.10 636 889 5.2E-83 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 217 232 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 431 442 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 279 292 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 293 306 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 493 506 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 203 216 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 170 178 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 372 386 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS11225 2eabd0598c0ca2322e4582ae69f37850 891 PRINTS PR00415 Aconitase family signature 146 159 2.4E-42 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS18635 1eff125b09e7cb363a8b1ce80a466fbb 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 436 4.2E-165 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LFZ55_RS18635 1eff125b09e7cb363a8b1ce80a466fbb 467 PIRSF PIRSF006446 1 457 2.4E-219 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LFZ55_RS15755 62f7fb6d04f331acde447781413f0c61 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.2E-79 T 06-07-2017 IPR003776 YcaO-like domain LFZ55_RS15755 62f7fb6d04f331acde447781413f0c61 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 7.4E-169 T 06-07-2017 IPR003776 YcaO-like domain LFZ55_RS07795 44f631cafc85d2e7cc44662e27889d32 215 SUPERFAMILY SSF56925 91 212 4.24E-9 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS07795 44f631cafc85d2e7cc44662e27889d32 215 Gene3D G3DSA:2.40.160.10 48 211 5.2E-8 T 06-07-2017 IPR023614 Porin domain LFZ55_RS07795 44f631cafc85d2e7cc44662e27889d32 215 Pfam PF07437 YfaZ precursor 36 215 5.3E-82 T 06-07-2017 IPR009998 YfaZ LFZ55_RS21550 82f6166680435b4fe127652244e64554 469 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS21550 82f6166680435b4fe127652244e64554 469 Pfam PF00324 Amino acid permease 27 464 2.4E-122 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS21550 82f6166680435b4fe127652244e64554 469 PIRSF PIRSF006060 1 468 5.4E-69 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS20270 d3f29ef7e257a15d2fe0de79d4e44376 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 43.112 T 06-07-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI LFZ55_RS20270 d3f29ef7e257a15d2fe0de79d4e44376 134 Pfam PF10807 Protein of unknown function (DUF2541) 4 132 1.2E-69 T 06-07-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI LFZ55_RS20270 d3f29ef7e257a15d2fe0de79d4e44376 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 20 134 1.0E-61 T 06-07-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI LFZ55_RS14655 c4180f60c794db317750d1b83956eb13 1015 Pfam PF06761 Intracellular multiplication and human macrophage-killing 300 617 2.7E-71 T 06-07-2017 IPR009612 ImcF-related LFZ55_RS14655 c4180f60c794db317750d1b83956eb13 1015 Pfam PF06744 Type VI secretion protein IcmF C-terminal 745 943 5.3E-50 T 06-07-2017 IPR010623 Type VI secretion system IcmF, C-terminal LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 Gene3D G3DSA:3.40.309.10 241 427 2.6E-65 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 SUPERFAMILY SSF53720 3 455 2.49E-144 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 Gene3D G3DSA:3.40.605.10 3 240 7.2E-68 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 Pfam PF00171 Aldehyde dehydrogenase family 3 452 2.6E-138 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS20640 8c8f7948180d81e5435abb80c1c3a806 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.3E-32 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 SUPERFAMILY SSF159127 1 86 6.15E-28 T 06-07-2017 LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.5E-22 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 2.5E-22 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 2.5E-22 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.5E-22 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 Pfam PF01455 HupF/HypC family 1 71 1.2E-25 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS05130 0765e41e22d28bceff3bb63bd81fc2d5 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 06-07-2017 IPR019812 Hydrogenase assembly chaperone, conserved site LFZ55_RS15830 0096738f9151e75464deca40b896f566 203 SUPERFAMILY SSF89392 22 202 2.12E-57 T 06-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX LFZ55_RS15830 0096738f9151e75464deca40b896f566 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 8.1E-59 T 06-07-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LFZ55_RS15830 0096738f9151e75464deca40b896f566 203 Gene3D G3DSA:2.50.20.10 23 203 1.4E-60 T 06-07-2017 LFZ55_RS15830 0096738f9151e75464deca40b896f566 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 1.4E-119 T 06-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LFZ55_RS15830 0096738f9151e75464deca40b896f566 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 201 32.824 T 06-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LFZ55_RS17695 bef878f21d614e62178f2fa55ad3bcd8 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 98 1.9E-32 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS17695 bef878f21d614e62178f2fa55ad3bcd8 103 SUPERFAMILY SSF46973 4 99 1.27E-32 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS17695 bef878f21d614e62178f2fa55ad3bcd8 103 Gene3D G3DSA:1.20.58.80 4 101 3.8E-36 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS17695 bef878f21d614e62178f2fa55ad3bcd8 103 PIRSF PIRSF000699 2 103 1.1E-31 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Pfam PF00668 Condensation domain 576 865 7.2E-35 T 06-07-2017 IPR001242 Condensation domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Pfam PF00501 AMP-binding enzyme 1 380 6.4E-56 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:3.40.50.980 132 279 8.3E-28 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Pfam PF13193 AMP-binding enzyme C-terminal domain 389 464 2.3E-5 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1041 1395 1.1E-64 T 06-07-2017 IPR010080 Thioester reductase-like domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:3.40.50.980 1 131 3.4E-18 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:3.40.50.720 1041 1325 2.3E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:3.30.300.30 374 473 7.2E-23 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Pfam PF00550 Phosphopantetheine attachment site 511 557 1.3E-5 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Pfam PF07993 Male sterility protein 1043 1280 1.8E-46 T 06-07-2017 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 SUPERFAMILY SSF52777 769 998 1.11E-18 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 SUPERFAMILY SSF51735 1041 1313 1.86E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:2.30.38.10 289 369 8.4E-16 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 Gene3D G3DSA:1.10.1200.10 494 563 1.6E-11 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 SUPERFAMILY SSF52777 577 744 2.67E-26 T 06-07-2017 LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 SUPERFAMILY SSF47336 492 557 1.2E-9 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 ProSitePatterns PS00012 Phosphopantetheine attachment site. 518 533 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site LFZ55_RS14805 376cb581a338cd0af30adb6124e3d4c5 1401 SUPERFAMILY SSF56801 1 501 7.59E-96 T 06-07-2017 LFZ55_RS18355 4f96d4c79cee3effc0301d3f84923ab7 139 Gene3D G3DSA:1.10.940.10 3 135 1.3E-44 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS18355 4f96d4c79cee3effc0301d3f84923ab7 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 4.0E-45 T 06-07-2017 IPR011605 NusB antitermination factor GO:0006353 LFZ55_RS18355 4f96d4c79cee3effc0301d3f84923ab7 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.431 T 06-07-2017 IPR011605 NusB antitermination factor GO:0006353 LFZ55_RS18355 4f96d4c79cee3effc0301d3f84923ab7 139 Pfam PF01029 NusB family 7 131 8.4E-35 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS18355 4f96d4c79cee3effc0301d3f84923ab7 139 SUPERFAMILY SSF48013 3 134 9.03E-42 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS24975 0664c53bd41b263e60b259f0eacaaa28 156 Gene3D G3DSA:1.10.530.10 21 124 6.0E-16 T 06-07-2017 LFZ55_RS24975 0664c53bd41b263e60b259f0eacaaa28 156 Pfam PF01464 Transglycosylase SLT domain 22 124 1.5E-19 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS24975 0664c53bd41b263e60b259f0eacaaa28 156 SUPERFAMILY SSF53955 18 146 3.94E-26 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS04270 261ad53f0291cbfb0b372edb9346d730 169 Pfam PF07180 Protein of unknown function (DUF1401) 20 164 1.0E-84 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS04270 261ad53f0291cbfb0b372edb9346d730 169 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 37 100 4.0E-4 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 Pfam PF13392 HNH endonuclease 53 96 4.0E-10 T 06-07-2017 IPR003615 HNH nuclease LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 Pfam PF00847 AP2 domain 107 156 9.2E-9 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 SMART SM00380 108 163 5.1E-4 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 SUPERFAMILY SSF54060 4 103 2.0E-20 T 06-07-2017 LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 SUPERFAMILY SSF54171 107 160 2.22E-13 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 LFZ55_RS06585 75440c0fe1f5b7e73063452220614ba2 164 Gene3D G3DSA:3.30.730.10 109 157 4.5E-8 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 Gene3D G3DSA:1.10.1060.10 6 84 3.9E-16 T 06-07-2017 LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 Pfam PF02754 Cysteine-rich domain 163 249 2.1E-15 T 06-07-2017 IPR004017 Cysteine-rich domain LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 Pfam PF02754 Cysteine-rich domain 293 376 2.4E-14 T 06-07-2017 IPR004017 Cysteine-rich domain LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 SUPERFAMILY SSF46548 6 82 1.12E-16 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 3.5E-10 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS07810 fee38f3a0748680e5b260d5b5cb89401 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 4.1E-227 T 06-07-2017 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 LFZ55_RS13860 df11ee669ccd0c8915bab303594e13c7 60 Gene3D G3DSA:3.30.160.220 1 60 3.2E-35 T 06-07-2017 IPR015051 Protein YoaG LFZ55_RS13860 df11ee669ccd0c8915bab303594e13c7 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 3.1E-31 T 06-07-2017 IPR015051 Protein YoaG LFZ55_RS13860 df11ee669ccd0c8915bab303594e13c7 60 SUPERFAMILY SSF103063 1 60 8.24E-31 T 06-07-2017 IPR015051 Protein YoaG LFZ55_RS17120 eef68bc9bd2edb85cc7db598aae028c6 256 SUPERFAMILY SSF53474 12 252 5.93E-48 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17120 eef68bc9bd2edb85cc7db598aae028c6 256 Gene3D G3DSA:3.40.50.1820 8 252 1.3E-46 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17120 eef68bc9bd2edb85cc7db598aae028c6 256 Pfam PF12697 Alpha/beta hydrolase family 19 246 5.9E-18 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Pfam PF01266 FAD dependent oxidoreductase 2 396 3.1E-70 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 SUPERFAMILY SSF54373 269 359 6.28E-17 T 06-07-2017 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 SUPERFAMILY SSF51905 107 271 2.33E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 SUPERFAMILY SSF51905 1 54 2.33E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 SUPERFAMILY SSF51905 359 417 2.33E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 53.987 T 06-07-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.50.50.60 1 55 6.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.50.50.60 108 122 6.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.50.50.60 359 418 6.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.50.50.60 190 269 6.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.30.9.10 135 189 8.6E-15 T 06-07-2017 LFZ55_RS10525 dde3ab1b0d0dd8ef05a15e9134cb21da 432 Gene3D G3DSA:3.30.9.10 270 358 8.6E-15 T 06-07-2017 LFZ55_RS06825 bf9e37665ecb3692bf487e6561950b3c 118 SUPERFAMILY SSF52833 1 115 5.03E-33 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS06825 bf9e37665ecb3692bf487e6561950b3c 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.9E-35 T 06-07-2017 IPR006504 Transcriptional regulator Spx/MgsR LFZ55_RS06825 bf9e37665ecb3692bf487e6561950b3c 118 Pfam PF03960 ArsC family 5 114 5.5E-17 T 06-07-2017 IPR006660 Arsenate reductase-like LFZ55_RS06825 bf9e37665ecb3692bf487e6561950b3c 118 Gene3D G3DSA:3.40.30.10 1 115 1.7E-42 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 SUPERFAMILY SSF55174 1 55 4.56E-12 T 06-07-2017 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 Pfam PF01479 S4 domain 1 44 1.8E-8 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 3.9E-60 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 2.0E-17 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 SMART SM00363 1 60 5.8E-9 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 Gene3D G3DSA:3.10.290.10 1 64 2.3E-21 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS08110 97b8c33c32c844211d416dc96afcbcb0 231 SUPERFAMILY SSF55120 61 227 2.08E-46 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 SUPERFAMILY SSF51735 29 209 7.18E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 SUPERFAMILY SSF48179 210 370 3.23E-41 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Gene3D G3DSA:1.10.1040.10 361 481 1.2E-15 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 5.3E-28 T 06-07-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 3.6E-21 T 06-07-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-58 T 06-07-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Gene3D G3DSA:3.40.50.720 1 201 1.2E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 SUPERFAMILY SSF48179 349 484 7.14E-40 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.6E-136 T 06-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 LFZ55_RS23890 c064c488d4223d05076f32b24f147d3d 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 38.651 T 06-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 LFZ55_RS15935 b510b15832b4b3f2cd73619c4a16c250 552 SUPERFAMILY SSF52540 1 332 2.92E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15935 b510b15832b4b3f2cd73619c4a16c250 552 Gene3D G3DSA:3.40.50.300 1 129 3.2E-19 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15935 b510b15832b4b3f2cd73619c4a16c250 552 Gene3D G3DSA:3.40.50.300 165 343 3.2E-19 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15935 b510b15832b4b3f2cd73619c4a16c250 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.5E-152 T 06-07-2017 IPR022602 Protein of unknown function DUF2813 LFZ55_RS13535 3666c1cb9d8de3df61e1e8acd3553727 319 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 55 317 9.7E-38 T 06-07-2017 IPR018707 Protein of unknown function DUF2219 LFZ55_RS13535 3666c1cb9d8de3df61e1e8acd3553727 319 Gene3D G3DSA:2.40.128.140 26 319 2.3E-64 T 06-07-2017 LFZ55_RS18130 1039bf1f7a8645fd358600d89f3a9206 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 112 1.2E-25 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS18130 1039bf1f7a8645fd358600d89f3a9206 129 SUPERFAMILY SSF46767 31 113 1.06E-25 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS18130 1039bf1f7a8645fd358600d89f3a9206 129 Gene3D G3DSA:1.10.10.10 32 114 7.7E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18130 1039bf1f7a8645fd358600d89f3a9206 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 33 101 2.2E-14 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LFZ55_RS05600 7457c698a1ad1757c5055369c347d8fd 110 SUPERFAMILY SSF49401 2 109 6.46E-9 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS05600 7457c698a1ad1757c5055369c347d8fd 110 Gene3D G3DSA:2.60.40.1090 2 110 1.2E-10 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 Gene3D G3DSA:1.10.150.170 112 215 1.7E-38 T 06-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.216 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 PIRSF PIRSF004486 1 312 1.1E-103 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 SUPERFAMILY SSF53335 7 113 3.96E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 SUPERFAMILY SSF53335 213 310 3.96E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 SUPERFAMILY SSF81799 114 213 1.96E-35 T 06-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 Pfam PF01795 MraW methylase family 4 310 1.8E-122 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 Gene3D G3DSA:3.40.50.150 7 110 3.4E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 Gene3D G3DSA:3.40.50.150 216 312 3.4E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19780 e7e2af3643a544702e34c33b348c2881 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.7E-134 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS20480 7af4fa32d7e8d411ebab953f54d9b057 205 SMART SM00749 143 205 9.1E-9 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria LFZ55_RS20480 7af4fa32d7e8d411ebab953f54d9b057 205 SMART SM00749 64 127 4.1E-13 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria LFZ55_RS20480 7af4fa32d7e8d411ebab953f54d9b057 205 Pfam PF04972 BON domain 59 126 1.9E-20 T 06-07-2017 IPR007055 BON domain LFZ55_RS20480 7af4fa32d7e8d411ebab953f54d9b057 205 Pfam PF04972 BON domain 139 204 1.3E-19 T 06-07-2017 IPR007055 BON domain LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 Gene3D G3DSA:3.40.50.150 23 247 3.6E-59 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 2.5E-112 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 SUPERFAMILY SSF53335 18 249 8.36E-52 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 06-07-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 06-07-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 3.1E-89 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 LFZ55_RS23590 b84678efb420162b6218ead50914390d 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.138 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 87 111 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 267 283 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 242 260 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 183 205 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 147 176 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 408 424 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PRINTS PR00072 Malic enzyme signature 298 314 6.7E-74 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.072 T 06-07-2017 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.1E-102 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 SUPERFAMILY SSF51735 271 562 5.32E-94 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 Gene3D G3DSA:3.40.50.720 269 562 5.1E-108 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 PIRSF PIRSF000106 1 563 8.0E-224 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 06-07-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.2E-79 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 SUPERFAMILY SSF53223 8 270 9.35E-110 T 06-07-2017 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 SMART SM00919 271 531 3.9E-128 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 SMART SM01274 81 261 9.4E-108 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS12180 a1009b9c872fdae54d3d8804b7999995 565 Gene3D G3DSA:3.40.50.10380 17 268 4.2E-115 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 Gene3D G3DSA:3.40.50.2300 63 152 6.8E-29 T 06-07-2017 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 06-07-2017 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 SMART SM00354 1 73 7.4E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 SUPERFAMILY SSF53822 60 314 2.55E-42 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.5E-155 T 06-07-2017 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 Gene3D G3DSA:3.40.50.2300 156 329 1.8E-36 T 06-07-2017 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS19795 2d530ade99e395404298a219c1328e0b 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 7.1E-14 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.0E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.0E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.0E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.0E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF50677 191 365 9.55E-57 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:1.10.287.380 879 933 3.8E-5 T 06-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 5.6E-227 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:3.40.50.620 364 571 5.6E-141 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:3.40.50.620 609 630 5.6E-141 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:3.40.50.620 3 193 5.6E-141 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 1.6E-17 T 06-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF47323 642 899 2.99E-70 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.163 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF46589 884 947 1.36E-16 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 1.3E-41 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:1.10.730.10 631 816 4.8E-63 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 Gene3D G3DSA:3.90.740.10 194 360 1.7E-47 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF52374 364 571 3.25E-136 T 06-07-2017 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF52374 1 192 3.25E-136 T 06-07-2017 LFZ55_RS21230 f598d511a26eea100c51edc0dec5c7c8 951 SUPERFAMILY SSF52374 609 641 3.25E-136 T 06-07-2017 LFZ55_RS19555 a6869eb4a07bb7e5c838aaa5f473be65 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.7E-42 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 LFZ55_RS19555 a6869eb4a07bb7e5c838aaa5f473be65 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.365 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 LFZ55_RS19555 a6869eb4a07bb7e5c838aaa5f473be65 120 PIRSF PIRSF006287 1 120 1.0E-48 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 LFZ55_RS19555 a6869eb4a07bb7e5c838aaa5f473be65 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-61 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 SUPERFAMILY SSF74650 23 393 5.02E-167 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 SUPERFAMILY SSF81296 397 510 4.06E-34 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 1.0E-200 T 06-07-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 Gene3D G3DSA:2.70.98.10 22 395 1.5E-177 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 63.558 T 06-07-2017 IPR023704 Glucan biosynthesis protein G LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 Gene3D G3DSA:2.60.40.10 399 510 8.2E-43 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS14525 ad0430fe0044d7a7839f1223e650d6ef 511 PIRSF PIRSF006281 1 511 2.9E-242 T 06-07-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 PIRSF PIRSF029256 1 154 5.8E-71 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.3E-74 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 Gene3D G3DSA:3.40.1280.10 1 153 5.3E-71 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.1E-33 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.283 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS00755 1a38ad8e6209e548a14f3601b9cfd089 157 SUPERFAMILY SSF75217 1 152 4.71E-45 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 SUPERFAMILY SSF53223 1 122 3.26E-40 T 06-07-2017 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.663 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 06-07-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.2E-39 T 06-07-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 Gene3D G3DSA:3.40.50.720 140 264 4.5E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 Gene3D G3DSA:3.40.192.10 7 139 3.4E-51 T 06-07-2017 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.8E-88 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 SUPERFAMILY SSF51735 123 282 1.98E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 4.2E-68 T 06-07-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS17840 090dedcc79a2ae5f4da0c0b76d63e59a 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 06-07-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-45 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.2E-22 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 Gene3D G3DSA:3.30.110.60 1 94 1.4E-34 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 SMART SM01103 3 86 2.2E-41 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 9.3E-43 T 06-07-2017 IPR017924 RNA-binding protein YhbY GO:0003723 LFZ55_RS02730 04c926d91a49e73b2c3046fcf4af298d 97 SUPERFAMILY SSF75471 1 95 3.27E-31 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Pfam PF00012 Hsp70 protein 332 423 1.9E-5 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Pfam PF00012 Hsp70 protein 3 227 1.6E-15 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 SUPERFAMILY SSF53067 208 276 3.84E-30 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 SUPERFAMILY SSF53067 328 447 3.84E-30 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Gene3D G3DSA:3.30.420.40 85 217 2.0E-29 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Gene3D G3DSA:3.30.420.40 2 43 2.0E-29 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Gene3D G3DSA:3.30.420.40 374 433 3.2E-14 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 Gene3D G3DSA:3.30.420.40 218 241 3.2E-14 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 SUPERFAMILY SSF53067 85 205 3.56E-27 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 SUPERFAMILY SSF53067 2 44 3.56E-27 T 06-07-2017 LFZ55_RS08625 df783d806a4691cbc5237ffc7fcf5c16 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 31.518 T 06-07-2017 IPR008314 Uncharacterised conserved protein UCP029143 LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 PIRSF PIRSF029143 1 103 1.0E-51 T 06-07-2017 IPR008314 Uncharacterised conserved protein UCP029143 LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 Gene3D G3DSA:2.30.130.30 1 102 7.8E-49 T 06-07-2017 LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 SUPERFAMILY SSF88697 1 102 1.99E-33 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 SMART SM01022 6 102 1.8E-25 T 06-07-2017 IPR007374 ASCH domain LFZ55_RS04110 3aad4ecf1dfec1389c59c9f4983ca140 103 Pfam PF04266 ASCH domain 6 94 1.6E-15 T 06-07-2017 IPR007374 ASCH domain LFZ55_RS23530 210af3006acbe3d736b3cf6905fd80db 443 Pfam PF00557 Metallopeptidase family M24 168 430 7.0E-44 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS23530 210af3006acbe3d736b3cf6905fd80db 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.931 T 06-07-2017 IPR022846 Xaa-Pro dipeptidase GO:0016795 LFZ55_RS23530 210af3006acbe3d736b3cf6905fd80db 443 Gene3D G3DSA:3.90.230.10 161 439 6.4E-54 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS23530 210af3006acbe3d736b3cf6905fd80db 443 SUPERFAMILY SSF55920 163 438 5.89E-55 T 06-07-2017 IPR000994 Peptidase M24, structural domain LFZ55_RS23530 210af3006acbe3d736b3cf6905fd80db 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 06-07-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LFZ55_RS19465 90a574848ef5e5142351a0827a790275 296 Pfam PF04754 Putative transposase, YhgA-like 7 201 2.0E-72 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS19465 90a574848ef5e5142351a0827a790275 296 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 292 8.7E-55 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 Pfam PF13740 ACT domain 29 104 1.1E-25 T 06-07-2017 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 PIRSF PIRSF028103 27 202 8.3E-68 T 06-07-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 SUPERFAMILY SSF55021 28 110 9.99E-17 T 06-07-2017 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 Gene3D G3DSA:3.30.70.260 113 210 4.7E-47 T 06-07-2017 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 Gene3D G3DSA:3.30.70.260 28 106 2.9E-32 T 06-07-2017 LFZ55_RS06785 236908113866b4d94b0721147fd1dabd 212 SUPERFAMILY SSF55021 114 201 6.66E-18 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 SUPERFAMILY SSF53706 1 639 4.45E-230 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Gene3D G3DSA:3.40.228.10 152 261 2.2E-71 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Gene3D G3DSA:3.40.228.10 1 108 2.2E-71 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 SUPERFAMILY SSF50692 618 648 4.14E-43 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 SUPERFAMILY SSF50692 675 804 4.14E-43 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Pfam PF00384 Molybdopterin oxidoreductase 2 377 1.8E-21 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Gene3D G3DSA:2.40.40.20 606 804 6.1E-49 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 1.9E-17 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 Gene3D G3DSA:3.40.50.740 320 470 1.9E-58 T 06-07-2017 LFZ55_RS23280 6e222651b510e4a205bff203fcfcf7bc 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 06-07-2017 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 Gene3D G3DSA:4.10.520.10 1 90 5.1E-37 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 SUPERFAMILY SSF47729 1 90 1.35E-32 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 SMART SM00411 1 90 2.3E-43 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS22730 1bb50092fec0dda32954ed0fac5a61aa 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.2E-33 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 Gene3D G3DSA:3.40.50.300 188 384 8.6E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 8.2E-235 T 06-07-2017 IPR004482 Mg chelatase-related protein LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 SUPERFAMILY SSF54211 11 169 5.31E-28 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.3E-44 T 06-07-2017 LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 SUPERFAMILY SSF52540 189 502 1.92E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 SMART SM00382 209 389 2.4E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 2.4E-29 T 06-07-2017 IPR025158 Mg chelatase-related protein, C-terminal domain LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 Gene3D G3DSA:3.30.230.10 5 161 2.6E-25 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS23930 582fdb52905d0c0e0a15e9f1f93369e6 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 7.8E-90 T 06-07-2017 IPR000523 Magnesium chelatase ChlI domain LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 SUPERFAMILY SSF52794 377 466 5.75E-22 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 SUPERFAMILY SSF55804 496 634 1.19E-40 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 1.9E-9 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 2.7E-20 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 Gene3D G3DSA:3.40.930.10 497 634 6.6E-44 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 1.3E-188 T 06-07-2017 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 3.4E-33 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS00795 732fd348c986f5fabc0491c9c0a49416 637 Gene3D G3DSA:3.40.50.10370 376 474 2.8E-42 T 06-07-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LFZ55_RS04760 717bd438f1899fa7961514a20eae9212 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 16 128 4.7E-22 T 06-07-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LFZ55_RS04760 717bd438f1899fa7961514a20eae9212 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 133 239 2.9E-30 T 06-07-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LFZ55_RS04760 717bd438f1899fa7961514a20eae9212 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 8 272 6.2E-115 T 06-07-2017 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 LFZ55_RS04760 717bd438f1899fa7961514a20eae9212 306 Pfam PF01867 CRISPR associated protein Cas1 132 228 1.0E-9 T 06-07-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LFZ55_RS04760 717bd438f1899fa7961514a20eae9212 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 299 16.909 T 06-07-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LFZ55_RS11570 dec6d3c9804a4edeb1bb359069c11d48 84 Pfam PF10749 Protein of unknown function (DUF2534) 4 83 2.2E-41 T 06-07-2017 IPR019685 Protein of unknown function DUF2534 LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 6.5E-50 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 SUPERFAMILY SSF56784 1 262 2.03E-60 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 Gene3D G3DSA:3.40.50.1000 179 264 9.7E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 Gene3D G3DSA:3.40.50.1000 1 74 9.7E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 5.2E-20 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 Gene3D G3DSA:3.30.1240.10 84 178 1.9E-33 T 06-07-2017 LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 4.0E-62 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS16405 c9f5e8d3ad55be3ea6b4365b39a24964 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 06-07-2017 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 Gene3D G3DSA:1.10.10.60 167 218 1.5E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 Pfam PF12833 Helix-turn-helix domain 186 263 4.8E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 258 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 SUPERFAMILY SSF46689 168 212 3.81E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 SUPERFAMILY SSF51215 29 150 3.92E-21 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 Gene3D G3DSA:2.60.120.280 29 151 1.2E-17 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 Pfam PF02311 AraC-like ligand binding domain 30 140 7.2E-17 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 SMART SM00342 180 262 2.3E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 SUPERFAMILY SSF46689 217 264 1.48E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS20610 a420ddf95f2e58f8d463b43aa6df9d4c 271 Gene3D G3DSA:1.10.10.60 219 264 8.1E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12990 aa1ab707620de66d1f37a9f178c319d3 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.2E-7 T 06-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 LFZ55_RS01620 c21bd467d02867bf1775ff33c393d32e 438 PIRSF PIRSF002746 1 438 5.3E-159 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS01620 c21bd467d02867bf1775ff33c393d32e 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.8E-201 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS01620 c21bd467d02867bf1775ff33c393d32e 438 Pfam PF02447 GntP family permease 1 437 1.8E-186 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 Pfam PF08774 VRR-NUC domain 873 969 8.9E-11 T 06-07-2017 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 Gene3D G3DSA:3.40.50.300 9 229 2.0E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 SUPERFAMILY SSF52540 134 245 3.29E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 SUPERFAMILY SSF52540 7 100 3.29E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 SUPERFAMILY SSF52540 49 87 5.55E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 SUPERFAMILY SSF52540 476 545 5.55E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18645 5e1a7ebe677578ff251a9d0ae67a6a97 989 Pfam PF04851 Type III restriction enzyme, res subunit 6 228 7.2E-34 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LFZ55_RS06795 ecdf93da0fb0fea3dc27826b8beefcff 344 Pfam PF06804 NlpB/DapX lipoprotein 40 342 4.8E-110 T 06-07-2017 IPR010653 NlpB/DapX lipoprotein LFZ55_RS06795 ecdf93da0fb0fea3dc27826b8beefcff 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 38.096 T 06-07-2017 IPR014524 Outer membrane protein assembly factor BamC LFZ55_RS06795 ecdf93da0fb0fea3dc27826b8beefcff 344 PIRSF PIRSF026343 9 344 1.9E-141 T 06-07-2017 IPR014524 Outer membrane protein assembly factor BamC LFZ55_RS04445 4e24ba4f22281ec30826dbd61792b474 187 PIRSF PIRSF004525 1 187 7.5E-67 T 06-07-2017 IPR016419 Prepilin peptidase-dependent protein B, predicted LFZ55_RS04445 4e24ba4f22281ec30826dbd61792b474 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 24 1.1E-5 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS06205 0e3757fbe7d181e16106989582f1ddc1 261 Pfam PF14581 SseB protein C-terminal domain 140 246 1.9E-31 T 06-07-2017 IPR027945 SseB protein, C-terminal LFZ55_RS06205 0e3757fbe7d181e16106989582f1ddc1 261 Pfam PF07179 SseB protein N-terminal domain 12 122 2.5E-24 T 06-07-2017 IPR009839 SseB protein N-terminal domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 560 576 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Pfam PF00874 PRD domain 215 298 1.4E-5 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Pfam PF00874 PRD domain 321 407 7.3E-20 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Gene3D G3DSA:1.10.1790.10 316 412 5.8E-24 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Gene3D G3DSA:1.10.1790.10 206 298 1.6E-5 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 SUPERFAMILY SSF63520 209 298 3.79E-5 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Gene3D G3DSA:1.10.10.10 110 172 1.8E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Gene3D G3DSA:1.10.10.10 24 85 2.4E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Pfam PF05043 Mga helix-turn-helix domain 110 186 7.7E-12 T 06-07-2017 IPR007737 Mga helix-turn-helix domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 530 646 6.9E-19 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Gene3D G3DSA:3.40.930.10 511 648 9.7E-26 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 ProSitePatterns PS00894 DeoR-type HTH domain signature. 27 60 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 Pfam PF08279 HTH domain 27 83 9.3E-11 T 06-07-2017 IPR013196 Helix-turn-helix, type 11 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 SUPERFAMILY SSF55804 511 648 1.31E-26 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS21355 9abf63542d7c3de12a22c68776038c63 657 SUPERFAMILY SSF63520 314 412 1.7E-22 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS23085 c8f36092bb75703b34a12fbf7892ac46 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.297 T 06-07-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 LFZ55_RS23085 c8f36092bb75703b34a12fbf7892ac46 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.8E-25 T 06-07-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 LFZ55_RS17355 7cfea440500d38352d8bc399a7e5d425 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.635 T 06-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LFZ55_RS17355 7cfea440500d38352d8bc399a7e5d425 105 SUPERFAMILY SSF81301 4 105 4.74E-37 T 06-07-2017 LFZ55_RS17355 7cfea440500d38352d8bc399a7e5d425 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.3E-28 T 06-07-2017 LFZ55_RS17355 7cfea440500d38352d8bc399a7e5d425 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 8.5E-38 T 06-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LFZ55_RS17355 7cfea440500d38352d8bc399a7e5d425 105 Gene3D G3DSA:3.30.460.10 4 105 5.9E-38 T 06-07-2017 LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 Gene3D G3DSA:3.30.70.20 126 189 4.2E-33 T 06-07-2017 LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 Gene3D G3DSA:3.30.70.20 4 74 4.2E-33 T 06-07-2017 LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0025 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 7.6E-29 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.2E-79 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 Gene3D G3DSA:3.30.70.20 75 125 4.6E-25 T 06-07-2017 LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 SUPERFAMILY SSF54862 3 193 4.6E-69 T 06-07-2017 LFZ55_RS12710 e56c6910cf53dd07350a3b4c7340b422 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.4E-18 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 SMART SM00862 156 232 3.7E-15 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 Pfam PF00072 Response regulator receiver domain 6 113 8.3E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 Gene3D G3DSA:3.40.50.2300 2 123 1.8E-35 T 06-07-2017 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 SMART SM00448 4 114 6.3E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS20345 c309dbeeec353a760a85ac406ec782f5 238 Gene3D G3DSA:1.10.10.10 135 233 1.7E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 Pfam PF03466 LysR substrate binding domain 95 301 5.8E-45 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 Gene3D G3DSA:1.10.10.10 8 94 3.8E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 SUPERFAMILY SSF46785 6 119 9.25E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 SUPERFAMILY SSF53850 96 301 2.95E-43 T 06-07-2017 LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.3E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 Gene3D G3DSA:3.40.190.10 184 269 6.5E-20 T 06-07-2017 LFZ55_RS04890 c1836a44a6aca3a4d4fe43557dc84541 310 Gene3D G3DSA:3.40.190.10 99 183 1.9E-23 T 06-07-2017 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.2E-89 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Gene3D G3DSA:1.10.340.30 22 122 2.9E-33 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.2E-19 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 4.3E-4 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 SMART SM00478 38 185 1.5E-52 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 06-07-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Gene3D G3DSA:1.10.1670.10 123 208 1.6E-36 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 06-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.345 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 SUPERFAMILY SSF48150 3 208 6.91E-73 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 SMART SM00525 186 206 1.6E-5 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.3E-7 T 06-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 LFZ55_RS12950 70493e5720e606a37df7fb417e93a572 211 PIRSF PIRSF001435 1 210 3.0E-50 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LFZ55_RS11870 b980b35dc8893504e4c96907f157fa86 400 Pfam PF01070 FMN-dependent dehydrogenase 49 391 1.2E-111 T 06-07-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 LFZ55_RS11870 b980b35dc8893504e4c96907f157fa86 400 Gene3D G3DSA:3.20.20.70 38 395 4.2E-124 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS11870 b980b35dc8893504e4c96907f157fa86 400 SUPERFAMILY SSF51395 38 390 1.05E-91 T 06-07-2017 LFZ55_RS11870 b980b35dc8893504e4c96907f157fa86 400 PIRSF PIRSF000138 18 397 1.3E-125 T 06-07-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LFZ55_RS11870 b980b35dc8893504e4c96907f157fa86 400 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 290 296 - T 06-07-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 LFZ55_RS01710 1ccf42125927a0cc378d3610ef8dda0d 710 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 06-07-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 LFZ55_RS01710 1ccf42125927a0cc378d3610ef8dda0d 710 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 06-07-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 LFZ55_RS01810 fcd870b395e5bd114a37327f45b94a6f 108 SUPERFAMILY SSF50022 1 107 1.71E-36 T 06-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LFZ55_RS01810 fcd870b395e5bd114a37327f45b94a6f 108 Gene3D G3DSA:2.102.10.10 2 107 2.9E-41 T 06-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LFZ55_RS01810 fcd870b395e5bd114a37327f45b94a6f 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 9.5E-41 T 06-07-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LFZ55_RS01810 fcd870b395e5bd114a37327f45b94a6f 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 6.3E-40 T 06-07-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 SUPERFAMILY SSF51984 1 90 6.02E-24 T 06-07-2017 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.7E-19 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Gene3D G3DSA:3.90.190.20 313 449 6.5E-36 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Gene3D G3DSA:3.40.50.720 1 90 7.2E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 SUPERFAMILY SSF53623 95 308 3.01E-47 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 SUPERFAMILY SSF53244 312 447 5.89E-36 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Pfam PF08245 Mur ligase middle domain 108 291 4.1E-17 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 9.1E-9 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.981 T 06-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 Gene3D G3DSA:3.40.1190.10 92 312 7.0E-82 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LFZ55_RS21450 19925e969f32353235e213da1e278a7f 455 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.3E-269 T 06-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 2.9E-42 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 2.9E-42 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 2.9E-42 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 2.9E-42 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.772 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 2.1E-58 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 SUPERFAMILY SSF54611 2 141 3.71E-54 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 Gene3D G3DSA:3.10.420.10 2 151 2.4E-65 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00740 2999957cf16a18af34fc027e2ff8be0b 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 4.4E-71 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 SUPERFAMILY SSF103473 4 410 1.44E-79 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 Gene3D G3DSA:1.20.1250.20 215 411 1.0E-24 T 06-07-2017 LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 Gene3D G3DSA:1.20.1250.20 5 195 1.1E-46 T 06-07-2017 LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 PIRSF PIRSF002808 1 416 4.6E-43 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 Pfam PF07690 Major Facilitator Superfamily 296 412 8.7E-10 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00045 19f91a1477fad88b28dd587ae03f8dbd 418 Pfam PF07690 Major Facilitator Superfamily 14 288 3.9E-46 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Pfam PF07732 Multicopper oxidase 53 165 8.4E-29 T 06-07-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Pfam PF00394 Multicopper oxidase 227 295 1.2E-4 T 06-07-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 SUPERFAMILY SSF49503 33 166 2.61E-30 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 ProSitePatterns PS00080 Multicopper oxidases signature 2. 519 530 - T 06-07-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 SUPERFAMILY SSF49503 392 536 5.12E-29 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Gene3D G3DSA:2.60.40.420 32 170 9.6E-34 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 SUPERFAMILY SSF49503 172 288 5.79E-36 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 SUPERFAMILY SSF49503 512 536 5.79E-36 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Pfam PF07731 Multicopper oxidase 424 536 6.9E-24 T 06-07-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Gene3D G3DSA:2.60.40.420 388 536 6.9E-31 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS19515 45c04b94c2ae4bf26dff06f4c460f907 536 Gene3D G3DSA:2.60.40.420 171 333 8.7E-33 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 Gene3D G3DSA:2.40.128.20 2 176 5.0E-61 T 06-07-2017 IPR012674 Calycin LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 2.6E-51 T 06-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 SUPERFAMILY SSF50814 15 176 9.66E-51 T 06-07-2017 IPR011038 Calycin-like LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 PIRSF PIRSF036893 1 177 3.8E-52 T 06-07-2017 IPR022271 Lipocalin, ApoD type LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 06-07-2017 IPR022272 Lipocalin family conserved site LFZ55_RS21830 33b5beecc9456b77eec747239837fb2a 177 Pfam PF08212 Lipocalin-like domain 34 174 8.1E-52 T 06-07-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain LFZ55_RS14090 650d2e3d1ddf60e05eff2698fbb94eff 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS14090 650d2e3d1ddf60e05eff2698fbb94eff 217 SUPERFAMILY SSF55120 37 216 8.32E-45 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14090 650d2e3d1ddf60e05eff2698fbb94eff 217 Pfam PF00849 RNA pseudouridylate synthase 41 186 8.4E-13 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS14090 650d2e3d1ddf60e05eff2698fbb94eff 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 216 1.0E-59 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 SUPERFAMILY SSF51726 1 353 1.52E-121 T 06-07-2017 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.301 T 06-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 Gene3D G3DSA:3.20.20.210 2 352 2.8E-157 T 06-07-2017 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 3.9E-141 T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS22745 3886edb612352db0fe8e09328ac6d1a4 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.1E-135 T 06-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 LFZ55_RS06010 26a939230411db2f5f5a2d0f93011a02 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.1E-107 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 LFZ55_RS06010 26a939230411db2f5f5a2d0f93011a02 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.0E-112 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 LFZ55_RS06010 26a939230411db2f5f5a2d0f93011a02 243 Gene3D G3DSA:3.20.20.70 3 242 1.5E-113 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06010 26a939230411db2f5f5a2d0f93011a02 243 SUPERFAMILY SSF63892 4 241 1.57E-102 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 LFZ55_RS06010 26a939230411db2f5f5a2d0f93011a02 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.663 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 LFZ55_RS00730 f63ec0a78c6352b579d430ae86abf916 143 SUPERFAMILY SSF52821 15 142 3.01E-31 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS00730 f63ec0a78c6352b579d430ae86abf916 143 Pfam PF00581 Rhodanese-like domain 43 133 5.6E-17 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS00730 f63ec0a78c6352b579d430ae86abf916 143 Gene3D G3DSA:3.40.250.10 22 142 9.0E-28 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS00730 f63ec0a78c6352b579d430ae86abf916 143 SMART SM00450 40 138 6.1E-22 T 06-07-2017 IPR001763 Rhodanese-like domain LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 352 367 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 249 270 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 387 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 282 306 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 329 1.1E-36 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 Pfam PF13533 Biotin-lipoyl like 59 92 1.7E-5 T 06-07-2017 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 Gene3D G3DSA:2.40.50.100 59 87 4.0E-12 T 06-07-2017 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 Gene3D G3DSA:2.40.50.100 234 268 4.0E-12 T 06-07-2017 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 Pfam PF13437 HlyD family secretion protein 236 337 6.0E-15 T 06-07-2017 LFZ55_RS05705 f046ae23cb56d99ea199b162888988ad 387 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 181 387 3.2E-62 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.0E-9 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.0E-9 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 3.9E-11 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 SUPERFAMILY SSF46689 3 74 1.55E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17665 80def8a89bff03d31ea43efdef0580d9 193 Gene3D G3DSA:1.10.357.10 7 190 2.7E-22 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 5.8E-52 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 4.0E-20 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 Gene3D G3DSA:3.30.1240.10 84 178 3.0E-33 T 06-07-2017 LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 Gene3D G3DSA:3.40.50.1000 179 265 6.9E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 Gene3D G3DSA:3.40.50.1000 1 74 6.9E-45 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 SUPERFAMILY SSF56784 1 263 2.31E-61 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 3.2E-56 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS16315 9f71079ed1e3d3217850478ad8072ac7 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 06-07-2017 LFZ55_RS05545 4a5e070006807c6fa6a13976e72e9e33 311 Pfam PF00756 Putative esterase 59 295 1.9E-8 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 LFZ55_RS05545 4a5e070006807c6fa6a13976e72e9e33 311 SUPERFAMILY SSF53474 38 297 1.35E-53 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS05545 4a5e070006807c6fa6a13976e72e9e33 311 Gene3D G3DSA:3.40.50.1820 49 300 1.5E-65 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS16645 99b88b3ec4df74dde9363d3b93968199 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 4.1E-38 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS16645 99b88b3ec4df74dde9363d3b93968199 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 4.0E-56 T 06-07-2017 IPR005247 YbhB/YbcL LFZ55_RS16645 99b88b3ec4df74dde9363d3b93968199 158 SUPERFAMILY SSF49777 1 157 1.96E-51 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS16645 99b88b3ec4df74dde9363d3b93968199 158 Gene3D G3DSA:3.90.280.10 1 158 1.7E-57 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS12030 54550a1b88ed89c464e458fcf801f882 714 Pfam PF10139 Putative bacterial virulence factor 547 709 1.1E-25 T 06-07-2017 IPR017030 Virulence effector, SrfC LFZ55_RS12030 54550a1b88ed89c464e458fcf801f882 714 Pfam PF10139 Putative bacterial virulence factor 12 417 1.7E-61 T 06-07-2017 IPR017030 Virulence effector, SrfC LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.7E-5 T 06-07-2017 IPR013105 Tetratricopeptide repeat 2 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 3.0E-117 T 06-07-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 Gene3D G3DSA:1.25.40.10 265 296 1.9E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 Gene3D G3DSA:1.25.40.10 83 203 1.9E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 Gene3D G3DSA:1.25.40.10 328 382 1.9E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 SUPERFAMILY SSF48452 311 364 3.68E-12 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 SUPERFAMILY SSF48452 86 216 3.68E-12 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23745 27c26004013b3effb54d9d8526115e49 398 Pfam PF07219 HemY protein N-terminus 26 132 2.9E-36 T 06-07-2017 IPR010817 HemY, N-terminal LFZ55_RS20050 568862c6295ef48f1c2a08247b183eea 131 Pfam PF07180 Protein of unknown function (DUF1401) 3 65 1.4E-7 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS20050 568862c6295ef48f1c2a08247b183eea 131 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 131 3.0E-54 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS20050 568862c6295ef48f1c2a08247b183eea 131 Gene3D G3DSA:1.10.10.10 24 63 9.7E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08360 8f667d53d05bd0ae94e536b43d5d1fe6 231 Pfam PF04172 LrgB-like family 12 224 5.8E-78 T 06-07-2017 IPR007300 CidB/LrgB family LFZ55_RS08360 8f667d53d05bd0ae94e536b43d5d1fe6 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 6.8E-105 T 06-07-2017 IPR005261 Conserved hypothetical protein CHP00659 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 PRINTS PR00342 Rhesus blood group protein signature 126 142 2.2E-5 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 PRINTS PR00342 Rhesus blood group protein signature 252 274 2.2E-5 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 PRINTS PR00342 Rhesus blood group protein signature 221 239 2.2E-5 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 PRINTS PR00342 Rhesus blood group protein signature 307 325 2.2E-5 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 2.7E-137 T 06-07-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 Pfam PF00909 Ammonium Transporter Family 33 426 3.1E-129 T 06-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 Gene3D G3DSA:1.10.3430.10 26 407 1.6E-140 T 06-07-2017 IPR029020 Ammonium/urea transporter LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 SUPERFAMILY SSF111352 27 407 4.58E-127 T 06-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LFZ55_RS18145 9d02a6be3ed521b21613533a34ba83fd 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 06-07-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 LFZ55_RS07840 fdcb9f0369ae578d56f8e34b44de7803 396 SUPERFAMILY SSF103473 1 385 7.06E-59 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS07840 fdcb9f0369ae578d56f8e34b44de7803 396 Gene3D G3DSA:1.20.1250.20 206 385 1.5E-20 T 06-07-2017 LFZ55_RS07840 fdcb9f0369ae578d56f8e34b44de7803 396 Gene3D G3DSA:1.20.1250.20 1 183 7.3E-31 T 06-07-2017 LFZ55_RS07840 fdcb9f0369ae578d56f8e34b44de7803 396 Pfam PF07690 Major Facilitator Superfamily 14 347 1.9E-41 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 259 1.6E-40 T 06-07-2017 IPR014162 Tol-Pal system, YbgF LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 Gene3D G3DSA:1.25.40.10 144 249 4.2E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 Pfam PF13432 Tetratricopeptide repeat 158 213 3.2E-6 T 06-07-2017 LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 Pfam PF16331 TolA binding protein trimerisation 37 110 2.0E-24 T 06-07-2017 IPR032519 YbgF, trimerisation domain GO:0070206 LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 Pfam PF13174 Tetratricopeptide repeat 217 249 2.1E-7 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS16835 fdbd13d530e3482675fe9f65edb54df6 262 SUPERFAMILY SSF48452 138 253 5.42E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.3E-34 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-43 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 06-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 06-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 06-07-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02065 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LFZ55_RS05280 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LFZ55_RS05280 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LFZ55_RS05280 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LFZ55_RS05280 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 06-07-2017 LFZ55_RS05280 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Gene3D G3DSA:2.60.120.10 288 375 1.2E-9 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Gene3D G3DSA:2.60.120.10 6 140 1.0E-65 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Gene3D G3DSA:2.60.120.10 238 273 1.0E-65 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Gene3D G3DSA:1.10.441.10 141 231 1.3E-24 T 06-07-2017 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Gene3D G3DSA:1.10.441.10 274 287 1.3E-24 T 06-07-2017 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 1.5E-74 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 06-07-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 PIRSF PIRSF001480 1 391 7.8E-111 T 06-07-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 4.9E-112 T 06-07-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 06-07-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 SUPERFAMILY SSF51182 1 374 2.02E-102 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS12870 622c429ae3b1a79e63a881aae55bd413 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 1.5E-130 T 06-07-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LFZ55_RS02235 16deff846b021955eb88318570016413 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.303 T 06-07-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LFZ55_RS02235 16deff846b021955eb88318570016413 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 7.2E-104 T 06-07-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LFZ55_RS02235 16deff846b021955eb88318570016413 272 Gene3D G3DSA:3.40.192.10 3 107 4.0E-37 T 06-07-2017 LFZ55_RS02235 16deff846b021955eb88318570016413 272 SUPERFAMILY SSF51735 102 269 1.15E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02235 16deff846b021955eb88318570016413 272 Gene3D G3DSA:3.40.50.720 108 244 1.3E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02235 16deff846b021955eb88318570016413 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.7E-22 T 06-07-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LFZ55_RS02235 16deff846b021955eb88318570016413 272 SUPERFAMILY SSF53223 3 101 4.83E-31 T 06-07-2017 LFZ55_RS02235 16deff846b021955eb88318570016413 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 9.7E-9 T 06-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LFZ55_RS13605 9fb80624b67e1c87216776184b2ef267 115 Gene3D G3DSA:1.20.58.80 14 114 2.9E-41 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS13605 9fb80624b67e1c87216776184b2ef267 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 1.9E-32 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS13605 9fb80624b67e1c87216776184b2ef267 115 SUPERFAMILY SSF46973 15 113 8.89E-34 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS13605 9fb80624b67e1c87216776184b2ef267 115 PIRSF PIRSF000699 10 115 1.1E-39 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 LFZ55_RS09120 fae4e1159aad790d8108a9b2ed25d727 264 Gene3D G3DSA:3.40.50.1400 1 151 3.9E-40 T 06-07-2017 LFZ55_RS09120 fae4e1159aad790d8108a9b2ed25d727 264 Gene3D G3DSA:3.40.50.1400 152 244 3.9E-20 T 06-07-2017 LFZ55_RS09120 fae4e1159aad790d8108a9b2ed25d727 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 2.9E-104 T 06-07-2017 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 LFZ55_RS09120 fae4e1159aad790d8108a9b2ed25d727 264 SUPERFAMILY SSF53800 2 257 8.37E-79 T 06-07-2017 LFZ55_RS09120 fae4e1159aad790d8108a9b2ed25d727 264 PIRSF PIRSF033579 1 264 7.4E-108 T 06-07-2017 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 SUPERFAMILY SSF109755 13 229 1.15E-70 T 06-07-2017 LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 Pfam PF01895 PhoU domain 27 111 4.1E-21 T 06-07-2017 IPR026022 PhoU domain LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 Pfam PF01895 PhoU domain 128 213 2.2E-17 T 06-07-2017 IPR026022 PhoU domain LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 Gene3D G3DSA:1.20.58.220 9 114 9.1E-37 T 06-07-2017 LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 6.6E-73 T 06-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 Gene3D G3DSA:1.20.58.220 127 233 1.6E-31 T 06-07-2017 LFZ55_RS24130 3cb273fa8efdc7ffc519db46e1fa4a84 241 PIRSF PIRSF003107 7 226 4.8E-68 T 06-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 SUPERFAMILY SSF52540 137 381 1.42E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Pfam PF00158 Sigma-54 interaction domain 137 303 4.4E-72 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 SUPERFAMILY SSF52172 6 181 2.99E-43 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Gene3D G3DSA:1.10.8.60 310 386 1.1E-22 T 06-07-2017 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 SMART SM00382 157 300 1.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Gene3D G3DSA:3.40.50.2300 3 126 7.2E-37 T 06-07-2017 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 SUPERFAMILY SSF46689 388 438 2.99E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Pfam PF00072 Response regulator receiver domain 10 118 1.2E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Gene3D G3DSA:1.10.10.60 391 438 6.9E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 SMART SM00448 7 118 6.1E-34 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS06075 72c8ad95a35ae0a8eaf663cb4cb161bd 445 Gene3D G3DSA:3.40.50.300 135 308 8.6E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24805 8376f8f17ab3ffe437d9d2ff87223722 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 52 6.0E-6 T 06-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 LFZ55_RS24805 8376f8f17ab3ffe437d9d2ff87223722 76 Gene3D G3DSA:2.10.260.10 1 56 1.6E-4 T 06-07-2017 LFZ55_RS24805 8376f8f17ab3ffe437d9d2ff87223722 76 SUPERFAMILY SSF89447 2 53 3.45E-6 T 06-07-2017 LFZ55_RS10180 cbde445b086613b0cb7def80ca8a1fb0 125 Pfam PF07087 Protein of unknown function (DUF1353) 18 109 1.6E-29 T 06-07-2017 IPR010767 Campylobacter phage CGC-2007, Cje0229 LFZ55_RS00365 2c024769ab680ef295b32fa37ee8bc31 226 SUPERFAMILY SSF52499 13 209 3.79E-46 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS00365 2c024769ab680ef295b32fa37ee8bc31 226 Gene3D G3DSA:3.40.50.850 13 212 7.3E-44 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS00365 2c024769ab680ef295b32fa37ee8bc31 226 Pfam PF00857 Isochorismatase family 20 172 3.3E-19 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS12685 72e6a19375cdbf1c0aab752af7d7bdfb 985 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 236 265 0.0022 T 06-07-2017 IPR006530 YD repeat LFZ55_RS12685 72e6a19375cdbf1c0aab752af7d7bdfb 985 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 690 1.3E-25 T 06-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.7E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 Gene3D G3DSA:1.10.260.40 2 58 3.4E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 Gene3D G3DSA:3.40.50.2300 167 330 7.7E-55 T 06-07-2017 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 SMART SM00354 1 71 2.2E-28 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 5.4E-37 T 06-07-2017 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 Gene3D G3DSA:3.40.50.2300 59 166 2.4E-35 T 06-07-2017 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.1E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.1E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 SUPERFAMILY SSF47413 1 56 3.84E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12250 e946f9e176144aa91105d5f6aa82af64 335 SUPERFAMILY SSF53822 61 331 1.65E-82 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 SUPERFAMILY SSF53659 2 362 9.6E-104 T 06-07-2017 LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 Gene3D G3DSA:3.40.718.10 1 362 2.3E-107 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 Pfam PF00994 Probable molybdopterin binding domain 373 532 6.5E-28 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 Gene3D G3DSA:3.40.980.10 370 561 7.6E-25 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 254 273 - T 06-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 SMART SM01329 4 358 1.3E-134 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 SUPERFAMILY SSF53218 370 561 1.26E-30 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 SMART SM00852 372 538 3.9E-30 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS09355 676afd4da8c23f8bde07d18128029b74 720 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 358 5.6E-84 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 7.9E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 7.9E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 7.9E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 7.9E-7 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 Gene3D G3DSA:3.20.20.100 9 322 3.2E-103 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 SUPERFAMILY SSF51430 1 321 9.69E-101 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS18340 1a1d45bb7f77022c9f660b35833ccc21 324 Pfam PF00248 Aldo/keto reductase family 15 312 1.1E-72 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 8.4E-34 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 SUPERFAMILY SSF52980 10 227 8.04E-78 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 231 157.099 T 06-07-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 SMART SM00927 59 157 3.1E-64 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 Gene3D G3DSA:3.40.600.10 8 227 1.8E-78 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LFZ55_RS04405 029656ba13db730787e8870efdc0b393 231 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 6.8E-112 T 06-07-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 LFZ55_RS16625 c348b41ba76a0c922bbb6ff20a923f43 251 SUPERFAMILY SSF53335 10 246 2.5E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16625 c348b41ba76a0c922bbb6ff20a923f43 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 29.635 T 06-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 LFZ55_RS16625 c348b41ba76a0c922bbb6ff20a923f43 251 Pfam PF08241 Methyltransferase domain 47 138 8.9E-23 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LFZ55_RS16625 c348b41ba76a0c922bbb6ff20a923f43 251 Gene3D G3DSA:3.40.50.150 3 175 2.4E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16625 c348b41ba76a0c922bbb6ff20a923f43 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 5.3E-68 T 06-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 SMART SM00984 324 420 2.5E-23 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 SUPERFAMILY SSF48179 206 299 1.68E-28 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Gene3D G3DSA:3.40.50.720 237 419 1.4E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 PIRSF PIRSF500136 1 420 8.4E-146 T 06-07-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 PIRSF PIRSF000124 4 419 1.5E-76 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Gene3D G3DSA:3.40.50.720 3 227 1.2E-61 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 7.6E-18 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 73.464 T 06-07-2017 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 186 3.2E-57 T 06-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.6E-26 T 06-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 SUPERFAMILY SSF51735 5 198 2.96E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 9.6E-119 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS23815 8a0ecd5cf569d3e18e3a46d310caa940 420 SUPERFAMILY SSF52413 311 419 5.75E-25 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 LFZ55_RS09535 f85ecc04d45fbf1f69a10f23827d7c1c 125 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 26 94 5.8E-24 T 06-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LFZ55_RS09535 f85ecc04d45fbf1f69a10f23827d7c1c 125 Pfam PF04347 Flagellar biosynthesis protein, FliO 38 120 3.1E-21 T 06-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LFZ55_RS06750 7f7a28139c195854fcdd28911ef0dcad 119 SUPERFAMILY SSF52833 4 118 1.89E-33 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS06750 7f7a28139c195854fcdd28911ef0dcad 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 118 4.8E-48 T 06-07-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 LFZ55_RS06750 7f7a28139c195854fcdd28911ef0dcad 119 Gene3D G3DSA:3.40.30.10 4 118 6.0E-47 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS06750 7f7a28139c195854fcdd28911ef0dcad 119 Pfam PF03960 ArsC family 8 117 1.3E-20 T 06-07-2017 IPR006660 Arsenate reductase-like LFZ55_RS02415 784be096c2b85030f38bd804acafd294 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 8.2E-64 T 06-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 LFZ55_RS02415 784be096c2b85030f38bd804acafd294 481 SUPERFAMILY SSF111283 22 480 1.24E-131 T 06-07-2017 LFZ55_RS02415 784be096c2b85030f38bd804acafd294 481 PIRSF PIRSF004919 14 481 3.0E-153 T 06-07-2017 IPR025502 TldD LFZ55_RS24840 0f08058a31174924665a6985db595bab 182 Pfam PF13728 F plasmid transfer operon protein 73 160 3.8E-10 T 06-07-2017 LFZ55_RS24840 0f08058a31174924665a6985db595bab 182 SUPERFAMILY SSF52833 54 170 1.75E-10 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24840 0f08058a31174924665a6985db595bab 182 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 4 173 7.2E-58 T 06-07-2017 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB LFZ55_RS24840 0f08058a31174924665a6985db595bab 182 Gene3D G3DSA:3.40.30.10 5 88 7.0E-5 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24840 0f08058a31174924665a6985db595bab 182 Gene3D G3DSA:3.40.30.10 89 145 1.6E-7 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.5E-58 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 SUPERFAMILY SSF52317 1 186 2.89E-58 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-13 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.5E-13 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.5E-13 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 Gene3D G3DSA:3.40.50.880 1 186 5.2E-70 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.0E-37 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.4E-5 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.4E-5 T 06-07-2017 LFZ55_RS01840 1ec2c19029f953f73d2346bf0c5a65f1 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 8.2E-94 T 06-07-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11130 1d821234a75e16fae03077c152633475 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 4.3E-10 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS11130 1d821234a75e16fae03077c152633475 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.7E-9 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 Gene3D G3DSA:3.90.79.10 3 151 1.3E-31 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 Pfam PF00293 NUDIX domain 7 146 5.6E-27 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 SUPERFAMILY SSF55811 5 160 5.28E-34 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS04410 9911331f2ab1c7dc0ef40016d7b0d853 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.968 T 06-07-2017 IPR022927 RNA pyrophosphohydrolase RppH LFZ55_RS22440 86a9d90b9ee68fd4e86d2d2085232e0e 237 Gene3D G3DSA:3.40.50.1000 30 236 5.8E-80 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS22440 86a9d90b9ee68fd4e86d2d2085232e0e 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 3.8E-51 T 06-07-2017 IPR005519 Acid phosphatase, class B-like LFZ55_RS22440 86a9d90b9ee68fd4e86d2d2085232e0e 237 SUPERFAMILY SSF56784 31 237 4.22E-74 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS22440 86a9d90b9ee68fd4e86d2d2085232e0e 237 PIRSF PIRSF017818 1 237 1.0E-122 T 06-07-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS22440 86a9d90b9ee68fd4e86d2d2085232e0e 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.4E-120 T 06-07-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 LFZ55_RS10910 6f8506547b0091e210d6f6ab0a9259c0 117 SUPERFAMILY SSF75169 1 117 7.2E-35 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS10910 6f8506547b0091e210d6f6ab0a9259c0 117 Pfam PF02635 DsrE/DsrF-like family 3 117 3.4E-23 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein LFZ55_RS10910 6f8506547b0091e210d6f6ab0a9259c0 117 Gene3D G3DSA:3.40.1260.10 1 117 6.7E-45 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS19660 b060dd186966fe30e80a914a483c4543 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.421 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LFZ55_RS19660 b060dd186966fe30e80a914a483c4543 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 190 1.5E-67 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LFZ55_RS19660 b060dd186966fe30e80a914a483c4543 206 Pfam PF01121 Dephospho-CoA kinase 4 177 1.3E-73 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LFZ55_RS19660 b060dd186966fe30e80a914a483c4543 206 SUPERFAMILY SSF52540 1 190 1.24E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19660 b060dd186966fe30e80a914a483c4543 206 Gene3D G3DSA:3.40.50.300 2 198 4.1E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22565 a4e29bba10fc285a732e8de8fe267d13 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.432 T 06-07-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LFZ55_RS22565 a4e29bba10fc285a732e8de8fe267d13 136 Pfam PF06146 Phosphate-starvation-inducible E 62 123 1.1E-16 T 06-07-2017 IPR020948 Phosphate-starvation-induced PsiE-like LFZ55_RS22565 a4e29bba10fc285a732e8de8fe267d13 136 PIRSF PIRSF029598 1 136 1.6E-50 T 06-07-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LFZ55_RS03500 45ae71dbb75543d0041b093e5b28e4f9 567 SUPERFAMILY SSF56762 1 552 1.44E-165 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS03500 45ae71dbb75543d0041b093e5b28e4f9 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS03500 45ae71dbb75543d0041b093e5b28e4f9 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 1.3E-207 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 LFZ55_RS03500 45ae71dbb75543d0041b093e5b28e4f9 567 Gene3D G3DSA:1.10.645.10 1 552 2.9E-208 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS03500 45ae71dbb75543d0041b093e5b28e4f9 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 Pfam PF00128 Alpha amylase, catalytic domain 26 367 6.0E-21 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 Gene3D G3DSA:3.20.20.80 2 405 2.0E-69 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 PIRSF PIRSF001021 1 494 1.6E-214 T 06-07-2017 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 SUPERFAMILY SSF51011 405 491 1.94E-28 T 06-07-2017 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 SMART SM00642 4 402 1.4E-58 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 SUPERFAMILY SSF51445 6 393 3.91E-91 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 416 491 2.1E-4 T 06-07-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LFZ55_RS09610 b5ec20953f543f8f4e53435dcd29de7b 494 Gene3D G3DSA:2.60.40.1180 408 491 2.8E-29 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS13445 ac5e34ba1a85492f208572ecc6d346e1 154 SUPERFAMILY SSF54001 33 154 2.88E-39 T 06-07-2017 LFZ55_RS13445 ac5e34ba1a85492f208572ecc6d346e1 154 Gene3D G3DSA:3.90.1720.10 38 154 3.9E-40 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS13445 ac5e34ba1a85492f208572ecc6d346e1 154 Pfam PF00877 NlpC/P60 family 47 153 2.9E-29 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 148 163 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 14 215 1.2E-84 T 06-07-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 148 168 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 218 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 15 34 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 190 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 34 54 3.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 196 208 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS18845 55030b1a29b785b06aa10d4929337d70 219 Pfam PF00813 FliP family 17 215 1.5E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS11230 f6a1326cb5af60f35e80b8e66d7ff6cc 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.364 T 06-07-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LFZ55_RS11230 f6a1326cb5af60f35e80b8e66d7ff6cc 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 1.2E-92 T 06-07-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LFZ55_RS11230 f6a1326cb5af60f35e80b8e66d7ff6cc 196 SUPERFAMILY SSF142695 3 173 1.57E-66 T 06-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LFZ55_RS11230 f6a1326cb5af60f35e80b8e66d7ff6cc 196 Pfam PF00925 GTP cyclohydrolase II 4 170 7.1E-68 T 06-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LFZ55_RS13190 39678a3190948fc2bdd710d00a18066e 96 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 13 87 1.3E-29 T 06-07-2017 IPR010437 Type III secretion system SsaH LFZ55_RS13190 39678a3190948fc2bdd710d00a18066e 96 Pfam PF06287 Protein of unknown function (DUF1039) 23 87 1.4E-25 T 06-07-2017 IPR010437 Type III secretion system SsaH LFZ55_RS01230 8d389a3d47b451477c1a00a1bbebbac9 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.645 T 06-07-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LFZ55_RS01230 8d389a3d47b451477c1a00a1bbebbac9 250 Gene3D G3DSA:3.40.1630.10 1 56 4.4E-28 T 06-07-2017 LFZ55_RS01230 8d389a3d47b451477c1a00a1bbebbac9 250 Gene3D G3DSA:3.40.50.150 57 246 2.4E-73 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01230 8d389a3d47b451477c1a00a1bbebbac9 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 7.1E-106 T 06-07-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LFZ55_RS01230 8d389a3d47b451477c1a00a1bbebbac9 250 SUPERFAMILY SSF53335 5 246 1.91E-75 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 Gene3D G3DSA:1.10.10.10 2 133 1.2E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 SUPERFAMILY SSF46785 3 133 2.77E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 Pfam PF01047 MarR family 29 85 6.9E-13 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 1.6E-11 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.6E-11 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.6E-11 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.6E-11 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS04850 4ff16914ecb64fd089c207262434771f 134 SMART SM00347 24 122 1.8E-17 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS11765 ae0f583b6d484e5932222ecf54a0a7aa 191 SUPERFAMILY SSF46689 18 114 1.24E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11765 ae0f583b6d484e5932222ecf54a0a7aa 191 Pfam PF13551 Winged helix-turn helix 11 73 1.2E-18 T 06-07-2017 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 Gene3D G3DSA:3.40.430.10 129 363 8.6E-70 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 2.4E-78 T 06-07-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 Gene3D G3DSA:3.40.140.10 2 128 3.2E-36 T 06-07-2017 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 SUPERFAMILY SSF53597 144 362 2.62E-57 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 Pfam PF01872 RibD C-terminal domain 147 362 1.1E-61 T 06-07-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 SUPERFAMILY SSF53927 3 145 3.35E-49 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 3.0E-154 T 06-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 PIRSF PIRSF006769 1 367 1.9E-138 T 06-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 LFZ55_RS18365 8a821dd78fd3093cc9c527359ebf4df5 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 5.5E-23 T 06-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LFZ55_RS21605 e848a866f353e28fe046ff50ce036d56 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 66.18 T 06-07-2017 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 LFZ55_RS21605 e848a866f353e28fe046ff50ce036d56 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 5.0E-46 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS21605 e848a866f353e28fe046ff50ce036d56 228 Gene3D G3DSA:3.40.225.10 2 227 3.8E-70 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS21605 e848a866f353e28fe046ff50ce036d56 228 SMART SM01007 6 194 1.4E-67 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS21605 e848a866f353e28fe046ff50ce036d56 228 SUPERFAMILY SSF53639 2 219 6.28E-69 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.9E-92 T 06-07-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 06-07-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 SUPERFAMILY SSF56219 1 267 3.14E-87 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 Gene3D G3DSA:3.60.10.10 1 267 1.1E-86 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 2.0E-29 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.2E-108 T 06-07-2017 LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 06-07-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LFZ55_RS13680 c0fa0864d09c8ea255e4168fb02b5b1c 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 06-07-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 SUPERFAMILY SSF82689 997 1097 1.44E-26 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 SUPERFAMILY SSF82861 845 928 1.29E-8 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 Pfam PF00924 Mechanosensitive ion channel 887 1086 4.8E-61 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 Gene3D G3DSA:2.30.30.60 945 994 8.9E-18 T 06-07-2017 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 Gene3D G3DSA:3.30.70.100 999 1084 9.5E-24 T 06-07-2017 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 2.1E-93 T 06-07-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 SUPERFAMILY SSF50182 930 995 6.87E-17 T 06-07-2017 IPR010920 LSM domain LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 4.1E-61 T 06-07-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain LFZ55_RS18070 16f0bf0a72f3cd49dd2a0d8ca765b20a 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.935 T 06-07-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 3.3E-119 T 06-07-2017 IPR028053 Membrane insertase YidC, N-terminal LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 3.0E-69 T 06-07-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.3E-109 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 Pfam PF02096 60Kd inner membrane protein 354 533 1.3E-60 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LFZ55_RS24175 583dd8144b3c1b500bc7c4076ce9d69d 548 Pfam PF14849 YidC periplasmic domain 61 343 5.6E-91 T 06-07-2017 IPR028053 Membrane insertase YidC, N-terminal LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 SMART SM00257 116 160 8.1E-11 T 06-07-2017 IPR018392 LysM domain LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 Pfam PF01476 LysM domain 117 159 6.1E-9 T 06-07-2017 IPR018392 LysM domain LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 SUPERFAMILY SSF51261 116 370 1.2E-53 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 Pfam PF01551 Peptidase family M23 273 366 1.1E-31 T 06-07-2017 IPR016047 Peptidase M23 LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 Gene3D G3DSA:2.70.70.10 238 371 2.5E-42 T 06-07-2017 LFZ55_RS04825 f5c87427b984dc7264ae4df39d2ec25b 373 Gene3D G3DSA:3.10.350.10 115 159 2.0E-11 T 06-07-2017 IPR018392 LysM domain LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 SMART SM00346 13 102 1.2E-36 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 Gene3D G3DSA:3.30.450.40 86 260 1.4E-68 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 3.1E-46 T 06-07-2017 IPR014757 Transcription regulator IclR, C-terminal LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 SUPERFAMILY SSF46785 13 86 1.43E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10315 051e3374a111214ea6c0f5401fad42d5 263 SUPERFAMILY SSF55781 77 258 4.45E-55 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS18885 8e7219f50bce7a0b8997222fa41e3f51 197 Pfam PF13327 Type III secretion system subunit 10 169 2.2E-28 T 06-07-2017 IPR025292 Type III secretion system protein LFZ55_RS00855 5eeaa5afbd1fc8d26fc996df220ed7a3 309 SUPERFAMILY SSF51658 8 237 1.57E-9 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS00855 5eeaa5afbd1fc8d26fc996df220ed7a3 309 Pfam PF16154 Domain of unknown function (DUF4862) 8 296 6.6E-95 T 06-07-2017 IPR032344 Protein of unknown function DUF4862 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 322 1.7E-166 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 Gene3D G3DSA:3.30.540.10 168 322 5.3E-36 T 06-07-2017 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 Gene3D G3DSA:3.30.540.10 4 167 7.9E-60 T 06-07-2017 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 PIRSF PIRSF004532 1 323 1.8E-132 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 321 3.8E-120 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS03930 7daf5ca08c2799e728cdc7b7287f96f1 323 SUPERFAMILY SSF56655 2 322 3.89E-99 T 06-07-2017 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 SUPERFAMILY SSF55681 3 247 1.08E-80 T 06-07-2017 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 Gene3D G3DSA:3.90.1550.10 1 247 3.4E-85 T 06-07-2017 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 Gene3D G3DSA:3.30.390.50 249 333 5.7E-17 T 06-07-2017 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 2.7E-21 T 06-07-2017 IPR019491 Lipoate protein ligase, C-terminal LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 4.5E-9 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.542 T 06-07-2017 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 329 1.3E-140 T 06-07-2017 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 Reactome: R-HSA-389661 LFZ55_RS20430 36c985cd3ae03acf47cf63bfcd14eade 338 SUPERFAMILY SSF82649 248 334 6.8E-26 T 06-07-2017 LFZ55_RS05250 ac428b1c98eef16f22657f6b4808745f 359 Pfam PF13406 Transglycosylase SLT domain 57 351 5.3E-90 T 06-07-2017 IPR031304 Transglycosylase SLT domain 2 LFZ55_RS05250 ac428b1c98eef16f22657f6b4808745f 359 SUPERFAMILY SSF53955 46 354 4.28E-98 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS05250 ac428b1c98eef16f22657f6b4808745f 359 Gene3D G3DSA:1.10.530.10 111 164 7.7E-58 T 06-07-2017 LFZ55_RS05250 ac428b1c98eef16f22657f6b4808745f 359 Gene3D G3DSA:1.10.530.10 245 354 7.7E-58 T 06-07-2017 LFZ55_RS05250 ac428b1c98eef16f22657f6b4808745f 359 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 353 2.1E-125 T 06-07-2017 IPR011757 Lytic transglycosylase MltB LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 06-07-2017 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.8E-239 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.4E-58 T 06-07-2017 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Gene3D G3DSA:3.40.50.300 3 208 6.8E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 SUPERFAMILY SSF52540 6 219 2.02E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 06-07-2017 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.088 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LFZ55_RS02000 3a3a20f26d24cb1cdb0d052fa7145dee 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 06-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LFZ55_RS21615 9952b6e9395c0d952371905c05200676 216 SMART SM00934 5 207 4.2E-35 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21615 9952b6e9395c0d952371905c05200676 216 Hamap MF_01267 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [ulaD]. 1 216 68.986 T 06-07-2017 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD GO:0000287|GO:0019854|GO:0033982 KEGG: 00040+4.1.1.85|KEGG: 00053+4.1.1.85|MetaCyc: PWY-6961 LFZ55_RS21615 9952b6e9395c0d952371905c05200676 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.2E-30 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LFZ55_RS21615 9952b6e9395c0d952371905c05200676 216 Gene3D G3DSA:3.20.20.70 2 215 5.7E-80 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS21615 9952b6e9395c0d952371905c05200676 216 SUPERFAMILY SSF51366 2 215 6.93E-40 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 SUPERFAMILY SSF53901 1 253 4.04E-63 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 Gene3D G3DSA:3.40.47.10 263 404 2.9E-48 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 SMART SM00825 Beta-ketoacyl synthase 4 406 2.4E-12 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 3.2E-29 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 2.1E-39 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 Gene3D G3DSA:3.40.47.10 6 259 3.6E-54 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS07370 2618da0d48e8593bab9eb09d678564b3 406 SUPERFAMILY SSF53901 215 403 3.91E-60 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 06-07-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 Gene3D G3DSA:2.40.37.10 263 419 2.4E-57 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 Gene3D G3DSA:3.20.20.10 36 262 2.2E-63 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 418 3.3E-138 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 276 5.0E-62 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.4E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.4E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.4E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.4E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.4E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.173 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-28 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-28 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-28 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-28 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 SUPERFAMILY SSF50621 250 419 2.51E-58 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 SUPERFAMILY SSF51419 25 276 1.25E-56 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 06-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LFZ55_RS04355 1e427f4e51189dfedeb2db57250fd3e0 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 2.0E-15 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 LFZ55_RS19665 416162f21cd1c8e2d59104de10c4147e 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 2.2E-78 T 06-07-2017 IPR009777 Cell division protein ZapD LFZ55_RS19665 416162f21cd1c8e2d59104de10c4147e 247 Gene3D G3DSA:2.60.440.10 174 247 2.1E-35 T 06-07-2017 IPR027462 Z ring-associated protein D, C-terminal domain LFZ55_RS19665 416162f21cd1c8e2d59104de10c4147e 247 Gene3D G3DSA:1.10.3900.10 13 173 8.8E-67 T 06-07-2017 LFZ55_RS19665 416162f21cd1c8e2d59104de10c4147e 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.711 T 06-07-2017 IPR009777 Cell division protein ZapD LFZ55_RS19665 416162f21cd1c8e2d59104de10c4147e 247 SUPERFAMILY SSF160950 3 247 1.44E-92 T 06-07-2017 LFZ55_RS11715 870bf50aa06ec8ae9be6d9bfe7bdc404 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 1.5E-17 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS11715 870bf50aa06ec8ae9be6d9bfe7bdc404 176 SUPERFAMILY SSF81342 4 172 4.16E-24 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 5 68 3.2E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 1.1E-25 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00950 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.6E-33 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS15175 3140955db227606695f7fcf35129f110 256 SMART SM00644 7 158 6.4E-32 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15175 3140955db227606695f7fcf35129f110 256 SUPERFAMILY SSF47090 174 254 8.63E-20 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15175 3140955db227606695f7fcf35129f110 256 Gene3D G3DSA:3.40.80.10 2 177 4.7E-57 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15175 3140955db227606695f7fcf35129f110 256 SUPERFAMILY SSF55846 9 174 2.22E-46 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS15175 3140955db227606695f7fcf35129f110 256 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 158 1.3E-17 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 PRINTS PR00207 Flagellin signature 37 54 5.2E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 PRINTS PR00207 Flagellin signature 111 134 5.2E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 PRINTS PR00207 Flagellin signature 76 95 5.2E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Pfam PF08884 Flagellin D3 domain 190 281 1.6E-24 T 06-07-2017 IPR014981 Flagellin D3 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Gene3D G3DSA:1.20.1330.10 54 170 4.1E-60 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Gene3D G3DSA:1.20.1330.10 404 455 4.1E-60 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 SUPERFAMILY SSF64518 1 499 8.37E-130 T 06-07-2017 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 3.1E-44 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Gene3D G3DSA:2.170.280.10 280 403 1.7E-44 T 06-07-2017 LFZ55_RS05585 8939b2c65a358241f6b5d8332d72f5a8 499 Pfam PF00700 Bacterial flagellin C-terminal helical region 413 498 2.7E-31 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LFZ55_RS02395 456cba48ec7da21c5455b945875aaef0 162 PIRSF PIRSF018472 2 162 1.4E-57 T 06-07-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type LFZ55_RS02395 456cba48ec7da21c5455b945875aaef0 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.3E-42 T 06-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LFZ55_RS02395 456cba48ec7da21c5455b945875aaef0 162 Pfam PF04093 rod shape-determining protein MreD 5 155 6.4E-46 T 06-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 06-07-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 SUPERFAMILY SSF51621 5 290 9.42E-97 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 Gene3D G3DSA:3.20.20.60 5 286 2.3E-98 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 5.9E-133 T 06-07-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.121 T 06-07-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 LFZ55_RS18595 d4fb5b26375b47647260a295c054ef07 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 250 1.2E-47 T 06-07-2017 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 3.8E-23 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 Gene3D G3DSA:1.10.443.10 117 289 2.0E-52 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 296 58.189 T 06-07-2017 IPR023009 Tyrosine recombinase XerC/XerD LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 Pfam PF00589 Phage integrase family 115 282 7.3E-53 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 298 6.8E-109 T 06-07-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 SUPERFAMILY SSF56349 109 294 2.41E-54 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 SUPERFAMILY SSF47823 9 100 1.41E-9 T 06-07-2017 IPR010998 Integrase, Lambda-type, N-terminal LFZ55_RS23695 4c62764b57c8def05ee00c57d1e50d5b 300 Gene3D G3DSA:1.10.150.130 7 103 1.1E-23 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 Pfam PF17152 Periplasmic sensor domain 43 142 4.8E-28 T 06-07-2017 IPR033417 Periplasmic sensor domain CHASE8 LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 Gene3D G3DSA:3.30.70.270 249 403 3.2E-42 T 06-07-2017 LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 SUPERFAMILY SSF55073 252 401 2.28E-36 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 403 3.5E-33 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 SMART SM00267 236 406 5.6E-49 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS05805 851d5a37ea5132255d55b42398b60567 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 402 1.9E-41 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS24590 b260dd01d9bd692bb96f4c163ba1c324 435 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 3 355 1.7E-69 T 06-07-2017 IPR007001 Bacterial shufflon protein, N-terminal LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 Pfam PF04055 Radical SAM superfamily 146 323 2.4E-30 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.055 T 06-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 06-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 96 2.4E-21 T 06-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 6.8E-111 T 06-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 Gene3D G3DSA:3.80.30.20 138 377 2.7E-76 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 SMART SM00729 140 365 1.3E-55 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 SUPERFAMILY SSF102114 110 371 1.83E-54 T 06-07-2017 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 3.5E-201 T 06-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LFZ55_RS16355 e201fcb34bd0ce501004062ffba80dfa 441 Gene3D G3DSA:2.40.50.140 380 441 3.2E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 5.5E-48 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 06-07-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 SUPERFAMILY SSF50891 1 162 1.01E-59 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 PIRSF PIRSF001467 1 164 1.1E-28 T 06-07-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LFZ55_RS17855 fe8ceba71d5c7663cff64a84da2d52ad 164 Gene3D G3DSA:2.40.100.10 2 162 1.6E-55 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 SMART SM00347 40 140 3.8E-15 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 Gene3D G3DSA:1.10.10.10 1 156 5.0E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 Pfam PF01047 MarR family 50 104 6.0E-12 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 SUPERFAMILY SSF46785 38 157 1.09E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 6.8E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 6.8E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 6.8E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12425 c0d7b01a8c1b9912d8041e9bf7b29e79 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 6.8E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS20925 263a7a5ed8ecdbf495609b631664c5e6 154 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 39 142 8.1E-36 T 06-07-2017 IPR022260 Integrating conjugative element protein PilL, PFGI-1 LFZ55_RS01365 4983a1722397c66f74693bc3bffe4d4d 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.3E-37 T 06-07-2017 IPR003744 Protein of unknown function DUF165 LFZ55_RS01365 4983a1722397c66f74693bc3bffe4d4d 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 2.4E-67 T 06-07-2017 IPR003744 Protein of unknown function DUF165 LFZ55_RS02860 0a15b15120cb5bcac3dd88b550e9dccb 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 34.848 T 06-07-2017 IPR011194 Uncharacterised protein family UPF0306 LFZ55_RS02860 0a15b15120cb5bcac3dd88b550e9dccb 147 PIRSF PIRSF009554 1 145 1.9E-58 T 06-07-2017 IPR011194 Uncharacterised protein family UPF0306 LFZ55_RS02860 0a15b15120cb5bcac3dd88b550e9dccb 147 SUPERFAMILY SSF50475 6 140 2.47E-16 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS02860 0a15b15120cb5bcac3dd88b550e9dccb 147 Gene3D G3DSA:2.30.110.10 13 139 5.7E-8 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.4E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.4E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 2.0E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 SMART SM00895 106 227 2.8E-15 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 Gene3D G3DSA:1.20.120.530 104 221 2.0E-18 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 SUPERFAMILY SSF48008 106 225 2.35E-20 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 Pfam PF07729 FCD domain 108 224 2.7E-19 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 SMART SM00345 18 77 1.2E-19 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 Gene3D G3DSA:1.10.10.10 4 78 2.1E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23975 02970b9bc1be90394b4ca144f138f18a 234 SUPERFAMILY SSF46785 10 81 1.96E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 06-07-2017 IPR013061 Tryptophan/tryrosine permease, conserved site LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.3E-135 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.2E-90 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS09740 738786c0d0dfb65efad5394ab2770168 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 8.9E-140 T 06-07-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 LFZ55_RS02925 b0ad3fced07f145882b59146b972b01b 523 SMART SM00858 22 92 2.8E-13 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 LFZ55_RS02925 b0ad3fced07f145882b59146b972b01b 523 Pfam PF08666 SAF domain 22 91 9.2E-13 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 LFZ55_RS02925 b0ad3fced07f145882b59146b972b01b 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 3.7E-145 T 06-07-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LFZ55_RS02925 b0ad3fced07f145882b59146b972b01b 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 79.705 T 06-07-2017 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 LFZ55_RS02925 b0ad3fced07f145882b59146b972b01b 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 2.7E-282 T 06-07-2017 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 06-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:3.30.70.1430 568 670 1.1E-40 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 135 182 3.45E-27 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 274 330 3.45E-27 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:3.30.70.1430 38 139 5.7E-37 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82714 724 810 2.62E-23 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82714 182 271 4.32E-19 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 38 132 4.13E-28 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82866 841 1029 8.37E-44 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:1.10.3850.10 816 1030 9.0E-56 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:1.10.3850.10 279 498 6.1E-59 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:3.30.2090.10 723 810 3.9E-28 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82866 296 497 6.54E-47 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Gene3D G3DSA:3.30.2090.10 181 275 4.6E-23 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 566 670 3.35E-33 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 810 858 2.3E-25 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 SUPERFAMILY SSF82693 673 723 2.3E-25 T 06-07-2017 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.2E-115 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02290 ef467891e46c5533f0a7ace258d0092e 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 Pfam PF00425 chorismate binding enzyme 242 502 1.5E-81 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 PIRSF PIRSF001373 1 520 1.1E-245 T 06-07-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 Gene3D G3DSA:3.60.120.10 4 516 2.5E-157 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.8E-24 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.8E-24 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.8E-24 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.8E-24 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 4.1E-263 T 06-07-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 SUPERFAMILY SSF56322 8 512 5.23E-162 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS11155 dd03a00167f07444b4cf78ffc7bb3cb8 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 2.7E-11 T 06-07-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 SUPERFAMILY SSF49503 314 466 2.78E-19 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Pfam PF07732 Multicopper oxidase 52 166 9.1E-26 T 06-07-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 SUPERFAMILY SSF49503 3 165 1.44E-23 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.004 T 06-07-2017 IPR026589 Cell division protein FtsP GO:0043093 LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 SUPERFAMILY SSF49503 172 310 2.63E-29 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Gene3D G3DSA:2.60.40.420 171 288 3.1E-30 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Gene3D G3DSA:2.60.40.420 363 467 9.7E-12 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 3.3E-4 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Gene3D G3DSA:2.60.40.420 32 170 2.9E-20 T 06-07-2017 IPR008972 Cupredoxin LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Pfam PF07731 Multicopper oxidase 359 468 3.2E-13 T 06-07-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LFZ55_RS03385 df5b762585a7fc5c9d6d800e885a727d 470 Pfam PF00394 Multicopper oxidase 219 287 2.5E-4 T 06-07-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 LFZ55_RS03170 f1d4a66ae70c89880ead25c4fc3ee489 168 Gene3D G3DSA:3.40.470.10 2 163 1.1E-54 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS03170 f1d4a66ae70c89880ead25c4fc3ee489 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 2.5E-22 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS03170 f1d4a66ae70c89880ead25c4fc3ee489 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 46.64 T 06-07-2017 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 LFZ55_RS03170 f1d4a66ae70c89880ead25c4fc3ee489 168 SUPERFAMILY SSF52141 2 162 9.81E-45 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LFZ55_RS13100 ce191a97518a3d94bd5a93679efc53b5 457 PIRSF PIRSF006603 4 456 3.9E-60 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS13100 ce191a97518a3d94bd5a93679efc53b5 457 Pfam PF01554 MatE 244 405 1.1E-36 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS13100 ce191a97518a3d94bd5a93679efc53b5 457 Pfam PF01554 MatE 17 177 1.3E-40 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS13100 ce191a97518a3d94bd5a93679efc53b5 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 6.6E-121 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS13100 ce191a97518a3d94bd5a93679efc53b5 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 52.589 T 06-07-2017 IPR022913 Multidrug resistance protein MdtK LFZ55_RS24550 5b8b8eca669f677b1a967b074f45fe7d 266 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 178 264 1.3E-16 T 06-07-2017 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1286 1372 4.51E-12 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1378 1470 1.2E-15 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 973 1066 4.2E-19 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1174 1261 2.9E-19 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 570 659 6.2E-18 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1479 1572 9.9E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 873 964 1.0E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1074 1167 3.8E-18 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 669 762 1.2E-18 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1581 1669 1.8E-19 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 PRINTS PR01369 Intimin signature 377 389 8.1E-12 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 PRINTS PR01369 Intimin signature 220 239 8.1E-12 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 PRINTS PR01369 Intimin signature 192 207 8.1E-12 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 PRINTS PR01369 Intimin signature 290 309 8.1E-12 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 764 861 9.22E-19 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 770 868 7.9E-20 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 459 562 3.1E-6 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Gene3D G3DSA:2.60.40.920 1271 1373 5.0E-14 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF09134 Invasin, domain 3 1076 1161 4.0E-8 T 06-07-2017 IPR015217 Invasin, domain 3 LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1066 1158 1.43E-18 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF11924 Invasin beta-domain of outer membrane 66 342 1.9E-102 T 06-07-2017 IPR024519 Invasin beta-domain of outer membrane LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 1379 1466 4.4E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 1273 1363 2.9E-9 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 1582 1667 2.0E-8 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 967 1056 1.1E-11 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 775 861 1.3E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 1482 1565 2.4E-11 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 867 957 4.2E-11 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 671 758 1.4E-14 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 571 658 3.2E-12 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 Pfam PF02369 Bacterial Ig-like domain (group 1) 1176 1262 3.0E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1470 1571 2.16E-16 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 965 1066 2.16E-19 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 562 662 6.02E-16 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 772 862 6.7E-15 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 568 658 1.3E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1377 1468 4.4E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1174 1263 4.8E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1074 1164 3.7E-14 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1579 1667 5.3E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1477 1567 1.9E-9 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 973 1062 1.2E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 1277 1366 4.8E-6 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 872 961 2.5E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SMART SM00634 669 761 1.0E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1379 1473 3.14E-17 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 460 549 2.2E-5 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1174 1269 2.94E-18 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 661 765 5.49E-17 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 865 967 2.16E-15 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS09990 0c5dd5417afed8a2760897c2ff2aebe3 1811 SUPERFAMILY SSF49373 1571 1669 2.94E-19 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS00500 d8d2c57a169a1db366eb46cd94c78bf2 569 Pfam PF05170 AsmA family 1 540 1.8E-24 T 06-07-2017 IPR007844 AsmA LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SMART SM00671 2081 2116 1.0E-6 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SMART SM00671 2117 2153 15.0 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SUPERFAMILY SSF52540 1440 1571 1.45E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 241 8.3E-6 T 06-07-2017 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 284 296 8.3E-6 T 06-07-2017 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 334 8.3E-6 T 06-07-2017 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 287 293 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Gene3D G3DSA:3.40.50.150 221 423 2.2E-31 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SMART SM00490 1435 1525 0.0078 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Pfam PF08238 Sel1 repeat 2081 2112 6.1E-5 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Pfam PF08238 Sel1 repeat 2118 2147 0.11 T 06-07-2017 IPR006597 Sel1-like repeat LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Gene3D G3DSA:1.25.40.10 2069 2158 2.4E-15 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Gene3D G3DSA:3.40.50.300 1106 1191 1.2E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Gene3D G3DSA:3.40.50.300 929 1043 1.2E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SUPERFAMILY SSF81901 2073 2148 4.58E-12 T 06-07-2017 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SMART SM00487 931 1204 7.5E-6 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SUPERFAMILY SSF53335 189 413 9.46E-28 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Pfam PF00176 SNF2 family N-terminal domain 950 1207 4.0E-10 T 06-07-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Pfam PF00271 Helicase conserved C-terminal domain 1452 1525 4.3E-6 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 Gene3D G3DSA:3.40.50.300 1437 1526 2.4E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SUPERFAMILY SSF52540 1107 1200 2.45E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24200 4f3a6fa42f08757dd5917ab21dedd1af 2391 SUPERFAMILY SSF52540 885 1045 2.45E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08785 f7c2a67b05f67dc415f69ceb16df53bc 367 Pfam PF00534 Glycosyl transferases group 1 183 330 1.7E-34 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS08785 f7c2a67b05f67dc415f69ceb16df53bc 367 Pfam PF13439 Glycosyltransferase Family 4 14 168 5.1E-16 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS08785 f7c2a67b05f67dc415f69ceb16df53bc 367 SUPERFAMILY SSF53756 2 363 3.77E-72 T 06-07-2017 LFZ55_RS08785 f7c2a67b05f67dc415f69ceb16df53bc 367 Gene3D G3DSA:3.40.50.2000 185 330 9.9E-26 T 06-07-2017 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 Gene3D G3DSA:3.40.50.300 6 179 6.1E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 Gene3D G3DSA:1.10.8.60 180 252 1.4E-22 T 06-07-2017 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 SUPERFAMILY SSF46689 222 326 6.27E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 324 3.8E-161 T 06-07-2017 IPR014317 Transcription activator PspF LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 SUPERFAMILY SSF52540 9 248 2.3E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 SMART SM00382 28 180 2.7E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 Pfam PF00158 Sigma-54 interaction domain 9 170 1.2E-61 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 307 326 4.7E-6 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 290 307 4.7E-6 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 Pfam PF02954 Bacterial regulatory protein, Fis family 287 323 1.6E-6 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 Gene3D G3DSA:1.10.10.60 279 326 4.4E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS11390 a444800f2ab9afda6946139045bc3a65 326 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LFZ55_RS21365 e01775094ab93b400d3143a62c442c19 372 SUPERFAMILY SSF53383 6 367 2.85E-30 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS21365 e01775094ab93b400d3143a62c442c19 372 Gene3D G3DSA:3.40.640.10 26 240 3.0E-24 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS21365 e01775094ab93b400d3143a62c442c19 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 4.6E-182 T 06-07-2017 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 LFZ55_RS21365 e01775094ab93b400d3143a62c442c19 372 Pfam PF03841 L-seryl-tRNA selenium transferase 13 282 3.9E-13 T 06-07-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS08660 01e1c59e79446da5eb338edcd33b944a 618 Pfam PF05170 AsmA family 197 512 1.7E-21 T 06-07-2017 IPR007844 AsmA LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 342 6.6E-181 T 06-07-2017 IPR014259 Sulphite reductase, subunit A LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 Pfam PF17179 4Fe-4S dicluster domain 229 326 8.2E-31 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 Gene3D G3DSA:1.10.1060.10 199 341 6.8E-11 T 06-07-2017 LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 SUPERFAMILY SSF46548 201 341 1.83E-14 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS06145 00cec28626269e63c5116e5d046545ee 347 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS15565 ba650973348ef31fc3e4e48c86478b2f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.612 T 06-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS15565 ba650973348ef31fc3e4e48c86478b2f 172 Pfam PF07977 FabA-like domain 29 158 4.2E-54 T 06-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS15565 ba650973348ef31fc3e4e48c86478b2f 172 Gene3D G3DSA:3.10.129.10 2 169 1.1E-61 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS15565 ba650973348ef31fc3e4e48c86478b2f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 4.6E-98 T 06-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS15565 ba650973348ef31fc3e4e48c86478b2f 172 SUPERFAMILY SSF54637 3 169 2.15E-55 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS14910 6411eae4281c00976e89e567ec030fe2 198 Pfam PF03358 NADPH-dependent FMN reductase 4 143 3.6E-13 T 06-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LFZ55_RS14910 6411eae4281c00976e89e567ec030fe2 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.565 T 06-07-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LFZ55_RS14910 6411eae4281c00976e89e567ec030fe2 198 SUPERFAMILY SSF52218 1 197 4.85E-63 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS14910 6411eae4281c00976e89e567ec030fe2 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 1.1E-104 T 06-07-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LFZ55_RS14910 6411eae4281c00976e89e567ec030fe2 198 Gene3D G3DSA:3.40.50.360 1 197 2.4E-74 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS19370 d015689b363bb5cd18d43ab03ade14a8 266 SUPERFAMILY SSF53807 25 262 3.53E-57 T 06-07-2017 LFZ55_RS19370 d015689b363bb5cd18d43ab03ade14a8 266 Gene3D G3DSA:3.40.50.1980 142 262 3.4E-34 T 06-07-2017 LFZ55_RS19370 d015689b363bb5cd18d43ab03ade14a8 266 Gene3D G3DSA:3.40.50.1980 24 138 8.8E-35 T 06-07-2017 LFZ55_RS19370 d015689b363bb5cd18d43ab03ade14a8 266 Pfam PF01497 Periplasmic binding protein 26 217 2.0E-25 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LFZ55_RS19370 d015689b363bb5cd18d43ab03ade14a8 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 46.655 T 06-07-2017 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 3.4E-157 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 5.0E-16 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 SUPERFAMILY SSF53187 322 405 7.65E-83 T 06-07-2017 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 SUPERFAMILY SSF53187 1 209 7.65E-83 T 06-07-2017 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Pfam PF07687 Peptidase dimerisation domain 206 303 2.5E-11 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 SUPERFAMILY SSF55031 208 320 1.41E-43 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Gene3D G3DSA:3.40.630.10 322 406 3.0E-117 T 06-07-2017 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Gene3D G3DSA:3.40.630.10 1 208 3.0E-117 T 06-07-2017 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 PIRSF PIRSF037215 1 408 5.8E-182 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.099 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LFZ55_RS14130 12db7c61b2698f051a8421e1be4ef789 408 Gene3D G3DSA:3.30.70.360 209 319 4.2E-44 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 4.0E-22 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-44 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.8E-44 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-44 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.8E-44 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS02760 270e733f92b4dfc072572e092eefa61c 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 2.8E-27 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 Pfam PF07690 Major Facilitator Superfamily 34 400 1.3E-44 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.7E-270 T 06-07-2017 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 Gene3D G3DSA:1.20.1250.20 21 224 3.2E-53 T 06-07-2017 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 06-07-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 5.4E-169 T 06-07-2017 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 Gene3D G3DSA:1.20.1250.20 246 445 3.1E-47 T 06-07-2017 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 PIRSF PIRSF002808 5 451 1.8E-176 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS07825 caf116b3494b780e29581e78d585827b 452 SUPERFAMILY SSF103473 12 441 3.27E-84 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 06-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 06-07-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 372 585 1.6E-23 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 SUPERFAMILY SSF50621 482 585 4.53E-7 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 2.7E-74 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 1.6E-279 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.524 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 99 368 2.6E-73 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 PIRSF PIRSF001336 17 658 2.9E-256 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 SUPERFAMILY SSF51419 92 369 3.18E-67 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Gene3D G3DSA:2.40.37.10 479 611 1.3E-12 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Gene3D G3DSA:2.40.37.10 356 380 1.3E-12 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS03895 bcd02f2877f53b8d35a443e484477e4b 658 Gene3D G3DSA:3.20.20.10 94 355 1.0E-60 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 SUPERFAMILY SSF56762 12 585 3.66E-179 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 576 585 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 Pfam PF00374 Nickel-dependent hydrogenase 54 585 1.1E-231 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 Gene3D G3DSA:1.10.645.10 5 142 1.0E-206 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12470 25da1aac85c3d8ce37b1f3be00ab70f0 600 Gene3D G3DSA:1.10.645.10 186 585 1.0E-206 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS16505 84ea5d5151e219528a1bd735c8da5d80 86 SUPERFAMILY SSF159871 3 86 8.76E-26 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS16505 84ea5d5151e219528a1bd735c8da5d80 86 Gene3D G3DSA:3.30.1660.10 18 86 1.5E-27 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS16505 84ea5d5151e219528a1bd735c8da5d80 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 8.7E-17 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS01045 3d357f0f70bd31813ea49f17a0cfff72 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.0E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01045 3d357f0f70bd31813ea49f17a0cfff72 300 SUPERFAMILY SSF161098 93 280 6.93E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01045 3d357f0f70bd31813ea49f17a0cfff72 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 4.8E-16 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LFZ55_RS01045 3d357f0f70bd31813ea49f17a0cfff72 300 Gene3D G3DSA:1.10.3720.10 88 296 3.5E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 SUPERFAMILY SSF46785 3 142 2.28E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 Pfam PF01047 MarR family 31 89 1.2E-18 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.8E-29 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.8E-29 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.8E-29 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.8E-29 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 Gene3D G3DSA:1.10.10.10 2 139 5.2E-37 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 SMART SM00347 24 125 2.7E-31 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12995 5b9dd4f7febe005802650d673b51d240 146 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 3 145 42.865 T 06-07-2017 IPR023071 Transcriptional regulator, SlyA LFZ55_RS21380 b2a8e21ba1581760919a53e488a75242 258 Gene3D G3DSA:1.20.1250.20 86 229 9.1E-4 T 06-07-2017 LFZ55_RS21380 b2a8e21ba1581760919a53e488a75242 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 1.7E-158 T 06-07-2017 IPR020042 Protein of unknown function DUF4311 LFZ55_RS21380 b2a8e21ba1581760919a53e488a75242 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 4.9E-124 T 06-07-2017 IPR020042 Protein of unknown function DUF4311 LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 SUPERFAMILY SSF51735 2 353 1.23E-90 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 5.4E-178 T 06-07-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 Gene3D G3DSA:3.40.50.720 4 205 1.6E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 Gene3D G3DSA:3.90.25.10 304 363 8.7E-53 T 06-07-2017 LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 Gene3D G3DSA:3.90.25.10 206 247 8.7E-53 T 06-07-2017 LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 7.3E-162 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08720 e17eb69aa9aa86a3def73dade2e4c375 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.635 T 06-07-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 06-07-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 71.998 T 06-07-2017 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 SUPERFAMILY SSF53335 141 429 2.89E-78 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Gene3D G3DSA:3.40.50.150 232 429 1.4E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Gene3D G3DSA:3.30.70.1170 173 230 3.2E-29 T 06-07-2017 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 426 6.5E-78 T 06-07-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Gene3D G3DSA:1.10.940.10 2 147 8.4E-47 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 4.0E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 4.0E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 4.0E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 4.0E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 4.0E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Gene3D G3DSA:1.10.287.730 148 172 2.3E-15 T 06-07-2017 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 2.6E-186 T 06-07-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 Pfam PF01029 NusB family 6 127 9.4E-25 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS02200 438fbec1c48b99193b93b5a3d15fc4ca 429 SUPERFAMILY SSF48013 6 149 8.01E-35 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LFZ55_RS15395 258bf63dbbb66d9f0a75ec13c8530bb8 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 6 74 2.5E-33 T 06-07-2017 IPR009253 Protein of unknown function DUF905 LFZ55_RS15395 258bf63dbbb66d9f0a75ec13c8530bb8 77 Gene3D G3DSA:3.30.160.130 6 74 6.8E-35 T 06-07-2017 LFZ55_RS15395 258bf63dbbb66d9f0a75ec13c8530bb8 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 7 73 1.0E-20 T 06-07-2017 IPR009253 Protein of unknown function DUF905 LFZ55_RS15395 258bf63dbbb66d9f0a75ec13c8530bb8 77 SUPERFAMILY SSF54786 10 74 6.67E-27 T 06-07-2017 LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 1.9E-68 T 06-07-2017 IPR005126 NapC/NirT cytochrome c, N-terminal LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 SUPERFAMILY SSF48695 9 185 1.91E-54 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 Gene3D G3DSA:1.10.3820.10 12 185 3.0E-29 T 06-07-2017 LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 Gene3D G3DSA:1.10.3820.10 330 335 3.0E-29 T 06-07-2017 LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 2 382 5.1E-193 T 06-07-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 LFZ55_RS00100 a480b29862dc84822055a0377cf21fff 394 PIRSF PIRSF000014 1 385 3.3E-180 T 06-07-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 LFZ55_RS01765 fcf6f8cdb8a7eaed2b680925cc7ca65a 426 Hamap MF_02021 Cell division protein DamX [damX]. 1 426 24.874 T 06-07-2017 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 LFZ55_RS01765 fcf6f8cdb8a7eaed2b680925cc7ca65a 426 Gene3D G3DSA:3.30.70.1070 341 405 1.6E-5 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS01765 fcf6f8cdb8a7eaed2b680925cc7ca65a 426 SUPERFAMILY SSF110997 342 406 1.7E-7 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS01765 fcf6f8cdb8a7eaed2b680925cc7ca65a 426 Pfam PF05036 Sporulation related domain 343 415 8.8E-13 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 105 117 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 223 276 9.4E-11 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SUPERFAMILY SSF54292 3 79 5.52E-19 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 152 162 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Pfam PF00384 Molybdopterin oxidoreductase 565 640 8.0E-8 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 80 1.3E-11 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Pfam PF01568 Molydopterin dinucleotide binding domain 830 892 2.9E-7 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 6 657 3.3E-206 T 06-07-2017 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:2.20.25.90 229 276 2.6E-14 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:3.10.20.30 4 86 5.6E-8 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SUPERFAMILY SSF50692 816 893 5.2E-14 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 126 8.4E-15 T 06-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:2.40.40.20 818 891 1.8E-12 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SUPERFAMILY SSF53706 221 690 1.11E-84 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SMART SM00926 223 277 7.0E-10 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SMART SM00929 90 130 1.9E-19 T 06-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:3.40.50.740 280 342 9.1E-38 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:3.40.50.740 506 689 9.1E-38 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 SUPERFAMILY SSF54862 83 215 2.55E-34 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:3.30.70.20 200 228 1.9E-4 T 06-07-2017 LFZ55_RS07655 6f4cd11e9044bee10333d2c456db1e26 910 Gene3D G3DSA:3.30.70.20 149 159 1.9E-4 T 06-07-2017 LFZ55_RS06280 676616a2f595eb20f0435fc683ddc917 206 PIRSF PIRSF006170 1 206 2.7E-59 T 06-07-2017 IPR026039 Uncharacterised protein family UPF0070 LFZ55_RS06280 676616a2f595eb20f0435fc683ddc917 206 Gene3D G3DSA:1.25.40.10 70 185 2.0E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS06280 676616a2f595eb20f0435fc683ddc917 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.1E-55 T 06-07-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 LFZ55_RS06280 676616a2f595eb20f0435fc683ddc917 206 SUPERFAMILY SSF48452 88 185 1.01E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23520 c3fb43e7e76ab3b90d7030afc2e07b2d 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.9E-129 T 06-07-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 LFZ55_RS23520 c3fb43e7e76ab3b90d7030afc2e07b2d 483 PIRSF PIRSF006247 1 483 1.5E-185 T 06-07-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 LFZ55_RS23520 c3fb43e7e76ab3b90d7030afc2e07b2d 483 Pfam PF02386 Cation transport protein 37 477 3.8E-92 T 06-07-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 Gene3D G3DSA:3.40.50.150 1 280 8.3E-121 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.266 T 06-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.7E-117 T 06-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 SUPERFAMILY SSF53335 9 279 3.41E-101 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS01215 7fb0d8e5cfc6e7b07c63d1082c1b9321 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 Gene3D G3DSA:3.60.21.10 28 361 3.6E-98 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 507 8.7E-31 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 Gene3D G3DSA:3.90.780.10 363 539 6.9E-54 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 1.4E-16 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 SUPERFAMILY SSF55816 363 541 9.29E-52 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 207 224 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 32 50 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 417 440 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 283 303 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 484 503 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 PRINTS PR01607 Apyrase family signature 238 261 1.9E-63 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS17970 dd04292e0cb0d9d501a8db7f1d809f9b 550 SUPERFAMILY SSF56300 27 360 1.87E-95 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 406 2.6E-136 T 06-07-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 Gene3D G3DSA:3.20.20.140 70 352 1.3E-34 T 06-07-2017 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 Pfam PF01979 Amidohydrolase family 65 385 4.4E-13 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 Gene3D G3DSA:2.30.40.10 353 388 1.7E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 Gene3D G3DSA:2.30.40.10 6 69 2.8E-12 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 407 39.222 T 06-07-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 SUPERFAMILY SSF51556 68 367 3.06E-76 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 SUPERFAMILY SSF51338 8 68 1.68E-30 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS16670 16f40d3e474fa1c37cefdbbd771789a9 407 SUPERFAMILY SSF51338 369 406 1.68E-30 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS16115 f4d9ff035b4d7fe3c4c0996702049c5f 567 SUPERFAMILY SSF69255 257 349 9.94E-16 T 06-07-2017 LFZ55_RS16115 f4d9ff035b4d7fe3c4c0996702049c5f 567 Gene3D G3DSA:2.40.50.230 261 348 1.3E-11 T 06-07-2017 IPR006531 Gp5 N-terminal LFZ55_RS16115 f4d9ff035b4d7fe3c4c0996702049c5f 567 SUPERFAMILY SSF69349 340 515 1.1E-19 T 06-07-2017 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 SUPERFAMILY SSF52540 1 212 1.01E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.0E-15 T 06-07-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 4.7E-76 T 06-07-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 06-07-2017 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.937 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 PRINTS PR00094 Adenylate kinase signature 81 97 5.7E-36 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 PRINTS PR00094 Adenylate kinase signature 173 187 5.7E-36 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 PRINTS PR00094 Adenylate kinase signature 4 17 5.7E-36 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 PRINTS PR00094 Adenylate kinase signature 32 46 5.7E-36 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 PRINTS PR00094 Adenylate kinase signature 156 171 5.7E-36 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 Pfam PF00406 Adenylate kinase 5 186 1.8E-60 T 06-07-2017 LFZ55_RS18005 6d42ca8e7253d2132613653d5ede0e63 214 Gene3D G3DSA:3.40.50.300 1 212 1.6E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 36.151 T 06-07-2017 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 4.4E-15 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 1.3E-63 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 SUPERFAMILY SSF118215 18 400 1.44E-95 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS03110 2093f60b9384ef94c2d0918d7a973160 414 Gene3D G3DSA:1.10.3860.10 11 405 2.5E-85 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS20975 e54622410bb9e20778896d10864d0605 106 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 26 99 1.2E-24 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD LFZ55_RS20975 e54622410bb9e20778896d10864d0605 106 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 7 100 3.8E-29 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD LFZ55_RS17570 ec7f27218d190e73cdc3c0b27eaa988c 137 SUPERFAMILY SSF54637 1 135 9.41E-30 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS17570 ec7f27218d190e73cdc3c0b27eaa988c 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 3.5E-45 T 06-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 LFZ55_RS17570 ec7f27218d190e73cdc3c0b27eaa988c 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 55.4 T 06-07-2017 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 LFZ55_RS17570 ec7f27218d190e73cdc3c0b27eaa988c 137 Pfam PF03061 Thioesterase superfamily 50 127 1.8E-15 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 LFZ55_RS17570 ec7f27218d190e73cdc3c0b27eaa988c 137 Gene3D G3DSA:3.10.129.10 1 136 2.2E-48 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS16855 9d1f5e260488fb63e1c5df7201ffa087 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 1.1E-24 T 06-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LFZ55_RS16855 9d1f5e260488fb63e1c5df7201ffa087 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 3.0E-39 T 06-07-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 Pfam PF01750 Hydrogenase maturation protease 21 146 9.9E-37 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 Gene3D G3DSA:3.40.50.1450 3 160 4.4E-46 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 SUPERFAMILY SSF53163 3 158 2.04E-41 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 PRINTS PR00446 Hydrogen uptake protein signature 4 16 2.8E-28 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 PRINTS PR00446 Hydrogen uptake protein signature 68 84 2.8E-28 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 PRINTS PR00446 Hydrogen uptake protein signature 16 27 2.8E-28 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 PRINTS PR00446 Hydrogen uptake protein signature 36 53 2.8E-28 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 PRINTS PR00446 Hydrogen uptake protein signature 57 67 2.8E-28 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 4 155 4.8E-54 T 06-07-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 LFZ55_RS12480 9ab73b5e4143b408ecaba2b10641b621 202 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 150 7.6E-44 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS08005 e7f7eb95c01d4ef4fd6b6ea65fe80782 161 SUPERFAMILY SSF53955 6 155 1.33E-39 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS08005 e7f7eb95c01d4ef4fd6b6ea65fe80782 161 Pfam PF00959 Phage lysozyme 28 141 1.6E-11 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LFZ55_RS08005 e7f7eb95c01d4ef4fd6b6ea65fe80782 161 Gene3D G3DSA:1.10.530.40 6 153 3.0E-38 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 LFZ55_RS08005 e7f7eb95c01d4ef4fd6b6ea65fe80782 161 PRINTS PR00684 Phage T4 lysozyme signature 8 27 1.5E-5 T 06-07-2017 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 LFZ55_RS08005 e7f7eb95c01d4ef4fd6b6ea65fe80782 161 PRINTS PR00684 Phage T4 lysozyme signature 131 152 1.5E-5 T 06-07-2017 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 PIRSF PIRSF006246 1 125 1.7E-51 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 9.0E-64 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 6.3E-68 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.681 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.9E-47 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 SUPERFAMILY SSF50692 1 121 1.33E-47 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain LFZ55_RS19475 c743043138aca1146d219ce444a44a44 126 Gene3D G3DSA:2.40.40.20 1 124 1.0E-55 T 06-07-2017 LFZ55_RS14745 3d0401612f7ea65ebf0899ef99134594 193 Pfam PF13577 SnoaL-like domain 4 124 1.7E-13 T 06-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain LFZ55_RS14745 3d0401612f7ea65ebf0899ef99134594 193 Gene3D G3DSA:3.10.450.50 5 125 4.0E-14 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS14745 3d0401612f7ea65ebf0899ef99134594 193 SUPERFAMILY SSF54427 4 136 4.39E-22 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 TIGRFAM TIGR01933 hflK: HflK protein 97 356 1.3E-125 T 06-07-2017 IPR010201 HflK GO:0016021 LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 SMART SM00244 95 255 1.4E-44 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 Pfam PF01145 SPFH domain / Band 7 family 99 270 3.4E-32 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 PRINTS PR00721 Stomatin signature 102 124 9.2E-7 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 PRINTS PR00721 Stomatin signature 184 201 9.2E-7 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 PRINTS PR00721 Stomatin signature 149 170 9.2E-7 T 06-07-2017 IPR001972 Stomatin family GO:0016020 LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 Pfam PF12221 Bacterial membrane protein N terminal 1 58 5.7E-15 T 06-07-2017 IPR020980 Menbrane protein HflK, N-terminal LFZ55_RS21715 23c5cb67097845119dcf2691d560af69 419 SUPERFAMILY SSF117892 128 259 1.57E-21 T 06-07-2017 IPR001107 Band 7 domain LFZ55_RS14590 d7061a56ed96caf01471f88f81739cdd 184 Gene3D G3DSA:1.10.3480.10 1 181 4.0E-49 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS14590 d7061a56ed96caf01471f88f81739cdd 184 PIRSF PIRSF004690 1 184 9.2E-56 T 06-07-2017 IPR026269 Tat proofreading chaperone DmsD-type LFZ55_RS14590 d7061a56ed96caf01471f88f81739cdd 184 SUPERFAMILY SSF89155 2 180 1.11E-40 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS14590 d7061a56ed96caf01471f88f81739cdd 184 Pfam PF02613 Nitrate reductase delta subunit 44 147 1.7E-12 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 249 52.374 T 06-07-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 249 7.6E-154 T 06-07-2017 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 PIRSF PIRSF001273 1 249 6.1E-104 T 06-07-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 SUPERFAMILY SSF54197 29 247 2.89E-91 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 Gene3D G3DSA:3.30.428.30 26 249 1.8E-104 T 06-07-2017 LFZ55_RS23135 ccb7d05f3e048f55fc335bdf3e143d40 249 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 29 247 2.8E-91 T 06-07-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 Gene3D G3DSA:3.40.50.1970 4 160 3.8E-30 T 06-07-2017 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 Gene3D G3DSA:1.20.1090.10 162 358 4.1E-50 T 06-07-2017 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 5.4E-46 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 PIRSF PIRSF000112 2 361 9.2E-119 T 06-07-2017 LFZ55_RS17555 79cbfacf2be5cacb042f491ff86f821c 362 SUPERFAMILY SSF56796 11 358 1.19E-56 T 06-07-2017 LFZ55_RS07690 544e530471ea67b87ce54089d5466eee 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.1E-147 T 06-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07690 544e530471ea67b87ce54089d5466eee 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.836 T 06-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LFZ55_RS07690 544e530471ea67b87ce54089d5466eee 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 3.9E-90 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 SMART SM00345 13 72 1.5E-26 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 Pfam PF07729 FCD domain 96 219 9.7E-18 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 SMART SM00895 96 220 5.6E-15 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 Gene3D G3DSA:1.10.10.10 5 77 6.5E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.2E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.2E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 SUPERFAMILY SSF48008 94 226 1.65E-21 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 4.4E-23 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 Gene3D G3DSA:1.20.120.530 95 226 2.9E-22 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS03090 47bde257586e303bcdbe48c9a8614c19 258 SUPERFAMILY SSF46785 2 76 6.76E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09970 dfd748da0b41f74e412fa5c6a3db8d64 319 Gene3D G3DSA:3.40.50.1980 207 317 6.6E-31 T 06-07-2017 LFZ55_RS09970 dfd748da0b41f74e412fa5c6a3db8d64 319 Gene3D G3DSA:3.40.50.1980 20 206 1.1E-45 T 06-07-2017 LFZ55_RS09970 dfd748da0b41f74e412fa5c6a3db8d64 319 SUPERFAMILY SSF53807 32 317 7.36E-76 T 06-07-2017 LFZ55_RS09970 dfd748da0b41f74e412fa5c6a3db8d64 319 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 314 1.8E-58 T 06-07-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 Pfam PF01479 S4 domain 8 52 1.3E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 SMART SM00363 7 63 7.8E-13 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.5E-53 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 SUPERFAMILY SSF55120 69 229 6.72E-38 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 SUPERFAMILY SSF55174 8 62 1.03E-12 T 06-07-2017 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 Pfam PF00849 RNA pseudouridylate synthase 69 195 3.7E-13 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 Gene3D G3DSA:3.10.290.10 6 60 1.1E-18 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 LFZ55_RS22610 002b8dd343fafef6b6dd086478f162a4 289 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 7.1E-26 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.9E-33 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 67 2.7E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS10345 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Gene3D G3DSA:1.10.530.10 100 260 9.9E-47 T 06-07-2017 LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Pfam PF01464 Transglycosylase SLT domain 105 217 9.7E-29 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 SUPERFAMILY SSF54106 403 446 7.19E-11 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 SUPERFAMILY SSF54106 344 387 6.93E-11 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 SUPERFAMILY SSF53955 102 252 8.84E-42 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Gene3D G3DSA:3.10.350.10 402 446 5.9E-18 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Gene3D G3DSA:3.10.350.10 343 387 1.2E-18 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Pfam PF01476 LysM domain 405 444 9.2E-10 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 Pfam PF01476 LysM domain 346 387 1.5E-13 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 SMART SM00257 404 446 3.8E-13 T 06-07-2017 IPR018392 LysM domain LFZ55_RS19100 22e32fc8b55cdd25df4d49e8a42d1a18 455 SMART SM00257 345 388 2.8E-15 T 06-07-2017 IPR018392 LysM domain LFZ55_RS16045 f7727036cb9764b2c7c40f01495e1049 281 SUPERFAMILY SSF161098 8 266 4.21E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16045 f7727036cb9764b2c7c40f01495e1049 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 273 1.7E-13 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16045 f7727036cb9764b2c7c40f01495e1049 281 Gene3D G3DSA:1.10.3720.10 11 270 4.2E-57 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS15985 6b752f577bac439a017b5264bcef821f 107 Gene3D G3DSA:3.30.110.70 1 104 5.0E-39 T 06-07-2017 IPR002765 Uncharacterised protein family UPF0145 LFZ55_RS15985 6b752f577bac439a017b5264bcef821f 107 SUPERFAMILY SSF117782 1 106 3.14E-38 T 06-07-2017 IPR002765 Uncharacterised protein family UPF0145 LFZ55_RS15985 6b752f577bac439a017b5264bcef821f 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.808 T 06-07-2017 IPR002765 Uncharacterised protein family UPF0145 LFZ55_RS15985 6b752f577bac439a017b5264bcef821f 107 Pfam PF01906 Putative heavy-metal-binding 1 104 1.8E-40 T 06-07-2017 IPR002765 Uncharacterised protein family UPF0145 LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 SMART SM00052 487 729 7.8E-85 T 06-07-2017 IPR001633 EAL domain LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 Pfam PF05231 MASE1 15 315 5.6E-64 T 06-07-2017 IPR007895 MASE1 LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 Pfam PF00990 Diguanylate cyclase, GGDEF domain 326 443 1.5E-4 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 Pfam PF00563 EAL domain 493 724 1.0E-57 T 06-07-2017 IPR001633 EAL domain LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 SUPERFAMILY SSF141868 493 727 1.15E-66 T 06-07-2017 IPR001633 EAL domain LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 SUPERFAMILY SSF55073 331 444 1.41E-5 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 SMART SM00267 315 473 2.0E-16 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS07165 94d50e7705fe82239ba1fc15e1470929 729 Gene3D G3DSA:3.20.20.450 493 727 2.4E-63 T 06-07-2017 IPR001633 EAL domain LFZ55_RS21535 959c51d5a5bc40b8567cd51dbc55b577 282 Gene3D G3DSA:3.40.50.720 2 217 3.8E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21535 959c51d5a5bc40b8567cd51dbc55b577 282 Pfam PF05368 NmrA-like family 2 220 7.8E-23 T 06-07-2017 IPR008030 NmrA-like domain Reactome: R-HSA-70635 LFZ55_RS21535 959c51d5a5bc40b8567cd51dbc55b577 282 SUPERFAMILY SSF51735 2 252 3.57E-60 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 PRINTS PR00069 Aldo-keto reductase signature 35 59 3.5E-39 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 PRINTS PR00069 Aldo-keto reductase signature 198 222 3.5E-39 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 PRINTS PR00069 Aldo-keto reductase signature 159 188 3.5E-39 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 PRINTS PR00069 Aldo-keto reductase signature 96 114 3.5E-39 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 PRINTS PR00069 Aldo-keto reductase signature 125 142 3.5E-39 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 SUPERFAMILY SSF51430 6 265 1.13E-81 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 Gene3D G3DSA:3.20.20.100 5 266 8.4E-90 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LFZ55_RS11525 ecbff399f067e481904d9f2f4d849782 289 Pfam PF00248 Aldo/keto reductase family 22 262 3.2E-40 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS16360 abe7cacd92b43bbea69344d7b2173c5c 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.1E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16360 abe7cacd92b43bbea69344d7b2173c5c 303 Gene3D G3DSA:1.10.3720.10 93 299 4.6E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16360 abe7cacd92b43bbea69344d7b2173c5c 303 SUPERFAMILY SSF161098 96 283 2.88E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16360 abe7cacd92b43bbea69344d7b2173c5c 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 7.8E-14 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LFZ55_RS08655 288351e77b81c32355d7ee301cac4484 193 Pfam PF00692 dUTPase 79 185 3.5E-8 T 06-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LFZ55_RS08655 288351e77b81c32355d7ee301cac4484 193 SUPERFAMILY SSF51283 1 193 1.13E-59 T 06-07-2017 IPR029054 dUTPase-like LFZ55_RS08655 288351e77b81c32355d7ee301cac4484 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 4.1E-67 T 06-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 LFZ55_RS08655 288351e77b81c32355d7ee301cac4484 193 Gene3D G3DSA:2.70.40.10 1 192 2.0E-59 T 06-07-2017 IPR029054 dUTPase-like LFZ55_RS08655 288351e77b81c32355d7ee301cac4484 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 33.623 T 06-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 LFZ55_RS00510 dd085b7329e3faac619b1f098526dbee 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.1E-199 T 06-07-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 LFZ55_RS00510 dd085b7329e3faac619b1f098526dbee 401 Pfam PF03616 Sodium/glutamate symporter 3 366 2.5E-162 T 06-07-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 LFZ55_RS15585 71f42e53f01d1562b410387cc44ad3f0 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 8.2E-188 T 06-07-2017 IPR005219 Conserved hypothetical protein CHP00155 LFZ55_RS15585 71f42e53f01d1562b410387cc44ad3f0 417 Pfam PF04403 Paraquat-inducible protein A 253 408 5.7E-54 T 06-07-2017 IPR007498 Paraquat-inducible protein A LFZ55_RS15585 71f42e53f01d1562b410387cc44ad3f0 417 Pfam PF04403 Paraquat-inducible protein A 49 200 9.4E-39 T 06-07-2017 IPR007498 Paraquat-inducible protein A LFZ55_RS08025 2f8acbac7419945233637efb1e11e0b9 959 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 603 683 5.3E-24 T 06-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 06-07-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 06-07-2017 IPR018120 Glycoside hydrolase family 1, active site LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 SUPERFAMILY SSF51445 2 472 3.2E-161 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 Gene3D G3DSA:3.20.20.80 3 477 6.1E-145 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 Pfam PF00232 Glycosyl hydrolase family 1 4 476 7.7E-128 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 2.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 2.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 2.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 2.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS17705 367402295b621437f317e1db9876ad74 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 2.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS13570 e5d55ff0ef076094620e1f3dc440dfb5 199 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 5 166 7.9E-34 T 06-07-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LFZ55_RS13570 e5d55ff0ef076094620e1f3dc440dfb5 199 PIRSF PIRSF030780 1 199 5.7E-128 T 06-07-2017 IPR016956 Inner membrane protein YdjM LFZ55_RS15665 458f2a86e98a5a982ae9473527246f21 235 Pfam PF04288 MukE-like family 10 230 4.3E-126 T 06-07-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 LFZ55_RS15665 458f2a86e98a5a982ae9473527246f21 235 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 235 48.767 T 06-07-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 LFZ55_RS00395 6506410796354fb398957cc63cf5d82e 240 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 30 176 5.3E-27 T 06-07-2017 IPR013467 Conserved hypothetical protein CHP02646 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:1.10.3500.10 451 498 4.3E-105 T 06-07-2017 IPR023323 Tex-like domain LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:1.10.3500.10 111 323 4.3E-105 T 06-07-2017 IPR023323 Tex-like domain LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.4E-28 T 06-07-2017 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SMART SM00732 327 424 3.4E-35 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SUPERFAMILY SSF158832 2 322 3.27E-120 T 06-07-2017 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:1.10.150.310 499 630 6.9E-48 T 06-07-2017 IPR023097 Tex RuvX-like domain LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Pfam PF09371 Tex-like protein N-terminal domain 10 193 4.3E-69 T 06-07-2017 IPR018974 Tex-like protein, N-terminal LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:2.40.50.140 634 720 1.6E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SUPERFAMILY SSF53098 323 469 4.8E-49 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SUPERFAMILY SSF50249 638 723 3.0E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Pfam PF16921 Tex protein YqgF-like domain 328 451 2.6E-50 T 06-07-2017 IPR032639 Tex protein, YqgF-like domain LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:3.30.420.140 328 450 3.2E-49 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SUPERFAMILY SSF47781 470 558 5.0E-28 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SMART SM00316 649 720 3.9E-25 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Gene3D G3DSA:1.10.10.650 2 110 2.7E-45 T 06-07-2017 IPR023319 Tex-like protein, HTH domain LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 SUPERFAMILY SSF47781 560 632 8.0E-20 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS01665 18b3fd1423efeb273509f3f0f37cbf14 776 Pfam PF00575 S1 RNA binding domain 651 720 8.8E-23 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS15110 837ce73ed7cb4984fccfb7528c189eb8 848 Pfam PF13953 PapC C-terminal domain 761 823 4.5E-16 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS15110 837ce73ed7cb4984fccfb7528c189eb8 848 Pfam PF00577 Outer membrane usher protein 200 751 1.3E-148 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS15110 837ce73ed7cb4984fccfb7528c189eb8 848 Pfam PF13954 PapC N-terminal domain 39 184 2.2E-41 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS15110 837ce73ed7cb4984fccfb7528c189eb8 848 SUPERFAMILY SSF141729 62 176 3.27E-29 T 06-07-2017 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 Pfam PF01371 Trp repressor protein 17 102 3.9E-28 T 06-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.982 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 Gene3D G3DSA:1.10.1270.10 10 107 2.9E-46 T 06-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 SUPERFAMILY SSF48295 5 105 3.92E-29 T 06-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 PIRSF PIRSF003196 1 108 9.4E-40 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-39 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 LFZ55_RS20385 38cbb0cd840f1ec794583177ac7bdd81 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 1.1E-38 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Gene3D G3DSA:3.40.50.300 141 283 7.1E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Pfam PF00072 Response regulator receiver domain 8 116 1.7E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 SUPERFAMILY SSF52172 6 185 1.34E-36 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Gene3D G3DSA:1.10.10.60 355 408 7.5E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Pfam PF02954 Bacterial regulatory protein, Fis family 366 406 6.1E-10 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Gene3D G3DSA:3.40.50.2300 6 128 5.5E-29 T 06-07-2017 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Gene3D G3DSA:1.10.8.60 285 341 3.0E-14 T 06-07-2017 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 SMART SM00448 6 117 3.9E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 325 334 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 Pfam PF14532 Sigma-54 interaction domain 143 278 6.1E-18 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 SUPERFAMILY SSF46689 358 409 3.08E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07280 11804323514409f9470d0a3ad364969b 415 SUPERFAMILY SSF52540 141 350 5.5E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19890 d84083243184efffcda134c258417c50 500 SUPERFAMILY SSF50443 329 498 6.28E-71 T 06-07-2017 IPR004216 L-fucose/L-arabinose isomerase, C-terminal LFZ55_RS19890 d84083243184efffcda134c258417c50 500 SUPERFAMILY SSF53743 1 326 8.89E-124 T 06-07-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 LFZ55_RS19890 d84083243184efffcda134c258417c50 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.811 T 06-07-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 LFZ55_RS19890 d84083243184efffcda134c258417c50 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 7.7E-46 T 06-07-2017 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 LFZ55_RS19890 d84083243184efffcda134c258417c50 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 8.0E-180 T 06-07-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 LFZ55_RS19890 d84083243184efffcda134c258417c50 500 Pfam PF02610 L-arabinose isomerase 5 359 6.7E-179 T 06-07-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 LFZ55_RS19890 d84083243184efffcda134c258417c50 500 PIRSF PIRSF001478 1 500 5.8E-258 T 06-07-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 SMART SM00448 4 120 3.8E-15 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-18 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 SUPERFAMILY SSF46894 146 207 2.24E-16 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 Gene3D G3DSA:1.10.10.10 126 207 4.3E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 Gene3D G3DSA:3.40.50.2300 1 125 8.3E-21 T 06-07-2017 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 SMART SM00421 148 205 4.2E-16 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.546 T 06-07-2017 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 LFZ55_RS07875 66260ac03a5f7d69b09dabadc70a7d44 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 41.929 T 06-07-2017 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 Pfam PF01435 Peptidase family M48 74 259 2.0E-25 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 SUPERFAMILY SSF48452 308 428 9.49E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 Gene3D G3DSA:3.30.2010.10 69 150 9.8E-16 T 06-07-2017 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 Pfam PF14559 Tetratricopeptide repeat 354 418 3.6E-9 T 06-07-2017 LFZ55_RS06755 9dd0213ef47c2b41d4d6a8c12bd561d8 487 Gene3D G3DSA:1.25.40.10 310 455 9.0E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 Pfam PF01380 SIS domain 117 208 2.1E-12 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 06-07-2017 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 Gene3D G3DSA:3.40.50.10490 4 248 1.0E-90 T 06-07-2017 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 1.3E-123 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 42.947 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 LFZ55_RS06030 2de0419e176905a7bd2b7f98022f766f 297 SUPERFAMILY SSF53697 4 248 1.05E-74 T 06-07-2017 LFZ55_RS00230 c487ca15b5d8aa7f76276d801a882e03 388 Pfam PF12323 Helix-turn-helix domain 1 45 1.2E-21 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain LFZ55_RS00230 c487ca15b5d8aa7f76276d801a882e03 388 Pfam PF01385 Probable transposase 169 273 6.6E-21 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LFZ55_RS00230 c487ca15b5d8aa7f76276d801a882e03 388 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 242 311 3.5E-9 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal LFZ55_RS00230 c487ca15b5d8aa7f76276d801a882e03 388 Pfam PF07282 Putative transposase DNA-binding domain 287 355 4.8E-23 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal LFZ55_RS04790 f44621a924041886f39bdefb7878fbe0 118 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 17 118 2.0E-47 T 06-07-2017 IPR022721 Protein of unknown function DUF3561 LFZ55_RS04790 f44621a924041886f39bdefb7878fbe0 118 Pfam PF12084 Protein of unknown function (DUF3561) 12 118 1.2E-45 T 06-07-2017 IPR022721 Protein of unknown function DUF3561 LFZ55_RS16600 04da5da72b547f15d11cb8bcf01800cd 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.745 T 06-07-2017 IPR010119 Gluconeogenesis factor LFZ55_RS16600 04da5da72b547f15d11cb8bcf01800cd 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 1.4E-76 T 06-07-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LFZ55_RS16600 04da5da72b547f15d11cb8bcf01800cd 302 Gene3D G3DSA:3.40.50.10680 82 299 2.6E-51 T 06-07-2017 LFZ55_RS16600 04da5da72b547f15d11cb8bcf01800cd 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 260 5.2E-101 T 06-07-2017 IPR010119 Gluconeogenesis factor LFZ55_RS16600 04da5da72b547f15d11cb8bcf01800cd 302 SUPERFAMILY SSF142338 11 295 3.92E-86 T 06-07-2017 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 Gene3D G3DSA:3.30.565.10 305 449 5.9E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 SUPERFAMILY SSF47384 219 303 2.35E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 449 4.9E-102 T 06-07-2017 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 437 3.5E-13 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 SMART SM00387 345 452 7.0E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 SMART SM00304 182 235 0.0027 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 Gene3D G3DSA:1.10.287.130 228 298 4.3E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 SUPERFAMILY SSF55874 291 449 3.14E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 SMART SM00388 236 302 6.4E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 Pfam PF00672 HAMP domain 163 231 4.9E-10 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS15035 f9e4d809027a88be1a938b36b227a5be 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 1.4E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS23720 0a9ee1876ff67a2807bf54c720cc9a2d 848 PIRSF PIRSF001444 1 847 0.0 T 06-07-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 LFZ55_RS23720 0a9ee1876ff67a2807bf54c720cc9a2d 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 06-07-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 LFZ55_RS23720 0a9ee1876ff67a2807bf54c720cc9a2d 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 5.0E-257 T 06-07-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 LFZ55_RS23720 0a9ee1876ff67a2807bf54c720cc9a2d 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 06-07-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 LFZ55_RS23720 0a9ee1876ff67a2807bf54c720cc9a2d 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 8.9E-81 T 06-07-2017 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 LFZ55_RS23075 479df5ee2cece0f042fcc465d91a6063 309 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 20.967 T 06-07-2017 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 LFZ55_RS23075 479df5ee2cece0f042fcc465d91a6063 309 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 3.5E-148 T 06-07-2017 LFZ55_RS23075 479df5ee2cece0f042fcc465d91a6063 309 PIRSF PIRSF005355 1 307 1.4E-99 T 06-07-2017 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 LFZ55_RS23075 479df5ee2cece0f042fcc465d91a6063 309 Pfam PF01040 UbiA prenyltransferase family 27 279 6.9E-39 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LFZ55_RS10255 e670837d119b22cf80f1f42388647ae2 216 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 06-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 LFZ55_RS10255 e670837d119b22cf80f1f42388647ae2 216 Pfam PF00149 Calcineurin-like phosphoesterase 18 148 1.3E-13 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS10255 e670837d119b22cf80f1f42388647ae2 216 Gene3D G3DSA:3.60.21.10 10 215 1.1E-46 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS10255 e670837d119b22cf80f1f42388647ae2 216 SUPERFAMILY SSF56300 17 214 3.95E-46 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS02585 6cf59a8b7bc1cdc33970ab64db4340c9 217 Gene3D G3DSA:3.40.50.880 1 216 3.7E-100 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS02585 6cf59a8b7bc1cdc33970ab64db4340c9 217 SUPERFAMILY SSF52317 1 216 1.69E-65 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS02585 6cf59a8b7bc1cdc33970ab64db4340c9 217 PIRSF PIRSF006320 1 216 8.7E-105 T 06-07-2017 IPR026041 Glyoxalase ElbB LFZ55_RS23240 122aad503b801212a05bd3e999c6009b 148 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 4 130 7.0E-43 T 06-07-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 LFZ55_RS23240 122aad503b801212a05bd3e999c6009b 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 144 5.2E-31 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS23240 122aad503b801212a05bd3e999c6009b 148 Gene3D G3DSA:3.40.930.10 4 144 3.5E-36 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS23240 122aad503b801212a05bd3e999c6009b 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS23240 122aad503b801212a05bd3e999c6009b 148 SUPERFAMILY SSF55804 3 144 8.89E-31 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS21835 3074b6e44b4a34268a3d72a2b2a16682 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 8.7E-33 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 LFZ55_RS21835 3074b6e44b4a34268a3d72a2b2a16682 105 SUPERFAMILY SSF103481 5 103 1.44E-21 T 06-07-2017 LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 SMART SM00829 11 325 1.2E-26 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 06-07-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 2.3E-9 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 SUPERFAMILY SSF51735 113 275 3.86E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 Gene3D G3DSA:3.90.180.10 5 146 8.6E-44 T 06-07-2017 IPR011032 GroES-like LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 1.7E-29 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 Gene3D G3DSA:3.40.50.720 147 256 7.7E-29 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22460 af9923a4268ab5bff79b3024d82e6480 327 SUPERFAMILY SSF50129 8 142 1.56E-33 T 06-07-2017 IPR011032 GroES-like LFZ55_RS08510 64082c6205421be5974a6b94842d960d 178 Pfam PF00419 Fimbrial protein 32 175 5.7E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS08510 64082c6205421be5974a6b94842d960d 178 SUPERFAMILY SSF49401 40 175 7.95E-14 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS08510 64082c6205421be5974a6b94842d960d 178 Gene3D G3DSA:2.60.40.1090 39 175 7.9E-18 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.412 T 06-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.0E-26 T 06-07-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.197 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 SMART SM00663 235 514 1.1E-184 T 06-07-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 4.4E-77 T 06-07-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Gene3D G3DSA:2.40.50.100 1156 1211 4.4E-6 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.2E-89 T 06-07-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 06-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 06-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 06-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 SUPERFAMILY SSF64484 16 944 0.0 T 06-07-2017 LFZ55_RS22790 7e5be053dd8290473908cd49e190beb7 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.7E-18 T 06-07-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LFZ55_RS21095 b7d0c9683715f0c7468075007b62d158 303 PIRSF PIRSF037112 1 301 4.1E-109 T 06-07-2017 IPR017113 Antirestriction, ArdC LFZ55_RS21095 b7d0c9683715f0c7468075007b62d158 303 Pfam PF08401 Domain of unknown function (DUF1738) 6 130 9.0E-35 T 06-07-2017 IPR013610 Domain of unknown function DUF1738 LFZ55_RS22930 49432354281de70aa8ba81864c4766d1 211 Gene3D G3DSA:1.10.357.10 3 194 2.2E-35 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS22930 49432354281de70aa8ba81864c4766d1 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.3E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS22930 49432354281de70aa8ba81864c4766d1 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 211 57.706 T 06-07-2017 IPR023764 Transcriptional repressor HTH, FabR LFZ55_RS22930 49432354281de70aa8ba81864c4766d1 211 SUPERFAMILY SSF46689 2 78 5.67E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 SUPERFAMILY SSF52172 3 130 5.69E-29 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 SMART SM00448 4 117 4.9E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.9E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.9E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.9E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 Pfam PF00072 Response regulator receiver domain 6 117 6.8E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 Gene3D G3DSA:1.10.10.10 154 211 4.2E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 SMART SM00421 147 204 2.9E-21 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.2E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 Gene3D G3DSA:3.40.50.2300 1 153 3.8E-31 T 06-07-2017 LFZ55_RS13270 78093e1034620d4d92096493fcd8fd60 212 SUPERFAMILY SSF46894 143 210 7.48E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS21225 4b09bd37731ccead568e0a7acfb75bba 160 Gene3D G3DSA:3.40.50.10110 14 157 5.3E-53 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LFZ55_RS21225 4b09bd37731ccead568e0a7acfb75bba 160 SUPERFAMILY SSF102400 14 158 1.57E-47 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LFZ55_RS21225 4b09bd37731ccead568e0a7acfb75bba 160 Pfam PF04364 DNA polymerase III chi subunit, HolC 14 154 1.0E-38 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 SUPERFAMILY SSF118215 29 443 2.35E-97 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 Gene3D G3DSA:1.10.3860.10 23 449 1.1E-102 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.2E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS13575 2ccea427cccec00a35d0a3c6a0ab250d 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 3.5E-103 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS09345 d55f0fd382773b065511c31d33d68cb8 313 SUPERFAMILY SSF51569 5 245 1.37E-52 T 06-07-2017 LFZ55_RS09345 d55f0fd382773b065511c31d33d68cb8 313 Pfam PF00682 HMGL-like 5 238 2.7E-38 T 06-07-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 LFZ55_RS09345 d55f0fd382773b065511c31d33d68cb8 313 Gene3D G3DSA:3.20.20.70 5 258 1.4E-47 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 78.12 T 06-07-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 373 2.9E-16 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 Gene3D G3DSA:3.40.50.150 180 373 1.4E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 SUPERFAMILY SSF53335 3 372 7.28E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site LFZ55_RS16035 b958b0f3f0052d6b9c6439379c74ec6d 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 9.3E-210 T 06-07-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 LFZ55_RS24410 bdbf1611c314e8c8c7382155d15a54aa 226 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 51 223 3.4E-30 T 06-07-2017 IPR021055 Type-IV b secretion system, inner-membrane complex component LFZ55_RS11905 d690c9a92e21011fcb6b4f594320f36f 93 SUPERFAMILY SSF52794 2 90 6.8E-19 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS11905 d690c9a92e21011fcb6b4f594320f36f 93 Gene3D G3DSA:3.40.50.270 2 91 7.3E-30 T 06-07-2017 LFZ55_RS11905 d690c9a92e21011fcb6b4f594320f36f 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 60 2.9E-12 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 177 185 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 45 53 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 Gene3D G3DSA:2.40.160.20 28 185 1.7E-40 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 Pfam PF06316 Enterobacterial Ail/Lom protein 5 185 2.4E-26 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 44 56 4.9E-31 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 173 184 4.9E-31 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 146 167 4.9E-31 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 92 115 4.9E-31 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS14005 81b99b15314419a7d1c037cc2a293f11 185 SUPERFAMILY SSF56925 29 185 1.28E-26 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 06-07-2017 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 PIRSF PIRSF001363 2 533 2.3E-249 T 06-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 Gene3D G3DSA:1.20.1220.12 414 526 1.3E-37 T 06-07-2017 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 Gene3D G3DSA:3.20.20.360 73 413 4.0E-122 T 06-07-2017 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 SUPERFAMILY SSF51645 12 532 1.31E-186 T 06-07-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 6.2E-250 T 06-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS22665 f8254ff6b92ec51763c3e17dea2795bb 533 Pfam PF01274 Malate synthase 13 532 6.6E-209 T 06-07-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.0E-76 T 06-07-2017 IPR010650 PrkA C-terminal domain LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 Pfam PF08298 PrkA AAA domain 20 380 5.4E-180 T 06-07-2017 IPR013153 PrkA AAA domain LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 SMART SM00763 19 380 1.6E-218 T 06-07-2017 IPR013153 PrkA AAA domain LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 PIRSF PIRSF000549 1 644 1.8E-293 T 06-07-2017 IPR016230 Serine-protein kinase, PrkA GO:0004672 LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 Gene3D G3DSA:3.40.50.300 243 329 4.4E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 Gene3D G3DSA:3.40.50.300 75 174 4.4E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 SUPERFAMILY SSF52540 75 145 2.17E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13780 f3d3dd4ef7383f3d2c368bf8c6a2e469 644 SUPERFAMILY SSF52540 241 366 2.17E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21115 f75daad6f60646a5c3febe9d69aa0b95 81 Gene3D G3DSA:1.10.260.40 3 70 2.2E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21115 f75daad6f60646a5c3febe9d69aa0b95 81 SUPERFAMILY SSF47413 5 70 1.9E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS21115 f75daad6f60646a5c3febe9d69aa0b95 81 Pfam PF01381 Helix-turn-helix 16 66 9.1E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS21115 f75daad6f60646a5c3febe9d69aa0b95 81 SMART SM00530 15 70 5.4E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 PIRSF PIRSF005902 1 260 5.4E-77 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 Pfam PF01026 TatD related DNase 2 256 3.1E-70 T 06-07-2017 IPR001130 TatD family GO:0016788 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 Gene3D G3DSA:3.20.20.140 1 257 1.5E-85 T 06-07-2017 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 SUPERFAMILY SSF51556 1 257 5.06E-86 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LFZ55_RS23560 792487f015773f37595c74b25509a07b 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 63.666 T 06-07-2017 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 Gene3D G3DSA:3.40.190.10 91 175 2.6E-10 T 06-07-2017 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 SUPERFAMILY SSF46785 1 86 6.48E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 Gene3D G3DSA:3.40.190.10 176 260 8.9E-23 T 06-07-2017 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 Gene3D G3DSA:1.10.10.10 1 86 4.6E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 SUPERFAMILY SSF53850 90 289 5.18E-39 T 06-07-2017 LFZ55_RS22320 0c4797a79634c4774adbac4039a5eb8a 294 Pfam PF03466 LysR substrate binding domain 89 287 1.3E-39 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS20095 ae0956d15fd83c055eb246611549e931 149 SUPERFAMILY SSF54534 5 143 9.82E-36 T 06-07-2017 LFZ55_RS20095 ae0956d15fd83c055eb246611549e931 149 Gene3D G3DSA:3.10.50.40 3 80 7.0E-19 T 06-07-2017 LFZ55_RS20095 ae0956d15fd83c055eb246611549e931 149 Gene3D G3DSA:3.10.50.40 130 145 7.0E-19 T 06-07-2017 LFZ55_RS20095 ae0956d15fd83c055eb246611549e931 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 1.9E-14 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LFZ55_RS01040 8374980a7eb7d7888a795562feb96e65 339 Gene3D G3DSA:1.10.3720.10 87 162 2.9E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01040 8374980a7eb7d7888a795562feb96e65 339 Gene3D G3DSA:1.10.3720.10 203 332 2.9E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01040 8374980a7eb7d7888a795562feb96e65 339 SUPERFAMILY SSF161098 89 160 2.62E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01040 8374980a7eb7d7888a795562feb96e65 339 SUPERFAMILY SSF161098 200 322 2.62E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01040 8374980a7eb7d7888a795562feb96e65 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 9.6E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS02630 12622a97b577b7f12af865bb7163a3dd 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 26.798 T 06-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LFZ55_RS02630 12622a97b577b7f12af865bb7163a3dd 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 6.6E-52 T 06-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LFZ55_RS02630 12622a97b577b7f12af865bb7163a3dd 184 Gene3D G3DSA:2.60.450.10 29 163 5.5E-43 T 06-07-2017 LFZ55_RS02630 12622a97b577b7f12af865bb7163a3dd 184 Pfam PF03968 OstA-like protein 37 149 9.4E-32 T 06-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal LFZ55_RS20330 4e3dc120e2c0ea1170d8492b3e5feb6f 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 225 2.8E-74 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS20330 4e3dc120e2c0ea1170d8492b3e5feb6f 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 1.5E-32 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS20330 4e3dc120e2c0ea1170d8492b3e5feb6f 228 Gene3D G3DSA:3.40.1280.10 2 156 3.7E-28 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS20330 4e3dc120e2c0ea1170d8492b3e5feb6f 228 SUPERFAMILY SSF75217 2 156 1.18E-30 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS20330 4e3dc120e2c0ea1170d8492b3e5feb6f 228 PIRSF PIRSF004808 1 228 9.3E-61 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS21480 1493f987b05dc0374cbea5f002b273d6 114 Gene3D G3DSA:3.10.490.10 1 112 4.7E-40 T 06-07-2017 IPR013024 Butirosin biosynthesis, BtrG-like LFZ55_RS21480 1493f987b05dc0374cbea5f002b273d6 114 SUPERFAMILY SSF110857 1 111 6.02E-35 T 06-07-2017 IPR013024 Butirosin biosynthesis, BtrG-like LFZ55_RS21480 1493f987b05dc0374cbea5f002b273d6 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 4.7E-25 T 06-07-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 06-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 SUPERFAMILY SSF55205 1 423 8.5E-145 T 06-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 Gene3D G3DSA:3.65.10.10 238 423 2.7E-74 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 Gene3D G3DSA:3.65.10.10 22 237 1.1E-66 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.1E-154 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 PIRSF PIRSF000505 1 427 1.8E-155 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 5.0E-141 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 06-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 LFZ55_RS15740 297cf332bf6b730ad06ad5fdaea577cf 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.321 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 LFZ55_RS03340 76d26b0c842f2c983d53a44d722197a7 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.6E-72 T 06-07-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LFZ55_RS03340 76d26b0c842f2c983d53a44d722197a7 193 SUPERFAMILY SSF53474 3 188 1.52E-19 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS03340 76d26b0c842f2c983d53a44d722197a7 193 Gene3D G3DSA:3.40.50.1820 3 185 2.3E-18 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS22605 1273a190876443b9fe2c48141bc5679c 90 Pfam PF11656 YjbD family (DUF3811) 3 90 4.0E-38 T 06-07-2017 IPR020317 Uncharacterised protein family YjbD LFZ55_RS22605 1273a190876443b9fe2c48141bc5679c 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 8.0E-34 T 06-07-2017 IPR020317 Uncharacterised protein family YjbD LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 4 405 1.3E-65 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 Gene3D G3DSA:2.40.50.100 32 68 4.3E-8 T 06-07-2017 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 Gene3D G3DSA:2.40.50.100 249 289 4.3E-8 T 06-07-2017 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 405 2.4E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 385 2.4E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 6 29 2.4E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 271 292 2.4E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 68 2.4E-21 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS21430 5cd2bf519d62fee11be3142aba1f34b6 412 Pfam PF13437 HlyD family secretion protein 257 373 2.4E-12 T 06-07-2017 LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 SUPERFAMILY SSF51735 2 238 1.72E-55 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 Gene3D G3DSA:3.40.50.720 2 253 8.2E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0052 T 06-07-2017 LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.0E-18 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-18 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.0E-18 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.0E-18 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.0E-18 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS17920 72c90b2eb7d3bfe0e7de9b23e3836209 256 Pfam PF00106 short chain dehydrogenase 3 191 1.3E-38 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS13275 d0200e141deabac019b838e9246cdfd4 242 Pfam PF13411 MerR HTH family regulatory protein 3 70 7.7E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13275 d0200e141deabac019b838e9246cdfd4 242 Gene3D G3DSA:1.10.1660.10 3 108 3.5E-20 T 06-07-2017 LFZ55_RS13275 d0200e141deabac019b838e9246cdfd4 242 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 29 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13275 d0200e141deabac019b838e9246cdfd4 242 SMART SM00422 3 72 2.7E-26 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13275 d0200e141deabac019b838e9246cdfd4 242 SUPERFAMILY SSF46955 3 92 7.78E-20 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 Gene3D G3DSA:3.20.20.70 11 355 2.9E-123 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 PIRSF PIRSF001359 13 359 7.8E-107 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.6E-117 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 4.3E-88 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 8.9E-193 T 06-07-2017 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 LFZ55_RS03985 9092e996b8667a56ef6e5a0771dc439e 359 SUPERFAMILY SSF51569 4 357 2.38E-131 T 06-07-2017 LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 9.4E-159 T 06-07-2017 IPR022462 Lysine-2,3-aminomutase-like LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 Pfam PF13353 4Fe-4S single cluster domain 111 182 3.7E-6 T 06-07-2017 LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.2E-146 T 06-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 PIRSF PIRSF004911 1 342 5.4E-121 T 06-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 Pfam PF04055 Radical SAM superfamily 118 268 3.8E-9 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 Gene3D G3DSA:3.20.20.70 105 319 8.7E-18 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS21860 d0803aada0ffef790f260ddc26913f51 342 SUPERFAMILY SSF102114 102 324 8.37E-26 T 06-07-2017 LFZ55_RS16345 7ca2aca57efe6787f90003ab6f8f7360 377 Gene3D G3DSA:2.120.10.30 19 374 1.7E-103 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like LFZ55_RS16345 7ca2aca57efe6787f90003ab6f8f7360 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 1.3E-129 T 06-07-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LFZ55_RS16345 7ca2aca57efe6787f90003ab6f8f7360 377 SUPERFAMILY SSF50952 19 370 9.42E-45 T 06-07-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 SUPERFAMILY SSF52833 1 78 1.21E-19 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 SUPERFAMILY SSF47616 81 216 8.87E-23 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 138 205 2.5E-7 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 Gene3D G3DSA:1.20.1050.10 90 210 1.1E-21 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 Gene3D G3DSA:3.40.30.10 2 89 3.0E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS22340 72c1fa9d1e661dd69826930210cb1c9b 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 8.3E-18 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 Pfam PF03958 Bacterial type II/III secretion system short domain 178 267 2.8E-15 T 06-07-2017 IPR005644 NolW-like LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 436 469 - T 06-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 Pfam PF00263 Bacterial type II and III secretion system protein 331 490 1.9E-33 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 30 491 6.8E-147 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 344 363 2.7E-39 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 469 488 2.7E-39 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 378 393 2.7E-39 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 189 206 2.7E-39 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS13255 29c4e4eb4c838675116b9b40b5b1e94c 497 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 270 290 2.7E-39 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS14775 ab0b12df2cf80ec405cf25f20e5f20e7 238 SUPERFAMILY SSF56214 126 210 1.92E-6 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS14775 ab0b12df2cf80ec405cf25f20e5f20e7 238 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 6.3E-11 T 06-07-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 LFZ55_RS14775 ab0b12df2cf80ec405cf25f20e5f20e7 238 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 6.3E-11 T 06-07-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 LFZ55_RS14775 ab0b12df2cf80ec405cf25f20e5f20e7 238 PRINTS PR01399 Enterobactin synthetase component D signature 166 182 6.3E-11 T 06-07-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 LFZ55_RS14775 ab0b12df2cf80ec405cf25f20e5f20e7 238 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 126 229 7.3E-9 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS19190 ad67b27e9aab94500b070d8ca366a3f6 140 Gene3D G3DSA:3.30.160.200 2 107 4.2E-34 T 06-07-2017 LFZ55_RS19190 ad67b27e9aab94500b070d8ca366a3f6 140 Pfam PF00472 RF-1 domain 6 132 1.1E-27 T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LFZ55_RS19190 ad67b27e9aab94500b070d8ca366a3f6 140 SUPERFAMILY SSF75620 7 113 6.67E-15 T 06-07-2017 LFZ55_RS19190 ad67b27e9aab94500b070d8ca366a3f6 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LFZ55_RS03310 05c05005091b91e5f0c26e65e291d60f 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 37.102 T 06-07-2017 IPR009576 Biofilm formation YgiB LFZ55_RS03310 05c05005091b91e5f0c26e65e291d60f 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 4.9E-57 T 06-07-2017 IPR009576 Biofilm formation YgiB LFZ55_RS14030 a5c5be0042df0d65e96c96eef4bd6822 79 Pfam PF06183 DinI-like family 17 76 1.1E-22 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS14030 a5c5be0042df0d65e96c96eef4bd6822 79 SUPERFAMILY SSF54857 1 78 2.62E-24 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS14030 a5c5be0042df0d65e96c96eef4bd6822 79 Gene3D G3DSA:3.30.910.10 1 78 4.3E-26 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS13055 12a4e6c346916e763e3a2878faea5e1c 274 SUPERFAMILY SSF54001 136 268 5.56E-41 T 06-07-2017 LFZ55_RS13055 12a4e6c346916e763e3a2878faea5e1c 274 Gene3D G3DSA:3.90.1720.10 136 269 5.4E-47 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS13055 12a4e6c346916e763e3a2878faea5e1c 274 Pfam PF00877 NlpC/P60 family 156 266 1.0E-32 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS14145 def989c0300e219001b1395e4d029aec 285 SUPERFAMILY SSF161098 6 274 1.31E-52 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS14145 def989c0300e219001b1395e4d029aec 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 4.0E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS14145 def989c0300e219001b1395e4d029aec 285 Gene3D G3DSA:1.10.3720.10 3 273 6.7E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08965 8d1217a9650c22a183032470e34607cb 146 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 141 2.7E-56 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS08965 8d1217a9650c22a183032470e34607cb 146 Gene3D G3DSA:3.40.50.300 3 140 1.6E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08965 8d1217a9650c22a183032470e34607cb 146 SUPERFAMILY SSF52540 2 139 2.16E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08965 8d1217a9650c22a183032470e34607cb 146 PIRSF PIRSF036409 1 146 1.2E-54 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS08965 8d1217a9650c22a183032470e34607cb 146 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 141 2.1E-54 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Gene3D G3DSA:3.30.499.10 2 158 2.8E-23 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 SUPERFAMILY SSF53732 2 464 1.83E-167 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Gene3D G3DSA:3.40.1060.10 166 279 1.9E-39 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 2.7E-276 T 06-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Gene3D G3DSA:3.30.499.10 335 465 2.8E-63 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Gene3D G3DSA:3.30.499.10 293 303 2.8E-63 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.163 T 06-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 82 95 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 209 222 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 286 300 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 119 132 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 343 354 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 399 412 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 133 148 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 108 116 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 PRINTS PR00415 Aconitase family signature 195 208 1.6E-50 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS19830 96a24116dae925efc2887c08689b74af 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 4.6E-155 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 LFZ55_RS21705 c85aace51675f3b5411e96aad4a31700 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 2.4E-21 T 06-07-2017 IPR019201 Protein of unknown function DUF2065 LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 Hamap MF_00706 Ecotin [eco]. 1 164 40.584 T 06-07-2017 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 Gene3D G3DSA:4.10.1230.10 107 163 3.2E-30 T 06-07-2017 IPR027438 Ecotin, C-terminal LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 PIRSF PIRSF006865 1 164 2.1E-68 T 06-07-2017 IPR005658 Proteinase inhibitor I11, ecotin LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 Pfam PF03974 Ecotin 32 154 3.7E-53 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 SUPERFAMILY SSF49772 28 162 8.76E-57 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain LFZ55_RS07915 0f9e16851df97b9b80e6de1419a7bc54 164 Gene3D G3DSA:2.60.40.550 26 106 1.0E-40 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 Gene3D G3DSA:3.40.1780.10 179 344 1.4E-101 T 06-07-2017 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 Gene3D G3DSA:3.40.1780.10 1 62 1.4E-101 T 06-07-2017 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 SUPERFAMILY SSF111337 1 343 1.24E-138 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.1E-167 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 Pfam PF02547 Queuosine biosynthesis protein 4 343 5.5E-133 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.707 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS18415 b56735bd45bba1379776bba6892bcb43 354 Gene3D G3DSA:2.40.10.240 64 142 1.0E-18 T 06-07-2017 LFZ55_RS01235 4c229cd560e44424291f87197233dea1 244 SUPERFAMILY SSF51366 8 208 2.83E-41 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS01235 4c229cd560e44424291f87197233dea1 244 Pfam PF00834 Ribulose-phosphate 3 epimerase family 11 208 5.0E-45 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LFZ55_RS01235 4c229cd560e44424291f87197233dea1 244 Gene3D G3DSA:3.20.20.70 5 223 5.0E-54 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS20870 19f6b60a760d40705d103ca05b8ae9a1 325 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 41 267 3.0E-33 T 06-07-2017 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 3.9E-13 T 06-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 9.2E-48 T 06-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 SUPERFAMILY SSF46604 88 137 1.83E-15 T 06-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.792 T 06-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 Gene3D G3DSA:1.20.5.440 92 134 2.2E-24 T 06-07-2017 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 Gene3D G3DSA:2.60.15.10 3 91 2.8E-30 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 2.0E-40 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS24095 aa04422809175bed0e19e56d3b046981 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.6E-30 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LFZ55_RS02845 988f94459e2432d96e697d4921cc03dd 174 PIRSF PIRSF025550 1 173 1.2E-81 T 06-07-2017 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT LFZ55_RS02845 988f94459e2432d96e697d4921cc03dd 174 Pfam PF02036 SCP-2 sterol transfer family 43 133 3.3E-18 T 06-07-2017 IPR003033 SCP2 sterol-binding domain LFZ55_RS02845 988f94459e2432d96e697d4921cc03dd 174 SUPERFAMILY SSF55718 42 137 6.36E-22 T 06-07-2017 IPR003033 SCP2 sterol-binding domain LFZ55_RS02845 988f94459e2432d96e697d4921cc03dd 174 Gene3D G3DSA:3.30.1050.10 57 135 4.5E-12 T 06-07-2017 IPR003033 SCP2 sterol-binding domain LFZ55_RS09765 4a8eae937434996ba89ab69c96a15266 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 7.7E-47 T 06-07-2017 IPR020262 Uncharacterised protein family YecJ LFZ55_RS09765 4a8eae937434996ba89ab69c96a15266 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-34 T 06-07-2017 IPR020262 Uncharacterised protein family YecJ LFZ55_RS13760 3ead4bb9ab1fbdb5ca0a644678c2786f 294 SUPERFAMILY SSF74650 8 270 1.7E-66 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS13760 3ead4bb9ab1fbdb5ca0a644678c2786f 294 PIRSF PIRSF016020 8 294 8.4E-52 T 06-07-2017 IPR025532 Glucose-6-phosphate 1-epimerase LFZ55_RS13760 3ead4bb9ab1fbdb5ca0a644678c2786f 294 Gene3D G3DSA:2.70.98.10 11 290 2.7E-83 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS13760 3ead4bb9ab1fbdb5ca0a644678c2786f 294 Pfam PF01263 Aldose 1-epimerase 27 277 7.2E-44 T 06-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 PIRSF PIRSF004505 1 154 3.9E-40 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 SUPERFAMILY SSF75217 2 153 6.28E-50 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 1.6E-46 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 3.6E-87 T 06-07-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.06 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS17360 a1287f877bafe083a50ce1adec39d307 155 Gene3D G3DSA:3.40.1280.10 2 154 2.5E-53 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 SMART SM00474 3 171 1.6E-51 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 SMART SM00341 210 289 2.6E-20 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 Gene3D G3DSA:3.30.420.10 2 171 3.6E-13 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 7.3E-155 T 06-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.224 T 06-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 SUPERFAMILY SSF53098 2 210 4.36E-67 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 SUPERFAMILY SSF47819 295 372 6.8E-23 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 SUPERFAMILY SSF47819 195 301 2.99E-29 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 Pfam PF00570 HRDC domain 213 278 4.7E-14 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LFZ55_RS10455 91abfbe19d3ffdb2ac4d6d11cd389414 375 Pfam PF01612 3'-5' exonuclease 3 167 4.1E-46 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LFZ55_RS12360 2cd70b5079b03d3c1919f01b589e0ff4 564 Gene3D G3DSA:3.30.1330.60 420 537 1.9E-33 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS12360 2cd70b5079b03d3c1919f01b589e0ff4 564 SUPERFAMILY SSF103088 419 534 3.79E-32 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS12360 2cd70b5079b03d3c1919f01b589e0ff4 564 Pfam PF00691 OmpA family 434 529 1.9E-15 T 06-07-2017 IPR006665 OmpA-like domain LFZ55_RS10280 b1cb4a3572aa7ee6d7a203ed4f6fa616 427 Pfam PF04403 Paraquat-inducible protein A 66 217 8.4E-38 T 06-07-2017 IPR007498 Paraquat-inducible protein A LFZ55_RS10280 b1cb4a3572aa7ee6d7a203ed4f6fa616 427 Pfam PF04403 Paraquat-inducible protein A 263 418 4.9E-43 T 06-07-2017 IPR007498 Paraquat-inducible protein A LFZ55_RS10280 b1cb4a3572aa7ee6d7a203ed4f6fa616 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 19 417 1.8E-193 T 06-07-2017 IPR005219 Conserved hypothetical protein CHP00155 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 Gene3D G3DSA:3.30.70.20 84 113 5.9E-11 T 06-07-2017 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 Gene3D G3DSA:3.30.70.20 151 200 9.3E-29 T 06-07-2017 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 Gene3D G3DSA:3.30.70.20 14 83 9.3E-29 T 06-07-2017 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 SUPERFAMILY SSF54862 13 196 6.7E-65 T 06-07-2017 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 14 175 6.6E-82 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 Pfam PF13247 4Fe-4S dicluster domain 72 165 1.3E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 Gene3D G3DSA:3.30.70.20 114 150 7.2E-18 T 06-07-2017 LFZ55_RS06235 df5152ac7d9f29693b6ea983c797ac62 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS03525 9177791b8bc32e42879e9a93b114ff1a 350 Gene3D G3DSA:3.40.50.1980 24 175 2.6E-29 T 06-07-2017 LFZ55_RS03525 9177791b8bc32e42879e9a93b114ff1a 350 Gene3D G3DSA:3.40.50.1980 176 335 2.6E-39 T 06-07-2017 LFZ55_RS03525 9177791b8bc32e42879e9a93b114ff1a 350 Pfam PF01497 Periplasmic binding protein 44 297 3.9E-31 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LFZ55_RS03525 9177791b8bc32e42879e9a93b114ff1a 350 SUPERFAMILY SSF53807 28 347 1.33E-57 T 06-07-2017 LFZ55_RS09210 209e4edd54db241aa21fb5e718746714 81 Pfam PF13683 Integrase core domain 2 63 3.6E-28 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS09210 209e4edd54db241aa21fb5e718746714 81 Gene3D G3DSA:3.30.420.10 2 63 3.7E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS09210 209e4edd54db241aa21fb5e718746714 81 SUPERFAMILY SSF53098 2 70 1.02E-15 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS15910 8851e719539096b158a8e9d059fc2354 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 101 28.298 T 06-07-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LFZ55_RS15910 8851e719539096b158a8e9d059fc2354 106 Gene3D G3DSA:3.30.1390.10 4 106 7.9E-45 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LFZ55_RS15910 8851e719539096b158a8e9d059fc2354 106 SUPERFAMILY SSF54736 22 105 1.99E-33 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LFZ55_RS15910 8851e719539096b158a8e9d059fc2354 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.0E-34 T 06-07-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 LFZ55_RS03300 fe3e036b90119d8341374073df949e7a 276 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 22 273 4.2E-26 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS03300 fe3e036b90119d8341374073df949e7a 276 Gene3D G3DSA:3.40.830.10 12 276 3.6E-99 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS03300 fe3e036b90119d8341374073df949e7a 276 SUPERFAMILY SSF53213 19 275 2.22E-92 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS03300 fe3e036b90119d8341374073df949e7a 276 PIRSF PIRSF006157 15 276 6.3E-92 T 06-07-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 SMART SM00382 30 216 6.4E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 PIRSF PIRSF039137 1 237 1.4E-104 T 06-07-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 SUPERFAMILY SSF52540 4 235 5.97E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 Gene3D G3DSA:3.40.50.300 2 232 7.3E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 Pfam PF00005 ABC transporter 21 165 9.5E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01455 c3de945a52286b21e8994c8d302c563f 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Gene3D G3DSA:3.30.460.10 113 285 4.1E-62 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Gene3D G3DSA:3.30.460.10 640 812 5.2E-63 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 31 273 1.7E-92 T 06-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 554 806 3.7E-102 T 06-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 SUPERFAMILY SSF81301 11 286 5.45E-88 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 SUPERFAMILY SSF81593 816 944 7.38E-33 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Pfam PF08335 GlnD PII-uridylyltransferase 826 917 2.3E-12 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 1.0E-45 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 SUPERFAMILY SSF81301 526 813 2.06E-89 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 SUPERFAMILY SSF81593 287 436 9.42E-46 T 06-07-2017 LFZ55_RS03255 a7a57c431db3451fda55b0c82e7a5b79 947 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 946 19.939 T 06-07-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 LFZ55_RS13175 e62632bf682b41a5a9fe221f4fcac9ff 189 Pfam PF13327 Type III secretion system subunit 10 168 5.0E-56 T 06-07-2017 IPR025292 Type III secretion system protein LFZ55_RS22255 7eece470f91a753355d827ce777a33d7 206 SUPERFAMILY SSF48452 69 179 6.56E-12 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS22255 7eece470f91a753355d827ce777a33d7 206 SMART SM00028 81 114 0.0033 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS22255 7eece470f91a753355d827ce777a33d7 206 Gene3D G3DSA:1.25.40.10 120 200 3.1E-31 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS22255 7eece470f91a753355d827ce777a33d7 206 Gene3D G3DSA:1.25.40.10 74 119 7.6E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 566 40.381 T 06-07-2017 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Gene3D G3DSA:2.60.40.1250 24 142 2.5E-45 T 06-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 1.3E-33 T 06-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 SUPERFAMILY SSF52833 447 562 4.14E-26 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 SUPERFAMILY SSF74863 27 141 5.89E-40 T 06-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Gene3D G3DSA:3.40.30.10 455 563 1.4E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 174 379 5.7E-19 T 06-07-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 Pfam PF13899 Thioredoxin-like 464 539 4.0E-15 T 06-07-2017 LFZ55_RS21910 83e82fca0fcc14481ee7d6a108fb3f48 567 ProSitePatterns PS00194 Thioredoxin family active site. 474 492 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 7.6E-26 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 Gene3D G3DSA:3.40.50.300 11 263 3.2E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 SUPERFAMILY SSF52540 13 261 1.33E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 Pfam PF00005 ABC transporter 38 189 4.1E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 8.0E-19 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS01055 045ddad20cae4b82d53b51654927a2ad 337 SMART SM00382 47 239 6.5E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08750 b81e0cd6da81a6d9087791a5f0240267 464 Pfam PF02397 Bacterial sugar transferase 274 456 2.1E-58 T 06-07-2017 IPR003362 Bacterial sugar transferase LFZ55_RS08750 b81e0cd6da81a6d9087791a5f0240267 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 43 464 5.3E-148 T 06-07-2017 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LFZ55_RS08750 b81e0cd6da81a6d9087791a5f0240267 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 29 464 4.4E-163 T 06-07-2017 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 LFZ55_RS08750 b81e0cd6da81a6d9087791a5f0240267 464 Pfam PF13727 CoA-binding domain 66 238 1.7E-39 T 06-07-2017 LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 Gene3D G3DSA:2.60.120.10 36 152 2.6E-23 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 Gene3D G3DSA:1.10.10.10 160 232 1.1E-8 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 SMART SM00100 25 143 3.0E-12 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 SUPERFAMILY SSF51206 36 152 6.02E-24 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 Pfam PF13545 Crp-like helix-turn-helix domain 163 229 1.4E-8 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 SUPERFAMILY SSF46785 161 231 7.86E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23880 02428d488f3221f5825892c1b1ce65e9 233 Pfam PF00027 Cyclic nucleotide-binding domain 46 124 1.3E-15 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 SMART SM00382 348 526 1.3E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 SUPERFAMILY SSF90123 5 299 3.27E-27 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 Gene3D G3DSA:1.20.1560.10 8 304 5.5E-22 T 06-07-2017 LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 Gene3D G3DSA:3.40.50.300 322 530 1.2E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 3.2E-112 T 06-07-2017 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 SUPERFAMILY SSF52540 314 530 1.83E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS07910 31140a2d247924bc3ef22c2cdde23f4b 547 Pfam PF00005 ABC transporter 341 477 5.0E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS10330 c31b84c8a246879b2509ec6492ce68a3 95 Pfam PF13974 YebO-like protein 16 95 8.7E-33 T 06-07-2017 IPR025594 YebO-like protein LFZ55_RS01690 591cff7d76d745248003043cb666d1ec 569 Pfam PF13687 Domain of unknown function (DUF4153) 150 388 5.2E-32 T 06-07-2017 IPR025291 Protein of unknown function DUF4153 LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 Pfam PF01230 HIT domain 12 109 4.4E-30 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 Gene3D G3DSA:3.30.428.10 3 110 9.0E-38 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 06-07-2017 IPR019808 Histidine triad, conserved site LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein LFZ55_RS14240 449bf8e1ad719dc2ea20872416788c3b 119 SUPERFAMILY SSF54197 3 113 1.13E-35 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 SMART SM00354 1 71 1.0E-34 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 SUPERFAMILY SSF53822 61 332 2.57E-83 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 SUPERFAMILY SSF47413 1 59 5.38E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-20 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 Gene3D G3DSA:3.40.50.2300 58 166 3.5E-44 T 06-07-2017 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 Gene3D G3DSA:1.10.260.40 2 57 1.7E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 Gene3D G3DSA:3.40.50.2300 167 330 1.0E-50 T 06-07-2017 LFZ55_RS04365 7b6b513ca25f01bf5785ad593b806011 342 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.9E-35 T 06-07-2017 LFZ55_RS05045 3a1998db295e4342fe98d941d1751bd3 80 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 7 79 6.8E-21 T 06-07-2017 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 LFZ55_RS05045 3a1998db295e4342fe98d941d1751bd3 80 SUPERFAMILY SSF140129 3 75 2.49E-24 T 06-07-2017 LFZ55_RS05045 3a1998db295e4342fe98d941d1751bd3 80 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 9 79 4.8E-27 T 06-07-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 LFZ55_RS21505 eb37caeb2706a68abeed573ebb88d08d 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.1E-30 T 06-07-2017 IPR009491 Protein of unknown function DUF1107 LFZ55_RS21505 eb37caeb2706a68abeed573ebb88d08d 68 Gene3D G3DSA:3.30.1910.10 1 65 1.8E-37 T 06-07-2017 LFZ55_RS21505 eb37caeb2706a68abeed573ebb88d08d 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-29 T 06-07-2017 IPR009491 Protein of unknown function DUF1107 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 474 5.8E-81 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 Pfam PF00854 POT family 77 442 1.4E-89 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 Gene3D G3DSA:1.20.1250.20 11 191 3.6E-20 T 06-07-2017 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 493 58.675 T 06-07-2017 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 SUPERFAMILY SSF103473 7 195 8.37E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS17050 51494545b772c9ebd1f2170b77481ccf 493 SUPERFAMILY SSF103473 257 479 8.37E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS22720 2e64fd801815b7fdf58b4cb794776bf1 151 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 28 123 4.0E-50 T 06-07-2017 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 LFZ55_RS22720 2e64fd801815b7fdf58b4cb794776bf1 151 Pfam PF13801 Heavy-metal resistance 8 124 1.9E-24 T 06-07-2017 IPR025961 Heavy-metal resistance protein LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Gene3D G3DSA:3.40.50.10070 22 154 3.2E-53 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Pfam PF04052 TolB amino-terminal domain 23 121 4.8E-33 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 2.3E-159 T 06-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.936 T 06-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Gene3D G3DSA:2.130.10.10 155 428 7.6E-75 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 SUPERFAMILY SSF52964 28 161 6.93E-41 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.2E-5 T 06-07-2017 IPR011659 WD40-like Beta Propeller LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0031 T 06-07-2017 IPR011659 WD40-like Beta Propeller LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 2.6E-9 T 06-07-2017 IPR011659 WD40-like Beta Propeller LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 1.1E-10 T 06-07-2017 IPR011659 WD40-like Beta Propeller LFZ55_RS16845 a94cfa7553817a3751506509d8a93dc5 430 SUPERFAMILY SSF69304 155 428 2.48E-55 T 06-07-2017 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 SUPERFAMILY SSF56176 434 517 2.04E-16 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 Gene3D G3DSA:1.20.1250.20 7 113 2.1E-4 T 06-07-2017 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 Gene3D G3DSA:3.30.465.10 414 510 4.2E-21 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 SUPERFAMILY SSF54631 288 422 7.96E-23 T 06-07-2017 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 Gene3D G3DSA:3.10.580.10 286 413 3.6E-12 T 06-07-2017 LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 Pfam PF03471 Transporter associated domain 434 510 1.0E-16 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 SMART SM01091 431 512 2.2E-20 T 06-07-2017 IPR005170 Transporter-associated domain LFZ55_RS10395 6fcfcce0d5ea8f347f6eb62abcb0f03b 519 Pfam PF03741 Integral membrane protein TerC family 14 203 3.6E-49 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 LFZ55_RS17100 889439551ca32e3b0adebad54e67200f 439 Pfam PF13520 Amino acid permease 10 408 3.6E-47 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS17100 889439551ca32e3b0adebad54e67200f 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 433 3.3E-252 T 06-07-2017 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 LFZ55_RS17100 889439551ca32e3b0adebad54e67200f 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 1.5E-151 T 06-07-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 LFZ55_RS17100 889439551ca32e3b0adebad54e67200f 439 PIRSF PIRSF006060 1 438 1.0E-46 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 SUPERFAMILY SSF103491 16 424 4.45E-134 T 06-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 Pfam PF00344 SecY translocase 76 417 4.0E-120 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 06-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PIRSF PIRSF004557 11 441 3.6E-124 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 06-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.1E-98 T 06-07-2017 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.5E-141 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 Gene3D G3DSA:1.10.3370.10 17 437 1.3E-167 T 06-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS02140 6e40e3a70c2b0a81c1815937c2da489b 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.898 T 06-07-2017 IPR026593 Protein translocase subunit SecY LFZ55_RS22225 e0ef66e70dcf5f9c01309c3eb7717ecc 252 SUPERFAMILY SSF56281 5 251 5.55E-34 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS22225 e0ef66e70dcf5f9c01309c3eb7717ecc 252 Pfam PF12706 Beta-lactamase superfamily domain 73 223 4.3E-13 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS22225 e0ef66e70dcf5f9c01309c3eb7717ecc 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 5 248 6.2E-121 T 06-07-2017 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 LFZ55_RS22225 e0ef66e70dcf5f9c01309c3eb7717ecc 252 Gene3D G3DSA:3.60.15.10 2 251 2.2E-56 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 Gene3D G3DSA:3.40.50.2300 179 325 7.4E-36 T 06-07-2017 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 340 8.6E-84 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 06-07-2017 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 Gene3D G3DSA:1.10.260.40 7 58 4.3E-22 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 Gene3D G3DSA:3.40.50.2300 59 178 3.7E-35 T 06-07-2017 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 SUPERFAMILY SSF47413 5 64 5.07E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.9E-18 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 SMART SM00354 6 76 1.6E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LFZ55_RS12880 0e7c212ab9b87152b357415da653b398 342 SUPERFAMILY SSF53822 63 332 5.55E-51 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS21800 efb4f585f7d9bf161812e94a39add894 500 PIRSF PIRSF006060 1 499 8.5E-60 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS21800 efb4f585f7d9bf161812e94a39add894 500 Pfam PF13520 Amino acid permease 9 457 3.2E-31 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS08185 b9e914ffaa01f67254b076874b2ddb88 377 PIRSF PIRSF000014 1 376 1.9E-128 T 06-07-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 LFZ55_RS08185 b9e914ffaa01f67254b076874b2ddb88 377 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 7 175 5.8E-58 T 06-07-2017 IPR005126 NapC/NirT cytochrome c, N-terminal LFZ55_RS08185 b9e914ffaa01f67254b076874b2ddb88 377 Gene3D G3DSA:1.20.850.10 284 328 5.1E-4 T 06-07-2017 LFZ55_RS08185 b9e914ffaa01f67254b076874b2ddb88 377 Gene3D G3DSA:1.10.3820.10 9 176 3.2E-24 T 06-07-2017 LFZ55_RS08185 b9e914ffaa01f67254b076874b2ddb88 377 SUPERFAMILY SSF48695 4 176 5.72E-43 T 06-07-2017 IPR011031 Multihaem cytochrome LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 SUPERFAMILY SSF46894 139 210 1.02E-21 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 Gene3D G3DSA:1.10.10.10 153 210 7.8E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 SMART SM00448 7 120 2.0E-32 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 3.2E-24 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 Pfam PF00072 Response regulator receiver domain 9 121 3.0E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 SMART SM00421 151 208 3.4E-24 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 Gene3D G3DSA:3.40.50.2300 6 152 6.5E-39 T 06-07-2017 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS07995 c5253ed666932b72e15e53c04ec8b83b 215 SUPERFAMILY SSF52172 7 137 5.41E-35 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.7E-22 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 Pfam PF03466 LysR substrate binding domain 88 293 2.4E-44 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 Gene3D G3DSA:1.10.10.10 1 82 4.1E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 Gene3D G3DSA:3.40.190.10 90 177 3.2E-26 T 06-07-2017 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 SUPERFAMILY SSF53850 89 298 7.29E-40 T 06-07-2017 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 Gene3D G3DSA:3.40.190.10 178 270 5.0E-31 T 06-07-2017 LFZ55_RS12765 7261523bc8b8f49f744a7f0c8b5f2da3 299 SUPERFAMILY SSF46785 4 89 1.67E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.263 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 Gene3D G3DSA:2.40.50.100 20 82 8.6E-32 T 06-07-2017 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 SUPERFAMILY SSF110324 2 82 2.48E-34 T 06-07-2017 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.6E-38 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.6E-38 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.6E-38 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 9.0E-19 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.1E-43 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.6E-39 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS02705 a3e63be06cec204a097f2c50b6b442ef 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 06-07-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 06-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 06-07-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 06-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LFZ55_RS22830 38ca8ef3208c49447b0fe0266484f764 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 06-07-2017 LFZ55_RS16280 61ca6f99e84988122842b80138cbc475 167 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 2.9E-58 T 06-07-2017 IPR009679 Bacteriophage 186, CII LFZ55_RS18420 5889dfde2fc769eeb92eb2c470f39b5f 193 Pfam PF04336 Protein of unknown function, DUF479 81 186 1.1E-29 T 06-07-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LFZ55_RS18420 5889dfde2fc769eeb92eb2c470f39b5f 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 54.218 T 06-07-2017 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LFZ55_RS18420 5889dfde2fc769eeb92eb2c470f39b5f 193 PIRSF PIRSF011489 1 193 1.9E-82 T 06-07-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LFZ55_RS13340 b0b8f0992f7b2c46578601cff33ce45c 78 SUPERFAMILY SSF58042 24 74 4.58E-23 T 06-07-2017 LFZ55_RS13340 b0b8f0992f7b2c46578601cff33ce45c 78 Gene3D G3DSA:1.20.5.190 22 73 1.9E-24 T 06-07-2017 LFZ55_RS13340 b0b8f0992f7b2c46578601cff33ce45c 78 PIRSF PIRSF002855 1 78 1.5E-29 T 06-07-2017 IPR016367 Murein-lipoprotein LFZ55_RS13340 b0b8f0992f7b2c46578601cff33ce45c 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 5.9E-25 T 06-07-2017 IPR006817 Lipoprotein leucine-zipper GO:0019867 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 3.9E-58 T 06-07-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 Pfam PF01750 Hydrogenase maturation protease 23 152 3.4E-37 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 Gene3D G3DSA:3.40.50.1450 5 162 2.4E-47 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 PRINTS PR00446 Hydrogen uptake protein signature 18 29 9.9E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 PRINTS PR00446 Hydrogen uptake protein signature 59 69 9.9E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 PRINTS PR00446 Hydrogen uptake protein signature 70 86 9.9E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 PRINTS PR00446 Hydrogen uptake protein signature 6 18 9.9E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 PRINTS PR00446 Hydrogen uptake protein signature 38 55 9.9E-29 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 SUPERFAMILY SSF53163 5 161 3.4E-42 T 06-07-2017 IPR023430 Peptidase HybD-like domain LFZ55_RS10595 d494367ad75bc5a301e4e928c98bf361 198 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 1.1E-41 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:1.20.1270.10 529 615 4.5E-33 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Pfam PF00012 Hsp70 protein 22 600 2.4E-201 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:2.60.34.10 387 528 3.7E-55 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 SUPERFAMILY SSF100934 504 615 5.89E-37 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 SUPERFAMILY SSF53067 200 377 5.05E-51 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.30.420.40 22 69 1.7E-52 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.30.420.40 133 205 1.7E-52 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.30.420.40 206 238 6.8E-32 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.30.420.40 314 356 6.8E-32 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 SUPERFAMILY SSF53067 20 196 4.66E-49 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.90.640.10 239 310 8.5E-10 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Gene3D G3DSA:3.30.30.30 70 118 4.3E-9 T 06-07-2017 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.467 T 06-07-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 SUPERFAMILY SSF100920 384 535 1.11E-50 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LFZ55_RS06185 0abed6ad047f38acb846d8bd385129e9 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.1E-270 T 06-07-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 SUPERFAMILY SSF54364 13 86 6.93E-29 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 Gene3D G3DSA:3.10.20.80 13 86 8.9E-36 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 6.2E-78 T 06-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 06-07-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.826 T 06-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 Gene3D G3DSA:3.30.110.10 87 179 1.6E-40 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 SUPERFAMILY SSF55200 90 179 3.92E-35 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.4E-38 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS13515 ea7c3837f1286bd2e32643f500aa1acc 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 2.8E-31 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LFZ55_RS15410 f135cb5494cca2e5b77837ff45c166a4 155 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 65 155 5.0E-30 T 06-07-2017 IPR004914 Antirestriction protein LFZ55_RS15410 f135cb5494cca2e5b77837ff45c166a4 155 Pfam PF03230 Antirestriction protein 65 155 3.8E-34 T 06-07-2017 IPR004914 Antirestriction protein LFZ55_RS21470 995fbbe8439a4617678e99435e2bc3fb 112 Gene3D G3DSA:3.40.50.2300 24 112 3.9E-25 T 06-07-2017 LFZ55_RS21470 995fbbe8439a4617678e99435e2bc3fb 112 SUPERFAMILY SSF53822 23 112 2.83E-23 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS21470 995fbbe8439a4617678e99435e2bc3fb 112 Pfam PF13407 Periplasmic binding protein domain 26 112 2.4E-16 T 06-07-2017 IPR025997 Periplasmic binding protein LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 3.8E-262 T 06-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 SUPERFAMILY SSF47917 383 511 1.18E-45 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Gene3D G3DSA:2.40.30.20 1 93 3.5E-29 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.982 T 06-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Gene3D G3DSA:1.20.150.20 383 510 6.9E-49 T 06-07-2017 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 SUPERFAMILY SSF52540 96 381 2.66E-94 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Gene3D G3DSA:3.40.50.300 94 382 1.2E-113 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.4E-74 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.8E-45 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS24080 464c87f6338a6c2f89661bf6ab2b6ef6 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS13785 e28d07ac38304fddfbdefe6c1dffbe4a 428 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 424 42.269 T 06-07-2017 IPR006698 Uncharacterised protein family UPF0229 LFZ55_RS13785 e28d07ac38304fddfbdefe6c1dffbe4a 428 Pfam PF04285 Protein of unknown function (DUF444) 4 422 2.6E-186 T 06-07-2017 IPR006698 Uncharacterised protein family UPF0229 LFZ55_RS12980 80e001ae15a765eca889bacddb37c9ab 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 96 2.0E-14 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor LFZ55_RS12980 80e001ae15a765eca889bacddb37c9ab 109 SUPERFAMILY SSF141488 28 107 6.41E-22 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.5E-20 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 Gene3D G3DSA:1.20.1050.10 102 208 1.7E-17 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 2.8E-13 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 Gene3D G3DSA:3.40.30.10 7 101 1.8E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS02500 3b1b388ed7a17a5f8ec17038a97fb457 212 SUPERFAMILY SSF47616 82 208 9.24E-28 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS05145 621e3d610dece3f7944bc5f71485b5f5 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 3.1E-74 T 06-07-2017 IPR021285 Transcription regulator, HycA LFZ55_RS09035 be774bca3d5a72f22e7a804f5da5991f 172 Pfam PF02287 Dehydratase small subunit 38 169 8.8E-62 T 06-07-2017 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 LFZ55_RS09035 be774bca3d5a72f22e7a804f5da5991f 172 PIRSF PIRSF018505 1 172 7.6E-77 T 06-07-2017 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 LFZ55_RS09035 be774bca3d5a72f22e7a804f5da5991f 172 SUPERFAMILY SSF47148 36 172 1.96E-63 T 06-07-2017 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 LFZ55_RS22195 93c40339b5d879f312e87acd3f996055 282 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 2.5E-149 T 06-07-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 LFZ55_RS22195 93c40339b5d879f312e87acd3f996055 282 PIRSF PIRSF011468 1 281 2.6E-169 T 06-07-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 Pfam PF01494 FAD binding domain 2 321 4.3E-20 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 Gene3D G3DSA:3.50.50.60 2 180 1.4E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 Gene3D G3DSA:3.50.50.60 266 354 1.4E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 SUPERFAMILY SSF51905 2 175 1.04E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 SUPERFAMILY SSF51905 265 381 1.04E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 8.5E-140 T 06-07-2017 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.3E-13 T 06-07-2017 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.3E-13 T 06-07-2017 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.3E-13 T 06-07-2017 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.3E-13 T 06-07-2017 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 7.6E-133 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS04080 f972f0b0ba1ec05f315f353ec0a911e1 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 06-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 8.6E-51 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 8.6E-51 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 8.6E-51 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 8.6E-51 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 06-07-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.1E-66 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.0E-79 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS23565 1a67f048ce3e6fd46dce8063f756b70b 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 241 18.18 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LFZ55_RS03440 38d4cb3fc20199a4e86b1464ebeb0105 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 2.1E-29 T 06-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LFZ55_RS03440 38d4cb3fc20199a4e86b1464ebeb0105 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.6E-68 T 06-07-2017 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 SUPERFAMILY SSF63411 265 502 4.54E-67 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Pfam PF05193 Peptidase M16 inactive domain 217 392 4.8E-19 T 06-07-2017 IPR007863 Peptidase M16, C-terminal LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Pfam PF05193 Peptidase M16 inactive domain 681 856 1.2E-13 T 06-07-2017 IPR007863 Peptidase M16, C-terminal LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 SUPERFAMILY SSF63411 735 957 1.59E-46 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Gene3D G3DSA:3.30.830.10 507 729 6.5E-63 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 675 2.1E-53 T 06-07-2017 IPR032632 Peptidase M16, middle/third domain LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 3.2E-38 T 06-07-2017 IPR011765 Peptidase M16, N-terminal LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 SUPERFAMILY SSF63411 33 262 6.95E-49 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Gene3D G3DSA:3.30.830.10 274 506 1.8E-66 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 06-07-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Gene3D G3DSA:3.30.830.10 29 265 1.4E-59 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 Gene3D G3DSA:3.30.830.10 730 959 2.6E-60 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 LFZ55_RS04465 31ee1c4774652b2d095265a5a088d4f8 962 SUPERFAMILY SSF63411 504 729 6.46E-44 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 Gene3D G3DSA:3.40.710.10 28 277 2.0E-64 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 261 4.1E-86 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 5.2E-14 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 5.2E-14 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 5.2E-14 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08430 e27dc55357c7a16bbce3edd7c88950f0 315 SUPERFAMILY SSF56601 3 277 1.8E-60 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS05965 727d36601a5cb400da638a039e554199 318 Pfam PF03888 MucB/RseB N-terminal domain 28 205 1.8E-61 T 06-07-2017 IPR033434 MucB/RseB, N-terminal LFZ55_RS05965 727d36601a5cb400da638a039e554199 318 PIRSF PIRSF005427 1 318 5.9E-100 T 06-07-2017 IPR005588 MucB/RseB LFZ55_RS05965 727d36601a5cb400da638a039e554199 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 1.8E-30 T 06-07-2017 IPR033436 MucB/RseB, C-terminal LFZ55_RS05965 727d36601a5cb400da638a039e554199 318 Gene3D G3DSA:2.50.20.10 125 186 2.5E-7 T 06-07-2017 LFZ55_RS02665 45ab178d1848aae9829cba3a3ce702fd 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 153 7.9E-56 T 06-07-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 LFZ55_RS02665 45ab178d1848aae9829cba3a3ce702fd 183 Pfam PF02470 MlaD protein 39 116 1.7E-22 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS22390 3b25973e0bb9e34a91a34437d4ae9b75 439 Gene3D G3DSA:1.20.1600.10 22 411 1.0E-50 T 06-07-2017 LFZ55_RS22390 3b25973e0bb9e34a91a34437d4ae9b75 439 SUPERFAMILY SSF56954 4 415 8.24E-65 T 06-07-2017 LFZ55_RS22390 3b25973e0bb9e34a91a34437d4ae9b75 439 Pfam PF02321 Outer membrane efflux protein 27 209 3.0E-21 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS22390 3b25973e0bb9e34a91a34437d4ae9b75 439 Pfam PF02321 Outer membrane efflux protein 236 415 2.1E-24 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS18245 1546e575e4f3bd964390f4cf720a393d 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 5.0E-6 T 06-07-2017 IPR012640 Membrane lipoprotein, lipid attachment site LFZ55_RS18245 1546e575e4f3bd964390f4cf720a393d 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 4.9E-52 T 06-07-2017 IPR005619 Uncharacterised protein family, YajG LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 2.3E-148 T 06-07-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 Pfam PF00005 ABC transporter 36 177 8.5E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 SMART SM00382 44 227 7.1E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 Gene3D G3DSA:3.40.50.300 11 254 8.7E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 SUPERFAMILY SSF50331 253 375 6.46E-17 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 Pfam PF08402 TOBE domain 295 375 2.7E-20 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LFZ55_RS16055 4c010ec14a1162f7b75c8d2f6ebf2727 377 SUPERFAMILY SSF52540 19 256 1.02E-87 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02965 40ff0b534a0ca2cfb6817f519bb318f5 181 SUPERFAMILY SSF49401 27 181 1.04E-24 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS02965 40ff0b534a0ca2cfb6817f519bb318f5 181 Pfam PF16970 Type-1 fimbrial protein, A 54 181 2.5E-18 T 06-07-2017 LFZ55_RS02965 40ff0b534a0ca2cfb6817f519bb318f5 181 Gene3D G3DSA:2.60.40.1090 26 181 1.8E-26 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS24710 6f55eed94a0e941d53b29e6481d29ee0 221 Gene3D G3DSA:3.40.50.2300 12 82 0.001 T 06-07-2017 LFZ55_RS01970 3855559de668867bc745c8c45924afb8 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.9E-28 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein LFZ55_RS01970 3855559de668867bc745c8c45924afb8 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 9.8E-54 T 06-07-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 LFZ55_RS01970 3855559de668867bc745c8c45924afb8 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 40.121 T 06-07-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 LFZ55_RS01970 3855559de668867bc745c8c45924afb8 128 SUPERFAMILY SSF75169 1 128 1.39E-38 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS01970 3855559de668867bc745c8c45924afb8 128 Gene3D G3DSA:3.40.1260.10 1 128 4.7E-31 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 Gene3D G3DSA:3.30.930.10 9 327 2.1E-134 T 06-07-2017 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.935 T 06-07-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 SUPERFAMILY SSF46589 13 99 1.31E-22 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 SUPERFAMILY SSF55681 92 327 1.82E-81 T 06-07-2017 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.7E-118 T 06-07-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.6E-27 T 06-07-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LFZ55_RS13495 3b8a87c67590726de5b7e0f8858d0ef7 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.5E-107 T 06-07-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LFZ55_RS02240 eb8ce29b4811e54be249b65a999c58c5 85 SUPERFAMILY SSF160272 2 85 7.72E-29 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 LFZ55_RS02240 eb8ce29b4811e54be249b65a999c58c5 85 Gene3D G3DSA:3.30.160.140 2 85 6.5E-35 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 LFZ55_RS02240 eb8ce29b4811e54be249b65a999c58c5 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 5.4E-27 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 SUPERFAMILY SSF51556 5 325 1.9E-76 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 8.5E-102 T 06-07-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.8E-108 T 06-07-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 Gene3D G3DSA:3.20.20.140 6 331 4.5E-97 T 06-07-2017 LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.351 T 06-07-2017 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 LFZ55_RS12895 b660c74e1b9a9e8d430479a90b1b134d 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 06-07-2017 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 LFZ55_RS07560 a255eb4584389a7e8a7772cfbac973dc 276 SUPERFAMILY SSF52518 4 262 4.47E-80 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07560 a255eb4584389a7e8a7772cfbac973dc 276 Gene3D G3DSA:3.40.50.970 2 266 2.0E-85 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07560 a255eb4584389a7e8a7772cfbac973dc 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 261 1.2E-46 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LFZ55_RS07460 2b24a1e5d344bc3176d081bcf0aaebf5 473 PIRSF PIRSF006060 2 471 1.4E-75 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS07460 2b24a1e5d344bc3176d081bcf0aaebf5 473 SUPERFAMILY SSF81665 324 433 2.48E-6 T 06-07-2017 LFZ55_RS07460 2b24a1e5d344bc3176d081bcf0aaebf5 473 SUPERFAMILY SSF81665 101 194 2.48E-6 T 06-07-2017 LFZ55_RS07460 2b24a1e5d344bc3176d081bcf0aaebf5 473 Pfam PF13520 Amino acid permease 28 446 1.9E-67 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 Gene3D G3DSA:1.10.1020.10 59 165 1.8E-32 T 06-07-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 TIGRFAM TIGR00571 dam: DNA adenine methylase 4 273 1.0E-81 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 253 2.1E-62 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 PIRSF PIRSF000398 1 280 8.5E-64 T 06-07-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 5.9E-17 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 5.9E-17 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 185 197 5.9E-17 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 5.9E-17 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 Gene3D G3DSA:3.40.50.150 169 274 3.9E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 Gene3D G3DSA:3.40.50.150 2 58 3.9E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16250 65a2a09bc8c98351c139f52539eb3cc7 286 SUPERFAMILY SSF53335 3 274 2.0E-69 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 Gene3D G3DSA:3.40.50.150 187 373 2.3E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 49.159 T 06-07-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 SUPERFAMILY SSF53335 189 373 4.63E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 Pfam PF05175 Methyltransferase small domain 199 370 3.4E-57 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS03130 34c64bc76f2661f6e358f29f1d7e3e81 378 PIRSF PIRSF037565 1 374 1.4E-160 T 06-07-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS16890 a4983e70478396864fd41f281e424784 83 Gene3D G3DSA:3.40.1410.10 2 79 2.2E-19 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS16890 a4983e70478396864fd41f281e424784 83 Pfam PF07702 UTRA domain 4 75 7.2E-14 T 06-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LFZ55_RS16890 a4983e70478396864fd41f281e424784 83 SUPERFAMILY SSF64288 2 82 2.51E-19 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS14930 2fcf4b776528f913d0aba814a6cf15f6 207 Gene3D G3DSA:3.40.30.10 37 202 2.0E-39 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14930 2fcf4b776528f913d0aba814a6cf15f6 207 ProSitePatterns PS00194 Thioredoxin family active site. 58 76 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS14930 2fcf4b776528f913d0aba814a6cf15f6 207 SUPERFAMILY SSF52833 34 198 6.35E-39 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14930 2fcf4b776528f913d0aba814a6cf15f6 207 Pfam PF01323 DSBA-like thioredoxin domain 57 195 3.3E-23 T 06-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 SUPERFAMILY SSF52402 1 142 9.21E-27 T 06-07-2017 LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 Gene3D G3DSA:3.40.50.620 2 142 1.9E-28 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 Pfam PF00582 Universal stress protein family 1 142 7.4E-25 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 PRINTS PR01438 Universal stress protein signature 120 142 3.4E-14 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-14 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS17510 ebad2b14049e8d283ed641c2530ade01 142 PRINTS PR01438 Universal stress protein signature 103 115 3.4E-14 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS19175 5cb511948bab1d3991ca9a48edfe7e81 235 Gene3D G3DSA:2.40.30.70 4 158 2.9E-52 T 06-07-2017 IPR023370 TsaA-like domain LFZ55_RS19175 5cb511948bab1d3991ca9a48edfe7e81 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 06-07-2017 IPR023368 Uncharacterised protein family UPF0066, conserved site LFZ55_RS19175 5cb511948bab1d3991ca9a48edfe7e81 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 148 7.4E-60 T 06-07-2017 IPR023370 TsaA-like domain LFZ55_RS19175 5cb511948bab1d3991ca9a48edfe7e81 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.4E-41 T 06-07-2017 IPR023370 TsaA-like domain LFZ55_RS19175 5cb511948bab1d3991ca9a48edfe7e81 235 SUPERFAMILY SSF118196 1 229 1.05E-85 T 06-07-2017 IPR023370 TsaA-like domain LFZ55_RS11490 7b4346208079173f7d900e63e5546c08 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 38.224 T 06-07-2017 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 LFZ55_RS11490 7b4346208079173f7d900e63e5546c08 168 Pfam PF08534 Redoxin 20 163 1.7E-28 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 LFZ55_RS11490 7b4346208079173f7d900e63e5546c08 168 Gene3D G3DSA:3.40.30.10 4 168 7.0E-44 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS11490 7b4346208079173f7d900e63e5546c08 168 SUPERFAMILY SSF52833 4 163 1.17E-42 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS11490 7b4346208079173f7d900e63e5546c08 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 06-07-2017 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 LFZ55_RS15260 069007aeb273ab1d90bf4efd961f31b6 195 Gene3D G3DSA:3.90.190.10 34 170 1.4E-29 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like LFZ55_RS15260 069007aeb273ab1d90bf4efd961f31b6 195 SUPERFAMILY SSF52799 37 158 2.1E-21 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like LFZ55_RS15260 069007aeb273ab1d90bf4efd961f31b6 195 Pfam PF03162 Tyrosine phosphatase family 37 134 6.9E-11 T 06-07-2017 IPR004861 Protein-tyrosine phosphatase, SIW14-like LFZ55_RS15260 069007aeb273ab1d90bf4efd961f31b6 195 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 120 130 - T 06-07-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 LFZ55_RS03790 beb2b0bd41167f81dc59c28f37c264f3 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 9.9E-44 T 06-07-2017 IPR007416 Protein of unknown function DUF469 LFZ55_RS22325 8b2dc2d95c31afd9c9e39ec995121afe 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.0E-244 T 06-07-2017 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 LFZ55_RS22325 8b2dc2d95c31afd9c9e39ec995121afe 548 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 1.5E-78 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LFZ55_RS21140 b702ab7b3e9bead350e7a6bc7ef2ba2a 278 Gene3D G3DSA:1.10.3720.10 17 267 5.1E-45 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS21140 b702ab7b3e9bead350e7a6bc7ef2ba2a 278 SUPERFAMILY SSF161098 8 270 2.22E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS21140 b702ab7b3e9bead350e7a6bc7ef2ba2a 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 261 3.4E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17765 7232b8545dfae129c58bee96ed99d376 747 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 384 626 9.9E-12 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS17765 7232b8545dfae129c58bee96ed99d376 747 SUPERFAMILY SSF103515 439 747 1.44E-38 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17765 7232b8545dfae129c58bee96ed99d376 747 Gene3D G3DSA:2.40.128.130 439 745 1.0E-44 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17765 7232b8545dfae129c58bee96ed99d376 747 Pfam PF03797 Autotransporter beta-domain 465 733 5.0E-45 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS17765 7232b8545dfae129c58bee96ed99d376 747 SMART SM00869 466 737 5.7E-37 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.3E-22 T 06-07-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 06-07-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13510 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 06-07-2017 LFZ55_RS04770 10f7e6c25b99e7df0cd7b6da609856f0 348 Pfam PF04389 Peptidase family M28 100 329 6.2E-31 T 06-07-2017 IPR007484 Peptidase M28 LFZ55_RS04770 10f7e6c25b99e7df0cd7b6da609856f0 348 Gene3D G3DSA:3.40.630.10 36 345 8.1E-45 T 06-07-2017 LFZ55_RS04770 10f7e6c25b99e7df0cd7b6da609856f0 348 SUPERFAMILY SSF53187 42 317 2.17E-35 T 06-07-2017 LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 SUPERFAMILY SSF55021 249 337 5.72E-19 T 06-07-2017 LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 SMART SM00382 31 227 3.4E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 SMART SM00930 259 336 9.1E-26 T 06-07-2017 IPR018449 NIL domain LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 SUPERFAMILY SSF52540 1 241 3.96E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 Gene3D G3DSA:3.30.70.260 238 337 7.5E-28 T 06-07-2017 LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 Pfam PF09383 NIL domain 262 335 2.4E-18 T 06-07-2017 IPR018449 NIL domain LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 Gene3D G3DSA:3.40.50.300 1 237 1.1E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17890 c3dd8e1467283a8351834ca74056e0cf 338 Pfam PF00005 ABC transporter 22 170 7.5E-36 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS11950 3798b79612fd56ac799c9b6eae5bc0b6 654 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS11950 3798b79612fd56ac799c9b6eae5bc0b6 654 Pfam PF01136 Peptidase family U32 79 305 3.6E-71 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS11950 3798b79612fd56ac799c9b6eae5bc0b6 654 Pfam PF12392 Collagenase 391 505 1.4E-16 T 06-07-2017 IPR020988 Peptidase U32, collagenase LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.697 T 06-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 8.9E-8 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.5E-7 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 2.1E-9 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Gene3D G3DSA:2.160.10.10 135 309 8.0E-44 T 06-07-2017 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.5E-130 T 06-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Gene3D G3DSA:2.160.10.10 92 134 6.0E-9 T 06-07-2017 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.4E-21 T 06-07-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 LFZ55_RS19260 7fae6da925249332fca22c5d97b4b992 341 SUPERFAMILY SSF51161 32 316 7.15E-87 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 SMART SM01152 7 83 4.5E-35 T 06-07-2017 IPR003746 Protein of unknown function DUF167 LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 Gene3D G3DSA:3.30.1200.10 3 92 4.8E-30 T 06-07-2017 IPR003746 Protein of unknown function DUF167 LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 7.0E-33 T 06-07-2017 IPR005228 Conserved hypothetical protein CHP00251 LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 19.996 T 06-07-2017 IPR003746 Protein of unknown function DUF167 LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 SUPERFAMILY SSF69786 3 93 2.35E-31 T 06-07-2017 IPR003746 Protein of unknown function DUF167 LFZ55_RS03815 586d5c682e12ea92504e7a091510bf06 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 3.3E-25 T 06-07-2017 IPR003746 Protein of unknown function DUF167 LFZ55_RS03060 582b06b4e2c0a10de7587f684d370d8a 99 Pfam PF13997 YqjK-like protein 14 86 4.1E-28 T 06-07-2017 IPR025612 YqjK-like protein LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 SUPERFAMILY SSF56059 98 288 4.42E-51 T 06-07-2017 LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 2.7E-78 T 06-07-2017 IPR013651 ATP-grasp fold, RimK-type LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 Gene3D G3DSA:3.30.1490.20 112 173 7.6E-7 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.9E-93 T 06-07-2017 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 Gene3D G3DSA:3.30.470.20 174 277 4.2E-37 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 Gene3D G3DSA:3.40.50.20 8 111 1.1E-15 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS16070 25c40b75d166734f1f9946820d7e64c3 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.276 T 06-07-2017 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 SUPERFAMILY SSF51621 249 549 3.4E-110 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Gene3D G3DSA:1.10.274.10 23 132 3.5E-39 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Gene3D G3DSA:3.20.20.60 256 572 7.9E-116 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 SUPERFAMILY SSF52009 125 245 3.4E-37 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.9E-271 T 06-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Gene3D G3DSA:3.50.30.10 133 255 1.1E-42 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 8.6E-127 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 06-07-2017 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 06-07-2017 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 06-07-2017 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 06-07-2017 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 06-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 6.0E-30 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 PIRSF PIRSF000732 1 574 7.5E-218 T 06-07-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 6.4E-23 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LFZ55_RS07070 6ea581b4a9ee036da54fd98d84cbd731 575 SUPERFAMILY SSF47831 23 143 4.84E-34 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LFZ55_RS22760 e99a4567ec383172bc64baecfd91f3eb 631 Pfam PF01964 Radical SAM ThiC family 148 596 1.6E-198 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 LFZ55_RS22760 e99a4567ec383172bc64baecfd91f3eb 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.115 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 LFZ55_RS22760 e99a4567ec383172bc64baecfd91f3eb 631 Pfam PF13667 ThiC-associated domain 27 108 5.7E-34 T 06-07-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 LFZ55_RS22760 e99a4567ec383172bc64baecfd91f3eb 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 1.1E-222 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 LFZ55_RS21990 30b3c2aa125d462e2887003d041c02f8 99 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 14 95 3.9E-37 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS21990 30b3c2aa125d462e2887003d041c02f8 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 52 68 2.7E-22 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS21990 30b3c2aa125d462e2887003d041c02f8 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 32 47 2.7E-22 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS21990 30b3c2aa125d462e2887003d041c02f8 99 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 70 85 2.7E-22 T 06-07-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 LFZ55_RS22020 fcbe83a5987ddffa1a89c7766605ccf7 95 SMART SM00421 27 84 1.1E-6 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS22020 fcbe83a5987ddffa1a89c7766605ccf7 95 SUPERFAMILY SSF46894 22 85 6.8E-12 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS22020 fcbe83a5987ddffa1a89c7766605ccf7 95 Pfam PF00196 Bacterial regulatory proteins, luxR family 30 83 1.8E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS22020 fcbe83a5987ddffa1a89c7766605ccf7 95 Gene3D G3DSA:1.10.10.10 27 86 7.4E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13640 84f6b04e3e91cf1d9f9ffce634676e11 161 Pfam PF07813 LTXXQ motif family protein 46 141 2.7E-22 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 LFZ55_RS13640 84f6b04e3e91cf1d9f9ffce634676e11 161 PIRSF PIRSF034445 1 152 4.4E-29 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 Gene3D G3DSA:3.90.1150.10 281 393 9.5E-19 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 3.1E-222 T 06-07-2017 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 SUPERFAMILY SSF53383 5 397 1.99E-107 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 Gene3D G3DSA:3.40.640.10 32 280 1.9E-76 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LFZ55_RS04520 b9b1198d07edf6b0d17e27c3055920ae 401 Pfam PF00266 Aminotransferase class-V 21 388 7.4E-138 T 06-07-2017 IPR000192 Aminotransferase class V domain LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 SUPERFAMILY SSF51604 95 357 6.16E-71 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 SUPERFAMILY SSF54826 1 112 4.98E-33 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 SMART SM00922 125 230 6.4E-18 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 06-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 Gene3D G3DSA:3.20.20.120 116 349 5.0E-77 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 2.1E-30 T 06-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 Pfam PF13378 Enolase C-terminal domain-like 139 355 2.6E-52 T 06-07-2017 IPR029065 Enolase C-terminal domain-like LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.932 T 06-07-2017 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 LFZ55_RS00075 eda0174499218646315ec420d181ac68 382 Gene3D G3DSA:3.30.390.10 1 115 1.8E-54 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LFZ55_RS06600 28c87a6326196ea5c3973fc4b804dd24 293 Pfam PF03837 RecT family 36 194 6.9E-26 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 LFZ55_RS06355 28c87a6326196ea5c3973fc4b804dd24 293 Pfam PF03837 RecT family 36 194 6.9E-26 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 LFZ55_RS11005 5774ba131cb123866de7b464814c0b4e 302 Gene3D G3DSA:3.90.550.10 9 282 4.4E-70 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS11005 5774ba131cb123866de7b464814c0b4e 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.9E-116 T 06-07-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LFZ55_RS11005 5774ba131cb123866de7b464814c0b4e 302 SUPERFAMILY SSF53448 9 291 9.01E-63 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS11005 5774ba131cb123866de7b464814c0b4e 302 Pfam PF00483 Nucleotidyl transferase 10 276 6.7E-26 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS24875 a5ad1c33b6abc3ce75df30c1dedf4353 212 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 94 196 1.3E-19 T 06-07-2017 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC LFZ55_RS24875 a5ad1c33b6abc3ce75df30c1dedf4353 212 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 93 205 1.6E-38 T 06-07-2017 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup LFZ55_RS05460 cff0768ad94bc535add5c61b16e75da8 466 Pfam PF00324 Amino acid permease 18 453 5.4E-124 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS05460 cff0768ad94bc535add5c61b16e75da8 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 6.4E-250 T 06-07-2017 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 LFZ55_RS05460 cff0768ad94bc535add5c61b16e75da8 466 PIRSF PIRSF006060 1 463 1.5E-72 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS05460 cff0768ad94bc535add5c61b16e75da8 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 Pfam PF13185 GAF domain 243 352 5.2E-7 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 SUPERFAMILY SSF55874 424 557 8.89E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 Pfam PF06580 Histidine kinase 371 448 1.4E-25 T 06-07-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 2.0E-59 T 06-07-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 Gene3D G3DSA:3.30.450.40 245 357 5.5E-5 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 SMART SM00065 218 365 5.6E-13 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 SUPERFAMILY SSF55781 243 359 1.96E-8 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS08475 c3583a883de9d6b772fb58773ab9c93a 561 Gene3D G3DSA:3.30.565.10 422 559 2.2E-12 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS14680 765c5fbea58cd6ebdeb8eca1d4a322f7 89 Pfam PF05488 PAAR motif 10 80 3.6E-18 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS12730 a266dd64d4cf3f8740d9ee31f41844a6 300 Gene3D G3DSA:3.40.190.120 126 238 2.6E-34 T 06-07-2017 LFZ55_RS12730 a266dd64d4cf3f8740d9ee31f41844a6 300 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 295 7.8E-67 T 06-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LFZ55_RS12730 a266dd64d4cf3f8740d9ee31f41844a6 300 SUPERFAMILY SSF53850 25 299 1.47E-61 T 06-07-2017 LFZ55_RS12730 a266dd64d4cf3f8740d9ee31f41844a6 300 Gene3D G3DSA:3.40.190.10 21 125 2.7E-52 T 06-07-2017 LFZ55_RS12730 a266dd64d4cf3f8740d9ee31f41844a6 300 Gene3D G3DSA:3.40.190.10 244 300 2.7E-52 T 06-07-2017 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 Gene3D G3DSA:3.40.640.10 58 269 1.6E-85 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 Gene3D G3DSA:3.90.1150.10 270 381 3.8E-31 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 1.2E-140 T 06-07-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 SUPERFAMILY SSF53383 3 381 4.92E-107 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 Pfam PF00155 Aminotransferase class I and II 40 379 5.3E-62 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS16630 1178f4dd329f8bd890baaaf093541984 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 48.265 T 06-07-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 270 340 4.8E-11 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 SUPERFAMILY SSF101801 267 340 1.44E-12 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 PRINTS PR00956 Flagellar motor switch protein FliN signature 316 331 2.9E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 PRINTS PR00956 Flagellar motor switch protein FliN signature 287 303 2.9E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 PRINTS PR00956 Flagellar motor switch protein FliN signature 270 286 2.9E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS18850 0c27778fc3eccbf23b4dc6d85baf3a58 342 Gene3D G3DSA:2.30.330.10 268 340 1.5E-13 T 06-07-2017 LFZ55_RS08085 7e44f59b3d51b9072a07f65cc9058c1b 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.6E-106 T 06-07-2017 IPR024588 Inner membrane protein YejM, N-terminal LFZ55_RS08085 7e44f59b3d51b9072a07f65cc9058c1b 586 Gene3D G3DSA:3.40.720.10 261 520 9.0E-32 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS08085 7e44f59b3d51b9072a07f65cc9058c1b 586 SUPERFAMILY SSF53649 257 580 2.09E-54 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS08085 7e44f59b3d51b9072a07f65cc9058c1b 586 Pfam PF00884 Sulfatase 260 500 3.5E-30 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS08085 7e44f59b3d51b9072a07f65cc9058c1b 586 PIRSF PIRSF004950 6 586 2.2E-230 T 06-07-2017 IPR012159 Inner membrane protein YejM LFZ55_RS05325 3993e3aabed3e2f31532d0513bc0b158 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 228.433 T 06-07-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS05325 3993e3aabed3e2f31532d0513bc0b158 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 5.8E-173 T 06-07-2017 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS05325 3993e3aabed3e2f31532d0513bc0b158 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 3.1E-286 T 06-07-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS05325 3993e3aabed3e2f31532d0513bc0b158 518 SUPERFAMILY SSF55931 4 514 7.19E-204 T 06-07-2017 LFZ55_RS23780 d9f22e2f260ad788f407174cabc3d4c9 452 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 443 4.7E-258 T 06-07-2017 LFZ55_RS23780 d9f22e2f260ad788f407174cabc3d4c9 452 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 41.61 T 06-07-2017 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 Pfam PF07690 Major Facilitator Superfamily 36 404 2.2E-58 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 Gene3D G3DSA:1.20.1250.20 249 440 5.9E-27 T 06-07-2017 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 PIRSF PIRSF002808 7 444 1.9E-35 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 38 438 2.7E-143 T 06-07-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 Gene3D G3DSA:1.20.1250.20 26 213 1.8E-47 T 06-07-2017 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 420 6.1E-124 T 06-07-2017 LFZ55_RS00080 b80968788b8bf00f042d1679c4f91bf7 445 SUPERFAMILY SSF103473 22 441 1.83E-84 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08555 a3b34c2025207e391b8c0e0102520e03 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 2.1E-58 T 06-07-2017 IPR005502 ADP-ribosylation/Crystallin J1 LFZ55_RS08555 a3b34c2025207e391b8c0e0102520e03 334 SUPERFAMILY SSF101478 4 325 8.24E-68 T 06-07-2017 IPR005502 ADP-ribosylation/Crystallin J1 LFZ55_RS01205 47bbd8f62c1e68fd02b502a0bd62669e 77 PIRSF PIRSF500176 1 77 1.8E-5 T 06-07-2017 LFZ55_RS01205 47bbd8f62c1e68fd02b502a0bd62669e 77 SUPERFAMILY SSF53774 1 76 1.57E-13 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS01205 47bbd8f62c1e68fd02b502a0bd62669e 77 Gene3D G3DSA:3.40.50.40 1 77 7.4E-21 T 06-07-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 LFZ55_RS01205 47bbd8f62c1e68fd02b502a0bd62669e 77 PIRSF PIRSF001220 1 77 2.3E-6 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LFZ55_RS00220 2c5d6e42639127f30b0843e9f4bd29a4 344 Gene3D G3DSA:3.20.20.80 46 295 3.2E-25 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS00220 2c5d6e42639127f30b0843e9f4bd29a4 344 SUPERFAMILY SSF51445 28 301 7.78E-34 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS00220 2c5d6e42639127f30b0843e9f4bd29a4 344 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 46 246 3.8E-10 T 06-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 LFZ55_RS13940 73ffd10167cf003ed2ffafc5905e7fb3 196 SUPERFAMILY SSF52540 2 193 3.55E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13940 73ffd10167cf003ed2ffafc5905e7fb3 196 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS13940 73ffd10167cf003ed2ffafc5905e7fb3 196 Gene3D G3DSA:3.40.50.300 1 193 1.3E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13940 73ffd10167cf003ed2ffafc5905e7fb3 196 SMART SM00382 26 196 4.9E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS13940 73ffd10167cf003ed2ffafc5905e7fb3 196 Pfam PF00005 ABC transporter 18 150 6.9E-17 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS00715 c0c558c1048e9cba2ead13746405e053 320 Gene3D G3DSA:3.20.20.370 13 248 9.9E-111 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS00715 c0c558c1048e9cba2ead13746405e053 320 SUPERFAMILY SSF88713 24 238 1.33E-73 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS00715 c0c558c1048e9cba2ead13746405e053 320 Pfam PF04748 Divergent polysaccharide deacetylase 28 237 8.7E-77 T 06-07-2017 IPR006837 Divergent polysaccharide deacetylase LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 191 9.3E-13 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 SUPERFAMILY SSF56784 7 216 6.24E-49 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 5.9E-5 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 5.9E-5 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.9E-5 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 7.1E-22 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 Gene3D G3DSA:1.10.150.240 21 91 2.1E-37 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 Gene3D G3DSA:3.40.50.1000 95 215 2.8E-37 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS13565 a224b3eee1bd98c6aa8dc0ad1af08727 222 Gene3D G3DSA:3.40.50.1000 2 20 2.8E-37 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 Pfam PF00106 short chain dehydrogenase 3 197 1.3E-48 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 Gene3D G3DSA:3.40.50.720 2 256 1.3E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 SUPERFAMILY SSF51735 2 258 3.66E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.2E-19 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.2E-19 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-19 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.2E-19 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS05230 55c13a285b222896457db885295b08b9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.2E-19 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS02855 4b20589624cf2422133b5261a4c03c0a 105 SMART SM00465 7 86 7.5E-4 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS02855 4b20589624cf2422133b5261a4c03c0a 105 SUPERFAMILY SSF82771 8 77 1.57E-11 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS02855 4b20589624cf2422133b5261a4c03c0a 105 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 6 97 31.383 T 06-07-2017 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease LFZ55_RS02855 4b20589624cf2422133b5261a4c03c0a 105 Pfam PF01541 GIY-YIG catalytic domain 9 80 1.4E-13 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 1.7E-36 T 06-07-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 Gene3D G3DSA:3.40.50.720 8 167 1.0E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 SUPERFAMILY SSF51735 8 169 3.78E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 Gene3D G3DSA:1.10.1040.10 171 293 1.4E-46 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 PIRSF PIRSF000103 2 296 1.3E-58 T 06-07-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 165 2.0E-37 T 06-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 SUPERFAMILY SSF48179 171 294 2.27E-38 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS04860 676bc11a973f3e04673e772de8233aae 307 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 06-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 SMART SM00411 3 92 1.2E-43 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 06-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 06-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LFZ55_RS13485 44cfa036ca90598059a463ab466dff56 99 Gene3D G3DSA:4.10.520.10 2 93 3.4E-36 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS22220 0d9d279b74c96ca8369887e49ee84a45 144 SUPERFAMILY SSF55729 5 136 2.53E-26 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS22220 0d9d279b74c96ca8369887e49ee84a45 144 Pfam PF00583 Acetyltransferase (GNAT) family 54 133 4.1E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS22220 0d9d279b74c96ca8369887e49ee84a45 144 Gene3D G3DSA:3.40.630.30 5 143 6.7E-31 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS13715 f9d89df6e9d83ea266ef588af360e968 183 PIRSF PIRSF000232 1 182 6.9E-68 T 06-07-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like LFZ55_RS13715 f9d89df6e9d83ea266ef588af360e968 183 Gene3D G3DSA:3.40.109.10 1 168 6.0E-38 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS13715 f9d89df6e9d83ea266ef588af360e968 183 Pfam PF00881 Nitroreductase family 9 161 9.3E-23 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LFZ55_RS13715 f9d89df6e9d83ea266ef588af360e968 183 SUPERFAMILY SSF55469 1 168 7.33E-36 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 Gene3D G3DSA:2.60.40.1180 526 567 4.6E-8 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 SMART SM00642 127 521 4.3E-82 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 SUPERFAMILY SSF51445 117 530 3.8E-88 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 Pfam PF00128 Alpha amylase, catalytic domain 177 493 5.5E-83 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 104 6.5E-6 T 06-07-2017 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 PIRSF PIRSF036918 1 604 9.8E-233 T 06-07-2017 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 SUPERFAMILY SSF51011 530 603 1.75E-11 T 06-07-2017 LFZ55_RS18430 d9c52f7334c2870b512d5f26488b61f7 605 Gene3D G3DSA:3.20.20.80 117 522 3.8E-104 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 Pfam PF01204 Trehalase 70 546 9.8E-164 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 81.851 T 06-07-2017 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 SUPERFAMILY SSF48208 55 547 1.11E-149 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 06-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 06-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS01190 e706875af45829877be93efb04689db5 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 2.2E-45 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS21555 c8bb8bd79a88a74c3e23bfeed4f0e7b4 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 2.7E-22 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LFZ55_RS21555 c8bb8bd79a88a74c3e23bfeed4f0e7b4 206 Gene3D G3DSA:3.10.50.40 89 205 4.0E-50 T 06-07-2017 LFZ55_RS21555 c8bb8bd79a88a74c3e23bfeed4f0e7b4 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.3E-27 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LFZ55_RS21555 c8bb8bd79a88a74c3e23bfeed4f0e7b4 206 SUPERFAMILY SSF54534 8 205 1.96E-55 T 06-07-2017 LFZ55_RS21555 c8bb8bd79a88a74c3e23bfeed4f0e7b4 206 Gene3D G3DSA:1.10.287.460 3 88 1.5E-24 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 SUPERFAMILY SSF51905 161 332 4.41E-11 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 SUPERFAMILY SSF51905 1 221 3.3E-18 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 333 8.1E-114 T 06-07-2017 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 Gene3D G3DSA:3.50.50.60 84 186 1.1E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 Gene3D G3DSA:3.50.50.60 187 223 7.5E-7 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15155 d37936f9ce116068a0438d541c65b3c4 444 Gene3D G3DSA:3.50.50.60 276 331 7.5E-7 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 SMART SM00342 162 244 9.3E-28 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 Gene3D G3DSA:1.10.10.60 197 247 8.6E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.8E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.8E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 Pfam PF12833 Helix-turn-helix domain 169 244 8.8E-14 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 SUPERFAMILY SSF46689 197 248 1.36E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22120 dbb75c5fdf0b59c290c4ff1fbdb9a070 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 SUPERFAMILY SSF52980 820 1120 7.51E-96 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 06-07-2017 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 SUPERFAMILY SSF52540 1 346 1.38E-127 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 SUPERFAMILY SSF52540 363 812 5.74E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 Gene3D G3DSA:3.40.50.300 657 752 2.1E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 Gene3D G3DSA:3.40.50.300 337 455 2.1E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 PIRSF PIRSF000980 1 1123 0.0 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.235 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LFZ55_RS04460 0aaf802d74c42452f83e3ff9af84a4bc 1123 Gene3D G3DSA:1.10.10.160 86 182 1.6E-33 T 06-07-2017 IPR013986 DExx box DNA helicase domain LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 SUPERFAMILY SSF51735 164 349 7.75E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 SUPERFAMILY SSF50129 1 200 8.07E-60 T 06-07-2017 IPR011032 GroES-like LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 9.2E-13 T 06-07-2017 IPR027399 Alcohol dehydrogenase GroES-associated LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 Gene3D G3DSA:3.40.50.720 189 330 6.7E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 151 3.6E-30 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 Gene3D G3DSA:3.90.180.10 1 188 1.1E-55 T 06-07-2017 IPR011032 GroES-like LFZ55_RS17500 0905653d00ada80a0a114f6b5cd77465 412 Pfam PF00107 Zinc-binding dehydrogenase 197 268 8.5E-10 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS20085 6a8fd34b34b1fc3b6a1c97d38398e466 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 2.0E-70 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS20085 6a8fd34b34b1fc3b6a1c97d38398e466 304 SUPERFAMILY SSF53590 3 300 1.22E-95 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS20085 6a8fd34b34b1fc3b6a1c97d38398e466 304 Gene3D G3DSA:3.90.245.10 3 301 1.8E-101 T 06-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LFZ55_RS20085 6a8fd34b34b1fc3b6a1c97d38398e466 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 68.286 T 06-07-2017 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 Gene3D G3DSA:3.30.910.20 11 57 1.5E-34 T 06-07-2017 LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 Gene3D G3DSA:3.30.910.20 92 161 1.5E-34 T 06-07-2017 LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 SMART SM00935 10 161 9.0E-39 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 Pfam PF03938 Outer membrane protein (OmpH-like) 8 159 7.7E-29 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 SUPERFAMILY SSF111384 20 160 1.57E-31 T 06-07-2017 IPR024930 Skp domain LFZ55_RS19265 d24d7a7ec47f1c9295a55f39e5b3e3de 161 PIRSF PIRSF002094 1 161 7.6E-49 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 LFZ55_RS00310 f1527640672a4e087ef42fca29bcf389 397 Gene3D G3DSA:1.20.1250.20 21 203 1.6E-24 T 06-07-2017 LFZ55_RS00310 f1527640672a4e087ef42fca29bcf389 397 Gene3D G3DSA:1.20.1250.20 216 388 1.0E-8 T 06-07-2017 LFZ55_RS00310 f1527640672a4e087ef42fca29bcf389 397 Pfam PF07690 Major Facilitator Superfamily 25 360 1.8E-32 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00310 f1527640672a4e087ef42fca29bcf389 397 SUPERFAMILY SSF103473 14 392 5.75E-50 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Gene3D G3DSA:1.10.540.10 1 110 7.1E-19 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 SUPERFAMILY SSF47203 226 379 1.51E-45 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Gene3D G3DSA:1.20.140.10 216 380 6.7E-50 T 06-07-2017 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 SUPERFAMILY SSF56645 1 227 3.8E-50 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 3.8E-20 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Gene3D G3DSA:2.40.110.10 123 215 7.5E-22 T 06-07-2017 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 9.5E-15 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 90.965 T 06-07-2017 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA GO:0009437|GO:0016627|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LFZ55_RS20015 116c60b839b6d1b1db68c4ec3c8101d5 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 2.8E-45 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 SUPERFAMILY SSF56601 250 611 5.63E-86 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 Gene3D G3DSA:3.90.1310.10 125 248 4.7E-39 T 06-07-2017 LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 607 2.0E-70 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 233 5.1E-46 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 SUPERFAMILY SSF56519 53 249 2.88E-51 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 Gene3D G3DSA:3.40.710.10 249 612 4.4E-95 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS09885 a52109cfe235741cee5fe2b7c639e484 623 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 611 5.2E-223 T 06-07-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 58.154 T 06-07-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 Gene3D G3DSA:3.40.309.10 257 448 2.6E-43 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 Pfam PF00171 Aldehyde dehydrogenase family 9 457 3.7E-117 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 7.1E-253 T 06-07-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 Gene3D G3DSA:3.40.605.10 3 256 1.2E-73 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS13660 0442681e0225576f9815ed69d750ae09 492 SUPERFAMILY SSF53720 3 455 1.57E-120 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS03660 f11b792e6d02d717b0c7774b45fe8a04 280 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 222 1.1E-34 T 06-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LFZ55_RS03660 f11b792e6d02d717b0c7774b45fe8a04 280 SUPERFAMILY SSF51621 7 233 9.77E-62 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS03660 f11b792e6d02d717b0c7774b45fe8a04 280 Gene3D G3DSA:3.20.20.60 6 233 1.5E-66 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS03660 f11b792e6d02d717b0c7774b45fe8a04 280 PIRSF PIRSF015582 1 280 3.8E-77 T 06-07-2017 IPR011206 Citrate lyase beta subunit-like LFZ55_RS14760 dbf5ca820eb07322bba2d1a8e10dcfa6 81 Gene3D G3DSA:3.30.420.10 2 63 6.0E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS14760 dbf5ca820eb07322bba2d1a8e10dcfa6 81 Pfam PF13683 Integrase core domain 2 63 5.9E-28 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS14760 dbf5ca820eb07322bba2d1a8e10dcfa6 81 SUPERFAMILY SSF53098 3 70 2.43E-15 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS08270 66a620d9a94680faca208367cc8c9e6f 440 Gene3D G3DSA:1.20.1250.20 24 222 5.9E-46 T 06-07-2017 LFZ55_RS08270 66a620d9a94680faca208367cc8c9e6f 440 SUPERFAMILY SSF103473 19 436 1.19E-67 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS08270 66a620d9a94680faca208367cc8c9e6f 440 Pfam PF07690 Major Facilitator Superfamily 37 400 1.2E-41 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS08270 66a620d9a94680faca208367cc8c9e6f 440 Gene3D G3DSA:1.20.1250.20 248 434 2.9E-27 T 06-07-2017 LFZ55_RS08270 66a620d9a94680faca208367cc8c9e6f 440 PIRSF PIRSF002808 9 439 9.2E-104 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 SUPERFAMILY SSF52425 3 198 1.7E-55 T 06-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 06-07-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 Gene3D G3DSA:3.40.50.620 3 163 2.3E-47 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 SUPERFAMILY SSF48173 194 471 1.31E-106 T 06-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 PRINTS PR00147 DNA photolyase signature 143 159 1.8E-32 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 PRINTS PR00147 DNA photolyase signature 343 361 1.8E-32 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 PRINTS PR00147 DNA photolyase signature 323 339 1.8E-32 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 PRINTS PR00147 DNA photolyase signature 382 396 1.8E-32 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 Pfam PF03441 FAD binding domain of DNA photolyase 273 467 1.6E-83 T 06-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 Gene3D G3DSA:1.10.579.10 281 470 4.5E-79 T 06-07-2017 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 Pfam PF00875 DNA photolyase 5 170 1.7E-45 T 06-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 06-07-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LFZ55_RS17055 38e6df0ea268ba34b4d8f1c8830b80b1 473 Gene3D G3DSA:1.25.40.80 202 280 2.9E-37 T 06-07-2017 LFZ55_RS23610 bfa9d6da4c646080539843bf20452ef6 42 Pfam PF02810 SEC-C motif 23 41 7.7E-12 T 06-07-2017 IPR004027 SEC-C motif LFZ55_RS23610 bfa9d6da4c646080539843bf20452ef6 42 Gene3D G3DSA:3.10.450.50 8 41 1.8E-13 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS23610 bfa9d6da4c646080539843bf20452ef6 42 SUPERFAMILY SSF103642 21 41 8.34E-10 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Gene3D G3DSA:3.30.9.10 171 276 1.2E-12 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Gene3D G3DSA:3.30.9.10 330 357 1.2E-12 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Pfam PF01494 FAD binding domain 7 345 9.3E-83 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 SUPERFAMILY SSF51905 270 353 3.5E-61 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 SUPERFAMILY SSF51905 7 180 3.5E-61 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Gene3D G3DSA:3.40.30.20 450 497 2.1E-6 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 SUPERFAMILY SSF52833 378 500 2.24E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Gene3D G3DSA:3.50.50.60 281 320 1.7E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 Gene3D G3DSA:3.50.50.60 3 170 1.7E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 6.0E-37 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 6.0E-37 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 6.0E-37 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.0E-37 T 06-07-2017 LFZ55_RS12430 82ab22cd8d672a86abfef7bf0c5c018f 505 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 6.0E-37 T 06-07-2017 LFZ55_RS06780 9bd146c5617d48b561818f4fd8203e22 156 Gene3D G3DSA:3.40.30.10 2 154 2.7E-51 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS06780 9bd146c5617d48b561818f4fd8203e22 156 Pfam PF00578 AhpC/TSA family 7 134 3.7E-39 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS06780 9bd146c5617d48b561818f4fd8203e22 156 PIRSF PIRSF000239 1 153 8.9E-18 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 LFZ55_RS06780 9bd146c5617d48b561818f4fd8203e22 156 SUPERFAMILY SSF52833 3 154 1.92E-50 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 SMART SM00475 24 271 5.4E-103 T 06-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 SUPERFAMILY SSF47807 181 264 1.64E-23 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 SUPERFAMILY SSF88723 25 180 3.02E-38 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 26 173 3.6E-27 T 06-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 SMART SM00279 183 218 5.9E-10 T 06-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 Hamap MF_01192 Flap endonuclease Xni [xni]. 23 272 45.395 T 06-07-2017 IPR022895 Flap endonuclease Xni GO:0048256 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 181 270 2.5E-25 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 Gene3D G3DSA:1.10.150.20 196 256 8.3E-25 T 06-07-2017 LFZ55_RS04580 104510617d4fc9cfd219c95151fa3ac3 272 Gene3D G3DSA:3.40.50.1010 25 195 1.8E-47 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 Gene3D G3DSA:3.10.180.10 1 127 8.8E-48 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.8E-24 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 06-07-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 SUPERFAMILY SSF54593 1 130 3.22E-35 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.6E-68 T 06-07-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 LFZ55_RS13040 c4a899bdbe6f3907641e0df804af3c2d 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 06-07-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 SUPERFAMILY SSF103473 18 400 5.62E-55 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 Pfam PF07690 Major Facilitator Superfamily 25 366 3.1E-39 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 289 310 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 145 167 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 173 193 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 115 136 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 31 47 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 88 112 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 350 373 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 PRINTS PR01035 Tetracycline resistance protein signature 261 281 1.6E-19 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 Gene3D G3DSA:1.20.1250.20 218 398 2.1E-14 T 06-07-2017 LFZ55_RS12435 6e673faa2f6d51a2b09a15addf7a82f2 413 Gene3D G3DSA:1.20.1250.20 19 197 2.3E-34 T 06-07-2017 LFZ55_RS02245 87a4ed745ca5b3b5ce7e34738d900b78 184 Gene3D G3DSA:2.160.10.10 6 176 2.2E-44 T 06-07-2017 LFZ55_RS02245 87a4ed745ca5b3b5ce7e34738d900b78 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 9.8E-5 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS02245 87a4ed745ca5b3b5ce7e34738d900b78 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.6E-7 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS02245 87a4ed745ca5b3b5ce7e34738d900b78 184 SUPERFAMILY SSF51161 5 176 1.26E-43 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 SMART SM00448 2 111 6.6E-46 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 SUPERFAMILY SSF52172 2 188 9.96E-42 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.6E-21 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 Gene3D G3DSA:3.40.50.2300 2 125 3.2E-41 T 06-07-2017 LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 SMART SM00862 152 228 2.1E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 Gene3D G3DSA:1.10.10.10 130 229 1.2E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23160 46298e82821691bdef777d2592646da6 232 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS12725 d0befce235d2d8ffe78507da9486ff8d 236 Gene3D G3DSA:1.10.3720.10 45 233 9.6E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS12725 d0befce235d2d8ffe78507da9486ff8d 236 SUPERFAMILY SSF161098 40 223 6.93E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS12725 d0befce235d2d8ffe78507da9486ff8d 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 234 1.6E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 3.0E-22 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Pfam PF00501 AMP-binding enzyme 59 500 3.2E-78 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Gene3D G3DSA:3.40.50.980 241 397 1.2E-26 T 06-07-2017 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 5.0E-21 T 06-07-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 06-07-2017 IPR020845 AMP-binding, conserved site LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Gene3D G3DSA:3.40.50.980 54 240 7.6E-34 T 06-07-2017 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Gene3D G3DSA:3.30.300.30 495 606 6.2E-25 T 06-07-2017 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 SUPERFAMILY SSF56801 4 619 1.96E-154 T 06-07-2017 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 Gene3D G3DSA:2.30.38.10 413 494 1.1E-5 T 06-07-2017 LFZ55_RS18580 6ca72563563ea86d0221c9193e0c7ba0 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 628 0.0 T 06-07-2017 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Pfam PF06480 FtsH Extracellular 5 93 6.8E-17 T 06-07-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 SMART SM00382 184 323 1.9E-26 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Gene3D G3DSA:1.10.8.60 332 406 1.6E-28 T 06-07-2017 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Pfam PF01434 Peptidase family M41 382 591 6.4E-83 T 06-07-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 SUPERFAMILY SSF140990 402 602 3.79E-73 T 06-07-2017 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Gene3D G3DSA:3.40.50.300 144 331 2.9E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 SUPERFAMILY SSF52540 141 391 4.46E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 4.1E-248 T 06-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.46 T 06-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LFZ55_RS02745 b978ec6a169d084e9b9c5a324e66eedf 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 06-07-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.5E-11 T 06-07-2017 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.5E-11 T 06-07-2017 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 SUPERFAMILY SSF51905 5 255 1.12E-73 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 SUPERFAMILY SSF51905 356 446 1.12E-73 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 1.3E-232 T 06-07-2017 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 SUPERFAMILY SSF46977 425 524 8.24E-32 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 3.5E-5 T 06-07-2017 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.5E-5 T 06-07-2017 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Pfam PF00890 FAD binding domain 10 392 2.4E-103 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Gene3D G3DSA:1.20.58.100 421 522 3.2E-35 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 SUPERFAMILY SSF56425 238 353 6.58E-41 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 2.5E-14 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Gene3D G3DSA:3.90.700.10 244 348 1.9E-37 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Gene3D G3DSA:3.50.50.60 4 243 2.1E-99 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS05945 a5f2e5814a36ba19a1f95accf28ec1f9 540 Gene3D G3DSA:3.50.50.60 349 408 2.1E-99 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS15140 3dee59b7e077a7b8f63ef3d110c893bb 595 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 575 6.3E-28 T 06-07-2017 IPR022770 Ferric iron reductase FhuF domain LFZ55_RS15140 3dee59b7e077a7b8f63ef3d110c893bb 595 Pfam PF04183 IucA / IucC family 157 386 5.1E-50 T 06-07-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 PIRSF PIRSF006305 1 193 1.7E-44 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 SUPERFAMILY SSF52972 1 185 7.85E-62 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.321 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 Pfam PF02545 Maf-like protein 3 186 5.0E-47 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 3.3E-68 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 LFZ55_RS14320 a14a46ce164a725538ffd82d283a09de 194 Gene3D G3DSA:3.90.950.10 2 188 8.3E-62 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LFZ55_RS10370 6f2bcc525bb2a3c884c8d9e2d915b652 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 31.575 T 06-07-2017 IPR009328 Protein of unknown function DUF986 LFZ55_RS10370 6f2bcc525bb2a3c884c8d9e2d915b652 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 148 2.0E-68 T 06-07-2017 IPR009328 Protein of unknown function DUF986 LFZ55_RS10370 6f2bcc525bb2a3c884c8d9e2d915b652 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 4.2E-62 T 06-07-2017 IPR009328 Protein of unknown function DUF986 LFZ55_RS10370 6f2bcc525bb2a3c884c8d9e2d915b652 152 PIRSF PIRSF020687 1 152 2.8E-67 T 06-07-2017 IPR009328 Protein of unknown function DUF986 LFZ55_RS09260 3ca1863cb1f41432801b1a3d780e306d 215 Pfam PF12834 Phage integrase, N-terminal 1 91 1.5E-38 T 06-07-2017 IPR024457 Putative integrase, N-terminal LFZ55_RS09260 3ca1863cb1f41432801b1a3d780e306d 215 Pfam PF12835 Integrase 102 196 4.7E-34 T 06-07-2017 IPR024456 Integrase catalytic domain, putative LFZ55_RS09260 3ca1863cb1f41432801b1a3d780e306d 215 SUPERFAMILY SSF56349 18 209 3.18E-12 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS09260 3ca1863cb1f41432801b1a3d780e306d 215 Gene3D G3DSA:1.10.150.130 12 92 1.6E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal LFZ55_RS15990 85e249a0cfa59e13429089dc85028ccb 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 2.6E-24 T 06-07-2017 IPR024289 Domain of unknown function DUF3828 LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 SMART SM00490 266 345 4.7E-10 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 Gene3D G3DSA:3.40.50.300 238 355 9.9E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.8E-13 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 SUPERFAMILY SSF57829 424 465 1.28E-6 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 2.9E-24 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 SUPERFAMILY SSF52540 237 363 2.46E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 SUPERFAMILY SSF52540 50 169 2.46E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 SMART SM00487 1 192 2.2E-19 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS08105 c4c3b2b90b1fa8e1013c8cec6e371845 586 Gene3D G3DSA:3.40.50.300 3 155 1.2E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 9.8E-29 T 06-07-2017 IPR018076 Type II secretion system F domain LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 Pfam PF00482 Type II secretion system (T2SS), protein F 268 388 4.2E-23 T 06-07-2017 IPR018076 Type II secretion system F domain LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 3.2E-12 T 06-07-2017 IPR003004 GspF/PilC family LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 3.2E-12 T 06-07-2017 IPR003004 GspF/PilC family LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 3.2E-12 T 06-07-2017 IPR003004 GspF/PilC family LFZ55_RS19650 afcb1c7c8949f4dc17b5d878bb7a6187 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 3.2E-12 T 06-07-2017 IPR003004 GspF/PilC family LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 19 353 2.4E-153 T 06-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 SUPERFAMILY SSF54862 176 322 4.06E-18 T 06-07-2017 LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 12 320 50.931 T 06-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 Pfam PF08331 Domain of unknown function (DUF1730) 67 145 5.2E-24 T 06-07-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 Gene3D G3DSA:3.30.70.20 195 263 2.7E-6 T 06-07-2017 LFZ55_RS21755 fa7786d6abfa895edeb41e3b5ab21b18 384 Pfam PF13484 4Fe-4S double cluster binding domain 198 261 5.7E-19 T 06-07-2017 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 Gene3D G3DSA:1.10.10.10 3 43 3.9E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 SMART SM00420 8 59 0.0014 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 SMART SM01134 76 237 7.6E-40 T 06-07-2017 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 SUPERFAMILY SSF100950 85 237 1.67E-12 T 06-07-2017 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 Pfam PF08220 DeoR-like helix-turn-helix domain 8 44 2.3E-8 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS00265 b3ad114c87ff39370cc8a56a52149c98 261 Pfam PF00455 DeoR C terminal sensor domain 85 236 3.0E-30 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 PIRSF PIRSF002741 39 581 1.4E-114 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 126 147 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 Gene3D G3DSA:3.40.190.10 198 348 1.5E-58 T 06-07-2017 LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 Gene3D G3DSA:3.10.105.10 349 550 4.5E-63 T 06-07-2017 LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 SUPERFAMILY SSF53850 74 564 2.17E-148 T 06-07-2017 LFZ55_RS11035 f6c0a8bed2d8afd9efcd6b7e121ecac9 582 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 121 502 5.4E-91 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS18190 4530a46744797fd292de35b8bc028f14 132 Gene3D G3DSA:3.10.129.10 2 131 8.2E-45 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS18190 4530a46744797fd292de35b8bc028f14 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 2.6E-36 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LFZ55_RS18190 4530a46744797fd292de35b8bc028f14 132 Pfam PF13279 Thioesterase-like superfamily 11 126 9.8E-17 T 06-07-2017 LFZ55_RS18190 4530a46744797fd292de35b8bc028f14 132 SUPERFAMILY SSF54637 3 129 5.65E-39 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS18190 4530a46744797fd292de35b8bc028f14 132 PIRSF PIRSF003230 1 132 9.6E-23 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Gene3D G3DSA:3.90.76.10 132 266 2.0E-22 T 06-07-2017 LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Gene3D G3DSA:3.40.190.10 267 309 6.4E-8 T 06-07-2017 LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 3.2E-20 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 SUPERFAMILY SSF53850 121 547 5.79E-63 T 06-07-2017 LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 552 64.814 T 06-07-2017 IPR023767 Transcriptional regulator SgrR LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Gene3D G3DSA:1.10.10.10 21 68 2.4E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 2.4E-42 T 06-07-2017 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LFZ55_RS19850 3c18d9640379e26168647d106770a60c 552 SUPERFAMILY SSF46785 22 68 6.62E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06345 4597e34914ea2419d606dd78e24203fd 85 Pfam PF06069 PerC transcriptional activator 34 79 5.2E-5 T 06-07-2017 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 LFZ55_RS06590 4597e34914ea2419d606dd78e24203fd 85 Pfam PF06069 PerC transcriptional activator 34 79 5.2E-5 T 06-07-2017 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 LFZ55_RS21905 aa574dbfdbd92dd41c4f4b937c5b1996 115 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 115 41.407 T 06-07-2017 IPR023700 Divalent cation tolerance protein CutA, bacteria GO:0005507|GO:0005737 LFZ55_RS21905 aa574dbfdbd92dd41c4f4b937c5b1996 115 Gene3D G3DSA:3.30.70.830 5 114 1.5E-40 T 06-07-2017 LFZ55_RS21905 aa574dbfdbd92dd41c4f4b937c5b1996 115 Pfam PF03091 CutA1 divalent ion tolerance protein 15 112 4.6E-34 T 06-07-2017 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 LFZ55_RS21905 aa574dbfdbd92dd41c4f4b937c5b1996 115 SUPERFAMILY SSF54913 12 114 2.37E-35 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta LFZ55_RS04000 00579e51683f2e7bd62576e5bfb07754 248 Pfam PF04402 Protein of unknown function (DUF541) 30 231 8.6E-45 T 06-07-2017 IPR007497 Protein of unknown function DUF541 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 Pfam PF00813 FliP family 13 210 7.8E-63 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 143 163 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 188 213 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 164 185 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 4.4E-65 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 191 203 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 210 1.0E-86 T 06-07-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 LFZ55_RS13130 0e61439a35bf6d76113b779e986c3a9d 215 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 143 158 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS11440 a0cdbe904f0442aba8179981d676fcf2 262 SUPERFAMILY SSF51658 1 259 4.15E-51 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS11440 a0cdbe904f0442aba8179981d676fcf2 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 217 4.6E-26 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS11440 a0cdbe904f0442aba8179981d676fcf2 262 Gene3D G3DSA:3.20.20.150 1 259 9.0E-51 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS13735 c3d5bbf3495a7017d63e6d2dd6b96621 218 SUPERFAMILY SSF52499 3 209 6.54E-52 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS13735 c3d5bbf3495a7017d63e6d2dd6b96621 218 Gene3D G3DSA:3.40.50.850 2 208 5.1E-65 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS13735 c3d5bbf3495a7017d63e6d2dd6b96621 218 Pfam PF00857 Isochorismatase family 5 207 2.6E-34 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.92 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 Pfam PF01715 IPP transferase 46 290 3.5E-86 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 SUPERFAMILY SSF52540 140 234 7.42E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 SUPERFAMILY SSF52540 12 44 7.42E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 Gene3D G3DSA:1.10.287.890 207 289 1.2E-34 T 06-07-2017 LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 1.5E-123 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 SUPERFAMILY SSF52540 13 157 7.35E-19 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21730 4590a3843867b29d0138448857bb64d1 316 Gene3D G3DSA:3.40.50.300 10 178 7.3E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10520 d54df1b97fed8d2d0e54d7207bd74533 510 Pfam PF04293 SpoVR like protein 19 450 3.6E-178 T 06-07-2017 IPR007390 Sporulation stage V, protein R LFZ55_RS16320 5a834b1e799d0bffbb6c1b68d0039212 416 Pfam PF07690 Major Facilitator Superfamily 26 360 2.1E-29 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS16320 5a834b1e799d0bffbb6c1b68d0039212 416 SUPERFAMILY SSF103473 10 403 6.02E-48 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS16320 5a834b1e799d0bffbb6c1b68d0039212 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS16320 5a834b1e799d0bffbb6c1b68d0039212 416 Gene3D G3DSA:1.20.1250.20 217 403 2.3E-5 T 06-07-2017 LFZ55_RS16320 5a834b1e799d0bffbb6c1b68d0039212 416 Gene3D G3DSA:1.20.1250.20 22 199 2.7E-23 T 06-07-2017 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 SUPERFAMILY SSF51445 2 470 2.0E-166 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 Gene3D G3DSA:3.20.20.80 5 475 4.0E-153 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 3.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 3.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 3.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 3.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 3.9E-16 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 3.6E-132 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 06-07-2017 IPR018120 Glycoside hydrolase family 1, active site LFZ55_RS04105 8d51094bd04c62c980b2cb775a288106 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 06-07-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 Gene3D G3DSA:1.10.10.60 6 58 7.7E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 SUPERFAMILY SSF46689 6 56 3.14E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 Gene3D G3DSA:1.10.10.60 59 109 1.9E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 1.8E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 1.8E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 SMART SM00342 22 105 1.5E-33 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 SUPERFAMILY SSF46689 59 108 2.09E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS17660 5e64cb173aa2218d0d3d170dba5a7bd8 113 Pfam PF12833 Helix-turn-helix domain 28 106 1.9E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 SMART SM00382 28 213 8.2E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 4.1E-120 T 06-07-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.6E-7 T 06-07-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 Gene3D G3DSA:3.40.50.300 3 234 6.4E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 Pfam PF00005 ABC transporter 20 166 1.4E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS02625 e8dc1a2224045a6297299b276c22cefd 241 SUPERFAMILY SSF52540 4 236 1.59E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06155 c7bbf23abe5006b5482eba78a6e25eab 243 Gene3D G3DSA:3.40.1280.10 4 166 6.0E-33 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS06155 c7bbf23abe5006b5482eba78a6e25eab 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 1.2E-95 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS06155 c7bbf23abe5006b5482eba78a6e25eab 243 SUPERFAMILY SSF75217 4 164 2.68E-39 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS06155 c7bbf23abe5006b5482eba78a6e25eab 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.0E-33 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS06155 c7bbf23abe5006b5482eba78a6e25eab 243 PIRSF PIRSF004808 1 243 1.2E-79 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 Gene3D G3DSA:3.40.50.300 8 223 7.7E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.2E-28 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 SMART SM00487 28 234 3.3E-52 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 Gene3D G3DSA:3.40.50.300 224 387 1.3E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.1E-44 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 SUPERFAMILY SSF52540 84 363 9.49E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.894 T 06-07-2017 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 LFZ55_RS23850 0f2c7a2df5e794423678be1c02e559b8 421 SMART SM00490 270 351 2.0E-30 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SUPERFAMILY SSF50249 9 176 3.94E-43 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SUPERFAMILY SSF52540 206 453 1.03E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Gene3D G3DSA:3.40.50.300 255 453 1.1E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SMART SM00490 505 589 6.5E-22 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Gene3D G3DSA:3.40.50.300 454 638 7.7E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 4.1E-19 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Gene3D G3DSA:1.10.150.20 5 37 2.7E-4 T 06-07-2017 LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Gene3D G3DSA:2.40.50.140 47 138 1.0E-30 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 2.4E-251 T 06-07-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SMART SM00487 265 459 6.6E-32 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Pfam PF17191 RecG wedge domain 14 172 8.2E-22 T 06-07-2017 IPR033454 RecG, wedge domain LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SUPERFAMILY SSF52540 508 653 2.6E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 SUPERFAMILY SSF52540 292 342 2.6E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00515 0a0ee552d7098ff348ea097c92f0fa21 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 1.2E-19 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS16775 9867c354cd1c76d1a7fd641ff525eefd 258 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS16775 9867c354cd1c76d1a7fd641ff525eefd 258 Pfam PF00005 ABC transporter 27 164 3.2E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS16775 9867c354cd1c76d1a7fd641ff525eefd 258 SUPERFAMILY SSF52540 6 229 1.82E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16775 9867c354cd1c76d1a7fd641ff525eefd 258 Gene3D G3DSA:3.40.50.300 7 242 7.6E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16775 9867c354cd1c76d1a7fd641ff525eefd 258 SMART SM00382 29 214 1.6E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS21235 6a2bbfd68eb1591432d3fe2913c945fc 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 8.1E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS21235 6a2bbfd68eb1591432d3fe2913c945fc 167 SUPERFAMILY SSF55729 10 167 6.35E-31 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS21235 6a2bbfd68eb1591432d3fe2913c945fc 167 Gene3D G3DSA:3.40.630.30 10 167 1.3E-36 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 411 52.926 T 06-07-2017 IPR022824 Multidrug resistance protein MdtA LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 Gene3D G3DSA:2.40.50.100 194 228 8.9E-23 T 06-07-2017 LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 Gene3D G3DSA:2.40.50.100 85 119 8.9E-23 T 06-07-2017 LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 Pfam PF13437 HlyD family secretion protein 197 301 5.3E-7 T 06-07-2017 LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 SUPERFAMILY SSF111369 78 312 3.14E-53 T 06-07-2017 LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 389 1.3E-77 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS08620 00d30a65c7aea1316d59f76a1d12dc55 413 Pfam PF13533 Biotin-lipoyl like 86 134 2.2E-14 T 06-07-2017 LFZ55_RS09695 9e99a0d13de430d6bfdb030e3aa0b54e 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 06-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LFZ55_RS09695 9e99a0d13de430d6bfdb030e3aa0b54e 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.684 T 06-07-2017 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LFZ55_RS09695 9e99a0d13de430d6bfdb030e3aa0b54e 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 4.3E-18 T 06-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LFZ55_RS09695 9e99a0d13de430d6bfdb030e3aa0b54e 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 1.7E-65 T 06-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LFZ55_RS09695 9e99a0d13de430d6bfdb030e3aa0b54e 182 PIRSF PIRSF000847 1 178 2.9E-43 T 06-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LFZ55_RS12545 bfc27fba4b729e597eb7bf2f3c6fe418 462 Pfam PF00171 Aldehyde dehydrogenase family 10 457 9.6E-139 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12545 bfc27fba4b729e597eb7bf2f3c6fe418 462 Gene3D G3DSA:3.40.605.10 11 247 1.6E-70 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12545 bfc27fba4b729e597eb7bf2f3c6fe418 462 SUPERFAMILY SSF53720 11 460 1.57E-140 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12545 bfc27fba4b729e597eb7bf2f3c6fe418 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS12545 bfc27fba4b729e597eb7bf2f3c6fe418 462 Gene3D G3DSA:3.40.309.10 248 432 6.1E-61 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS18895 52ae71e776264632996f36329a8954cd 122 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 30 122 2.2E-11 T 06-07-2017 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 LFZ55_RS18895 52ae71e776264632996f36329a8954cd 122 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 87 122 1.5E-12 T 06-07-2017 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 LFZ55_RS06555 2ba2786f0b71fb6332f63e104a8393c1 102 Pfam PF05449 Putative 3TM holin, Phage_holin_3 12 94 5.5E-30 T 06-07-2017 IPR008473 Putative 3TM holin, Phage holin 3 LFZ55_RS06680 2ba2786f0b71fb6332f63e104a8393c1 102 Pfam PF05449 Putative 3TM holin, Phage_holin_3 12 94 5.5E-30 T 06-07-2017 IPR008473 Putative 3TM holin, Phage holin 3 LFZ55_RS09005 0221509669c716908a3efb14eb989006 163 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 7 159 2.6E-57 T 06-07-2017 IPR030992 Microcompartment protein PduM GO:0005198 LFZ55_RS09005 0221509669c716908a3efb14eb989006 163 Pfam PF15953 Putative propanediol utilisation 7 158 4.5E-46 T 06-07-2017 IPR030992 Microcompartment protein PduM GO:0005198 LFZ55_RS21195 9791d45285ca754dbe9d325e3138cf34 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 8.3E-246 T 06-07-2017 IPR033186 Helicase HerA-like C-terminal LFZ55_RS21195 9791d45285ca754dbe9d325e3138cf34 500 SUPERFAMILY SSF52540 18 369 3.04E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21195 9791d45285ca754dbe9d325e3138cf34 500 Gene3D G3DSA:3.40.50.300 204 380 5.1E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21195 9791d45285ca754dbe9d325e3138cf34 500 Gene3D G3DSA:3.40.50.300 14 108 5.1E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09090 9fdef326e8b1e8d36e23cb2c94a9493e 201 Gene3D G3DSA:3.40.1010.10 1 103 1.2E-27 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09090 9fdef326e8b1e8d36e23cb2c94a9493e 201 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 196 2.0E-65 T 06-07-2017 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 LFZ55_RS09090 9fdef326e8b1e8d36e23cb2c94a9493e 201 Gene3D G3DSA:3.30.950.10 104 199 1.1E-17 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09090 9fdef326e8b1e8d36e23cb2c94a9493e 201 SUPERFAMILY SSF53790 1 199 1.44E-40 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS09090 9fdef326e8b1e8d36e23cb2c94a9493e 201 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 178 2.3E-27 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 06-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.138 T 06-07-2017 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 2.3E-114 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 Gene3D G3DSA:1.10.3860.10 6 406 5.3E-119 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 06-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 SUPERFAMILY SSF118215 9 401 4.05E-121 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS01130 be1fe7f6494babc22e2b78c6a92611e3 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.7E-37 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS10440 f9b9e4705d017cb570b815997e37f9df 193 PIRSF PIRSF004982 5 189 3.2E-56 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LFZ55_RS10440 f9b9e4705d017cb570b815997e37f9df 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 168 3.6E-48 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LFZ55_RS10440 f9b9e4705d017cb570b815997e37f9df 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 189 5.4E-85 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LFZ55_RS18305 ff4d3bbd97b59c22d16a06e9aade54eb 196 Pfam PF01965 DJ-1/PfpI family 4 170 1.0E-47 T 06-07-2017 IPR002818 DJ-1/PfpI LFZ55_RS18305 ff4d3bbd97b59c22d16a06e9aade54eb 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 5.2E-63 T 06-07-2017 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 LFZ55_RS18305 ff4d3bbd97b59c22d16a06e9aade54eb 196 Gene3D G3DSA:3.40.50.880 2 188 7.3E-58 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS18305 ff4d3bbd97b59c22d16a06e9aade54eb 196 SUPERFAMILY SSF52317 5 188 3.91E-47 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS01530 0ad2b09077a59483c9cbc4f9d7a2786a 231 SUPERFAMILY SSF51182 1 231 2.75E-79 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS01530 0ad2b09077a59483c9cbc4f9d7a2786a 231 Gene3D G3DSA:2.60.120.10 4 230 7.6E-72 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS01530 0ad2b09077a59483c9cbc4f9d7a2786a 231 PIRSF PIRSF006232 1 230 6.8E-56 T 06-07-2017 IPR012093 Pirin LFZ55_RS01530 0ad2b09077a59483c9cbc4f9d7a2786a 231 Pfam PF02678 Pirin 9 119 2.2E-37 T 06-07-2017 IPR003829 Pirin, N-terminal domain LFZ55_RS03685 a89250953bfc2d5f5b05862503ec5aa7 162 Gene3D G3DSA:3.40.630.30 39 145 2.1E-15 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS03685 a89250953bfc2d5f5b05862503ec5aa7 162 SUPERFAMILY SSF55729 27 151 1.14E-12 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS03685 a89250953bfc2d5f5b05862503ec5aa7 162 Pfam PF13508 Acetyltransferase (GNAT) domain 86 144 6.6E-8 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.0E-28 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 06-07-2017 IPR018038 Ribosomal protein L30, conserved site LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.935 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 Gene3D G3DSA:3.30.1390.20 2 59 5.9E-30 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 SUPERFAMILY SSF55129 3 59 5.1E-21 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 9.9E-19 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LFZ55_RS02130 4feffea74a7b86a96c498c445aa4994e 59 PIRSF PIRSF002211 1 59 2.3E-29 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LFZ55_RS01730 5b7dfadf273c5bf7073894d1b9da2ef3 179 Pfam PF05137 Fimbrial assembly protein (PilN) 98 142 1.4E-6 T 06-07-2017 IPR007813 Fimbrial assembly PilN LFZ55_RS19030 449f0484cb63d94c4a14385d38b29610 246 SUPERFAMILY SSF141523 42 159 2.49E-10 T 06-07-2017 LFZ55_RS19030 449f0484cb63d94c4a14385d38b29610 246 Gene3D G3DSA:2.40.440.10 43 159 7.5E-4 T 06-07-2017 LFZ55_RS19030 449f0484cb63d94c4a14385d38b29610 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 160 2.0E-6 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 SMART SM00479 9 202 0.0016 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 PIRSF PIRSF000977 2 474 2.4E-200 T 06-07-2017 IPR023607 Exodeoxyribonuclease I GO:0004529 LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 Gene3D G3DSA:3.30.420.10 2 200 6.4E-88 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 SUPERFAMILY SSF53098 8 473 4.07E-135 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 Pfam PF08411 Exonuclease C-terminal 211 471 1.9E-103 T 06-07-2017 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 LFZ55_RS08915 e4107885d732f1a6fd4342c5b8d81eff 474 Pfam PF00929 Exonuclease 12 187 2.8E-31 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 TIGRFAM TIGR01391 dnaG: DNA primase 3 410 2.2E-97 T 06-07-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 242 1.8E-26 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 SUPERFAMILY SSF57783 1 99 5.44E-20 T 06-07-2017 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Pfam PF13155 Toprim-like 253 341 5.5E-15 T 06-07-2017 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 SUPERFAMILY SSF56731 114 415 9.68E-72 T 06-07-2017 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Gene3D G3DSA:3.40.1360.10 232 356 2.5E-35 T 06-07-2017 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Gene3D G3DSA:3.90.580.10 1 99 5.5E-21 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Pfam PF01807 CHC2 zinc finger 7 99 4.1E-20 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 Gene3D G3DSA:3.90.980.10 111 231 9.0E-24 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 SMART SM00400 34 89 3.6E-14 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LFZ55_RS24235 90862aef28bc109a3ff411084e8b6f70 420 SMART SM00493 250 321 3.1E-9 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 Pfam PF01226 Formate/nitrite transporter 15 276 1.2E-76 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 1.9E-97 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 Gene3D G3DSA:1.20.1080.10 29 280 1.5E-90 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS15760 b8f3ca768b77dadc8a803c794ab942ba 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 5.0E-128 T 06-07-2017 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 SUPERFAMILY SSF54211 3 124 1.29E-41 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-108 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 Gene3D G3DSA:3.30.230.20 3 124 1.7E-45 T 06-07-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 Gene3D G3DSA:3.30.1700.10 129 283 4.8E-63 T 06-07-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.015 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 SUPERFAMILY SSF54211 134 278 2.96E-54 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS19705 915934379ae763db2deacc41e7a823b2 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 1.8E-163 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 Gene3D G3DSA:1.10.2020.10 46 137 7.7E-42 T 06-07-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 SUPERFAMILY SSF51556 3 467 2.04E-182 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 Gene3D G3DSA:3.20.20.140 140 468 1.5E-161 T 06-07-2017 LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 Gene3D G3DSA:3.20.20.140 4 44 1.5E-161 T 06-07-2017 LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 Pfam PF02614 Glucuronate isomerase 1 467 6.1E-222 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS03550 c04cb90dee5917cc9e09528d57d3a445 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 469 50.341 T 06-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 LFZ55_RS07345 5563c0b4bfdf8bf2411acdc6bf050d62 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 7.2E-95 T 06-07-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 LFZ55_RS07345 5563c0b4bfdf8bf2411acdc6bf050d62 274 PIRSF PIRSF018455 1 274 2.1E-121 T 06-07-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 LFZ55_RS07345 5563c0b4bfdf8bf2411acdc6bf050d62 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 67.912 T 06-07-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 LFZ55_RS07345 5563c0b4bfdf8bf2411acdc6bf050d62 274 Gene3D G3DSA:3.30.1380.10 21 272 4.2E-107 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS07345 5563c0b4bfdf8bf2411acdc6bf050d62 274 SUPERFAMILY SSF55166 21 272 4.0E-102 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS12320 a57382d7807632ae5a6c13b8d2d984e6 174 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 164 6.8E-37 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN LFZ55_RS12320 a57382d7807632ae5a6c13b8d2d984e6 174 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 150 4.5E-22 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN LFZ55_RS20815 0992f85838565515a020b08fa188552f 213 Pfam PF11860 Protein of unknown function (DUF3380) 35 205 2.5E-66 T 06-07-2017 IPR024408 Domain of unknown function DUF3380 LFZ55_RS11000 d3c3c23024ca71c800098f26b11346bf 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 54.457 T 06-07-2017 IPR028616 Regulator of RpoS LFZ55_RS11000 d3c3c23024ca71c800098f26b11346bf 337 Gene3D G3DSA:3.40.50.2300 8 124 9.1E-30 T 06-07-2017 LFZ55_RS11000 d3c3c23024ca71c800098f26b11346bf 337 SMART SM00448 8 120 1.7E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS11000 d3c3c23024ca71c800098f26b11346bf 337 Pfam PF00072 Response regulator receiver domain 10 119 2.2E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS11000 d3c3c23024ca71c800098f26b11346bf 337 SUPERFAMILY SSF52172 8 160 4.13E-31 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 27.942 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 Pfam PF02107 Flagellar L-ring protein 47 231 3.3E-60 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 4.3E-36 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 4.3E-36 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 4.3E-36 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 4.3E-36 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS14365 0e2d3fd1daf333b04d85ef1d6a3f82e4 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 4.3E-36 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LFZ55_RS08040 dfa65a45d1d126c9dcb82cced0856884 1135 SUPERFAMILY SSF49899 157 351 1.2E-10 T 06-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain LFZ55_RS08040 dfa65a45d1d126c9dcb82cced0856884 1135 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 194 349 4.2E-7 T 06-07-2017 LFZ55_RS08040 dfa65a45d1d126c9dcb82cced0856884 1135 Gene3D G3DSA:2.60.120.200 194 358 2.8E-10 T 06-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain LFZ55_RS08040 dfa65a45d1d126c9dcb82cced0856884 1135 Gene3D G3DSA:2.60.120.200 632 826 2.1E-10 T 06-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain LFZ55_RS08040 dfa65a45d1d126c9dcb82cced0856884 1135 SUPERFAMILY SSF49899 624 824 3.76E-9 T 06-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.4E-22 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.572 T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 Gene3D G3DSA:3.40.50.700 47 174 5.6E-32 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 SUPERFAMILY SSF56770 35 185 2.62E-65 T 06-07-2017 LFZ55_RS07635 5f82f0b2756e17051d39f5d6d0498363 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 1.2E-70 T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS18290 f7d40da71c69319f598963446a46135e 454 SUPERFAMILY SSF103473 12 391 2.75E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS18290 f7d40da71c69319f598963446a46135e 454 Gene3D G3DSA:1.20.1250.20 212 393 9.0E-22 T 06-07-2017 LFZ55_RS18290 f7d40da71c69319f598963446a46135e 454 Gene3D G3DSA:1.20.1250.20 13 192 1.3E-33 T 06-07-2017 LFZ55_RS18290 f7d40da71c69319f598963446a46135e 454 Pfam PF07690 Major Facilitator Superfamily 20 266 3.4E-32 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS18930 51cf05dfae160fd6aeaa4ad7421dec85 418 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 201 410 3.5E-17 T 06-07-2017 IPR032034 Yop protein translocation protein D, periplasmic domain LFZ55_RS18930 51cf05dfae160fd6aeaa4ad7421dec85 418 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 416 1.7E-59 T 06-07-2017 IPR012843 Type III secretion system YscD/HrpQ LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 06-07-2017 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 479 512 830.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 715 748 0.04 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 401 458 310.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 220 251 3.2E-6 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 282 314 69.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SMART SM00564 339 380 0.0045 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 06-07-2017 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SUPERFAMILY SSF50998 557 792 3.27E-157 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 SUPERFAMILY SSF50998 160 521 3.27E-157 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Gene3D G3DSA:2.140.10.10 158 533 2.8E-163 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Gene3D G3DSA:2.140.10.10 568 794 2.8E-163 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 225 258 7.5E-8 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 289 320 2.1E-5 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 721 758 5.1E-6 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 664 696 4.4E-7 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 442 468 9.2E-7 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS19510 c3950f2573ace3f776a20a2b7be5eb4b 796 Pfam PF01011 PQQ enzyme repeat 357 387 1.5E-5 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 SUPERFAMILY SSF103473 19 439 3.66E-65 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 Pfam PF07690 Major Facilitator Superfamily 283 437 1.7E-12 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 Gene3D G3DSA:1.20.1250.20 13 224 8.4E-23 T 06-07-2017 LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 Gene3D G3DSA:1.20.1250.20 249 438 1.1E-16 T 06-07-2017 LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 1.8E-150 T 06-07-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LFZ55_RS01155 17161b773ed6ac8f667b060164b5d912 440 Pfam PF00083 Sugar (and other) transporter 24 226 1.0E-23 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.657 T 06-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 SUPERFAMILY SSF53067 1 309 2.45E-44 T 06-07-2017 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 Pfam PF00814 Glycoprotease family 24 307 9.4E-103 T 06-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 5.6E-130 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.4E-136 T 06-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 Gene3D G3DSA:3.30.420.40 1 159 4.0E-51 T 06-07-2017 LFZ55_RS03195 a5ac15822a89e46a00b3ff9d7149883b 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 06-07-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 LFZ55_RS10290 27ac8ae87cdd709efa48fd6400af61a8 228 SMART SM00945 5 119 2.7E-60 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS10290 27ac8ae87cdd709efa48fd6400af61a8 228 Pfam PF04352 ProQ/FINO family 8 115 5.6E-42 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS10290 27ac8ae87cdd709efa48fd6400af61a8 228 SUPERFAMILY SSF48657 5 119 5.36E-40 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS10290 27ac8ae87cdd709efa48fd6400af61a8 228 Gene3D G3DSA:1.10.1710.10 4 118 3.4E-36 T 06-07-2017 IPR016103 ProQ/FinO domain LFZ55_RS10290 27ac8ae87cdd709efa48fd6400af61a8 228 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 227 30.589 T 06-07-2017 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 Pfam PF00263 Bacterial type II and III secretion system protein 359 517 4.0E-34 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 406 421 1.6E-40 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 498 517 1.6E-40 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 306 326 1.6E-40 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 192 209 1.6E-40 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 372 391 1.6E-40 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 258 520 1.7E-104 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 465 498 - T 06-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 LFZ55_RS04920 6ae726920e03ae63ad7a3bb8133a2b4b 563 Pfam PF03958 Bacterial type II/III secretion system short domain 182 303 9.1E-14 T 06-07-2017 IPR005644 NolW-like LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 Gene3D G3DSA:3.40.50.300 20 260 1.2E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 20 266 5.5E-121 T 06-07-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 Pfam PF00005 ABC transporter 35 190 4.9E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 SMART SM00382 44 246 8.6E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS24125 c928e754657eac3e693fe2031f057e26 266 SUPERFAMILY SSF52540 20 252 4.48E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 SUPERFAMILY SSF50104 2 114 8.32E-48 T 06-07-2017 IPR008991 Translation protein SH3-like domain LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 PIRSF PIRSF002191 1 115 2.3E-50 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 4.5E-53 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.609 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 Pfam PF01245 Ribosomal protein L19 3 113 1.1E-49 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS05800 5dd88621f0b9972c30407e10691782de 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 06-07-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS02440 d529b6bb0ca5d7f67889b6cedbd44140 90 Gene3D G3DSA:3.30.370.10 1 86 1.1E-13 T 06-07-2017 IPR000468 Barstar (barnase inhibitor) LFZ55_RS02440 d529b6bb0ca5d7f67889b6cedbd44140 90 SUPERFAMILY SSF52038 1 89 1.31E-27 T 06-07-2017 IPR000468 Barstar (barnase inhibitor) LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 Pfam PF03379 CcmB protein 2 216 3.0E-84 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PIRSF PIRSF002764 1 219 1.3E-76 T 06-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS00125 b53b3dc404b96dd7a69aa18baff3fa01 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 215 2.9E-87 T 06-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 Pfam PF03379 CcmB protein 2 216 3.0E-84 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PIRSF PIRSF002764 1 219 1.3E-76 T 06-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 5.0E-69 T 06-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07960 b53b3dc404b96dd7a69aa18baff3fa01 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 215 2.9E-87 T 06-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LFZ55_RS22770 aa44a1ce7aa650e873ba0481ac797a9e 252 SUPERFAMILY SSF69572 2 245 3.92E-81 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS22770 aa44a1ce7aa650e873ba0481ac797a9e 252 Gene3D G3DSA:3.40.50.720 3 244 8.2E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS22770 aa44a1ce7aa650e873ba0481ac797a9e 252 Pfam PF00899 ThiF family 9 240 2.0E-63 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 Pfam PF02300 Fumarate reductase subunit C 3 128 2.8E-56 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.893 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 114 5.0E-48 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 PIRSF PIRSF000180 2 130 5.0E-61 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 Gene3D G3DSA:1.20.1300.10 3 130 1.3E-59 T 06-07-2017 LFZ55_RS21820 ed4e83ae1f7101581ed709f1b980e674 131 SUPERFAMILY SSF81343 2 131 3.79E-58 T 06-07-2017 LFZ55_RS07845 fd27f51db561362d09e4def29bb80410 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 6.7E-11 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS07845 fd27f51db561362d09e4def29bb80410 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LFZ55_RS07845 fd27f51db561362d09e4def29bb80410 84 SUPERFAMILY SSF54292 3 83 1.7E-21 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS07845 fd27f51db561362d09e4def29bb80410 84 Gene3D G3DSA:3.10.20.30 3 83 1.8E-19 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 SUPERFAMILY SSF54211 1 162 4.4E-50 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 Pfam PF08544 GHMP kinases C terminal 218 263 1.3E-4 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 7.3E-11 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.183 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 PIRSF PIRSF010376 1 283 2.7E-85 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 Gene3D G3DSA:3.30.70.890 166 281 1.1E-44 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 Gene3D G3DSA:3.30.230.10 4 163 1.6E-54 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 2.3E-117 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 LFZ55_RS10860 f9ea64e3f752b60153626a9379590d78 283 SUPERFAMILY SSF55060 164 280 2.35E-35 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 173 2.6E-46 T 06-07-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 SUPERFAMILY SSF143744 198 329 1.26E-35 T 06-07-2017 LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 SUPERFAMILY SSF89028 1 171 7.46E-50 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 Pfam PF01923 Cobalamin adenosyltransferase 3 166 2.2E-50 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 PIRSF PIRSF036411 1 331 4.8E-91 T 06-07-2017 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 Gene3D G3DSA:1.20.1200.10 12 174 1.1E-50 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 Pfam PF03928 Haem-degrading 202 326 3.6E-26 T 06-07-2017 IPR005624 Haem-degrading LFZ55_RS08995 6c26d30be6a53d0ba854381c0c70e6b8 335 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 156 2.0E-50 T 06-07-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 Gene3D G3DSA:3.40.50.300 192 459 2.5E-94 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 SUPERFAMILY SSF52540 79 454 3.61E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 SUPERFAMILY SSF160246 8 64 9.42E-5 T 06-07-2017 LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 Pfam PF00437 Type II/IV secretion system protein 90 353 1.9E-78 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 9 64 1.4E-5 T 06-07-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 LFZ55_RS19645 20fde30c99cd8f11420c4b4c5ce8b293 461 Gene3D G3DSA:3.30.450.90 53 186 1.8E-44 T 06-07-2017 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 6 143 9.0E-45 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 06-07-2017 IPR018488 Cyclic nucleotide-binding, conserved site LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 06-07-2017 IPR018488 Cyclic nucleotide-binding, conserved site LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 06-07-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LFZ55_RS01855 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain LFZ55_RS13775 8b6a2e8283768c72bb6e96c82dda514f 248 Pfam PF06629 MltA-interacting protein MipA 28 248 2.0E-53 T 06-07-2017 IPR010583 MltA-interacting MipA LFZ55_RS09595 3ee66204766ce5067aac3c93ef2e04c6 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS09595 3ee66204766ce5067aac3c93ef2e04c6 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS09595 3ee66204766ce5067aac3c93ef2e04c6 77 Gene3D G3DSA:3.30.110.40 6 77 2.2E-33 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS09595 3ee66204766ce5067aac3c93ef2e04c6 77 SUPERFAMILY SSF64307 2 77 2.75E-24 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 50.263 T 06-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 1.1E-178 T 06-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 PIRSF PIRSF000484 1 398 3.5E-63 T 06-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 1.7E-83 T 06-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 SUPERFAMILY SSF51690 120 392 1.16E-86 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 Gene3D G3DSA:3.20.140.10 3 376 6.6E-144 T 06-07-2017 LFZ55_RS15620 0ddb304ad3d54683e898b1e81bfae0d0 400 SUPERFAMILY SSF54675 2 137 2.06E-43 T 06-07-2017 LFZ55_RS04280 a54d59690a7d76373a4fc4a387751923 176 SUPERFAMILY SSF49329 26 175 1.7E-46 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS04280 a54d59690a7d76373a4fc4a387751923 176 Gene3D G3DSA:2.60.40.200 26 175 5.5E-44 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS04280 a54d59690a7d76373a4fc4a387751923 176 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 175 9.6E-28 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS04280 a54d59690a7d76373a4fc4a387751923 176 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 164 175 - T 06-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 148 163 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 7 215 9.8E-90 T 06-07-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 Pfam PF00813 FliP family 10 215 2.7E-63 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 27 47 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 190 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 8 27 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 148 168 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 218 4.4E-70 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04960 54737161acd224b8eeb84284c4ff69a0 224 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 196 208 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS04510 463e6bdcc42af9ff136804aa5b1bd098 295 SUPERFAMILY SSF103481 31 132 4.32E-10 T 06-07-2017 LFZ55_RS04510 463e6bdcc42af9ff136804aa5b1bd098 295 TIGRFAM TIGR00688 rarD: protein RarD 4 246 6.8E-46 T 06-07-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LFZ55_RS04510 463e6bdcc42af9ff136804aa5b1bd098 295 SUPERFAMILY SSF103481 183 270 5.49E-7 T 06-07-2017 LFZ55_RS04510 463e6bdcc42af9ff136804aa5b1bd098 295 Pfam PF00892 EamA-like transporter family 2 132 9.3E-11 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 Gene3D G3DSA:1.10.10.10 157 235 6.3E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 2.4E-23 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 Pfam PF00072 Response regulator receiver domain 13 121 3.2E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 SUPERFAMILY SSF46894 142 234 1.39E-25 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 SMART SM00862 156 232 1.4E-25 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 SUPERFAMILY SSF52172 6 138 2.28E-39 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 SMART SM00448 11 121 3.4E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS08595 d0f318181177c6756f26b575aa812c99 240 Gene3D G3DSA:3.40.50.2300 9 156 1.5E-38 T 06-07-2017 LFZ55_RS25015 625f6d22d6a0bb36885af1c9892bf224 208 SUPERFAMILY SSF52540 1 206 4.39E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS25015 625f6d22d6a0bb36885af1c9892bf224 208 PIRSF PIRSF009320 1 208 2.0E-77 T 06-07-2017 LFZ55_RS25015 625f6d22d6a0bb36885af1c9892bf224 208 Gene3D G3DSA:3.40.50.300 1 207 9.6E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS25015 625f6d22d6a0bb36885af1c9892bf224 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 138 1.0E-19 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS15735 cbfc3a5f00d17a0f3f30fedac359fa72 227 SUPERFAMILY SSF52540 6 224 3.73E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15735 cbfc3a5f00d17a0f3f30fedac359fa72 227 Gene3D G3DSA:3.40.50.300 6 221 1.5E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15735 cbfc3a5f00d17a0f3f30fedac359fa72 227 Pfam PF02224 Cytidylate kinase 8 221 2.1E-85 T 06-07-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LFZ55_RS15735 cbfc3a5f00d17a0f3f30fedac359fa72 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.639 T 06-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LFZ55_RS15735 cbfc3a5f00d17a0f3f30fedac359fa72 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.4E-97 T 06-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 Gene3D G3DSA:2.40.50.140 1 103 2.4E-42 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 SUPERFAMILY SSF50249 1 103 8.23E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 30.703 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 6.4E-36 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 Pfam PF00436 Single-strand binding protein family 3 87 5.0E-12 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 LFZ55_RS21580 8b1b3fd214255b976dd273654390617d 104 PIRSF PIRSF003135 1 101 3.7E-50 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 SUPERFAMILY SSF100950 226 490 3.1E-71 T 06-07-2017 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 461 1.8E-40 T 06-07-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 5 490 3.4E-226 T 06-07-2017 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 8 213 6.1E-66 T 06-07-2017 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 Gene3D G3DSA:3.40.810.20 225 485 6.0E-73 T 06-07-2017 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 Gene3D G3DSA:3.40.1080.10 8 218 3.3E-41 T 06-07-2017 LFZ55_RS04010 f282d2e3674f7ca96713d425a8cac34a 492 SUPERFAMILY SSF100950 8 219 4.19E-59 T 06-07-2017 LFZ55_RS22525 8d8ae67c31d71f35ece062392dfeaebd 165 Gene3D G3DSA:3.40.1410.10 3 165 1.4E-57 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS22525 8d8ae67c31d71f35ece062392dfeaebd 165 Pfam PF04345 Chorismate lyase 16 165 2.4E-31 T 06-07-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 LFZ55_RS22525 8d8ae67c31d71f35ece062392dfeaebd 165 SUPERFAMILY SSF64288 6 165 5.0E-45 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LFZ55_RS22525 8d8ae67c31d71f35ece062392dfeaebd 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.852 T 06-07-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 LFZ55_RS09895 3bc448cfe93e1ffc3d12b88f9626c427 189 Gene3D G3DSA:3.10.180.10 1 187 1.7E-78 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS09895 3bc448cfe93e1ffc3d12b88f9626c427 189 Pfam PF06185 YecM protein 10 185 2.6E-70 T 06-07-2017 IPR010393 Protein of unknown function DUF991 LFZ55_RS09895 3bc448cfe93e1ffc3d12b88f9626c427 189 SUPERFAMILY SSF54593 2 186 1.86E-67 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS18360 9c702fcb8eda9d75bb1be827a8d6d673 156 Gene3D G3DSA:3.40.50.960 2 152 3.2E-63 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS18360 9c702fcb8eda9d75bb1be827a8d6d673 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.7E-54 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS18360 9c702fcb8eda9d75bb1be827a8d6d673 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.684 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS18360 9c702fcb8eda9d75bb1be827a8d6d673 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.7E-59 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS18360 9c702fcb8eda9d75bb1be827a8d6d673 156 SUPERFAMILY SSF52121 5 154 5.89E-59 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS18345 39480fc51d5ac4116d7ac72bcc5ea858 171 Pfam PF04608 Phosphatidylglycerophosphatase A 22 161 1.2E-51 T 06-07-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LFZ55_RS18345 39480fc51d5ac4116d7ac72bcc5ea858 171 SUPERFAMILY SSF101307 15 160 9.94E-48 T 06-07-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LFZ55_RS18345 39480fc51d5ac4116d7ac72bcc5ea858 171 PIRSF PIRSF006162 11 169 7.6E-58 T 06-07-2017 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LFZ55_RS18345 39480fc51d5ac4116d7ac72bcc5ea858 171 Gene3D G3DSA:1.10.3760.10 77 156 1.4E-4 T 06-07-2017 IPR027416 YutG-like domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SUPERFAMILY SSF47384 655 731 1.69E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SUPERFAMILY SSF52402 253 363 3.27E-7 T 06-07-2017 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Gene3D G3DSA:1.10.287.130 658 726 2.8E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 838 7.4E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 861 7.4E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 880 7.4E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 810 824 7.4E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SMART SM00388 663 730 4.2E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Gene3D G3DSA:3.30.565.10 732 884 8.1E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 8.7E-99 T 06-07-2017 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 1.0E-28 T 06-07-2017 IPR025201 Sensor protein KdpD, transmembrane domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Gene3D G3DSA:3.40.50.620 245 352 2.0E-8 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SUPERFAMILY SSF52540 27 145 8.34E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Gene3D G3DSA:1.20.120.620 397 502 9.6E-40 T 06-07-2017 LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SUPERFAMILY SSF55874 719 881 1.7E-40 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 SMART SM00387 773 883 2.7E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 776 881 5.3E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Gene3D G3DSA:3.40.50.300 21 229 3.5E-102 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17085 37ca5e6d69482670434a484b0c2e4435 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 1.8E-10 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 SUPERFAMILY SSF69635 1 132 3.3E-48 T 06-07-2017 LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 Pfam PF03519 Invasion protein B family 18 95 5.1E-29 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 PRINTS PR01305 Invasion protein B family signature 111 123 4.2E-25 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 PRINTS PR01305 Invasion protein B family signature 98 111 4.2E-25 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 PRINTS PR01305 Invasion protein B family signature 31 41 4.2E-25 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 PRINTS PR01305 Invasion protein B family signature 41 55 4.2E-25 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 PRINTS PR01305 Invasion protein B family signature 18 31 4.2E-25 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK LFZ55_RS04935 ad722ecad2ae5f5f121a885eb7643bec 135 Gene3D G3DSA:3.30.1460.10 1 132 2.0E-50 T 06-07-2017 LFZ55_RS12615 eae7a1f81b030bf76b48b31e630854b8 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.2E-10 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS12615 eae7a1f81b030bf76b48b31e630854b8 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 4.3E-10 T 06-07-2017 IPR019626 Stress-induced protein, KGG, repeat LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 Pfam PF00664 ABC transporter transmembrane region 172 434 6.7E-27 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 SUPERFAMILY SSF90123 155 466 4.71E-51 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 SMART SM00382 510 703 2.7E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 Pfam PF00005 ABC transporter 504 650 3.6E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 Gene3D G3DSA:3.90.70.10 19 128 1.9E-17 T 06-07-2017 LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 Gene3D G3DSA:3.40.50.300 485 711 3.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 SUPERFAMILY SSF52540 473 703 2.0E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 19 711 1.8E-230 T 06-07-2017 IPR017750 ATPase, type I secretion system LFZ55_RS05710 2dc9469767442d75fa9a77d7fa751087 726 Gene3D G3DSA:1.20.1560.10 156 464 1.9E-49 T 06-07-2017 LFZ55_RS23060 8b995731d950271c8d1b03845abf7d1e 330 Pfam PF05036 Sporulation related domain 257 324 3.2E-16 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS23060 8b995731d950271c8d1b03845abf7d1e 330 Gene3D G3DSA:3.30.70.1070 252 328 4.8E-32 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS23060 8b995731d950271c8d1b03845abf7d1e 330 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 326 1.4E-97 T 06-07-2017 IPR011930 Cell division protein FtsN GO:0005515 LFZ55_RS23060 8b995731d950271c8d1b03845abf7d1e 330 Hamap MF_02039 Cell division protein FtsN [ftsN]. 39 330 34.871 T 06-07-2017 IPR011930 Cell division protein FtsN GO:0005515 LFZ55_RS23060 8b995731d950271c8d1b03845abf7d1e 330 SUPERFAMILY SSF110997 255 326 1.57E-19 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS14835 a93fddcaaaefacc955ef6e68059bb8d4 426 SUPERFAMILY SSF103473 12 410 1.2E-68 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS14835 a93fddcaaaefacc955ef6e68059bb8d4 426 Pfam PF07690 Major Facilitator Superfamily 24 270 3.3E-30 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS14835 a93fddcaaaefacc955ef6e68059bb8d4 426 Gene3D G3DSA:1.20.1250.20 19 202 3.8E-36 T 06-07-2017 LFZ55_RS14835 a93fddcaaaefacc955ef6e68059bb8d4 426 Gene3D G3DSA:1.20.1250.20 233 418 5.9E-17 T 06-07-2017 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 404 4.0E-16 T 06-07-2017 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 Pfam PF04055 Radical SAM superfamily 18 188 2.8E-13 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 Gene3D G3DSA:3.20.20.70 17 355 4.1E-42 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 12 389 2.5E-160 T 06-07-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 SUPERFAMILY SSF102114 17 351 4.19E-39 T 06-07-2017 LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 281 370 3.8E-19 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS10665 6075ec0a7d9a05d39577800f34f6ecf3 410 Pfam PF13186 Iron-sulfur cluster-binding domain 282 342 1.4E-8 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 162 174 1.0E-15 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 75 88 1.0E-15 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 115 128 1.0E-15 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.0E-15 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 95 110 1.0E-15 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 Pfam PF01514 Secretory protein of YscJ/FliF family 6 187 9.5E-25 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF LFZ55_RS13180 339190b8ad20aec3383c3e8d5e822b13 249 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 4 190 3.0E-72 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LFZ55_RS02410 77d1e414da6648d7064ab9875d426b8b 1266 Pfam PF13502 AsmA-like C-terminal region 1010 1252 3.5E-67 T 06-07-2017 IPR032712 AsmA-like, C-terminal LFZ55_RS02410 77d1e414da6648d7064ab9875d426b8b 1266 Pfam PF13116 Protein of unknown function 504 788 3.8E-97 T 06-07-2017 IPR025263 Domain of unknown function DUF3971 LFZ55_RS02410 77d1e414da6648d7064ab9875d426b8b 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 06-07-2017 IPR011836 Conserved hypothetical protein CHP02099 LFZ55_RS06120 dd8599fe8902e9f190153f8f2c6d8179 425 SUPERFAMILY SSF63520 238 333 1.03E-14 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS06120 dd8599fe8902e9f190153f8f2c6d8179 425 Gene3D G3DSA:1.10.1790.10 238 332 1.2E-14 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS06120 dd8599fe8902e9f190153f8f2c6d8179 425 Pfam PF00874 PRD domain 241 328 1.6E-11 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS06120 dd8599fe8902e9f190153f8f2c6d8179 425 Pfam PF00874 PRD domain 132 216 1.4E-8 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS14410 aaf4f9673d39732d622d7be42e312051 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 87 8.9E-11 T 06-07-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal LFZ55_RS14410 aaf4f9673d39732d622d7be42e312051 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 6.2E-19 T 06-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LFZ55_RS14410 aaf4f9673d39732d622d7be42e312051 97 SUPERFAMILY SSF101498 1 88 3.92E-14 T 06-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LFZ55_RS00090 4f2f85f1186d2a8cc330ebe8290bff4b 346 Gene3D G3DSA:3.40.50.2300 49 165 8.5E-14 T 06-07-2017 LFZ55_RS00090 4f2f85f1186d2a8cc330ebe8290bff4b 346 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 50 337 1.9E-114 T 06-07-2017 IPR014301 TMAO reductase system periplasmic, TorT LFZ55_RS00090 4f2f85f1186d2a8cc330ebe8290bff4b 346 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 49 335 1.1E-64 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain LFZ55_RS00090 4f2f85f1186d2a8cc330ebe8290bff4b 346 Gene3D G3DSA:3.40.50.2300 166 310 4.7E-29 T 06-07-2017 LFZ55_RS00090 4f2f85f1186d2a8cc330ebe8290bff4b 346 SUPERFAMILY SSF53822 48 309 1.09E-38 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS03465 01789ff95b99032aa6dddf8fc600083d 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 91.828 T 06-07-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 LFZ55_RS03465 01789ff95b99032aa6dddf8fc600083d 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 1.4E-78 T 06-07-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria LFZ55_RS03465 01789ff95b99032aa6dddf8fc600083d 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 2.4E-34 T 06-07-2017 IPR005134 Uncharacterised protein family UPF0114 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 SMART SM01003 4 137 3.3E-74 T 06-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 06-07-2017 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 SMART SM01002 146 311 1.1E-83 T 06-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Gene3D G3DSA:3.50.50.60 169 201 5.5E-6 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 9.4E-76 T 06-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 3.9E-36 T 06-07-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 SUPERFAMILY SSF52283 1 168 2.98E-56 T 06-07-2017 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 SUPERFAMILY SSF51735 137 317 7.52E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 1.3E-303 T 06-07-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 PIRSF PIRSF000203 1 508 6.3E-284 T 06-07-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 06-07-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.2E-51 T 06-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Gene3D G3DSA:3.40.50.1770 1 168 5.5E-69 T 06-07-2017 LFZ55_RS12815 9bf4537901709c99a15239cd48eea844 509 Gene3D G3DSA:3.40.50.1770 202 371 1.2E-46 T 06-07-2017 LFZ55_RS23330 fc017eef272bf114c47fede8cd79383b 145 SUPERFAMILY SSF69500 1 144 7.85E-57 T 06-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain LFZ55_RS23330 fc017eef272bf114c47fede8cd79383b 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.868 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LFZ55_RS23330 fc017eef272bf114c47fede8cd79383b 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 5.9E-72 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LFZ55_RS23330 fc017eef272bf114c47fede8cd79383b 145 Gene3D G3DSA:3.50.80.10 1 144 6.7E-57 T 06-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain LFZ55_RS23330 fc017eef272bf114c47fede8cd79383b 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.0E-52 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LFZ55_RS14965 620447de26fde5ceb97b6f698c0516d4 308 SUPERFAMILY SSF56281 32 306 1.83E-50 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS14965 620447de26fde5ceb97b6f698c0516d4 308 Gene3D G3DSA:3.60.15.10 32 307 1.1E-55 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS14965 620447de26fde5ceb97b6f698c0516d4 308 Pfam PF12706 Beta-lactamase superfamily domain 64 277 8.7E-20 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS14965 620447de26fde5ceb97b6f698c0516d4 308 SMART SM00849 51 254 7.6E-5 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.1E-8 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.1E-8 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 Pfam PF00293 NUDIX domain 5 125 1.3E-20 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 PRINTS PR01401 Mutator MutT protein signature 2 23 1.1E-14 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 PRINTS PR01401 Mutator MutT protein signature 77 90 1.1E-14 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 128 1.4E-62 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 Gene3D G3DSA:3.90.79.10 3 127 2.1E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS19685 e13eaabcec6de3c6de2b24c7732e561b 131 SUPERFAMILY SSF55811 1 128 5.42E-36 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS09405 5552f5fbd7414df9d02bfa2636b63f5a 95 SUPERFAMILY SSF51430 10 90 3.14E-18 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS09405 5552f5fbd7414df9d02bfa2636b63f5a 95 Gene3D G3DSA:3.20.20.100 12 87 1.9E-19 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS09405 5552f5fbd7414df9d02bfa2636b63f5a 95 Pfam PF00248 Aldo/keto reductase family 13 73 3.2E-12 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 2.0E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 523 537 2.0E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 2.0E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 2.0E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 2.0E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 TIGRFAM TIGR01056 topB: DNA topoisomerase III 5 655 8.6E-183 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:3.40.50.140 5 152 2.6E-34 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 SUPERFAMILY SSF57783 620 651 3.57E-9 T 06-07-2017 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Pfam PF01751 Toprim domain 5 136 4.8E-13 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:3.30.65.10 620 650 1.6E-8 T 06-07-2017 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Pfam PF01131 DNA topoisomerase 160 594 8.2E-107 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 SUPERFAMILY SSF56712 5 606 4.84E-156 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 SMART SM00436 130 225 7.9E-18 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 SMART SM00437 278 560 9.0E-76 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:2.70.20.10 368 483 1.4E-29 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:2.70.20.10 221 253 1.4E-29 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:1.10.460.10 160 219 3.3E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Gene3D G3DSA:1.10.460.10 484 606 3.3E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 620 655 8.7E-11 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LFZ55_RS24220 811e195647d1c2de67dee36031ba8d51 668 SMART SM00493 4 130 1.2E-17 T 06-07-2017 IPR006171 Toprim domain LFZ55_RS02335 11dce09b3c513bc44cbc25fdb5c06ea9 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02335 11dce09b3c513bc44cbc25fdb5c06ea9 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 1.2E-227 T 06-07-2017 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 LFZ55_RS02335 11dce09b3c513bc44cbc25fdb5c06ea9 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02335 11dce09b3c513bc44cbc25fdb5c06ea9 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 1.8E-111 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS02335 11dce09b3c513bc44cbc25fdb5c06ea9 483 Pfam PF00474 Sodium:solute symporter family 36 432 1.9E-137 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.0E-35 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 Pfam PF01197 Ribosomal protein L31 1 64 8.4E-31 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.503 T 06-07-2017 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.9E-23 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.9E-23 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-23 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 SUPERFAMILY SSF143800 1 66 2.71E-28 T 06-07-2017 LFZ55_RS23045 a8ad45ba2a32098610dd1497c4537183 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.749 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 2.2E-113 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 Gene3D G3DSA:3.40.50.300 45 108 6.5E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 Gene3D G3DSA:3.40.50.300 155 167 6.5E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 1.9E-116 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 LFZ55_RS15710 0094f4db6ff0e44c9f3af2c6050766b9 325 SUPERFAMILY SSF52540 46 163 1.78E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08195 699bfb28e76799a122fab09f5432899e 209 Hamap MF_01150 Chaperone protein TorD [torD]. 2 196 27.278 T 06-07-2017 IPR023069 Chaperone TorD LFZ55_RS08195 699bfb28e76799a122fab09f5432899e 209 SUPERFAMILY SSF89155 8 197 9.29E-31 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS08195 699bfb28e76799a122fab09f5432899e 209 Pfam PF02613 Nitrate reductase delta subunit 50 166 2.3E-18 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS08195 699bfb28e76799a122fab09f5432899e 209 Gene3D G3DSA:1.10.3480.10 7 31 1.1E-25 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS08195 699bfb28e76799a122fab09f5432899e 209 Gene3D G3DSA:1.10.3480.10 70 203 1.1E-25 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.6E-5 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.98 T 06-07-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 Gene3D G3DSA:3.40.50.300 456 632 4.9E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 SUPERFAMILY SSF52540 212 440 3.15E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 SUPERFAMILY SSF52540 503 601 3.15E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 9.1E-16 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 1.1E-215 T 06-07-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 Gene3D G3DSA:3.40.50.300 199 380 1.2E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 SMART SM00490 492 589 6.0E-9 T 06-07-2017 IPR001650 Helicase, C-terminal LFZ55_RS23050 ee4b66cb61ca6d350e54b6d17c34dd19 732 SMART SM00487 195 391 1.3E-19 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 SUPERFAMILY SSF55326 3 157 7.15E-33 T 06-07-2017 LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 SUPERFAMILY SSF56042 163 331 1.5E-38 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 Gene3D G3DSA:3.90.650.10 164 316 4.8E-23 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 3.0E-15 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 PIRSF PIRSF005644 1 336 1.8E-120 T 06-07-2017 IPR011854 Hydrogenase expression/formation protein HypE LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 9.1E-25 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 336 6.4E-139 T 06-07-2017 IPR011854 Hydrogenase expression/formation protein HypE LFZ55_RS05120 a2944af979e5935a75f95260992707ae 336 Gene3D G3DSA:3.30.1330.10 15 156 1.3E-24 T 06-07-2017 IPR016188 PurM-like, N-terminal domain LFZ55_RS20995 04b9bc053c7dfc0e3436e16f51f651a0 208 Pfam PF11444 Protein of unknown function (DUF2895) 7 203 1.8E-85 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 LFZ55_RS20995 04b9bc053c7dfc0e3436e16f51f651a0 208 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 4.8E-89 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 SUPERFAMILY SSF53383 75 461 2.13E-46 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 459 3.5E-191 T 06-07-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 1.7E-9 T 06-07-2017 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 Gene3D G3DSA:3.40.640.10 74 321 3.2E-31 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 255.159 T 06-07-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS00805 8d7511e9999b2de20196ae4ddae57c2f 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 1.2E-178 T 06-07-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 Gene3D G3DSA:3.30.300.20 194 294 2.1E-40 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 171 1.3E-42 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.3E-23 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.283 T 06-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 6.2E-119 T 06-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 Gene3D G3DSA:3.40.50.300 10 193 2.6E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 SUPERFAMILY SSF52540 11 205 3.17E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 SUPERFAMILY SSF54814 182 297 1.37E-40 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LFZ55_RS06000 55d84c1440f1d6050793d4de5f06f31d 301 Pfam PF07650 KH domain 209 285 1.5E-19 T 06-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS05445 b7db7d81108095eb43c60547a7ec1962 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 5.6E-18 T 06-07-2017 IPR000612 Proteolipid membrane potential modulator GO:0016021 LFZ55_RS05445 b7db7d81108095eb43c60547a7ec1962 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 06-07-2017 IPR000612 Proteolipid membrane potential modulator GO:0016021 LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.9E-38 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 SMART SM00852 14 158 3.1E-29 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 Gene3D G3DSA:3.40.980.10 8 169 6.5E-51 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 SUPERFAMILY SSF53218 8 168 3.93E-46 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 PIRSF PIRSF006443 1 166 7.8E-62 T 06-07-2017 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 9.4E-33 T 06-07-2017 IPR001453 MoaB/Mog domain LFZ55_RS16590 6c3c5db9e7d1fa1c986e0a144cf06d14 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 4.7E-82 T 06-07-2017 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 LFZ55_RS02595 7d3e19871d2e8cb5fea5ea1141d72a9f 210 SUPERFAMILY SSF56112 13 160 4.6E-8 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS02595 7d3e19871d2e8cb5fea5ea1141d72a9f 210 Gene3D G3DSA:3.30.200.20 16 138 9.7E-4 T 06-07-2017 LFZ55_RS02595 7d3e19871d2e8cb5fea5ea1141d72a9f 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 1.5E-65 T 06-07-2017 IPR019647 PhoP regulatory network protein YrbL LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:3.30.70.1430 557 650 4.2E-14 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:1.20.1640.10 285 501 9.0E-58 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 136 182 3.87E-21 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 268 324 3.87E-21 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82714 703 785 9.55E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:3.30.2090.10 183 264 1.3E-14 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:3.30.2090.10 703 784 2.2E-15 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 665 701 7.85E-5 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 788 834 7.85E-5 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82714 183 266 2.75E-15 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.89 T 06-07-2017 IPR023931 Multidrug resistance protein MdtC LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-86 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82866 812 1010 3.27E-44 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 555 650 3.31E-19 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:3.30.70.1430 40 142 3.0E-29 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 Gene3D G3DSA:1.10.3850.10 794 1010 1.9E-53 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82693 40 135 9.59E-23 T 06-07-2017 LFZ55_RS08610 bae5c5fdc39386f0cfb766cc3e9c27f3 1026 SUPERFAMILY SSF82866 291 490 2.88E-48 T 06-07-2017 LFZ55_RS09095 b632551edc642d2b789cc00a3870e48a 189 Gene3D G3DSA:3.40.50.150 9 187 7.5E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09095 b632551edc642d2b789cc00a3870e48a 189 SUPERFAMILY SSF53335 3 149 1.44E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09095 b632551edc642d2b789cc00a3870e48a 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 2.6E-43 T 06-07-2017 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 LFZ55_RS09095 b632551edc642d2b789cc00a3870e48a 189 Pfam PF05175 Methyltransferase small domain 22 131 6.7E-9 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.0E-48 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 SUPERFAMILY SSF53639 2 223 1.24E-70 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 75.91 T 06-07-2017 LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 Gene3D G3DSA:3.40.225.10 3 231 9.3E-75 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.5E-133 T 06-07-2017 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 LFZ55_RS19895 6059f8cd5d3fdd4b6d08b4d47722a952 231 SMART SM01007 7 198 2.2E-71 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS03605 0145deacc360f81bb0a4eb368997132f 159 SUPERFAMILY SSF141452 2 157 9.55E-45 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS03605 0145deacc360f81bb0a4eb368997132f 159 Pfam PF05638 Type VI secretion system effector, Hcp 5 134 4.7E-35 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS03605 0145deacc360f81bb0a4eb368997132f 159 Gene3D G3DSA:2.30.110.20 4 156 9.0E-51 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS03605 0145deacc360f81bb0a4eb368997132f 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 13 143 4.4E-18 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 3.8E-113 T 06-07-2017 IPR017685 HTH-type transcriptional regulator ArgP LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 Pfam PF03466 LysR substrate binding domain 93 288 3.6E-12 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 Gene3D G3DSA:1.10.10.10 1 73 6.9E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 Gene3D G3DSA:3.40.190.10 92 196 1.2E-39 T 06-07-2017 LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.856 T 06-07-2017 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.4E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 SUPERFAMILY SSF46785 4 110 7.1E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04035 4c1fdc3a07adac726de63994a39db3a7 297 SUPERFAMILY SSF53850 92 289 3.98E-19 T 06-07-2017 LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 Pfam PF01432 Peptidase family M3 222 677 1.4E-176 T 06-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 Gene3D G3DSA:1.10.1370.10 140 349 2.0E-147 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 Gene3D G3DSA:1.10.1370.10 505 678 2.0E-147 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 Gene3D G3DSA:1.20.1050.40 9 138 4.1E-24 T 06-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 Gene3D G3DSA:3.40.390.10 360 504 1.6E-61 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LFZ55_RS01225 8b01eac8113c2a8f86197eb5255e771a 680 SUPERFAMILY SSF55486 1 677 1.15E-216 T 06-07-2017 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Pfam PF00136 DNA polymerase family B 398 735 1.4E-40 T 06-07-2017 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Gene3D G3DSA:3.90.1600.10 401 431 3.1E-10 T 06-07-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Gene3D G3DSA:3.90.1600.10 512 641 3.1E-10 T 06-07-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 196 296 5.7E-7 T 06-07-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 71 164 1.7E-5 T 06-07-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 SUPERFAMILY SSF53098 3 389 3.7E-96 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 SUPERFAMILY SSF56672 394 783 5.34E-113 T 06-07-2017 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 06-07-2017 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 SMART SM00486 148 555 2.2E-77 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS19910 7a70cf8d23228e5a25421777ffef782c 783 Gene3D G3DSA:3.30.420.10 148 365 1.0E-35 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 SUPERFAMILY SSF52540 4 243 1.73E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Pfam PF08402 TOBE domain 281 351 2.5E-7 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 SMART SM00382 29 219 2.7E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Gene3D G3DSA:2.40.50.100 240 285 3.1E-20 T 06-07-2017 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Gene3D G3DSA:2.40.50.100 345 359 3.1E-20 T 06-07-2017 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Gene3D G3DSA:3.40.50.300 3 235 1.0E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Gene3D G3DSA:2.40.50.140 286 344 1.2E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 Pfam PF00005 ABC transporter 21 162 5.1E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS11460 f0abd4edcec1b09670e355fc38bdb6e9 359 SUPERFAMILY SSF50331 237 359 3.16E-26 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 Gene3D G3DSA:3.30.750.24 451 559 3.4E-13 T 06-07-2017 IPR002645 STAS domain LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 5.4E-146 T 06-07-2017 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 06-07-2017 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 SUPERFAMILY SSF52091 451 558 1.02E-14 T 06-07-2017 IPR002645 STAS domain LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 Pfam PF00916 Sulfate permease family 29 411 4.0E-76 T 06-07-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LFZ55_RS10850 31df4a2df6afc60c5a120789c3b15c0d 561 Pfam PF01740 STAS domain 452 552 2.3E-12 T 06-07-2017 IPR002645 STAS domain LFZ55_RS13420 e64c1e6acba958187eb6ceace4bcba56 277 SUPERFAMILY SSF47454 177 234 6.8E-5 T 06-07-2017 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 LFZ55_RS13420 e64c1e6acba958187eb6ceace4bcba56 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 1.7E-72 T 06-07-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 LFZ55_RS13420 e64c1e6acba958187eb6ceace4bcba56 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.013 T 06-07-2017 IPR026530 Phosphoenolpyruvate synthase regulatory protein LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 Gene3D G3DSA:1.20.58.340 147 244 9.9E-16 T 06-07-2017 LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 Gene3D G3DSA:1.20.58.340 252 327 1.9E-17 T 06-07-2017 LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 Pfam PF01544 CorA-like Mg2+ transporter protein 38 323 9.3E-63 T 06-07-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 SUPERFAMILY SSF144083 265 324 1.19E-12 T 06-07-2017 LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 71.874 T 06-07-2017 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 LFZ55_RS11600 42b5d0a95fd3298b5585ab780ca8cc91 327 SUPERFAMILY SSF143865 7 255 1.83E-49 T 06-07-2017 LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 Pfam PF04993 TfoX N-terminal domain 14 106 1.5E-25 T 06-07-2017 IPR007076 TfoX, N-terminal LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 PIRSF PIRSF028788 1 200 1.3E-53 T 06-07-2017 IPR026256 Transcriptional regulator, TfoX/Sxy-type LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 Gene3D G3DSA:3.30.1460.30 5 107 9.2E-34 T 06-07-2017 IPR007076 TfoX, N-terminal LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 Pfam PF04994 TfoX C-terminal domain 116 194 7.7E-27 T 06-07-2017 IPR007077 TfoX, C-terminal LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 SUPERFAMILY SSF159894 13 107 1.75E-27 T 06-07-2017 LFZ55_RS15540 0c2c26a56ad06554376a17ef79550953 201 Gene3D G3DSA:1.10.150.20 117 199 1.7E-28 T 06-07-2017 LFZ55_RS10510 1ed4736563679d035729f7f278b40ce6 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 365.672 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 LFZ55_RS10510 1ed4736563679d035729f7f278b40ce6 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 3.3E-298 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 LFZ55_RS10510 1ed4736563679d035729f7f278b40ce6 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 9.0E-296 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 LFZ55_RS18455 d08fcc0b64bad99ec125e4754b785391 400 Gene3D G3DSA:3.60.21.10 1 272 1.3E-67 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS18455 d08fcc0b64bad99ec125e4754b785391 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 277 373 5.3E-24 T 06-07-2017 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LFZ55_RS18455 d08fcc0b64bad99ec125e4754b785391 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 253 1.4E-89 T 06-07-2017 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 LFZ55_RS18455 d08fcc0b64bad99ec125e4754b785391 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 2.3E-16 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS18455 d08fcc0b64bad99ec125e4754b785391 400 SUPERFAMILY SSF56300 1 335 1.21E-59 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS19105 8d1ec17e6cc78b5ce74c481256934b20 256 Pfam PF08241 Methyltransferase domain 49 145 8.1E-26 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LFZ55_RS19105 8d1ec17e6cc78b5ce74c481256934b20 256 Gene3D G3DSA:3.40.50.150 36 241 7.2E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS19105 8d1ec17e6cc78b5ce74c481256934b20 256 SUPERFAMILY SSF53335 11 242 1.06E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16290 6d36186f35714cb66bd9594d46c5fb9d 189 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 82 181 1.2E-24 T 06-07-2017 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 LFZ55_RS16290 6d36186f35714cb66bd9594d46c5fb9d 189 Gene3D G3DSA:1.10.260.40 17 71 4.5E-4 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS16290 6d36186f35714cb66bd9594d46c5fb9d 189 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 9 73 1.2E-27 T 06-07-2017 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 LFZ55_RS07760 89d3e202e2032cf5142cbbfdc13d6927 548 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 2 548 41.599 T 06-07-2017 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 LFZ55_RS07760 89d3e202e2032cf5142cbbfdc13d6927 548 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 5 238 1.9E-57 T 06-07-2017 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 LFZ55_RS20040 c5ca3893c9bc9c7d1787c3bddea0f1c5 96 Pfam PF07338 Protein of unknown function (DUF1471) 35 92 1.9E-18 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS20040 c5ca3893c9bc9c7d1787c3bddea0f1c5 96 Gene3D G3DSA:3.30.1660.10 29 92 3.0E-22 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS20040 c5ca3893c9bc9c7d1787c3bddea0f1c5 96 SUPERFAMILY SSF159871 1 92 9.16E-25 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21255 5300d6860bf0b7060f379f420afa8d36 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 150 5.7E-56 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS21255 5300d6860bf0b7060f379f420afa8d36 150 SUPERFAMILY SSF51197 1 149 7.96E-43 T 06-07-2017 LFZ55_RS21255 5300d6860bf0b7060f379f420afa8d36 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 1.1E-43 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS21255 5300d6860bf0b7060f379f420afa8d36 150 Gene3D G3DSA:2.60.120.370 1 149 4.3E-48 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS23875 0240f738bbfc4a5f22a614130e753fb9 247 Pfam PF01048 Phosphorylase superfamily 15 200 1.2E-36 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS23875 0240f738bbfc4a5f22a614130e753fb9 247 Gene3D G3DSA:3.40.50.1580 2 238 2.2E-68 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS23875 0240f738bbfc4a5f22a614130e753fb9 247 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 06-07-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 LFZ55_RS23875 0240f738bbfc4a5f22a614130e753fb9 247 SUPERFAMILY SSF53167 2 203 5.37E-65 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS24635 fbd00f9f6d422ee97c1ae2db19685b09 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 9 100 6.0E-47 T 06-07-2017 IPR002712 Toxin CcdB GO:0006276|GO:0008657 LFZ55_RS24635 fbd00f9f6d422ee97c1ae2db19685b09 101 SUPERFAMILY SSF50118 1 101 5.23E-33 T 06-07-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor LFZ55_RS24635 fbd00f9f6d422ee97c1ae2db19685b09 101 Gene3D G3DSA:2.30.30.110 1 101 4.0E-46 T 06-07-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor LFZ55_RS24635 fbd00f9f6d422ee97c1ae2db19685b09 101 Pfam PF01845 CcdB protein 2 100 4.5E-28 T 06-07-2017 IPR002712 Toxin CcdB GO:0006276|GO:0008657 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 1.7E-53 T 06-07-2017 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 8.8E-46 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 PIRSF PIRSF029225 2 131 7.0E-48 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 SUPERFAMILY SSF102220 27 136 8.11E-35 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 4.0E-44 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS20500 f1a0f2243737302baebb60ec7a5ef9d2 145 Gene3D G3DSA:3.40.50.10220 26 136 2.6E-45 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Gene3D G3DSA:2.60.40.10 236 276 2.1E-4 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Pfam PF12245 Bacterial Ig-like domain (group 3) 371 390 0.46 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Pfam PF12245 Bacterial Ig-like domain (group 3) 653 671 0.58 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Pfam PF12245 Bacterial Ig-like domain (group 3) 846 866 0.16 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Pfam PF12245 Bacterial Ig-like domain (group 3) 566 593 0.16 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Gene3D G3DSA:2.60.40.1560 700 775 1.8E-4 T 06-07-2017 LFZ55_RS21425 e06bec27f4defba3368883f634d53d27 1402 Gene3D G3DSA:2.60.40.1560 422 493 8.4E-6 T 06-07-2017 LFZ55_RS15970 deb233b6edc2577575bcaac9d05a1599 477 Pfam PF13460 NAD(P)H-binding 9 146 6.2E-15 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15970 deb233b6edc2577575bcaac9d05a1599 477 Pfam PF11066 Protein of unknown function (DUF2867) 332 463 4.6E-12 T 06-07-2017 IPR021295 Protein of unknown function DUF2867 LFZ55_RS15970 deb233b6edc2577575bcaac9d05a1599 477 SUPERFAMILY SSF51735 3 295 1.5E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15970 deb233b6edc2577575bcaac9d05a1599 477 Gene3D G3DSA:3.40.50.720 3 221 6.2E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 Gene3D G3DSA:3.30.60.20 142 191 1.7E-20 T 06-07-2017 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 SUPERFAMILY SSF57716 142 190 7.13E-17 T 06-07-2017 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 Pfam PF00265 Thymidine kinase 2 186 9.3E-66 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.268 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 06-07-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 PIRSF PIRSF035805 1 200 1.6E-57 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LFZ55_RS11015 1880ebf4a0918f42ec7951aa34cdb127 205 SUPERFAMILY SSF52540 1 141 1.02E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 SUPERFAMILY SSF51182 2 262 6.56E-106 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 Gene3D G3DSA:2.60.120.520 20 133 3.4E-53 T 06-07-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.481 T 06-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 PIRSF PIRSF006625 1 278 7.9E-131 T 06-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 Gene3D G3DSA:2.60.120.500 134 278 1.3E-78 T 06-07-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 LFZ55_RS04330 3e5635975bff78f63d812e937358555f 278 Pfam PF04962 KduI/IolB family 34 273 1.7E-37 T 06-07-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 LFZ55_RS12380 73aebfb022efd1a36825792b1076f848 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 3.3E-53 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LFZ55_RS12380 73aebfb022efd1a36825792b1076f848 165 PIRSF PIRSF028301 1 165 8.5E-54 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LFZ55_RS12380 73aebfb022efd1a36825792b1076f848 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 159 2.2E-51 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LFZ55_RS11125 bea00b35b5e91505055b3c9d2c431f73 167 SUPERFAMILY SSF47240 1 154 6.49E-53 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS11125 bea00b35b5e91505055b3c9d2c431f73 167 Gene3D G3DSA:1.20.1260.10 1 165 2.6E-68 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS11125 bea00b35b5e91505055b3c9d2c431f73 167 Pfam PF05974 Domain of unknown function (DUF892) 5 162 5.2E-57 T 06-07-2017 IPR010287 Domain of unknown function DUF892 LFZ55_RS03105 5378e60f3614eba9b22b2aa2b9e0c005 495 Pfam PF08666 SAF domain 10 81 2.5E-13 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 LFZ55_RS03105 5378e60f3614eba9b22b2aa2b9e0c005 495 SMART SM00858 10 81 1.4E-16 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 LFZ55_RS03105 5378e60f3614eba9b22b2aa2b9e0c005 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 2.1E-154 T 06-07-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 SUPERFAMILY SSF53720 3 480 1.31E-167 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 Gene3D G3DSA:3.40.309.10 258 449 1.4E-68 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 Gene3D G3DSA:3.40.605.10 2 257 1.1E-98 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 2.0E-224 T 06-07-2017 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 LFZ55_RS15000 2d967e7d4ad0548dea5b58e87f68965a 488 Pfam PF00171 Aldehyde dehydrogenase family 17 474 2.0E-172 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS08255 eef71822736b85532fa498fb0f0d6862 489 PIRSF PIRSF006060 1 485 1.9E-78 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS08255 eef71822736b85532fa498fb0f0d6862 489 Pfam PF00324 Amino acid permease 21 476 2.6E-145 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS08255 eef71822736b85532fa498fb0f0d6862 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS16370 22b60440a5c4a4bd142f8f728ba03a15 512 PIRSF PIRSF002741 8 511 1.6E-110 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS16370 22b60440a5c4a4bd142f8f728ba03a15 512 SUPERFAMILY SSF53850 30 511 3.93E-146 T 06-07-2017 LFZ55_RS16370 22b60440a5c4a4bd142f8f728ba03a15 512 Gene3D G3DSA:3.40.190.10 130 280 2.6E-51 T 06-07-2017 LFZ55_RS16370 22b60440a5c4a4bd142f8f728ba03a15 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 429 1.3E-100 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS16370 22b60440a5c4a4bd142f8f728ba03a15 512 Gene3D G3DSA:3.10.105.10 281 481 1.6E-62 T 06-07-2017 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Gene3D G3DSA:3.40.640.10 130 423 5.7E-101 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 PIRSF PIRSF009393 1 712 8.2E-286 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 4.4E-197 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.1E-45 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.6E-26 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Gene3D G3DSA:3.90.1150.10 426 586 2.7E-65 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 Gene3D G3DSA:3.90.100.10 587 712 2.6E-39 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 SUPERFAMILY SSF55904 568 709 1.15E-44 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LFZ55_RS06090 0f9b1e39e8b018d72e3ab29ab5a1992b 714 SUPERFAMILY SSF53383 130 562 2.37E-106 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 1.5E-75 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Gene3D G3DSA:1.10.220.30 8 71 5.9E-15 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 PIRSF PIRSF003161 1 331 2.3E-117 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Gene3D G3DSA:1.10.220.30 74 183 4.3E-28 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Gene3D G3DSA:1.10.220.30 194 330 3.2E-41 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Pfam PF14841 FliG middle domain 115 186 6.1E-24 T 06-07-2017 IPR032779 Flagellar motor switch protein FliG, middle domain LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 SUPERFAMILY SSF48029 115 324 4.97E-63 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Pfam PF14842 FliG N-terminal domain 3 103 1.4E-29 T 06-07-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 Pfam PF01706 FliG C-terminal domain 218 323 7.7E-38 T 06-07-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 SUPERFAMILY SSF48029 5 104 1.8E-18 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical LFZ55_RS09575 ae049248f0af0178a73a583d5caebe90 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 331 5.0E-150 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LFZ55_RS21885 42f02b4a267864b5b52e3b589a9b5278 413 Pfam PF13520 Amino acid permease 8 372 5.3E-26 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS21885 42f02b4a267864b5b52e3b589a9b5278 413 PIRSF PIRSF006060 1 408 2.1E-51 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS17030 524c0522c423d448f176c3145234d0c5 310 Pfam PF02626 Allophanate hydrolase subunit 2 25 281 6.7E-92 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B LFZ55_RS17030 524c0522c423d448f176c3145234d0c5 310 SUPERFAMILY SSF50891 173 288 1.1E-11 T 06-07-2017 IPR029000 Cyclophilin-like domain LFZ55_RS17030 524c0522c423d448f176c3145234d0c5 310 SMART SM00797 23 298 7.8E-146 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B LFZ55_RS17030 524c0522c423d448f176c3145234d0c5 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 5.2E-132 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B LFZ55_RS15510 b1527dfe9aad3ab62130c694dd6ebbe8 138 SUPERFAMILY SSF51735 5 136 2.01E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15510 b1527dfe9aad3ab62130c694dd6ebbe8 138 Pfam PF13380 CoA binding domain 15 131 6.1E-40 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS15510 b1527dfe9aad3ab62130c694dd6ebbe8 138 Gene3D G3DSA:3.40.50.720 4 136 7.1E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS15510 b1527dfe9aad3ab62130c694dd6ebbe8 138 SMART SM00881 11 105 1.9E-25 T 06-07-2017 IPR003781 CoA-binding GO:0048037 LFZ55_RS07255 5ee84db0aba9839759d8f9e8739b03cb 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 5.0E-37 T 06-07-2017 IPR024470 Protein of unknown function DUF2545 LFZ55_RS07255 5ee84db0aba9839759d8f9e8739b03cb 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 1.5E-43 T 06-07-2017 IPR024470 Protein of unknown function DUF2545 LFZ55_RS10105 e94394ec11bc1585b401f07ddb34f473 143 SUPERFAMILY SSF53098 58 141 1.2E-14 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10105 e94394ec11bc1585b401f07ddb34f473 143 Pfam PF00665 Integrase core domain 66 141 7.9E-9 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS10105 e94394ec11bc1585b401f07ddb34f473 143 Pfam PF13276 HTH-like domain 4 48 8.7E-7 T 06-07-2017 IPR025948 HTH-like domain LFZ55_RS10105 e94394ec11bc1585b401f07ddb34f473 143 Gene3D G3DSA:3.30.420.10 60 141 9.0E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS21200 3f0a3dc90d430fa29c95c74fc8695c3c 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 1.7E-138 T 06-07-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 LFZ55_RS21200 3f0a3dc90d430fa29c95c74fc8695c3c 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 6.1E-73 T 06-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0025 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 SUPERFAMILY SSF54862 3 199 3.87E-70 T 06-07-2017 LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 Gene3D G3DSA:3.30.70.20 78 118 2.2E-25 T 06-07-2017 LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 2.8E-80 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 Gene3D G3DSA:3.30.70.20 3 77 3.9E-15 T 06-07-2017 LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 3.8E-29 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS15805 fa19fa1a8e8edc16e0b11586a9ed6a5f 205 Gene3D G3DSA:3.30.70.20 119 174 5.1E-19 T 06-07-2017 LFZ55_RS00625 d26c7b1dcd1b256a546ebb3f8f152b63 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 326 1.4E-70 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LFZ55_RS00625 d26c7b1dcd1b256a546ebb3f8f152b63 356 Gene3D G3DSA:3.40.50.2000 171 343 2.7E-48 T 06-07-2017 LFZ55_RS00625 d26c7b1dcd1b256a546ebb3f8f152b63 356 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 7 344 5.6E-149 T 06-07-2017 IPR011916 Lipopolysaccharide heptosyltransferase III, putative LFZ55_RS00625 d26c7b1dcd1b256a546ebb3f8f152b63 356 SUPERFAMILY SSF53756 6 344 6.12E-81 T 06-07-2017 LFZ55_RS00625 d26c7b1dcd1b256a546ebb3f8f152b63 356 Gene3D G3DSA:3.40.50.2000 6 155 2.7E-40 T 06-07-2017 LFZ55_RS24615 9119fa19cf789cb96e317ed057a6c85d 564 Pfam PF14284 PcfJ-like protein 458 541 2.5E-8 T 06-07-2017 IPR025586 PcfJ-like protein LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 414 1.1E-31 T 06-07-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 Gene3D G3DSA:3.90.110.10 169 438 6.7E-77 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 8.4E-73 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 171 - T 06-07-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 SUPERFAMILY SSF56327 172 442 4.59E-69 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.5E-50 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 Gene3D G3DSA:3.40.50.720 1 167 7.0E-72 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16755 2a827780afcf1492872c3176860a541a 450 SUPERFAMILY SSF51735 2 166 4.4E-55 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11290 154f8af2fa70b3bca9c74fb13833abff 381 SUPERFAMILY SSF69118 220 379 1.18E-11 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS11290 154f8af2fa70b3bca9c74fb13833abff 381 SUPERFAMILY SSF69118 79 182 1.84E-11 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS11290 154f8af2fa70b3bca9c74fb13833abff 381 Gene3D G3DSA:1.20.1290.10 80 183 6.3E-13 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS11290 154f8af2fa70b3bca9c74fb13833abff 381 Gene3D G3DSA:1.20.1290.10 267 380 8.3E-17 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS06920 ff88bd3305222465a79fbb2eba7be3ce 338 Gene3D G3DSA:3.40.50.10750 135 296 1.0E-63 T 06-07-2017 LFZ55_RS06920 ff88bd3305222465a79fbb2eba7be3ce 338 PIRSF PIRSF000428 1 327 1.2E-107 T 06-07-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS06920 ff88bd3305222465a79fbb2eba7be3ce 338 SUPERFAMILY SSF53659 3 321 2.71E-80 T 06-07-2017 LFZ55_RS06920 ff88bd3305222465a79fbb2eba7be3ce 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 1.3E-99 T 06-07-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS06920 ff88bd3305222465a79fbb2eba7be3ce 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 320 3.5E-118 T 06-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LFZ55_RS07705 14925e6ae0e3334001dae93968e52297 153 SUPERFAMILY SSF55729 1 150 2.13E-32 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS07705 14925e6ae0e3334001dae93968e52297 153 Gene3D G3DSA:3.40.630.30 2 148 1.4E-45 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS07705 14925e6ae0e3334001dae93968e52297 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 2.1E-14 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 Gene3D G3DSA:3.40.1740.10 131 177 6.5E-36 T 06-07-2017 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 Gene3D G3DSA:3.40.1740.10 2 40 6.5E-36 T 06-07-2017 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 Gene3D G3DSA:3.30.70.1300 41 130 1.4E-27 T 06-07-2017 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 6.3E-49 T 06-07-2017 IPR003774 Protein of unknown function UPF0301 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 SUPERFAMILY SSF143456 1 187 2.62E-65 T 06-07-2017 LFZ55_RS03845 4502358b2e4139e09ec454f3595433b7 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.134 T 06-07-2017 IPR003774 Protein of unknown function UPF0301 LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 Gene3D G3DSA:2.60.120.10 85 177 1.9E-31 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 SMART SM00530 11 66 2.2E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 Pfam PF01381 Helix-turn-helix 12 64 1.1E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 SUPERFAMILY SSF47413 3 71 6.97E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 Pfam PF07883 Cupin domain 105 171 4.4E-8 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 Gene3D G3DSA:1.10.260.40 2 76 1.5E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS11945 ad0c563301be2a074f1bb64bd2e27b63 178 SUPERFAMILY SSF51182 51 176 4.58E-23 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 Pfam PF00005 ABC transporter 17 172 2.0E-20 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 SMART SM00382 26 223 8.5E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 Gene3D G3DSA:3.40.50.300 1 236 5.7E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.3E-114 T 06-07-2017 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 LFZ55_RS13365 1784a81fff55e31faf5cde1182993eed 248 SUPERFAMILY SSF52540 2 231 2.86E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10095 7dd489ced6353217e46cceac805ec000 94 Gene3D G3DSA:1.10.10.60 7 88 1.5E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10095 7dd489ced6353217e46cceac805ec000 94 SUPERFAMILY SSF46689 1 92 1.97E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10095 7dd489ced6353217e46cceac805ec000 94 Pfam PF01527 Transposase 4 72 3.9E-16 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 SUPERFAMILY SSF50621 296 451 3.98E-36 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 304 323 1.5E-11 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 209 222 1.5E-11 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 95 1.5E-11 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 420 433 1.5E-11 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 Gene3D G3DSA:2.40.37.10 300 463 1.1E-31 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 SUPERFAMILY SSF51419 45 316 9.01E-60 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 Gene3D G3DSA:3.20.20.10 55 299 1.6E-65 T 06-07-2017 IPR029066 PLP-binding barrel LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 319 440 1.1E-14 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 LFZ55_RS07455 7875f4a62f593766250d2ca9a5fbb8fd 465 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 56 314 3.1E-39 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 LFZ55_RS24890 43beef385b8b60441679f31dd49d9e8a 210 Pfam PF12477 Sex factor F TraW protein N terminal 3 30 1.6E-9 T 06-07-2017 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain LFZ55_RS24890 43beef385b8b60441679f31dd49d9e8a 210 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 7 203 9.1E-77 T 06-07-2017 IPR014114 Type-F conjugative transfer system protein TraW LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 SUPERFAMILY SSF52768 11 312 1.37E-78 T 06-07-2017 LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 Gene3D G3DSA:3.40.800.10 5 312 4.2E-95 T 06-07-2017 IPR023696 Ureohydrolase domain LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 310 41.397 T 06-07-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 Pfam PF00491 Arginase family 45 308 2.6E-51 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 PIRSF PIRSF036979 24 312 1.8E-25 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 LFZ55_RS16665 8d6de464a4712d795251e7d018f390c3 313 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 308 4.2E-81 T 06-07-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 SUPERFAMILY SSF52518 575 791 3.43E-52 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 PIRSF PIRSF000157 1 932 0.0 T 06-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 06-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 789 930 3.3E-55 T 06-07-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Pfam PF00676 Dehydrogenase E1 component 219 511 1.4E-47 T 06-07-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Gene3D G3DSA:3.40.50.970 592 787 1.7E-25 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 SUPERFAMILY SSF52518 120 545 2.18E-88 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Gene3D G3DSA:3.40.50.970 162 549 3.4E-78 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.7E-14 T 06-07-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 2.5E-66 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS16910 b3a5ff7bedb045e388876247939d11b5 933 SMART SM00861 591 784 1.7E-64 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.759 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 PIRSF PIRSF003078 1 207 4.7E-68 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 SUPERFAMILY SSF53335 4 205 8.9E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 Gene3D G3DSA:3.40.50.150 4 205 1.9E-75 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 1.4E-61 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LFZ55_RS24050 6fbc1e1c286d7d218da01a98f670185e 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 3.0E-67 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.3E-27 T 06-07-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 7.4E-41 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 SMART SM00905 4 114 1.7E-46 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 SUPERFAMILY SSF55620 1 115 6.12E-36 T 06-07-2017 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.5E-31 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS03230 0d5699782b9b15e9964bbbb31cb65421 119 Gene3D G3DSA:3.30.1130.10 1 115 3.2E-42 T 06-07-2017 LFZ55_RS11555 e3935ab4b438d755d072a3a40f4bc03e 228 Pfam PF03483 B3/4 domain 63 194 3.7E-16 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LFZ55_RS11555 e3935ab4b438d755d072a3a40f4bc03e 228 SMART SM00873 61 217 1.8E-13 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LFZ55_RS11555 e3935ab4b438d755d072a3a40f4bc03e 228 SUPERFAMILY SSF56037 51 220 5.75E-25 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LFZ55_RS11555 e3935ab4b438d755d072a3a40f4bc03e 228 Gene3D G3DSA:3.50.40.10 60 187 6.5E-8 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LFZ55_RS20140 d02a05bda98b0c0b9caea21f212bde52 497 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 06-07-2017 IPR024607 Sulfatase, conserved site LFZ55_RS20140 d02a05bda98b0c0b9caea21f212bde52 497 Gene3D G3DSA:3.40.720.10 28 400 4.2E-114 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS20140 d02a05bda98b0c0b9caea21f212bde52 497 SUPERFAMILY SSF53649 29 478 2.02E-123 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20140 d02a05bda98b0c0b9caea21f212bde52 497 Pfam PF00884 Sulfatase 31 378 3.0E-72 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS20140 d02a05bda98b0c0b9caea21f212bde52 497 Gene3D G3DSA:3.30.1120.10 421 479 1.0E-9 T 06-07-2017 LFZ55_RS22570 7c79a73b5ad6b24015f49c02d664ae6a 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 4.1E-265 T 06-07-2017 IPR010344 Exopolysaccharide biosynthesis protein YbjH LFZ55_RS06550 9743a4204ec0ce29c71aba8e97fa364c 134 Pfam PF16931 Putative phage holin 1 125 9.8E-17 T 06-07-2017 IPR032637 Putative phage holin-like LFZ55_RS06675 9743a4204ec0ce29c71aba8e97fa364c 134 Pfam PF16931 Putative phage holin 1 125 9.8E-17 T 06-07-2017 IPR032637 Putative phage holin-like LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.1E-185 T 06-07-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 74.911 T 06-07-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 Gene3D G3DSA:3.90.1150.10 285 400 1.9E-28 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 SUPERFAMILY SSF53383 4 402 5.44E-129 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 Pfam PF00266 Aminotransferase class-V 26 394 4.2E-155 T 06-07-2017 IPR000192 Aminotransferase class V domain LFZ55_RS13355 07be1cc653bea7c38068474ca66c9971 406 Gene3D G3DSA:3.40.640.10 36 284 3.0E-86 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 6.7E-213 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 SUPERFAMILY SSF51998 5 808 4.88E-231 T 06-07-2017 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 Pfam PF01228 Glycine radical 688 791 7.6E-30 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 06-07-2017 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 Gene3D G3DSA:3.20.70.20 7 808 3.1E-268 T 06-07-2017 LFZ55_RS16400 90e771a578912e3f207af89c17de2a4f 810 PIRSF PIRSF000379 32 810 1.4E-195 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 LFZ55_RS24965 ae40b70eed4f99cd2096d8b800b327e3 229 SUPERFAMILY SSF46894 152 215 5.44E-7 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS24965 ae40b70eed4f99cd2096d8b800b327e3 229 Gene3D G3DSA:1.10.10.10 160 215 1.4E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 PIRSF PIRSF001555 1 329 4.6E-150 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 Gene3D G3DSA:3.30.930.10 2 326 5.3E-152 T 06-07-2017 LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.9E-93 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.904 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 SUPERFAMILY SSF55681 7 328 3.98E-97 T 06-07-2017 LFZ55_RS24030 9224d4d2dc786c3e9effa5a14326c13e 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 3.2E-195 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LFZ55_RS01640 b4cff5240ca75c2c6ff4e02f8cf46aaa 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 304 5.8E-59 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS01640 b4cff5240ca75c2c6ff4e02f8cf46aaa 308 Pfam PF04754 Putative transposase, YhgA-like 8 209 1.3E-89 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS00860 5f7697f8246a6a91b74c95badb5e4685 154 SUPERFAMILY SSF51197 1 154 6.04E-45 T 06-07-2017 LFZ55_RS00860 5f7697f8246a6a91b74c95badb5e4685 154 Gene3D G3DSA:2.60.120.370 1 153 1.4E-50 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS00860 5f7697f8246a6a91b74c95badb5e4685 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.9E-60 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS00860 5f7697f8246a6a91b74c95badb5e4685 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 9.2E-43 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS17930 45b2c10417375b4a877678f613cc6ece 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 5.7E-107 T 06-07-2017 IPR005226 UPF0014 family LFZ55_RS17930 45b2c10417375b4a877678f613cc6ece 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 8.5E-83 T 06-07-2017 IPR005226 UPF0014 family LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 Gene3D G3DSA:1.10.1370.10 504 678 1.1E-105 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 Gene3D G3DSA:1.10.1370.10 145 351 1.1E-105 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 Gene3D G3DSA:1.20.1050.40 13 142 2.0E-17 T 06-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 SUPERFAMILY SSF55486 4 678 4.98E-167 T 06-07-2017 LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 Gene3D G3DSA:3.40.390.10 361 503 1.9E-50 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LFZ55_RS12625 6e5ddbaa266efbd46a0c8f7e32c9e8a4 680 Pfam PF01432 Peptidase family M3 230 675 1.1E-134 T 06-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 2 406 94.901 T 06-07-2017 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 Gene3D G3DSA:3.30.1540.10 228 311 3.0E-4 T 06-07-2017 LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 Gene3D G3DSA:3.40.50.10540 11 217 4.0E-75 T 06-07-2017 IPR023606 CoA-transferase family III domain LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 Gene3D G3DSA:3.40.50.10540 312 402 4.0E-75 T 06-07-2017 IPR023606 CoA-transferase family III domain LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 Pfam PF02515 CoA-transferase family III 13 379 6.6E-93 T 06-07-2017 IPR003673 CoA-transferase family III GO:0003824 LFZ55_RS20020 38d2ee5697874d7d451de6cb368f0bce 406 SUPERFAMILY SSF89796 7 402 8.63E-99 T 06-07-2017 IPR023606 CoA-transferase family III domain LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Pfam PF12468 Type III secretion system leucine rich repeat protein 17 49 1.2E-4 T 06-07-2017 IPR032674 LRR-containing bacterial E3 ligase, N-terminal LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 291 499 2.3E-48 T 06-07-2017 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Gene3D G3DSA:3.80.10.10 44 166 4.9E-22 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Gene3D G3DSA:3.80.10.10 167 262 2.7E-15 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Gene3D G3DSA:1.20.58.360 359 495 1.9E-39 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SUPERFAMILY SSF52058 60 263 2.21E-28 T 06-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 Gene3D G3DSA:1.20.1270.130 277 356 6.3E-23 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 56 75 66.0 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 196 215 46.0 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 96 115 9.8 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 176 195 22.0 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 136 155 0.026 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 76 95 0.001 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 216 235 31.0 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 116 135 150.0 T 06-07-2017 LFZ55_RS14875 115e1523aa99acc8b699b7205aad9e48 585 SMART SM00364 156 175 29.0 T 06-07-2017 LFZ55_RS21695 ec80342e6ab97ade98c1de759087b248 178 Gene3D G3DSA:3.40.630.30 1 153 1.6E-30 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS21695 ec80342e6ab97ade98c1de759087b248 178 SUPERFAMILY SSF55729 1 153 1.28E-28 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS21695 ec80342e6ab97ade98c1de759087b248 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 150 2.8E-18 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 SUPERFAMILY SSF51735 48 293 6.57E-74 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 2.8E-5 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 2.8E-5 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 2.8E-5 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 2.2E-32 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 Gene3D G3DSA:3.40.50.720 45 292 3.2E-76 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS03445 fab05ff93a36a8163488316ad311708c 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 1.0E-57 T 06-07-2017 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 SMART SM00062 22 243 6.4E-88 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 Gene3D G3DSA:3.40.190.10 6 127 9.2E-47 T 06-07-2017 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 SUPERFAMILY SSF53850 1 242 1.25E-73 T 06-07-2017 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 Gene3D G3DSA:3.40.190.10 128 201 1.1E-28 T 06-07-2017 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 SMART SM00079 22 243 7.1E-5 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 9.7E-69 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS16000 fd2578cbaf3b5ecaed42923784e0a727 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 1.6E-93 T 06-07-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LFZ55_RS13435 eaf6f6fe0db073da376dac3ac687f932 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 45.577 T 06-07-2017 IPR003846 Uncharacterised protein family UPF0061 LFZ55_RS13435 eaf6f6fe0db073da376dac3ac687f932 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 452 7.2E-154 T 06-07-2017 IPR003846 Uncharacterised protein family UPF0061 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 Gene3D G3DSA:1.10.155.10 14 90 1.4E-34 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 SUPERFAMILY SSF53335 92 281 1.66E-60 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PIRSF PIRSF000410 9 285 1.6E-101 T 06-07-2017 IPR026024 Chemotaxis protein methyltransferase CheR LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 SUPERFAMILY SSF47757 14 91 5.1E-25 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 Gene3D G3DSA:3.40.50.150 91 281 2.1E-69 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 2.3E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 SMART SM00138 24 284 1.1E-126 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 1.7E-59 T 06-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LFZ55_RS09845 636f220508af34dcb8a20c40ea05c5aa 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 76 4.1E-18 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LFZ55_RS22915 5727590378841909631dad14099a0e48 618 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 618 7.9E-202 T 06-07-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 618 34.499 T 06-07-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 6.1E-28 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 Gene3D G3DSA:2.170.130.10 20 152 6.2E-39 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 Pfam PF00593 TonB dependent receptor 387 617 1.4E-27 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 601 618 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS22915 5727590378841909631dad14099a0e48 618 Gene3D G3DSA:2.40.170.20 153 618 8.0E-80 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS22915 5727590378841909631dad14099a0e48 618 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS22915 5727590378841909631dad14099a0e48 618 SUPERFAMILY SSF56935 26 618 8.24E-112 T 06-07-2017 LFZ55_RS08490 9dea230fdb824ab1b0f8de9888762e8b 51 SUPERFAMILY SSF160704 1 50 7.45E-10 T 06-07-2017 IPR009736 Protein of unknown function DUF1307 LFZ55_RS08490 9dea230fdb824ab1b0f8de9888762e8b 51 Gene3D G3DSA:3.30.1830.10 1 51 2.3E-11 T 06-07-2017 IPR009736 Protein of unknown function DUF1307 LFZ55_RS08490 9dea230fdb824ab1b0f8de9888762e8b 51 Pfam PF06998 Protein of unknown function (DUF1307) 1 48 1.9E-9 T 06-07-2017 IPR009736 Protein of unknown function DUF1307 LFZ55_RS21955 d3e8020f8a7837d21b68d51ba4f6237c 254 Pfam PF02432 Fimbrial, major and minor subunit 29 253 1.8E-48 T 06-07-2017 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 LFZ55_RS16180 40667cbebbe81e5fe95a69364a3733cc 97 Pfam PF04550 Phage holin family 2 1 86 5.6E-37 T 06-07-2017 IPR007633 Bacteriophage P2, GpY, holin LFZ55_RS16180 40667cbebbe81e5fe95a69364a3733cc 97 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 22 85 3.0E-10 T 06-07-2017 IPR007633 Bacteriophage P2, GpY, holin LFZ55_RS07785 9c1761e2f4df9a7a133434097ea06090 201 Gene3D G3DSA:3.40.50.1240 57 172 7.5E-11 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS07785 9c1761e2f4df9a7a133434097ea06090 201 SUPERFAMILY SSF53254 57 179 7.46E-16 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS07785 9c1761e2f4df9a7a133434097ea06090 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 57 139 3.2E-5 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS07785 9c1761e2f4df9a7a133434097ea06090 201 Hamap MF_01868 Lipopolysaccharide core heptose(II)-phosphate phosphatase [ais]. 1 201 60.367 T 06-07-2017 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 LFZ55_RS07785 9c1761e2f4df9a7a133434097ea06090 201 PIRSF PIRSF011416 1 201 1.7E-88 T 06-07-2017 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 LFZ55_RS14790 df1413487ee5653b68c98643dddb5f69 412 Gene3D G3DSA:3.40.50.620 21 182 8.6E-29 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS14790 df1413487ee5653b68c98643dddb5f69 412 SUPERFAMILY SSF69864 189 383 2.09E-41 T 06-07-2017 LFZ55_RS14790 df1413487ee5653b68c98643dddb5f69 412 SUPERFAMILY SSF52402 21 181 8.82E-27 T 06-07-2017 LFZ55_RS14790 df1413487ee5653b68c98643dddb5f69 412 Gene3D G3DSA:3.90.1260.10 189 384 3.4E-42 T 06-07-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS14790 df1413487ee5653b68c98643dddb5f69 412 Pfam PF00764 Arginosuccinate synthase 27 379 2.6E-64 T 06-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 62 86 6.8E-45 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 140 159 6.8E-45 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 220 233 6.8E-45 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 24 47 6.8E-45 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 189 211 6.8E-45 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 Pfam PF01292 Prokaryotic cytochrome b561 22 228 2.2E-31 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 20 233 1.8E-72 T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 189 206 - T 06-07-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 SUPERFAMILY SSF81342 18 238 8.63E-38 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS10600 1b3e0fa5979029b9b180df02ee9e6d38 243 Gene3D G3DSA:1.20.950.20 19 239 5.5E-26 T 06-07-2017 LFZ55_RS21245 3658c91567137b7f2558d21d92014fbd 138 SUPERFAMILY SSF89946 2 122 1.31E-42 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain LFZ55_RS21245 3658c91567137b7f2558d21d92014fbd 138 Pfam PF06877 Regulator of ribonuclease activity B 12 113 2.1E-34 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain LFZ55_RS21245 3658c91567137b7f2558d21d92014fbd 138 PIRSF PIRSF018193 1 138 1.0E-66 T 06-07-2017 IPR016716 Regulator of ribonuclease activity B LFZ55_RS21245 3658c91567137b7f2558d21d92014fbd 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.902 T 06-07-2017 IPR016716 Regulator of ribonuclease activity B LFZ55_RS21245 3658c91567137b7f2558d21d92014fbd 138 Gene3D G3DSA:3.30.70.970 1 124 3.7E-56 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain LFZ55_RS10785 7ea78f62ed54e60c315ecf34e91bf683 149 SUPERFAMILY SSF160719 25 132 4.32E-29 T 06-07-2017 LFZ55_RS10785 7ea78f62ed54e60c315ecf34e91bf683 149 Gene3D G3DSA:3.10.450.40 3 132 5.5E-41 T 06-07-2017 LFZ55_RS10785 7ea78f62ed54e60c315ecf34e91bf683 149 Pfam PF04965 Gene 25-like lysozyme 29 118 6.3E-22 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 PIRSF PIRSF004983 1 556 6.2E-183 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 534 3.3E-8 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 4.9E-138 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 185 388 1.5E-86 T 06-07-2017 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Gene3D G3DSA:3.90.400.10 195 240 2.3E-4 T 06-07-2017 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Gene3D G3DSA:3.40.50.970 345 546 1.8E-31 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 138 5.8E-27 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 SUPERFAMILY SSF52518 7 174 8.57E-31 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 SUPERFAMILY SSF52518 365 552 8.35E-34 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.494 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 LFZ55_RS07720 70d776b27ed985497df3fc15adbc9a46 556 Gene3D G3DSA:3.40.50.970 7 175 4.5E-43 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold LFZ55_RS11405 57060451820c23a436cee48e4f4da2b9 119 Pfam PF04024 PspC domain 8 65 2.3E-14 T 06-07-2017 IPR007168 Phage shock protein, PspC, N-terminal LFZ55_RS11405 57060451820c23a436cee48e4f4da2b9 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.9E-39 T 06-07-2017 IPR014320 Phage shock protein, PspC LFZ55_RS01910 ed141b05ff0cdfffd5229b2505b7033b 319 Pfam PF03547 Membrane transport protein 5 156 1.8E-33 T 06-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 Gene3D G3DSA:3.40.190.10 112 209 3.3E-18 T 06-07-2017 LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 2.4E-44 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 SUPERFAMILY SSF53850 23 252 6.67E-47 T 06-07-2017 LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 SMART SM00062 26 254 3.5E-35 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 Gene3D G3DSA:3.40.190.10 25 111 2.0E-27 T 06-07-2017 LFZ55_RS13880 50921c348dbcd7aec515bc1c932ac0f1 260 Gene3D G3DSA:3.40.190.10 213 252 2.0E-27 T 06-07-2017 LFZ55_RS17435 8a9a53e3646e96646658186b3f336e28 461 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.0E-190 T 06-07-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 LFZ55_RS17435 8a9a53e3646e96646658186b3f336e28 461 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 1.0E-132 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 Pfam PF03150 Di-haem cytochrome c peroxidase 185 332 3.6E-47 T 06-07-2017 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 Pfam PF14376 Haem-binding domain 18 152 7.0E-33 T 06-07-2017 IPR025992 Haem-binding domain LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 Gene3D G3DSA:1.10.760.10 337 461 4.0E-20 T 06-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 Gene3D G3DSA:1.10.760.10 175 336 8.6E-49 T 06-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 Pfam PF00034 Cytochrome c 340 453 7.6E-6 T 06-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 SUPERFAMILY SSF46626 319 463 1.89E-38 T 06-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 SMART SM01235 16 155 4.6E-51 T 06-07-2017 IPR025992 Haem-binding domain LFZ55_RS00115 afd114256bb63a74470eea168620223b 466 SUPERFAMILY SSF46626 165 320 2.42E-45 T 06-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 LFZ55_RS12810 62afe9371bac6c82da8b1d5606606363 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 460 1.5E-200 T 06-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 LFZ55_RS12810 62afe9371bac6c82da8b1d5606606363 462 Gene3D G3DSA:3.40.50.1220 287 462 8.1E-93 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS12810 62afe9371bac6c82da8b1d5606606363 462 SUPERFAMILY SSF52467 289 462 1.4E-78 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain LFZ55_RS12810 62afe9371bac6c82da8b1d5606606363 462 PIRSF PIRSF000204 1 462 6.2E-239 T 06-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 LFZ55_RS24670 aac191a1173be272d54e19f2ca1516e5 217 Gene3D G3DSA:3.40.30.10 34 213 4.3E-45 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24670 aac191a1173be272d54e19f2ca1516e5 217 SUPERFAMILY SSF52833 31 199 3.12E-30 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24670 aac191a1173be272d54e19f2ca1516e5 217 PIRSF PIRSF001488 24 213 3.0E-40 T 06-07-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LFZ55_RS24670 aac191a1173be272d54e19f2ca1516e5 217 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS24670 aac191a1173be272d54e19f2ca1516e5 217 Pfam PF01323 DSBA-like thioredoxin domain 46 202 4.1E-22 T 06-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 06-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 71 6.9E-39 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 06-07-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 LFZ55_RS15875 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 06-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LFZ55_RS10170 9994658dd4135c7c1fafa1fb04a1463b 243 SUPERFAMILY SSF56399 20 232 4.53E-44 T 06-07-2017 LFZ55_RS10170 9994658dd4135c7c1fafa1fb04a1463b 243 Pfam PF02917 Pertussis toxin, subunit 1 20 181 1.3E-14 T 06-07-2017 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 LFZ55_RS10170 9994658dd4135c7c1fafa1fb04a1463b 243 Gene3D G3DSA:3.90.210.10 19 237 1.0E-60 T 06-07-2017 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 Pfam PF13186 Iron-sulfur cluster-binding domain 282 343 2.9E-11 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 11 390 1.3E-154 T 06-07-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 150 412 8.0E-14 T 06-07-2017 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 SUPERFAMILY SSF102114 20 352 1.44E-39 T 06-07-2017 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 Gene3D G3DSA:3.20.20.70 20 361 1.1E-44 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 Pfam PF04055 Radical SAM superfamily 20 169 3.4E-10 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS06895 2e398adfb7eb47f963118ddf0209b77c 413 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 282 371 1.5E-19 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS06905 8aa9dddb81aaf886e4151745b4a53dc6 159 Gene3D G3DSA:3.40.50.300 3 151 2.7E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06905 8aa9dddb81aaf886e4151745b4a53dc6 159 SUPERFAMILY SSF52540 3 147 1.12E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06905 8aa9dddb81aaf886e4151745b4a53dc6 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 4.5E-29 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS06905 8aa9dddb81aaf886e4151745b4a53dc6 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 143 1.9E-53 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS06905 8aa9dddb81aaf886e4151745b4a53dc6 159 PIRSF PIRSF036409 1 148 6.0E-54 T 06-07-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 Gene3D G3DSA:2.40.50.100 48 78 7.9E-6 T 06-07-2017 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 Gene3D G3DSA:2.40.50.100 265 299 7.9E-6 T 06-07-2017 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 14 37 1.3E-7 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 56 76 1.3E-7 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 336 359 1.3E-7 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 281 302 1.3E-7 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS22035 00757f8d54e3cdb32216576b09cb4bc7 411 Pfam PF13437 HlyD family secretion protein 268 371 2.5E-11 T 06-07-2017 LFZ55_RS17735 bb4c35ffde6dd4e0f6d7340d4bc558c5 186 Pfam PF04224 Protein of unknown function, DUF417 3 180 1.2E-74 T 06-07-2017 IPR007339 Protein of unknown function DUF417 LFZ55_RS02480 4fe109246ad9f64ca4a530145ff6f3e7 374 Gene3D G3DSA:3.40.50.300 11 184 7.4E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02480 4fe109246ad9f64ca4a530145ff6f3e7 374 SUPERFAMILY SSF52540 70 208 1.02E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02480 4fe109246ad9f64ca4a530145ff6f3e7 374 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.618 T 06-07-2017 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 LFZ55_RS02480 4fe109246ad9f64ca4a530145ff6f3e7 374 Pfam PF03969 AFG1-like ATPase 5 371 6.7E-162 T 06-07-2017 IPR005654 ATPase, AFG1-like GO:0005524 LFZ55_RS10425 4e0bfc0085b33804503a29b4d16ffb6e 114 SUPERFAMILY SSF55298 6 114 2.2E-26 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LFZ55_RS10425 4e0bfc0085b33804503a29b4d16ffb6e 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 06-07-2017 IPR019897 RidA, conserved site LFZ55_RS10425 4e0bfc0085b33804503a29b4d16ffb6e 114 Gene3D G3DSA:3.30.1330.40 31 113 7.8E-20 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LFZ55_RS10425 4e0bfc0085b33804503a29b4d16ffb6e 114 Pfam PF01042 Endoribonuclease L-PSP 5 114 1.8E-26 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family LFZ55_RS11695 3b165552a6810d6f44f8607becbe7b89 149 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 107 5.8E-8 T 06-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 LFZ55_RS11695 3b165552a6810d6f44f8607becbe7b89 149 SUPERFAMILY SSF51316 4 123 1.57E-29 T 06-07-2017 IPR011057 Mss4-like LFZ55_RS11695 3b165552a6810d6f44f8607becbe7b89 149 Gene3D G3DSA:3.90.1590.10 2 105 9.2E-19 T 06-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 SUPERFAMILY SSF46785 12 76 2.94E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 Gene3D G3DSA:3.30.420.40 78 220 1.4E-30 T 06-07-2017 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 SUPERFAMILY SSF53067 81 365 2.27E-32 T 06-07-2017 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 Gene3D G3DSA:3.30.420.40 221 345 2.3E-13 T 06-07-2017 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 Pfam PF00480 ROK family 94 242 4.6E-18 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 56 2.7E-5 T 06-07-2017 LFZ55_RS21120 06434e3f2dcc0517fc869ed6c3f14a5a 370 Gene3D G3DSA:1.10.10.10 14 77 4.6E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 SMART SM00862 147 223 4.0E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 SMART SM00448 2 112 1.7E-39 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 SUPERFAMILY SSF52172 3 176 3.84E-39 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 Gene3D G3DSA:1.10.10.10 126 224 1.2E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 8.7E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 Gene3D G3DSA:3.40.50.2300 3 120 1.7E-36 T 06-07-2017 LFZ55_RS17090 4c266b4faece61d34976535a730f313f 225 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS12390 e40185f3d3074e2a39f9b465d5da3c82 966 Pfam PF14431 YwqJ-like deaminase 848 945 3.9E-12 T 06-07-2017 IPR025968 YwqJ-like deaminase LFZ55_RS12390 e40185f3d3074e2a39f9b465d5da3c82 966 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 236 265 0.0021 T 06-07-2017 IPR006530 YD repeat LFZ55_RS12390 e40185f3d3074e2a39f9b465d5da3c82 966 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 689 1.3E-24 T 06-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 LFZ55_RS14755 c81a13b4334b85bf85403cf4a9b554d1 129 Pfam PF00665 Integrase core domain 52 127 5.9E-9 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS14755 c81a13b4334b85bf85403cf4a9b554d1 129 SUPERFAMILY SSF53098 46 127 2.12E-14 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS14755 c81a13b4334b85bf85403cf4a9b554d1 129 Gene3D G3DSA:3.30.420.10 47 127 8.7E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS03630 12dc9af9f7e74a3f0d2852dc2859293b 499 PIRSF PIRSF006060 3 491 4.5E-71 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS03630 12dc9af9f7e74a3f0d2852dc2859293b 499 Pfam PF13520 Amino acid permease 15 432 1.9E-36 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 PIRSF PIRSF000193 2 269 1.4E-97 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 Gene3D G3DSA:1.10.3730.10 162 265 4.1E-42 T 06-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.954 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 3.0E-24 T 06-07-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 3.5E-38 T 06-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 2.6E-91 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 Gene3D G3DSA:3.40.50.720 1 159 1.2E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 SUPERFAMILY SSF51735 3 159 2.05E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS18505 bc0a0026a8155881a941217345836ee5 269 SUPERFAMILY SSF48179 162 268 4.42E-37 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS16710 f469e3fc36cd3bb8394679c185f1264c 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 48 3.5E-30 T 06-07-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 LFZ55_RS16710 f469e3fc36cd3bb8394679c185f1264c 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.506 T 06-07-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.9E-4 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 Pfam PF00107 Zinc-binding dehydrogenase 158 277 2.4E-15 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 Gene3D G3DSA:3.40.50.720 125 287 5.5E-77 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 SUPERFAMILY SSF51735 116 282 4.05E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 SMART SM00829 12 321 1.9E-5 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 SUPERFAMILY SSF50129 1 144 1.01E-45 T 06-07-2017 IPR011032 GroES-like LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 2.9E-140 T 06-07-2017 IPR014188 Acrylyl-CoA reductase AcuI LFZ55_RS02365 9f4d98fab200a583486d256808b6b109 324 Gene3D G3DSA:3.90.180.10 1 85 4.3E-6 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 Gene3D G3DSA:3.40.190.10 141 201 1.9E-8 T 06-07-2017 LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 SMART SM00062 30 253 1.3E-24 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 SUPERFAMILY SSF53850 5 252 5.96E-50 T 06-07-2017 LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 Gene3D G3DSA:3.40.190.10 11 140 2.6E-33 T 06-07-2017 LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 SMART SM00079 30 253 0.0041 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LFZ55_RS11745 ae17218d34bcb673b071bc1b057aa34e 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 252 8.6E-37 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.7E-131 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 Gene3D G3DSA:3.40.50.10490 21 192 9.6E-43 T 06-07-2017 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 PIRSF PIRSF004692 1 321 2.5E-122 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 Pfam PF01380 SIS domain 39 169 7.3E-31 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 SUPERFAMILY SSF53697 10 255 3.11E-53 T 06-07-2017 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 SUPERFAMILY SSF54631 259 317 1.77E-10 T 06-07-2017 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 Gene3D G3DSA:3.10.580.10 193 317 1.2E-31 T 06-07-2017 LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 Pfam PF00571 CBS domain 265 316 2.1E-5 T 06-07-2017 IPR000644 CBS domain LFZ55_RS05215 bbed48b2972af7ddb7f6aefdbb9f55f0 321 Pfam PF00571 CBS domain 210 256 0.0012 T 06-07-2017 IPR000644 CBS domain LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 SUPERFAMILY SSF69917 28 315 7.32E-113 T 06-07-2017 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 Pfam PF01278 Omptin family 29 315 9.9E-121 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 212 233 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 259 279 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 82 107 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 56 81 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 238 258 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 143 170 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 115 142 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 190 211 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PRINTS PR00482 Omptin serine protease signature 36 50 6.0E-114 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 Gene3D G3DSA:2.40.128.90 26 315 3.2E-124 T 06-07-2017 IPR023619 Peptidase A26 GO:0004190 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 06-07-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 PIRSF PIRSF001522 1 315 9.3E-138 T 06-07-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 LFZ55_RS14060 49d00ad4c514965a8023295182deca2e 315 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 06-07-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 LFZ55_RS10040 2fe5421515104a6ba053e8e62e2dfd30 219 Gene3D G3DSA:1.10.3680.10 66 212 3.2E-14 T 06-07-2017 IPR029024 TerB-like LFZ55_RS10040 2fe5421515104a6ba053e8e62e2dfd30 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 5.2E-49 T 06-07-2017 IPR007486 Inner membrane protein YebE LFZ55_RS10040 2fe5421515104a6ba053e8e62e2dfd30 219 SUPERFAMILY SSF158682 88 213 2.62E-18 T 06-07-2017 IPR029024 TerB-like LFZ55_RS19605 1fbc4633062071b11ac919e6fcdd8012 457 Pfam PF00324 Amino acid permease 19 452 2.4E-124 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS19605 1fbc4633062071b11ac919e6fcdd8012 457 PIRSF PIRSF006060 1 455 1.0E-77 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS19605 1fbc4633062071b11ac919e6fcdd8012 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 06-07-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 Gene3D G3DSA:3.40.1180.10 18 246 2.2E-97 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 3.2E-80 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 SUPERFAMILY SSF64005 18 239 8.24E-87 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.734 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LFZ55_RS19285 7fea85b5e65284ace6fe48b4c9f77967 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 5.1E-104 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LFZ55_RS22355 53e9170622b6b2f89616af46fd23af53 533 SMART SM00052 267 511 1.4E-107 T 06-07-2017 IPR001633 EAL domain LFZ55_RS22355 53e9170622b6b2f89616af46fd23af53 533 Pfam PF12792 CSS motif domain associated with EAL 39 242 2.8E-41 T 06-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LFZ55_RS22355 53e9170622b6b2f89616af46fd23af53 533 Pfam PF00563 EAL domain 274 505 1.4E-63 T 06-07-2017 IPR001633 EAL domain LFZ55_RS22355 53e9170622b6b2f89616af46fd23af53 533 Gene3D G3DSA:3.20.20.450 274 518 1.8E-80 T 06-07-2017 IPR001633 EAL domain LFZ55_RS22355 53e9170622b6b2f89616af46fd23af53 533 SUPERFAMILY SSF141868 274 519 4.58E-76 T 06-07-2017 IPR001633 EAL domain LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 Pfam PF00106 short chain dehydrogenase 8 205 1.0E-34 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 Gene3D G3DSA:3.40.50.720 2 248 4.8E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.5E-16 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.5E-16 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-16 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.5E-16 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.5E-16 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS14800 d66f7826e38e618298ff454b3164829d 259 SUPERFAMILY SSF51735 1 243 1.11E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23670 ced7c34b9d4a4e8820e8d0efb279195c 283 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 10 280 2.0E-98 T 06-07-2017 IPR017483 Conserved hypothetical protein CHP03034 LFZ55_RS23670 ced7c34b9d4a4e8820e8d0efb279195c 283 Pfam PF11692 Protein of unknown function (DUF3289) 11 280 5.5E-81 T 06-07-2017 IPR017483 Conserved hypothetical protein CHP03034 LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 Gene3D G3DSA:3.40.810.20 206 435 8.0E-42 T 06-07-2017 LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 284 433 1.7E-57 T 06-07-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 Gene3D G3DSA:3.40.1080.10 8 195 1.8E-54 T 06-07-2017 LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 SUPERFAMILY SSF100950 200 439 2.09E-58 T 06-07-2017 LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 SUPERFAMILY SSF100950 5 233 1.93E-35 T 06-07-2017 LFZ55_RS03670 5bbb3712bf39552401a2a767b21fda40 441 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 196 1.7E-15 T 06-07-2017 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 SUPERFAMILY SSF47240 7 57 3.04E-73 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 SUPERFAMILY SSF47240 105 252 3.04E-73 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 Gene3D G3DSA:1.20.1260.10 105 252 1.3E-87 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 Gene3D G3DSA:1.20.1260.10 5 57 1.3E-87 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 PIRSF PIRSF020736 1 253 1.8E-91 T 06-07-2017 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 LFZ55_RS21240 5dcb0844f7402a8daebec6561ec4d076 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 3.1E-123 T 06-07-2017 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 LFZ55_RS07180 b41073a9fedad43884690dc8e2e6e385 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 6.5E-23 T 06-07-2017 IPR019638 Protein of unknown function DUF2502 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 SUPERFAMILY SSF53649 285 484 3.63E-84 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 SUPERFAMILY SSF53649 65 257 3.63E-84 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 SUPERFAMILY SSF53649 524 597 3.63E-84 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 Gene3D G3DSA:3.40.720.10 67 464 3.3E-65 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 Gene3D G3DSA:3.30.1120.10 513 597 2.8E-13 T 06-07-2017 LFZ55_RS20035 b55a7cfe53e98a9de9146e7a1a89dbe8 629 Pfam PF00884 Sulfatase 67 439 8.4E-39 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS03265 cac582fc17e9b827cf50ba908a576e6b 69 Hamap MF_00525 Surface composition regulator [glgS]. 3 62 21.773 T 06-07-2017 IPR015065 Surface composition regulator LFZ55_RS03265 cac582fc17e9b827cf50ba908a576e6b 69 Pfam PF08971 Glycogen synthesis protein 3 69 8.0E-41 T 06-07-2017 IPR015065 Surface composition regulator LFZ55_RS03265 cac582fc17e9b827cf50ba908a576e6b 69 Gene3D G3DSA:1.20.970.20 4 69 2.0E-39 T 06-07-2017 IPR015065 Surface composition regulator LFZ55_RS03265 cac582fc17e9b827cf50ba908a576e6b 69 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 14 69 3.0E-28 T 06-07-2017 IPR015065 Surface composition regulator LFZ55_RS03265 cac582fc17e9b827cf50ba908a576e6b 69 SUPERFAMILY SSF109747 4 69 2.48E-42 T 06-07-2017 IPR015065 Surface composition regulator LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 13 241 57.922 T 06-07-2017 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 Gene3D G3DSA:3.40.50.300 9 172 2.0E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 51 71 1.7E-7 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 139 166 1.7E-7 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 Pfam PF00308 Bacterial dnaA protein 24 220 2.9E-16 T 06-07-2017 IPR013317 Chromosomal replication initiator protein DnaA LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 Gene3D G3DSA:1.10.8.60 175 240 5.9E-31 T 06-07-2017 LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 14 240 2.3E-84 T 06-07-2017 IPR017788 DnaA regulatory inactivator Hda GO:0032297 LFZ55_RS06745 a75909f8e963c88a3e1518da625cf880 241 SUPERFAMILY SSF52540 25 219 1.09E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 Gene3D G3DSA:3.40.50.720 189 290 1.2E-14 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 SUPERFAMILY SSF50129 7 162 2.74E-43 T 06-07-2017 IPR011032 GroES-like LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 2.0E-25 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 SUPERFAMILY SSF51735 142 305 7.62E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 9.2E-22 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 Gene3D G3DSA:3.90.180.10 4 188 2.0E-58 T 06-07-2017 IPR011032 GroES-like LFZ55_RS21165 82047dce793845bb9ff38c473df3f3f7 339 SMART SM00829 13 335 3.1E-6 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 Gene3D G3DSA:3.40.1670.10 326 440 1.7E-33 T 06-07-2017 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 SUPERFAMILY SSF143968 312 467 7.85E-41 T 06-07-2017 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 2.1E-125 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 70.934 T 06-07-2017 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 KEGG: 00627+4.1.1.61 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 SUPERFAMILY SSF50475 3 309 6.28E-82 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS04840 b0a70abb61799343f685a7bd296de4bf 475 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 416 2.2E-104 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 LFZ55_RS01345 4e62f92aefa493be2355bd13cf28c984 192 SUPERFAMILY SSF56214 29 79 2.04E-9 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS01345 4e62f92aefa493be2355bd13cf28c984 192 Gene3D G3DSA:3.90.470.20 100 145 6.5E-15 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS01345 4e62f92aefa493be2355bd13cf28c984 192 SUPERFAMILY SSF56214 87 180 7.72E-15 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS01345 4e62f92aefa493be2355bd13cf28c984 192 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 154 1.4E-9 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS01345 4e62f92aefa493be2355bd13cf28c984 192 Gene3D G3DSA:3.90.470.20 36 99 4.5E-14 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 1.2E-159 T 06-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 Gene3D G3DSA:3.40.50.620 2 211 1.9E-97 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 SUPERFAMILY SSF52402 4 295 2.43E-57 T 06-07-2017 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 Gene3D G3DSA:2.40.30.10 282 363 3.6E-33 T 06-07-2017 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 Pfam PF03054 tRNA methyl transferase 6 360 1.1E-143 T 06-07-2017 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 40.751 T 06-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 LFZ55_RS14100 b4c2c7fad140641341923b2adb8e66e3 368 Gene3D G3DSA:2.30.30.280 213 280 6.6E-35 T 06-07-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 LFZ55_RS19480 d6fc1c5da53e92fc07f48a03f2ef07d0 409 Gene3D G3DSA:3.20.20.370 202 373 5.6E-22 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS19480 d6fc1c5da53e92fc07f48a03f2ef07d0 409 SUPERFAMILY SSF88713 191 380 9.73E-31 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS19480 d6fc1c5da53e92fc07f48a03f2ef07d0 409 Pfam PF01522 Polysaccharide deacetylase 228 367 2.1E-21 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 SUPERFAMILY SSF81271 279 359 4.58E-36 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Gene3D G3DSA:3.40.50.300 4 130 2.1E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Gene3D G3DSA:3.40.50.300 201 266 2.1E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.8E-176 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Gene3D G3DSA:1.10.150.300 131 200 4.5E-28 T 06-07-2017 IPR023192 TGS-like domain LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.7E-21 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 SUPERFAMILY SSF52540 3 301 1.18E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Gene3D G3DSA:3.10.20.30 267 363 7.8E-50 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 PIRSF PIRSF006641 1 363 5.0E-158 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.0E-39 T 06-07-2017 IPR013029 Domain of unknown function DUF933 LFZ55_RS10835 a24dde8d11233199a15e74346a5611fc 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.705 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 PIRSF PIRSF004640 1 363 1.6E-147 T 06-07-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 SUPERFAMILY SSF51717 15 208 1.33E-9 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 1.2E-124 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 SUPERFAMILY SSF56014 266 332 1.72E-9 T 06-07-2017 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 Pfam PF04551 GcpE protein 14 353 1.2E-130 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 Gene3D G3DSA:3.20.20.70 27 132 7.9E-10 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06270 e4a827c89fe4a317aff5f2d3211bfb00 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.486 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS16995 f5b967bd5bb3570b607e897d2495c7e1 297 SUPERFAMILY SSF53448 1 281 1.0E-28 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS16995 f5b967bd5bb3570b607e897d2495c7e1 297 Pfam PF00535 Glycosyl transferase family 2 5 175 8.4E-13 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS16995 f5b967bd5bb3570b607e897d2495c7e1 297 Gene3D G3DSA:3.90.550.10 4 220 2.0E-19 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS10355 4394711071008e0ffef12f0aaf98ac6a 269 PIRSF PIRSF018249 1 268 6.8E-89 T 06-07-2017 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 LFZ55_RS10355 4394711071008e0ffef12f0aaf98ac6a 269 SUPERFAMILY SSF53335 4 261 5.02E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10355 4394711071008e0ffef12f0aaf98ac6a 269 Pfam PF13847 Methyltransferase domain 84 199 8.7E-16 T 06-07-2017 IPR025714 Methyltransferase domain LFZ55_RS10355 4394711071008e0ffef12f0aaf98ac6a 269 Gene3D G3DSA:3.40.50.150 67 201 1.1E-24 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10355 4394711071008e0ffef12f0aaf98ac6a 269 Gene3D G3DSA:3.40.50.150 234 258 1.1E-24 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS11115 a410478e7fb236f7b5df3784baff86cb 292 Gene3D G3DSA:1.20.1260.10 1 199 3.8E-77 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS11115 a410478e7fb236f7b5df3784baff86cb 292 Pfam PF05067 Manganese containing catalase 1 289 4.7E-91 T 06-07-2017 IPR007760 Manganese catalase LFZ55_RS11115 a410478e7fb236f7b5df3784baff86cb 292 SUPERFAMILY SSF47240 1 285 1.59E-86 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS11630 fe82866025b8b8f9dda663f289d880ae 1139 Pfam PF15962 Domain of unknown function (DUF4765) 13 1138 0.0 T 06-07-2017 IPR031886 Domain of unknown function DUF4765 LFZ55_RS21600 51ff38378b2739ef120d66312c8da0be 91 SUPERFAMILY SSF159871 2 91 6.8E-20 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21600 51ff38378b2739ef120d66312c8da0be 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 1.0E-15 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21600 51ff38378b2739ef120d66312c8da0be 91 Gene3D G3DSA:3.30.1660.10 24 91 1.5E-19 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS24945 f5a482a62781934b5cf963546f2e10fe 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 3.4E-67 T 06-07-2017 IPR007973 Pilus assembly TraE GO:0000746 LFZ55_RS24945 f5a482a62781934b5cf963546f2e10fe 188 Pfam PF05309 TraE protein 1 182 4.3E-59 T 06-07-2017 IPR007973 Pilus assembly TraE GO:0000746 LFZ55_RS16435 af2548967dc6f269049e3a4fc8d7c96b 306 Gene3D G3DSA:2.40.440.10 93 233 4.9E-33 T 06-07-2017 LFZ55_RS16435 af2548967dc6f269049e3a4fc8d7c96b 306 SUPERFAMILY SSF141523 177 233 3.53E-26 T 06-07-2017 LFZ55_RS16435 af2548967dc6f269049e3a4fc8d7c96b 306 SUPERFAMILY SSF141523 99 149 3.53E-26 T 06-07-2017 LFZ55_RS16435 af2548967dc6f269049e3a4fc8d7c96b 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 1.0E-16 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS17995 8b99581434bebc7c2effed630a7e4114 323 Gene3D G3DSA:3.40.50.1820 10 318 4.4E-68 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17995 8b99581434bebc7c2effed630a7e4114 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 06-07-2017 IPR033140 Lipase, GDXG, putative serine active site LFZ55_RS17995 8b99581434bebc7c2effed630a7e4114 323 Hamap MF_01958 Acetyl esterase [aes]. 1 319 69.517 T 06-07-2017 IPR023508 Acetyl esterase GO:0005737|GO:0052689 LFZ55_RS17995 8b99581434bebc7c2effed630a7e4114 323 SUPERFAMILY SSF53474 29 315 3.59E-54 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17995 8b99581434bebc7c2effed630a7e4114 323 Pfam PF07859 alpha/beta hydrolase fold 88 295 3.1E-51 T 06-07-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 182 197 - T 06-07-2017 IPR019826 Carboxylesterase type B, active site LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 Pfam PF00135 Carboxylesterase family 7 474 1.0E-100 T 06-07-2017 IPR002018 Carboxylesterase, type B LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 SUPERFAMILY SSF53474 7 497 1.09E-113 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 Gene3D G3DSA:3.40.50.1820 6 498 6.0E-131 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 06-07-2017 IPR019819 Carboxylesterase type B, conserved site LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 PRINTS PR00878 Cholinesterase signature 400 412 5.1E-6 T 06-07-2017 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 LFZ55_RS11855 288990908b0d3fe9746609d6aa1aacdd 502 PRINTS PR00878 Cholinesterase signature 108 137 5.1E-6 T 06-07-2017 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 LFZ55_RS04915 4e531f2154423599bf880dcd05f2995d 216 Pfam PF12833 Helix-turn-helix domain 135 206 3.4E-10 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04915 4e531f2154423599bf880dcd05f2995d 216 Gene3D G3DSA:1.10.10.60 164 206 2.9E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04915 4e531f2154423599bf880dcd05f2995d 216 SUPERFAMILY SSF46689 162 207 2.6E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS04915 4e531f2154423599bf880dcd05f2995d 216 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 162 204 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS04915 4e531f2154423599bf880dcd05f2995d 216 SMART SM00342 125 208 3.8E-15 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05715 0a504fc76b0c7789d333de2a4dedf29f 469 Gene3D G3DSA:1.20.1600.10 55 451 5.4E-61 T 06-07-2017 LFZ55_RS05715 0a504fc76b0c7789d333de2a4dedf29f 469 Pfam PF02321 Outer membrane efflux protein 62 243 1.8E-27 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS05715 0a504fc76b0c7789d333de2a4dedf29f 469 Pfam PF02321 Outer membrane efflux protein 273 446 7.8E-22 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS05715 0a504fc76b0c7789d333de2a4dedf29f 469 SUPERFAMILY SSF56954 8 451 1.11E-67 T 06-07-2017 LFZ55_RS05715 0a504fc76b0c7789d333de2a4dedf29f 469 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 59 464 1.5E-128 T 06-07-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Gene3D G3DSA:2.40.30.110 279 361 2.6E-30 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 9.2E-82 T 06-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Gene3D G3DSA:3.30.1360.120 130 231 8.5E-28 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 SUPERFAMILY SSF101790 271 361 1.8E-26 T 06-07-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 2.9E-18 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 PIRSF PIRSF006487 1 363 1.7E-78 T 06-07-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.35 T 06-07-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 1.7E-164 T 06-07-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 Gene3D G3DSA:3.30.70.1400 51 129 5.4E-30 T 06-07-2017 LFZ55_RS04090 f6d744593e8458cea7b237d3d06090d4 364 SUPERFAMILY SSF103025 3 277 8.32E-89 T 06-07-2017 LFZ55_RS05100 9efdb5510d32ae4a6d8eb062d6c0e517 273 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS05100 9efdb5510d32ae4a6d8eb062d6c0e517 273 SUPERFAMILY SSF52540 4 231 3.18E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05100 9efdb5510d32ae4a6d8eb062d6c0e517 273 Pfam PF00005 ABC transporter 22 169 1.9E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS05100 9efdb5510d32ae4a6d8eb062d6c0e517 273 SMART SM00382 31 247 6.1E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS05100 9efdb5510d32ae4a6d8eb062d6c0e517 273 Gene3D G3DSA:3.40.50.300 2 234 4.5E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 49 189 5.1E-27 T 06-07-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 Pfam PF08535 KorB domain 153 239 2.4E-14 T 06-07-2017 IPR013741 Transcriptional repressor protein KorB LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 SUPERFAMILY SSF110849 33 101 1.73E-6 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 SUPERFAMILY SSF109709 123 237 4.45E-19 T 06-07-2017 LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 Pfam PF02195 ParB-like nuclease domain 47 101 4.5E-9 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS24205 a26aba8e2e76ba9f3598a68c017116ff 466 Gene3D G3DSA:3.90.1530.10 34 136 2.0E-6 T 06-07-2017 LFZ55_RS06460 8208477648f106a8228ab8b444b48f1c 556 Pfam PF12236 Bacteriophage head to tail connecting protein 15 499 4.0E-172 T 06-07-2017 IPR020991 Head-to-tail joining protein, podovirus-type LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 2.4E-22 T 06-07-2017 IPR015041 Osmosensory transporter coiled coil LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 Gene3D G3DSA:1.20.1250.20 252 444 9.3E-28 T 06-07-2017 LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 Gene3D G3DSA:1.20.1250.20 24 232 1.5E-23 T 06-07-2017 LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 Pfam PF00083 Sugar (and other) transporter 28 448 1.7E-72 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 SUPERFAMILY SSF103473 24 443 5.1E-69 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 SUPERFAMILY SSF103661 465 497 1.83E-12 T 06-07-2017 LFZ55_RS22150 0ff9104a60c5097dcfe34a2e954b5d5b 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 9.8E-147 T 06-07-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LFZ55_RS20205 6323d371f0afa36a60ae03f540fa78a0 873 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 322 332 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS20205 6323d371f0afa36a60ae03f540fa78a0 873 SUPERFAMILY SSF141729 60 181 1.27E-33 T 06-07-2017 LFZ55_RS20205 6323d371f0afa36a60ae03f540fa78a0 873 Pfam PF13953 PapC C-terminal domain 796 859 1.0E-21 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS20205 6323d371f0afa36a60ae03f540fa78a0 873 Pfam PF00577 Outer membrane usher protein 208 787 2.2E-202 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS20205 6323d371f0afa36a60ae03f540fa78a0 873 Pfam PF13954 PapC N-terminal domain 38 189 2.3E-48 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.708 T 06-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.0E-8 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 300 2.9E-6 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 SUPERFAMILY SSF53448 6 252 1.42E-65 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 1.4E-204 T 06-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Gene3D G3DSA:3.90.550.10 3 243 2.9E-70 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 SUPERFAMILY SSF51161 255 439 1.22E-52 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Gene3D G3DSA:2.160.10.10 244 324 2.3E-19 T 06-07-2017 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Gene3D G3DSA:2.160.10.10 325 455 6.0E-35 T 06-07-2017 LFZ55_RS24100 7b82c31b041bf905edea19d178538add 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 7.0E-20 T 06-07-2017 IPR025877 MobA-like NTP transferase LFZ55_RS24020 0e4cb54c0450f94df142df8c377b22ff 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 3.6E-25 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LFZ55_RS24020 0e4cb54c0450f94df142df8c377b22ff 498 Pfam PF12592 Protein of unknown function (DUF3763) 443 497 2.1E-20 T 06-07-2017 IPR022547 ATPase, RavA, C-terminal GO:0016820 LFZ55_RS24020 0e4cb54c0450f94df142df8c377b22ff 498 SUPERFAMILY SSF52540 22 286 1.56E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24020 0e4cb54c0450f94df142df8c377b22ff 498 Gene3D G3DSA:3.40.50.300 25 183 2.1E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24020 0e4cb54c0450f94df142df8c377b22ff 498 SMART SM00382 38 187 3.5E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS14530 3c4b46f52c2e735936d02c01dd207cea 384 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 384 46.669 T 06-07-2017 IPR023723 Glucan biosynthesis protein C GO:0016741 LFZ55_RS14530 3c4b46f52c2e735936d02c01dd207cea 384 Pfam PF01757 Acyltransferase family 10 356 2.4E-35 T 06-07-2017 IPR002656 Acyltransferase 3 GO:0016747 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 Gene3D G3DSA:1.10.10.60 245 294 9.5E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 1.9E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 1.9E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 SUPERFAMILY SSF46689 245 294 4.44E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 Gene3D G3DSA:1.10.10.60 187 244 4.2E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 SMART SM00342 208 291 2.6E-35 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 SUPERFAMILY SSF46689 191 242 7.62E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 Pfam PF12833 Helix-turn-helix domain 215 293 3.7E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS09065 cb6c270fd0ece6e8f236747c8e44c3a2 303 Pfam PF10114 Sensory domain found in PocR 7 164 1.1E-44 T 06-07-2017 IPR018771 PocR domain LFZ55_RS24455 0af1b0a4f503fcca7fed5069e915a232 243 PIRSF PIRSF004576 4 237 4.9E-74 T 06-07-2017 IPR016423 Resolvase, Rsv LFZ55_RS24455 0af1b0a4f503fcca7fed5069e915a232 243 Pfam PF00589 Phage integrase family 35 212 4.2E-27 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS24455 0af1b0a4f503fcca7fed5069e915a232 243 SUPERFAMILY SSF56349 35 212 1.77E-25 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS24455 0af1b0a4f503fcca7fed5069e915a232 243 Gene3D G3DSA:1.10.443.10 33 213 3.3E-25 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS03715 fbe7ccdd7f4fc62bf21a02beb0c5c6f7 73 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 71 3.7E-33 T 06-07-2017 LFZ55_RS03715 fbe7ccdd7f4fc62bf21a02beb0c5c6f7 73 Gene3D G3DSA:1.10.260.40 2 70 2.9E-37 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS03715 fbe7ccdd7f4fc62bf21a02beb0c5c6f7 73 SUPERFAMILY SSF47413 3 70 6.75E-28 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS00645 6e88d2bbffd24ae5c087978ef83a1bcf 359 Gene3D G3DSA:3.40.50.2000 176 323 4.7E-17 T 06-07-2017 LFZ55_RS00645 6e88d2bbffd24ae5c087978ef83a1bcf 359 SUPERFAMILY SSF53756 2 326 5.89E-50 T 06-07-2017 LFZ55_RS00645 6e88d2bbffd24ae5c087978ef83a1bcf 359 Pfam PF00534 Glycosyl transferases group 1 174 333 6.5E-29 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS00645 6e88d2bbffd24ae5c087978ef83a1bcf 359 Pfam PF13439 Glycosyltransferase Family 4 14 166 1.1E-6 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS19365 faaa6bcf17ccfd009911a67c95bd6b99 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.644 T 06-07-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS19365 faaa6bcf17ccfd009911a67c95bd6b99 232 Gene3D G3DSA:3.40.50.1580 1 229 2.5E-76 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS19365 faaa6bcf17ccfd009911a67c95bd6b99 232 Pfam PF01048 Phosphorylase superfamily 2 226 3.4E-47 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS19365 faaa6bcf17ccfd009911a67c95bd6b99 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 1.3E-133 T 06-07-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LFZ55_RS19365 faaa6bcf17ccfd009911a67c95bd6b99 232 SUPERFAMILY SSF53167 1 229 4.19E-74 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LFZ55_RS20655 55270a5f5e1a26446e446fd776021f2a 423 Pfam PF04286 Protein of unknown function (DUF445) 44 417 7.3E-108 T 06-07-2017 IPR007383 Protein of unknown function DUF445 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.315 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 Pfam PF00117 Glutamine amidotransferase class-I 38 194 4.5E-18 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 06-07-2017 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 06-07-2017 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 4.1E-73 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 PIRSF PIRSF000495 1 196 6.0E-63 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 Gene3D G3DSA:3.40.50.880 1 196 1.8E-69 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS08870 4531c40d89bbfcec961dabae77ad0403 196 SUPERFAMILY SSF52317 3 195 4.89E-52 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS07205 2133dbe87d3fe503ab2d3b625bd6cc9c 108 Gene3D G3DSA:3.40.50.2300 2 101 1.9E-36 T 06-07-2017 LFZ55_RS07205 2133dbe87d3fe503ab2d3b625bd6cc9c 108 SUPERFAMILY SSF52794 4 100 2.79E-30 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS07205 2133dbe87d3fe503ab2d3b625bd6cc9c 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 4.2E-17 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS07205 2133dbe87d3fe503ab2d3b625bd6cc9c 108 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 90 5.2E-28 T 06-07-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.1E-30 T 06-07-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:1.10.3650.10 359 434 1.1E-32 T 06-07-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:3.30.70.20 5 56 1.5E-10 T 06-07-2017 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 0.0 T 06-07-2017 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:3.30.70.20 159 195 2.1E-12 T 06-07-2017 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:3.30.70.20 196 235 2.6E-25 T 06-07-2017 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 9.7E-38 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:3.30.70.20 236 358 5.8E-77 T 06-07-2017 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 Gene3D G3DSA:3.30.70.20 436 465 5.8E-77 T 06-07-2017 LFZ55_RS10945 77bd2820cb1bf9e109e53d957dde3639 511 SUPERFAMILY SSF54862 1 503 4.71E-184 T 06-07-2017 LFZ55_RS07545 a72735769cec3ed6580dbc4c5ab3c59a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 5.7E-34 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS07545 a72735769cec3ed6580dbc4c5ab3c59a 147 SUPERFAMILY SSF55804 2 145 1.57E-35 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS07545 a72735769cec3ed6580dbc4c5ab3c59a 147 Gene3D G3DSA:3.40.930.10 2 146 1.6E-48 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 06-07-2017 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 5.9E-63 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 Pfam PF00474 Sodium:solute symporter family 63 468 2.9E-137 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS22305 9a24305ddf79b1c1c704e3a45ad82a6a 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 59.388 T 06-07-2017 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 LFZ55_RS23290 9f380c749b59136edab0eeeef8b2befb 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 1.2E-21 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS23290 9f380c749b59136edab0eeeef8b2befb 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 5.9E-66 T 06-07-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 LFZ55_RS23290 9f380c749b59136edab0eeeef8b2befb 211 SUPERFAMILY SSF81342 4 205 9.99E-55 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS23290 9f380c749b59136edab0eeeef8b2befb 211 Gene3D G3DSA:1.20.950.20 1 210 3.9E-71 T 06-07-2017 LFZ55_RS06900 0520d7af84ff1f2e809f8447def15aa6 111 SMART SM00877 39 111 4.3E-13 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06900 0520d7af84ff1f2e809f8447def15aa6 111 SUPERFAMILY SSF143414 39 106 2.22E-12 T 06-07-2017 LFZ55_RS06900 0520d7af84ff1f2e809f8447def15aa6 111 PIRSF PIRSF012296 1 111 2.0E-56 T 06-07-2017 IPR009307 Ethanolamine utilisation EutS GO:0006580 LFZ55_RS06900 0520d7af84ff1f2e809f8447def15aa6 111 Pfam PF00936 BMC domain 40 103 1.6E-11 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 SUPERFAMILY SSF47384 229 308 5.89E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 SMART SM00387 358 469 4.6E-23 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 Pfam PF00672 HAMP domain 175 241 1.7E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 SMART SM00304 193 245 2.7E-5 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 Gene3D G3DSA:1.10.287.130 238 306 2.8E-6 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 Gene3D G3DSA:3.30.565.10 317 450 2.6E-27 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 Pfam PF08521 Two-component sensor kinase N-terminal 21 169 3.5E-39 T 06-07-2017 IPR013727 Two-component sensor kinase, N-terminal LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 SMART SM00388 246 311 1.1E-7 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 SUPERFAMILY SSF55874 317 461 1.57E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS05505 907399250b371eab73912f7a70fc9f8f 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 458 1.5E-13 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS07005 4c22d6948f86aff740d99d258ef98a7d 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 1.3E-80 T 06-07-2017 IPR010938 Protein of unknown function DUF1131 LFZ55_RS07005 4c22d6948f86aff740d99d258ef98a7d 191 Gene3D G3DSA:2.60.460.10 26 191 1.4E-81 T 06-07-2017 LFZ55_RS07005 4c22d6948f86aff740d99d258ef98a7d 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 17 191 3.0E-94 T 06-07-2017 IPR010938 Protein of unknown function DUF1131 LFZ55_RS07200 3fffa8489e9ebcae619043e10eea63ad 321 Pfam PF02685 Glucokinase 6 315 6.5E-122 T 06-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LFZ55_RS07200 3fffa8489e9ebcae619043e10eea63ad 321 SUPERFAMILY SSF53067 4 318 9.15E-61 T 06-07-2017 LFZ55_RS07200 3fffa8489e9ebcae619043e10eea63ad 321 Hamap MF_00524 Glucokinase [glk]. 2 316 40.36 T 06-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LFZ55_RS07200 3fffa8489e9ebcae619043e10eea63ad 321 Gene3D G3DSA:3.40.367.20 100 299 4.7E-78 T 06-07-2017 LFZ55_RS07200 3fffa8489e9ebcae619043e10eea63ad 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 1.3E-149 T 06-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LFZ55_RS04995 18eb6549a5bedfe7f22f3027dca9fbda 343 SUPERFAMILY SSF140693 49 332 3.53E-86 T 06-07-2017 LFZ55_RS04995 18eb6549a5bedfe7f22f3027dca9fbda 343 Pfam PF06511 Invasion plasmid antigen IpaD 5 341 4.8E-159 T 06-07-2017 IPR009483 Invasion plasmid antigen IpaD GO:0009405 LFZ55_RS04995 18eb6549a5bedfe7f22f3027dca9fbda 343 TIGRFAM TIGR02553 SipD_IpaD_SspD: type III effector protein IpaD/SipD/SspD 25 343 6.2E-159 T 06-07-2017 IPR013386 Type III effector protein IpaD/SipD/SspD GO:0009405 LFZ55_RS13170 9f2708e3bb2761a5fee583a7fbf1c24c 224 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 29 206 3.9E-39 T 06-07-2017 IPR012842 Type III secretion system HrpE/YscL LFZ55_RS07395 3b0abf20195aa8f609aff392af9632a8 392 SUPERFAMILY SSF103473 14 391 1.83E-51 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS07395 3b0abf20195aa8f609aff392af9632a8 392 Hamap MF_01118 UPF0226 membrane protein . 1 392 29.496 T 06-07-2017 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily LFZ55_RS07395 3b0abf20195aa8f609aff392af9632a8 392 Gene3D G3DSA:1.20.1250.20 17 199 2.9E-18 T 06-07-2017 LFZ55_RS07395 3b0abf20195aa8f609aff392af9632a8 392 Gene3D G3DSA:1.20.1250.20 221 388 1.0E-20 T 06-07-2017 LFZ55_RS07395 3b0abf20195aa8f609aff392af9632a8 392 Pfam PF07690 Major Facilitator Superfamily 20 253 2.9E-16 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS13820 af4973fbb3a0436b0cec6d060220ace4 394 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 6.8E-139 T 06-07-2017 IPR004747 Cyanate transport system protein GO:0016021 LFZ55_RS13820 af4973fbb3a0436b0cec6d060220ace4 394 SUPERFAMILY SSF103473 8 389 7.98E-47 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS13820 af4973fbb3a0436b0cec6d060220ace4 394 Pfam PF07690 Major Facilitator Superfamily 23 349 2.7E-22 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS13820 af4973fbb3a0436b0cec6d060220ace4 394 Gene3D G3DSA:1.20.1250.20 16 192 5.0E-17 T 06-07-2017 LFZ55_RS13820 af4973fbb3a0436b0cec6d060220ace4 394 Gene3D G3DSA:1.20.1250.20 205 389 1.4E-14 T 06-07-2017 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 371 1.0E-87 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 SUPERFAMILY SSF51556 51 346 1.36E-90 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 SUPERFAMILY SSF51338 346 374 1.78E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 SUPERFAMILY SSF51338 2 49 1.78E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 Gene3D G3DSA:3.20.20.140 51 345 1.0E-100 T 06-07-2017 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 PIRSF PIRSF038994 1 375 3.6E-112 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LFZ55_RS02910 a291ffc90af931d4f9c8152f357dd97b 377 Pfam PF01979 Amidohydrolase family 47 361 2.0E-16 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 LFZ55_RS13900 25c0d50803793f15d276942959cc32b5 282 Pfam PF13411 MerR HTH family regulatory protein 4 69 3.5E-14 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13900 25c0d50803793f15d276942959cc32b5 282 SUPERFAMILY SSF46955 4 94 2.64E-17 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS13900 25c0d50803793f15d276942959cc32b5 282 Gene3D G3DSA:1.10.1660.10 3 69 1.8E-16 T 06-07-2017 LFZ55_RS13900 25c0d50803793f15d276942959cc32b5 282 SMART SM00422 4 72 4.5E-17 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13900 25c0d50803793f15d276942959cc32b5 282 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 SUPERFAMILY SSF46785 2 43 2.93E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 SUPERFAMILY SSF55804 454 581 6.02E-15 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 458 562 9.9E-12 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 Pfam PF08279 HTH domain 5 60 2.8E-8 T 06-07-2017 IPR013196 Helix-turn-helix, type 11 LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 Gene3D G3DSA:1.10.10.10 1 61 8.3E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23255 85c6e13d4399f5d4b54d5a11e219724d 581 Gene3D G3DSA:3.40.930.10 455 580 4.5E-11 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Pfam PF08442 ATP-grasp domain 2 203 1.5E-82 T 06-07-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.319 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Gene3D G3DSA:3.40.50.261 240 383 2.0E-65 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Gene3D G3DSA:3.30.1490.20 22 95 2.0E-35 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Pfam PF00549 CoA-ligase 262 382 4.6E-25 T 06-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 7.2E-184 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 PIRSF PIRSF001554 1 388 2.9E-154 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 SUPERFAMILY SSF56059 1 238 3.18E-81 T 06-07-2017 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 Gene3D G3DSA:3.30.470.20 96 239 1.7E-56 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 SUPERFAMILY SSF52210 239 385 1.44E-53 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS16900 bd684594cafb2e6ac5c0e579eab630f5 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 06-07-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 LFZ55_RS10625 105f0f17fe4d9841d16d1948941e01bb 237 SUPERFAMILY SSF56935 56 237 8.85E-8 T 06-07-2017 LFZ55_RS10625 105f0f17fe4d9841d16d1948941e01bb 237 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 26 236 5.0E-36 T 06-07-2017 IPR009331 Oligogalacturonate-specific porin LFZ55_RS10625 105f0f17fe4d9841d16d1948941e01bb 237 Gene3D G3DSA:2.40.230.30 28 237 4.2E-57 T 06-07-2017 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 Gene3D G3DSA:2.30.42.10 207 295 1.6E-19 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 2.5E-172 T 06-07-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 276 3.9E-9 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 Gene3D G3DSA:2.30.42.10 96 184 4.5E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 SUPERFAMILY SSF50156 195 290 2.63E-18 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 Pfam PF02163 Peptidase family M50 10 438 1.5E-87 T 06-07-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 SMART SM00228 115 186 0.044 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 SMART SM00228 211 280 7.3E-12 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS19275 b5cb0c705cbd67f40b9e71379b1806c0 450 SUPERFAMILY SSF50156 88 185 3.55E-12 T 06-07-2017 IPR001478 PDZ domain GO:0005515 LFZ55_RS15965 117e66736f527297385442b392c9127b 333 Gene3D G3DSA:3.40.640.10 1 245 1.4E-86 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS15965 117e66736f527297385442b392c9127b 333 PIRSF PIRSF017617 1 333 1.4E-130 T 06-07-2017 IPR023603 Threonine aldolase LFZ55_RS15965 117e66736f527297385442b392c9127b 333 SUPERFAMILY SSF53383 1 331 7.7E-113 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS15965 117e66736f527297385442b392c9127b 333 Gene3D G3DSA:3.90.1150.10 246 332 5.9E-25 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS15965 117e66736f527297385442b392c9127b 333 Pfam PF01212 Beta-eliminating lyase 3 282 8.9E-96 T 06-07-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 LFZ55_RS21890 582616bde0aa7138f1ff600feb31131b 171 Pfam PF04186 FxsA cytoplasmic membrane protein 21 122 4.2E-33 T 06-07-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 340 1.4E-100 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 Gene3D G3DSA:3.40.1690.10 211 348 1.6E-49 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 342 3.7E-133 T 06-07-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 SUPERFAMILY SSF160544 237 344 2.49E-30 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 3.3E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 265 280 3.3E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 3.3E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 3.3E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS13115 0fdabaabdf920a2e8a4210a9651bfc53 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 316 3.3E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 06-07-2017 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PIRSF PIRSF500210 1 330 2.7E-124 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 Gene3D G3DSA:3.40.190.80 194 327 1.9E-57 T 06-07-2017 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 3.3E-83 T 06-07-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 42.129 T 06-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 4.5E-71 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 PIRSF PIRSF000904 1 331 1.5E-120 T 06-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 SUPERFAMILY SSF56655 2 326 3.4E-112 T 06-07-2017 LFZ55_RS21455 0659ce14badf02da3cec79fd1958e426 332 Gene3D G3DSA:3.30.540.10 2 192 1.8E-78 T 06-07-2017 LFZ55_RS01000 0b0c3ac2005baf450ac72b02ebeca819 193 Gene3D G3DSA:1.10.340.30 1 182 5.5E-88 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS01000 0b0c3ac2005baf450ac72b02ebeca819 193 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 5.0E-91 T 06-07-2017 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 LFZ55_RS01000 0b0c3ac2005baf450ac72b02ebeca819 193 Pfam PF03352 Methyladenine glycosylase 6 182 3.4E-81 T 06-07-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 LFZ55_RS01000 0b0c3ac2005baf450ac72b02ebeca819 193 SUPERFAMILY SSF48150 1 183 2.92E-82 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LFZ55_RS16880 cd27833a8d8580f65c7379a824a85b3b 379 PIRSF PIRSF000267 2 378 2.0E-135 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS16880 cd27833a8d8580f65c7379a824a85b3b 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 2.5E-111 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS16880 cd27833a8d8580f65c7379a824a85b3b 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 5.7E-205 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 PIRSF PIRSF038996 1 172 2.1E-70 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 Gene3D G3DSA:3.40.50.360 3 168 1.7E-63 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 SUPERFAMILY SSF52218 5 168 5.84E-54 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 06-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 Pfam PF00258 Flavodoxin 6 160 4.5E-34 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS17130 68f4d0b0602bc116555310abe894eaaf 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.5E-77 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 LFZ55_RS14225 009c49c14a7a7b06e21d7ec85e32fffc 274 SUPERFAMILY SSF56112 29 270 2.33E-25 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS14225 009c49c14a7a7b06e21d7ec85e32fffc 274 Gene3D G3DSA:3.90.1200.10 112 271 6.1E-14 T 06-07-2017 LFZ55_RS14225 009c49c14a7a7b06e21d7ec85e32fffc 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 26 270 3.2E-99 T 06-07-2017 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 LFZ55_RS14225 009c49c14a7a7b06e21d7ec85e32fffc 274 Pfam PF01636 Phosphotransferase enzyme family 27 232 1.2E-12 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase LFZ55_RS20200 b38065e932ef6bdf5b0dc5693b0e80e9 335 SUPERFAMILY SSF49401 196 334 1.14E-15 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS20200 b38065e932ef6bdf5b0dc5693b0e80e9 335 Pfam PF00419 Fimbrial protein 188 334 1.7E-25 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 SUPERFAMILY SSF53448 8 292 4.93E-73 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 SUPERFAMILY SSF51182 195 479 4.65E-90 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 8 479 2.1E-240 T 06-07-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 3.1E-75 T 06-07-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 Gene3D G3DSA:3.90.550.10 6 281 3.7E-100 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 Pfam PF00483 Nucleotidyl transferase 10 295 6.1E-77 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS08740 3a098653b01f1ffb7f194a99a57e4328 480 Gene3D G3DSA:2.60.120.10 367 479 1.4E-47 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 246 315 2.5E-15 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 292 307 1.1E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 263 279 1.1E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 246 262 1.1E-6 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 29 315 7.2E-66 T 06-07-2017 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 Gene3D G3DSA:2.30.330.10 246 319 2.8E-18 T 06-07-2017 LFZ55_RS13135 6c163a4b17dcac34d82b7c9ddadb39ad 322 SUPERFAMILY SSF101801 247 316 3.4E-15 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 SUPERFAMILY SSF46785 4 57 2.08E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 Gene3D G3DSA:1.10.10.10 4 55 7.2E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 SMART SM01134 73 233 1.2E-66 T 06-07-2017 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 Gene3D G3DSA:3.40.50.1360 78 222 8.6E-11 T 06-07-2017 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 SMART SM00420 6 58 1.8E-23 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 Pfam PF00455 DeoR C terminal sensor domain 77 231 3.4E-49 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 SUPERFAMILY SSF100950 77 235 3.03E-26 T 06-07-2017 LFZ55_RS04855 43b25b447062e6eaa3550b0457246627 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.0E-17 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS24900 64cafff664feb1295b4922691807179e 882 SUPERFAMILY SSF52540 439 766 3.03E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24900 64cafff664feb1295b4922691807179e 882 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 38 276 1.5E-48 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase LFZ55_RS24900 64cafff664feb1295b4922691807179e 882 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 43 853 2.1E-302 T 06-07-2017 IPR014117 Type-IV secretion system protein TraC LFZ55_RS24900 64cafff664feb1295b4922691807179e 882 Gene3D G3DSA:3.40.50.300 478 548 1.5E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24900 64cafff664feb1295b4922691807179e 882 Gene3D G3DSA:3.40.50.300 639 768 1.5E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14995 3fc0edd614fbeb8ad9bc223c1b8b3f2c 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.4E-161 T 06-07-2017 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15 LFZ55_RS14995 3fc0edd614fbeb8ad9bc223c1b8b3f2c 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 6.0E-88 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS14995 3fc0edd614fbeb8ad9bc223c1b8b3f2c 283 Gene3D G3DSA:3.40.830.10 5 271 2.3E-28 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS14995 3fc0edd614fbeb8ad9bc223c1b8b3f2c 283 SUPERFAMILY SSF53213 12 279 4.05E-51 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Pfam PF13361 UvrD-like helicase C-terminal domain 538 662 8.2E-15 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 SUPERFAMILY SSF52540 195 348 8.43E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 SUPERFAMILY SSF52540 385 676 8.43E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 5.8E-60 T 06-07-2017 IPR022161 DNA helicase IV, N-terminal domain LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Gene3D G3DSA:3.40.50.300 395 492 2.0E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Gene3D G3DSA:3.40.50.300 196 329 2.0E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 198 490 1.1E-42 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS15525 9ddc661033d1a7dbcbf6df3ceed8aa71 684 Gene3D G3DSA:3.40.50.300 498 675 3.2E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 PIRSF PIRSF002070 2 166 2.6E-40 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 Gene3D G3DSA:2.40.50.140 4 176 3.0E-58 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.855 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 2.4E-64 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 Pfam PF00436 Single-strand binding protein family 6 107 1.1E-42 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 LFZ55_RS22405 b6551fe949c9a80f58f1b61ff4436e33 176 SUPERFAMILY SSF50249 4 176 2.91E-62 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 Gene3D G3DSA:3.30.700.10 7 136 5.5E-33 T 06-07-2017 LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-9 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 SUPERFAMILY SSF54523 7 113 3.14E-22 T 06-07-2017 LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 Pfam PF00114 Pilin (bacterial filament) 36 125 2.2E-4 T 06-07-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS19640 89fa14e12157f8b3238457fdf4cf3128 145 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 4.9E-11 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS03085 3d90bd653bc6c0e77cbb52f0e0c4e8d7 220 Pfam PF09335 SNARE associated Golgi protein 48 174 1.6E-22 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 06-07-2017 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 Gene3D G3DSA:2.40.110.10 152 273 9.3E-48 T 06-07-2017 LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 SUPERFAMILY SSF56645 13 282 7.33E-83 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 SUPERFAMILY SSF47203 272 494 1.63E-44 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 PIRSF PIRSF000331 11 501 1.8E-205 T 06-07-2017 IPR004925 HpaB/PvcC/4-BUDH LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 8.1E-65 T 06-07-2017 IPR024719 HpaB/PvcC/4-BUDH C-terminal LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 4.1E-94 T 06-07-2017 IPR024674 HpaB/PvcC/4-BUDH N-terminal LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 Gene3D G3DSA:1.10.3140.10 12 150 1.4E-57 T 06-07-2017 LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 PIRSF PIRSF500125 1 518 1.7E-289 T 06-07-2017 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein LFZ55_RS15015 8c93b3cc3fe348c7fe53af79483a53bd 520 Gene3D G3DSA:1.20.140.10 274 490 1.5E-34 T 06-07-2017 LFZ55_RS12410 1556ffac075c30f9ca38b239c15b5df0 142 Gene3D G3DSA:1.10.530.10 21 93 2.8E-4 T 06-07-2017 LFZ55_RS04385 4d8a234a93b6cb249cd5f7960bc12bde 346 Gene3D G3DSA:3.20.20.100 1 343 6.0E-104 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS04385 4d8a234a93b6cb249cd5f7960bc12bde 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 4.2E-8 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS04385 4d8a234a93b6cb249cd5f7960bc12bde 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 4.2E-8 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LFZ55_RS04385 4d8a234a93b6cb249cd5f7960bc12bde 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.4E-71 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS04385 4d8a234a93b6cb249cd5f7960bc12bde 346 SUPERFAMILY SSF51430 1 344 9.56E-105 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS22070 8dda12569ec296b75e40b895b4d4ccb9 89 Gene3D G3DSA:1.10.3480.10 42 88 2.5E-4 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 Gene3D G3DSA:1.10.10.10 5 73 1.3E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 SMART SM00345 12 71 1.8E-23 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 SUPERFAMILY SSF48008 98 229 1.65E-26 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 Pfam PF07729 FCD domain 100 222 9.9E-24 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 Gene3D G3DSA:1.20.120.530 96 231 2.3E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 SMART SM00895 100 224 1.2E-20 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.6E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.6E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 7.6E-21 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS00765 e78cf82380141f43c5e7bfe28051fb3e 258 SUPERFAMILY SSF46785 7 75 7.14E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 6 236 9.2E-48 T 06-07-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 679 726 1.8E-8 T 06-07-2017 IPR005194 Glycoside hydrolase family 65, C-terminal LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 SUPERFAMILY SSF74650 2 238 2.57E-48 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Gene3D G3DSA:2.60.420.10 661 730 2.0E-18 T 06-07-2017 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 297 675 1.1E-145 T 06-07-2017 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Gene3D G3DSA:2.70.98.40 2 238 3.8E-60 T 06-07-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 PIRSF PIRSF036289 1 738 8.5E-210 T 06-07-2017 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 SUPERFAMILY SSF48208 248 712 2.15E-105 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS11450 7bbad103649a56e42cfe1c048b3671ba 751 Gene3D G3DSA:1.50.10.10 292 660 1.2E-125 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.811 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 Pfam PF02565 Recombination protein O C terminal 83 226 1.3E-22 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 Gene3D G3DSA:2.40.50.140 6 75 5.9E-10 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 SUPERFAMILY SSF57863 86 161 9.15E-8 T 06-07-2017 LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 SUPERFAMILY SSF50249 5 75 1.88E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 Pfam PF11967 Recombination protein O N terminal 5 76 8.6E-23 T 06-07-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal LFZ55_RS06005 f0df7d4128f3e9ad437606dd6d17fa5b 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.1E-37 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 Gene3D G3DSA:3.30.1360.60 399 474 1.2E-27 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 SUPERFAMILY SSF55604 401 474 1.7E-20 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 2.2E-84 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.5E-24 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 2.4E-13 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 5.0E-234 T 06-07-2017 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 2.6E-90 T 06-07-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS14250 d0c8900594f7a8584ab0b4a75dd46690 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LFZ55_RS18900 7b8a6e209842c1a26d5c685b5b04dbfa 80 Pfam PF06287 Protein of unknown function (DUF1039) 19 62 1.4E-7 T 06-07-2017 IPR010437 Type III secretion system SsaH LFZ55_RS00670 d0dffb2f3637f4b3eb49b47db98ef4be 381 Pfam PF00534 Glycosyl transferases group 1 180 355 2.5E-41 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS00670 d0dffb2f3637f4b3eb49b47db98ef4be 381 SUPERFAMILY SSF53756 4 375 2.29E-60 T 06-07-2017 LFZ55_RS00670 d0dffb2f3637f4b3eb49b47db98ef4be 381 Gene3D G3DSA:3.40.50.2000 162 354 4.9E-31 T 06-07-2017 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 SUPERFAMILY SSF49863 673 782 1.96E-25 T 06-07-2017 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 55 373 2.2E-98 T 06-07-2017 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 SUPERFAMILY SSF48230 34 391 4.73E-90 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Gene3D G3DSA:2.60.220.10 673 782 2.1E-23 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 417 663 1.7E-56 T 06-07-2017 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Gene3D G3DSA:2.70.98.10 419 665 1.5E-62 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 675 734 7.9E-11 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 SUPERFAMILY SSF74650 415 680 7.33E-58 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS20775 51fc0015cb64224e175c24755d83c3a0 785 Gene3D G3DSA:1.50.10.100 26 374 5.9E-108 T 06-07-2017 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 Gene3D G3DSA:3.40.710.10 29 284 4.3E-94 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 SMART SM00936 284 375 6.7E-28 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 SUPERFAMILY SSF56601 2 284 2.42E-76 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 264 3.5E-96 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 SUPERFAMILY SSF69189 284 377 5.1E-23 T 06-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 Gene3D G3DSA:2.60.410.10 285 375 2.2E-26 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS08935 23c1b791eadd2bd205d7d58f8a941660 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 375 6.7E-21 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LFZ55_RS11930 343033e621a46e28ec04b2a9c829307b 198 Gene3D G3DSA:3.40.50.150 7 196 1.7E-37 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS11930 343033e621a46e28ec04b2a9c829307b 198 SUPERFAMILY SSF53335 6 196 1.77E-35 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS11930 343033e621a46e28ec04b2a9c829307b 198 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 2.0E-104 T 06-07-2017 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 LFZ55_RS11930 343033e621a46e28ec04b2a9c829307b 198 Pfam PF03848 Tellurite resistance protein TehB 1 193 1.2E-101 T 06-07-2017 IPR015985 Tellurite resistance methyltransferase TehB-like domain LFZ55_RS08770 23f5c889bcde529a7c1ccdfff087475e 467 Gene3D G3DSA:2.160.20.10 26 345 3.9E-5 T 06-07-2017 IPR012334 Pectin lyase fold LFZ55_RS08770 23f5c889bcde529a7c1ccdfff087475e 467 SUPERFAMILY SSF51126 52 325 1.48E-20 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS08770 23f5c889bcde529a7c1ccdfff087475e 467 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 3 465 5.1E-291 T 06-07-2017 IPR023882 Colanic acid biosynthesis WcaM LFZ55_RS18655 a858eb0a7d6ec71b45b4f84d3c351aaa 417 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LFZ55_RS18655 a858eb0a7d6ec71b45b4f84d3c351aaa 417 Gene3D G3DSA:1.20.1250.20 212 390 6.0E-21 T 06-07-2017 LFZ55_RS18655 a858eb0a7d6ec71b45b4f84d3c351aaa 417 Pfam PF07690 Major Facilitator Superfamily 23 352 6.1E-40 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS18655 a858eb0a7d6ec71b45b4f84d3c351aaa 417 SUPERFAMILY SSF103473 7 398 1.57E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS18655 a858eb0a7d6ec71b45b4f84d3c351aaa 417 Gene3D G3DSA:1.20.1250.20 16 197 4.8E-32 T 06-07-2017 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Pfam PF00708 Acylphosphatase 9 91 1.4E-17 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Gene3D G3DSA:3.30.70.100 6 91 3.2E-26 T 06-07-2017 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Pfam PF01300 Telomere recombination 209 373 4.4E-48 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Pfam PF07503 HypF finger 158 190 4.5E-15 T 06-07-2017 IPR011125 Zinc finger, HypF-type GO:0008270 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Pfam PF07503 HypF finger 108 141 5.5E-16 T 06-07-2017 IPR011125 Zinc finger, HypF-type GO:0008270 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 SUPERFAMILY SSF55821 175 379 2.14E-47 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 PIRSF PIRSF006256 5 744 5.5E-272 T 06-07-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 1.7E-297 T 06-07-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 Gene3D G3DSA:3.90.870.10 197 368 1.6E-44 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 SUPERFAMILY SSF54975 9 91 1.5E-21 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS05195 4ee2dfd6873263bf3f438359b7cd1964 744 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 06-07-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 06-07-2017 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 Pfam PF01491 Frataxin-like domain 1 102 4.5E-30 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.306 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 SUPERFAMILY SSF55387 1 105 4.01E-40 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 SMART SM01219 1 106 3.1E-57 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 1.2E-43 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS23715 33b28d9638fcdaf65adc8ace013cc1ca 106 Gene3D G3DSA:3.30.920.10 1 105 1.1E-36 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 SUPERFAMILY SSF48452 36 84 2.78E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 SUPERFAMILY SSF48452 193 237 2.78E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 SUPERFAMILY SSF48452 509 557 2.78E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 Gene3D G3DSA:1.25.40.10 26 104 1.4E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 Gene3D G3DSA:1.25.40.10 198 229 1.4E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS15340 e5e9fbdc430bea96a72815acc471acf1 879 Gene3D G3DSA:1.25.40.10 517 562 1.4E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 Gene3D G3DSA:3.30.1120.10 459 540 7.4E-19 T 06-07-2017 LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 ProSitePatterns PS00523 Sulfatases signature 1. 70 82 - T 06-07-2017 IPR024607 Sulfatase, conserved site LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 ProSitePatterns PS00149 Sulfatases signature 2. 124 134 - T 06-07-2017 IPR024607 Sulfatase, conserved site LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 Pfam PF00884 Sulfatase 26 428 5.0E-64 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 Gene3D G3DSA:3.40.720.10 23 455 2.2E-109 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS03650 3009fe935b3b8efafa66526254b67feb 579 SUPERFAMILY SSF53649 24 532 2.22E-126 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 Gene3D G3DSA:3.20.20.70 2 212 2.1E-77 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 SUPERFAMILY SSF51569 4 209 9.71E-69 T 06-07-2017 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 06-07-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 Pfam PF01081 KDPG and KHG aldolase 9 203 2.0E-92 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 06-07-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS10020 5f286a27783ec49f45b88e9405325568 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.0E-86 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.3E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 SUPERFAMILY SSF46785 6 88 9.84E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 Gene3D G3DSA:3.40.190.10 174 258 9.3E-6 T 06-07-2017 LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 SUPERFAMILY SSF53850 88 290 5.79E-29 T 06-07-2017 LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 Gene3D G3DSA:3.40.190.10 89 173 1.5E-8 T 06-07-2017 LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 Gene3D G3DSA:1.10.10.10 6 88 8.2E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13080 4c221cbc6423ea2d07f9dd2b49da7402 310 Pfam PF03466 LysR substrate binding domain 88 290 4.1E-27 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS20660 7a8efbd1e52ab362b30066dacf88ff0e 394 Gene3D G3DSA:1.20.1250.20 212 379 8.9E-12 T 06-07-2017 LFZ55_RS20660 7a8efbd1e52ab362b30066dacf88ff0e 394 Gene3D G3DSA:1.20.1250.20 17 194 3.3E-9 T 06-07-2017 LFZ55_RS20660 7a8efbd1e52ab362b30066dacf88ff0e 394 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 380 5.6E-133 T 06-07-2017 IPR010645 Uncharacterised MFS-type transporter YbfB LFZ55_RS20660 7a8efbd1e52ab362b30066dacf88ff0e 394 SUPERFAMILY SSF103473 16 387 2.75E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS18515 36c75a5690fcf86475ffabf7cf3d72f2 106 Pfam PF07769 psiF repeat 27 59 2.2E-17 T 06-07-2017 IPR011690 Phosphate-starvation-induced PsiF repeat LFZ55_RS18515 36c75a5690fcf86475ffabf7cf3d72f2 106 Pfam PF07769 psiF repeat 71 103 2.5E-16 T 06-07-2017 IPR011690 Phosphate-starvation-induced PsiF repeat LFZ55_RS11090 087f15aa7d495e4fa06214f71a0fd3cb 133 Gene3D G3DSA:3.10.129.10 7 130 4.8E-43 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS11090 087f15aa7d495e4fa06214f71a0fd3cb 133 SUPERFAMILY SSF54637 8 130 9.16E-39 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS11090 087f15aa7d495e4fa06214f71a0fd3cb 133 Pfam PF03061 Thioesterase superfamily 26 97 1.6E-18 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 LFZ55_RS05175 2ec0e23648b5753cbe58fb60d9e8446b 255 SUPERFAMILY SSF56770 36 168 7.2E-50 T 06-07-2017 LFZ55_RS05175 2ec0e23648b5753cbe58fb60d9e8446b 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05175 2ec0e23648b5753cbe58fb60d9e8446b 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05175 2ec0e23648b5753cbe58fb60d9e8446b 255 Gene3D G3DSA:3.40.50.700 37 161 1.3E-26 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 SUPERFAMILY SSF51430 13 328 2.49E-92 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 283 296 3.0E-5 T 06-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 3.0E-5 T 06-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 282 3.0E-5 T 06-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 Gene3D G3DSA:3.20.20.100 12 329 1.4E-89 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS07185 a99babfeab144aacb1cbaae266d38ed3 332 Pfam PF00248 Aldo/keto reductase family 28 328 1.5E-68 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain LFZ55_RS15425 59a2dbaa1681f430944256f694db42d5 114 Gene3D G3DSA:3.30.450.20 21 112 4.4E-39 T 06-07-2017 LFZ55_RS15425 59a2dbaa1681f430944256f694db42d5 114 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 12 109 9.8E-40 T 06-07-2017 IPR009320 YagB/YeeU/YfjZ LFZ55_RS15425 59a2dbaa1681f430944256f694db42d5 114 SUPERFAMILY SSF143737 4 110 4.58E-44 T 06-07-2017 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 Gene3D G3DSA:3.40.190.10 110 218 6.9E-45 T 06-07-2017 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 PIRSF PIRSF004846 1 257 5.6E-83 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 2.1E-85 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 SUPERFAMILY SSF53850 28 255 3.59E-70 T 06-07-2017 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 3.7E-50 T 06-07-2017 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 Gene3D G3DSA:3.40.190.10 28 109 1.2E-15 T 06-07-2017 LFZ55_RS16705 2acfbb0563c07cfbf9611693d26646e0 257 Gene3D G3DSA:3.40.190.10 219 255 1.2E-15 T 06-07-2017 LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 SUPERFAMILY SSF51735 137 271 5.09E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 Gene3D G3DSA:3.90.180.10 93 161 6.1E-13 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 SUPERFAMILY SSF50129 1 167 3.93E-13 T 06-07-2017 IPR011032 GroES-like LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 Gene3D G3DSA:3.40.50.720 162 268 1.7E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 Pfam PF00107 Zinc-binding dehydrogenase 168 270 1.0E-24 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS11435 2f30fc9740a3413fc65879895db5886d 350 Gene3D G3DSA:3.90.180.10 1 92 6.2E-5 T 06-07-2017 IPR011032 GroES-like LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 8.6E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 8.6E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 SUPERFAMILY SSF46689 270 317 1.25E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 Gene3D G3DSA:1.10.10.60 270 317 3.5E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 SMART SM00342 233 316 2.5E-24 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS10715 d4bf9c7ef5b6f381d0b134c9a0f10076 319 Pfam PF12833 Helix-turn-helix domain 239 317 3.1E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS11955 d2aa0f030cb2f94cb5a58b005a5a8bad 76 Pfam PF10829 Protein of unknown function (DUF2554) 1 76 2.6E-51 T 06-07-2017 IPR020117 Uncharacterised protein family YncJ LFZ55_RS11955 d2aa0f030cb2f94cb5a58b005a5a8bad 76 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 73 2.0E-33 T 06-07-2017 IPR020117 Uncharacterised protein family YncJ LFZ55_RS01005 f7467ab36d69f982f8685cdc4027caf3 234 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 91 234 6.1E-6 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS01005 f7467ab36d69f982f8685cdc4027caf3 234 PIRSF PIRSF030748 1 234 4.5E-158 T 06-07-2017 IPR016955 Autotransporter, YhjY, predicted LFZ55_RS01005 f7467ab36d69f982f8685cdc4027caf3 234 Gene3D G3DSA:2.40.128.130 90 234 6.6E-12 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS01005 f7467ab36d69f982f8685cdc4027caf3 234 SUPERFAMILY SSF103515 88 234 8.5E-13 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS01005 f7467ab36d69f982f8685cdc4027caf3 234 Pfam PF03797 Autotransporter beta-domain 91 217 6.4E-13 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 SMART SM00382 337 506 3.4E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 SMART SM00382 26 223 1.1E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Pfam PF00005 ABC transporter 17 178 9.9E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Pfam PF00005 ABC transporter 328 459 2.2E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 SUPERFAMILY SSF52540 294 516 2.43E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Gene3D G3DSA:3.40.50.300 1 265 4.2E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Gene3D G3DSA:3.40.50.300 310 539 1.3E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Pfam PF16326 ABC transporter C-terminal domain 557 622 7.1E-8 T 06-07-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 Pfam PF12848 ABC transporter 217 296 1.7E-29 T 06-07-2017 IPR032781 ABC-transporter extension domain LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 SUPERFAMILY SSF52540 119 253 6.73E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01930 a4a28e64c8863ccad717cf6e5bdba1df 633 SUPERFAMILY SSF52540 2 92 6.73E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS06395 995e2f833d9bbcad6db3e27c1e46b287 154 SUPERFAMILY SSF53098 4 151 4.55E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS06395 995e2f833d9bbcad6db3e27c1e46b287 154 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 147 5.2E-6 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS06395 995e2f833d9bbcad6db3e27c1e46b287 154 Gene3D G3DSA:3.30.420.10 4 147 1.1E-5 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 SUPERFAMILY SSF54060 4 103 2.24E-20 T 06-07-2017 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 SUPERFAMILY SSF54171 107 160 2.22E-13 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 SMART SM00380 108 165 9.5E-5 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 Gene3D G3DSA:3.30.730.10 109 158 4.8E-8 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 Pfam PF00847 AP2 domain 107 156 9.9E-9 T 06-07-2017 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 LFZ55_RS06340 bb5eec08d89abfd06ab1cceb2c7513fb 171 Pfam PF13392 HNH endonuclease 53 96 4.3E-10 T 06-07-2017 IPR003615 HNH nuclease LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 SUPERFAMILY SSF53850 129 308 2.9E-13 T 06-07-2017 LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 Pfam PF03466 LysR substrate binding domain 130 308 1.5E-6 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 2.7E-11 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 Gene3D G3DSA:3.40.190.10 174 279 1.2E-6 T 06-07-2017 LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 SUPERFAMILY SSF46785 9 87 2.31E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20250 4dbbc2ac4746c4cc80d75cb5c969a4a6 315 Gene3D G3DSA:1.10.10.10 8 87 2.1E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS09795 a3e0cefa80ba5063457c055a1b72c2e7 142 Gene3D G3DSA:3.40.50.620 3 138 8.5E-25 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS09795 a3e0cefa80ba5063457c055a1b72c2e7 142 Pfam PF00582 Universal stress protein family 3 138 1.7E-16 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS09795 a3e0cefa80ba5063457c055a1b72c2e7 142 SUPERFAMILY SSF52402 3 138 1.17E-25 T 06-07-2017 LFZ55_RS09795 a3e0cefa80ba5063457c055a1b72c2e7 142 PIRSF PIRSF006276 1 141 3.6E-46 T 06-07-2017 IPR006015 Universal stress protein A LFZ55_RS03920 e742a5e8ad2486d7197f7337bf27ad01 459 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 453 3.5E-11 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS03920 e742a5e8ad2486d7197f7337bf27ad01 459 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 1.8E-147 T 06-07-2017 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 LFZ55_RS03920 e742a5e8ad2486d7197f7337bf27ad01 459 SUPERFAMILY SSF52794 369 455 1.18E-21 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS03920 e742a5e8ad2486d7197f7337bf27ad01 459 Gene3D G3DSA:3.40.50.10370 369 457 1.1E-30 T 06-07-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LFZ55_RS03920 e742a5e8ad2486d7197f7337bf27ad01 459 Pfam PF02378 Phosphotransferase system, EIIC 20 277 1.5E-21 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 PIRSF PIRSF036979 12 304 1.8E-101 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 Pfam PF00491 Arginase family 34 297 7.3E-86 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 Gene3D G3DSA:3.40.800.10 11 302 3.0E-97 T 06-07-2017 IPR023696 Ureohydrolase domain LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.081 T 06-07-2017 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 SUPERFAMILY SSF52768 13 301 1.67E-91 T 06-07-2017 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 6.6E-117 T 06-07-2017 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 LFZ55_RS03900 c7e97e1ef7cf40504f8d095ea1d87cc5 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 06-07-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 LFZ55_RS13085 f86a3626eb203b6ff357f81664b1747f 401 Gene3D G3DSA:1.20.1250.20 200 375 1.3E-8 T 06-07-2017 LFZ55_RS13085 f86a3626eb203b6ff357f81664b1747f 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 379 2.2E-132 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LFZ55_RS13085 f86a3626eb203b6ff357f81664b1747f 401 Gene3D G3DSA:1.20.1250.20 9 188 2.9E-28 T 06-07-2017 LFZ55_RS13085 f86a3626eb203b6ff357f81664b1747f 401 Pfam PF07690 Major Facilitator Superfamily 14 341 1.1E-38 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS13085 f86a3626eb203b6ff357f81664b1747f 401 SUPERFAMILY SSF103473 7 376 4.32E-55 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS07805 8f5f28c1a91afefa001b8a1303344351 307 Pfam PF04754 Putative transposase, YhgA-like 8 209 5.3E-84 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS07805 8f5f28c1a91afefa001b8a1303344351 307 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 302 2.2E-54 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS19165 4ec64696a1b19e82a61ac57c9cddbc0a 271 SUPERFAMILY SSF53850 33 271 1.48E-85 T 06-07-2017 LFZ55_RS19165 4ec64696a1b19e82a61ac57c9cddbc0a 271 Gene3D G3DSA:3.40.190.10 30 162 3.1E-62 T 06-07-2017 LFZ55_RS19165 4ec64696a1b19e82a61ac57c9cddbc0a 271 PIRSF PIRSF002854 1 271 1.4E-109 T 06-07-2017 IPR004872 Lipoprotein NlpA family LFZ55_RS19165 4ec64696a1b19e82a61ac57c9cddbc0a 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.8E-151 T 06-07-2017 IPR004872 Lipoprotein NlpA family LFZ55_RS19165 4ec64696a1b19e82a61ac57c9cddbc0a 271 Pfam PF03180 NLPA lipoprotein 33 271 3.2E-102 T 06-07-2017 IPR004872 Lipoprotein NlpA family LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.0E-25 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.0E-25 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 2.0E-25 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.0E-25 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 SUPERFAMILY SSF46785 5 143 1.21E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 SMART SM00347 31 132 2.0E-33 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 Gene3D G3DSA:1.10.10.10 13 142 3.1E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12565 bdc467712a3cd35069bac8dd488fa33e 144 Pfam PF01047 MarR family 38 96 6.2E-19 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LFZ55_RS00200 718e9c851430e7ba32a09efe3154e356 176 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 176 4.0E-101 T 06-07-2017 LFZ55_RS00200 718e9c851430e7ba32a09efe3154e356 176 Gene3D G3DSA:3.20.20.70 14 134 5.6E-8 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS00200 718e9c851430e7ba32a09efe3154e356 176 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 110 137 1.1E-6 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS00200 718e9c851430e7ba32a09efe3154e356 176 SUPERFAMILY SSF102114 14 128 8.63E-6 T 06-07-2017 LFZ55_RS12675 2016922be8993ae0c67d4cd3f9208811 186 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 1.9E-20 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS12675 2016922be8993ae0c67d4cd3f9208811 186 Gene3D G3DSA:3.40.630.30 6 165 5.8E-43 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS12675 2016922be8993ae0c67d4cd3f9208811 186 SUPERFAMILY SSF55729 6 164 1.63E-41 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 SUPERFAMILY SSF141523 376 429 3.92E-20 T 06-07-2017 LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 SUPERFAMILY SSF141523 485 534 3.92E-20 T 06-07-2017 LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Pfam PF03734 L,D-transpeptidase catalytic domain 378 544 8.2E-31 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Gene3D G3DSA:1.10.101.10 235 272 6.1E-23 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Gene3D G3DSA:1.10.101.10 315 358 6.1E-23 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 SUPERFAMILY SSF47090 315 357 3.77E-13 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 SUPERFAMILY SSF47090 235 270 3.77E-13 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Gene3D G3DSA:2.40.440.10 487 535 1.1E-13 T 06-07-2017 LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Gene3D G3DSA:2.40.440.10 372 420 1.1E-13 T 06-07-2017 LFZ55_RS15655 47f3ecd968a211b25a9cbdf8479d486e 616 Pfam PF01471 Putative peptidoglycan binding domain 316 349 1.8E-7 T 06-07-2017 IPR002477 Peptidoglycan binding-like LFZ55_RS08985 a563e5f280dda679477e4c5d24007ed1 370 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS08985 a563e5f280dda679477e4c5d24007ed1 370 Gene3D G3DSA:1.20.1090.10 166 369 1.1E-62 T 06-07-2017 LFZ55_RS08985 a563e5f280dda679477e4c5d24007ed1 370 SUPERFAMILY SSF56796 3 368 2.36E-103 T 06-07-2017 LFZ55_RS08985 a563e5f280dda679477e4c5d24007ed1 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 359 7.0E-106 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS08985 a563e5f280dda679477e4c5d24007ed1 370 Gene3D G3DSA:3.40.50.1970 1 165 8.8E-45 T 06-07-2017 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 SUPERFAMILY SSF56935 23 696 4.19E-147 T 06-07-2017 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 Pfam PF00593 TonB dependent receptor 461 693 1.6E-31 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 156 5.2E-24 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 696 3.9E-140 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 Gene3D G3DSA:2.170.130.10 36 163 1.0E-35 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS18615 e0b6b8bebd7b6ed1bf4d5c5cb4709204 696 Gene3D G3DSA:2.40.170.20 170 696 8.2E-158 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS21350 17c1b8798a0c52707488f59b40aaeabe 80 Pfam PF04221 RelB antitoxin 1 69 3.3E-15 T 06-07-2017 IPR007337 RelB antitoxin/Antitoxin DinJ LFZ55_RS21350 17c1b8798a0c52707488f59b40aaeabe 80 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 80 2.6E-22 T 06-07-2017 IPR007337 RelB antitoxin/Antitoxin DinJ LFZ55_RS02610 3b94cf17af2323f425874370fea9e6a8 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 1.1E-60 T 06-07-2017 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 LFZ55_RS02610 3b94cf17af2323f425874370fea9e6a8 163 SUPERFAMILY SSF55804 9 155 1.7E-40 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LFZ55_RS02610 3b94cf17af2323f425874370fea9e6a8 163 Gene3D G3DSA:3.40.930.10 3 160 9.0E-47 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS02610 3b94cf17af2323f425874370fea9e6a8 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS02610 3b94cf17af2323f425874370fea9e6a8 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 2.5E-35 T 06-07-2017 IPR002178 PTS EIIA type-2 domain LFZ55_RS09815 fb43dcb9abf5fbca8a8e153cdbdc862a 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 2.0E-11 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LFZ55_RS09815 fb43dcb9abf5fbca8a8e153cdbdc862a 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 06-07-2017 IPR000540 Flagellar motor protein MotA, conserved site LFZ55_RS09815 fb43dcb9abf5fbca8a8e153cdbdc862a 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 4.2E-117 T 06-07-2017 IPR022522 Flagellar motor stator, MotA LFZ55_RS01075 649613598766fb4ef072171bb8758be0 559 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 23 557 6.9E-246 T 06-07-2017 IPR017744 Cellulose biosynthesis protein BcsG LFZ55_RS01075 649613598766fb4ef072171bb8758be0 559 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 554 3.7E-236 T 06-07-2017 IPR017744 Cellulose biosynthesis protein BcsG LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 06-07-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 06-07-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 91 2.8E-40 T 06-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 2.8E-31 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 06-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02060 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 6.0E-36 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS08970 0fafe5e113832b19856a95ba3ba36aff 116 SMART SM00877 44 116 1.2E-16 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS08970 0fafe5e113832b19856a95ba3ba36aff 116 PIRSF PIRSF012296 1 116 3.3E-57 T 06-07-2017 IPR009307 Ethanolamine utilisation EutS GO:0006580 LFZ55_RS08970 0fafe5e113832b19856a95ba3ba36aff 116 SUPERFAMILY SSF143414 44 108 2.62E-14 T 06-07-2017 LFZ55_RS08970 0fafe5e113832b19856a95ba3ba36aff 116 Pfam PF00936 BMC domain 45 105 9.0E-13 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS20575 70b904898d249d9ab18f41ad6464c4f4 245 Pfam PF01695 IstB-like ATP binding protein 93 218 8.0E-18 T 06-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 LFZ55_RS20575 70b904898d249d9ab18f41ad6464c4f4 245 SMART SM00382 98 227 1.6E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS20575 70b904898d249d9ab18f41ad6464c4f4 245 SUPERFAMILY SSF52540 64 223 1.19E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20575 70b904898d249d9ab18f41ad6464c4f4 245 PIRSF PIRSF003073 1 245 8.2E-36 T 06-07-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LFZ55_RS20575 70b904898d249d9ab18f41ad6464c4f4 245 Gene3D G3DSA:3.40.50.300 51 222 1.3E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24450 f79c92782155fbdd834865c9044ff65a 109 PIRSF PIRSF039032 1 109 5.8E-41 T 06-07-2017 IPR009387 Toxin HigB-2 LFZ55_RS24450 f79c92782155fbdd834865c9044ff65a 109 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 46 103 1.4E-8 T 06-07-2017 IPR009387 Toxin HigB-2 LFZ55_RS05850 878fb867e80415b4656f6047a184172c 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 3.1E-79 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LFZ55_RS05850 878fb867e80415b4656f6047a184172c 243 Gene3D G3DSA:3.60.140.10 3 242 9.6E-99 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LFZ55_RS05850 878fb867e80415b4656f6047a184172c 243 SUPERFAMILY SSF64438 3 242 1.61E-90 T 06-07-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic LFZ55_RS05850 878fb867e80415b4656f6047a184172c 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.8E-78 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 SMART SM00411 1 90 1.5E-42 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.4E-33 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-36 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.0E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.0E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS18205 e805b500ec969fcfff3d8a4857df1e08 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.0E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 1.5E-109 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 SUPERFAMILY SSF103473 6 397 7.15E-46 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 401 6.1E-204 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 64 78 - T 06-07-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 Pfam PF01306 LacY proton/sugar symporter 2 411 3.9E-205 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 Gene3D G3DSA:1.20.1250.20 4 190 4.4E-36 T 06-07-2017 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 Gene3D G3DSA:1.20.1250.20 209 401 8.1E-44 T 06-07-2017 LFZ55_RS19540 389f0292749676938a0ce6a420da7cba 418 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 280 294 - T 06-07-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 LFZ55_RS05635 a6caaa0ec1aa1fd60a586e1b71a43773 202 Pfam PF15977 Winged helix-turn-helix DNA binding 141 199 8.4E-19 T 06-07-2017 LFZ55_RS21565 8d75a52c124b9806018a98c709fd9760 308 SUPERFAMILY SSF103481 204 305 1.7E-8 T 06-07-2017 LFZ55_RS21565 8d75a52c124b9806018a98c709fd9760 308 Pfam PF00892 EamA-like transporter family 171 304 4.3E-15 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS21565 8d75a52c124b9806018a98c709fd9760 308 Pfam PF00892 EamA-like transporter family 17 158 9.6E-17 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS21565 8d75a52c124b9806018a98c709fd9760 308 SUPERFAMILY SSF103481 57 162 1.19E-13 T 06-07-2017 LFZ55_RS00030 630b32b9186f3e67983ae59f94269353 643 Pfam PF16889 Heparinase II/III N-terminus 233 322 7.0E-7 T 06-07-2017 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 LFZ55_RS00030 630b32b9186f3e67983ae59f94269353 643 Pfam PF07940 Heparinase II/III-like protein 367 505 1.4E-15 T 06-07-2017 IPR012480 Heparinase II/III-like GO:0016829 LFZ55_RS00030 630b32b9186f3e67983ae59f94269353 643 SUPERFAMILY SSF48230 82 335 7.69E-27 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 LFZ55_RS00030 630b32b9186f3e67983ae59f94269353 643 Gene3D G3DSA:1.50.10.110 95 338 4.4E-19 T 06-07-2017 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 06-07-2017 IPR027486 Ribosomal protein S10 domain LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 06-07-2017 IPR027486 Ribosomal protein S10 domain LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 06-07-2017 IPR027486 Ribosomal protein S10 domain LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 06-07-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02035 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 06-07-2017 IPR027486 Ribosomal protein S10 domain LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 SUPERFAMILY SSF109755 321 531 8.16E-24 T 06-07-2017 LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 5.1E-162 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 1.5E-35 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 Pfam PF02690 Na+/Pi-cotransporter 158 250 5.7E-8 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 3.3E-132 T 06-07-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 LFZ55_RS22630 5874756a99fe05ef4e1ec6d4ae001962 543 Gene3D G3DSA:1.20.58.220 327 421 7.4E-4 T 06-07-2017 LFZ55_RS02870 f45c2299fe2af1cb10d814f58c34d81b 211 SMART SM00859 3 103 0.004 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LFZ55_RS02870 f45c2299fe2af1cb10d814f58c34d81b 211 Gene3D G3DSA:3.40.50.720 2 209 5.0E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02870 f45c2299fe2af1cb10d814f58c34d81b 211 Pfam PF13460 NAD(P)H-binding 8 190 2.3E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02870 f45c2299fe2af1cb10d814f58c34d81b 211 SUPERFAMILY SSF51735 2 200 6.28E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01485 9588b6aff2be49c3860bd5244d1c4737 138 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 138 1.0E-41 T 06-07-2017 IPR020158 Protein of unknown function DUF2756 LFZ55_RS01485 9588b6aff2be49c3860bd5244d1c4737 138 Pfam PF10956 Protein of unknown function (DUF2756) 1 104 1.0E-51 T 06-07-2017 IPR020158 Protein of unknown function DUF2756 LFZ55_RS12120 e17486e4a22d0c46a5e78feb384e6cb8 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 3.2E-10 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS12120 e17486e4a22d0c46a5e78feb384e6cb8 192 SUPERFAMILY SSF46689 4 69 5.13E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS12120 e17486e4a22d0c46a5e78feb384e6cb8 192 SUPERFAMILY SSF48498 78 187 3.05E-17 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS12120 e17486e4a22d0c46a5e78feb384e6cb8 192 Gene3D G3DSA:1.10.357.10 5 186 5.0E-31 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS13400 02799fe9b58d5dcac29cd776a3c6d4bb 372 Pfam PF01594 Domain of unknown function DUF20 15 344 3.4E-62 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like LFZ55_RS01545 9eff4458a995f27c8913e543a03a2d51 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 4.4E-177 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS01545 9eff4458a995f27c8913e543a03a2d51 446 Pfam PF02447 GntP family permease 5 441 9.8E-168 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS01545 9eff4458a995f27c8913e543a03a2d51 446 PIRSF PIRSF002746 1 446 5.3E-156 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 PIRSF PIRSF001619 1 319 2.7E-140 T 06-07-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 Gene3D G3DSA:3.20.20.70 6 314 4.4E-106 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 SUPERFAMILY SSF102114 6 313 1.15E-94 T 06-07-2017 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 SMART SM00729 43 255 4.1E-43 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.3E-125 T 06-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.1E-20 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 Pfam PF04055 Radical SAM superfamily 50 203 1.5E-18 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 SMART SM00876 220 312 1.1E-48 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS16635 10e498952c466395a57fecdd686d28cc 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.794 T 06-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 LFZ55_RS04525 fbc5783b73cc6f4731910dfe715c6217 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 1.9E-22 T 06-07-2017 IPR010305 Protein of unknown function DUF903 LFZ55_RS04525 fbc5783b73cc6f4731910dfe715c6217 75 Gene3D G3DSA:2.30.30.100 20 74 1.6E-30 T 06-07-2017 LFZ55_RS04525 fbc5783b73cc6f4731910dfe715c6217 75 SUPERFAMILY SSF50182 23 72 1.91E-17 T 06-07-2017 IPR010920 LSM domain LFZ55_RS23260 7dc1718149629c78588d758089749068 70 Pfam PF07338 Protein of unknown function (DUF1471) 24 68 7.3E-10 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS23260 7dc1718149629c78588d758089749068 70 SUPERFAMILY SSF159871 2 70 1.57E-14 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS23260 7dc1718149629c78588d758089749068 70 Gene3D G3DSA:3.30.1660.10 24 70 1.7E-11 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS08365 60a3e07fcc08da5a2e5cb1218056d6cc 132 Pfam PF03788 LrgA family 23 113 7.8E-29 T 06-07-2017 IPR005538 LrgA/CidA family GO:0016021 LFZ55_RS08365 60a3e07fcc08da5a2e5cb1218056d6cc 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.804 T 06-07-2017 IPR022957 Uncharacterised protein family UPF0299 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:1.20.1640.10 294 509 2.6E-54 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:3.30.2090.10 719 804 5.6E-17 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82866 801 1024 3.27E-45 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82714 192 275 8.76E-17 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82693 565 661 1.31E-16 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:3.30.70.1430 49 151 6.9E-30 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82714 719 800 1.7E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82866 299 498 9.94E-45 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.519 T 06-07-2017 IPR022831 Multidrug resistance protein MdtB LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:1.10.3850.10 808 1024 2.0E-56 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.9E-78 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:3.30.2090.10 192 275 5.5E-18 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82693 49 138 4.39E-23 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82693 146 191 4.36E-22 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 SUPERFAMILY SSF82693 277 333 4.36E-22 T 06-07-2017 LFZ55_RS08615 63129b4244d0ef9b6948d54e5385f2fb 1040 Gene3D G3DSA:3.30.70.1430 568 655 5.0E-12 T 06-07-2017 LFZ55_RS03355 47969a591ccdb7832831d3d0be2bdc8e 193 Pfam PF02525 Flavodoxin-like fold 3 188 8.0E-36 T 06-07-2017 IPR003680 Flavodoxin-like fold LFZ55_RS03355 47969a591ccdb7832831d3d0be2bdc8e 193 SUPERFAMILY SSF52218 1 192 5.24E-41 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS03355 47969a591ccdb7832831d3d0be2bdc8e 193 Gene3D G3DSA:3.40.50.360 1 192 3.7E-44 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS00660 f4369769fd2643cee7226761d1fb0679 232 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 3.5E-131 T 06-07-2017 IPR009330 Lipopolysaccharide core heptose(II) kinase LFZ55_RS00660 f4369769fd2643cee7226761d1fb0679 232 SUPERFAMILY SSF56112 22 71 2.89E-10 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS00660 f4369769fd2643cee7226761d1fb0679 232 SUPERFAMILY SSF56112 98 202 2.89E-10 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS24210 865292d5b46106ddee57178526fd6af3 354 SUPERFAMILY SSF52540 78 347 1.47E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24210 865292d5b46106ddee57178526fd6af3 354 Gene3D G3DSA:3.40.50.300 77 348 4.5E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24210 865292d5b46106ddee57178526fd6af3 354 Pfam PF13614 AAA domain 78 262 4.0E-33 T 06-07-2017 IPR025669 AAA domain LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 Gene3D G3DSA:3.40.570.10 42 278 1.6E-49 T 06-07-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 SMART SM00892 61 265 2.4E-40 T 06-07-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 SUPERFAMILY SSF54060 44 273 1.12E-48 T 06-07-2017 LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 Pfam PF01223 DNA/RNA non-specific endonuclease 45 263 1.1E-44 T 06-07-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 SMART SM00477 62 265 3.0E-47 T 06-07-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 LFZ55_RS13525 7add3bd1954e460573f4b72930e38a29 284 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 123 131 - T 06-07-2017 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 LFZ55_RS03320 de4325d7b19d598b6d428aeb9e6d28cb 493 Gene3D G3DSA:1.20.1600.10 15 435 3.1E-94 T 06-07-2017 LFZ55_RS03320 de4325d7b19d598b6d428aeb9e6d28cb 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 441 7.5E-142 T 06-07-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LFZ55_RS03320 de4325d7b19d598b6d428aeb9e6d28cb 493 SUPERFAMILY SSF56954 27 446 3.92E-97 T 06-07-2017 LFZ55_RS03320 de4325d7b19d598b6d428aeb9e6d28cb 493 Pfam PF02321 Outer membrane efflux protein 29 211 4.0E-26 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS03320 de4325d7b19d598b6d428aeb9e6d28cb 493 Pfam PF02321 Outer membrane efflux protein 234 428 4.8E-34 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 SUPERFAMILY SSF56784 2 195 4.96E-42 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 5.4E-22 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 4 191 1.0E-75 T 06-07-2017 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 1.8E-59 T 06-07-2017 IPR010976 Beta-phosphoglucomutase hydrolase LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 Gene3D G3DSA:1.10.150.240 17 93 1.4E-28 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 Gene3D G3DSA:3.40.50.1000 1 16 6.2E-31 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 Gene3D G3DSA:3.40.50.1000 96 193 6.2E-31 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS11455 6467aecffd3bc708fdd85982421db930 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 190 6.8E-17 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 Pfam PF01578 Cytochrome C assembly protein 89 296 5.6E-53 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 3.8E-121 T 06-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 1.5E-289 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 3.2E-57 T 06-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS07980 1336bb5782f6a025d8ae8c057f326499 644 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-95 T 06-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LFZ55_RS11095 7ffd32cb912040edc42a5cd43d8e0373 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.1E-74 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 LFZ55_RS11095 7ffd32cb912040edc42a5cd43d8e0373 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.414 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 LFZ55_RS11095 7ffd32cb912040edc42a5cd43d8e0373 179 Pfam PF04279 Intracellular septation protein A 1 175 3.5E-72 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 LFZ55_RS24245 3a911f942d5614a7811836c7ac265b75 453 SUPERFAMILY SSF52540 257 406 2.17E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24245 3a911f942d5614a7811836c7ac265b75 453 SUPERFAMILY SSF52540 7 140 2.17E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24245 3a911f942d5614a7811836c7ac265b75 453 Pfam PF01935 Domain of unknown function DUF87 20 78 1.8E-6 T 06-07-2017 IPR002789 Helicase HerA, central domain LFZ55_RS24245 3a911f942d5614a7811836c7ac265b75 453 Gene3D G3DSA:3.40.50.300 26 108 1.2E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24245 3a911f942d5614a7811836c7ac265b75 453 Gene3D G3DSA:3.40.50.300 293 392 1.2E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16570 b9e32ad73d4710f6d9e25c8c5aa73540 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 4.9E-59 T 06-07-2017 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 Hamap MF_01060 Periplasmic trehalase [treA]. 2 541 84.641 T 06-07-2017 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 Pfam PF01204 Trehalase 62 539 2.7E-170 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 ProSitePatterns PS00928 Trehalase signature 2. 453 462 - T 06-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 ProSitePatterns PS00927 Trehalase signature 1. 156 169 - T 06-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 446 462 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 523 536 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 307 324 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 339 356 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 382 398 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 273 290 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 PRINTS PR00744 Glycosyl hydrolase family 37 signature 198 216 4.5E-48 T 06-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 LFZ55_RS10560 c058975a8f0368598792fee7aabcd30e 570 SUPERFAMILY SSF48208 46 546 2.11E-172 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS08825 00e0e68628b279576ec345a2fd7ea2cb 243 SUPERFAMILY SSF53448 2 236 3.58E-17 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08825 00e0e68628b279576ec345a2fd7ea2cb 243 PIRSF PIRSF028162 3 240 1.0E-64 T 06-07-2017 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted LFZ55_RS08825 00e0e68628b279576ec345a2fd7ea2cb 243 Gene3D G3DSA:3.90.550.10 2 236 1.4E-11 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS01390 4cefc50aff7e9efd7d8811f6754eecc0 123 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 1.2E-32 T 06-07-2017 IPR019635 Protein of unknown function DUF2500 LFZ55_RS11980 9f585affa38dab9f562dd37893305672 64 Pfam PF15284 Phage-encoded virulence factor 2 62 3.7E-9 T 06-07-2017 IPR029335 Phage-encoded virulence factor LFZ55_RS15555 fd54cf97672dff6a68f61075ddb06a61 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.332 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LFZ55_RS15555 fd54cf97672dff6a68f61075ddb06a61 150 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 1.8E-73 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LFZ55_RS15555 fd54cf97672dff6a68f61075ddb06a61 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 8.0E-62 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Gene3D G3DSA:2.40.30.10 10 105 1.4E-18 T 06-07-2017 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Gene3D G3DSA:3.40.50.80 106 225 2.0E-23 T 06-07-2017 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Gene3D G3DSA:3.10.20.30 226 321 1.7E-25 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 SUPERFAMILY SSF52343 95 220 5.89E-25 T 06-07-2017 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 SUPERFAMILY SSF54292 221 321 1.7E-24 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Pfam PF00970 Oxidoreductase FAD-binding domain 36 104 1.7E-7 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 2.1E-6 T 06-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 2.1E-6 T 06-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 2.1E-6 T 06-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 211 6.9E-8 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 7.1E-14 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LFZ55_RS15955 c4eed5d7c56ca3b685c71cfbce67ea6e 322 SUPERFAMILY SSF63380 9 105 5.45E-21 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LFZ55_RS07310 e50e88e07620aba96ee39a50b5f500e2 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 4.7E-45 T 06-07-2017 IPR005272 Conserved hypothetical protein CHP00743 LFZ55_RS07310 e50e88e07620aba96ee39a50b5f500e2 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 3.8E-38 T 06-07-2017 IPR005272 Conserved hypothetical protein CHP00743 LFZ55_RS07310 e50e88e07620aba96ee39a50b5f500e2 94 Gene3D G3DSA:3.30.70.860 23 94 1.9E-34 T 06-07-2017 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 1.6E-155 T 06-07-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Gene3D G3DSA:3.40.50.2030 234 379 4.3E-65 T 06-07-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.313 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Gene3D G3DSA:3.40.50.2030 380 547 1.1E-67 T 06-07-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 2.1E-231 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Gene3D G3DSA:1.20.1270.20 159 232 1.5E-26 T 06-07-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 Gene3D G3DSA:1.20.1270.20 1 158 1.1E-37 T 06-07-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 PIRSF PIRSF000076 1 550 5.3E-239 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 LFZ55_RS15950 02e23c1b01619ab52389a3f0cb7e1b22 550 SUPERFAMILY SSF56821 1 548 1.96E-187 T 06-07-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SUPERFAMILY SSF47781 521 606 5.4E-17 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Gene3D G3DSA:1.10.150.20 555 609 2.4E-22 T 06-07-2017 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SMART SM00278 588 607 2.9 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SMART SM00278 556 575 1.1 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 1.2E-44 T 06-07-2017 IPR001162 UvrC family homology region LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 2.8E-236 T 06-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.7E-11 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.5E-8 T 06-07-2017 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SUPERFAMILY SSF82771 17 100 1.44E-24 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SMART SM00465 17 98 3.1E-23 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 SUPERFAMILY SSF46600 190 243 1.23E-13 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.143 T 06-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Pfam PF02151 UvrB/uvrC motif 205 237 2.1E-9 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Gene3D G3DSA:4.10.860.10 183 243 1.7E-21 T 06-07-2017 IPR001943 UVR domain GO:0005515 LFZ55_RS09690 d7f0948420d63e0bdc54ce790d6d05c7 610 Gene3D G3DSA:3.40.1440.10 17 97 2.8E-11 T 06-07-2017 IPR027299 GIY-YIG domain LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 63 433 1.3E-132 T 06-07-2017 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 PIRSF PIRSF014728 11 510 2.6E-248 T 06-07-2017 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 SUPERFAMILY SSF53474 115 183 4.35E-12 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 SUPERFAMILY SSF53474 217 273 4.35E-12 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 SUPERFAMILY SSF53474 326 390 4.35E-12 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS12440 f4973cb45f1d66fcf814252838eb7ab5 518 Gene3D G3DSA:3.40.50.1820 216 377 6.7E-11 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS17470 c727e7951ff018eeece167d97fc12823 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 175 3.0E-57 T 06-07-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 LFZ55_RS17470 c727e7951ff018eeece167d97fc12823 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 176 1.0E-52 T 06-07-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 Pfam PF00384 Molybdopterin oxidoreductase 107 162 3.2E-6 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 Gene3D G3DSA:2.20.25.90 37 108 6.5E-25 T 06-07-2017 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 Gene3D G3DSA:3.40.50.740 109 173 3.5E-16 T 06-07-2017 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 SUPERFAMILY SSF53706 35 195 5.76E-57 T 06-07-2017 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 SMART SM00926 43 104 4.9E-22 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS23275 3218dc43e584bd97f276bf660724b8a2 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 3.7E-19 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 3.9E-139 T 06-07-2017 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 Gene3D G3DSA:3.40.50.720 1 146 3.6E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 7.0E-51 T 06-07-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 06-07-2017 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.9E-46 T 06-07-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 Gene3D G3DSA:3.90.110.10 147 311 2.9E-62 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.514 T 06-07-2017 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 SUPERFAMILY SSF51735 1 145 1.2E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 PIRSF PIRSF000102 1 310 2.1E-59 T 06-07-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LFZ55_RS02460 462862c1d40ca21faa6a5d0220e2b0e1 312 SUPERFAMILY SSF56327 146 310 9.73E-41 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LFZ55_RS01145 7311978c996016cc6a6b498b11e2e82d 255 Gene3D G3DSA:3.20.20.450 32 251 1.2E-25 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01145 7311978c996016cc6a6b498b11e2e82d 255 SUPERFAMILY SSF141868 25 252 4.58E-31 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01145 7311978c996016cc6a6b498b11e2e82d 255 SMART SM00052 4 247 1.3E-37 T 06-07-2017 IPR001633 EAL domain LFZ55_RS01145 7311978c996016cc6a6b498b11e2e82d 255 Pfam PF00563 EAL domain 27 242 6.6E-28 T 06-07-2017 IPR001633 EAL domain LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 Pfam PF01311 Bacterial export proteins, family 1 15 246 2.0E-68 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 5.8E-34 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 5.8E-34 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.8E-34 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 5.8E-34 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS09520 db08318e62a33aba0c5240f4c16a9711 264 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 4.9E-80 T 06-07-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.222 T 06-07-2017 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 271 7.1E-134 T 06-07-2017 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 Gene3D G3DSA:3.40.225.10 1 269 1.4E-104 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 2.2E-34 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 SUPERFAMILY SSF53639 1 270 6.67E-73 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS23210 58357ad632686f497daa12a75009605b 275 SMART SM01007 11 239 1.8E-29 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 Pfam PF07729 FCD domain 97 225 3.9E-20 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 Gene3D G3DSA:1.20.120.530 94 234 3.5E-32 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 SUPERFAMILY SSF46785 3 77 1.13E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 SUPERFAMILY SSF48008 95 234 4.97E-28 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.0E-23 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.5E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.5E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 SMART SM00345 14 73 5.6E-27 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 Gene3D G3DSA:1.10.10.10 5 77 6.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20705 6883ddca3ed3902573d77c93fc92a5c1 257 SMART SM00895 97 226 4.5E-22 T 06-07-2017 IPR011711 GntR, C-terminal LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 Gene3D G3DSA:1.20.120.220 96 271 7.5E-59 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 Pfam PF00119 ATP synthase A chain 46 265 7.4E-56 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 1.1E-43 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.088 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 06-07-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 LFZ55_RS24060 b02a05515d42b10ede8f6f418c7097c6 271 SUPERFAMILY SSF81336 95 265 4.32E-50 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LFZ55_RS03335 2efbf2f07b85405a823a89dae59944b8 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 3.0E-26 T 06-07-2017 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 LFZ55_RS03335 2efbf2f07b85405a823a89dae59944b8 275 Gene3D G3DSA:1.20.250.10 42 273 1.8E-43 T 06-07-2017 IPR014739 Channel forming colicin, N-terminal domain GO:0016021|GO:0019835|GO:0050829 LFZ55_RS03335 2efbf2f07b85405a823a89dae59944b8 275 SUPERFAMILY SSF56300 16 268 4.41E-61 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS03335 2efbf2f07b85405a823a89dae59944b8 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 5.7E-20 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS03335 2efbf2f07b85405a823a89dae59944b8 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 41.79 T 06-07-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 LFZ55_RS10320 2e79761eac519466b66edbb4151ad38c 79 Pfam PF13996 YobH-like protein 2 71 1.6E-36 T 06-07-2017 IPR025611 YobH-like protein LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 Gene3D G3DSA:3.40.50.620 1 254 8.7E-67 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 SMART SM00893 22 215 1.7E-33 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 06-07-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 Hamap MF_01055 Protein FixA [fixA]. 1 257 53.891 T 06-07-2017 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 Pfam PF01012 Electron transfer flavoprotein domain 25 210 7.2E-35 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 SUPERFAMILY SSF52402 1 253 2.86E-57 T 06-07-2017 LFZ55_RS20000 873d5ca1caab0f4ec2bee20d28e1a1bc 257 PIRSF PIRSF000090 1 256 1.0E-64 T 06-07-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 LFZ55_RS09025 4d736a48c73e5cdc3456ba435e342e34 125 Pfam PF02288 Dehydratase medium subunit 8 111 3.5E-29 T 06-07-2017 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor LFZ55_RS09025 4d736a48c73e5cdc3456ba435e342e34 125 SUPERFAMILY SSF52968 3 115 1.57E-37 T 06-07-2017 IPR010254 B12-dependent dehydratases, beta subunit LFZ55_RS09025 4d736a48c73e5cdc3456ba435e342e34 125 PIRSF PIRSF011503 1 114 2.4E-41 T 06-07-2017 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit LFZ55_RS09025 4d736a48c73e5cdc3456ba435e342e34 125 Gene3D G3DSA:3.40.50.10150 4 114 3.6E-38 T 06-07-2017 IPR010254 B12-dependent dehydratases, beta subunit LFZ55_RS18060 23b8ba38554eccfd38840079eb1dcffe 148 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 141 1.6E-28 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS18060 23b8ba38554eccfd38840079eb1dcffe 148 Pfam PF04754 Putative transposase, YhgA-like 7 148 8.9E-65 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS07045 485ce4cf431099cf6c0e685ce64b3d16 238 Gene3D G3DSA:3.40.50.880 2 230 2.3E-48 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS07045 485ce4cf431099cf6c0e685ce64b3d16 238 SUPERFAMILY SSF52317 2 215 8.14E-34 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS07045 485ce4cf431099cf6c0e685ce64b3d16 238 Pfam PF00117 Glutamine amidotransferase class-I 42 185 7.9E-13 T 06-07-2017 IPR017926 Glutamine amidotransferase LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 1.5E-68 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 1.1E-182 T 06-07-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 5.7E-37 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 5.7E-37 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 5.7E-37 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 5.7E-37 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07685 fc71b8ae5007d008e44db047c38e129b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 5.7E-37 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS00620 75deced427b2a573ee7b936b341f8c71 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.8E-67 T 06-07-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 LFZ55_RS00620 75deced427b2a573ee7b936b341f8c71 425 SUPERFAMILY SSF53756 57 420 8.97E-20 T 06-07-2017 LFZ55_RS00620 75deced427b2a573ee7b936b341f8c71 425 Pfam PF00534 Glycosyl transferases group 1 235 398 5.5E-12 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 SMART SM00729 52 272 1.3E-57 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 Gene3D G3DSA:3.80.30.20 53 278 1.8E-32 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 7.8E-236 T 06-07-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 SUPERFAMILY SSF102114 6 444 2.35E-147 T 06-07-2017 LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 Gene3D G3DSA:1.10.10.10 406 441 6.3E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 Pfam PF06969 HemN C-terminal domain 363 431 7.0E-10 T 06-07-2017 IPR010723 HemN, C-terminal LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 PIRSF PIRSF000167 3 454 4.0E-181 T 06-07-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 LFZ55_RS23430 2109ef382df499c8d5eed2a5ec655c0c 457 Pfam PF04055 Radical SAM superfamily 57 226 3.1E-18 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 Pfam PF12833 Helix-turn-helix domain 247 324 1.3E-22 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 319 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 SUPERFAMILY SSF46689 224 275 4.39E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 Gene3D G3DSA:1.10.10.60 279 325 1.4E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 SUPERFAMILY SSF46689 277 325 6.09E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 SMART SM00342 241 323 2.2E-30 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS18620 5d22db151a9eb50341761722870cc51e 334 Gene3D G3DSA:1.10.10.60 223 278 3.4E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS02980 c246ef17b701115562e8f554b580cc94 412 Pfam PF00419 Fimbrial protein 235 411 2.5E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS02980 c246ef17b701115562e8f554b580cc94 412 Gene3D G3DSA:2.60.40.1090 245 411 5.9E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS02980 c246ef17b701115562e8f554b580cc94 412 SUPERFAMILY SSF49401 311 411 1.09E-17 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS02980 c246ef17b701115562e8f554b580cc94 412 SUPERFAMILY SSF49401 242 284 1.09E-17 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS04610 89bef54da8e815452d5c0f561df52d62 109 Gene3D G3DSA:1.20.1440.40 1 104 1.5E-41 T 06-07-2017 IPR023376 YqcC-like domain LFZ55_RS04610 89bef54da8e815452d5c0f561df52d62 109 PIRSF PIRSF006257 1 108 4.2E-39 T 06-07-2017 IPR007384 Protein of unknown function UCP006257 LFZ55_RS04610 89bef54da8e815452d5c0f561df52d62 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 1.2E-32 T 06-07-2017 IPR023376 YqcC-like domain LFZ55_RS04610 89bef54da8e815452d5c0f561df52d62 109 SUPERFAMILY SSF158452 1 107 7.72E-37 T 06-07-2017 IPR023376 YqcC-like domain LFZ55_RS17600 eba57d1f40fb0033be676e402c15e9f4 414 Gene3D G3DSA:1.20.1250.20 239 403 6.1E-11 T 06-07-2017 LFZ55_RS17600 eba57d1f40fb0033be676e402c15e9f4 414 SUPERFAMILY SSF103473 16 403 6.8E-39 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS17600 eba57d1f40fb0033be676e402c15e9f4 414 Pfam PF05977 Transmembrane secretion effector 16 397 5.4E-19 T 06-07-2017 IPR010290 Transmembrane secretion effector LFZ55_RS17600 eba57d1f40fb0033be676e402c15e9f4 414 Gene3D G3DSA:1.20.1250.20 16 206 5.8E-22 T 06-07-2017 LFZ55_RS17600 eba57d1f40fb0033be676e402c15e9f4 414 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 414 46.48 T 06-07-2017 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 LFZ55_RS10745 1825bd93dc24ffb9c92044d625292afa 457 Gene3D G3DSA:3.40.50.300 205 389 6.9E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10745 1825bd93dc24ffb9c92044d625292afa 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 251 374 3.2E-25 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS10745 1825bd93dc24ffb9c92044d625292afa 457 SUPERFAMILY SSF52540 205 443 2.08E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10745 1825bd93dc24ffb9c92044d625292afa 457 SMART SM00382 246 378 6.9E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 Gene3D G3DSA:3.20.20.70 28 132 2.7E-8 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 PIRSF PIRSF004640 1 364 1.9E-144 T 06-07-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 SUPERFAMILY SSF51717 16 208 3.77E-11 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 Pfam PF04551 GcpE protein 13 354 6.0E-131 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 353 2.0E-126 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 SUPERFAMILY SSF56014 265 354 8.07E-12 T 06-07-2017 LFZ55_RS18820 0fcbf821e2602ea9427babd924f48d21 365 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.149 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 LFZ55_RS19985 d3e7b08897a5cd612bc5155dab70e430 95 PIRSF PIRSF036548 1 95 8.3E-38 T 06-07-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 LFZ55_RS19985 d3e7b08897a5cd612bc5155dab70e430 95 SUPERFAMILY SSF54862 40 89 6.58E-8 T 06-07-2017 LFZ55_RS19985 d3e7b08897a5cd612bc5155dab70e430 95 Gene3D G3DSA:3.30.70.20 40 69 4.1E-5 T 06-07-2017 LFZ55_RS15020 8dd945f6dcf7f4e0b5870174ac4689c9 170 SUPERFAMILY SSF50475 9 162 1.13E-45 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS15020 8dd945f6dcf7f4e0b5870174ac4689c9 170 Gene3D G3DSA:2.30.110.10 7 160 3.0E-48 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS15020 8dd945f6dcf7f4e0b5870174ac4689c9 170 Pfam PF01613 Flavin reductase like domain 14 162 5.2E-26 T 06-07-2017 IPR002563 Flavin reductase like domain GO:0010181 LFZ55_RS15020 8dd945f6dcf7f4e0b5870174ac4689c9 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 10 162 7.0E-78 T 06-07-2017 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 LFZ55_RS15020 8dd945f6dcf7f4e0b5870174ac4689c9 170 SMART SM00903 14 161 2.3E-44 T 06-07-2017 IPR002563 Flavin reductase like domain GO:0010181 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 2.2E-24 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 SUPERFAMILY SSF56762 193 537 8.5E-110 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 2.4E-13 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 4.0E-24 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 2.0E-35 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 469 537 6.6E-11 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 SUPERFAMILY SSF143243 9 194 4.32E-46 T 06-07-2017 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 Gene3D G3DSA:1.10.645.10 166 536 1.5E-87 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05165 016f55cf9b96a54268acbae250bafe6b 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 06-07-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.426 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 PIRSF PIRSF004916 1 109 5.7E-57 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 SUPERFAMILY SSF102816 3 109 1.44E-50 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 Gene3D G3DSA:3.10.450.140 9 109 5.1E-51 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 1.4E-46 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS11065 bfdecdd175a42572aa4318ea61332ac8 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 1.0E-53 T 06-07-2017 IPR007376 dsDNA mimic, putative LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 06-07-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 309 1.2E-45 T 06-07-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 4.5E-28 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 4.5E-28 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 4.5E-28 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 4.5E-28 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 4.5E-28 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 3.4E-28 T 06-07-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 2.5E-110 T 06-07-2017 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 Gene3D G3DSA:3.40.50.150 102 311 7.4E-58 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 421 470 2.1E-10 T 06-07-2017 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 SUPERFAMILY SSF53335 7 311 4.55E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS10270 47f7f95790631628fada0b91af05eea1 479 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 475 64.18 T 06-07-2017 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LFZ55_RS13390 a6d30daf37474e37f4549dcc2200cfb0 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 46.523 T 06-07-2017 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 LFZ55_RS13390 a6d30daf37474e37f4549dcc2200cfb0 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 1.1E-45 T 06-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 LFZ55_RS13390 a6d30daf37474e37f4549dcc2200cfb0 136 SUPERFAMILY SSF54637 1 133 1.46E-28 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS13390 a6d30daf37474e37f4549dcc2200cfb0 136 Gene3D G3DSA:3.10.129.10 1 136 3.0E-50 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS13390 a6d30daf37474e37f4549dcc2200cfb0 136 Pfam PF03061 Thioesterase superfamily 50 127 6.3E-15 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 LFZ55_RS21530 787b10eeea848c080f3106761a106ace 128 SUPERFAMILY SSF46785 14 119 1.84E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21530 787b10eeea848c080f3106761a106ace 128 Pfam PF01638 HxlR-like helix-turn-helix 29 116 7.6E-32 T 06-07-2017 IPR002577 Helix-turn-helix, HxlR type LFZ55_RS21530 787b10eeea848c080f3106761a106ace 128 Gene3D G3DSA:1.10.10.10 4 125 1.4E-45 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 Gene3D G3DSA:2.30.40.10 287 377 3.7E-8 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 Pfam PF07969 Amidohydrolase family 284 378 1.6E-10 T 06-07-2017 IPR013108 Amidohydrolase 3 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 SUPERFAMILY SSF51556 50 345 5.44E-21 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 SUPERFAMILY SSF51338 345 377 3.12E-10 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 SUPERFAMILY SSF51338 1 50 3.12E-10 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 PIRSF PIRSF038971 1 378 7.6E-154 T 06-07-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 Gene3D G3DSA:2.30.40.10 1 91 2.6E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS22210 89614d904b7d6a331d8b12a523c26028 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 9.3E-161 T 06-07-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 32 251 31.349 T 06-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 PIRSF PIRSF026671 4 253 2.3E-71 T 06-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 Pfam PF01427 D-ala-D-ala dipeptidase 32 158 2.1E-21 T 06-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 Pfam PF01427 D-ala-D-ala dipeptidase 185 252 2.4E-14 T 06-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 SUPERFAMILY SSF55166 30 250 2.47E-62 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS12005 6953509b0d0c913082f2e05d2b6429da 253 Gene3D G3DSA:3.30.1380.10 31 252 2.8E-72 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS18475 8f09ea0325b16f328dc2dd795c2c9561 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 1.7E-128 T 06-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 LFZ55_RS18475 8f09ea0325b16f328dc2dd795c2c9561 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 43.413 T 06-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 1.6E-100 T 06-07-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 SUPERFAMILY SSF89733 1 332 4.84E-92 T 06-07-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Gene3D G3DSA:3.30.60.50 181 219 2.1E-22 T 06-07-2017 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Gene3D G3DSA:3.30.1370.60 74 170 2.2E-57 T 06-07-2017 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Gene3D G3DSA:3.30.1370.60 220 269 2.2E-57 T 06-07-2017 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 84.007 T 06-07-2017 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.13+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 LFZ55_RS00865 cbd97819ab043a9504c643bb06c47c50 332 Gene3D G3DSA:1.10.1530.10 1 73 3.8E-27 T 06-07-2017 LFZ55_RS10100 fe8cdaba917d59a64a56d12de238d8c1 85 SUPERFAMILY SSF53098 2 72 9.56E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS10100 fe8cdaba917d59a64a56d12de238d8c1 85 Pfam PF13683 Integrase core domain 2 63 3.4E-28 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS10100 fe8cdaba917d59a64a56d12de238d8c1 85 Gene3D G3DSA:3.30.420.10 2 63 3.2E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 PIRSF PIRSF001455 10 361 1.2E-105 T 06-07-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 SUPERFAMILY SSF56796 4 356 1.57E-117 T 06-07-2017 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 2.8E-122 T 06-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 Pfam PF01761 3-dehydroquinate synthase 67 325 4.0E-109 T 06-07-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 Gene3D G3DSA:1.20.1090.10 173 356 2.0E-67 T 06-07-2017 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 Gene3D G3DSA:3.40.50.1970 2 172 1.4E-67 T 06-07-2017 LFZ55_RS01760 4a38d9fbc412a0460b705b295e61635e 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.345 T 06-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 LFZ55_RS13035 261f35642b3969feb73840e65d3d0c96 365 Gene3D G3DSA:3.20.20.70 4 364 4.9E-138 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS13035 261f35642b3969feb73840e65d3d0c96 365 SUPERFAMILY SSF51395 4 364 6.11E-126 T 06-07-2017 LFZ55_RS13035 261f35642b3969feb73840e65d3d0c96 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 3.4E-94 T 06-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LFZ55_RS03820 d9a6e38dc7be23d1467be7460d0ea369 188 Pfam PF02325 YGGT family 104 167 3.2E-16 T 06-07-2017 IPR003425 CCB3/YggT GO:0016020 LFZ55_RS03820 d9a6e38dc7be23d1467be7460d0ea369 188 Pfam PF02325 YGGT family 10 78 1.9E-22 T 06-07-2017 IPR003425 CCB3/YggT GO:0016020 LFZ55_RS11040 41defa1a8505d92a10a46211f67ecada 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.5E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11040 41defa1a8505d92a10a46211f67ecada 306 SUPERFAMILY SSF161098 89 291 1.42E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11040 41defa1a8505d92a10a46211f67ecada 306 Gene3D G3DSA:1.10.3720.10 88 302 5.8E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16385 7d85e73ef69f0b453d0ec5a75e89b423 249 Gene3D G3DSA:3.40.50.720 3 249 5.4E-79 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16385 7d85e73ef69f0b453d0ec5a75e89b423 249 Pfam PF00899 ThiF family 12 244 5.0E-64 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS16385 7d85e73ef69f0b453d0ec5a75e89b423 249 SUPERFAMILY SSF69572 3 248 7.19E-87 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LFZ55_RS16385 7d85e73ef69f0b453d0ec5a75e89b423 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 6.2E-132 T 06-07-2017 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 SMART SM00471 26 151 6.4E-7 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 Gene3D G3DSA:1.10.3210.10 2 194 1.2E-52 T 06-07-2017 IPR006674 HD domain LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 SUPERFAMILY SSF109604 2 193 7.14E-45 T 06-07-2017 LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 Pfam PF13023 HD domain 11 160 5.1E-15 T 06-07-2017 IPR006674 HD domain LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 167 1.0E-44 T 06-07-2017 LFZ55_RS07605 70aee0c7954f3073b90f87a8f8d9238d 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.896 T 06-07-2017 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 LFZ55_RS18435 44a65144129d6d3f6bf3f5b6cb6efa30 456 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS18435 44a65144129d6d3f6bf3f5b6cb6efa30 456 PIRSF PIRSF006060 1 453 8.0E-78 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS18435 44a65144129d6d3f6bf3f5b6cb6efa30 456 Pfam PF00324 Amino acid permease 15 451 2.7E-109 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS06095 8c34083d66392ec43fff5897199f2c84 443 PIRSF PIRSF006060 2 442 5.8E-51 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS06095 8c34083d66392ec43fff5897199f2c84 443 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 4 437 1.7E-139 T 06-07-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 LFZ55_RS06095 8c34083d66392ec43fff5897199f2c84 443 Pfam PF13520 Amino acid permease 7 416 2.9E-39 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS02540 d55659bfa7210663cef4e6abfe824e61 426 Gene3D G3DSA:3.20.20.140 65 366 4.2E-126 T 06-07-2017 LFZ55_RS02540 d55659bfa7210663cef4e6abfe824e61 426 SUPERFAMILY SSF51556 56 375 2.88E-107 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS02540 d55659bfa7210663cef4e6abfe824e61 426 Gene3D G3DSA:2.30.40.10 20 64 1.0E-6 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS02540 d55659bfa7210663cef4e6abfe824e61 426 Pfam PF07969 Amidohydrolase family 45 404 5.7E-60 T 06-07-2017 IPR013108 Amidohydrolase 3 LFZ55_RS02540 d55659bfa7210663cef4e6abfe824e61 426 SUPERFAMILY SSF51338 6 64 3.7E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LFZ55_RS12355 156966962ac4ac3336bab87d246d9f04 163 Gene3D G3DSA:2.30.110.20 1 161 1.8E-33 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS12355 156966962ac4ac3336bab87d246d9f04 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 8.3E-36 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS12355 156966962ac4ac3336bab87d246d9f04 163 SUPERFAMILY SSF141452 2 161 9.68E-43 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS12355 156966962ac4ac3336bab87d246d9f04 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 6.8E-47 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS20530 84298469d0c115ad77112a46029ed89c 351 SMART SM00267 178 348 1.5E-55 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS20530 84298469d0c115ad77112a46029ed89c 351 Gene3D G3DSA:3.30.70.270 192 348 1.3E-48 T 06-07-2017 LFZ55_RS20530 84298469d0c115ad77112a46029ed89c 351 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 344 3.4E-46 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS20530 84298469d0c115ad77112a46029ed89c 351 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 348 5.9E-47 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS20530 84298469d0c115ad77112a46029ed89c 351 SUPERFAMILY SSF55073 194 347 9.42E-44 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 7.9E-153 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 4.6E-105 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 3.5E-160 T 06-07-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 LFZ55_RS02825 437d36885c827584240c58bee2932e53 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 06-07-2017 IPR013061 Tryptophan/tryrosine permease, conserved site LFZ55_RS11315 92e233335f0345710ccdbb9d5dd2719b 268 SUPERFAMILY SSF52540 5 251 5.22E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11315 92e233335f0345710ccdbb9d5dd2719b 268 Pfam PF00005 ABC transporter 31 178 7.9E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS11315 92e233335f0345710ccdbb9d5dd2719b 268 SMART SM00382 39 228 2.7E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11315 92e233335f0345710ccdbb9d5dd2719b 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS11315 92e233335f0345710ccdbb9d5dd2719b 268 Gene3D G3DSA:3.40.50.300 3 251 3.2E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 06-07-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.186 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 Gene3D G3DSA:3.40.50.1260 5 174 8.0E-65 T 06-07-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 SUPERFAMILY SSF53748 3 383 4.95E-145 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 PIRSF PIRSF000724 1 387 3.0E-134 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 Pfam PF00162 Phosphoglycerate kinase 6 373 5.4E-139 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS03980 47d43d1542b32ee812aa82de7e6563c0 387 Gene3D G3DSA:3.40.50.1270 175 371 4.4E-81 T 06-07-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LFZ55_RS05160 8e49e62aeb153f8a68c61b52c73c3d2e 307 Pfam PF00146 NADH dehydrogenase 9 302 5.5E-49 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05160 8e49e62aeb153f8a68c61b52c73c3d2e 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS05160 8e49e62aeb153f8a68c61b52c73c3d2e 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 32 46 5.3E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 46 62 5.3E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 62 74 5.3E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 ProSitePatterns PS00622 LuxR-type HTH domain signature. 46 73 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 SMART SM00421 29 86 9.5E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 Pfam PF00196 Bacterial regulatory proteins, luxR family 31 82 5.9E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 Gene3D G3DSA:1.10.10.10 27 93 4.3E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24675 20775e167aa5deb118686891a30591c4 112 SUPERFAMILY SSF46894 23 91 4.42E-15 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20010 49a1e09e55ca795989c6fbdf2c244332 505 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 06-07-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 LFZ55_RS20010 49a1e09e55ca795989c6fbdf2c244332 505 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 499 3.0E-129 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LFZ55_RS20010 49a1e09e55ca795989c6fbdf2c244332 505 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 499 2.7E-166 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LFZ55_RS20010 49a1e09e55ca795989c6fbdf2c244332 505 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 60.878 T 06-07-2017 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 LFZ55_RS19110 6df75c831a3797d385039e3e14418556 266 SUPERFAMILY SSF56219 44 260 3.14E-26 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS19110 6df75c831a3797d385039e3e14418556 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 54.404 T 06-07-2017 IPR022958 Uncharacterised protein family UPF0294 LFZ55_RS19110 6df75c831a3797d385039e3e14418556 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 53 252 7.1E-9 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS19110 6df75c831a3797d385039e3e14418556 266 Gene3D G3DSA:3.60.10.10 41 226 1.8E-6 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS12075 e5a9ba4c2f1a6d81f36c89cfb581ca3b 706 Pfam PF00593 TonB dependent receptor 454 701 2.2E-37 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS12075 e5a9ba4c2f1a6d81f36c89cfb581ca3b 706 SUPERFAMILY SSF56935 25 702 4.88E-125 T 06-07-2017 LFZ55_RS12075 e5a9ba4c2f1a6d81f36c89cfb581ca3b 706 Gene3D G3DSA:2.40.170.20 158 701 1.3E-108 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS12075 e5a9ba4c2f1a6d81f36c89cfb581ca3b 706 Gene3D G3DSA:2.170.130.10 33 157 9.4E-31 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS12075 e5a9ba4c2f1a6d81f36c89cfb581ca3b 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 157 5.2E-23 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS18565 67f96549b4377337847e23a074646768 207 Gene3D G3DSA:2.60.120.10 18 125 6.3E-7 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS18565 67f96549b4377337847e23a074646768 207 SUPERFAMILY SSF51206 23 123 5.76E-11 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like LFZ55_RS18565 67f96549b4377337847e23a074646768 207 Gene3D G3DSA:1.10.10.10 138 202 8.1E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18565 67f96549b4377337847e23a074646768 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 205 7.9E-29 T 06-07-2017 LFZ55_RS02975 232a00010156a935b97cce1ca5b7bfe2 812 Pfam PF13953 PapC C-terminal domain 731 792 3.9E-18 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS02975 232a00010156a935b97cce1ca5b7bfe2 812 Pfam PF00577 Outer membrane usher protein 166 720 4.2E-162 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS02975 232a00010156a935b97cce1ca5b7bfe2 812 Pfam PF13954 PapC N-terminal domain 6 151 9.1E-42 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS02975 232a00010156a935b97cce1ca5b7bfe2 812 SUPERFAMILY SSF141729 4 128 9.42E-30 T 06-07-2017 LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SMART SM00052 402 646 9.1E-116 T 06-07-2017 IPR001633 EAL domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SMART SM00091 108 174 4.2E-6 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 111 230 2.0E-15 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SMART SM00267 223 392 2.3E-67 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Gene3D G3DSA:3.20.20.450 406 654 4.5E-86 T 06-07-2017 IPR001633 EAL domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SUPERFAMILY SSF55785 121 231 2.58E-16 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Gene3D G3DSA:3.30.450.20 106 215 9.8E-19 T 06-07-2017 LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Pfam PF13426 PAS domain 121 222 5.6E-9 T 06-07-2017 IPR000014 PAS domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 387 2.6E-46 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SUPERFAMILY SSF55073 240 394 5.57E-45 T 06-07-2017 IPR029787 Nucleotide cyclase LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Gene3D G3DSA:3.30.70.270 236 400 6.6E-53 T 06-07-2017 LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 391 9.4E-36 T 06-07-2017 IPR000160 GGDEF domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 SUPERFAMILY SSF141868 409 656 3.4E-81 T 06-07-2017 IPR001633 EAL domain LFZ55_RS11280 1598d307da68ad578490bf337718e35d 660 Pfam PF00563 EAL domain 409 641 1.0E-63 T 06-07-2017 IPR001633 EAL domain LFZ55_RS07000 599071b9dd5f45350d5b28713a59adc3 149 Pfam PF11143 Protein of unknown function (DUF2919) 6 144 2.7E-47 T 06-07-2017 IPR021318 Protein of unknown function DUF2919 LFZ55_RS06100 9b402ef61510df464390a9e18699c85b 514 SMART SM00862 24 100 4.7E-16 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS06100 9b402ef61510df464390a9e18699c85b 514 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 4.7E-17 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS06100 9b402ef61510df464390a9e18699c85b 514 Gene3D G3DSA:1.10.10.10 2 103 2.2E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06100 9b402ef61510df464390a9e18699c85b 514 Gene3D G3DSA:1.25.40.10 430 486 5.1E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS06100 9b402ef61510df464390a9e18699c85b 514 SUPERFAMILY SSF46894 2 102 9.07E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS14195 d9c1a791e9057daf9dcd51b332030ef0 85 Gene3D G3DSA:3.30.1660.10 18 85 2.9E-26 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS14195 d9c1a791e9057daf9dcd51b332030ef0 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.1E-19 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS14195 d9c1a791e9057daf9dcd51b332030ef0 85 SUPERFAMILY SSF159871 3 85 3.01E-24 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 PRINTS PR01388 Cytolethal distending toxin B signature 65 85 7.7E-34 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 PRINTS PR01388 Cytolethal distending toxin B signature 144 163 7.7E-34 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 PRINTS PR01388 Cytolethal distending toxin B signature 24 45 7.7E-34 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 PRINTS PR01388 Cytolethal distending toxin B signature 189 204 7.7E-34 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 Gene3D G3DSA:3.60.10.10 13 265 1.4E-96 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 PIRSF PIRSF018539 5 268 1.0E-125 T 06-07-2017 IPR003539 Cytolethal distending toxin B GO:0009405 LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 SUPERFAMILY SSF56219 25 264 5.89E-25 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS10185 259b36a9302df4d6de1e11e795734103 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 30 211 1.0E-8 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS10695 05a089366712cbd8b700e9ce7b2d4f89 267 Gene3D G3DSA:3.40.50.1820 8 126 2.0E-32 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10695 05a089366712cbd8b700e9ce7b2d4f89 267 Gene3D G3DSA:3.40.50.1820 180 245 2.0E-32 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS10695 05a089366712cbd8b700e9ce7b2d4f89 267 Pfam PF00975 Thioesterase domain 20 249 6.5E-67 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 LFZ55_RS10695 05a089366712cbd8b700e9ce7b2d4f89 267 SMART SM00824 Thioesterase 23 248 0.0098 T 06-07-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 LFZ55_RS10695 05a089366712cbd8b700e9ce7b2d4f89 267 SUPERFAMILY SSF53474 9 246 3.07E-46 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS12830 5da055efbb86cc7af3cee80c6d018738 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 21 111 5.0E-47 T 06-07-2017 IPR009707 Membrane protein GlpM/YdgC LFZ55_RS12830 5da055efbb86cc7af3cee80c6d018738 111 Pfam PF06942 GlpM protein 5 111 3.2E-52 T 06-07-2017 IPR009707 Membrane protein GlpM/YdgC LFZ55_RS09350 9543646c325592b92dcb02d62a19b6db 238 Gene3D G3DSA:3.40.50.1820 33 236 3.4E-13 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS09350 9543646c325592b92dcb02d62a19b6db 238 SUPERFAMILY SSF53474 23 236 7.54E-17 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS08330 2b1c4e93b82da3afb97de6d860a57c1f 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 1.2E-47 T 06-07-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LFZ55_RS18275 900f0d7c120b46abed7cab96183bd192 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 1.5E-92 T 06-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 LFZ55_RS18275 900f0d7c120b46abed7cab96183bd192 296 SUPERFAMILY SSF82866 15 125 8.11E-5 T 06-07-2017 LFZ55_RS18275 900f0d7c120b46abed7cab96183bd192 296 Pfam PF01040 UbiA prenyltransferase family 19 265 1.1E-60 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LFZ55_RS18275 900f0d7c120b46abed7cab96183bd192 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.097 T 06-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 LFZ55_RS18275 900f0d7c120b46abed7cab96183bd192 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 06-07-2017 IPR030470 UbiA prenyltransferase conserved site LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PIRSF PIRSF000114 1 336 4.8E-101 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 SUPERFAMILY SSF48179 184 335 1.02E-56 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 1.7E-51 T 06-07-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 Gene3D G3DSA:3.40.50.720 4 187 7.0E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 7.4E-52 T 06-07-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 Gene3D G3DSA:1.10.1040.10 188 330 1.3E-57 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.305 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 SUPERFAMILY SSF51735 8 182 6.34E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS00745 614a323b6355ed68dbb4b7d1cbe868c2 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 4.1E-42 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LFZ55_RS03595 99bf227805f5e8e5e76d8e98edf99449 292 Pfam PF00795 Carbon-nitrogen hydrolase 18 260 2.5E-19 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS03595 99bf227805f5e8e5e76d8e98edf99449 292 SUPERFAMILY SSF56317 1 268 3.14E-48 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS03595 99bf227805f5e8e5e76d8e98edf99449 292 Gene3D G3DSA:3.60.110.10 1 279 1.3E-48 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LFZ55_RS00225 3e689f291ab0d7cf613c50f24c255eab 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 51 186 3.2E-39 T 06-07-2017 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 LFZ55_RS00225 3e689f291ab0d7cf613c50f24c255eab 394 Gene3D G3DSA:1.20.1250.20 202 381 0.001 T 06-07-2017 LFZ55_RS00225 3e689f291ab0d7cf613c50f24c255eab 394 Gene3D G3DSA:1.20.1250.20 8 188 1.1E-29 T 06-07-2017 LFZ55_RS00225 3e689f291ab0d7cf613c50f24c255eab 394 SUPERFAMILY SSF103473 6 387 9.02E-55 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00225 3e689f291ab0d7cf613c50f24c255eab 394 Pfam PF07690 Major Facilitator Superfamily 14 349 9.8E-39 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 06-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.023 T 06-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 SMART SM01228 546 617 9.2E-45 T 06-07-2017 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 Pfam PF13932 GidA associated domain 403 616 5.0E-73 T 06-07-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 06-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 SUPERFAMILY SSF51905 97 261 7.06E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 SUPERFAMILY SSF51905 7 66 7.06E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.7E-170 T 06-07-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 Gene3D G3DSA:3.50.50.60 7 233 1.1E-56 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS24045 65bbdc541e6192377580cc243264e4db 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 06-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 SUPERFAMILY SSF52540 72 152 1.04E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 SUPERFAMILY SSF52540 188 372 1.04E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 4.6E-100 T 06-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 4.8E-23 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:3.40.50.300 286 376 6.2E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:3.30.1360.120 1 121 2.7E-42 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:3.40.50.300 211 246 5.9E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 1.4E-24 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.8E-34 T 06-07-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.148 T 06-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Pfam PF12631 MnmE helical domain 123 451 2.1E-60 T 06-07-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 SUPERFAMILY SSF116878 379 454 4.45E-51 T 06-07-2017 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 SUPERFAMILY SSF116878 121 220 4.45E-51 T 06-07-2017 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:1.20.120.430 122 182 1.9E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:1.20.120.430 247 271 1.9E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LFZ55_RS24165 05c50f5d35240ff6ac996ff3376868c6 454 Gene3D G3DSA:1.20.120.430 384 454 1.9E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LFZ55_RS06335 424ab9193eea6603b6a946da21f2e86c 240 Pfam PF05063 MT-A70 125 200 7.1E-7 T 06-07-2017 IPR007757 MT-A70-like GO:0006139|GO:0008168 LFZ55_RS06335 424ab9193eea6603b6a946da21f2e86c 240 Pfam PF05063 MT-A70 4 88 1.2E-8 T 06-07-2017 IPR007757 MT-A70-like GO:0006139|GO:0008168 LFZ55_RS06580 424ab9193eea6603b6a946da21f2e86c 240 Pfam PF05063 MT-A70 125 200 7.1E-7 T 06-07-2017 IPR007757 MT-A70-like GO:0006139|GO:0008168 LFZ55_RS06580 424ab9193eea6603b6a946da21f2e86c 240 Pfam PF05063 MT-A70 4 88 1.2E-8 T 06-07-2017 IPR007757 MT-A70-like GO:0006139|GO:0008168 LFZ55_RS20755 84f3114a30ae3b85bb9049bc4f7f7ff5 145 SUPERFAMILY SSF53062 1 127 8.5E-36 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS20755 84f3114a30ae3b85bb9049bc4f7f7ff5 145 Gene3D G3DSA:3.40.50.510 1 125 6.6E-40 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS20755 84f3114a30ae3b85bb9049bc4f7f7ff5 145 Pfam PF03610 PTS system fructose IIA component 3 114 3.9E-30 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS14055 a6385ff79f2e532b427d0ab246d1d0f3 96 Pfam PF06291 Bor protein 1 95 1.2E-45 T 06-07-2017 IPR010438 Bor GO:0009279 LFZ55_RS14055 a6385ff79f2e532b427d0ab246d1d0f3 96 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 95 3.0E-36 T 06-07-2017 IPR010438 Bor GO:0009279 LFZ55_RS09660 231624048d080525e751a7500eba2064 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.7E-34 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS09660 231624048d080525e751a7500eba2064 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 3.9E-25 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS09660 231624048d080525e751a7500eba2064 222 SUPERFAMILY SSF161098 13 200 2.75E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS09660 231624048d080525e751a7500eba2064 222 Gene3D G3DSA:1.10.3720.10 12 216 8.7E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.9E-55 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 06-07-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.4E-60 T 06-07-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 Gene3D G3DSA:2.40.150.20 1 123 6.8E-56 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 SMART SM01374 1 123 3.9E-86 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LFZ55_RS02090 085432ff5f62d9b40e7465024b6fef37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.664 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LFZ55_RS13995 edba26d48b16eab989094f2d09b24e56 114 SUPERFAMILY SSF141488 30 107 7.85E-12 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor LFZ55_RS13995 edba26d48b16eab989094f2d09b24e56 114 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 105 3.0E-11 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 PIRSF PIRSF001394 30 548 1.2E-235 T 06-07-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 4.4E-63 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 Gene3D G3DSA:3.20.130.10 349 537 3.2E-76 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 SUPERFAMILY SSF117457 361 536 2.75E-62 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 77 325 1.5E-29 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 Pfam PF05683 Fumarase C-terminus 332 537 7.3E-94 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS12865 106fd995ba925141bcb0b4d00ae9a5b3 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.2E-84 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS12945 eb883c1f3f8d6bd4680716bc54be3283 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 199 3.1E-62 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LFZ55_RS12945 eb883c1f3f8d6bd4680716bc54be3283 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.54 T 06-07-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 LFZ55_RS12945 eb883c1f3f8d6bd4680716bc54be3283 230 PIRSF PIRSF006102 1 219 1.4E-79 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LFZ55_RS12945 eb883c1f3f8d6bd4680716bc54be3283 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 1.4E-81 T 06-07-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 LFZ55_RS21725 1806bd0d48508c56f95c76906d5ff9fb 102 Gene3D G3DSA:2.30.30.100 1 74 4.5E-38 T 06-07-2017 LFZ55_RS21725 1806bd0d48508c56f95c76906d5ff9fb 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 06-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LFZ55_RS21725 1806bd0d48508c56f95c76906d5ff9fb 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 06-07-2017 IPR010920 LSM domain LFZ55_RS21725 1806bd0d48508c56f95c76906d5ff9fb 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 06-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 Gene3D G3DSA:3.30.70.20 150 187 4.7E-9 T 06-07-2017 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 SUPERFAMILY SSF54862 38 325 7.53E-71 T 06-07-2017 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 Pfam PF13247 4Fe-4S dicluster domain 105 207 5.1E-23 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 Gene3D G3DSA:3.30.70.20 117 149 3.0E-12 T 06-07-2017 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 Gene3D G3DSA:3.30.70.20 38 116 9.9E-25 T 06-07-2017 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 Gene3D G3DSA:3.30.70.20 188 231 9.9E-25 T 06-07-2017 LFZ55_RS03490 8a678592ace4c089a4e496c02fcd28d8 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 1.1E-4 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LFZ55_RS12325 9cd28ef7e8caf4fb1d497d7f4479906e 360 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 321 5.1E-73 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS12325 9cd28ef7e8caf4fb1d497d7f4479906e 360 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 20 321 3.3E-75 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 SMART SM00387 249 356 2.5E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 Gene3D G3DSA:1.10.287.130 133 198 1.2E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 1.2E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 SMART SM00304 89 141 1.4E-4 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 Pfam PF00672 HAMP domain 70 137 1.4E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 354 1.4E-16 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 SUPERFAMILY SSF47384 126 199 3.14E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 6.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 6.2E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 SUPERFAMILY SSF55874 192 354 1.83E-27 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 SMART SM00388 142 202 8.0E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22140 8f0f76caeadaa190356ee93fc6001729 356 Gene3D G3DSA:3.30.565.10 220 353 5.7E-27 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS23125 3a4ec46bd037ff086e06786f91b4b141 490 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 490 4.4E-128 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS23125 3a4ec46bd037ff086e06786f91b4b141 490 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 484 4.4E-106 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS23125 3a4ec46bd037ff086e06786f91b4b141 490 PIRSF PIRSF002457 3 490 6.5E-127 T 06-07-2017 IPR030676 Citrate carrier CitT-related LFZ55_RS17650 fa2d92dbfa4ca5efbe04fdd732b11d18 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 92.576 T 06-07-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS17650 fa2d92dbfa4ca5efbe04fdd732b11d18 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 2.1E-83 T 06-07-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS17650 fa2d92dbfa4ca5efbe04fdd732b11d18 372 SUPERFAMILY SSF55931 4 369 1.83E-107 T 06-07-2017 LFZ55_RS17650 fa2d92dbfa4ca5efbe04fdd732b11d18 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 8.0E-113 T 06-07-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 LFZ55_RS04250 bd66a7b39395d2629f5df76343c9fbe4 195 Gene3D G3DSA:2.60.40.1090 35 194 9.6E-41 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS04250 bd66a7b39395d2629f5df76343c9fbe4 195 SUPERFAMILY SSF49401 36 194 2.78E-35 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS04250 bd66a7b39395d2629f5df76343c9fbe4 195 Pfam PF00419 Fimbrial protein 38 194 3.1E-18 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS15240 f7f903af51b38dd75aaafcfe8eeceeab 595 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 594 6.5E-119 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS15240 f7f903af51b38dd75aaafcfe8eeceeab 595 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 590 1.7E-132 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS13165 d1e0c417976a149d9cf432bbb80c1648 330 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 255 323 4.1E-7 T 06-07-2017 IPR013351 Type III secretion system effector delivery regulator TyeA-related LFZ55_RS13165 d1e0c417976a149d9cf432bbb80c1648 330 Pfam PF07201 HrpJ-like domain 46 192 7.3E-17 T 06-07-2017 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 LFZ55_RS13165 d1e0c417976a149d9cf432bbb80c1648 330 SUPERFAMILY SSF140591 251 322 2.04E-18 T 06-07-2017 LFZ55_RS03070 ac4b9a9f13210fd1d57037acc68dca89 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.2E-30 T 06-07-2017 IPR010279 Protein of unknown function DUF883, ElaB LFZ55_RS00890 916b222af8890c0036b9f6f225cea678 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 4.7E-16 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LFZ55_RS00890 916b222af8890c0036b9f6f225cea678 274 SMART SM00047 127 256 1.1E-37 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LFZ55_RS14595 c1c445ade21ded12d0e6cb74232787b0 245 Pfam PF02811 PHP domain 5 81 3.9E-8 T 06-07-2017 IPR004013 PHP domain GO:0003824 LFZ55_RS14595 c1c445ade21ded12d0e6cb74232787b0 245 Gene3D G3DSA:3.20.20.140 1 236 8.6E-64 T 06-07-2017 LFZ55_RS14595 c1c445ade21ded12d0e6cb74232787b0 245 SMART SM00481 4 78 2.2E-20 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LFZ55_RS14595 c1c445ade21ded12d0e6cb74232787b0 245 SUPERFAMILY SSF89550 3 241 2.49E-63 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 LFZ55_RS14595 c1c445ade21ded12d0e6cb74232787b0 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 51.188 T 06-07-2017 IPR023710 Probable phosphatase YcdX GO:0008270 LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 21.122 T 06-07-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 4.9E-38 T 06-07-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 Gene3D G3DSA:3.90.1140.10 6 175 3.1E-48 T 06-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 SUPERFAMILY SSF55144 5 175 4.71E-44 T 06-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 Pfam PF02834 LigT like Phosphoesterase 92 134 2.1E-7 T 06-07-2017 IPR014051 Phosphoesterase, HXTX LFZ55_RS19425 09f0488bf72335dcf85c2bb86e8f326c 176 Pfam PF02834 LigT like Phosphoesterase 11 89 1.4E-12 T 06-07-2017 IPR014051 Phosphoesterase, HXTX LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 50 64 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 66 81 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 154 172 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 119 134 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 86 104 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 33 47 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 211 225 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 183 197 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PRINTS PR01593 Salmonella type III secretion SopE effector protein signature 11 28 1.9E-75 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 Pfam PF05364 Salmonella type III secretion SopE effector N-terminus 2 75 1.3E-40 T 06-07-2017 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 Pfam PF07487 SopE GEF domain 77 240 1.7E-101 T 06-07-2017 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain GO:0005085|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 PIRSF PIRSF034781 1 240 2.9E-107 T 06-07-2017 IPR005414 Guanine nucleotide exchange factor SopE GO:0005085|GO:0005576|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS10245 3830fe4c60e75fbca3baa56627887e97 240 SUPERFAMILY SSF81832 68 240 1.16E-76 T 06-07-2017 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain GO:0005085|GO:0009405|GO:0031532|GO:0090630 LFZ55_RS06815 5d94d8ec736613a8958ffac95db94b49 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 1.5E-34 T 06-07-2017 IPR020910 Uncharacterised protein family UPF0370 LFZ55_RS06815 5d94d8ec736613a8958ffac95db94b49 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.781 T 06-07-2017 IPR020910 Uncharacterised protein family UPF0370 LFZ55_RS12890 50cc200efa24f9334eba9fbed8e1d05d 390 Gene3D G3DSA:3.90.1150.10 242 384 2.3E-49 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS12890 50cc200efa24f9334eba9fbed8e1d05d 390 SUPERFAMILY SSF53383 1 387 2.18E-82 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS12890 50cc200efa24f9334eba9fbed8e1d05d 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 9.3E-113 T 06-07-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LFZ55_RS12890 50cc200efa24f9334eba9fbed8e1d05d 390 Gene3D G3DSA:3.40.640.10 44 241 2.1E-44 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS12890 50cc200efa24f9334eba9fbed8e1d05d 390 Pfam PF00155 Aminotransferase class I and II 30 379 2.4E-52 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 06-07-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 06-07-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 PRINTS PR00112 Acylphosphatase signature 26 51 3.5E-7 T 06-07-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 PRINTS PR00112 Acylphosphatase signature 61 81 3.5E-7 T 06-07-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 PRINTS PR00112 Acylphosphatase signature 5 20 3.5E-7 T 06-07-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 Gene3D G3DSA:3.30.70.100 5 92 2.1E-32 T 06-07-2017 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 31.139 T 06-07-2017 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 Pfam PF00708 Acylphosphatase 8 92 3.2E-26 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS15485 fc171cf736e8aaa3d899780b515854f0 93 SUPERFAMILY SSF54975 2 93 2.16E-31 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LFZ55_RS14855 40312f614b15db996917f7b3d2441173 498 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 443 6.3E-68 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS14855 40312f614b15db996917f7b3d2441173 498 Pfam PF00474 Sodium:solute symporter family 38 442 4.8E-42 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS19485 7f8f40c6f9b5a1bf3a8825a4d9de9a48 146 SUPERFAMILY SSF53062 1 125 4.19E-26 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS19485 7f8f40c6f9b5a1bf3a8825a4d9de9a48 146 Pfam PF03610 PTS system fructose IIA component 3 116 1.9E-24 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS19485 7f8f40c6f9b5a1bf3a8825a4d9de9a48 146 Gene3D G3DSA:3.40.50.510 1 133 1.8E-27 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 Gene3D G3DSA:3.40.50.150 155 364 5.1E-44 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.495 T 06-07-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 9.8E-188 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 SUPERFAMILY SSF53335 6 363 2.05E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS22920 bd73becd6df72998ef2d1e3d705e84fa 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 1.6E-188 T 06-07-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 4.1E-20 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 SUPERFAMILY SSF52540 3 258 9.92E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.4E-16 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 Pfam PF00005 ABC transporter 24 187 6.9E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 Gene3D G3DSA:3.40.50.300 2 262 3.2E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11320 594b2dce7bd65eb2c1d625cbd4c66ab2 330 SMART SM00382 32 235 3.7E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08805 4680540f4b864255d248e4c09c2e250a 372 Pfam PF00534 Glycosyl transferases group 1 197 345 2.3E-8 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS08805 4680540f4b864255d248e4c09c2e250a 372 SUPERFAMILY SSF53756 62 370 1.96E-17 T 06-07-2017 LFZ55_RS11540 b03ade3fae82711f5a9cf14680522235 274 Pfam PF16583 Zinc-regulated secreted antivirulence protein C-terminal domain 132 264 3.9E-32 T 06-07-2017 IPR032262 Zinc-regulated secreted antivirulence protein, C-terminal LFZ55_RS11925 9b018889295ad0b62fb51afc8d31cccb 337 Pfam PF03595 Voltage-dependent anion channel 12 309 5.2E-39 T 06-07-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 LFZ55_RS11925 9b018889295ad0b62fb51afc8d31cccb 337 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 13 316 1.4E-103 T 06-07-2017 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 6.5E-40 T 06-07-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 SMART SM00971 9 113 4.7E-65 T 06-07-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 SUPERFAMILY SSF51161 5 260 2.77E-68 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 4.9E-75 T 06-07-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 Gene3D G3DSA:1.10.3130.10 7 140 1.5E-51 T 06-07-2017 LFZ55_RS00750 5620d62e0043f2c12270a0e20f80633e 273 Gene3D G3DSA:2.160.10.10 143 250 7.7E-32 T 06-07-2017 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 5.0E-43 T 06-07-2017 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 9.2E-29 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 PRINTS PR00050 Cold shock protein signature 4 19 6.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 PRINTS PR00050 Cold shock protein signature 25 34 6.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 PRINTS PR00050 Cold shock protein signature 40 58 6.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 SMART SM00357 3 67 4.0E-28 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 PIRSF PIRSF002599 1 73 4.6E-23 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 06-07-2017 IPR019844 Cold-shock conserved site LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 SUPERFAMILY SSF50249 1 66 3.18E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS15915 ffe5fae9dca30c58d5565170f0760d7a 73 Gene3D G3DSA:2.40.50.140 1 65 7.9E-30 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS21005 b6fce6aecf17e92f8e7d0de10a44995c 445 Pfam PF03743 Bacterial conjugation TrbI-like protein 316 421 8.0E-6 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LFZ55_RS21005 b6fce6aecf17e92f8e7d0de10a44995c 445 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 4 435 1.7E-156 T 06-07-2017 IPR021207 Integrating conjugative element protein, PFL4705 LFZ55_RS08560 b83af08bae2594f19d419ac3d1ffd4f4 423 Gene3D G3DSA:1.20.1250.20 3 189 8.0E-15 T 06-07-2017 LFZ55_RS08560 b83af08bae2594f19d419ac3d1ffd4f4 423 Gene3D G3DSA:1.20.1250.20 202 406 5.8E-24 T 06-07-2017 LFZ55_RS08560 b83af08bae2594f19d419ac3d1ffd4f4 423 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 416 1.6E-192 T 06-07-2017 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 LFZ55_RS08560 b83af08bae2594f19d419ac3d1ffd4f4 423 Pfam PF03825 Nucleoside H+ symporter 1 404 1.1E-181 T 06-07-2017 LFZ55_RS08560 b83af08bae2594f19d419ac3d1ffd4f4 423 SUPERFAMILY SSF103473 4 404 6.54E-41 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS04605 29dd7d0967663a084da30e4cbbb81659 181 Hamap MF_01104 Protein Syd [syd]. 3 181 34.929 T 06-07-2017 IPR009948 Syd GO:0009898 LFZ55_RS04605 29dd7d0967663a084da30e4cbbb81659 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 9.8E-71 T 06-07-2017 IPR009948 Syd GO:0009898 LFZ55_RS18330 bf318bd5deabaeeb4e25770b37a6fc5f 299 Pfam PF00348 Polyprenyl synthetase 34 270 1.3E-56 T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS18330 bf318bd5deabaeeb4e25770b37a6fc5f 299 SUPERFAMILY SSF48576 1 278 9.12E-89 T 06-07-2017 IPR008949 Isoprenoid synthase domain LFZ55_RS18330 bf318bd5deabaeeb4e25770b37a6fc5f 299 Gene3D G3DSA:1.10.600.10 2 297 3.3E-92 T 06-07-2017 IPR008949 Isoprenoid synthase domain LFZ55_RS18330 bf318bd5deabaeeb4e25770b37a6fc5f 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS18330 bf318bd5deabaeeb4e25770b37a6fc5f 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 Pfam PF00929 Exonuclease 20 194 7.8E-39 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 Gene3D G3DSA:3.30.420.10 12 208 4.7E-57 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 SUPERFAMILY SSF53098 13 207 2.6E-55 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 118.083 T 06-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 SMART SM00479 18 203 2.3E-35 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LFZ55_RS13045 bc4598cdb5551d3e6e9df6014fe2f150 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 7.8E-111 T 06-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LFZ55_RS02695 d67d1379da422c2abc60ab6cd5591249 323 Pfam PF00348 Polyprenyl synthetase 30 263 3.3E-75 T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS02695 d67d1379da422c2abc60ab6cd5591249 323 SUPERFAMILY SSF48576 6 322 1.73E-100 T 06-07-2017 IPR008949 Isoprenoid synthase domain LFZ55_RS02695 d67d1379da422c2abc60ab6cd5591249 323 Gene3D G3DSA:1.10.600.10 3 322 1.7E-103 T 06-07-2017 IPR008949 Isoprenoid synthase domain LFZ55_RS02695 d67d1379da422c2abc60ab6cd5591249 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS02695 d67d1379da422c2abc60ab6cd5591249 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 LFZ55_RS04750 e8ab36c3834e3fa75699a8632019cad0 248 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 3.2E-14 T 06-07-2017 IPR013422 CRISPR-associated protein Cas5, N-terminal LFZ55_RS04750 e8ab36c3834e3fa75699a8632019cad0 248 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 233 4.9E-45 T 06-07-2017 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 LFZ55_RS04750 e8ab36c3834e3fa75699a8632019cad0 248 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 232 2.1E-35 T 06-07-2017 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 SMART SM00382 28 211 4.1E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 Pfam PF00005 ABC transporter 21 161 8.5E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 SUPERFAMILY SSF52540 4 241 4.73E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 Gene3D G3DSA:3.40.50.300 4 234 6.2E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS21130 f3e917b9ba9191c4f6524d4f6b82e4c9 355 ProSitePatterns PS00211 ABC transporters family signature. 333 347 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS14990 e2910e51e6512b05a67dd89de40ac80e 126 Gene3D G3DSA:3.30.429.10 1 126 1.2E-50 T 06-07-2017 LFZ55_RS14990 e2910e51e6512b05a67dd89de40ac80e 126 SUPERFAMILY SSF55331 2 126 1.71E-46 T 06-07-2017 IPR014347 Tautomerase/MIF superfamily LFZ55_RS14990 e2910e51e6512b05a67dd89de40ac80e 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 1.3E-26 T 06-07-2017 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.2E-19 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.2E-19 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 1.2E-19 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 1.2E-19 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 SUPERFAMILY SSF47384 234 303 2.55E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 Gene3D G3DSA:3.30.450.20 65 121 2.7E-4 T 06-07-2017 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 SMART SM00387 349 456 2.0E-35 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 Gene3D G3DSA:1.10.287.130 234 302 1.5E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 SMART SM00388 241 307 1.3E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 303 9.9E-13 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 SUPERFAMILY SSF103190 35 159 7.06E-14 T 06-07-2017 IPR029151 Periplasmic sensor domain-like LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 453 1.4E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 Gene3D G3DSA:3.30.565.10 307 454 7.7E-45 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22715 9cd9d85b01bb0c769af9f08ea4fd9dd6 460 SUPERFAMILY SSF55874 297 454 8.77E-42 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00665 cffae9ce242acc79cb1a2fcab80afc48 269 TIGRFAM TIGR04437 WaaZ_KDO_III: 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ 6 256 1.0E-139 T 06-07-2017 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ LFZ55_RS00665 cffae9ce242acc79cb1a2fcab80afc48 269 Gene3D G3DSA:3.90.1480.10 23 246 3.4E-11 T 06-07-2017 LFZ55_RS00665 cffae9ce242acc79cb1a2fcab80afc48 269 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 1 268 9.0E-149 T 06-07-2017 LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 6.9E-97 T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 SUPERFAMILY SSF53335 12 204 2.3E-47 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 Gene3D G3DSA:3.40.50.150 11 205 9.3E-64 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.134 T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LFZ55_RS04820 0945f3ea18b7adc845718f63b5353887 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 1.3E-80 T 06-07-2017 LFZ55_RS05245 b7149b64904220cc14e87501d81e4381 187 PIRSF PIRSF038321 2 182 2.3E-88 T 06-07-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 LFZ55_RS05245 b7149b64904220cc14e87501d81e4381 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 8.9E-76 T 06-07-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 LFZ55_RS05245 b7149b64904220cc14e87501d81e4381 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 4.4E-112 T 06-07-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 SUPERFAMILY SSF158472 176 225 1.29E-5 T 06-07-2017 LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 Pfam PF00672 HAMP domain 155 223 7.9E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 SMART SM00304 174 227 1.1E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 Pfam PF07730 Histidine kinase 361 425 4.7E-18 T 06-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 SUPERFAMILY SSF55874 435 555 1.31E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 Gene3D G3DSA:3.30.565.10 427 557 1.2E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 7.3E-22 T 06-07-2017 IPR029095 NarX-like, N-terminal LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 2.3E-9 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS06835 5d44830ac021a8f602b050bd438df21b 566 SMART SM00387 465 559 2.0E-13 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS22650 7af42509607789e9de4d515bb3101605 135 Pfam PF04266 ASCH domain 23 131 1.3E-21 T 06-07-2017 IPR007374 ASCH domain LFZ55_RS22650 7af42509607789e9de4d515bb3101605 135 SUPERFAMILY SSF88697 5 132 2.26E-42 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS22650 7af42509607789e9de4d515bb3101605 135 SMART SM01022 15 132 2.0E-38 T 06-07-2017 IPR007374 ASCH domain LFZ55_RS22650 7af42509607789e9de4d515bb3101605 135 Gene3D G3DSA:3.10.400.10 6 132 6.1E-47 T 06-07-2017 LFZ55_RS22650 7af42509607789e9de4d515bb3101605 135 PIRSF PIRSF021320 2 135 4.2E-42 T 06-07-2017 IPR009326 Protein of unknown function DUF984 LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 SMART SM01007 8 182 1.2E-69 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 7.2E-50 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 60.318 T 06-07-2017 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 8.9E-129 T 06-07-2017 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 SUPERFAMILY SSF53639 2 212 1.79E-68 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS04570 72e1d493d4dd68cb4ab6c923e7892077 215 Gene3D G3DSA:3.40.225.10 2 210 1.5E-66 T 06-07-2017 IPR001303 Class II aldolase/adducin N-terminal LFZ55_RS22175 6c999773dc1f7a67ce76e50e70fcb99f 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 1.2E-92 T 06-07-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LFZ55_RS22175 6c999773dc1f7a67ce76e50e70fcb99f 259 Gene3D G3DSA:1.10.3720.10 61 258 4.2E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22175 6c999773dc1f7a67ce76e50e70fcb99f 259 SUPERFAMILY SSF161098 62 253 1.31E-34 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22175 6c999773dc1f7a67ce76e50e70fcb99f 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 2.0E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS21690 877dff4680d2965f11bb3b85c370f505 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.567 T 06-07-2017 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 LFZ55_RS21690 877dff4680d2965f11bb3b85c370f505 141 Pfam PF02082 Transcriptional regulator 2 82 4.1E-24 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS21690 877dff4680d2965f11bb3b85c370f505 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 4.8E-36 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type LFZ55_RS21690 877dff4680d2965f11bb3b85c370f505 141 Gene3D G3DSA:1.10.10.10 2 133 3.6E-40 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS21690 877dff4680d2965f11bb3b85c370f505 141 SUPERFAMILY SSF46785 2 131 7.49E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 29.725 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 1.2E-100 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PIRSF PIRSF000513 9 262 4.6E-92 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 SUPERFAMILY SSF53613 13 258 1.73E-56 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 1.6E-41 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 Gene3D G3DSA:3.40.1190.20 14 259 1.9E-81 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08535 53e06091581e975a31206b5b617538e6 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 260 5.0E-87 T 06-07-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 54 1.0E-9 T 06-07-2017 LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 SUPERFAMILY SSF143414 3 88 4.71E-23 T 06-07-2017 LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 Pfam PF00936 BMC domain 4 79 7.5E-21 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 107 161 1.2E-38 T 06-07-2017 IPR032298 Ethanolamine utilization protein EutK, C-terminal LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 Gene3D G3DSA:1.10.10.10 112 162 1.3E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS06975 903a98c669c436d35aa148657e04d388 164 SMART SM00877 3 79 2.3E-25 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS11730 41e567f9fb416723548e46908dfbbb94 226 Gene3D G3DSA:1.10.3720.10 16 218 3.3E-35 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11730 41e567f9fb416723548e46908dfbbb94 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 219 2.0E-12 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11730 41e567f9fb416723548e46908dfbbb94 226 SUPERFAMILY SSF161098 18 204 2.22E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11730 41e567f9fb416723548e46908dfbbb94 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 111 1.4E-23 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS12035 166f9887bfc47d2fbc9b1aa6e24eb7a4 993 Pfam PF07520 Virulence factor SrfB 1 990 0.0 T 06-07-2017 IPR009216 Virulence factor SrfB LFZ55_RS12035 166f9887bfc47d2fbc9b1aa6e24eb7a4 993 PIRSF PIRSF034585 1 993 0.0 T 06-07-2017 IPR009216 Virulence factor SrfB LFZ55_RS12035 166f9887bfc47d2fbc9b1aa6e24eb7a4 993 SUPERFAMILY SSF53067 700 825 3.31E-6 T 06-07-2017 LFZ55_RS12035 166f9887bfc47d2fbc9b1aa6e24eb7a4 993 SUPERFAMILY SSF53067 560 621 3.31E-6 T 06-07-2017 LFZ55_RS12035 166f9887bfc47d2fbc9b1aa6e24eb7a4 993 Gene3D G3DSA:3.30.420.40 561 624 3.5E-4 T 06-07-2017 LFZ55_RS14895 52b90dd148954c7ee5d286f971dda778 131 ProDom PD498860 RC0070 95 127 0.004 T 06-07-2017 LFZ55_RS14895 52b90dd148954c7ee5d286f971dda778 131 Pfam PF07007 Protein of unknown function (DUF1311) 22 110 9.4E-20 T 06-07-2017 IPR009739 Protein of unknown function DUF1311 LFZ55_RS18065 82d9907bb49ee0573812f07a9282deb6 167 Pfam PF04754 Putative transposase, YhgA-like 2 64 2.8E-14 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS18065 82d9907bb49ee0573812f07a9282deb6 167 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 4 163 3.6E-19 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 Pfam PF00128 Alpha amylase, catalytic domain 86 340 4.4E-19 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 SMART SM00642 54 482 1.1E-7 T 06-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 Gene3D G3DSA:3.20.20.80 48 135 2.0E-110 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 Gene3D G3DSA:3.20.20.80 211 484 2.0E-110 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 SUPERFAMILY SSF51445 399 502 2.2E-80 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 SUPERFAMILY SSF51445 46 359 2.2E-80 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 Gene3D G3DSA:2.60.40.1180 499 561 1.2E-13 T 06-07-2017 IPR013780 Glycosyl hydrolase, all-beta LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 PIRSF PIRSF003059 4 562 1.4E-208 T 06-07-2017 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 LFZ55_RS11415 fb5096db929a317c828e06529424498f 562 Gene3D G3DSA:3.90.400.10 136 205 1.4E-20 T 06-07-2017 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 SUPERFAMILY SSF102114 24 105 1.55E-6 T 06-07-2017 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 PIRSF PIRSF000368 1 154 4.3E-60 T 06-07-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.3E-52 T 06-07-2017 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 Gene3D G3DSA:3.20.20.70 22 129 5.2E-8 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS21340 4e0ae27ba7c12e29b1a04f43a6e3bc49 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 153 1.2E-64 T 06-07-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 LFZ55_RS02710 6a0e6836c9e5cf8969dfdd75a16fc365 321 Pfam PF00892 EamA-like transporter family 7 142 6.5E-28 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS02710 6a0e6836c9e5cf8969dfdd75a16fc365 321 Pfam PF00892 EamA-like transporter family 159 291 1.6E-18 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS02710 6a0e6836c9e5cf8969dfdd75a16fc365 321 SUPERFAMILY SSF103481 42 143 8.63E-13 T 06-07-2017 LFZ55_RS10865 667f746ccda83d29f043af66382cd9eb 207 SUPERFAMILY SSF89392 34 206 1.18E-55 T 06-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX LFZ55_RS10865 667f746ccda83d29f043af66382cd9eb 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.471 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LFZ55_RS10865 667f746ccda83d29f043af66382cd9eb 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 206 1.8E-95 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LFZ55_RS10865 667f746ccda83d29f043af66382cd9eb 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 8.2E-50 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LFZ55_RS10865 667f746ccda83d29f043af66382cd9eb 207 Gene3D G3DSA:2.50.20.10 15 206 7.7E-70 T 06-07-2017 LFZ55_RS21560 d23165aa95605af2f4437ef1d2c8d173 211 Pfam PF04225 Opacity-associated protein A LysM-like domain 126 210 1.1E-34 T 06-07-2017 IPR007340 Opacity-associated protein A LFZ55_RS21560 d23165aa95605af2f4437ef1d2c8d173 211 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 49 9.4E-8 T 06-07-2017 IPR013731 Opacity-associated protein A, N-terminal LFZ55_RS20570 581aa618aa6896b4ca268b5458a78f70 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 40.664 T 06-07-2017 IPR020917 Primosomal protein 1 GO:0006260 LFZ55_RS08850 b77f44be444c49dc83daaf60f5556082 327 SUPERFAMILY SSF160355 54 292 4.19E-69 T 06-07-2017 LFZ55_RS08850 b77f44be444c49dc83daaf60f5556082 327 Pfam PF02706 Chain length determinant protein 16 183 2.6E-17 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LFZ55_RS08850 b77f44be444c49dc83daaf60f5556082 327 Gene3D G3DSA:3.30.1890.10 251 294 3.7E-56 T 06-07-2017 LFZ55_RS08850 b77f44be444c49dc83daaf60f5556082 327 Gene3D G3DSA:3.30.1890.10 52 186 3.7E-56 T 06-07-2017 LFZ55_RS02230 a48c3ec0cd8edbe34c0f1c5f27a84878 190 Pfam PF01300 Telomere recombination 16 189 4.0E-43 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 LFZ55_RS02230 a48c3ec0cd8edbe34c0f1c5f27a84878 190 SUPERFAMILY SSF55821 5 187 1.53E-56 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS02230 a48c3ec0cd8edbe34c0f1c5f27a84878 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.625 T 06-07-2017 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 LFZ55_RS02230 a48c3ec0cd8edbe34c0f1c5f27a84878 190 Gene3D G3DSA:3.90.870.10 8 190 1.0E-55 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS19920 3f148a47d20bc4cd495c9a7375264aaa 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 218 2.2E-59 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS19920 3f148a47d20bc4cd495c9a7375264aaa 219 SUPERFAMILY SSF55120 8 216 3.84E-62 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS19920 3f148a47d20bc4cd495c9a7375264aaa 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 1.2E-28 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS19920 3f148a47d20bc4cd495c9a7375264aaa 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS19205 e6cdae5938f3d2ddb8f77a4f4a01078d 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 2.0E-27 T 06-07-2017 IPR009778 Modulator of Rho-dependent transcription termination LFZ55_RS19205 e6cdae5938f3d2ddb8f77a4f4a01078d 86 SUPERFAMILY SSF101744 1 85 2.09E-30 T 06-07-2017 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 Gene3D G3DSA:3.40.50.300 55 257 1.6E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 SUPERFAMILY SSF52540 9 322 1.13E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 Gene3D G3DSA:1.10.287.130 263 331 7.5E-33 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 Gene3D G3DSA:1.20.5.170 6 54 2.0E-18 T 06-07-2017 LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 Pfam PF03308 ArgK protein 22 293 6.6E-108 T 06-07-2017 LFZ55_RS04020 0680e49264a434cd490ad12a3f41da9f 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 323 8.6E-120 T 06-07-2017 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 LFZ55_RS09485 248aac783f825ebe045d4cd336793d14 305 PIRSF PIRSF016660 3 305 9.1E-127 T 06-07-2017 IPR008526 Inner membrane protein YedI LFZ55_RS09485 248aac783f825ebe045d4cd336793d14 305 Pfam PF05661 Protein of unknown function (DUF808) 6 292 1.4E-113 T 06-07-2017 IPR008526 Inner membrane protein YedI LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.348 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 SMART SM01001 8 159 7.3E-103 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 SUPERFAMILY SSF52255 7 165 5.76E-67 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 Gene3D G3DSA:3.40.50.7700 4 163 7.2E-75 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 Pfam PF00731 AIR carboxylase 9 157 1.0E-63 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 5.3E-66 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LFZ55_RS17870 3aefaf4b214a3d9c172eae1124bf2fc0 169 PIRSF PIRSF001338 5 166 7.1E-67 T 06-07-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 LFZ55_RS24855 a8a30f17fe56cc135f3250d1628284c6 71 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 1 71 3.0E-34 T 06-07-2017 IPR020150 Type IV conjugative transfer system protein TrbE LFZ55_RS24855 a8a30f17fe56cc135f3250d1628284c6 71 Pfam PF11100 Conjugal transfer protein TrbE 2 67 3.4E-24 T 06-07-2017 IPR020150 Type IV conjugative transfer system protein TrbE LFZ55_RS16765 2b908e14e2df4124ca03ac930aa44d77 452 PIRSF PIRSF006351 1 448 2.4E-124 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS16765 2b908e14e2df4124ca03ac930aa44d77 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 6.8E-46 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS16765 2b908e14e2df4124ca03ac930aa44d77 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 439 1.6E-151 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS16765 2b908e14e2df4124ca03ac930aa44d77 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 439 1.6E-151 T 06-07-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 2.4E-11 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 2.4E-11 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 2.4E-11 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 Gene3D G3DSA:3.50.50.60 469 625 1.1E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 Gene3D G3DSA:3.50.50.60 361 463 9.5E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 5.8E-99 T 06-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 3.7E-6 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 3.7E-6 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 649 9.3E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 SUPERFAMILY SSF51395 1 362 2.23E-112 T 06-07-2017 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 SUPERFAMILY SSF51905 556 650 3.03E-27 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 SUPERFAMILY SSF51905 461 518 3.03E-27 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 Gene3D G3DSA:3.20.20.70 3 360 6.5E-123 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS03135 fbff1f5c063992ed6e4465953c32d3c4 672 SUPERFAMILY SSF51971 333 520 1.65E-41 T 06-07-2017 LFZ55_RS01360 9f751b59c399a2c4b18f95888296af64 185 Gene3D G3DSA:3.40.1000.10 52 183 8.1E-4 T 06-07-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 LFZ55_RS01360 9f751b59c399a2c4b18f95888296af64 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 5.7E-31 T 06-07-2017 IPR014894 Protein DcrB LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 Gene3D G3DSA:3.80.30.10 122 297 3.6E-54 T 06-07-2017 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 291 2.0E-105 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 PIRSF PIRSF000371 1 298 1.4E-91 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 Pfam PF04055 Radical SAM superfamily 19 230 3.8E-32 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 SUPERFAMILY SSF102114 101 265 1.8E-14 T 06-07-2017 LFZ55_RS16395 f37483a3923de656f766e3cff79895de 299 Pfam PF13353 4Fe-4S single cluster domain 12 191 3.0E-10 T 06-07-2017 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 Gene3D G3DSA:3.40.1050.10 1 215 7.6E-76 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 06-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 06-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 Pfam PF00484 Carbonic anhydrase 38 187 2.5E-50 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 SUPERFAMILY SSF53056 2 210 6.54E-74 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS19500 ff8b0d5aa82353f976b240c8543ad8cb 220 SMART SM00947 30 192 1.0E-68 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 SUPERFAMILY SSF46894 146 213 1.6E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 SMART SM00448 7 120 6.2E-36 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 Pfam PF00072 Response regulator receiver domain 9 120 3.4E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 SMART SM00421 153 210 1.3E-25 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.6E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 Gene3D G3DSA:1.10.10.10 155 214 1.7E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 Gene3D G3DSA:3.40.50.2300 5 154 6.0E-40 T 06-07-2017 LFZ55_RS10920 dd2b39cacb9e85dc7af79accf87b0993 216 SUPERFAMILY SSF52172 6 135 5.27E-36 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 108 125 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 PRINTS PR00969 Pili chaperone signature 109 126 8.7E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 PRINTS PR00969 Pili chaperone signature 31 40 8.7E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 PRINTS PR00969 Pili chaperone signature 80 101 8.7E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 PRINTS PR00969 Pili chaperone signature 136 151 8.7E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 PRINTS PR00969 Pili chaperone signature 171 186 8.7E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 SUPERFAMILY SSF49584 149 237 1.2E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 Gene3D G3DSA:2.60.40.360 31 155 2.7E-34 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 Gene3D G3DSA:2.60.40.1070 159 236 7.1E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 SUPERFAMILY SSF49354 27 154 1.26E-33 T 06-07-2017 IPR008962 PapD-like LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 233 3.9E-8 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS18725 2f2220e6c93ca6309caf469410bacf0b 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 155 1.0E-36 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.239 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 Gene3D G3DSA:3.90.226.10 17 285 1.0E-80 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 Pfam PF01039 Carboxyl transferase domain 57 240 5.3E-18 T 06-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 SUPERFAMILY SSF52096 23 284 2.18E-91 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS07425 268ffe77efdf04c7ab7e6070fdcde259 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 4.1E-152 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LFZ55_RS21930 40f21652c289d0a838ef1798a3f683da 282 SUPERFAMILY SSF50956 42 279 1.29E-26 T 06-07-2017 LFZ55_RS21930 40f21652c289d0a838ef1798a3f683da 282 Gene3D G3DSA:2.130.10.10 187 268 6.7E-7 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS21930 40f21652c289d0a838ef1798a3f683da 282 Gene3D G3DSA:2.130.10.10 47 85 6.7E-7 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS21930 40f21652c289d0a838ef1798a3f683da 282 Pfam PF06977 SdiA-regulated 33 277 7.5E-73 T 06-07-2017 IPR009722 SdiA-regulated LFZ55_RS07830 0486fde04344228a0809589ddccd20eb 356 Gene3D G3DSA:3.20.20.190 29 352 2.7E-96 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS07830 0486fde04344228a0809589ddccd20eb 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 347 2.3E-77 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LFZ55_RS07830 0486fde04344228a0809589ddccd20eb 356 SUPERFAMILY SSF51695 29 349 1.78E-94 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 Gene3D G3DSA:3.40.309.10 269 453 1.3E-69 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 Gene3D G3DSA:3.40.605.10 10 268 8.0E-107 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 2.6E-175 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 SUPERFAMILY SSF53720 6 481 1.17E-175 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 1.1E-238 T 06-07-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 LFZ55_RS05470 89ca1bcebc192d7927cc658a28fcd8fe 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 Gene3D G3DSA:2.40.30.40 71 157 2.1E-36 T 06-07-2017 IPR023367 Peptidase M42, domain 2 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 PIRSF PIRSF001123 1 352 1.7E-131 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 SUPERFAMILY SSF53187 3 76 3.39E-56 T 06-07-2017 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 SUPERFAMILY SSF53187 167 346 3.39E-56 T 06-07-2017 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 SUPERFAMILY SSF101821 66 175 1.98E-32 T 06-07-2017 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 Pfam PF05343 M42 glutamyl aminopeptidase 43 333 6.2E-97 T 06-07-2017 IPR008007 Peptidase M42 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 Gene3D G3DSA:3.40.630.10 167 355 4.8E-73 T 06-07-2017 LFZ55_RS23250 f6ee2c84e06080d1c06c5e794703f840 356 Gene3D G3DSA:3.40.630.10 3 70 4.8E-73 T 06-07-2017 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 Gene3D G3DSA:1.10.1660.10 1 56 1.1E-27 T 06-07-2017 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 SMART SM00422 2 71 8.7E-34 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 5.6E-21 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.3E-63 T 06-07-2017 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 SUPERFAMILY SSF46955 2 121 3.66E-35 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 Gene3D G3DSA:1.10.1660.10 57 136 1.0E-33 T 06-07-2017 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.4E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.4E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS02180 ef337994a1f67a75d1f7c3ca46d7e1f1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.4E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 PIRSF PIRSF005539 1 297 1.0E-105 T 06-07-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 20 293 4.4E-52 T 06-07-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 Pfam PF12697 Alpha/beta hydrolase family 32 281 6.1E-18 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 SUPERFAMILY SSF53474 18 293 1.46E-50 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 1.8E-12 T 06-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 32 40 1.8E-12 T 06-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 59 70 1.8E-12 T 06-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LFZ55_RS13325 df10c8797da7ebaa63db0cc0ba639b55 297 Gene3D G3DSA:3.40.50.1820 18 296 2.8E-45 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 Pfam PF00455 DeoR C terminal sensor domain 118 247 9.8E-11 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 SMART SM01134 107 258 6.5E-5 T 06-07-2017 LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 SMART SM00420 7 59 1.6E-9 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 Gene3D G3DSA:1.10.10.10 1 59 1.3E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 Pfam PF08220 DeoR-like helix-turn-helix domain 7 60 2.5E-11 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS20735 aee9ad7f3e53d91367d2310f1cb98bf2 262 SUPERFAMILY SSF46785 6 58 2.24E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.0E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 245 257 3.0E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 3.0E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 3.0E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 334 351 3.0E-18 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 SUPERFAMILY SSF56935 22 383 2.28E-83 T 06-07-2017 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 251 268 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 286 305 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 8.9E-75 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 Gene3D G3DSA:2.40.160.10 22 383 2.3E-107 T 06-07-2017 IPR023614 Porin domain LFZ55_RS12840 9c332b4bfd581627a69446887bbeb200 383 Pfam PF00267 Gram-negative porin 27 383 3.7E-150 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LFZ55_RS23640 fb89f15ffe139a76dfc048e5ac081690 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 1.0E-55 T 06-07-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 LFZ55_RS23640 fb89f15ffe139a76dfc048e5ac081690 206 Pfam PF01810 LysE type translocator 16 202 3.4E-48 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS23640 fb89f15ffe139a76dfc048e5ac081690 206 PIRSF PIRSF006324 1 205 1.2E-52 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS23595 f6e780d5dd7a1f18005b04230fb6f151 476 Pfam PF02646 RmuC family 137 433 8.4E-107 T 06-07-2017 IPR003798 DNA recombination RmuC LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 Pfam PF09278 MerR, DNA binding 54 119 3.5E-14 T 06-07-2017 IPR015358 Transcription regulator MerR, DNA binding LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 151 4.8E-74 T 06-07-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 SUPERFAMILY SSF46955 12 134 3.44E-27 T 06-07-2017 IPR009061 Putative DNA-binding domain LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 Pfam PF00376 MerR family regulatory protein 13 49 1.4E-13 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.8E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.8E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.8E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 SMART SM00422 12 80 2.1E-22 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 Gene3D G3DSA:1.10.1660.10 65 144 2.1E-13 T 06-07-2017 LFZ55_RS22345 c3b821196905950d77970de3acb50ddb 152 Gene3D G3DSA:1.10.1660.10 10 64 6.3E-18 T 06-07-2017 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.5E-108 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.1E-99 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.654 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 Gene3D G3DSA:3.20.20.70 1 265 1.5E-98 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 06-07-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 LFZ55_RS11135 4b65d949d8abdf4e4147bda7681c6707 268 SUPERFAMILY SSF51366 1 265 3.77E-91 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 Pfam PF00381 PTS HPr component phosphorylation site 9 86 3.4E-24 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 18 25 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 PRINTS PR00107 Phosphocarrier protein signature 61 78 3.8E-14 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 PRINTS PR00107 Phosphocarrier protein signature 18 34 3.8E-14 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 PRINTS PR00107 Phosphocarrier protein signature 46 61 3.8E-14 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 SUPERFAMILY SSF55594 8 95 6.02E-23 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 Gene3D G3DSA:3.30.1340.10 8 95 2.2E-28 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS01255 88181465519555bf89a40a8776c75c0d 95 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 7 86 2.4E-22 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 60 82 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 163 190 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 191 207 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 83 101 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 102 121 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 140 162 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 208 233 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 PRINTS PR01003 Flagellar assembly protein FliH signature 122 139 9.1E-121 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LFZ55_RS09570 117b082c2d08c27a216243e203d2fce7 235 Pfam PF02108 Flagellar assembly protein FliH 103 226 2.4E-41 T 06-07-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE LFZ55_RS04395 a611ffd92cb33af4b7fac686094a62f7 237 Pfam PF03741 Integral membrane protein TerC family 17 203 1.7E-52 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 LFZ55_RS19450 22caff3ab54c48f4a334f53ac6c7710c 159 SUPERFAMILY SSF55083 1 148 4.05E-53 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS19450 22caff3ab54c48f4a334f53ac6c7710c 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.5E-46 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS19450 22caff3ab54c48f4a334f53ac6c7710c 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS19450 22caff3ab54c48f4a334f53ac6c7710c 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.6E-36 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS19450 22caff3ab54c48f4a334f53ac6c7710c 159 Gene3D G3DSA:3.30.70.560 3 149 1.3E-56 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 LFZ55_RS04585 d4e4f6bcfe201968a916c34a533a7729 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 6.7E-221 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS04585 d4e4f6bcfe201968a916c34a533a7729 455 SUPERFAMILY SSF143548 16 158 1.8E-45 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS04585 d4e4f6bcfe201968a916c34a533a7729 455 Gene3D G3DSA:3.30.1330.90 10 157 3.3E-54 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS04585 d4e4f6bcfe201968a916c34a533a7729 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.8E-95 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit LFZ55_RS04585 d4e4f6bcfe201968a916c34a533a7729 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.1E-56 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS24580 91aee57ee3a55edc56c2a863c77f321c 169 Pfam PF08805 PilS N terminal 45 167 3.2E-21 T 06-07-2017 IPR014911 Type 4 secretion system, PilS, N-terminal LFZ55_RS24580 91aee57ee3a55edc56c2a863c77f321c 169 SUPERFAMILY SSF54523 43 168 1.08E-19 T 06-07-2017 LFZ55_RS24580 91aee57ee3a55edc56c2a863c77f321c 169 Gene3D G3DSA:3.30.1690.10 44 167 3.9E-23 T 06-07-2017 LFZ55_RS06765 b239b9500100edf510e6ad1e3af1d290 395 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 374 3.1E-19 T 06-07-2017 IPR025736 PucR C-terminal helix-turn-helix domain LFZ55_RS06765 b239b9500100edf510e6ad1e3af1d290 395 Gene3D G3DSA:1.10.10.60 321 352 1.0E-4 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS06765 b239b9500100edf510e6ad1e3af1d290 395 Pfam PF05651 Putative sugar diacid recognition 12 142 1.2E-51 T 06-07-2017 IPR008599 Putative sugar diacid recognition LFZ55_RS15700 fa85aabca8f005af7d7a1f877956bc08 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.246 T 06-07-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 LFZ55_RS15700 fa85aabca8f005af7d7a1f877956bc08 60 Pfam PF03966 Trm112p-like protein 2 41 1.5E-8 T 06-07-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 LFZ55_RS15700 fa85aabca8f005af7d7a1f877956bc08 60 Gene3D G3DSA:2.20.25.10 8 59 1.5E-24 T 06-07-2017 LFZ55_RS15700 fa85aabca8f005af7d7a1f877956bc08 60 SUPERFAMILY SSF158997 1 55 2.75E-20 T 06-07-2017 LFZ55_RS20160 bf8b451a608501d842b063ae01d3acfd 145 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 99 9.1E-7 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS20160 bf8b451a608501d842b063ae01d3acfd 145 Gene3D G3DSA:1.10.10.10 24 100 1.4E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20160 bf8b451a608501d842b063ae01d3acfd 145 SMART SM00862 25 102 0.0075 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS20160 bf8b451a608501d842b063ae01d3acfd 145 SUPERFAMILY SSF46894 22 99 8.22E-7 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS00155 81c7bb8acfae37f47f564498deac4010 349 Gene3D G3DSA:1.25.40.10 264 344 2.3E-23 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS00155 81c7bb8acfae37f47f564498deac4010 349 Pfam PF03918 Cytochrome C biogenesis protein 11 134 3.0E-50 T 06-07-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family LFZ55_RS00155 81c7bb8acfae37f47f564498deac4010 349 SUPERFAMILY SSF48452 222 328 8.71E-16 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS00155 81c7bb8acfae37f47f564498deac4010 349 Pfam PF14559 Tetratricopeptide repeat 237 304 4.5E-7 T 06-07-2017 LFZ55_RS00155 81c7bb8acfae37f47f564498deac4010 349 Gene3D G3DSA:1.25.40.10 219 263 3.7E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS11735 c5c67471eef62a7f020b8569a7be3306 243 Gene3D G3DSA:3.40.50.300 2 232 7.0E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11735 c5c67471eef62a7f020b8569a7be3306 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS11735 c5c67471eef62a7f020b8569a7be3306 243 SMART SM00382 28 215 6.6E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS11735 c5c67471eef62a7f020b8569a7be3306 243 SUPERFAMILY SSF52540 3 239 6.69E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11735 c5c67471eef62a7f020b8569a7be3306 243 Pfam PF00005 ABC transporter 19 167 2.8E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS05255 b1c8d1f34ac2f4065c63424709a54bf2 165 Pfam PF02464 Competence-damaged protein 8 160 2.4E-60 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS05255 b1c8d1f34ac2f4065c63424709a54bf2 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 159 3.5E-63 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS05255 b1c8d1f34ac2f4065c63424709a54bf2 165 Gene3D G3DSA:3.90.950.20 3 163 2.3E-61 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS05255 b1c8d1f34ac2f4065c63424709a54bf2 165 SUPERFAMILY SSF142433 4 161 1.96E-58 T 06-07-2017 IPR008136 CinA, C-terminal LFZ55_RS10410 0a5c1b850ce11c4a562ebcf4ad683bb4 192 Pfam PF00293 NUDIX domain 30 143 4.5E-14 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS10410 0a5c1b850ce11c4a562ebcf4ad683bb4 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 06-07-2017 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 LFZ55_RS10410 0a5c1b850ce11c4a562ebcf4ad683bb4 192 Gene3D G3DSA:3.90.79.10 21 185 1.1E-41 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS10410 0a5c1b850ce11c4a562ebcf4ad683bb4 192 SUPERFAMILY SSF55811 9 181 5.15E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS10410 0a5c1b850ce11c4a562ebcf4ad683bb4 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 49.915 T 06-07-2017 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 LFZ55_RS20835 5204cd1323893614ff179defef5e1f0e 294 Pfam PF13614 AAA domain 13 165 1.4E-19 T 06-07-2017 IPR025669 AAA domain LFZ55_RS20835 5204cd1323893614ff179defef5e1f0e 294 SUPERFAMILY SSF52540 13 282 1.03E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20835 5204cd1323893614ff179defef5e1f0e 294 Gene3D G3DSA:3.40.50.300 13 282 4.9E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 Gene3D G3DSA:1.10.10.10 136 235 8.5E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 SMART SM00448 2 112 1.6E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 SMART SM00862 157 233 6.2E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 SUPERFAMILY SSF52172 2 189 1.24E-30 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 Gene3D G3DSA:3.40.50.2300 2 127 2.0E-29 T 06-07-2017 LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 5.5E-20 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS12835 12cafc642677851f064c78e2295ec814 244 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-19 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 Gene3D G3DSA:3.40.50.360 1 147 7.4E-35 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 SUPERFAMILY SSF52218 1 148 6.2E-39 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 Pfam PF00258 Flavodoxin 6 139 2.1E-24 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 PRINTS PR00369 Flavodoxin signature 108 127 4.5E-6 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 PRINTS PR00369 Flavodoxin signature 53 64 4.5E-6 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS04620 5066c15031d8b8fa5abe022f9336c077 149 PRINTS PR00369 Flavodoxin signature 84 94 4.5E-6 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LFZ55_RS05015 3808956acd7ea4ee7bf5370724509f56 130 Gene3D G3DSA:3.30.1460.10 2 128 1.5E-41 T 06-07-2017 LFZ55_RS05015 3808956acd7ea4ee7bf5370724509f56 130 SUPERFAMILY SSF69635 2 127 1.88E-30 T 06-07-2017 LFZ55_RS05015 3808956acd7ea4ee7bf5370724509f56 130 Pfam PF05932 Tir chaperone protein (CesT) family 7 120 1.8E-6 T 06-07-2017 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 LFZ55_RS24585 900961abf19410e365abbe8828bd986c 317 Gene3D G3DSA:3.40.50.300 112 261 1.1E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24585 900961abf19410e365abbe8828bd986c 317 SUPERFAMILY SSF52540 72 263 3.91E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24585 900961abf19410e365abbe8828bd986c 317 Pfam PF00437 Type II/IV secretion system protein 67 253 7.1E-19 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS20525 b389508a1ce49cc41e1d1b49a75c48e8 78 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 78 8.0E-26 T 06-07-2017 IPR009885 Protein of unknown function DUF1435 LFZ55_RS20525 b389508a1ce49cc41e1d1b49a75c48e8 78 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 7.4E-31 T 06-07-2017 IPR009885 Protein of unknown function DUF1435 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 Gene3D G3DSA:3.20.20.70 1 250 1.1E-91 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 SUPERFAMILY SSF51569 1 250 6.96E-82 T 06-07-2017 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 1.1E-69 T 06-07-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 42.837 T 06-07-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 2.1E-81 T 06-07-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LFZ55_RS13410 932a0d18df26a1449903c70abe1bb093 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 06-07-2017 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 PIRSF PIRSF006076 1 805 1.3E-259 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 805 26.324 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Pfam PF01103 Surface antigen 448 805 7.8E-105 T 06-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Pfam PF07244 Surface antigen variable number repeat 266 344 2.4E-12 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Pfam PF07244 Surface antigen variable number repeat 176 263 1.9E-16 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Pfam PF07244 Surface antigen variable number repeat 348 421 4.3E-14 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Pfam PF07244 Surface antigen variable number repeat 92 172 6.5E-11 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 805 4.5E-288 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Gene3D G3DSA:2.40.160.50 700 802 1.5E-21 T 06-07-2017 LFZ55_RS19270 22a01a7b17ffbe5d8b34655c741b841e 805 Gene3D G3DSA:2.40.160.50 395 664 1.5E-21 T 06-07-2017 LFZ55_RS16495 ef15195761adf7411d98f728073d833d 308 SUPERFAMILY SSF53335 43 295 5.85E-28 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16495 ef15195761adf7411d98f728073d833d 308 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 298 53.682 T 06-07-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LFZ55_RS16495 ef15195761adf7411d98f728073d833d 308 Gene3D G3DSA:3.40.50.150 71 202 1.4E-9 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS16495 ef15195761adf7411d98f728073d833d 308 Pfam PF05971 Protein of unknown function (DUF890) 3 296 2.1E-147 T 06-07-2017 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 LFZ55_RS16495 ef15195761adf7411d98f728073d833d 308 PIRSF PIRSF029038 1 308 7.9E-148 T 06-07-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LFZ55_RS20495 8f339473cab7b9db6e2f0bf5a1c8ef1c 148 Pfam PF00583 Acetyltransferase (GNAT) family 48 120 1.3E-17 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS20495 8f339473cab7b9db6e2f0bf5a1c8ef1c 148 Gene3D G3DSA:3.40.630.30 3 147 7.7E-34 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS20495 8f339473cab7b9db6e2f0bf5a1c8ef1c 148 SUPERFAMILY SSF55729 3 146 3.88E-32 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS20495 8f339473cab7b9db6e2f0bf5a1c8ef1c 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 2.8E-45 T 06-07-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LFZ55_RS14150 154275581296844c6f0c4c732244424b 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 7.3E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS14150 154275581296844c6f0c4c732244424b 259 SUPERFAMILY SSF161098 3 254 1.96E-55 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS14150 154275581296844c6f0c4c732244424b 259 Gene3D G3DSA:1.10.3720.10 5 256 5.5E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS23925 f5bbf466a1ada8dd03269871be674330 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 8.2E-19 T 06-07-2017 IPR012567 IlvGEDA operon leader peptide GO:0009082 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 SUPERFAMILY SSF48452 23 126 3.8E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 SMART SM00028 58 91 2.4 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 SMART SM00028 24 57 320.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 SMART SM00028 92 125 50.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 16 142 1.2E-41 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 LFZ55_RS13210 c5733b9e7205cd0f39e6992fe3c0a0a6 144 Gene3D G3DSA:1.25.40.10 23 134 2.4E-16 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS24940 9c6a383fd80e1f0468c75a555e919f9f 246 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 15 241 3.9E-87 T 06-07-2017 IPR014126 Type-F conjugative transfer system secretin TraK LFZ55_RS24940 9c6a383fd80e1f0468c75a555e919f9f 246 Pfam PF06586 TraK protein 26 238 7.0E-48 T 06-07-2017 IPR010563 Pilus assembly TraK LFZ55_RS10495 1acbe852f14febeffa8af404450f3adc 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 1 54 3.3E-33 T 06-07-2017 IPR012563 Gns LFZ55_RS03960 d19b7075320aea4e9d1b0d0477e7de5d 192 Pfam PF12822 Protein of unknown function (DUF3816) 10 173 1.5E-11 T 06-07-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Gene3D G3DSA:3.40.47.10 276 391 4.4E-66 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Gene3D G3DSA:3.40.47.10 142 193 4.4E-66 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 06-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 SUPERFAMILY SSF53901 3 269 9.39E-80 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 06-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Gene3D G3DSA:3.40.47.10 3 123 4.8E-73 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Gene3D G3DSA:3.40.47.10 194 275 4.8E-73 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.9E-141 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 2.3E-52 T 06-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 SUPERFAMILY SSF53901 271 391 9.41E-43 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 PIRSF PIRSF000429 1 392 2.8E-129 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 06-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LFZ55_RS04320 d14f0835d825639ace295f3d61c1119c 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 6.5E-101 T 06-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 Gene3D G3DSA:3.40.50.1980 124 294 1.4E-61 T 06-07-2017 LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 2.8E-59 T 06-07-2017 IPR008091 Ferrichrome-binding periplasmic protein LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 SUPERFAMILY SSF53807 34 292 3.85E-57 T 06-07-2017 LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 Gene3D G3DSA:3.40.50.1980 34 120 1.1E-32 T 06-07-2017 LFZ55_RS19400 d9a39ecbfa661b9f3b8e8f72d3461086 296 Pfam PF01497 Periplasmic binding protein 38 270 7.1E-26 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LFZ55_RS15865 2818dc88a7df11a8aa51f548ac113846 234 SUPERFAMILY SSF55729 2 229 4.87E-93 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15865 2818dc88a7df11a8aa51f548ac113846 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 212 7.3E-84 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LFZ55_RS15865 2818dc88a7df11a8aa51f548ac113846 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.381 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LFZ55_RS15865 2818dc88a7df11a8aa51f548ac113846 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 1.9E-71 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 6.4E-93 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 SUPERFAMILY SSF75217 75 242 3.09E-51 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 Pfam PF04452 RNA methyltransferase 19 236 2.9E-72 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 Gene3D G3DSA:3.40.1280.10 75 242 5.1E-59 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 Gene3D G3DSA:2.40.240.20 1 70 1.1E-28 T 06-07-2017 LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 SUPERFAMILY SSF88697 2 68 1.64E-17 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS03855 77b021a233b4aae25ce3629a4907b2ea 243 PIRSF PIRSF015601 2 242 1.3E-51 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LFZ55_RS21495 cbf9484841b1edbd0de0ea9951f5ed7c 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 7.5E-71 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS21495 cbf9484841b1edbd0de0ea9951f5ed7c 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 7.2E-68 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS21495 cbf9484841b1edbd0de0ea9951f5ed7c 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.962 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS21495 cbf9484841b1edbd0de0ea9951f5ed7c 212 SUPERFAMILY SSF55068 5 208 1.27E-85 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS21495 cbf9484841b1edbd0de0ea9951f5ed7c 212 Gene3D G3DSA:3.30.1060.10 7 199 4.1E-82 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LFZ55_RS13440 e794dc1803432993f771eab1739f1293 236 SUPERFAMILY SSF141868 12 234 1.18E-10 T 06-07-2017 IPR001633 EAL domain LFZ55_RS13440 e794dc1803432993f771eab1739f1293 236 Pfam PF00563 EAL domain 12 223 1.3E-8 T 06-07-2017 IPR001633 EAL domain LFZ55_RS13440 e794dc1803432993f771eab1739f1293 236 Gene3D G3DSA:3.20.20.450 109 235 1.8E-7 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18315 eb183ed7266b3b14ea94a2df78024d59 103 SUPERFAMILY SSF55781 6 100 3.2E-5 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS18315 eb183ed7266b3b14ea94a2df78024d59 103 Gene3D G3DSA:3.30.450.40 6 96 5.0E-6 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 Pfam PF01476 LysM domain 99 147 3.2E-12 T 06-07-2017 IPR018392 LysM domain LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 Gene3D G3DSA:3.10.350.10 97 148 1.5E-11 T 06-07-2017 IPR018392 LysM domain LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 SMART SM00749 28 91 1.8E-9 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 SUPERFAMILY SSF54106 97 147 1.16E-7 T 06-07-2017 IPR018392 LysM domain LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 SMART SM00257 98 147 2.7E-13 T 06-07-2017 IPR018392 LysM domain LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 Gene3D G3DSA:3.30.70.100 28 71 6.8E-4 T 06-07-2017 LFZ55_RS05450 c1c4b9ce0d2b1501f705243a3194a8bb 149 Pfam PF04972 BON domain 24 89 4.0E-10 T 06-07-2017 IPR007055 BON domain LFZ55_RS17975 78cd1d7644b60bbafa008db44329ba18 406 Gene3D G3DSA:1.20.1250.20 27 195 6.0E-20 T 06-07-2017 LFZ55_RS17975 78cd1d7644b60bbafa008db44329ba18 406 Gene3D G3DSA:1.20.1250.20 222 401 9.0E-21 T 06-07-2017 LFZ55_RS17975 78cd1d7644b60bbafa008db44329ba18 406 SUPERFAMILY SSF103473 20 401 1.19E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS17975 78cd1d7644b60bbafa008db44329ba18 406 Pfam PF07690 Major Facilitator Superfamily 31 265 3.7E-24 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS01835 98fdc6053262f4e3e3773f6bf19a507d 200 SUPERFAMILY SSF140931 41 197 9.55E-29 T 06-07-2017 IPR003812 Fido domain LFZ55_RS01835 98fdc6053262f4e3e3773f6bf19a507d 200 Pfam PF02661 Fic/DOC family 58 152 4.2E-14 T 06-07-2017 IPR003812 Fido domain LFZ55_RS01835 98fdc6053262f4e3e3773f6bf19a507d 200 Gene3D G3DSA:1.10.3290.10 11 198 7.4E-53 T 06-07-2017 IPR003812 Fido domain LFZ55_RS11120 52350464269e59ac101dcddf8617e297 168 Gene3D G3DSA:1.20.1260.10 3 160 5.9E-52 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS11120 52350464269e59ac101dcddf8617e297 168 SUPERFAMILY SSF47240 2 155 1.3E-46 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS11120 52350464269e59ac101dcddf8617e297 168 Pfam PF05974 Domain of unknown function (DUF892) 4 156 1.2E-48 T 06-07-2017 IPR010287 Domain of unknown function DUF892 LFZ55_RS01080 912b2a2673cfd9157986d37a129f1743 63 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 63 5.9E-34 T 06-07-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT LFZ55_RS01080 912b2a2673cfd9157986d37a129f1743 63 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 4.9E-31 T 06-07-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT LFZ55_RS01080 912b2a2673cfd9157986d37a129f1743 63 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 1.0E-28 T 06-07-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT LFZ55_RS12220 f3b8bf3ce73e6de9edb1a777bdb39a06 261 Pfam PF06884 Protein of unknown function (DUF1264) 52 216 9.5E-71 T 06-07-2017 IPR010686 Oil body-associated protein-like LFZ55_RS23635 b4663ce7547c911edb80e8920ebf0d09 338 Gene3D G3DSA:3.40.50.1820 48 328 2.7E-25 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23635 b4663ce7547c911edb80e8920ebf0d09 338 SUPERFAMILY SSF53474 33 167 7.22E-31 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23635 b4663ce7547c911edb80e8920ebf0d09 338 SUPERFAMILY SSF53474 250 328 7.22E-31 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23635 b4663ce7547c911edb80e8920ebf0d09 338 Pfam PF12146 Serine aminopeptidase, S33 53 312 1.9E-55 T 06-07-2017 IPR022742 Serine aminopeptidase, S33 LFZ55_RS09365 36356a948743449db589d26039d0b905 297 PIRSF PIRSF021898 1 292 7.4E-109 T 06-07-2017 IPR016797 Uncharacterised conserved protein UCP021898 LFZ55_RS09365 36356a948743449db589d26039d0b905 297 SUPERFAMILY SSF51556 141 290 2.62E-7 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS09365 36356a948743449db589d26039d0b905 297 SUPERFAMILY SSF51556 17 106 2.62E-7 T 06-07-2017 IPR032466 Metal-dependent hydrolase LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 06-07-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 Gene3D G3DSA:3.20.20.70 1 292 3.9E-118 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.5E-125 T 06-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 PIRSF PIRSF001365 1 292 1.6E-97 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 SUPERFAMILY SSF51569 1 292 2.2E-100 T 06-07-2017 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.6E-122 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.0E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.0E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.0E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.0E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 06-07-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 SMART SM01130 1 290 5.4E-142 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS06790 992db5588f2c354db46371e6497b706c 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.779 T 06-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS01790 b61f504898647542f7b1ee4760379372 56 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 3.0E-34 T 06-07-2017 IPR025318 Protein of unknown function DUF4223 LFZ55_RS01880 4cb937aad85cfc9e2ce4ff5106c5121a 103 SUPERFAMILY SSF54909 5 98 1.25E-34 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS01880 4cb937aad85cfc9e2ce4ff5106c5121a 103 Pfam PF08803 Putative mono-oxygenase ydhR 5 99 4.7E-42 T 06-07-2017 IPR014910 Putative monooxygenase YdhR LFZ55_RS09675 2755671e3f7dc988eb1edf4cc398737a 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.6E-38 T 06-07-2017 IPR019705 Protein of unknown function DUF2594 LFZ55_RS20695 e6a01cc9ffdeeea193d092aea79e4127 176 Pfam PF05638 Type VI secretion system effector, Hcp 33 155 2.3E-28 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS20695 e6a01cc9ffdeeea193d092aea79e4127 176 Gene3D G3DSA:2.30.110.20 32 157 3.1E-35 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS20695 e6a01cc9ffdeeea193d092aea79e4127 176 SUPERFAMILY SSF141452 30 158 3.4E-32 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 Gene3D G3DSA:3.10.105.10 322 560 3.1E-46 T 06-07-2017 LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 506 2.8E-69 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 SUPERFAMILY SSF53850 51 592 3.08E-108 T 06-07-2017 LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 Gene3D G3DSA:3.90.76.10 92 175 6.9E-13 T 06-07-2017 LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 PIRSF PIRSF002741 4 594 8.1E-166 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LFZ55_RS08145 52a960cc13cb88e951741bedaea13d89 603 Gene3D G3DSA:3.40.190.10 176 321 3.7E-30 T 06-07-2017 LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 SUPERFAMILY SSF52540 253 487 1.12E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 Gene3D G3DSA:3.40.50.300 11 240 2.7E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 Gene3D G3DSA:3.40.50.300 263 497 1.1E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 Pfam PF00005 ABC transporter 280 434 1.5E-17 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 Pfam PF00005 ABC transporter 29 178 2.2E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 SUPERFAMILY SSF52540 12 236 9.69E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 SMART SM00382 288 483 0.62 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 SMART SM00382 38 233 1.2E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08325 b3619af227429c1b580d53a9783b5a5e 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22060 be7b9c3ab81b00c6916a4c553be362a9 317 SUPERFAMILY SSF50956 60 300 2.75E-37 T 06-07-2017 LFZ55_RS22060 be7b9c3ab81b00c6916a4c553be362a9 317 Gene3D G3DSA:2.120.10.30 75 289 1.2E-6 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like LFZ55_RS22060 be7b9c3ab81b00c6916a4c553be362a9 317 Pfam PF06977 SdiA-regulated 55 295 1.3E-85 T 06-07-2017 IPR009722 SdiA-regulated LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.512 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 Gene3D G3DSA:3.40.1190.20 1 302 1.9E-90 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.1E-64 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 PRINTS PR00990 Ribokinase signature 32 51 1.7E-29 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 PRINTS PR00990 Ribokinase signature 5 26 1.7E-29 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 PRINTS PR00990 Ribokinase signature 173 188 1.7E-29 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 PRINTS PR00990 Ribokinase signature 104 117 1.7E-29 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 PRINTS PR00990 Ribokinase signature 217 228 1.7E-29 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 1.5E-112 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS00270 f179326c7b680c05b08d7c2ad546a152 306 SUPERFAMILY SSF53613 1 301 1.17E-81 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS12935 cbd9442de9ca07848eb91a55e7fc28f5 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.997 T 06-07-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 LFZ55_RS12935 cbd9442de9ca07848eb91a55e7fc28f5 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 5.6E-109 T 06-07-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 LFZ55_RS12935 cbd9442de9ca07848eb91a55e7fc28f5 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 8.1E-148 T 06-07-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 LFZ55_RS09645 a897d4e1d1636240155d9b2b931edc61 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 166 5.1E-16 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LFZ55_RS09645 a897d4e1d1636240155d9b2b931edc61 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 166 1.7E-87 T 06-07-2017 IPR022523 Flagellar regulator, FliZ LFZ55_RS08460 6316d6f41aa84ea4e4ab6e4e006c93c8 243 Gene3D G3DSA:1.10.3720.10 8 240 1.3E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08460 6316d6f41aa84ea4e4ab6e4e006c93c8 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 238 3.5E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08460 6316d6f41aa84ea4e4ab6e4e006c93c8 243 SUPERFAMILY SSF161098 46 233 9.94E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24625 753134b80b81c938c9b2722a80ff7da3 260 SUPERFAMILY SSF56349 42 233 3.24E-27 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LFZ55_RS24625 753134b80b81c938c9b2722a80ff7da3 260 PIRSF PIRSF004576 1 258 5.0E-114 T 06-07-2017 IPR016423 Resolvase, Rsv LFZ55_RS24625 753134b80b81c938c9b2722a80ff7da3 260 Pfam PF00589 Phage integrase family 42 233 7.0E-46 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS24625 753134b80b81c938c9b2722a80ff7da3 260 Gene3D G3DSA:1.10.443.10 43 234 2.3E-29 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS23460 107221fdfe2e82c6f1905b5e32cd6b20 302 Pfam PF01553 Acyltransferase 75 213 4.6E-13 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS23460 107221fdfe2e82c6f1905b5e32cd6b20 302 SMART SM00563 88 215 2.2E-18 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS23460 107221fdfe2e82c6f1905b5e32cd6b20 302 SUPERFAMILY SSF69593 47 289 5.36E-27 T 06-07-2017 LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 Gene3D G3DSA:3.90.1720.10 319 438 4.3E-13 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 Pfam PF12913 SH3 domain (SH3b1 type) 179 231 2.3E-23 T 06-07-2017 LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 Pfam PF00877 NlpC/P60 family 336 420 8.6E-6 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 PIRSF PIRSF019015 31 479 2.8E-144 T 06-07-2017 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 Pfam PF12914 SH3 domain of SH3b2 type 239 284 2.2E-9 T 06-07-2017 IPR026864 SH3b2-type SH3 domain LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 SUPERFAMILY SSF54001 316 434 1.47E-12 T 06-07-2017 LFZ55_RS09725 2d74370aef5bdb4e1b51a5532c585443 479 Pfam PF12912 NLPC_P60 stabilising domain, N term 10 149 2.3E-9 T 06-07-2017 IPR025606 NLPC/P60, N-terminal domain LFZ55_RS16875 c7fd70ca0decd2fba3460690952fc8c4 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 5.3E-20 T 06-07-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 LFZ55_RS16875 c7fd70ca0decd2fba3460690952fc8c4 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 7.9E-15 T 06-07-2017 IPR012994 Membrane bound YbgT-like LFZ55_RS13950 ceac5de0495ea75f30c69d5ccb298a51 270 SUPERFAMILY SSF161098 65 256 4.84E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS13950 ceac5de0495ea75f30c69d5ccb298a51 270 Gene3D G3DSA:1.10.3720.10 61 262 1.3E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS13950 ceac5de0495ea75f30c69d5ccb298a51 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 9.4E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07085 f7dc168125e7ff2b8fdf089d3c9e6ce8 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.98 T 06-07-2017 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 LFZ55_RS07085 f7dc168125e7ff2b8fdf089d3c9e6ce8 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 2.9E-42 T 06-07-2017 LFZ55_RS13560 e1a77ff6f2cd981304a062b95fcc4ddb 178 Pfam PF14002 YniB-like protein 15 177 4.3E-79 T 06-07-2017 IPR025229 YniB-like protein LFZ55_RS13560 e1a77ff6f2cd981304a062b95fcc4ddb 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 7.0E-92 T 06-07-2017 LFZ55_RS22780 7a17303eb09afe6d404dac0059dcf23f 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.0E-106 T 06-07-2017 LFZ55_RS22780 7a17303eb09afe6d404dac0059dcf23f 256 SUPERFAMILY SSF110399 1 233 1.26E-79 T 06-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 LFZ55_RS22780 7a17303eb09afe6d404dac0059dcf23f 256 Gene3D G3DSA:3.20.20.70 1 253 5.4E-60 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS22780 7a17303eb09afe6d404dac0059dcf23f 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.29 T 06-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 LFZ55_RS01355 43016c1cdf4c68ec466eb5c4c23929a4 405 SUPERFAMILY SSF103473 17 395 4.45E-45 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS01355 43016c1cdf4c68ec466eb5c4c23929a4 405 Gene3D G3DSA:1.20.1250.20 18 199 1.5E-16 T 06-07-2017 LFZ55_RS01355 43016c1cdf4c68ec466eb5c4c23929a4 405 Gene3D G3DSA:1.20.1250.20 219 395 5.1E-18 T 06-07-2017 LFZ55_RS01355 43016c1cdf4c68ec466eb5c4c23929a4 405 Pfam PF07690 Major Facilitator Superfamily 25 301 2.7E-13 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 8.2E-12 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 SUPERFAMILY SSF52833 14 88 1.03E-16 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 SUPERFAMILY SSF47616 91 208 1.33E-10 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 Gene3D G3DSA:1.20.1050.10 100 212 2.3E-45 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 Gene3D G3DSA:3.40.30.10 13 99 5.1E-20 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS07520 bcec448d1488b5ff0504ec1e4d876c15 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 5.1E-64 T 06-07-2017 LFZ55_RS03205 d224214d44c93c92bb61265be55a3ab2 487 PIRSF PIRSF002457 2 487 1.0E-130 T 06-07-2017 IPR030676 Citrate carrier CitT-related LFZ55_RS03205 d224214d44c93c92bb61265be55a3ab2 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 4.6E-166 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS03205 d224214d44c93c92bb61265be55a3ab2 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 486 1.7E-180 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS20190 b1830cc0433b12de43f738ca5beb4f40 172 SUPERFAMILY SSF49401 25 172 3.28E-39 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS20190 b1830cc0433b12de43f738ca5beb4f40 172 Pfam PF00419 Fimbrial protein 27 171 1.3E-23 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS20190 b1830cc0433b12de43f738ca5beb4f40 172 Gene3D G3DSA:2.60.40.1090 23 172 1.6E-45 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS00960 4e9808c3ef3670976c74e8b0e8564c7d 236 Pfam PF11254 Protein of unknown function (DUF3053) 14 230 6.3E-89 T 06-07-2017 IPR021413 Protein of unknown function DUF3053 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 Gene3D G3DSA:3.40.50.1000 9 89 4.8E-35 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 Gene3D G3DSA:3.40.50.1000 180 264 4.8E-35 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 Hamap MF_00617 Mannosyl-3-phosphoglycerate phosphatase [mngB]. 6 253 36.502 T 06-07-2017 IPR012815 Mannosyl-3-phosphoglycerate phosphatase GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 SUPERFAMILY SSF56784 6 232 3.27E-43 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 3.2E-12 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 9 20 - T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 267 1.9E-91 T 06-07-2017 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 Gene3D G3DSA:3.30.980.20 94 179 1.9E-37 T 06-07-2017 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 1.9E-40 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS09500 f3ebcdc63d062d94b96d71ac75db7451 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 2.2E-100 T 06-07-2017 LFZ55_RS07100 06476754f9ddceb67241770b7609deda 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 3.0E-25 T 06-07-2017 IPR024530 Putative quorum-sensing-regulated virulence factor LFZ55_RS07100 06476754f9ddceb67241770b7609deda 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 1.6E-28 T 06-07-2017 IPR024530 Putative quorum-sensing-regulated virulence factor LFZ55_RS23690 37788d329543336e2ec7c9014349d159 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 2.3E-15 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23690 37788d329543336e2ec7c9014349d159 238 Gene3D G3DSA:3.40.50.1000 106 238 1.7E-28 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23690 37788d329543336e2ec7c9014349d159 238 Gene3D G3DSA:3.40.50.1000 10 68 2.2E-4 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23690 37788d329543336e2ec7c9014349d159 238 SUPERFAMILY SSF56784 10 238 2.58E-40 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS23690 37788d329543336e2ec7c9014349d159 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 201 1.9E-11 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 Gene3D G3DSA:3.30.420.10 3 157 1.1E-67 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 SUPERFAMILY SSF53098 3 156 9.29E-57 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.0E-68 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 06-07-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 4.5E-87 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS09945 ef0eb8bda9d26c9b86bc9ec5a616b05e 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.975 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LFZ55_RS16440 7603f51926e01f2670463741e79d4cb8 370 Pfam PF03600 Citrate transporter 25 306 7.7E-25 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LFZ55_RS04455 49a00f479d27ff2f494f2faa577b53d6 106 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 3.5E-6 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS04455 49a00f479d27ff2f494f2faa577b53d6 106 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.4E-24 T 06-07-2017 IPR022204 Prepilin peptidase dependent protein C LFZ55_RS04455 49a00f479d27ff2f494f2faa577b53d6 106 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 8.6E-7 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS04455 49a00f479d27ff2f494f2faa577b53d6 106 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS00520 d70f249c85b10d297e3069893bb3592a 229 Gene3D G3DSA:3.40.1280.10 2 174 6.6E-49 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LFZ55_RS00520 d70f249c85b10d297e3069893bb3592a 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.1E-24 T 06-07-2017 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 LFZ55_RS00520 d70f249c85b10d297e3069893bb3592a 229 SUPERFAMILY SSF75217 4 184 2.22E-49 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases LFZ55_RS00520 d70f249c85b10d297e3069893bb3592a 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.789 T 06-07-2017 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 LFZ55_RS00520 d70f249c85b10d297e3069893bb3592a 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.6E-36 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LFZ55_RS12300 64143c130bad6bce94d7021af341e500 149 Gene3D G3DSA:3.10.450.40 34 118 3.0E-10 T 06-07-2017 LFZ55_RS12300 64143c130bad6bce94d7021af341e500 149 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 115 7.0E-23 T 06-07-2017 IPR017737 Type VI secretion system, lysozyme-related protein LFZ55_RS12300 64143c130bad6bce94d7021af341e500 149 SUPERFAMILY SSF160719 32 121 1.83E-17 T 06-07-2017 LFZ55_RS12300 64143c130bad6bce94d7021af341e500 149 Pfam PF04965 Gene 25-like lysozyme 34 115 2.9E-11 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD LFZ55_RS15390 13dc6cd7adf478536db7db1b999e2b54 186 Pfam PF14018 Domain of unknown function (DUF4234) 16 115 4.3E-11 T 06-07-2017 IPR025328 Domain of unknown function DUF4234 LFZ55_RS05240 03f4c94585039adae6b9be9082028f3a 323 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 230 322 2.2E-42 T 06-07-2017 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 LFZ55_RS05240 03f4c94585039adae6b9be9082028f3a 323 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 323 5.3E-187 T 06-07-2017 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 LFZ55_RS05240 03f4c94585039adae6b9be9082028f3a 323 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 175 9.2E-70 T 06-07-2017 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 LFZ55_RS17460 9023db0ffd0d6437d6bada5927195c70 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 234 1.7E-82 T 06-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LFZ55_RS17460 9023db0ffd0d6437d6bada5927195c70 302 PIRSF PIRSF015582 1 302 4.9E-75 T 06-07-2017 IPR011206 Citrate lyase beta subunit-like LFZ55_RS17460 9023db0ffd0d6437d6bada5927195c70 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 12 299 2.4E-134 T 06-07-2017 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 LFZ55_RS17460 9023db0ffd0d6437d6bada5927195c70 302 SUPERFAMILY SSF51621 11 244 3.14E-61 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS17460 9023db0ffd0d6437d6bada5927195c70 302 Gene3D G3DSA:3.20.20.60 9 245 2.0E-73 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS13250 f3fc3a4f24fb77600d424e0e3269026a 403 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 12 400 1.8E-93 T 06-07-2017 IPR012843 Type III secretion system YscD/HrpQ LFZ55_RS13250 f3fc3a4f24fb77600d424e0e3269026a 403 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 152 390 1.4E-12 T 06-07-2017 IPR032034 Yop protein translocation protein D, periplasmic domain LFZ55_RS05140 6eb0ef572d2a558266cffc436e91d5a3 118 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.87 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS05140 6eb0ef572d2a558266cffc436e91d5a3 118 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 06-07-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site LFZ55_RS05140 6eb0ef572d2a558266cffc436e91d5a3 118 PIRSF PIRSF004761 1 117 9.9E-36 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS05140 6eb0ef572d2a558266cffc436e91d5a3 118 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 114 2.8E-41 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS05140 6eb0ef572d2a558266cffc436e91d5a3 118 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 1.9E-29 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 LFZ55_RS05730 886ab75f212b1a16d8988c27b714ed9c 158 Gene3D G3DSA:3.30.530.20 14 155 2.3E-49 T 06-07-2017 IPR023393 START-like domain LFZ55_RS05730 886ab75f212b1a16d8988c27b714ed9c 158 SUPERFAMILY SSF55961 14 156 2.33E-34 T 06-07-2017 LFZ55_RS05730 886ab75f212b1a16d8988c27b714ed9c 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 1.0E-32 T 06-07-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 Pfam PF01782 RimM N-terminal domain 16 97 2.9E-27 T 06-07-2017 IPR002676 RimM protein GO:0006364 LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 Gene3D G3DSA:2.30.30.240 106 182 1.4E-29 T 06-07-2017 LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 Pfam PF05239 PRC-barrel domain 104 177 3.2E-9 T 06-07-2017 IPR027275 PRC-barrel domain LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 SUPERFAMILY SSF50447 13 99 4.94E-25 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.954 T 06-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.6E-62 T 06-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 SUPERFAMILY SSF50346 106 182 9.22E-20 T 06-07-2017 IPR011033 PRC-barrel-like LFZ55_RS05790 4ef40ee6ce8737acaf06042d223dc21e 182 Gene3D G3DSA:2.40.30.60 6 100 5.8E-37 T 06-07-2017 IPR002676 RimM protein GO:0006364 LFZ55_RS18520 d534fa950958b40895a410d7048ebd91 88 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 3 87 9.8E-30 T 06-07-2017 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 LFZ55_RS18520 d534fa950958b40895a410d7048ebd91 88 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 3 88 29.562 T 06-07-2017 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 Pfam PF02810 SEC-C motif 134 152 6.2E-11 T 06-07-2017 IPR004027 SEC-C motif LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 Pfam PF02810 SEC-C motif 2 19 2.8E-5 T 06-07-2017 IPR004027 SEC-C motif LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 Gene3D G3DSA:3.10.450.50 2 152 4.1E-56 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 SUPERFAMILY SSF103642 132 151 2.94E-8 T 06-07-2017 LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 SUPERFAMILY SSF54427 25 129 2.05E-36 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS10990 0acaebc3d0fbe59a985a8f45970d8753 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 29.561 T 06-07-2017 IPR023006 Uncharacterised protein family UPF0225 LFZ55_RS10500 6c4fd44f2d519a48b6379bfb9b311d94 113 Gene3D G3DSA:2.60.120.10 2 112 1.8E-43 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS10500 6c4fd44f2d519a48b6379bfb9b311d94 113 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 1.3E-26 T 06-07-2017 IPR015392 Domain of unknown function DUF1971 LFZ55_RS10500 6c4fd44f2d519a48b6379bfb9b311d94 113 SUPERFAMILY SSF51197 4 102 7.69E-32 T 06-07-2017 LFZ55_RS10500 6c4fd44f2d519a48b6379bfb9b311d94 113 PIRSF PIRSF020632 3 112 2.0E-63 T 06-07-2017 IPR014510 Tellurite resistance predicted, YeaR LFZ55_RS10085 869d846a5d835ff67826e61eee20dd36 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 161 185 - T 06-07-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 LFZ55_RS10085 869d846a5d835ff67826e61eee20dd36 331 Pfam PF00872 Transposase, Mutator family 3 306 1.8E-99 T 06-07-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.7 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 SUPERFAMILY SSF46946 2 114 1.65E-45 T 06-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 06-07-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 Gene3D G3DSA:4.10.910.10 72 118 8.3E-28 T 06-07-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 PIRSF PIRSF002134 1 118 1.0E-41 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-34 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 Gene3D G3DSA:1.10.8.50 2 71 1.3E-27 T 06-07-2017 LFZ55_RS02150 f761396ad9821a55bcd1b1e5aba2ed26 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.6E-53 T 06-07-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS00280 0db29fde38a473a10ac3fba888dc9a92 337 SUPERFAMILY SSF74650 39 334 5.65E-8 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS00280 0db29fde38a473a10ac3fba888dc9a92 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 335 5.4E-15 T 06-07-2017 IPR027839 Protein of unknown function DUF4432 LFZ55_RS01950 c3c0455652534f64a27e3a0c8f43a22a 196 SUPERFAMILY SSF54534 2 140 1.1E-33 T 06-07-2017 LFZ55_RS01950 c3c0455652534f64a27e3a0c8f43a22a 196 Gene3D G3DSA:3.10.50.40 2 80 5.2E-16 T 06-07-2017 LFZ55_RS01950 c3c0455652534f64a27e3a0c8f43a22a 196 Gene3D G3DSA:3.10.50.40 126 141 5.2E-16 T 06-07-2017 LFZ55_RS01950 c3c0455652534f64a27e3a0c8f43a22a 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.5E-9 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LFZ55_RS15215 c08240d24a38c3219f11ceabe6fed8cd 289 Pfam PF06054 Competence protein CoiA-like family 29 68 5.2E-5 T 06-07-2017 IPR010330 Competence-induced protein CoiA-like LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 SUPERFAMILY SSF53254 1 198 8.34E-54 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 5.2E-59 T 06-07-2017 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 PIRSF PIRSF000709 1 179 4.6E-13 T 06-07-2017 LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 2.7E-52 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 06-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 Gene3D G3DSA:3.40.50.1240 1 196 4.6E-54 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS17350 8534f20a2b0ab3779b9c0ddfbc39b995 202 SMART SM00855 2 156 2.4E-20 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 SUPERFAMILY SSF52540 24 251 4.46E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 SUPERFAMILY SSF50447 244 328 3.53E-22 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.211 T 06-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 SUPERFAMILY SSF50465 336 435 9.71E-30 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 Gene3D G3DSA:3.40.50.300 22 235 9.8E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 Gene3D G3DSA:2.40.30.10 244 355 6.9E-16 T 06-07-2017 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 3.5E-208 T 06-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.2E-43 T 06-07-2017 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 4.7E-14 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.3E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.3E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.3E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.3E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS04780 acda3098d7c93a054533b38c975b7837 479 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.3E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LFZ55_RS02830 3ef92913dfc4598528634888a91b42e0 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 327 1.4E-134 T 06-07-2017 IPR019949 Luciferase family oxidoreductase, group 1 LFZ55_RS02830 3ef92913dfc4598528634888a91b42e0 335 Pfam PF00296 Luciferase-like monooxygenase 8 302 3.1E-35 T 06-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LFZ55_RS02830 3ef92913dfc4598528634888a91b42e0 335 Gene3D G3DSA:3.20.20.30 2 326 1.2E-91 T 06-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LFZ55_RS02830 3ef92913dfc4598528634888a91b42e0 335 SUPERFAMILY SSF51679 6 327 9.42E-87 T 06-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LFZ55_RS01370 031116123e1f581142a41cac317ed4be 81 Gene3D G3DSA:3.30.110.40 6 79 2.9E-30 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS01370 031116123e1f581142a41cac317ed4be 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.521 T 06-07-2017 IPR022931 Sulphurtransferase TusA GO:0016783 LFZ55_RS01370 031116123e1f581142a41cac317ed4be 81 SUPERFAMILY SSF64307 5 79 1.44E-26 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS01370 031116123e1f581142a41cac317ed4be 81 Pfam PF01206 Sulfurtransferase TusA 10 79 2.1E-24 T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS01370 031116123e1f581142a41cac317ed4be 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 06-07-2017 IPR001455 TusA-like domain LFZ55_RS07850 0c0e63be2ffa5429ea9e183475228496 376 SUPERFAMILY SSF47240 3 340 6.5E-117 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS07850 0c0e63be2ffa5429ea9e183475228496 376 Gene3D G3DSA:1.10.620.20 3 340 1.6E-128 T 06-07-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 LFZ55_RS07850 0c0e63be2ffa5429ea9e183475228496 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 3.1E-50 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS07850 0c0e63be2ffa5429ea9e183475228496 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 06-07-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 5.7E-189 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 74.213 T 06-07-2017 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 4.4E-171 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 Gene3D G3DSA:1.20.5.570 458 491 3.3E-20 T 06-07-2017 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 SUPERFAMILY SSF143968 326 489 1.83E-66 T 06-07-2017 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 Gene3D G3DSA:3.40.1670.10 340 457 1.9E-55 T 06-07-2017 LFZ55_RS23550 b26a8833dfacc00f1791353fa41416af 492 SUPERFAMILY SSF50475 6 325 4.71E-128 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LFZ55_RS23830 cd586fd4dc3f78610e7f3533a1ef52d4 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 9.1E-171 T 06-07-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 LFZ55_RS23830 cd586fd4dc3f78610e7f3533a1ef52d4 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.047 T 06-07-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 LFZ55_RS23830 cd586fd4dc3f78610e7f3533a1ef52d4 367 Pfam PF00953 Glycosyl transferase family 4 76 232 1.8E-28 T 06-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 LFZ55_RS03025 a886fa6432731d28537e3045e3178c93 436 PIRSF PIRSF006054 5 435 2.5E-173 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 LFZ55_RS03025 a886fa6432731d28537e3045e3178c93 436 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 34.71 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 LFZ55_RS03025 a886fa6432731d28537e3045e3178c93 436 Pfam PF03313 Serine dehydratase alpha chain 193 428 3.3E-45 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit LFZ55_RS23700 c1f0162c5ec1a038418d4e72ad0a5512 235 Pfam PF04340 Protein of unknown function, DUF484 10 232 5.6E-84 T 06-07-2017 IPR007435 Protein of unknown function DUF484 LFZ55_RS15450 f87de81b7654f8240b6195f440cdd54e 74 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 5 62 2.2E-22 T 06-07-2017 IPR009301 Protein of unknown function DUF957 LFZ55_RS02930 70cf0d7085b9c00e885c1ca0624b4260 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 243 5.3E-61 T 06-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LFZ55_RS02930 70cf0d7085b9c00e885c1ca0624b4260 256 Gene3D G3DSA:3.20.20.60 6 255 5.2E-79 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS02930 70cf0d7085b9c00e885c1ca0624b4260 256 SUPERFAMILY SSF51621 3 255 6.28E-83 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS02930 70cf0d7085b9c00e885c1ca0624b4260 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 2.2E-144 T 06-07-2017 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 LFZ55_RS02930 70cf0d7085b9c00e885c1ca0624b4260 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 68.218 T 06-07-2017 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 LFZ55_RS20115 21bf590bb112cac479eef5a27f781ef2 72 ProDom PD056390 YAAY CYTOPLASMIC STY0053 ECS0027 3 72 2.0E-29 T 06-07-2017 IPR020105 Uncharacterised protein family YaaY LFZ55_RS20115 21bf590bb112cac479eef5a27f781ef2 72 Pfam PF10837 Protein of unknown function (DUF2575) 3 72 8.8E-45 T 06-07-2017 IPR020105 Uncharacterised protein family YaaY LFZ55_RS14600 efd9c0c0ae97c546270ba9efc849bdcf 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 66.698 T 06-07-2017 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 LFZ55_RS14600 efd9c0c0ae97c546270ba9efc849bdcf 312 SUPERFAMILY SSF51735 98 278 9.87E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS14600 efd9c0c0ae97c546270ba9efc849bdcf 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 1.1E-42 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LFZ55_RS14600 efd9c0c0ae97c546270ba9efc849bdcf 312 Gene3D G3DSA:3.40.50.720 98 278 4.8E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 277.169 T 06-07-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 SUPERFAMILY SSF51658 4 418 7.46E-84 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 1.9E-244 T 06-07-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 06-07-2017 LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 Gene3D G3DSA:3.20.20.150 2 418 3.8E-227 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS23205 a56aed4fc1e8a2f335aa8fb7e6390a83 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 1.4E-234 T 06-07-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 LFZ55_RS01500 fb96aef4545a7659e9b9a0b14aeca5bc 323 Pfam PF04657 Putative inner membrane exporter, YdcZ 169 303 3.5E-16 T 06-07-2017 IPR006750 Putative inner membrane exporter, YdcZ LFZ55_RS01500 fb96aef4545a7659e9b9a0b14aeca5bc 323 Pfam PF04657 Putative inner membrane exporter, YdcZ 10 154 2.1E-30 T 06-07-2017 IPR006750 Putative inner membrane exporter, YdcZ LFZ55_RS06735 e7eed06c3b96c37ec0aca7a363327205 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.573 T 06-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LFZ55_RS06735 e7eed06c3b96c37ec0aca7a363327205 208 SUPERFAMILY SSF53271 4 206 4.59E-66 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS06735 e7eed06c3b96c37ec0aca7a363327205 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 6.8E-90 T 06-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LFZ55_RS06735 e7eed06c3b96c37ec0aca7a363327205 208 Gene3D G3DSA:3.40.50.2020 2 208 5.0E-75 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS06735 e7eed06c3b96c37ec0aca7a363327205 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.6E-65 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 SUPERFAMILY SSF52540 1 206 2.13E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 Gene3D G3DSA:1.10.8.10 168 207 1.9E-24 T 06-07-2017 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 3.5E-35 T 06-07-2017 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 Pfam PF13177 DNA polymerase III, delta subunit 10 166 1.2E-41 T 06-07-2017 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 Gene3D G3DSA:1.20.272.10 208 326 1.7E-45 T 06-07-2017 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 SUPERFAMILY SSF48019 208 327 1.87E-36 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 6.4E-61 T 06-07-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LFZ55_RS14260 f9300cacf40bec6f96c1861cefcc1b4e 334 Gene3D G3DSA:3.40.50.300 4 166 8.7E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00880 4f3660c5688bfa27a6d2ebaf4da8c561 416 Gene3D G3DSA:3.40.640.10 61 266 6.3E-40 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS00880 4f3660c5688bfa27a6d2ebaf4da8c561 416 Gene3D G3DSA:3.90.1150.10 267 410 6.8E-14 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LFZ55_RS00880 4f3660c5688bfa27a6d2ebaf4da8c561 416 SUPERFAMILY SSF53383 16 412 1.65E-57 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS00880 4f3660c5688bfa27a6d2ebaf4da8c561 416 Pfam PF00155 Aminotransferase class I and II 167 373 3.0E-20 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS13245 11595e3730121d38ebc3445fb07a165f 83 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 3.0E-24 T 06-07-2017 IPR012671 Type III secretion system, secretion protein E GO:0009405 LFZ55_RS13245 11595e3730121d38ebc3445fb07a165f 83 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 4.0E-23 T 06-07-2017 IPR012671 Type III secretion system, secretion protein E GO:0009405 LFZ55_RS21145 4762486edae0176531c5ec11b8886681 357 SUPERFAMILY SSF53850 31 328 7.41E-42 T 06-07-2017 LFZ55_RS21145 4762486edae0176531c5ec11b8886681 357 Gene3D G3DSA:3.40.190.10 1 133 5.5E-24 T 06-07-2017 LFZ55_RS21145 4762486edae0176531c5ec11b8886681 357 Gene3D G3DSA:3.40.190.10 295 329 5.5E-24 T 06-07-2017 LFZ55_RS21145 4762486edae0176531c5ec11b8886681 357 Gene3D G3DSA:3.40.190.10 138 294 5.1E-19 T 06-07-2017 LFZ55_RS21145 4762486edae0176531c5ec11b8886681 357 Pfam PF13416 Bacterial extracellular solute-binding protein 51 329 6.8E-30 T 06-07-2017 LFZ55_RS10465 2274dd0c1c0d94129ef3a45b9795e4f2 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.8E-28 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ55_RS10465 2274dd0c1c0d94129ef3a45b9795e4f2 270 Gene3D G3DSA:3.40.50.300 1 248 1.1E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10465 2274dd0c1c0d94129ef3a45b9795e4f2 270 SUPERFAMILY SSF52540 1 268 8.15E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS10465 2274dd0c1c0d94129ef3a45b9795e4f2 270 PIRSF PIRSF003092 1 270 5.2E-99 T 06-07-2017 IPR025501 ATP binding protein MinD LFZ55_RS10465 2274dd0c1c0d94129ef3a45b9795e4f2 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 5.4E-110 T 06-07-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 LFZ55_RS17150 8becd9ae6eedade1f1448a1cbe1d5c20 379 SUPERFAMILY SSF54862 21 104 1.2E-6 T 06-07-2017 LFZ55_RS17150 8becd9ae6eedade1f1448a1cbe1d5c20 379 Gene3D G3DSA:3.30.70.20 22 74 3.2E-5 T 06-07-2017 LFZ55_RS17150 8becd9ae6eedade1f1448a1cbe1d5c20 379 SUPERFAMILY SSF103501 157 371 8.63E-35 T 06-07-2017 IPR023234 NarG-like domain LFZ55_RS17150 8becd9ae6eedade1f1448a1cbe1d5c20 379 TIGRFAM TIGR02484 CitB: CitB domain protein 15 374 2.4E-120 T 06-07-2017 IPR012830 Citrate utilization protein B LFZ55_RS19185 37eb884de16567ea15599befa3d8a801 233 Pfam PF17185 NlpE C-terminal OB domain 143 231 4.0E-34 T 06-07-2017 IPR033450 NlpE, C-terminal OB domain LFZ55_RS19185 37eb884de16567ea15599befa3d8a801 233 Pfam PF04170 NlpE N-terminal domain 45 129 2.6E-25 T 06-07-2017 IPR007298 Copper resistance lipoprotein NlpE LFZ55_RS01915 8c5dd5f404885dce2cb484be0463df6b 206 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 6 200 1.3E-53 T 06-07-2017 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 LFZ55_RS01915 8c5dd5f404885dce2cb484be0463df6b 206 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 6 199 3.0E-46 T 06-07-2017 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 LFZ55_RS17295 212ac0ce4f4bbff581c9d8e4f254dc3c 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 1.9E-27 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17295 212ac0ce4f4bbff581c9d8e4f254dc3c 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 2.8E-15 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS17295 212ac0ce4f4bbff581c9d8e4f254dc3c 246 SUPERFAMILY SSF161098 24 223 8.5E-38 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17295 212ac0ce4f4bbff581c9d8e4f254dc3c 246 Gene3D G3DSA:1.10.3720.10 23 238 7.2E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 3.4E-148 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 Pfam PF01018 GTP1/OBG 3 157 1.6E-60 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 Gene3D G3DSA:3.40.50.300 160 348 9.7E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 06-07-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 PIRSF PIRSF002401 1 375 1.4E-139 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 SUPERFAMILY SSF82051 2 157 2.09E-56 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.2 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 SUPERFAMILY SSF52540 151 337 3.8E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 Gene3D G3DSA:2.70.210.12 2 156 2.7E-60 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 LFZ55_RS02715 c3ca6298384c10fe5ee797a72263a013 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 3.3E-23 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 LFZ55_RS14475 63fbd6653faba82decc8afc5d15bfd55 37 ProDom PD049682 YCEO INNER MEMBRANE STY1197 1 37 8.0E-13 T 06-07-2017 IPR024494 Protein of unknown function DUF2770 LFZ55_RS14475 63fbd6653faba82decc8afc5d15bfd55 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 3.5E-21 T 06-07-2017 IPR024494 Protein of unknown function DUF2770 LFZ55_RS24180 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor LFZ55_RS24180 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor LFZ55_RS24180 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor LFZ55_RS24180 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor LFZ55_RS24180 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor LFZ55_RS08095 a4a24ee82b6dbec2a9f0f77bc5982f18 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 46.889 T 06-07-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LFZ55_RS08095 a4a24ee82b6dbec2a9f0f77bc5982f18 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.8E-97 T 06-07-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 PIRSF PIRSF000179 1 119 8.2E-51 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 SUPERFAMILY SSF81343 1 119 2.11E-51 T 06-07-2017 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 26.848 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 119 3.0E-62 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 Pfam PF02313 Fumarate reductase subunit D 6 117 7.9E-50 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 LFZ55_RS21825 b9622b42c26722af3ca31aebcc698b7d 119 Gene3D G3DSA:1.20.1300.10 1 119 7.4E-54 T 06-07-2017 LFZ55_RS24960 771921682aa2995e970417899280c0dc 131 Pfam PF05509 TraY domain 70 117 2.5E-20 T 06-07-2017 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 LFZ55_RS24960 771921682aa2995e970417899280c0dc 131 Pfam PF05509 TraY domain 15 58 3.7E-14 T 06-07-2017 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 Pfam PF01311 Bacterial export proteins, family 1 3 232 1.3E-50 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 2 228 5.7E-68 T 06-07-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 68 87 3.1E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 191 210 3.1E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 169 191 3.1E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS18835 1214dfa18464a28b9e87e28d698f6fbf 248 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 5 26 3.1E-26 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 Gene3D G3DSA:2.40.170.20 150 733 9.5E-74 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 Gene3D G3DSA:2.170.130.10 22 149 7.7E-27 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 Pfam PF00593 TonB dependent receptor 486 729 1.1E-19 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 46 733 3.3E-183 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 SUPERFAMILY SSF56935 31 437 1.68E-92 T 06-07-2017 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 SUPERFAMILY SSF56935 468 731 1.68E-92 T 06-07-2017 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 146 1.3E-17 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 06-07-2017 IPR010916 TonB box, conserved site LFZ55_RS15160 8747c286a69f4010cad6fd18a2cd3833 733 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 716 733 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site LFZ55_RS01975 dac1d52d71de7545ed6525f52585842e 118 Hamap MF_00389 Protein TusC [tusC]. 1 118 33.318 T 06-07-2017 IPR017462 Sulphur relay, TusC/DsrF LFZ55_RS01975 dac1d52d71de7545ed6525f52585842e 118 Pfam PF02635 DsrE/DsrF-like family 2 118 4.3E-20 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein LFZ55_RS01975 dac1d52d71de7545ed6525f52585842e 118 SUPERFAMILY SSF75169 1 118 4.42E-35 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS01975 dac1d52d71de7545ed6525f52585842e 118 Gene3D G3DSA:3.40.1260.10 1 118 8.2E-47 T 06-07-2017 IPR027396 DsrEFH-like LFZ55_RS01975 dac1d52d71de7545ed6525f52585842e 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 7.9E-46 T 06-07-2017 IPR017462 Sulphur relay, TusC/DsrF LFZ55_RS08290 868b9810663c70dede05af0d28be1d13 285 SUPERFAMILY SSF53474 1 277 5.72E-89 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS08290 868b9810663c70dede05af0d28be1d13 285 Pfam PF00756 Putative esterase 22 271 1.2E-71 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 LFZ55_RS08290 868b9810663c70dede05af0d28be1d13 285 Gene3D G3DSA:3.40.50.1820 1 277 2.8E-78 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS08290 868b9810663c70dede05af0d28be1d13 285 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 2.7E-118 T 06-07-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 LFZ55_RS03210 9d9f1399a1aca71b7b6d821a7ce0b9f0 201 SUPERFAMILY SSF117457 3 174 8.89E-57 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS03210 9d9f1399a1aca71b7b6d821a7ce0b9f0 201 Pfam PF05683 Fumarase C-terminus 9 175 1.9E-39 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS03210 9d9f1399a1aca71b7b6d821a7ce0b9f0 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 5.8E-76 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS03210 9d9f1399a1aca71b7b6d821a7ce0b9f0 201 Gene3D G3DSA:3.20.130.10 1 174 2.7E-67 T 06-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 06-07-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03185 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS15040 47b659df89ec41b26f6fed562665f503 489 Pfam PF03577 Peptidase family C69 19 416 2.8E-153 T 06-07-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 LFZ55_RS03075 64236c40e290c766de4628eddbc83f31 122 Pfam PF06476 Protein of unknown function (DUF1090) 10 116 1.9E-37 T 06-07-2017 IPR009468 Protein of unknown function DUF1090 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 SMART SM00155 386 413 1.5E-4 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 SMART SM00155 147 174 0.19 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 Gene3D G3DSA:3.30.870.10 28 216 2.2E-41 T 06-07-2017 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 Gene3D G3DSA:3.30.870.10 239 459 2.6E-53 T 06-07-2017 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 SUPERFAMILY SSF56024 261 459 1.03E-34 T 06-07-2017 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 Hamap MF_01918 Cardiolipin synthase C [clsC]. 62 495 80.544 T 06-07-2017 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 SUPERFAMILY SSF56024 31 210 6.5E-37 T 06-07-2017 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 Pfam PF13091 PLD-like domain 296 439 1.4E-25 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS14535 3722e326336170e395f7699a74981b9f 495 Pfam PF13091 PLD-like domain 62 206 5.3E-14 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS17590 7e84961835faa2e95d8095fcf88c57ad 391 Gene3D G3DSA:3.60.120.10 99 389 3.6E-80 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS17590 7e84961835faa2e95d8095fcf88c57ad 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 111 387 5.4E-82 T 06-07-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 LFZ55_RS17590 7e84961835faa2e95d8095fcf88c57ad 391 Pfam PF00425 chorismate binding enzyme 126 380 3.0E-65 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal LFZ55_RS17590 7e84961835faa2e95d8095fcf88c57ad 391 SUPERFAMILY SSF56322 16 389 1.44E-85 T 06-07-2017 IPR005801 ADC synthase GO:0009058 LFZ55_RS06695 51044b1c9410dc8dbad0b2825b86a31d 61 Gene3D G3DSA:1.25.40.10 5 33 3.6E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS23005 e2736e9d91534196d6339ca7f1a461ef 296 Gene3D G3DSA:3.20.20.220 11 293 2.2E-108 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like LFZ55_RS23005 e2736e9d91534196d6339ca7f1a461ef 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 4.0E-106 T 06-07-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 LFZ55_RS23005 e2736e9d91534196d6339ca7f1a461ef 296 SUPERFAMILY SSF51730 22 294 6.87E-97 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like LFZ55_RS23005 e2736e9d91534196d6339ca7f1a461ef 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 3.1E-107 T 06-07-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 LFZ55_RS19695 a2e731e005cc501cfb807c798fa87807 165 PIRSF PIRSF004572 1 165 6.3E-81 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 LFZ55_RS19695 a2e731e005cc501cfb807c798fa87807 165 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 165 6.0E-87 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 LFZ55_RS19695 a2e731e005cc501cfb807c798fa87807 165 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 162 1.1E-51 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 LFZ55_RS19695 a2e731e005cc501cfb807c798fa87807 165 Hamap MF_01332 Secretion monitor [secM]. 1 165 38.683 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 LFZ55_RS19070 6447eed598d56e332b654e69706c3748 239 Pfam PF13505 Outer membrane protein beta-barrel domain 6 239 5.8E-22 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel LFZ55_RS19070 6447eed598d56e332b654e69706c3748 239 SUPERFAMILY SSF56925 23 239 6.54E-29 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS19070 6447eed598d56e332b654e69706c3748 239 Gene3D G3DSA:2.40.160.20 23 239 6.1E-36 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 7.0E-34 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 Pfam PF00813 FliP family 48 239 2.7E-79 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 1.8E-68 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LFZ55_RS09530 c7c72a7b97229cfdb18c0269461db729 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 8.5E-95 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LFZ55_RS24715 e6c9ec3e755205d1c31d99ae69ee8aee 147 Pfam PF08388 Group II intron, maturase-specific domain 86 137 9.4E-12 T 06-07-2017 IPR013597 Group II intron, maturase-specific LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 TIGRFAM TIGR04007 wcaI: colanic acid biosynthesis glycosyltransferase WcaI 1 407 6.3E-269 T 06-07-2017 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 Pfam PF00534 Glycosyl transferases group 1 220 389 2.1E-19 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 Gene3D G3DSA:3.40.50.2000 214 309 6.6E-7 T 06-07-2017 LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 SUPERFAMILY SSF53756 2 322 3.98E-39 T 06-07-2017 LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 SUPERFAMILY SSF53756 354 403 3.98E-39 T 06-07-2017 LFZ55_RS08735 2e1baa9ad60329bc5c99987b0d2a3b4d 407 Pfam PF13579 Glycosyl transferase 4-like domain 15 204 2.5E-28 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS15475 148ba08d2085ca7e2805b80ed89f06f0 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 5.7E-43 T 06-07-2017 LFZ55_RS15475 148ba08d2085ca7e2805b80ed89f06f0 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 06-07-2017 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 LFZ55_RS21000 5513c00e6187cb66f4e3ea251fc7c310 262 Pfam PF11920 Protein of unknown function (DUF3438) 7 261 5.7E-98 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 LFZ55_RS21000 5513c00e6187cb66f4e3ea251fc7c310 262 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 8 251 1.1E-94 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 LFZ55_RS16130 91364c64e5a6f454e412d8ca7bfc11a2 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 58 172 3.0E-23 T 06-07-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 SUPERFAMILY SSF51182 27 161 1.78E-15 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 Pfam PF07883 Cupin domain 29 81 2.0E-8 T 06-07-2017 IPR013096 Cupin 2, conserved barrel LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 Gene3D G3DSA:1.10.10.60 224 274 9.1E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 2.7E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 2.7E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 SMART SM00342 189 272 1.0E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 SUPERFAMILY SSF46689 225 275 7.62E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 Pfam PF12833 Helix-turn-helix domain 200 274 8.3E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 Gene3D G3DSA:2.60.120.10 28 100 9.0E-14 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS13600 5a33aad8d685eaee3ea4463dba87e3bc 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS05735 3452179cad1d3ce13c46d4e0fc789c4e 96 Pfam PF03658 RnfH family Ubiquitin 7 87 6.9E-34 T 06-07-2017 IPR005346 RnfH protein LFZ55_RS05735 3452179cad1d3ce13c46d4e0fc789c4e 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.314 T 06-07-2017 IPR005346 RnfH protein LFZ55_RS05735 3452179cad1d3ce13c46d4e0fc789c4e 96 Gene3D G3DSA:3.10.20.280 3 89 7.8E-37 T 06-07-2017 IPR005346 RnfH protein LFZ55_RS05735 3452179cad1d3ce13c46d4e0fc789c4e 96 SUPERFAMILY SSF54285 4 79 2.05E-26 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 Gene3D G3DSA:4.10.520.10 1 91 2.5E-34 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.1E-30 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 SUPERFAMILY SSF47729 1 91 8.54E-30 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.389 T 06-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.5E-53 T 06-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LFZ55_RS15725 b144edbbf2f63ebfa6bd8b3d4a9eef22 94 SMART SM00411 1 91 1.9E-43 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 Gene3D G3DSA:3.30.565.10 371 496 3.7E-9 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 497 4.1E-7 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 SMART SM00387 409 499 2.1E-10 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 SUPERFAMILY SSF55874 377 496 9.56E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 Pfam PF07730 Histidine kinase 305 370 9.6E-15 T 06-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LFZ55_RS00290 52652079596223c08ed7b539e3ff11a3 500 Pfam PF05231 MASE1 11 275 9.7E-13 T 06-07-2017 IPR007895 MASE1 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 SUPERFAMILY SSF160544 239 342 5.23E-25 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 217 234 8.0E-33 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 291 312 8.0E-33 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 197 215 8.0E-33 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 261 276 8.0E-33 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 8.0E-33 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 Gene3D G3DSA:3.40.1690.10 206 344 3.1E-42 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 335 2.6E-86 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS04975 d3d9d2d19070ca5deb52b34ada0c0863 356 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 339 9.2E-132 T 06-07-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 SUPERFAMILY SSF47413 6 59 5.63E-9 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 SUPERFAMILY SSF52374 66 229 1.82E-18 T 06-07-2017 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 Gene3D G3DSA:3.40.50.300 231 400 3.8E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 Pfam PF13521 AAA domain 234 394 2.8E-31 T 06-07-2017 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 Gene3D G3DSA:1.10.260.40 6 58 3.1E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 Pfam PF01381 Helix-turn-helix 7 59 5.2E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 SUPERFAMILY SSF52540 232 386 1.23E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.4E-161 T 06-07-2017 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 PIRSF PIRSF004776 2 410 3.6E-218 T 06-07-2017 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 Gene3D G3DSA:3.40.50.620 64 230 1.1E-51 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 4.3E-19 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LFZ55_RS20405 ac6f3d589eb0368861d071dfa3345162 410 SMART SM00530 6 62 7.0E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.863 T 06-07-2017 IPR017687 Outer membrane protein assembly factor BamB LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SUPERFAMILY SSF50998 32 384 1.73E-78 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 Gene3D G3DSA:2.140.10.10 2 391 2.2E-76 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 4.9E-133 T 06-07-2017 IPR017687 Outer membrane protein assembly factor BamB LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 Pfam PF13360 PQQ-like domain 78 319 4.6E-51 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 289 320 230.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 155 186 6.7E-5 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 329 361 0.019 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 114 146 0.0038 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 200 231 110.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 251 282 2.8E-5 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS06285 2181a9e96400d23a9a5fa20a5da566c8 392 SMART SM00564 65 96 1.1E-4 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LFZ55_RS24725 641e95897072d0987ca6721d3aca392b 145 Gene3D G3DSA:3.30.70.1290 2 133 6.8E-43 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS24725 641e95897072d0987ca6721d3aca392b 145 SUPERFAMILY SSF143422 1 131 6.54E-41 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS24725 641e95897072d0987ca6721d3aca392b 145 SMART SM01321 11 130 1.4E-38 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS24725 641e95897072d0987ca6721d3aca392b 145 Pfam PF01797 Transposase IS200 like 12 130 6.1E-36 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS14270 9c74fc67208e4aa5979c97ba2fd3a232 340 Gene3D G3DSA:3.30.160.60 71 109 3.0E-24 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 LFZ55_RS14270 9c74fc67208e4aa5979c97ba2fd3a232 340 Gene3D G3DSA:3.30.160.60 303 338 3.0E-18 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 LFZ55_RS14270 9c74fc67208e4aa5979c97ba2fd3a232 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 337 7.5E-142 T 06-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like LFZ55_RS14270 9c74fc67208e4aa5979c97ba2fd3a232 340 Pfam PF02618 YceG-like family 43 328 1.4E-78 T 06-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like LFZ55_RS18785 8afbcb43b98ee25dd81476112b9ec57a 196 Gene3D G3DSA:2.60.40.1090 35 196 7.4E-15 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18785 8afbcb43b98ee25dd81476112b9ec57a 196 SUPERFAMILY SSF49401 35 196 1.89E-16 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS18785 8afbcb43b98ee25dd81476112b9ec57a 196 Pfam PF00419 Fimbrial protein 37 195 2.2E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS09790 3403feadc7931be82ce49dd39ba42532 473 SUPERFAMILY SSF53756 2 453 6.28E-145 T 06-07-2017 LFZ55_RS09790 3403feadc7931be82ce49dd39ba42532 473 Gene3D G3DSA:3.40.50.2000 1 237 3.0E-71 T 06-07-2017 LFZ55_RS09790 3403feadc7931be82ce49dd39ba42532 473 Gene3D G3DSA:3.40.50.2000 243 434 3.8E-75 T 06-07-2017 LFZ55_RS09790 3403feadc7931be82ce49dd39ba42532 473 Pfam PF00982 Glycosyltransferase family 20 17 451 6.8E-146 T 06-07-2017 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 LFZ55_RS09790 3403feadc7931be82ce49dd39ba42532 473 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 451 2.0E-180 T 06-07-2017 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 178 1.1E-38 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 SUPERFAMILY SSF56762 225 600 4.97E-119 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 600 41.937 T 06-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 176 3.0E-43 T 06-07-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 06-07-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 72.429 T 06-07-2017 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 2.0E-26 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 7.6E-177 T 06-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 SUPERFAMILY SSF143243 25 229 1.96E-57 T 06-07-2017 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 Gene3D G3DSA:1.10.645.10 217 584 1.1E-45 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS07640 59fcda3e97b5869da92f0bdc8cfd2848 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 3.7E-102 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 4.7E-108 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 06-07-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 51.698 T 06-07-2017 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 Gene3D G3DSA:3.20.20.70 5 292 1.2E-86 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 06-07-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 3.9E-21 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 3.9E-21 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 3.9E-21 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 3.9E-21 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 SMART SM01130 4 293 1.2E-87 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 PIRSF PIRSF001365 1 297 6.7E-83 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 SUPERFAMILY SSF51569 5 291 1.26E-82 T 06-07-2017 LFZ55_RS02515 1aaefcc037977ce0a45cda9d61a29004 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 295 4.3E-162 T 06-07-2017 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581 LFZ55_RS03955 09cefbd0d5f8cba41d582fbf1910a43c 235 Pfam PF02361 Cobalt transport protein 10 201 2.4E-7 T 06-07-2017 IPR003339 ABC/ECF transporter, transmembrane component LFZ55_RS07750 a1eff047149502e1212b0d1081b9ab2f 125 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.531 T 06-07-2017 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 SUPERFAMILY SSF46785 26 107 1.5E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 1.5E-14 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 Pfam PF03466 LysR substrate binding domain 116 316 1.2E-18 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 SUPERFAMILY SSF53850 116 316 1.03E-22 T 06-07-2017 LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 Gene3D G3DSA:1.10.10.10 25 106 3.6E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 Gene3D G3DSA:3.40.190.10 201 280 5.8E-11 T 06-07-2017 LFZ55_RS17395 4ac39edc6fa2c81437b09361dbdd42fa 317 Gene3D G3DSA:3.40.190.10 116 200 3.0E-10 T 06-07-2017 LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 Pfam PF14497 Glutathione S-transferase, C-terminal domain 115 199 3.0E-5 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 Gene3D G3DSA:3.40.30.10 1 89 7.8E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 SUPERFAMILY SSF47616 81 203 1.56E-27 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 SUPERFAMILY SSF52833 1 89 6.9E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 2.9E-16 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 203 6.1E-83 T 06-07-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 LFZ55_RS08385 1eb6c8f56b31ccff51fa1e61cb1acb39 203 Gene3D G3DSA:1.20.1050.10 90 203 1.1E-43 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like LFZ55_RS05040 104a69b22fe429f077c2894ba9d12adf 392 TIGRFAM TIGR02554 PrgH: type III secretion apparatus protein PrgH/EprH 10 392 1.3E-194 T 06-07-2017 IPR013387 Type III secretion system, PrgH/EprH LFZ55_RS05040 104a69b22fe429f077c2894ba9d12adf 392 Pfam PF09480 Type III secretion system protein PrgH-EprH (PrgH) 16 388 2.3E-131 T 06-07-2017 IPR019029 Type III secretion system, PrgH/EprH-like GO:0016021 LFZ55_RS04310 e9b849400c307f90ba3387c3cde485f1 160 Pfam PF05232 Chlorhexidine efflux transporter 86 149 6.2E-22 T 06-07-2017 IPR007896 Chlorhexidine efflux transporter LFZ55_RS04310 e9b849400c307f90ba3387c3cde485f1 160 Pfam PF05232 Chlorhexidine efflux transporter 18 80 3.0E-24 T 06-07-2017 IPR007896 Chlorhexidine efflux transporter LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 Gene3D G3DSA:1.10.10.10 11 64 3.4E-10 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 Gene3D G3DSA:3.40.50.1360 90 231 7.0E-17 T 06-07-2017 LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 SMART SM00420 18 70 3.8E-20 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 7.6E-56 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 SUPERFAMILY SSF100950 88 248 9.21E-33 T 06-07-2017 LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 73 8.7E-19 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 SUPERFAMILY SSF46785 16 71 2.12E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS02920 10b3d4fec781d0c88ba6c732995e685a 269 SMART SM01134 87 248 9.6E-72 T 06-07-2017 LFZ55_RS11895 799ca3880923a00636442f1cb952ca76 268 Pfam PF03437 BtpA family 10 265 6.2E-105 T 06-07-2017 IPR005137 Photosystem I BtpA, assembly LFZ55_RS11895 799ca3880923a00636442f1cb952ca76 268 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 35 207 2.0E-98 T 06-07-2017 IPR005137 Photosystem I BtpA, assembly LFZ55_RS11895 799ca3880923a00636442f1cb952ca76 268 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 11 267 7.2E-118 T 06-07-2017 IPR005137 Photosystem I BtpA, assembly LFZ55_RS11895 799ca3880923a00636442f1cb952ca76 268 PIRSF PIRSF005956 2 268 8.4E-81 T 06-07-2017 IPR005137 Photosystem I BtpA, assembly LFZ55_RS11895 799ca3880923a00636442f1cb952ca76 268 SUPERFAMILY SSF51366 3 264 2.19E-22 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS04910 c807a7a6939a9ac4377b4bcdd1eba1a9 147 Pfam PF04741 InvH outer membrane lipoprotein 1 147 5.6E-91 T 06-07-2017 IPR006830 InvH outer membrane lipoprotein GO:0009405 LFZ55_RS04910 c807a7a6939a9ac4377b4bcdd1eba1a9 147 ProDom PD004896 INVH LIPOPROTEIN MEMBRANE PALMITATE ADHERANCE/INVASION OUTER PRECURSOR INVASION VIRULENCE SIGNAL 1 147 3.0E-82 T 06-07-2017 IPR006830 InvH outer membrane lipoprotein GO:0009405 LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 115 123 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 11 23 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 94 105 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 136 145 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 54 67 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 107 113 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 PRINTS PR01227 Salmonella surface presentation of antigen gene type M signature 27 39 9.7E-36 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS04945 3963d8a3eb9c9b128e584ff307707c0a 147 Pfam PF02090 Salmonella surface presentation of antigen gene type M protein 6 145 1.7E-60 T 06-07-2017 IPR002954 Salmonella surface presentation of antigen M protein LFZ55_RS20565 37fd336e1f6cd48f0e0f6af2e5e1c710 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 42.891 T 06-07-2017 IPR020914 Uncharacterised protein family UPF0442 LFZ55_RS20565 37fd336e1f6cd48f0e0f6af2e5e1c710 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 2.1E-33 T 06-07-2017 IPR024528 Threonine/Serine exporter, ThrE LFZ55_RS09620 7b3ff2d5ef1c9debc1d33b4549833826 135 Pfam PF02561 Flagellar protein FliS 8 125 8.7E-41 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 LFZ55_RS09620 7b3ff2d5ef1c9debc1d33b4549833826 135 SUPERFAMILY SSF101116 9 128 6.15E-41 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 LFZ55_RS09620 7b3ff2d5ef1c9debc1d33b4549833826 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 5.1E-44 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 LFZ55_RS09620 7b3ff2d5ef1c9debc1d33b4549833826 135 Gene3D G3DSA:1.20.120.340 8 129 3.0E-46 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 LFZ55_RS09620 7b3ff2d5ef1c9debc1d33b4549833826 135 PIRSF PIRSF039090 1 135 2.2E-46 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 LFZ55_RS19520 8a99de5ed85f98b78e4f1080034063c7 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 1.0E-8 T 06-07-2017 IPR019114 Chaperone lipoprotein, PulS/OutS-like LFZ55_RS19520 8a99de5ed85f98b78e4f1080034063c7 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 4.0E-63 T 06-07-2017 LFZ55_RS09160 0d163582e63afec8ad84fb5142b1ff6e 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 4.0E-53 T 06-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09160 0d163582e63afec8ad84fb5142b1ff6e 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.837 T 06-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS09160 0d163582e63afec8ad84fb5142b1ff6e 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 6.1E-79 T 06-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 LFZ55_RS21395 4fb03a33265ebbd2e7628bffb8e546ba 112 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 6 111 1.3E-46 T 06-07-2017 IPR020044 PRD domain protein, EF0829/AHA3910 LFZ55_RS21395 4fb03a33265ebbd2e7628bffb8e546ba 112 SUPERFAMILY SSF63520 12 109 2.75E-9 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS21395 4fb03a33265ebbd2e7628bffb8e546ba 112 Gene3D G3DSA:1.10.1790.10 14 109 7.7E-5 T 06-07-2017 IPR011608 PRD domain GO:0006355 LFZ55_RS08350 0daf17bf9bbae5097999893bd98d5932 239 PIRSF PIRSF005011 1 239 3.5E-154 T 06-07-2017 IPR023604 Uncharacterised protein family SanA LFZ55_RS08350 0daf17bf9bbae5097999893bd98d5932 239 Pfam PF02698 DUF218 domain 48 171 2.2E-17 T 06-07-2017 IPR003848 Domain of unknown function DUF218 LFZ55_RS08350 0daf17bf9bbae5097999893bd98d5932 239 Gene3D G3DSA:3.40.50.620 39 170 1.2E-7 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS22395 e268fd43c32087f61c3c6537d13c17f1 463 Pfam PF01618 MotA/TolQ/ExbB proton channel family 114 211 6.8E-5 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 295 373 3.0E-4 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 1568 1643 8.1E-6 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 2276 2349 1.5E-4 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 1257 1336 1.7E-8 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 948 1017 7.6E-4 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 2380 2451 3.5E-4 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.1560 2484 2563 1.6E-4 T 06-07-2017 LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3741 3821 8.6E-17 T 06-07-2017 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Gene3D G3DSA:2.60.40.10 1363 1424 5.5E-4 T 06-07-2017 IPR013783 Immunoglobulin-like fold LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3137 3162 0.0034 T 06-07-2017 IPR010221 VCBS repeat LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3642 3691 0.0012 T 06-07-2017 IPR010221 VCBS repeat LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3385 3424 0.0014 T 06-07-2017 IPR010221 VCBS repeat LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 2007 2036 0.73 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 444 476 0.15 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 2226 2253 0.7 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 1515 1539 0.067 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 2114 2146 0.42 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS05720 3c9e9c5c4dcc7e1e0c0fe126dafde70a 3824 Pfam PF12245 Bacterial Ig-like domain (group 3) 1624 1637 5.0 T 06-07-2017 IPR022038 Bacterial Ig-like domain LFZ55_RS15750 8deb66dfd5f751f79db4328916197f86 230 Gene3D G3DSA:3.30.240.20 95 167 2.7E-23 T 06-07-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain LFZ55_RS15750 8deb66dfd5f751f79db4328916197f86 230 Pfam PF04239 Protein of unknown function (DUF421) 104 168 3.5E-15 T 06-07-2017 IPR007353 Protein of unknown function DUF421 LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 SUPERFAMILY SSF46785 12 77 3.97E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 SUPERFAMILY SSF53067 86 391 3.33E-46 T 06-07-2017 LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 Pfam PF00480 ROK family 87 389 1.6E-54 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 Gene3D G3DSA:3.30.420.40 224 375 2.6E-43 T 06-07-2017 LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 Gene3D G3DSA:3.30.420.40 83 223 7.8E-34 T 06-07-2017 LFZ55_RS12755 5e39989a2e65f715a888136f3b4c1e56 406 Gene3D G3DSA:1.10.10.10 12 80 1.1E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08175 71b7b8b934e87d4a5bbc61534c4c3e34 328 Gene3D G3DSA:3.40.50.300 3 190 6.5E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08175 71b7b8b934e87d4a5bbc61534c4c3e34 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 3.3E-5 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LFZ55_RS08175 71b7b8b934e87d4a5bbc61534c4c3e34 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 176 1.5E-39 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS08175 71b7b8b934e87d4a5bbc61534c4c3e34 328 SUPERFAMILY SSF52540 6 188 2.71E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS01630 e6fe7d4adea858335c2a457e4e987f9a 227 Gene3D G3DSA:3.40.50.2020 51 226 2.8E-25 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS01630 e6fe7d4adea858335c2a457e4e987f9a 227 SUPERFAMILY SSF53271 47 225 3.41E-35 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like LFZ55_RS01630 e6fe7d4adea858335c2a457e4e987f9a 227 Pfam PF00156 Phosphoribosyl transferase domain 173 224 2.3E-7 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LFZ55_RS03275 367b0b9ce56a7af1ff225ddf4fa5b57d 217 Gene3D G3DSA:3.90.870.10 9 216 9.5E-95 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS03275 367b0b9ce56a7af1ff225ddf4fa5b57d 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.924 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS03275 367b0b9ce56a7af1ff225ddf4fa5b57d 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.9E-84 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS03275 367b0b9ce56a7af1ff225ddf4fa5b57d 217 SUPERFAMILY SSF55821 7 213 1.28E-85 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LFZ55_RS03275 367b0b9ce56a7af1ff225ddf4fa5b57d 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 208 1.9E-82 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LFZ55_RS08950 fa2d1bb39fa9cf1252b56a193d687217 111 PIRSF PIRSF028773 1 111 1.2E-54 T 06-07-2017 IPR007458 Protein of unknown function DUF496 LFZ55_RS08950 fa2d1bb39fa9cf1252b56a193d687217 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 3.0E-43 T 06-07-2017 IPR007458 Protein of unknown function DUF496 LFZ55_RS08950 fa2d1bb39fa9cf1252b56a193d687217 111 Pfam PF04363 Protein of unknown function (DUF496) 8 99 6.1E-46 T 06-07-2017 IPR007458 Protein of unknown function DUF496 LFZ55_RS08950 fa2d1bb39fa9cf1252b56a193d687217 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.719 T 06-07-2017 IPR007458 Protein of unknown function DUF496 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 SUPERFAMILY SSF143975 1 418 4.71E-145 T 06-07-2017 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 602 0.0 T 06-07-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 Pfam PF00920 Dehydratase family 66 598 4.3E-156 T 06-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 LFZ55_RS10015 d5af0d3ddc76035f82e20a793a33d1ed 603 SUPERFAMILY SSF52016 419 600 4.47E-57 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LFZ55_RS22585 8340aeac746524a02ad9ef71cfdfc36c 80 ProDom PD865006 YJBE PRECURSOR SIGNAL MEMBRANE OUTER EXPORTED 1 28 7.0E-8 T 06-07-2017 LFZ55_RS22585 8340aeac746524a02ad9ef71cfdfc36c 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 6.6E-29 T 06-07-2017 IPR025858 Exopolysaccharide production protein YjbE LFZ55_RS19010 68e0e0f96a4401d0fcd2a317894fe5c6 414 SUPERFAMILY SSF53474 46 413 1.22E-53 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS19010 68e0e0f96a4401d0fcd2a317894fe5c6 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 63.611 T 06-07-2017 IPR010520 UPF0255 family LFZ55_RS19010 68e0e0f96a4401d0fcd2a317894fe5c6 414 Gene3D G3DSA:3.40.50.1820 346 411 3.4E-25 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS19010 68e0e0f96a4401d0fcd2a317894fe5c6 414 Gene3D G3DSA:3.40.50.1820 163 301 3.4E-25 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS19010 68e0e0f96a4401d0fcd2a317894fe5c6 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 7.4E-213 T 06-07-2017 IPR010520 UPF0255 family LFZ55_RS04135 b8f195ff517cf274aef89b46fa00fa91 137 PIRSF PIRSF020653 1 137 6.7E-77 T 06-07-2017 IPR009883 Toxin CptA LFZ55_RS04135 b8f195ff517cf274aef89b46fa00fa91 137 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 133 1.0E-57 T 06-07-2017 IPR009883 Toxin CptA LFZ55_RS04135 b8f195ff517cf274aef89b46fa00fa91 137 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 128 1.9E-52 T 06-07-2017 IPR009883 Toxin CptA LFZ55_RS23230 58cb58469a822e7097388f772f45bc74 219 Pfam PF03591 AzlC protein 19 154 7.6E-30 T 06-07-2017 IPR011606 Branched-chain amino acid transport, permease LFZ55_RS20630 0dfc8bbe162c7a1eb9bf021ace3b2040 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 54 2.2E-12 T 06-07-2017 IPR009506 Protein of unknown function DUF1127 LFZ55_RS20365 ef68a648eae766d7b04cb50b9ae8a7d5 156 Pfam PF05981 CreA protein 24 155 6.8E-59 T 06-07-2017 IPR010292 Uncharacterised protein family CreA LFZ55_RS20365 ef68a648eae766d7b04cb50b9ae8a7d5 156 PIRSF PIRSF003174 1 156 5.4E-69 T 06-07-2017 IPR010292 Uncharacterised protein family CreA LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 ProSitePatterns PS00221 MIP family signature. 64 72 - T 06-07-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 Pfam PF00230 Major intrinsic protein 6 249 1.2E-63 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 Gene3D G3DSA:1.20.1080.10 3 255 1.7E-81 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 SUPERFAMILY SSF81338 6 255 5.36E-74 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 8.0E-66 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 232 252 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS09060 49c98e0843a5aac4512bf22dae406134 277 PRINTS PR00783 Major intrinsic protein family signature 182 204 1.7E-50 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LFZ55_RS18470 663b5d16dd580db2527069526fca5810 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS18470 663b5d16dd580db2527069526fca5810 302 Pfam PF00480 ROK family 3 299 4.3E-94 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LFZ55_RS18470 663b5d16dd580db2527069526fca5810 302 Gene3D G3DSA:3.30.420.40 2 131 5.7E-38 T 06-07-2017 LFZ55_RS18470 663b5d16dd580db2527069526fca5810 302 Gene3D G3DSA:3.30.420.40 132 280 3.2E-47 T 06-07-2017 LFZ55_RS18470 663b5d16dd580db2527069526fca5810 302 SUPERFAMILY SSF53067 3 299 1.07E-60 T 06-07-2017 LFZ55_RS02680 07fa44b7a4bfad291452c405a712a853 84 Gene3D G3DSA:3.30.300.90 1 80 2.4E-27 T 06-07-2017 IPR002634 BolA protein LFZ55_RS02680 07fa44b7a4bfad291452c405a712a853 84 SUPERFAMILY SSF82657 2 82 2.75E-28 T 06-07-2017 IPR002634 BolA protein LFZ55_RS02680 07fa44b7a4bfad291452c405a712a853 84 Pfam PF01722 BolA-like protein 17 74 5.9E-14 T 06-07-2017 IPR002634 BolA protein LFZ55_RS02680 07fa44b7a4bfad291452c405a712a853 84 PIRSF PIRSF003113 1 83 6.1E-21 T 06-07-2017 IPR002634 BolA protein LFZ55_RS13195 192bc4e39bdb74a1fe68a5c0f26c1742 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 1.5E-32 T 06-07-2017 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 LFZ55_RS13195 192bc4e39bdb74a1fe68a5c0f26c1742 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 2.0E-24 T 06-07-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 LFZ55_RS13195 192bc4e39bdb74a1fe68a5c0f26c1742 71 SUPERFAMILY SSF140129 1 67 1.31E-22 T 06-07-2017 LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 Pfam PF13238 AAA domain 5 136 1.5E-8 T 06-07-2017 LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 2 175 1.6E-67 T 06-07-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 SMART SM00072 1 178 1.8E-21 T 06-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 Gene3D G3DSA:3.40.50.300 2 24 9.2E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 Gene3D G3DSA:3.40.50.300 72 148 9.2E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 175 33.121 T 06-07-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 LFZ55_RS22215 319560441ad214721c77fb1ddd4b991b 184 SUPERFAMILY SSF52540 1 170 4.23E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18120 a8fed1344b765cf50e143429b4606de5 516 SUPERFAMILY SSF141868 273 514 1.7E-75 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18120 a8fed1344b765cf50e143429b4606de5 516 Pfam PF12792 CSS motif domain associated with EAL 38 242 5.5E-43 T 06-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LFZ55_RS18120 a8fed1344b765cf50e143429b4606de5 516 Gene3D G3DSA:3.20.20.450 273 514 1.0E-80 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18120 a8fed1344b765cf50e143429b4606de5 516 SMART SM00052 267 507 2.8E-108 T 06-07-2017 IPR001633 EAL domain LFZ55_RS18120 a8fed1344b765cf50e143429b4606de5 516 Pfam PF00563 EAL domain 274 502 6.0E-68 T 06-07-2017 IPR001633 EAL domain LFZ55_RS23800 33a3130f3db403702a0edf4cf564c6b7 234 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 53 234 8.6E-86 T 06-07-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 LFZ55_RS23800 33a3130f3db403702a0edf4cf564c6b7 234 Gene3D G3DSA:3.40.630.30 98 228 3.7E-14 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS23800 33a3130f3db403702a0edf4cf564c6b7 234 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 53 234 42.551 T 06-07-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 LFZ55_RS23800 33a3130f3db403702a0edf4cf564c6b7 234 SUPERFAMILY SSF55729 50 228 2.34E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS12050 61e4e2a566e23c443f163bc590cd9a28 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 4.1E-20 T 06-07-2017 IPR006750 Putative inner membrane exporter, YdcZ LFZ55_RS05350 52c89a3fc21a7c839e8438f815f84c93 394 Gene3D G3DSA:1.20.1250.20 12 188 1.0E-21 T 06-07-2017 LFZ55_RS05350 52c89a3fc21a7c839e8438f815f84c93 394 Pfam PF07690 Major Facilitator Superfamily 218 385 1.2E-8 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS05350 52c89a3fc21a7c839e8438f815f84c93 394 Pfam PF07690 Major Facilitator Superfamily 18 188 1.2E-23 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS05350 52c89a3fc21a7c839e8438f815f84c93 394 Gene3D G3DSA:1.20.1250.20 218 386 2.8E-8 T 06-07-2017 LFZ55_RS05350 52c89a3fc21a7c839e8438f815f84c93 394 SUPERFAMILY SSF103473 8 389 4.71E-51 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00605 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LFZ55_RS00605 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 06-07-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS00605 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS00605 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS00605 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 SUPERFAMILY SSF102114 27 344 2.75E-36 T 06-07-2017 LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 25 374 7.1E-127 T 06-07-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 276 350 4.8E-14 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 177 364 3.0E-10 T 06-07-2017 LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 Gene3D G3DSA:3.20.20.70 31 348 1.5E-38 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS03645 0aef34bbc930eb875f89699db28fbac6 394 Pfam PF04055 Radical SAM superfamily 31 185 1.4E-9 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 Gene3D G3DSA:1.10.240.10 206 324 1.3E-20 T 06-07-2017 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 SUPERFAMILY SSF52374 5 330 1.05E-98 T 06-07-2017 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 Gene3D G3DSA:3.40.50.620 4 205 9.6E-90 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 4.8E-90 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 4.2E-119 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LFZ55_RS01785 bba8a1ab99bda349461b4d286ef8da5f 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.661 T 06-07-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 LFZ55_RS00850 9eac8a91a13feb94746a5d35e006fece 439 Gene3D G3DSA:1.20.1250.20 15 210 1.2E-42 T 06-07-2017 LFZ55_RS00850 9eac8a91a13feb94746a5d35e006fece 439 SUPERFAMILY SSF103473 11 419 1.96E-88 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS00850 9eac8a91a13feb94746a5d35e006fece 439 Gene3D G3DSA:1.20.1250.20 238 418 1.1E-26 T 06-07-2017 LFZ55_RS00850 9eac8a91a13feb94746a5d35e006fece 439 Pfam PF07690 Major Facilitator Superfamily 24 273 2.2E-42 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS00850 9eac8a91a13feb94746a5d35e006fece 439 PIRSF PIRSF002808 2 430 6.5E-35 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 4.8E-91 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 Gene3D G3DSA:1.20.1090.10 185 386 1.3E-54 T 06-07-2017 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 SUPERFAMILY SSF56796 1 384 3.01E-106 T 06-07-2017 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS03410 3655345b63d53ce3529d1b8a70846e3b 387 Gene3D G3DSA:3.40.50.1970 1 184 3.9E-53 T 06-07-2017 LFZ55_RS02390 9ea36fae275ce800770a74a7a3e62157 351 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 8.5E-125 T 06-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 LFZ55_RS02390 9ea36fae275ce800770a74a7a3e62157 351 Pfam PF04085 rod shape-determining protein MreC 123 269 4.3E-36 T 06-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 LFZ55_RS16220 7cc959820b6c08afc30797510cea69bf 266 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 247 1.6E-34 T 06-07-2017 IPR009228 Capsid scaffolding protein GpO GO:0019069 LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 06-07-2017 IPR033379 Histidine acid phosphatase active site LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 Gene3D G3DSA:3.40.50.1240 25 141 2.4E-84 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 Gene3D G3DSA:3.40.50.1240 276 411 2.4E-84 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 SUPERFAMILY SSF53254 26 410 3.36E-77 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 06-07-2017 IPR033379 Histidine acid phosphatase active site LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 Gene3D G3DSA:3.40.50.1240 142 274 1.6E-68 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS14920 051ca99130a425eb1fdbdbe38b9383ba 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 7.7E-16 T 06-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 LFZ55_RS11265 b66e08fd6c9d13839bb71391f7c7326f 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 7.6E-8 T 06-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 LFZ55_RS11265 b66e08fd6c9d13839bb71391f7c7326f 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 34 2.0E-6 T 06-07-2017 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 Gene3D G3DSA:3.40.50.1370 5 144 1.1E-56 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 SUPERFAMILY SSF53671 4 333 1.7E-98 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.3E-131 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 2.2E-53 T 06-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 Gene3D G3DSA:3.40.50.1370 145 319 5.1E-71 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.4E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.4E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.4E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.4E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.6E-46 T 06-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LFZ55_RS21275 5af47d2be1f47ef1c9ca9e8ff9e284f9 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.924 T 06-07-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 SUPERFAMILY SSF51445 1 452 3.58E-156 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 5.3E-15 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 5.3E-15 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 5.3E-15 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 5.3E-15 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 5.3E-15 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 Gene3D G3DSA:3.20.20.80 2 453 5.7E-142 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 Pfam PF00232 Glycosyl hydrolase family 1 3 458 3.9E-132 T 06-07-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LFZ55_RS00315 0a61ce998a39e9ab8436ebf1c0a61838 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 06-07-2017 IPR018120 Glycoside hydrolase family 1, active site LFZ55_RS07725 7609ce73f322472546aed6981369f269 252 SUPERFAMILY SSF53474 10 250 2.68E-43 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS07725 7609ce73f322472546aed6981369f269 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 6.0E-18 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 LFZ55_RS07725 7609ce73f322472546aed6981369f269 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 1.5E-81 T 06-07-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 LFZ55_RS07725 7609ce73f322472546aed6981369f269 252 Gene3D G3DSA:3.40.50.1820 10 250 4.4E-58 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS07725 7609ce73f322472546aed6981369f269 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 4 251 34.105 T 06-07-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 LFZ55_RS09830 b20fa05a47ac448e985c50169cee7c91 167 SMART SM00260 14 151 5.6E-46 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS09830 b20fa05a47ac448e985c50169cee7c91 167 Gene3D G3DSA:2.30.30.40 93 144 2.2E-9 T 06-07-2017 LFZ55_RS09830 b20fa05a47ac448e985c50169cee7c91 167 Gene3D G3DSA:2.40.50.180 56 92 1.3E-10 T 06-07-2017 LFZ55_RS09830 b20fa05a47ac448e985c50169cee7c91 167 Pfam PF01584 CheW-like domain 18 154 4.8E-37 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS09830 b20fa05a47ac448e985c50169cee7c91 167 SUPERFAMILY SSF50341 16 156 6.41E-39 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LFZ55_RS05560 343251606a86d7ec0eda28c4d64cfe56 371 Gene3D G3DSA:3.40.50.2000 196 351 4.4E-21 T 06-07-2017 LFZ55_RS05560 343251606a86d7ec0eda28c4d64cfe56 371 Pfam PF06722 Protein of unknown function (DUF1205) 165 260 1.2E-36 T 06-07-2017 IPR010610 Domain of unknown function DUF1205 LFZ55_RS05560 343251606a86d7ec0eda28c4d64cfe56 371 Gene3D G3DSA:3.40.50.2000 1 139 1.9E-15 T 06-07-2017 LFZ55_RS05560 343251606a86d7ec0eda28c4d64cfe56 371 SUPERFAMILY SSF53756 1 369 4.97E-70 T 06-07-2017 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 1.3E-133 T 06-07-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 Gene3D G3DSA:3.40.630.10 44 235 7.5E-17 T 06-07-2017 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 318 1.2E-73 T 06-07-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 SUPERFAMILY SSF53187 1 320 3.01E-93 T 06-07-2017 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 PIRSF PIRSF017020 1 322 4.1E-115 T 06-07-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 LFZ55_RS13650 5bca6101b91dff5ce24d2e1d0d8ae7c2 322 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 322 156.067 T 06-07-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 LFZ55_RS01525 e1341f9925f67be3e5566a3f3f590466 345 SUPERFAMILY SSF51735 3 195 2.12E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01525 e1341f9925f67be3e5566a3f3f590466 345 Gene3D G3DSA:3.40.50.720 3 145 1.6E-39 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS01525 e1341f9925f67be3e5566a3f3f590466 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 7.9E-15 T 06-07-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LFZ55_RS01525 e1341f9925f67be3e5566a3f3f590466 345 Gene3D G3DSA:3.30.360.10 146 336 4.7E-27 T 06-07-2017 LFZ55_RS01525 e1341f9925f67be3e5566a3f3f590466 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 1.7E-26 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LFZ55_RS16805 6d3efae53ad58d24e0e637f60e1f6a84 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 341 3.4E-121 T 06-07-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 LFZ55_RS16805 6d3efae53ad58d24e0e637f60e1f6a84 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 2.5E-100 T 06-07-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 LFZ55_RS16805 6d3efae53ad58d24e0e637f60e1f6a84 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.347 T 06-07-2017 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 LFZ55_RS16805 6d3efae53ad58d24e0e637f60e1f6a84 347 SUPERFAMILY SSF142754 29 341 1.57E-105 T 06-07-2017 LFZ55_RS08910 9094e74e0534997eccbcb0ce22fa212e 452 Pfam PF13520 Amino acid permease 57 408 4.1E-35 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS08910 9094e74e0534997eccbcb0ce22fa212e 452 PIRSF PIRSF006060 2 446 1.9E-72 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS17265 0f6fd110c317cb157d302491d5bd8d66 348 SUPERFAMILY SSF52540 117 318 3.7E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17265 0f6fd110c317cb157d302491d5bd8d66 348 Gene3D G3DSA:3.40.50.300 118 321 2.5E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17265 0f6fd110c317cb157d302491d5bd8d66 348 Pfam PF02562 PhoH-like protein 118 321 1.5E-95 T 06-07-2017 IPR003714 PhoH-like protein GO:0005524 LFZ55_RS11685 6aa484b6362b82dc4946505045eb5e4a 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 63 1.0E-21 T 06-07-2017 LFZ55_RS11685 6aa484b6362b82dc4946505045eb5e4a 63 Pfam PF13617 YnbE-like lipoprotein 7 61 9.8E-29 T 06-07-2017 IPR025985 YnbE-like lipoprotein LFZ55_RS17815 bea49ca9b844ffc692fbccdab23b524b 870 Pfam PF00577 Outer membrane usher protein 200 778 2.6E-224 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS17815 bea49ca9b844ffc692fbccdab23b524b 870 Pfam PF13954 PapC N-terminal domain 39 188 3.5E-49 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS17815 bea49ca9b844ffc692fbccdab23b524b 870 Pfam PF13953 PapC C-terminal domain 788 850 1.1E-19 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS17815 bea49ca9b844ffc692fbccdab23b524b 870 SUPERFAMILY SSF141729 37 166 1.57E-33 T 06-07-2017 LFZ55_RS17815 bea49ca9b844ffc692fbccdab23b524b 870 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 314 324 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 Gene3D G3DSA:2.40.160.20 29 178 2.9E-29 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 SUPERFAMILY SSF56925 32 178 2.62E-21 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 170 178 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 47 59 3.5E-14 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 133 154 3.5E-14 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 89 112 3.5E-14 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 LFZ55_RS04240 6764d54d4db90bb6ab440f6e35ae43e9 178 Pfam PF13505 Outer membrane protein beta-barrel domain 12 178 4.6E-18 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel LFZ55_RS16800 a6ad887550a38be2e5d54eb98262a807 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 3.8E-51 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LFZ55_RS16800 a6ad887550a38be2e5d54eb98262a807 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 1.5E-69 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LFZ55_RS09915 27437ad545390b685f6d2fa9d7bc8771 131 Gene3D G3DSA:1.20.120.550 4 127 1.3E-22 T 06-07-2017 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain LFZ55_RS09915 27437ad545390b685f6d2fa9d7bc8771 131 SUPERFAMILY SSF161084 4 127 1.83E-30 T 06-07-2017 LFZ55_RS09915 27437ad545390b685f6d2fa9d7bc8771 131 Pfam PF01124 MAPEG family 3 120 6.7E-26 T 06-07-2017 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 6.9E-7 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.555 T 06-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 SUPERFAMILY SSF52540 3 441 4.87E-93 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Gene3D G3DSA:1.10.8.60 335 443 5.7E-34 T 06-07-2017 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 SMART SM00382 49 332 1.9E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Gene3D G3DSA:3.40.50.300 3 110 1.8E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Gene3D G3DSA:3.40.50.300 245 331 1.8E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 1.3E-42 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.3E-235 T 06-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Gene3D G3DSA:1.10.8.10 213 243 9.3E-34 T 06-07-2017 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Gene3D G3DSA:1.10.8.10 111 177 9.3E-34 T 06-07-2017 LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.7E-5 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS23070 5cd3963454e85992b546cc88e4fb1f25 443 SMART SM01086 335 434 1.7E-20 T 06-07-2017 IPR019489 Clp ATPase, C-terminal LFZ55_RS20770 ed973b3cc240be7591ccf201699e0876 334 Gene3D G3DSA:2.40.160.40 22 334 1.3E-75 T 06-07-2017 LFZ55_RS05065 c184db8a11989fefd575a4380f74b113 223 ProDom PD038222 INVASION PLASMID OXYGEN-REGULATED III SECRETION MXIN TYPE SYSTEM PATHWAY ORGB 18 213 3.0E-112 T 06-07-2017 LFZ55_RS09550 d727da06d86c47d5ab15cecc7598cee7 155 Pfam PF03748 Flagellar basal body-associated protein FliL 57 153 1.8E-20 T 06-07-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 Pfam PF00294 pfkB family carbohydrate kinase 12 296 8.1E-63 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 SUPERFAMILY SSF53613 4 297 5.77E-63 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 306 7.7E-98 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 PIRSF PIRSF000535 1 310 6.3E-109 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LFZ55_RS13545 06b0cdc94fd8d17fa707cb1e8a915ff4 310 Gene3D G3DSA:3.40.1190.20 35 305 2.9E-75 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 Pfam PF03796 DnaB-like helicase C terminal domain 185 442 5.4E-93 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 Gene3D G3DSA:3.40.50.300 179 445 1.5E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 444 3.2E-149 T 06-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 SUPERFAMILY SSF48024 8 117 7.59E-36 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 Gene3D G3DSA:1.10.860.10 9 109 2.4E-37 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 SUPERFAMILY SSF52540 184 255 1.57E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 SUPERFAMILY SSF52540 282 436 1.57E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS20845 ce2d6b34e024af7366e05aa5c1938cd7 451 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 1.3E-34 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LFZ55_RS14935 b0e08c5f9c141a308286e9e40acf39c3 628 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 285 489 4.5E-7 T 06-07-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LFZ55_RS14935 b0e08c5f9c141a308286e9e40acf39c3 628 Pfam PF11412 Disulphide bond corrector protein DsbC 44 144 5.1E-16 T 06-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LFZ55_RS14935 b0e08c5f9c141a308286e9e40acf39c3 628 Gene3D G3DSA:3.40.30.10 510 623 1.2E-14 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14935 b0e08c5f9c141a308286e9e40acf39c3 628 SUPERFAMILY SSF52833 504 622 1.81E-13 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS14935 b0e08c5f9c141a308286e9e40acf39c3 628 Pfam PF13899 Thioredoxin-like 513 598 5.4E-15 T 06-07-2017 LFZ55_RS18385 6699108bdd46567bdb6adb572def178e 115 Pfam PF01844 HNH endonuclease 27 75 6.4E-12 T 06-07-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LFZ55_RS18385 6699108bdd46567bdb6adb572def178e 115 SMART SM00507 15 70 2.1E-6 T 06-07-2017 IPR003615 HNH nuclease LFZ55_RS00930 075a9c20acebfb438cff5d31f7c13622 100 Pfam PF13983 YsaB-like lipoprotein 26 100 2.8E-42 T 06-07-2017 IPR025728 YsaB-like lipoprotein LFZ55_RS23680 7682d5a4d8a79c5d84106a1090cbba3a 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 2.4E-114 T 06-07-2017 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 LFZ55_RS23680 7682d5a4d8a79c5d84106a1090cbba3a 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 06-07-2017 LFZ55_RS23680 7682d5a4d8a79c5d84106a1090cbba3a 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 1.9E-56 T 06-07-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LFZ55_RS23680 7682d5a4d8a79c5d84106a1090cbba3a 316 SUPERFAMILY SSF143865 1 255 7.72E-38 T 06-07-2017 LFZ55_RS23680 7682d5a4d8a79c5d84106a1090cbba3a 316 Gene3D G3DSA:1.20.58.340 240 316 2.6E-28 T 06-07-2017 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.9E-84 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 SUPERFAMILY SSF53383 2 396 7.72E-117 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.1E-38 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 5.1E-38 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 5.1E-38 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.1E-38 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 06-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LFZ55_RS22445 df0f1a44a04e90199112a880c54951ef 397 Gene3D G3DSA:3.40.640.10 46 316 2.8E-104 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS03045 a9dc030ac52339df969e9e9d668eb30f 121 Pfam PF05656 Protein of unknown function (DUF805) 11 117 1.7E-34 T 06-07-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 LFZ55_RS03035 91ad4800500fb69aab04690e7b31f938 233 Gene3D G3DSA:2.60.120.10 3 231 4.6E-30 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS03035 91ad4800500fb69aab04690e7b31f938 233 SUPERFAMILY SSF51182 1 231 3.56E-43 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS03035 91ad4800500fb69aab04690e7b31f938 233 Pfam PF02678 Pirin 5 119 3.1E-22 T 06-07-2017 IPR003829 Pirin, N-terminal domain LFZ55_RS03035 91ad4800500fb69aab04690e7b31f938 233 PIRSF PIRSF006232 1 230 3.5E-30 T 06-07-2017 IPR012093 Pirin LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 323 44.689 T 06-07-2017 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 SMART SM00530 18 79 6.1E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 Pfam PF13464 Domain of unknown function (DUF4115) 246 320 8.8E-24 T 06-07-2017 IPR025194 Domain of unknown function DUF4115 LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 Gene3D G3DSA:1.10.260.40 6 86 1.4E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 Pfam PF13413 Helix-turn-helix domain 18 78 6.5E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS06265 5c8660e25f85f4a12b4cddfcfb9201d4 328 SUPERFAMILY SSF47413 14 83 2.23E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS20940 dcfa3ef57b698dff1d858e46d54fcc98 177 SUPERFAMILY SSF53955 94 161 1.05E-14 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS20940 dcfa3ef57b698dff1d858e46d54fcc98 177 SUPERFAMILY SSF53955 23 66 1.05E-14 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS20940 dcfa3ef57b698dff1d858e46d54fcc98 177 Gene3D G3DSA:1.10.530.10 19 149 1.0E-9 T 06-07-2017 LFZ55_RS20940 dcfa3ef57b698dff1d858e46d54fcc98 177 Pfam PF01464 Transglycosylase SLT domain 27 149 9.7E-5 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS15380 4a82db0653241ca6c66e3e30bb25e9a8 203 Pfam PF12787 EcsC protein family 43 192 8.6E-7 T 06-07-2017 IPR024787 EcsC protein LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 Gene3D G3DSA:3.60.20.10 2 173 1.1E-84 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.934 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 Pfam PF00227 Proteasome subunit 2 167 3.9E-23 T 06-07-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.7E-86 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 SUPERFAMILY SSF56235 2 172 1.4E-58 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS23065 8119d74589aa5bdc702cf875c265b899 176 PIRSF PIRSF039093 1 175 1.4E-87 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 Gene3D G3DSA:2.60.300.12 2 96 4.7E-35 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 8.0E-38 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 45.393 T 06-07-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.6E-61 T 06-07-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 SUPERFAMILY SSF89360 1 96 3.14E-32 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS06175 0ae6559f0aae2b94182902ae7e17b79a 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.5E-26 T 06-07-2017 IPR000361 FeS cluster biogenesis LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 PIRSF PIRSF039144 1 112 9.6E-58 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 SMART SM00938 4 105 4.1E-68 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 06-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 06-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 LFZ55_RS06080 8ceb698f0aa0b9491fc60d01c78bde64 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-51 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LFZ55_RS12825 9606e67e0cbecbb4c9edbdde07cfcdc9 460 Pfam PF13520 Amino acid permease 5 439 3.2E-75 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS12825 9606e67e0cbecbb4c9edbdde07cfcdc9 460 PIRSF PIRSF006060 1 459 3.0E-45 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS12825 9606e67e0cbecbb4c9edbdde07cfcdc9 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 1.2E-181 T 06-07-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 3.0E-165 T 06-07-2017 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 SUPERFAMILY SSF53686 3 289 4.58E-93 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.2E-125 T 06-07-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 06-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 Gene3D G3DSA:3.40.50.1100 2 39 7.4E-81 T 06-07-2017 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 Gene3D G3DSA:3.40.50.1100 146 297 7.4E-81 T 06-07-2017 LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 1.5E-68 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LFZ55_RS07040 be4c52ac7f394bed2942cd5091b1fda9 303 Gene3D G3DSA:3.40.50.1100 40 139 9.5E-40 T 06-07-2017 LFZ55_RS23235 bb5664bd2e2604b1c7eadca60fedd323 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 7.3E-12 T 06-07-2017 IPR008407 Branched-chain amino acid transport, AzlD LFZ55_RS11920 45d0706ccdd4f543ac50ccabc9e7dc91 326 SUPERFAMILY SSF51161 4 316 2.85E-64 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS11920 45d0706ccdd4f543ac50ccabc9e7dc91 326 Gene3D G3DSA:2.160.10.10 234 296 7.6E-8 T 06-07-2017 LFZ55_RS11920 45d0706ccdd4f543ac50ccabc9e7dc91 326 Gene3D G3DSA:2.160.10.10 48 134 7.6E-20 T 06-07-2017 LFZ55_RS11920 45d0706ccdd4f543ac50ccabc9e7dc91 326 Gene3D G3DSA:2.160.10.10 180 219 7.6E-20 T 06-07-2017 LFZ55_RS08140 e24b526782b6253f4560638925df62fc 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 7.1E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08140 e24b526782b6253f4560638925df62fc 364 Gene3D G3DSA:1.10.3720.10 131 351 6.3E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS08140 e24b526782b6253f4560638925df62fc 364 SUPERFAMILY SSF161098 131 346 3.66E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16565 7e67cfbb1be375eb97f66a347633434a 320 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 2.5E-17 T 06-07-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LFZ55_RS18920 b5c12553e406b89468289c9db99b1071 173 Pfam PF03433 EspA-like secreted protein 39 163 3.0E-13 T 06-07-2017 IPR005095 EspA-like secreted protein LFZ55_RS18920 b5c12553e406b89468289c9db99b1071 173 SUPERFAMILY SSF116927 28 169 7.59E-18 T 06-07-2017 LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 SUPERFAMILY SSF69721 2 109 6.15E-42 T 06-07-2017 IPR025526 DsrC-like domain LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 Pfam PF04358 DsrC like protein 4 109 5.6E-46 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 Gene3D G3DSA:1.10.10.370 40 109 2.8E-38 T 06-07-2017 LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 Gene3D G3DSA:3.30.1420.10 1 39 1.8E-11 T 06-07-2017 LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 1.4E-49 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE LFZ55_RS15480 6a7b492d82ed986cefde196de9741ba9 109 PIRSF PIRSF006223 2 109 1.3E-46 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE LFZ55_RS03940 9612050b7377ebeb1d5d4a7bab5bf7d7 238 Gene3D G3DSA:3.40.50.300 8 230 3.5E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03940 9612050b7377ebeb1d5d4a7bab5bf7d7 238 SUPERFAMILY SSF52540 22 219 2.87E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS11375 b611b1b8de8752ff9eec49d759b66c50 32 Pfam PF13438 Domain of unknown function (DUF4113) 1 31 1.2E-6 T 06-07-2017 IPR025188 Domain of unknown function DUF4113 LFZ55_RS23110 33cc4aeb07311b5eae65f5e3c85366ec 142 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.9E-18 T 06-07-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 LFZ55_RS06390 8887028149d3b3ded179ad343b060250 261 Pfam PF06992 Replication protein P 3 203 1.5E-30 T 06-07-2017 IPR009731 Replication P GO:0006270 LFZ55_RS09385 baa9aaaf1d4258cad7173c6d5a86ca89 487 Pfam PF01554 MatE 278 439 1.0E-19 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS09385 baa9aaaf1d4258cad7173c6d5a86ca89 487 Pfam PF01554 MatE 48 208 3.5E-35 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS09385 baa9aaaf1d4258cad7173c6d5a86ca89 487 TIGRFAM TIGR00797 matE: MATE efflux family protein 48 452 3.5E-66 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS09385 baa9aaaf1d4258cad7173c6d5a86ca89 487 PIRSF PIRSF006603 30 486 6.0E-69 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS02355 add7ac6531b9af3bd69429a9e658ba30 199 Pfam PF01794 Ferric reductase like transmembrane component 51 161 5.9E-15 T 06-07-2017 IPR013130 Ferric reductase transmembrane component-like domain LFZ55_RS02355 add7ac6531b9af3bd69429a9e658ba30 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 199 24.533 T 06-07-2017 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 LFZ55_RS01480 f3e311c2c139e099260b4cd4144bf008 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 3.0E-41 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LFZ55_RS01480 f3e311c2c139e099260b4cd4144bf008 246 Gene3D G3DSA:3.20.20.190 3 240 4.3E-63 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS01480 f3e311c2c139e099260b4cd4144bf008 246 SUPERFAMILY SSF51695 5 238 3.66E-63 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Pfam PF02142 MGS-like domain 19 132 6.4E-31 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 7.8E-268 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 PIRSF PIRSF000414 1 529 5.3E-227 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 6.2E-120 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 SMART SM00851 19 132 6.2E-64 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Gene3D G3DSA:3.40.140.20 253 370 1.2E-49 T 06-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Gene3D G3DSA:3.40.50.1380 5 190 2.9E-86 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 SMART SM00798 137 461 2.8E-215 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 SUPERFAMILY SSF52335 7 197 9.68E-72 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Gene3D G3DSA:3.40.140.20 377 519 1.8E-60 T 06-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.396 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LFZ55_RS22700 477fec2a463e70e3775f317437985082 529 SUPERFAMILY SSF53927 221 529 9.93E-131 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 LFZ55_RS07925 0b9dd5adee5f7cb559da56986e2ac08e 87 Pfam PF03927 NapD protein 5 81 3.1E-25 T 06-07-2017 IPR005623 Chaperone NapD, nitrate reductase assembly LFZ55_RS09170 0d83950243e28de13c1d8e611bb81eab 309 Gene3D G3DSA:2.40.440.10 90 231 1.7E-35 T 06-07-2017 LFZ55_RS09170 0d83950243e28de13c1d8e611bb81eab 309 Pfam PF03734 L,D-transpeptidase catalytic domain 97 230 3.1E-17 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LFZ55_RS09170 0d83950243e28de13c1d8e611bb81eab 309 SUPERFAMILY SSF141523 96 145 3.27E-28 T 06-07-2017 LFZ55_RS09170 0d83950243e28de13c1d8e611bb81eab 309 SUPERFAMILY SSF141523 174 231 3.27E-28 T 06-07-2017 LFZ55_RS12775 db9f70b501b56e55ee4fbc493b335705 96 Hamap MF_00546 Acid shock protein [asr]. 10 96 14.92 T 06-07-2017 IPR023497 Acid shock protein LFZ55_RS19940 83937bc39e7ee5a4ea4bd24102dab2d6 329 SUPERFAMILY SSF53659 4 327 4.48E-116 T 06-07-2017 LFZ55_RS19940 83937bc39e7ee5a4ea4bd24102dab2d6 329 Gene3D G3DSA:3.40.718.10 2 327 1.6E-135 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LFZ55_RS19940 83937bc39e7ee5a4ea4bd24102dab2d6 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 35.485 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS19940 83937bc39e7ee5a4ea4bd24102dab2d6 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 2.7E-106 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS19940 83937bc39e7ee5a4ea4bd24102dab2d6 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.2E-128 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 LFZ55_RS11680 c778e3f9d3a3c81b2e60f03123fd8a1a 878 Pfam PF11739 Dicarboxylate transport 657 858 1.1E-61 T 06-07-2017 IPR021730 Dicarboxylate transport LFZ55_RS16160 0e7fdaac3decdec8c45969eb67069988 95 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 14 94 2.0E-40 T 06-07-2017 IPR024406 Phage tail assembly chaperone TAC_10 LFZ55_RS16160 0e7fdaac3decdec8c45969eb67069988 95 Pfam PF10963 Phage tail assembly chaperone 14 95 3.0E-35 T 06-07-2017 IPR024406 Phage tail assembly chaperone TAC_10 LFZ55_RS09860 049f899b253ae28dedaccd21e324f6b5 214 SUPERFAMILY SSF75708 11 213 5.49E-68 T 06-07-2017 LFZ55_RS09860 049f899b253ae28dedaccd21e324f6b5 214 PIRSF PIRSF002884 2 214 9.6E-89 T 06-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 LFZ55_RS09860 049f899b253ae28dedaccd21e324f6b5 214 Gene3D G3DSA:1.10.287.500 35 167 2.6E-57 T 06-07-2017 LFZ55_RS09860 049f899b253ae28dedaccd21e324f6b5 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 5.6E-78 T 06-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 LFZ55_RS09860 049f899b253ae28dedaccd21e324f6b5 214 Gene3D G3DSA:1.20.5.590 1 34 2.7E-22 T 06-07-2017 LFZ55_RS03625 63404f30f91824de24df08fa24a5cada 124 Gene3D G3DSA:2.60.120.10 25 115 7.7E-22 T 06-07-2017 IPR014710 RmlC-like jelly roll fold LFZ55_RS03625 63404f30f91824de24df08fa24a5cada 124 Pfam PF05899 Protein of unknown function (DUF861) 41 114 1.7E-19 T 06-07-2017 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 LFZ55_RS03625 63404f30f91824de24df08fa24a5cada 124 SUPERFAMILY SSF51182 26 115 6.89E-17 T 06-07-2017 IPR011051 RmlC-like cupin domain LFZ55_RS03225 7b54cc21dc210d57b10c10d489fa1044 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.481 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LFZ55_RS03225 7b54cc21dc210d57b10c10d489fa1044 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.8E-50 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LFZ55_RS03225 7b54cc21dc210d57b10c10d489fa1044 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 5.6E-83 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LFZ55_RS03225 7b54cc21dc210d57b10c10d489fa1044 205 SMART SM01207 10 185 7.6E-86 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LFZ55_RS24015 d9622b7c93540c2c03b3c5700372af69 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.521 T 06-07-2017 IPR023051 Potassium uptake protein, low affinity, Kup LFZ55_RS24015 d9622b7c93540c2c03b3c5700372af69 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 5.4E-199 T 06-07-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LFZ55_RS24015 d9622b7c93540c2c03b3c5700372af69 622 Pfam PF02705 K+ potassium transporter 14 544 4.7E-207 T 06-07-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LFZ55_RS02310 699313c16228c8246c85d953bc5892fc 54 ProDom PD052549 YHDU TRANSMEMBRANE MEMBRANE PERIPLASMIC 1 54 4.0E-25 T 06-07-2017 IPR022540 Protein of unknown function DUF2556 LFZ55_RS02310 699313c16228c8246c85d953bc5892fc 54 Pfam PF10831 Protein of unknown function (DUF2556) 1 53 2.1E-39 T 06-07-2017 IPR022540 Protein of unknown function DUF2556 LFZ55_RS13050 5e7baf970d711d947aafff22da08570f 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LFZ55_RS13050 5e7baf970d711d947aafff22da08570f 115 Gene3D G3DSA:3.40.30.10 8 102 1.7E-32 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS13050 5e7baf970d711d947aafff22da08570f 115 SUPERFAMILY SSF52833 2 104 1.36E-35 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS13050 5e7baf970d711d947aafff22da08570f 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 3.7E-47 T 06-07-2017 IPR004480 Monothiol glutaredoxin-related LFZ55_RS13050 5e7baf970d711d947aafff22da08570f 115 PIRSF PIRSF005894 1 108 9.0E-53 T 06-07-2017 IPR014434 Monothiol glutaredoxin LFZ55_RS10145 6f94daad44837fa5a0bb015949200d10 68 PIRSF PIRSF030786 1 64 1.3E-19 T 06-07-2017 IPR007054 Lysis protein S LFZ55_RS10145 6f94daad44837fa5a0bb015949200d10 68 Pfam PF04971 Bacteriophage P21 holin S 1 56 5.7E-17 T 06-07-2017 IPR007054 Lysis protein S LFZ55_RS13975 e2bb4226d80b0b7a27bc336bc20c814f 176 SUPERFAMILY SSF81342 3 175 8.63E-28 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS13975 e2bb4226d80b0b7a27bc336bc20c814f 176 Pfam PF01292 Prokaryotic cytochrome b561 4 174 1.9E-21 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 Gene3D G3DSA:3.40.1190.20 6 307 1.0E-98 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 5.8E-76 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 3.8E-109 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 PRINTS PR00990 Ribokinase signature 36 55 5.9E-38 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 PRINTS PR00990 Ribokinase signature 220 231 5.9E-38 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 PRINTS PR00990 Ribokinase signature 9 30 5.9E-38 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 PRINTS PR00990 Ribokinase signature 108 121 5.9E-38 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 PRINTS PR00990 Ribokinase signature 176 191 5.9E-38 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 26.022 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LFZ55_RS23990 2d394d40fcccbb589489a138b1623486 309 SUPERFAMILY SSF53613 6 305 4.52E-86 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS11640 4a511588fc07ff4a1d88400ccf5fc096 112 SUPERFAMILY SSF103481 7 108 7.85E-24 T 06-07-2017 LFZ55_RS11640 4a511588fc07ff4a1d88400ccf5fc096 112 Pfam PF00893 Small Multidrug Resistance protein 6 96 1.5E-27 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 LFZ55_RS17700 01699818d14fec95269f426de3c7e243 557 Pfam PF02264 LamB porin 147 557 1.1E-75 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS17700 01699818d14fec95269f426de3c7e243 557 Gene3D G3DSA:2.40.170.10 145 557 5.2E-110 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS17700 01699818d14fec95269f426de3c7e243 557 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 152 552 0.0 T 06-07-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LFZ55_RS17700 01699818d14fec95269f426de3c7e243 557 Pfam PF11471 Maltoporin periplasmic N-terminal extension 7 56 7.2E-10 T 06-07-2017 IPR021570 LamB-type porin N-terminal domain LFZ55_RS17700 01699818d14fec95269f426de3c7e243 557 SUPERFAMILY SSF56935 145 557 6.1E-91 T 06-07-2017 LFZ55_RS08505 d9bf0ac55ca38eb7c81c19650ec38c64 93 Pfam PF10836 Protein of unknown function (DUF2574) 1 93 1.2E-49 T 06-07-2017 IPR020386 Uncharacterised protein family YehE LFZ55_RS08505 d9bf0ac55ca38eb7c81c19650ec38c64 93 ProDom PD064930 YEHE MEMBRANE OUTER STY2382 PRECURSOR ECS2918 SIGNAL 1 83 5.0E-40 T 06-07-2017 IPR020386 Uncharacterised protein family YehE LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 Pfam PF13353 4Fe-4S single cluster domain 16 137 2.5E-5 T 06-07-2017 LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 160 391 3.0E-17 T 06-07-2017 LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 269 355 1.5E-16 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 SUPERFAMILY SSF102114 15 338 2.49E-41 T 06-07-2017 LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 Pfam PF04055 Radical SAM superfamily 15 155 2.5E-9 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 Pfam PF13186 Iron-sulfur cluster-binding domain 270 329 1.4E-8 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 7 374 7.6E-150 T 06-07-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 LFZ55_RS13770 16f56f8c5b96cf4cd66afa42610f7512 398 Gene3D G3DSA:3.20.20.70 16 345 1.7E-40 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS12500 db80e16cb94c1430c3fe383ccc92a2a0 295 SUPERFAMILY SSF56762 22 290 8.52E-11 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS12500 db80e16cb94c1430c3fe383ccc92a2a0 295 Gene3D G3DSA:1.10.645.10 214 290 3.1E-7 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS21065 531002e1e3fa8e8a605e482262359b5c 725 Pfam PF10593 Z1 domain 298 509 4.8E-41 T 06-07-2017 IPR018310 Putative endonuclease, Z1 domain LFZ55_RS21065 531002e1e3fa8e8a605e482262359b5c 725 SUPERFAMILY SSF52540 161 240 7.18E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21065 531002e1e3fa8e8a605e482262359b5c 725 SUPERFAMILY SSF52540 56 130 7.18E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21065 531002e1e3fa8e8a605e482262359b5c 725 Gene3D G3DSA:3.40.50.300 56 238 3.7E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09905 67cb505999ca2942cd822041b8f88ae8 323 Gene3D G3DSA:3.40.50.150 91 316 9.5E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS09905 67cb505999ca2942cd822041b8f88ae8 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 2.5E-170 T 06-07-2017 IPR027555 tRNA (mo5U34)-methyltransferase-like LFZ55_RS09905 67cb505999ca2942cd822041b8f88ae8 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.92 T 06-07-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 LFZ55_RS09905 67cb505999ca2942cd822041b8f88ae8 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 4.4E-148 T 06-07-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 LFZ55_RS09905 67cb505999ca2942cd822041b8f88ae8 323 SUPERFAMILY SSF53335 91 323 7.55E-34 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS13550 76cade7ef00dd01bf5c963dc315a2284 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 94 3.0E-47 T 06-07-2017 IPR020499 Uncharacterised protein family YdiZ LFZ55_RS13550 76cade7ef00dd01bf5c963dc315a2284 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 94 7.4E-43 T 06-07-2017 IPR022597 Endoribonuclease GhoS GO:0004521 LFZ55_RS08810 9424ad020d8a1161ba54a33dcfc0fca5 373 Pfam PF14897 EpsG family 30 340 7.3E-34 T 06-07-2017 LFZ55_RS12055 1782e334a03adfe3c817fdc5a6ac7d54 172 Gene3D G3DSA:3.40.630.30 1 165 3.4E-41 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS12055 1782e334a03adfe3c817fdc5a6ac7d54 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 8.5E-18 T 06-07-2017 LFZ55_RS12055 1782e334a03adfe3c817fdc5a6ac7d54 172 SUPERFAMILY SSF55729 2 164 1.66E-34 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS12190 d4c217ebacee2ba9078f9aa12d75ab90 71 Pfam PF10684 Putative biofilm-dependent modulation protein 1 71 1.2E-51 T 06-07-2017 IPR019625 Biofilm-dependent modulation protein Bdm, putative LFZ55_RS10435 e1c4eed9456acb3b8a1a1eeec9ef1f92 231 SUPERFAMILY SSF53067 3 105 2.16E-31 T 06-07-2017 LFZ55_RS10435 e1c4eed9456acb3b8a1a1eeec9ef1f92 231 SUPERFAMILY SSF53067 108 217 6.09E-30 T 06-07-2017 LFZ55_RS10435 e1c4eed9456acb3b8a1a1eeec9ef1f92 231 Gene3D G3DSA:3.30.420.40 1 132 8.6E-47 T 06-07-2017 LFZ55_RS10435 e1c4eed9456acb3b8a1a1eeec9ef1f92 231 Pfam PF00814 Glycoprotease family 28 148 9.9E-30 T 06-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LFZ55_RS10435 e1c4eed9456acb3b8a1a1eeec9ef1f92 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 2.4E-70 T 06-07-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 291 310 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 480 497 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 261 277 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 391 409 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 433 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 471 1.8E-80 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 391 415 - T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 571 5.8E-229 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 SUPERFAMILY SSF56235 41 572 2.7E-198 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS01490 ff3af86618b61a1cf162a753a026afe1 580 Pfam PF01019 Gamma-glutamyltranspeptidase 64 572 1.6E-190 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 06-07-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 Gene3D G3DSA:1.10.1040.10 280 484 3.6E-73 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 6.1E-51 T 06-07-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 459 8.7E-94 T 06-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 Gene3D G3DSA:3.40.50.720 3 278 2.8E-112 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.7E-21 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.7E-21 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.7E-21 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.7E-21 T 06-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 SUPERFAMILY SSF48179 280 483 1.97E-64 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LFZ55_RS12645 41cab00e801fde2ed37859bd765154ac 488 SUPERFAMILY SSF51735 4 278 3.11E-95 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS02950 fd2abe6a1b9337c7d76580009595705f 282 SMART SM00862 25 103 2.1E-6 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS02950 fd2abe6a1b9337c7d76580009595705f 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 8.4E-9 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS02950 fd2abe6a1b9337c7d76580009595705f 282 SUPERFAMILY SSF46894 22 102 1.53E-8 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS02950 fd2abe6a1b9337c7d76580009595705f 282 Gene3D G3DSA:1.10.10.10 18 105 4.0E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13590 c21a731a13e432e3942c2f2f817740b5 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 39.172 T 06-07-2017 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 LFZ55_RS13590 c21a731a13e432e3942c2f2f817740b5 252 SUPERFAMILY SSF88713 1 252 3.56E-74 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS13590 c21a731a13e432e3942c2f2f817740b5 252 Pfam PF04794 YdjC-like protein 5 240 6.3E-58 T 06-07-2017 IPR006879 Chitooligosaccharide deacetylase ChbG-like LFZ55_RS13590 c21a731a13e432e3942c2f2f817740b5 252 Gene3D G3DSA:3.20.20.370 1 252 6.9E-80 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS16365 fd111f7d59e365f7ee4b1c184aedb3d0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.2E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16365 fd111f7d59e365f7ee4b1c184aedb3d0 306 SUPERFAMILY SSF161098 90 288 1.44E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16365 fd111f7d59e365f7ee4b1c184aedb3d0 306 Gene3D G3DSA:1.10.3720.10 88 301 2.1E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS13090 d85d3459c85ebdf9881c96f445583263 382 PIRSF PIRSF003085 2 381 7.1E-129 T 06-07-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 LFZ55_RS13090 d85d3459c85ebdf9881c96f445583263 382 SUPERFAMILY SSF53335 117 373 1.04E-80 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS13090 d85d3459c85ebdf9881c96f445583263 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 2.6E-104 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS13090 d85d3459c85ebdf9881c96f445583263 382 Gene3D G3DSA:3.40.50.150 117 372 8.3E-97 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.496 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.3E-15 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 Gene3D G3DSA:3.30.930.10 157 500 1.4E-121 T 06-07-2017 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 SUPERFAMILY SSF50249 13 155 7.35E-48 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 Gene3D G3DSA:2.40.50.140 16 154 5.7E-50 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 SUPERFAMILY SSF55681 162 502 3.2E-121 T 06-07-2017 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.5E-238 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PIRSF PIRSF039101 1 505 2.8E-206 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LFZ55_RS04165 bca3ccc91564f7c93044e57f1a478b92 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.7E-81 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS17070 24ebc42ca236b8c22aa3def4d2c6b7bc 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 1.7E-282 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LFZ55_RS17070 24ebc42ca236b8c22aa3def4d2c6b7bc 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 34.91 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LFZ55_RS17070 24ebc42ca236b8c22aa3def4d2c6b7bc 559 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 3.5E-240 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LFZ55_RS17070 24ebc42ca236b8c22aa3def4d2c6b7bc 559 PIRSF PIRSF001294 1 559 1.5E-235 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LFZ55_RS05675 3f7097041cc85f6fcb155456d387b104 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 6.0E-19 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type LFZ55_RS06410 630e123df5662d480bd6a8e43e06cc39 228 Pfam PF13935 Ead/Ea22-like protein 2 132 3.8E-24 T 06-07-2017 IPR025153 Ead/Ea22-like protein LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 Pfam PF01455 HupF/HypC family 1 66 3.2E-12 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 SUPERFAMILY SSF159127 1 77 1.96E-15 T 06-07-2017 LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 8.7E-6 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 8.7E-6 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 8.7E-6 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS12485 44a0716af30fdd92eaeda832e56b1d4a 99 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 76 7.5E-17 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC LFZ55_RS11410 bf89ee4eb139514fe56b524a1e619a30 76 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 1.1E-34 T 06-07-2017 IPR014321 Phage shock protein, PspD LFZ55_RS11410 bf89ee4eb139514fe56b524a1e619a30 76 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 3.9E-32 T 06-07-2017 IPR014321 Phage shock protein, PspD LFZ55_RS16580 54ffe622d00ede765d7a4833d10a1a33 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 83 3.1E-26 T 06-07-2017 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 LFZ55_RS16580 54ffe622d00ede765d7a4833d10a1a33 83 Pfam PF02597 ThiS family 6 83 2.4E-22 T 06-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 LFZ55_RS16580 54ffe622d00ede765d7a4833d10a1a33 83 SUPERFAMILY SSF54285 3 83 4.49E-24 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LFZ55_RS16580 54ffe622d00ede765d7a4833d10a1a33 83 Gene3D G3DSA:3.10.20.30 3 83 1.4E-26 T 06-07-2017 IPR012675 Beta-grasp domain LFZ55_RS05520 4ef1e48c1ebd37139924aa9ae8501224 298 Pfam PF07395 Mig-14 35 295 7.0E-109 T 06-07-2017 IPR009977 Mig-14 LFZ55_RS05520 4ef1e48c1ebd37139924aa9ae8501224 298 PIRSF PIRSF029703 1 296 1.4E-135 T 06-07-2017 IPR009977 Mig-14 LFZ55_RS05520 4ef1e48c1ebd37139924aa9ae8501224 298 SUPERFAMILY SSF55729 133 261 1.17E-10 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Gene3D G3DSA:1.10.150.20 413 477 1.2E-5 T 06-07-2017 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 116 291 1.6E-24 T 06-07-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Gene3D G3DSA:1.10.287.610 30 68 5.3E-5 T 06-07-2017 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 SMART SM00532 29 426 5.6E-94 T 06-07-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Gene3D G3DSA:2.40.50.140 311 382 5.0E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 SUPERFAMILY SSF56091 25 307 5.61E-68 T 06-07-2017 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 SUPERFAMILY SSF47781 401 556 6.97E-20 T 06-07-2017 IPR010994 RuvA domain 2-like LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Hamap MF_01587 DNA ligase B [ligB]. 3 559 51.122 T 06-07-2017 IPR020923 DNA ligase B GO:0003911|GO:0006259 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 389 7.1E-18 T 06-07-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 06-07-2017 IPR018239 NAD-dependent DNA ligase, active site LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 Gene3D G3DSA:3.30.470.30 129 245 1.7E-22 T 06-07-2017 LFZ55_RS00540 daee81b458b7e11a84eb7f16ef6eb525 561 SUPERFAMILY SSF50249 311 390 1.59E-16 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS08485 092301d954b0ab9ab2b6cd3d7a209eb8 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.6E-24 T 06-07-2017 IPR009921 Domain of unknown function DUF1456 LFZ55_RS08485 092301d954b0ab9ab2b6cd3d7a209eb8 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 149 2.2E-19 T 06-07-2017 IPR009921 Domain of unknown function DUF1456 LFZ55_RS23310 7337753d1e00074287c756aba392a27e 306 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 06-07-2017 IPR033140 Lipase, GDXG, putative serine active site LFZ55_RS23310 7337753d1e00074287c756aba392a27e 306 SUPERFAMILY SSF53474 24 278 1.65E-56 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS23310 7337753d1e00074287c756aba392a27e 306 Pfam PF07859 alpha/beta hydrolase fold 75 271 3.0E-59 T 06-07-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LFZ55_RS23310 7337753d1e00074287c756aba392a27e 306 Gene3D G3DSA:3.40.50.1820 7 272 1.6E-73 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS14840 0731f167bb1c55197887cf61fca788ab 230 SUPERFAMILY SSF56935 51 230 3.05E-14 T 06-07-2017 LFZ55_RS14840 0731f167bb1c55197887cf61fca788ab 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 16 230 9.9E-95 T 06-07-2017 IPR009331 Oligogalacturonate-specific porin LFZ55_RS14840 0731f167bb1c55197887cf61fca788ab 230 Gene3D G3DSA:2.40.230.30 24 230 3.8E-72 T 06-07-2017 LFZ55_RS21545 308e79c1831415003add986606ceeafa 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 6.6E-81 T 06-07-2017 IPR019903 Repair of iron centres family LFZ55_RS21545 308e79c1831415003add986606ceeafa 220 Gene3D G3DSA:1.20.120.520 78 217 4.8E-27 T 06-07-2017 LFZ55_RS21545 308e79c1831415003add986606ceeafa 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 6.8E-19 T 06-07-2017 IPR019903 Repair of iron centres family LFZ55_RS21545 308e79c1831415003add986606ceeafa 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 4.0E-27 T 06-07-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 LFZ55_RS21545 308e79c1831415003add986606ceeafa 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 51.287 T 06-07-2017 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.3E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 6.5E-4 T 06-07-2017 LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 SUPERFAMILY SSF51735 6 255 1.97E-87 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 4.4E-72 T 06-07-2017 LFZ55_RS07015 0a2fe2a5067bbf2995f93239042bd7ba 263 Gene3D G3DSA:3.40.50.720 1 254 1.1E-91 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11275 a64747fb290a8e10ccbe74140b7e7dc0 59 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 59 26.026 T 06-07-2017 IPR020887 Uncharacterised protein family UPF0509 LFZ55_RS13025 062fc506aae9cbbe99911c4ae0a8eea5 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 5.7E-19 T 06-07-2017 IPR010710 Protein of unknown function DUF1289 LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 Gene3D G3DSA:3.90.226.10 270 303 1.9E-34 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 Gene3D G3DSA:3.90.226.10 97 204 1.9E-34 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.2E-60 T 06-07-2017 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 SUPERFAMILY SSF52096 239 298 9.84E-32 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 SUPERFAMILY SSF52096 95 208 9.84E-32 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS11190 9483821d35f39c7c2ca5a6cb60611c43 348 Pfam PF01343 Peptidase family S49 160 309 2.3E-48 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LFZ55_RS12555 6b1a0a0a1eb79276e18adad81bed7ad3 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.576 T 06-07-2017 IPR023495 Sugar efflux transporter, putative LFZ55_RS12555 6b1a0a0a1eb79276e18adad81bed7ad3 396 Gene3D G3DSA:1.20.1250.20 8 196 4.0E-29 T 06-07-2017 LFZ55_RS12555 6b1a0a0a1eb79276e18adad81bed7ad3 396 SUPERFAMILY SSF103473 5 386 5.89E-57 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12555 6b1a0a0a1eb79276e18adad81bed7ad3 396 Gene3D G3DSA:1.20.1250.20 207 386 3.9E-14 T 06-07-2017 LFZ55_RS12555 6b1a0a0a1eb79276e18adad81bed7ad3 396 Pfam PF07690 Major Facilitator Superfamily 18 320 2.1E-34 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS18490 3c1566917936ab723002b1cdbeb3b69f 63 Pfam PF16362 YaiA protein 1 63 1.2E-38 T 06-07-2017 IPR032303 YaiA protein LFZ55_RS01850 14226225407a04f1ba0f016e893a26c8 695 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 674 5.1E-248 T 06-07-2017 IPR010020 Integral membrane protein, YccS/YhfK LFZ55_RS01850 14226225407a04f1ba0f016e893a26c8 695 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 3.1E-74 T 06-07-2017 IPR032692 Integral membrane protein YccS, N-terminal LFZ55_RS01850 14226225407a04f1ba0f016e893a26c8 695 Pfam PF13515 Fusaric acid resistance protein-like 377 498 6.6E-21 T 06-07-2017 LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 Gene3D G3DSA:1.10.3470.10 342 659 2.6E-81 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 Pfam PF01032 FecCD transport family 13 323 1.8E-62 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 Pfam PF01032 FecCD transport family 380 657 1.4E-71 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 SUPERFAMILY SSF81345 10 325 7.19E-58 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 Gene3D G3DSA:1.10.3470.10 7 327 2.7E-72 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS19395 3ccff77232e2b688152244a2034f970d 660 SUPERFAMILY SSF81345 345 657 4.05E-71 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS00955 c2a83ad6e1ef8effad1c8b7011bc2ddb 96 Gene3D G3DSA:1.10.260.40 40 88 3.3E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS00955 c2a83ad6e1ef8effad1c8b7011bc2ddb 96 SUPERFAMILY SSF47413 39 82 1.53E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS02840 d1a7e7c9b4c2e7ba24ac7b4e434e3e58 331 Pfam PF01136 Peptidase family U32 76 330 3.6E-67 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS02840 d1a7e7c9b4c2e7ba24ac7b4e434e3e58 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS02840 d1a7e7c9b4c2e7ba24ac7b4e434e3e58 331 SUPERFAMILY SSF51391 11 162 1.15E-5 T 06-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS22430 1c4128e952ac5c23761a8f0b406ef17f 118 SUPERFAMILY SSF142906 1 115 5.62E-35 T 06-07-2017 LFZ55_RS22430 1c4128e952ac5c23761a8f0b406ef17f 118 Pfam PF04237 YjbR 12 101 2.8E-18 T 06-07-2017 IPR007351 Uncharacterised protein YjbR LFZ55_RS08690 36744c58663b50480a84dc0953d3d3d0 280 Pfam PF00535 Glycosyl transferase family 2 9 160 5.9E-27 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS08690 36744c58663b50480a84dc0953d3d3d0 280 SUPERFAMILY SSF53448 6 234 1.69E-41 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08690 36744c58663b50480a84dc0953d3d3d0 280 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 2 280 1.1E-193 T 06-07-2017 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA LFZ55_RS08690 36744c58663b50480a84dc0953d3d3d0 280 Gene3D G3DSA:3.90.550.10 6 242 1.1E-40 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS14640 5cda90a2a5019a15c7a7c14bd7df1fe7 365 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 24 308 3.4E-63 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS14640 5cda90a2a5019a15c7a7c14bd7df1fe7 365 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 24 324 3.3E-68 T 06-07-2017 IPR010732 Type VI secretion, TssG-like LFZ55_RS10750 1cc4360c57ac0803c5bd59abba8b2e1d 144 Pfam PF13699 Domain of unknown function (DUF4157) 45 110 1.5E-12 T 06-07-2017 IPR025295 Domain of unknown function DUF4157 LFZ55_RS22090 65105595766b2a985a29f72c69556d9b 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 9.1E-202 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS22090 65105595766b2a985a29f72c69556d9b 446 PIRSF PIRSF004539 1 444 1.2E-195 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS22090 65105595766b2a985a29f72c69556d9b 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 1.0E-148 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 Gene3D G3DSA:3.40.50.720 2 253 1.7E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 SUPERFAMILY SSF51735 6 253 1.19E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 6.1E-85 T 06-07-2017 LFZ55_RS11295 be8c46e090a2cfc5ed81bfc3b1890b5b 262 PIRSF PIRSF000094 1 260 1.3E-124 T 06-07-2017 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 341 6.9E-103 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 4 341 3.2E-107 T 06-07-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 1.1E-35 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 1.1E-35 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 1.1E-35 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 1.1E-35 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 1.1E-35 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 SUPERFAMILY SSF160544 239 341 9.55E-30 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS18830 80fbb2dc042ddecba7e6ed7ca693c88b 345 Gene3D G3DSA:3.40.1690.10 212 341 9.4E-46 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 67.282 T 06-07-2017 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 1.6E-78 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 Gene3D G3DSA:1.10.12.10 200 261 6.4E-21 T 06-07-2017 IPR014748 Crontonase, C-terminal LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 SUPERFAMILY SSF52096 2 261 2.2E-78 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS20030 63ae6bab6bed7523945d4345268930f8 261 Gene3D G3DSA:3.90.226.10 2 196 1.6E-64 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS17760 9c3f4ed2c7afab63455e158d396c212a 309 Gene3D G3DSA:2.40.160.40 30 309 1.5E-45 T 06-07-2017 LFZ55_RS11755 ee3f442ca183e307c2c49e01d41df334 408 SUPERFAMILY SSF52266 143 404 5.66E-18 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS11755 ee3f442ca183e307c2c49e01d41df334 408 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 394 2.0E-10 T 06-07-2017 IPR001087 GDSL lipase/esterase GO:0016788 LFZ55_RS11755 ee3f442ca183e307c2c49e01d41df334 408 Pfam PF06767 Sif protein 1 101 9.8E-9 T 06-07-2017 IPR010637 Sif LFZ55_RS11755 ee3f442ca183e307c2c49e01d41df334 408 Gene3D G3DSA:3.40.50.1110 141 401 3.2E-39 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain LFZ55_RS23570 8afa9cf1237cf71d1c8913f7c5c78802 182 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 19.244 T 06-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LFZ55_RS23570 8afa9cf1237cf71d1c8913f7c5c78802 182 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.6E-33 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LFZ55_RS23570 8afa9cf1237cf71d1c8913f7c5c78802 182 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.6E-33 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LFZ55_RS23570 8afa9cf1237cf71d1c8913f7c5c78802 182 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.6E-33 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LFZ55_RS23570 8afa9cf1237cf71d1c8913f7c5c78802 182 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.3E-32 T 06-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 163 3.7E-10 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 SUPERFAMILY SSF51161 4 182 2.5E-51 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 SMART SM01266 5 59 3.4E-20 T 06-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 Pfam PF12464 Maltose acetyltransferase 7 55 6.1E-16 T 06-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 Gene3D G3DSA:2.160.10.10 3 183 8.5E-60 T 06-07-2017 LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0038 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS18100 3d0386d71bc7d6cd5cf1f25aaf79eb5c 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 Pfam PF00455 DeoR C terminal sensor domain 79 236 1.2E-45 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 Pfam PF08220 DeoR-like helix-turn-helix domain 8 65 5.4E-20 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 SMART SM01134 77 237 2.6E-58 T 06-07-2017 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 SMART SM00420 8 61 3.1E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 SUPERFAMILY SSF100950 78 238 5.96E-26 T 06-07-2017 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LFZ55_RS11880 401119fddce6d43a2245249ac81e239a 263 Gene3D G3DSA:3.40.50.1360 79 216 1.2E-8 T 06-07-2017 LFZ55_RS09615 d3436eebfcc7ba27d9ccc730561b4b79 122 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 119 25.687 T 06-07-2017 IPR008622 Flagellar protein FliT LFZ55_RS09615 d3436eebfcc7ba27d9ccc730561b4b79 122 Gene3D G3DSA:1.20.58.380 7 93 3.2E-16 T 06-07-2017 LFZ55_RS09615 d3436eebfcc7ba27d9ccc730561b4b79 122 Pfam PF05400 Flagellar protein FliT 21 106 3.1E-18 T 06-07-2017 IPR008622 Flagellar protein FliT LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 Gene3D G3DSA:3.40.50.360 4 132 9.7E-58 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 PIRSF PIRSF005087 1 136 4.2E-54 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 SUPERFAMILY SSF52218 2 131 1.19E-22 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 Pfam PF07972 NrdI Flavodoxin like 5 122 5.4E-47 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 130 5.1E-58 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI LFZ55_RS05385 f41d1eee811c2104d21c7a8ce396a7e8 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.442 T 06-07-2017 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial LFZ55_RS11025 ab1f425c9f28e496ff6e463c22fc3839 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 5.7E-83 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LFZ55_RS11025 ab1f425c9f28e496ff6e463c22fc3839 215 Pfam PF01914 MarC family integral membrane protein 9 210 6.5E-75 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LFZ55_RS20475 ff438ca5953c31894e0ee39385fa8f0f 59 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 7 58 18.804 T 06-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 LFZ55_RS20475 ff438ca5953c31894e0ee39385fa8f0f 59 PIRSF PIRSF036466 7 59 1.1E-20 T 06-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 LFZ55_RS20475 ff438ca5953c31894e0ee39385fa8f0f 59 Pfam PF07043 Protein of unknown function (DUF1328) 12 50 1.3E-13 T 06-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 LFZ55_RS18545 cbd19cb39e11a22c3f6dae03d314e6ae 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 6.1E-51 T 06-07-2017 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 LFZ55_RS18545 cbd19cb39e11a22c3f6dae03d314e6ae 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 6.0E-54 T 06-07-2017 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 LFZ55_RS09015 3454d088551ee3062ec88b50c39b2e95 147 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 66 2.0E-23 T 06-07-2017 LFZ55_RS09015 3454d088551ee3062ec88b50c39b2e95 147 SUPERFAMILY SSF143414 3 91 5.23E-23 T 06-07-2017 LFZ55_RS09015 3454d088551ee3062ec88b50c39b2e95 147 SMART SM00877 3 80 6.0E-25 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS09015 3454d088551ee3062ec88b50c39b2e95 147 Pfam PF00936 BMC domain 4 80 2.1E-20 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS24605 647e069fa8cfc41aa3e15d4a2705a15a 161 Pfam PF01464 Transglycosylase SLT domain 32 149 5.4E-27 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 LFZ55_RS24605 647e069fa8cfc41aa3e15d4a2705a15a 161 SUPERFAMILY SSF53955 30 157 1.1E-33 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS24605 647e069fa8cfc41aa3e15d4a2705a15a 161 Gene3D G3DSA:1.10.530.10 23 156 2.6E-21 T 06-07-2017 LFZ55_RS06130 c51c44725567cda71cbdc31fb2fc14cc 328 Pfam PF03824 High-affinity nickel-transport protein 188 312 1.2E-18 T 06-07-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LFZ55_RS06130 c51c44725567cda71cbdc31fb2fc14cc 328 Pfam PF03824 High-affinity nickel-transport protein 73 179 3.7E-23 T 06-07-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LFZ55_RS17475 c10bd8207f9245ab0803ef548f75b5f0 298 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 23 291 1.5E-84 T 06-07-2017 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS17475 c10bd8207f9245ab0803ef548f75b5f0 298 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 23 292 8.2E-108 T 06-07-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS17475 c10bd8207f9245ab0803ef548f75b5f0 298 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 2 298 182.003 T 06-07-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 LFZ55_RS24290 cd3669e91e9693367cd90cd791507476 643 Gene3D G3DSA:3.90.1530.10 49 131 2.2E-4 T 06-07-2017 LFZ55_RS24290 cd3669e91e9693367cd90cd791507476 643 SUPERFAMILY SSF109709 119 213 1.15E-18 T 06-07-2017 LFZ55_RS24290 cd3669e91e9693367cd90cd791507476 643 Pfam PF02195 ParB-like nuclease domain 31 125 2.8E-4 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS08445 bc34d5ff8440478102ac9b825a7277e1 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 7.5E-60 T 06-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LFZ55_RS08445 bc34d5ff8440478102ac9b825a7277e1 305 Gene3D G3DSA:3.40.190.120 134 241 2.2E-27 T 06-07-2017 LFZ55_RS08445 bc34d5ff8440478102ac9b825a7277e1 305 Gene3D G3DSA:3.40.190.10 24 133 2.4E-57 T 06-07-2017 LFZ55_RS08445 bc34d5ff8440478102ac9b825a7277e1 305 Gene3D G3DSA:3.40.190.10 254 304 2.4E-57 T 06-07-2017 LFZ55_RS08445 bc34d5ff8440478102ac9b825a7277e1 305 SUPERFAMILY SSF53850 26 303 1.63E-59 T 06-07-2017 LFZ55_RS08160 97f0ce546e86e25bb227b088801cad11 190 Pfam PF00877 NlpC/P60 family 81 185 1.1E-33 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS08160 97f0ce546e86e25bb227b088801cad11 190 SUPERFAMILY SSF54001 69 187 5.89E-41 T 06-07-2017 LFZ55_RS08160 97f0ce546e86e25bb227b088801cad11 190 Gene3D G3DSA:3.90.1720.10 70 188 3.6E-45 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS22625 2610181a2c9d6723ddcb7c801aca91c7 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 50.807 T 06-07-2017 IPR023172 Peptidase S51, dipeptidase E GO:0016805 LFZ55_RS22625 2610181a2c9d6723ddcb7c801aca91c7 229 Gene3D G3DSA:3.40.50.880 1 227 4.2E-78 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS22625 2610181a2c9d6723ddcb7c801aca91c7 229 Pfam PF03575 Peptidase family S51 3 204 4.2E-61 T 06-07-2017 IPR005320 Peptidase S51 GO:0006508|GO:0008236 LFZ55_RS22625 2610181a2c9d6723ddcb7c801aca91c7 229 SUPERFAMILY SSF52317 1 221 8.5E-44 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS23010 39cc1fd75ef1495b7f9b394481fd9d5d 130 Gene3D G3DSA:3.90.780.10 2 125 3.9E-30 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS23010 39cc1fd75ef1495b7f9b394481fd9d5d 130 SUPERFAMILY SSF55816 2 124 6.54E-31 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS23010 39cc1fd75ef1495b7f9b394481fd9d5d 130 Pfam PF02872 5'-nucleotidase, C-terminal domain 2 88 3.2E-24 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LFZ55_RS21360 553f8efd1b9befa92d59f4bd4a2bab0b 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 242 2.6E-122 T 06-07-2017 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS21360 553f8efd1b9befa92d59f4bd4a2bab0b 246 SUPERFAMILY SSF51569 72 205 2.93E-8 T 06-07-2017 LFZ55_RS21360 553f8efd1b9befa92d59f4bd4a2bab0b 246 Pfam PF07071 Protein of unknown function (DUF1341) 8 224 5.6E-113 T 06-07-2017 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LFZ55_RS21980 90e9b7ab442930d6b3a583fed592ecd0 810 Pfam PF13954 PapC N-terminal domain 38 173 3.2E-19 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS21980 90e9b7ab442930d6b3a583fed592ecd0 810 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 294 304 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site LFZ55_RS21980 90e9b7ab442930d6b3a583fed592ecd0 810 Pfam PF00577 Outer membrane usher protein 188 731 7.7E-90 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS21980 90e9b7ab442930d6b3a583fed592ecd0 810 SUPERFAMILY SSF141729 38 150 1.83E-16 T 06-07-2017 LFZ55_RS24665 4e585716d3017584aa475df4e032ec6c 277 Pfam PF06977 SdiA-regulated 30 275 1.9E-73 T 06-07-2017 IPR009722 SdiA-regulated LFZ55_RS24665 4e585716d3017584aa475df4e032ec6c 277 SUPERFAMILY SSF50956 36 277 9.81E-25 T 06-07-2017 LFZ55_RS24665 4e585716d3017584aa475df4e032ec6c 277 Gene3D G3DSA:2.130.10.10 41 91 3.0E-5 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS24665 4e585716d3017584aa475df4e032ec6c 277 Gene3D G3DSA:2.130.10.10 199 265 3.0E-5 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LFZ55_RS10265 c54474c4c60bc5c3de1e46262dbe5697 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 2 79 7.0E-41 T 06-07-2017 IPR009950 Protein of unknown function DUF1480 LFZ55_RS10265 c54474c4c60bc5c3de1e46262dbe5697 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 6.0E-38 T 06-07-2017 IPR009950 Protein of unknown function DUF1480 LFZ55_RS15350 61f56699cee2b371f148d5cd218874d6 115 Pfam PF05717 IS66 Orf2 like protein 9 106 2.2E-39 T 06-07-2017 IPR008878 Transposase IS66, Orf2 LFZ55_RS02025 9cb5a8b9f0b3c0f5e636ac2ad8bd7037 155 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 75 85 7.7E-17 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial LFZ55_RS02025 9cb5a8b9f0b3c0f5e636ac2ad8bd7037 155 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 18 35 7.7E-17 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial LFZ55_RS02025 9cb5a8b9f0b3c0f5e636ac2ad8bd7037 155 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 97 7.7E-17 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial LFZ55_RS02025 9cb5a8b9f0b3c0f5e636ac2ad8bd7037 155 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 113 7.7E-17 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial LFZ55_RS02025 9cb5a8b9f0b3c0f5e636ac2ad8bd7037 155 Pfam PF01478 Type IV leader peptidase family 10 113 5.7E-22 T 06-07-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 LFZ55_RS06740 545a1c443959f48148f8c3ccd55cdb9e 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LFZ55_RS06740 545a1c443959f48148f8c3ccd55cdb9e 429 Pfam PF00860 Permease family 16 382 6.7E-106 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS06740 545a1c443959f48148f8c3ccd55cdb9e 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 9.3E-130 T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LFZ55_RS01385 896259eb6354234c30e5f36fe44d4795 208 Pfam PF07947 YhhN-like protein 26 206 7.2E-42 T 06-07-2017 IPR012506 YhhN-like GO:0016021 LFZ55_RS05590 69318c962490196adcaf52944e7351a5 179 ProDom PD016683 REPRESSOR TRANSCRIPTION FLIC PLASMID PHASE FLAGELLIN TRANSCRIPTIONAL DNA-BINDING GENE FLAGELLUM 7 179 6.0E-93 T 06-07-2017 IPR003223 Flagellin phase1 repressor GO:0003700|GO:0006355 LFZ55_RS05590 69318c962490196adcaf52944e7351a5 179 Pfam PF03614 Repressor of phase-1 flagellin 8 172 8.8E-85 T 06-07-2017 IPR003223 Flagellin phase1 repressor GO:0003700|GO:0006355 LFZ55_RS22520 de740532ed96f4d2ace41c07238f1cb7 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 2.2E-111 T 06-07-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 LFZ55_RS22520 de740532ed96f4d2ace41c07238f1cb7 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.4 T 06-07-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 LFZ55_RS22520 de740532ed96f4d2ace41c07238f1cb7 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 06-07-2017 IPR030470 UbiA prenyltransferase conserved site LFZ55_RS22520 de740532ed96f4d2ace41c07238f1cb7 290 Pfam PF01040 UbiA prenyltransferase family 28 271 9.4E-68 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 Pfam PF05494 MlaC protein 33 198 5.8E-54 T 06-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 Gene3D G3DSA:3.10.450.50 26 70 4.3E-18 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 Gene3D G3DSA:3.10.450.50 114 172 4.3E-18 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 PIRSF PIRSF004649 1 211 1.2E-63 T 06-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 Gene3D G3DSA:1.10.10.640 173 203 1.6E-22 T 06-07-2017 IPR023094 Toluene tolerance protein, alpha-helical LFZ55_RS02670 44546a7572c51212e820b0aa156f47eb 211 Gene3D G3DSA:1.10.10.640 71 111 1.6E-22 T 06-07-2017 IPR023094 Toluene tolerance protein, alpha-helical LFZ55_RS08865 9e77a336b2e6a9899eed7caecc478b97 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.527 T 06-07-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 LFZ55_RS08865 9e77a336b2e6a9899eed7caecc478b97 245 Gene3D G3DSA:3.20.20.70 1 243 1.6E-78 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS08865 9e77a336b2e6a9899eed7caecc478b97 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.4E-76 T 06-07-2017 IPR006062 Histidine biosynthesis GO:0000105 LFZ55_RS08865 9e77a336b2e6a9899eed7caecc478b97 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 6.4E-79 T 06-07-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 LFZ55_RS08865 9e77a336b2e6a9899eed7caecc478b97 245 SUPERFAMILY SSF51366 1 244 4.58E-66 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 SUPERFAMILY SSF56655 2 325 2.99E-112 T 06-07-2017 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 5.9E-132 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 PIRSF PIRSF004532 1 333 6.8E-141 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 334 2.2E-183 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 Gene3D G3DSA:3.30.540.10 172 329 6.4E-48 T 06-07-2017 LFZ55_RS23100 8b434d63b8151a5d96ac0a7ae51cd23f 336 Gene3D G3DSA:3.30.540.10 1 171 1.2E-70 T 06-07-2017 LFZ55_RS18795 d58e774a836e60ed560a745ee496eef2 193 Gene3D G3DSA:2.60.40.1090 32 193 1.4E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18795 d58e774a836e60ed560a745ee496eef2 193 Pfam PF00419 Fimbrial protein 66 192 3.7E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18795 d58e774a836e60ed560a745ee496eef2 193 SUPERFAMILY SSF49401 31 193 2.81E-16 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS15195 644a2705a9f097eaa028940d81023f68 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 62 1.1E-16 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 7 95 3.3E-26 T 06-07-2017 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 SUPERFAMILY SSF47345 6 96 1.44E-27 T 06-07-2017 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 Gene3D G3DSA:1.10.1200.20 6 96 1.2E-30 T 06-07-2017 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 13 95 3.0E-23 T 06-07-2017 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 7 25 1.4E-8 T 06-07-2017 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 LFZ55_RS12310 53fccd4416aaaa9b879ab98b046759d1 97 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 74 95 1.4E-8 T 06-07-2017 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 LFZ55_RS03015 99fce73aec782dbae5ac201413f2962e 454 Pfam PF03315 Serine dehydratase beta chain 3 155 3.2E-55 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS03015 99fce73aec782dbae5ac201413f2962e 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.3E-220 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS03015 99fce73aec782dbae5ac201413f2962e 454 SUPERFAMILY SSF143548 16 158 3.92E-44 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS03015 99fce73aec782dbae5ac201413f2962e 454 Gene3D G3DSA:3.30.1330.90 10 158 1.0E-52 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS03015 99fce73aec782dbae5ac201413f2962e 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.5E-98 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SMART SM00487 23 307 1.4E-4 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Pfam PF13307 Helicase C-terminal domain 531 688 3.4E-24 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Gene3D G3DSA:3.40.50.300 27 121 6.0E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Gene3D G3DSA:3.40.50.300 210 277 6.0E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SMART SM00488 18 294 0.0061 T 06-07-2017 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SMART SM00491 544 676 7.6E-35 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Gene3D G3DSA:3.40.50.300 521 671 1.7E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SUPERFAMILY SSF52540 199 270 5.57E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SUPERFAMILY SSF52540 46 97 5.57E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SUPERFAMILY SSF52540 451 465 5.57E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 SUPERFAMILY SSF52540 500 670 5.57E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Pfam PF06733 DEAD_2 198 264 4.9E-7 T 06-07-2017 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 LFZ55_RS16515 9432b0e24a5b76e39fe3a1fc980be47d 714 Pfam PF00270 DEAD/DEAH box helicase 31 93 3.2E-5 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LFZ55_RS09965 4de5dd3baccfaf2bb32c6264543252bd 251 Pfam PF00005 ABC transporter 20 149 5.1E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS09965 4de5dd3baccfaf2bb32c6264543252bd 251 SUPERFAMILY SSF52540 4 216 5.42E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09965 4de5dd3baccfaf2bb32c6264543252bd 251 Gene3D G3DSA:3.40.50.300 3 208 1.1E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS09965 4de5dd3baccfaf2bb32c6264543252bd 251 SMART SM00382 29 199 1.8E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS18055 7e3f02e91c4111a0f0ae50d74aa4eea8 55 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.7E-23 T 06-07-2017 IPR019630 Protein of unknown function DUF2496, YbaM-related LFZ55_RS12365 873334084942a7dfbc9eaf03c863693d 229 Pfam PF09850 Type VI secretion system protein DotU 7 215 2.8E-43 T 06-07-2017 IPR017732 Type IV / VI secretion system, DotU LFZ55_RS12365 873334084942a7dfbc9eaf03c863693d 229 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 7 218 2.0E-41 T 06-07-2017 IPR017732 Type IV / VI secretion system, DotU LFZ55_RS00430 91df3eecfc90f1a1cb65521135ec9434 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 1 106 2.0E-45 T 06-07-2017 LFZ55_RS00190 d0d0e5611209502e41c53dabe5e20220 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 2.3E-16 T 06-07-2017 IPR003807 Domain of unknown function DUF202 LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 Pfam PF00072 Response regulator receiver domain 4 117 3.4E-19 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 SMART SM00448 2 117 1.8E-20 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 Gene3D G3DSA:3.40.50.2300 1 130 6.1E-26 T 06-07-2017 LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 Gene3D G3DSA:1.10.10.60 159 192 3.6E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 SUPERFAMILY SSF52172 1 142 2.42E-29 T 06-07-2017 IPR011006 CheY-like superfamily LFZ55_RS22080 9996ec7f67e45ebb3698aa14cacddf1f 239 PIRSF PIRSF006171 1 230 1.1E-81 T 06-07-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 69 96 - T 06-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 Gene3D G3DSA:1.20.1250.20 240 443 1.1E-14 T 06-07-2017 LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 Gene3D G3DSA:1.20.1250.20 29 209 1.6E-5 T 06-07-2017 LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 Pfam PF13347 MFS/sugar transport protein 20 443 4.2E-83 T 06-07-2017 LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 SUPERFAMILY SSF103473 20 444 1.44E-30 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS23385 cfbcd54d2c7353f4c336694465201691 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 456 1.5E-157 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 79 194 7.0E-22 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 195 1.2E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 Gene3D G3DSA:1.10.150.240 15 90 4.1E-18 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 1.1E-72 T 06-07-2017 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 SUPERFAMILY SSF56784 3 222 3.77E-47 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 Gene3D G3DSA:3.40.50.1000 91 223 6.7E-44 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.0E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.0E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.0E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS20490 1f8bd9af2a49651951f9988275678502 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 189 4.4E-17 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 Gene3D G3DSA:3.40.430.10 1 159 4.9E-59 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 SUPERFAMILY SSF53597 1 159 4.45E-55 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 9.8E-15 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 9.8E-15 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 9.8E-15 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 9.8E-15 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 PIRSF PIRSF000194 1 159 5.4E-57 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 06-07-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 LFZ55_RS19960 717cd5c2be4c9e5b519577e721be5602 159 Pfam PF00186 Dihydrofolate reductase 1 158 2.1E-58 T 06-07-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LFZ55_RS18105 5aeba6ea6cb76f7283ab9f284824b0e6 156 Pfam PF10777 Inner membrane protein YlaC 1 152 5.9E-66 T 06-07-2017 IPR019713 Inner membrane protein YlaC LFZ55_RS17560 afbba06f6eafa8cc8696aff6127ba057 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 1.9E-30 T 06-07-2017 IPR007423 Protein of unknown function DUF466 LFZ55_RS13350 e9f62953399ad8ba3c47ded8202415e2 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 8.3E-42 T 06-07-2017 IPR003808 Fe-S metabolism associated domain, SufE-like LFZ55_RS13350 e9f62953399ad8ba3c47ded8202415e2 138 SUPERFAMILY SSF82649 3 135 7.32E-43 T 06-07-2017 LFZ55_RS13350 e9f62953399ad8ba3c47ded8202415e2 138 Gene3D G3DSA:3.90.1010.10 2 136 3.6E-50 T 06-07-2017 LFZ55_RS13350 e9f62953399ad8ba3c47ded8202415e2 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.381 T 06-07-2017 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 LFZ55_RS00560 808ddb01720ddba1d9f8d912dd19f2b0 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.1E-137 T 06-07-2017 IPR005229 Conserved hypothetical protein CHP00255 LFZ55_RS00560 808ddb01720ddba1d9f8d912dd19f2b0 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.0E-43 T 06-07-2017 IPR013527 YicC-like, N-terminal LFZ55_RS00560 808ddb01720ddba1d9f8d912dd19f2b0 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.2E-34 T 06-07-2017 IPR013551 Domain of unknown function DUF1732 LFZ55_RS23170 1c6b0142c2de5b42bb11b7856cc6fe1c 223 Pfam PF03473 MOSC domain 47 157 6.3E-21 T 06-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 LFZ55_RS23170 1c6b0142c2de5b42bb11b7856cc6fe1c 223 SUPERFAMILY SSF50800 2 223 1.05E-74 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain LFZ55_RS23170 1c6b0142c2de5b42bb11b7856cc6fe1c 223 Pfam PF03475 3-alpha domain 169 211 3.6E-15 T 06-07-2017 IPR005163 3-alpha domain LFZ55_RS23170 1c6b0142c2de5b42bb11b7856cc6fe1c 223 Gene3D G3DSA:2.40.33.20 4 223 2.9E-86 T 06-07-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like LFZ55_RS11615 b26f341225937284305642fb0f15288d 311 SUPERFAMILY SSF52402 17 235 6.39E-54 T 06-07-2017 LFZ55_RS11615 b26f341225937284305642fb0f15288d 311 PIRSF PIRSF004976 2 271 2.6E-77 T 06-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 LFZ55_RS11615 b26f341225937284305642fb0f15288d 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 58.02 T 06-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 LFZ55_RS11615 b26f341225937284305642fb0f15288d 311 Pfam PF01171 PP-loop family 42 204 2.9E-13 T 06-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 LFZ55_RS11615 b26f341225937284305642fb0f15288d 311 Gene3D G3DSA:3.40.50.620 23 206 3.3E-21 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS12590 45789948bb2d874f6908536520c14179 300 SUPERFAMILY SSF103481 211 288 8.76E-11 T 06-07-2017 LFZ55_RS12590 45789948bb2d874f6908536520c14179 300 SUPERFAMILY SSF103481 41 133 1.31E-11 T 06-07-2017 LFZ55_RS12590 45789948bb2d874f6908536520c14179 300 Pfam PF00892 EamA-like transporter family 144 287 6.6E-16 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS12590 45789948bb2d874f6908536520c14179 300 Pfam PF00892 EamA-like transporter family 8 131 9.8E-15 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS11245 322e84e6189a309e794833d72de5bf05 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.779 T 06-07-2017 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 LFZ55_RS11245 322e84e6189a309e794833d72de5bf05 102 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 4.2E-21 T 06-07-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.7E-21 T 06-07-2017 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 SMART SM00344 12 121 2.1E-55 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:3.30.70.920 65 161 2.0E-33 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 06-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LFZ55_RS15840 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:1.10.10.10 13 64 1.0E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24150 d0330264e6d30d49f46b6345a1f37a0f 251 Gene3D G3DSA:3.90.470.20 33 108 1.2E-7 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LFZ55_RS09760 68ddc009a6320703bdf30d0467023b9a 212 SUPERFAMILY SSF89623 1 161 2.35E-36 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LFZ55_RS09760 68ddc009a6320703bdf30d0467023b9a 212 Pfam PF02502 Ribose/Galactose Isomerase 3 138 7.9E-29 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LFZ55_RS09760 68ddc009a6320703bdf30d0467023b9a 212 Gene3D G3DSA:3.40.1400.10 1 211 2.6E-94 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LFZ55_RS09760 68ddc009a6320703bdf30d0467023b9a 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 5.0E-21 T 06-07-2017 IPR022133 Ribose-5-phosphate isomerase, C-terminal LFZ55_RS12585 06114984f9e66217d8af3b7c5949be0b 1366 SUPERFAMILY SSF103515 1052 1360 6.28E-28 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS12585 06114984f9e66217d8af3b7c5949be0b 1366 SMART SM00869 1082 1356 4.4E-29 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS12585 06114984f9e66217d8af3b7c5949be0b 1366 Gene3D G3DSA:2.40.128.130 1075 1366 4.7E-26 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS12585 06114984f9e66217d8af3b7c5949be0b 1366 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1028 1360 4.3E-20 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 LFZ55_RS07055 387c1c5dbae207f43ab5111815f045fb 288 Gene3D G3DSA:3.40.1190.20 22 280 7.3E-67 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS07055 387c1c5dbae207f43ab5111815f045fb 288 SUPERFAMILY SSF53613 23 279 2.03E-58 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS07055 387c1c5dbae207f43ab5111815f045fb 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 21 284 1.3E-49 T 06-07-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LFZ55_RS07055 387c1c5dbae207f43ab5111815f045fb 288 Pfam PF08543 Phosphomethylpyrimidine kinase 93 269 7.2E-23 T 06-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 LFZ55_RS07055 387c1c5dbae207f43ab5111815f045fb 288 Hamap MF_01638 Pyridoxine/pyridoxal/pyridoxamine kinase [pdxK]. 1 287 54.853 T 06-07-2017 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 LFZ55_RS05110 3bd8c7a87f3924256f02ea8bc51d65e7 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 6.4E-39 T 06-07-2017 IPR020483 Uncharacterised protein family YgbA LFZ55_RS05110 3bd8c7a87f3924256f02ea8bc51d65e7 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 5.0E-48 T 06-07-2017 IPR020483 Uncharacterised protein family YgbA LFZ55_RS22485 40925094f627c34dafd90408dfb847e4 171 Gene3D G3DSA:1.10.10.10 12 84 1.7E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22485 40925094f627c34dafd90408dfb847e4 171 SUPERFAMILY SSF46785 12 145 3.5E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22485 40925094f627c34dafd90408dfb847e4 171 Pfam PF01475 Ferric uptake regulator family 20 138 3.0E-15 T 06-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 Pfam PF01313 Bacterial export proteins, family 3 9 79 2.0E-24 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 41 56 7.0E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 20 41 7.0E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 56 78 7.0E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 PIRSF PIRSF004669 3 88 7.6E-25 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18840 01b85b28ec0acb2f7991a12bf39edd1e 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 8 86 7.6E-31 T 06-07-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 LFZ55_RS06915 2b60627bc0eabe1dedf2d0491955acb4 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 7.9E-13 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS06915 2b60627bc0eabe1dedf2d0491955acb4 267 PIRSF PIRSF012294 1 255 1.2E-111 T 06-07-2017 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LFZ55_RS06915 2b60627bc0eabe1dedf2d0491955acb4 267 SUPERFAMILY SSF89028 93 249 8.24E-13 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS06915 2b60627bc0eabe1dedf2d0491955acb4 267 Gene3D G3DSA:1.20.1200.10 95 247 6.0E-12 T 06-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LFZ55_RS18670 fb4ba86270978a83af7a087d75d86f58 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 180 1.5E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS18670 fb4ba86270978a83af7a087d75d86f58 213 Gene3D G3DSA:1.10.10.10 137 195 3.2E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS18670 fb4ba86270978a83af7a087d75d86f58 213 SUPERFAMILY SSF46894 118 195 4.42E-11 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS16540 831dab8a00432281f6f4ae482f939b4c 376 Pfam PF12698 ABC-2 family transporter protein 28 369 9.7E-40 T 06-07-2017 LFZ55_RS09900 12716299d5ab99c02bedbf3013e4e84b 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.126 T 06-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 LFZ55_RS09900 12716299d5ab99c02bedbf3013e4e84b 248 SUPERFAMILY SSF110395 3 242 8.76E-76 T 06-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 LFZ55_RS09900 12716299d5ab99c02bedbf3013e4e84b 248 Gene3D G3DSA:3.20.20.380 1 243 1.4E-92 T 06-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 LFZ55_RS09900 12716299d5ab99c02bedbf3013e4e84b 248 Pfam PF03932 CutC family 3 199 2.5E-80 T 06-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 LFZ55_RS24650 9dfddf7e76c5c6111c758d92bcd4c75f 138 Pfam PF01850 PIN domain 5 129 8.7E-14 T 06-07-2017 IPR002716 PIN domain LFZ55_RS24650 9dfddf7e76c5c6111c758d92bcd4c75f 138 SUPERFAMILY SSF88723 3 136 1.09E-30 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS24650 9dfddf7e76c5c6111c758d92bcd4c75f 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 11.515 T 06-07-2017 IPR022907 VapC family GO:0004540 LFZ55_RS24650 9dfddf7e76c5c6111c758d92bcd4c75f 138 Gene3D G3DSA:3.40.50.1010 3 136 3.5E-27 T 06-07-2017 IPR029060 PIN domain-like LFZ55_RS07105 8c20a286555f6ce899c2dade021dc909 332 PIRSF PIRSF026166 1 332 2.3E-132 T 06-07-2017 IPR016833 Putative sodium bile acid cotransporter LFZ55_RS07105 8c20a286555f6ce899c2dade021dc909 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 3.0E-100 T 06-07-2017 IPR016833 Putative sodium bile acid cotransporter LFZ55_RS17405 beae2b6375277a5d4188520afcfbbc93 67 Pfam PF02416 mttA/Hcf106 family 4 48 5.3E-12 T 06-07-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LFZ55_RS17405 beae2b6375277a5d4188520afcfbbc93 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.1E-20 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LFZ55_RS17405 beae2b6375277a5d4188520afcfbbc93 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.425 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LFZ55_RS17405 beae2b6375277a5d4188520afcfbbc93 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 28.321 T 06-07-2017 IPR024905 Sec-independent protein translocase protein TatE LFZ55_RS10815 935c45186de7b4b9142d9f26cb8245c4 519 Pfam PF04984 Phage tail sheath protein 328 514 5.7E-25 T 06-07-2017 IPR007067 Tail sheath protein LFZ55_RS19340 aa30d01925123bfc00af42743bb49ebb 433 Pfam PF00083 Sugar (and other) transporter 52 428 5.5E-23 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS19340 aa30d01925123bfc00af42743bb49ebb 433 Gene3D G3DSA:1.20.1250.20 241 421 3.9E-14 T 06-07-2017 LFZ55_RS19340 aa30d01925123bfc00af42743bb49ebb 433 Gene3D G3DSA:1.20.1250.20 31 217 1.9E-20 T 06-07-2017 LFZ55_RS19340 aa30d01925123bfc00af42743bb49ebb 433 SUPERFAMILY SSF103473 10 426 1.44E-49 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS02655 eac828a18c6a20be2c41950e5d645810 270 SUPERFAMILY SSF52540 8 237 3.15E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02655 eac828a18c6a20be2c41950e5d645810 270 Pfam PF00005 ABC transporter 25 172 1.6E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS02655 eac828a18c6a20be2c41950e5d645810 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS02655 eac828a18c6a20be2c41950e5d645810 270 SMART SM00382 33 229 5.3E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS02655 eac828a18c6a20be2c41950e5d645810 270 Gene3D G3DSA:3.40.50.300 8 243 1.5E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 SUPERFAMILY SSF56059 204 378 4.77E-75 T 06-07-2017 LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 SUPERFAMILY SSF56059 496 613 4.77E-75 T 06-07-2017 LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 SUPERFAMILY SSF54001 10 196 2.75E-59 T 06-07-2017 LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 SUPERFAMILY SSF52440 379 509 1.35E-37 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 614 3.6E-65 T 06-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain LFZ55_RS03540 254df051c720e820c4f148f637a8b683 618 Pfam PF05257 CHAP domain 51 148 3.7E-12 T 06-07-2017 IPR007921 CHAP domain LFZ55_RS01645 b5b18899815b0550f418ca8413384991 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 1.1E-15 T 06-07-2017 IPR015102 Transcriptional regulator HTH-type, FeoC LFZ55_RS01645 b5b18899815b0550f418ca8413384991 78 SUPERFAMILY SSF46785 1 76 4.73E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS01645 b5b18899815b0550f418ca8413384991 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.088 T 06-07-2017 IPR023732 Probable [Fe-S]-dependent transcriptional repressor LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 37 61 - T 06-07-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 PRINTS PR00618 DksA/TraR zinc finger signature 37 48 1.9E-6 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 PRINTS PR00618 DksA/TraR zinc finger signature 49 61 1.9E-6 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 66 1.4E-21 T 06-07-2017 IPR012783 Zinc finger, C4 DksA/TraR-type LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 SUPERFAMILY SSF57716 37 72 4.13E-9 T 06-07-2017 LFZ55_RS24915 55e726abb67d3d986dc454b9da8c7741 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 66 1.6E-13 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LFZ55_RS21170 7d954791b5db393562f1df161d4e5a02 176 Pfam PF01202 Shikimate kinase 12 166 3.7E-10 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LFZ55_RS21170 7d954791b5db393562f1df161d4e5a02 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 167 2.7E-70 T 06-07-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 LFZ55_RS21170 7d954791b5db393562f1df161d4e5a02 176 Gene3D G3DSA:3.40.50.300 3 167 1.1E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21170 7d954791b5db393562f1df161d4e5a02 176 SUPERFAMILY SSF52540 3 166 3.2E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18110 c0f48259b84e58c1c4212db0ec98ccf9 46 SUPERFAMILY SSF57840 8 41 1.44E-13 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18110 c0f48259b84e58c1c4212db0ec98ccf9 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 11 41 2.8E-8 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18110 c0f48259b84e58c1c4212db0ec98ccf9 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.419 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18110 c0f48259b84e58c1c4212db0ec98ccf9 46 Pfam PF00444 Ribosomal protein L36 1 41 5.8E-16 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18110 c0f48259b84e58c1c4212db0ec98ccf9 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LFZ55_RS18560 b121be401cc64783cbc3ffac94a12372 385 Pfam PF00144 Beta-lactamase 45 357 9.5E-63 T 06-07-2017 IPR001466 Beta-lactamase-related LFZ55_RS18560 b121be401cc64783cbc3ffac94a12372 385 Gene3D G3DSA:3.40.710.10 34 373 6.1E-70 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS18560 b121be401cc64783cbc3ffac94a12372 385 SUPERFAMILY SSF56601 33 363 2.82E-68 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like LFZ55_RS18540 6697b87e648c130f77f3bb02a659361c 71 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 59 2.0E-26 T 06-07-2017 IPR020490 Uncharacterised protein family YaiZ LFZ55_RS18540 6697b87e648c130f77f3bb02a659361c 71 Pfam PF10953 Protein of unknown function (DUF2754) 1 66 9.5E-44 T 06-07-2017 IPR020490 Uncharacterised protein family YaiZ LFZ55_RS23805 28e92e145ca171f717d418f81cd95000 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.4E-70 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LFZ55_RS23805 28e92e145ca171f717d418f81cd95000 293 SUPERFAMILY SSF53448 1 286 4.73E-91 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS23805 28e92e145ca171f717d418f81cd95000 293 Gene3D G3DSA:3.90.550.10 1 263 1.1E-65 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS23805 28e92e145ca171f717d418f81cd95000 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-158 T 06-07-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LFZ55_RS10220 7e5948970de73bb326736c05687baa42 204 Gene3D G3DSA:2.60.40.1090 34 203 2.5E-32 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS10220 7e5948970de73bb326736c05687baa42 204 Pfam PF00419 Fimbrial protein 37 203 1.9E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS10220 7e5948970de73bb326736c05687baa42 204 SUPERFAMILY SSF49401 35 203 3.63E-28 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS09130 418f6c67a6029ce6d2d974d0adbac007 245 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 31 243 27.701 T 06-07-2017 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 LFZ55_RS09130 418f6c67a6029ce6d2d974d0adbac007 245 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 31 243 1.2E-114 T 06-07-2017 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 LFZ55_RS09130 418f6c67a6029ce6d2d974d0adbac007 245 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 237 1.8E-55 T 06-07-2017 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 LFZ55_RS09115 784c211ae58e1bc037859514f328f76d 263 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 235 6.3E-47 T 06-07-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 LFZ55_RS09115 784c211ae58e1bc037859514f328f76d 263 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 242 3.9E-68 T 06-07-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.1E-13 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.8E-20 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 Gene3D G3DSA:1.10.10.10 142 212 4.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 SUPERFAMILY SSF46894 148 212 2.75E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS14565 d98eecaba4b906676ac67d3a51d6b64d 216 SMART SM00421 153 210 1.8E-23 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS18810 7990dafb984aa12652706d1353db5c81 203 SUPERFAMILY SSF49401 37 202 4.87E-18 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS18810 7990dafb984aa12652706d1353db5c81 203 Gene3D G3DSA:2.60.40.1090 36 202 1.0E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS18810 7990dafb984aa12652706d1353db5c81 203 Pfam PF00419 Fimbrial protein 38 202 2.5E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS17300 ca6ba474fa0f61f59c3fe36be2125884 224 Gene3D G3DSA:1.10.3720.10 13 222 2.9E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17300 ca6ba474fa0f61f59c3fe36be2125884 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 4.7E-24 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS17300 ca6ba474fa0f61f59c3fe36be2125884 224 SUPERFAMILY SSF161098 14 210 4.97E-38 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17300 ca6ba474fa0f61f59c3fe36be2125884 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.5E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS20990 3689d90f43ada34a33c4d915c8b96b67 117 Pfam PF11990 Protein of unknown function (DUF3487) 3 115 5.2E-36 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 LFZ55_RS20990 3689d90f43ada34a33c4d915c8b96b67 117 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 114 1.1E-36 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 LFZ55_RS14180 77a86c97ba5c3ecda8bec77c5313b7fd 430 Pfam PF02687 FtsX-like permease family 301 423 5.7E-16 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LFZ55_RS14180 77a86c97ba5c3ecda8bec77c5313b7fd 430 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 35 430 6.7E-146 T 06-07-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LFZ55_RS14180 77a86c97ba5c3ecda8bec77c5313b7fd 430 Pfam PF12704 MacB-like periplasmic core domain 58 239 6.8E-13 T 06-07-2017 IPR025857 MacB-like periplasmic core domain LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 67 94 - T 06-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 SUPERFAMILY SSF103473 18 441 5.49E-35 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 Pfam PF13347 MFS/sugar transport protein 18 439 3.2E-86 T 06-07-2017 LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 16 452 6.6E-155 T 06-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 Gene3D G3DSA:1.20.1250.20 34 206 2.5E-7 T 06-07-2017 LFZ55_RS23390 2933de79bcd5dcd87cd807c5f37ce552 473 Gene3D G3DSA:1.20.1250.20 228 440 2.0E-17 T 06-07-2017 LFZ55_RS14645 5b2b0144c9e5fefb5a1127da21cd98e2 586 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 581 2.3E-170 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS14645 5b2b0144c9e5fefb5a1127da21cd98e2 586 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 579 5.0E-158 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS14645 5b2b0144c9e5fefb5a1127da21cd98e2 586 PIRSF PIRSF028304 1 584 3.6E-147 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 Gene3D G3DSA:3.40.50.720 143 308 5.3E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 SMART SM00829 19 339 1.1E-4 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 SUPERFAMILY SSF51735 127 306 1.56E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 Gene3D G3DSA:3.90.180.10 4 142 4.0E-54 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 SUPERFAMILY SSF50129 7 146 1.12E-42 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 SUPERFAMILY SSF50129 298 340 6.12E-5 T 06-07-2017 IPR011032 GroES-like LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 1.3E-39 T 06-07-2017 LFZ55_RS12060 1e73b4bf142b91615acb37cf5b089233 345 Pfam PF00107 Zinc-binding dehydrogenase 161 298 1.6E-17 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 SUPERFAMILY SSF46894 102 166 3.4E-12 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 SMART SM00421 113 170 7.2E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 116 130 3.5E-6 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 158 3.5E-6 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 146 3.5E-6 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 Gene3D G3DSA:1.10.10.10 106 163 1.1E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS13905 f13ba55ee17e43d35d9a6cd0d4eef508 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 161 3.6E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS12520 fae2ea4e4d7f447704aeed92ce7b7693 175 Pfam PF14534 Domain of unknown function (DUF4440) 66 158 4.0E-10 T 06-07-2017 IPR027843 Domain of unknown function DUF4440 LFZ55_RS12520 fae2ea4e4d7f447704aeed92ce7b7693 175 Gene3D G3DSA:3.10.450.50 31 167 1.2E-13 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS12520 fae2ea4e4d7f447704aeed92ce7b7693 175 SUPERFAMILY SSF54427 36 166 3.33E-20 T 06-07-2017 IPR032710 NTF2-like domain LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 Pfam PF01197 Ribosomal protein L31 1 78 1.4E-25 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 SUPERFAMILY SSF143800 1 80 1.22E-22 T 06-07-2017 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 8.4E-19 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS18115 8f3023952549d14fa003080500f3158f 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.243 T 06-07-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 9.3E-101 T 06-07-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 Gene3D G3DSA:3.40.50.300 3 242 1.7E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 SMART SM00382 29 229 2.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 SUPERFAMILY SSF52540 3 240 7.43E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS22165 9ef08a87605cbba2720e2dc7d55db2bc 262 Pfam PF00005 ABC transporter 20 181 1.7E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS08930 327908ad32d092094c9581da1409cbca 254 Pfam PF01292 Prokaryotic cytochrome b561 59 239 6.8E-21 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS08930 327908ad32d092094c9581da1409cbca 254 Gene3D G3DSA:1.20.950.20 53 243 5.9E-34 T 06-07-2017 LFZ55_RS08930 327908ad32d092094c9581da1409cbca 254 SUPERFAMILY SSF81342 56 247 8.63E-24 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 Pfam PF02120 Flagellar hook-length control protein FliK 277 358 1.8E-20 T 06-07-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 126 149 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 325 348 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 21 38 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 65 81 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 267 289 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 292 310 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 244 266 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 389 405 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS09555 81f38c4c336a3a37e6f054d53a9df056 406 PRINTS PR01007 Flagellar hook-length control protein signature 310 325 1.5E-114 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 Gene3D G3DSA:3.40.50.300 89 353 2.9E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 SMART SM00382 154 335 5.9E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 18 431 6.3E-191 T 06-07-2017 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 351 7.8E-69 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 10 431 1.4E-151 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LFZ55_RS13150 702ecf7e368a4e8b3d7b29c92bb6689a 433 SUPERFAMILY SSF52540 89 356 4.8E-90 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04050 64f1e291cd9795585fd7064387eb5067 204 SUPERFAMILY SSF100950 10 199 4.19E-57 T 06-07-2017 LFZ55_RS04050 64f1e291cd9795585fd7064387eb5067 204 PIRSF PIRSF006806 6 195 4.8E-34 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LFZ55_RS04050 64f1e291cd9795585fd7064387eb5067 204 Gene3D G3DSA:3.40.50.10420 11 198 6.1E-60 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain LFZ55_RS04050 64f1e291cd9795585fd7064387eb5067 204 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 3.0E-52 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LFZ55_RS04050 64f1e291cd9795585fd7064387eb5067 204 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 2.1E-44 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LFZ55_RS02475 3d8d3108f6b38d05f48c9e4c420f45cf 132 PIRSF PIRSF006318 1 132 1.7E-51 T 06-07-2017 IPR009386 Protein of unknown function DUF1043 LFZ55_RS02475 3d8d3108f6b38d05f48c9e4c420f45cf 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 1.3E-48 T 06-07-2017 IPR009386 Protein of unknown function DUF1043 LFZ55_RS09745 f95c0a639ae2d6b66a7786d9868381cb 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 1.9E-35 T 06-07-2017 IPR019620 Putative metal-binding protein LFZ55_RS09745 f95c0a639ae2d6b66a7786d9868381cb 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 7.6E-35 T 06-07-2017 IPR019620 Putative metal-binding protein LFZ55_RS02880 e3987c4003e3590c2894c740eed5baf3 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.861 T 06-07-2017 IPR023070 DnaA initiator-associating protein LFZ55_RS02880 e3987c4003e3590c2894c740eed5baf3 196 Gene3D G3DSA:3.40.50.10490 3 191 4.6E-55 T 06-07-2017 LFZ55_RS02880 e3987c4003e3590c2894c740eed5baf3 196 Pfam PF13580 SIS domain 9 144 5.3E-33 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LFZ55_RS02880 e3987c4003e3590c2894c740eed5baf3 196 SUPERFAMILY SSF53697 3 191 6.27E-51 T 06-07-2017 LFZ55_RS13555 5e082ce0de264cbd2c42d9cefec9e080 286 Pfam PF03881 Fructosamine kinase 1 285 1.7E-113 T 06-07-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 LFZ55_RS13555 5e082ce0de264cbd2c42d9cefec9e080 286 Gene3D G3DSA:3.30.200.20 32 90 1.0E-4 T 06-07-2017 LFZ55_RS13555 5e082ce0de264cbd2c42d9cefec9e080 286 PIRSF PIRSF006221 1 286 4.5E-93 T 06-07-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 LFZ55_RS13555 5e082ce0de264cbd2c42d9cefec9e080 286 Gene3D G3DSA:3.90.1200.10 96 258 8.9E-13 T 06-07-2017 LFZ55_RS13555 5e082ce0de264cbd2c42d9cefec9e080 286 SUPERFAMILY SSF56112 17 281 1.93E-41 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS03530 778a2a4f68ea25a047c4bd9beb4ae33b 226 Pfam PF13531 Bacterial extracellular solute-binding protein 2 225 4.3E-29 T 06-07-2017 LFZ55_RS03530 778a2a4f68ea25a047c4bd9beb4ae33b 226 Gene3D G3DSA:3.40.190.10 1 100 5.8E-13 T 06-07-2017 LFZ55_RS03530 778a2a4f68ea25a047c4bd9beb4ae33b 226 Gene3D G3DSA:3.40.190.10 101 190 1.2E-8 T 06-07-2017 LFZ55_RS03530 778a2a4f68ea25a047c4bd9beb4ae33b 226 SUPERFAMILY SSF53850 2 225 1.18E-30 T 06-07-2017 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 Gene3D G3DSA:3.40.640.10 45 315 7.2E-109 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 SUPERFAMILY SSF53383 1 396 8.11E-120 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 Pfam PF00155 Aminotransferase class I and II 28 392 1.3E-96 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS15635 9200ddcccfaacf3edb8638874800b599 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 06-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LFZ55_RS24620 af50e0c69a0ae314de43160e22db659d 309 Pfam PF04754 Putative transposase, YhgA-like 9 209 1.2E-84 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS24620 af50e0c69a0ae314de43160e22db659d 309 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 307 2.0E-84 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS12330 0a8079434fcafb3277db568f08f7d407 60 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 1 58 5.3E-14 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like LFZ55_RS09925 4e807390903a62b7de2cf2944c854c58 188 SUPERFAMILY SSF52499 4 188 4.97E-51 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS09925 4e807390903a62b7de2cf2944c854c58 188 Pfam PF00857 Isochorismatase family 9 183 4.8E-39 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS09925 4e807390903a62b7de2cf2944c854c58 188 Gene3D G3DSA:3.40.50.850 3 185 1.7E-52 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LFZ55_RS17725 feb4e42a4d97ab6071bd701ed24180bb 464 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LFZ55_RS17725 feb4e42a4d97ab6071bd701ed24180bb 464 Pfam PF00324 Amino acid permease 31 458 1.7E-116 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS17725 feb4e42a4d97ab6071bd701ed24180bb 464 PIRSF PIRSF006060 5 463 5.6E-77 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS15120 7ac27b5fa65dadc5609a06a43816fabd 178 Pfam PF16970 Type-1 fimbrial protein, A 50 178 3.4E-32 T 06-07-2017 LFZ55_RS15120 7ac27b5fa65dadc5609a06a43816fabd 178 Gene3D G3DSA:2.60.40.1090 24 178 1.8E-32 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS15120 7ac27b5fa65dadc5609a06a43816fabd 178 SUPERFAMILY SSF49401 25 178 3.63E-30 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS07495 5bb671434dfd143bffe235ea70e74bd3 228 Gene3D G3DSA:1.10.3720.10 8 219 3.6E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07495 5bb671434dfd143bffe235ea70e74bd3 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 4.1E-19 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS07495 5bb671434dfd143bffe235ea70e74bd3 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 1.1E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS07495 5bb671434dfd143bffe235ea70e74bd3 228 SUPERFAMILY SSF161098 7 205 1.57E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS24145 f0392303d49863ee3fb69b7fcd7c384a 194 Gene3D G3DSA:3.40.50.360 7 193 5.5E-50 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS24145 f0392303d49863ee3fb69b7fcd7c384a 194 Pfam PF03358 NADPH-dependent FMN reductase 12 154 8.7E-39 T 06-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LFZ55_RS24145 f0392303d49863ee3fb69b7fcd7c384a 194 SUPERFAMILY SSF52218 12 183 2.02E-43 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS09285 0d97a52add4a11c30c925ed1d9a89cbe 773 Gene3D G3DSA:1.10.530.10 616 701 1.1E-4 T 06-07-2017 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 SUPERFAMILY SSF56796 7 379 7.33E-122 T 06-07-2017 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 4.4E-195 T 06-07-2017 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 Gene3D G3DSA:1.20.1090.10 186 381 4.1E-69 T 06-07-2017 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 9.7E-116 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 Gene3D G3DSA:3.40.50.1970 4 185 1.9E-58 T 06-07-2017 LFZ55_RS04575 dba168eb2df7863f8cf30d21d17c9402 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LFZ55_RS10325 ea1ee3f2b9a05648ac4eae83ae58cce0 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 20.037 T 06-07-2017 IPR020907 PhoP/PhoQ regulator MgrB LFZ55_RS10325 ea1ee3f2b9a05648ac4eae83ae58cce0 47 Pfam PF13998 MgrB protein 19 47 3.1E-17 T 06-07-2017 IPR020907 PhoP/PhoQ regulator MgrB LFZ55_RS09810 b0f9a292b391c92ccd37eec7b3a89f94 194 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 3 188 45.343 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LFZ55_RS09810 b0f9a292b391c92ccd37eec7b3a89f94 194 PIRSF PIRSF003159 3 183 1.5E-90 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LFZ55_RS09810 b0f9a292b391c92ccd37eec7b3a89f94 194 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 3 194 2.0E-110 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LFZ55_RS09810 b0f9a292b391c92ccd37eec7b3a89f94 194 Pfam PF05280 Flagellar transcriptional activator (FlhC) 3 174 4.2E-81 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LFZ55_RS09810 b0f9a292b391c92ccd37eec7b3a89f94 194 SUPERFAMILY SSF160930 7 162 3.01E-64 T 06-07-2017 LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 Gene3D G3DSA:3.30.70.20 68 94 9.5E-15 T 06-07-2017 LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 SUPERFAMILY SSF54862 1 143 9.63E-39 T 06-07-2017 LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 Gene3D G3DSA:3.30.70.20 95 149 1.5E-15 T 06-07-2017 LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 Gene3D G3DSA:3.30.70.20 7 67 8.2E-10 T 06-07-2017 LFZ55_RS00875 146d0e0c1d35e14cd85b5b5353b04bb3 157 Pfam PF13247 4Fe-4S dicluster domain 54 142 2.2E-13 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 4.1E-10 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.5E-16 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 SUPERFAMILY SSF56784 6 217 1.54E-47 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 Gene3D G3DSA:3.40.50.1000 10 191 5.4E-27 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.4E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.4E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.4E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS01705 46f9d248a34c87cc1c7288fbf84ac85f 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.4E-6 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LFZ55_RS22180 62837b686f1492c1cb8054147c1895c0 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 9.2E-53 T 06-07-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LFZ55_RS22180 62837b686f1492c1cb8054147c1895c0 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 7 148 5.9E-52 T 06-07-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LFZ55_RS21010 a27aedb5991044a275ce9dfa118d5a69 129 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 6 126 6.5E-43 T 06-07-2017 IPR022262 Lipoprotein, putative LFZ55_RS14975 8b6af7fad385286009c8a879a1abb9b4 458 Gene3D G3DSA:1.20.1250.20 262 447 2.5E-20 T 06-07-2017 LFZ55_RS14975 8b6af7fad385286009c8a879a1abb9b4 458 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 439 1.4E-258 T 06-07-2017 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 LFZ55_RS14975 8b6af7fad385286009c8a879a1abb9b4 458 Pfam PF07690 Major Facilitator Superfamily 40 413 1.1E-46 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS14975 8b6af7fad385286009c8a879a1abb9b4 458 Gene3D G3DSA:1.20.1250.20 33 232 3.5E-42 T 06-07-2017 LFZ55_RS14975 8b6af7fad385286009c8a879a1abb9b4 458 SUPERFAMILY SSF103473 25 449 1.05E-78 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS20470 bd8ea7bad9b219e22268645aff293175 357 SUPERFAMILY SSF52151 21 279 3.92E-41 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS20470 bd8ea7bad9b219e22268645aff293175 357 Pfam PF01734 Patatin-like phospholipase 27 195 1.8E-18 T 06-07-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LFZ55_RS24570 f138bd942878de8803a736833fff9f4f 514 SUPERFAMILY SSF52540 102 498 1.12E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24570 f138bd942878de8803a736833fff9f4f 514 Pfam PF00437 Type II/IV secretion system protein 108 381 3.0E-41 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS24570 f138bd942878de8803a736833fff9f4f 514 Gene3D G3DSA:3.30.450.90 86 212 4.6E-14 T 06-07-2017 LFZ55_RS24570 f138bd942878de8803a736833fff9f4f 514 Gene3D G3DSA:3.40.50.300 220 507 3.5E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS02865 47cd0c31f8518e19c6b9d443fe2e1da0 172 SUPERFAMILY SSF52317 3 170 1.15E-46 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS02865 47cd0c31f8518e19c6b9d443fe2e1da0 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 1.6E-69 T 06-07-2017 IPR006286 Peptidase C56, PfpI LFZ55_RS02865 47cd0c31f8518e19c6b9d443fe2e1da0 172 Pfam PF01965 DJ-1/PfpI family 3 167 3.2E-55 T 06-07-2017 IPR002818 DJ-1/PfpI LFZ55_RS02865 47cd0c31f8518e19c6b9d443fe2e1da0 172 Gene3D G3DSA:3.40.50.880 1 171 9.1E-52 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS21295 2100621c52cda6f4c1b8e46b4a9233ef 33 PIRSF PIRSF003249 1 33 8.3E-26 T 06-07-2017 IPR012602 PyrBI operon leader peptide GO:0019856 LFZ55_RS21295 2100621c52cda6f4c1b8e46b4a9233ef 33 Pfam PF08052 PyrBI operon leader peptide 1 33 1.8E-21 T 06-07-2017 IPR012602 PyrBI operon leader peptide GO:0019856 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 Gene3D G3DSA:2.60.40.1070 156 243 4.8E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 Gene3D G3DSA:2.60.40.360 27 147 2.8E-38 T 06-07-2017 IPR008962 PapD-like LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 147 1.3E-34 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 PRINTS PR00969 Pili chaperone signature 27 36 1.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 PRINTS PR00969 Pili chaperone signature 165 180 1.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 PRINTS PR00969 Pili chaperone signature 104 121 1.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 PRINTS PR00969 Pili chaperone signature 72 93 1.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 PRINTS PR00969 Pili chaperone signature 129 144 1.8E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 SUPERFAMILY SSF49584 157 244 1.13E-18 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 SUPERFAMILY SSF49354 27 147 3.14E-33 T 06-07-2017 IPR008962 PapD-like LFZ55_RS10210 a2f44fe392e300159c310c8c591ff89c 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 230 1.8E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal LFZ55_RS10225 6c34445c50bcd587d22a9daa3601d8bc 247 Pfam PF13682 Chemoreceptor zinc-binding domain 131 198 2.1E-9 T 06-07-2017 IPR025991 Chemoreceptor zinc-binding domain LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 SUPERFAMILY SSF51905 4 180 4.82E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 SUPERFAMILY SSF51905 283 390 4.82E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 Pfam PF01494 FAD binding domain 7 180 4.3E-12 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 Gene3D G3DSA:3.50.50.60 6 247 8.2E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.2E-6 T 06-07-2017 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.2E-6 T 06-07-2017 LFZ55_RS19990 4a88c347b7d604be38c22bf60c5c234a 428 SUPERFAMILY SSF54373 180 283 3.49E-22 T 06-07-2017 LFZ55_RS15495 7b066905432e9bbeaceaee5aa88d8b76 182 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 180 2.9E-48 T 06-07-2017 IPR005247 YbhB/YbcL LFZ55_RS15495 7b066905432e9bbeaceaee5aa88d8b76 182 Gene3D G3DSA:3.90.280.10 25 182 2.4E-57 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS15495 7b066905432e9bbeaceaee5aa88d8b76 182 Pfam PF01161 Phosphatidylethanolamine-binding protein 42 180 4.5E-39 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS15495 7b066905432e9bbeaceaee5aa88d8b76 182 SUPERFAMILY SSF49777 25 181 1.3E-52 T 06-07-2017 IPR008914 Phosphatidylethanolamine-binding protein LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 275 2.1E-16 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 SUPERFAMILY SSF56645 61 283 7.89E-34 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 Gene3D G3DSA:1.20.140.10 277 444 9.4E-44 T 06-07-2017 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 1.4E-30 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 Gene3D G3DSA:2.40.110.10 181 276 3.1E-22 T 06-07-2017 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 SUPERFAMILY SSF47203 283 443 1.16E-41 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LFZ55_RS21660 2219a74f8579c8bee121ff1199cff0c2 540 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LFZ55_RS14560 84d91a40e65ea73d7c2981ed4846e26d 151 Pfam PF07012 Curlin associated repeat 71 97 5.5E-7 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS14560 84d91a40e65ea73d7c2981ed4846e26d 151 Pfam PF07012 Curlin associated repeat 97 130 2.7E-10 T 06-07-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 LFZ55_RS18625 8d039fc8ea228623c1c8e19ecda065c3 43 Pfam PF10617 Protein of unknown function (DUF2474) 5 43 6.0E-14 T 06-07-2017 IPR018895 Protein of unknown function DUF2474 LFZ55_RS04060 450a0385c8ec94e446c2964ca86362f5 109 SUPERFAMILY SSF102829 6 94 1.22E-24 T 06-07-2017 IPR007838 Cell division protein ZapA-like LFZ55_RS04060 450a0385c8ec94e446c2964ca86362f5 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 37.216 T 06-07-2017 IPR023771 Cell division protein ZapA, eubacteria LFZ55_RS04060 450a0385c8ec94e446c2964ca86362f5 109 Pfam PF05164 Cell division protein ZapA 6 90 7.3E-20 T 06-07-2017 IPR007838 Cell division protein ZapA-like LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 SUPERFAMILY SSF50370 35 186 1.74E-28 T 06-07-2017 IPR000772 Ricin B, lectin domain LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 PRINTS PR01389 Cytolethal distending toxin C signature 10 27 1.6E-20 T 06-07-2017 IPR003559 Cytolethal distending toxin C GO:0009405 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 PRINTS PR01389 Cytolethal distending toxin C signature 113 131 1.6E-20 T 06-07-2017 IPR003559 Cytolethal distending toxin C GO:0009405 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 PRINTS PR01389 Cytolethal distending toxin C signature 52 67 1.6E-20 T 06-07-2017 IPR003559 Cytolethal distending toxin C GO:0009405 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 PRINTS PR01389 Cytolethal distending toxin C signature 93 109 1.6E-20 T 06-07-2017 IPR003559 Cytolethal distending toxin C GO:0009405 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 PRINTS PR01389 Cytolethal distending toxin C signature 158 175 1.6E-20 T 06-07-2017 IPR003559 Cytolethal distending toxin C GO:0009405 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 Gene3D G3DSA:2.80.10.50 38 190 1.8E-46 T 06-07-2017 LFZ55_RS11515 0ea822f4450e213fd4dfc14d60288589 191 Pfam PF03498 Cytolethal distending toxin A/C domain 45 183 2.7E-27 T 06-07-2017 IPR003558 Cytolethal distending toxin A/C GO:0009405 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 Pfam PF05925 Enterobacterial virulence protein IpgD 1 557 0.0 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 277 295 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 205 220 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 355 374 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 178 196 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 8 23 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 516 532 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 421 438 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS15055 4ab8afc07819b0d3b99cdb0e4d2dd865 559 PRINTS PR01734 Type III secretion system outer membrane B protein family signature 240 252 3.3E-49 T 06-07-2017 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 LFZ55_RS01220 2d2ec89b3065915138119c1120449a2e 423 SMART SM00014 173 292 3.4E-10 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS01220 2d2ec89b3065915138119c1120449a2e 423 Gene3D G3DSA:1.20.144.10 91 312 3.7E-50 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS01220 2d2ec89b3065915138119c1120449a2e 423 Pfam PF01569 PAP2 superfamily 182 284 6.7E-15 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS01220 2d2ec89b3065915138119c1120449a2e 423 SUPERFAMILY SSF48317 100 310 5.23E-32 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.90.25.10 300 318 1.4E-12 T 06-07-2017 LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.90.25.10 206 219 1.4E-12 T 06-07-2017 LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 1.4E-74 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 SUPERFAMILY SSF51735 1 318 4.5E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.40.50.720 2 168 2.3E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.40.50.720 220 258 2.3E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.90.25.10 169 205 8.7E-39 T 06-07-2017 LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Gene3D G3DSA:3.90.25.10 259 299 8.7E-39 T 06-07-2017 LFZ55_RS08725 4f96f19e5d65de132885c2e1392f10e0 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 49.091 T 06-07-2017 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 LFZ55_RS08020 0c5937d5b16f13bd53018376b037e111 899 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 532 612 5.9E-24 T 06-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 Gene3D G3DSA:3.30.1120.10 443 487 3.6E-4 T 06-07-2017 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 Gene3D G3DSA:3.30.1120.10 374 389 3.6E-4 T 06-07-2017 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 Gene3D G3DSA:3.40.720.10 4 373 3.8E-61 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 Pfam PF00884 Sulfatase 4 335 2.1E-32 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 SUPERFAMILY SSF53649 4 387 4.8E-76 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS16020 7576f6ad991c59e51979263036c2c319 495 SUPERFAMILY SSF53649 441 481 4.8E-76 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LFZ55_RS16010 e6a5d17e055042cee3242a6ff007ea44 222 Gene3D G3DSA:1.10.3720.10 3 214 1.5E-34 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16010 e6a5d17e055042cee3242a6ff007ea44 222 SUPERFAMILY SSF161098 6 200 2.88E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16010 e6a5d17e055042cee3242a6ff007ea44 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 6.3E-13 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16010 e6a5d17e055042cee3242a6ff007ea44 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.6E-17 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS24440 6ae37e49ff7722ffe691ded767a92e9e 83 SUPERFAMILY SSF47413 1 54 7.88E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS24440 6ae37e49ff7722ffe691ded767a92e9e 83 Gene3D G3DSA:1.10.260.40 6 38 1.0E-5 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 SUPERFAMILY SSF52540 4 325 4.4E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 324 8.4E-129 T 06-07-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 Gene3D G3DSA:3.40.50.300 100 324 2.4E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 Pfam PF00437 Type II/IV secretion system protein 117 251 1.3E-40 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LFZ55_RS03830 1abc9c98d313774080569ab58836993f 326 SMART SM00382 119 271 0.0025 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS08820 f51db3eb0cbff0025c662ffb888df1c0 540 SUPERFAMILY SSF56112 242 443 9.57E-11 T 06-07-2017 IPR011009 Protein kinase-like domain LFZ55_RS08820 f51db3eb0cbff0025c662ffb888df1c0 540 Gene3D G3DSA:3.90.1200.10 388 443 2.3E-4 T 06-07-2017 LFZ55_RS08820 f51db3eb0cbff0025c662ffb888df1c0 540 Gene3D G3DSA:3.90.550.10 22 120 3.3E-5 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08820 f51db3eb0cbff0025c662ffb888df1c0 540 SUPERFAMILY SSF53448 22 215 1.2E-7 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS02650 851089bcf5f5b062031a34b1aead2c5c 325 Pfam PF01699 Sodium/calcium exchanger protein 4 143 7.0E-27 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 LFZ55_RS02650 851089bcf5f5b062031a34b1aead2c5c 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 3.2E-26 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 LFZ55_RS02650 851089bcf5f5b062031a34b1aead2c5c 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 5.1E-97 T 06-07-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 LFZ55_RS07300 76541a299c58a7bd1346e22a53c56962 251 Pfam PF04333 MlaA lipoprotein 29 222 5.2E-66 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 LFZ55_RS07300 76541a299c58a7bd1346e22a53c56962 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 8.8E-35 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 LFZ55_RS07300 76541a299c58a7bd1346e22a53c56962 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 8.8E-35 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 LFZ55_RS07300 76541a299c58a7bd1346e22a53c56962 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 8.8E-35 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 LFZ55_RS07300 76541a299c58a7bd1346e22a53c56962 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 8.8E-35 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 5.2E-178 T 06-07-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 SUPERFAMILY SSF50249 39 128 2.44E-19 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-6 T 06-07-2017 IPR003029 S1 domain GO:0003676 LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 SMART SM00316 37 122 1.0E-9 T 06-07-2017 IPR022967 RNA-binding domain, S1 LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.4E-101 T 06-07-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LFZ55_RS02405 fee10136f8513cb4e35c8b7a6805d116 489 Gene3D G3DSA:2.40.50.140 30 128 1.4E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 50 70 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 111 130 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 204 216 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 230 250 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 260 277 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 175 193 3.9E-71 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 32 269 2.2E-69 T 06-07-2017 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 Pfam PF07201 HrpJ-like domain 51 211 4.8E-43 T 06-07-2017 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 LFZ55_RS04925 f86fddc2fe962e593903da534e8ac360 372 SUPERFAMILY SSF140591 65 257 1.22E-46 T 06-07-2017 LFZ55_RS20915 ddf50a2664854f5cb88d4b001ed18ce8 374 SUPERFAMILY SSF56935 24 374 5.19E-46 T 06-07-2017 LFZ55_RS20915 ddf50a2664854f5cb88d4b001ed18ce8 374 Gene3D G3DSA:2.40.160.10 24 374 9.9E-57 T 06-07-2017 IPR023614 Porin domain LFZ55_RS20915 ddf50a2664854f5cb88d4b001ed18ce8 374 Pfam PF13609 Gram-negative porin 14 354 4.6E-32 T 06-07-2017 LFZ55_RS19350 5bea3054d0379fa9934c0df4f711aee4 385 Gene3D G3DSA:1.10.10.60 339 358 6.3E-4 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS19350 5bea3054d0379fa9934c0df4f711aee4 385 Pfam PF05651 Putative sugar diacid recognition 6 138 7.1E-49 T 06-07-2017 IPR008599 Putative sugar diacid recognition LFZ55_RS19350 5bea3054d0379fa9934c0df4f711aee4 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 381 4.3E-22 T 06-07-2017 IPR025736 PucR C-terminal helix-turn-helix domain LFZ55_RS07775 5400f0240d3e712d2c4977f5a81784bf 327 Gene3D G3DSA:3.90.550.10 8 144 1.7E-24 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS07775 5400f0240d3e712d2c4977f5a81784bf 327 SUPERFAMILY SSF53448 8 230 1.59E-36 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS07775 5400f0240d3e712d2c4977f5a81784bf 327 Pfam PF00535 Glycosyl transferase family 2 11 171 6.4E-32 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS07775 5400f0240d3e712d2c4977f5a81784bf 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 325 59.829 T 06-07-2017 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 LFZ55_RS07475 9076cc22cae123727d0e8665dccce769 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.5E-67 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 LFZ55_RS07475 9076cc22cae123727d0e8665dccce769 189 SUPERFAMILY SSF52507 2 188 3.01E-59 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS07475 9076cc22cae123727d0e8665dccce769 189 Pfam PF02441 Flavoprotein 2 127 3.9E-26 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS07475 9076cc22cae123727d0e8665dccce769 189 Gene3D G3DSA:3.40.50.1950 2 188 3.2E-76 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LFZ55_RS07475 9076cc22cae123727d0e8665dccce769 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.757 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 LFZ55_RS06995 cdf9b4df195b987f18c7986e4d1b708f 178 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 38 178 46.732 T 06-07-2017 IPR023072 Acetyltransferase, YpeA GO:0016747 LFZ55_RS06995 cdf9b4df195b987f18c7986e4d1b708f 178 Pfam PF00583 Acetyltransferase (GNAT) family 85 161 1.3E-15 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS06995 cdf9b4df195b987f18c7986e4d1b708f 178 Gene3D G3DSA:3.40.630.30 36 160 6.9E-35 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06995 cdf9b4df195b987f18c7986e4d1b708f 178 SUPERFAMILY SSF55729 29 163 4.25E-29 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 SUPERFAMILY SSF103473 211 474 4.58E-6 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 Pfam PF00854 POT family 77 440 7.4E-82 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 SUPERFAMILY SSF103473 4 288 5.49E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 Gene3D G3DSA:1.20.1250.20 12 185 3.3E-19 T 06-07-2017 LFZ55_RS06085 5c6aab49162fd30bac12f3db4a124394 486 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 454 3.2E-81 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 06-07-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 1.9E-112 T 06-07-2017 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 Pfam PF01063 Amino-transferase class IV 25 246 3.7E-43 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 Gene3D G3DSA:3.20.10.10 123 259 4.0E-39 T 06-07-2017 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 SUPERFAMILY SSF56752 2 257 2.49E-66 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LFZ55_RS14275 ed383c4ca6e40d9722af1d73dc742af3 269 Gene3D G3DSA:3.30.470.10 1 107 3.0E-32 T 06-07-2017 LFZ55_RS05080 88d8a4b9e7bb457cc71e891b5dbca31f 251 SUPERFAMILY SSF46894 155 211 4.08E-6 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.5E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 SUPERFAMILY SSF46785 1 84 2.53E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 Gene3D G3DSA:1.10.10.10 1 78 1.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 SUPERFAMILY SSF53850 87 294 2.64E-35 T 06-07-2017 LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 Gene3D G3DSA:3.40.190.10 87 191 3.8E-20 T 06-07-2017 LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 Gene3D G3DSA:3.40.190.10 192 261 5.0E-17 T 06-07-2017 LFZ55_RS17140 be1ef6cad6d2be509249aebef8282e65 308 Pfam PF03466 LysR substrate binding domain 86 282 4.2E-34 T 06-07-2017 IPR005119 LysR, substrate-binding LFZ55_RS20920 cc2c9222b1e5dec3d878d048412c1555 432 Gene3D G3DSA:3.40.50.1240 270 428 2.3E-63 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS20920 cc2c9222b1e5dec3d878d048412c1555 432 Gene3D G3DSA:3.40.50.1240 23 134 2.3E-63 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS20920 cc2c9222b1e5dec3d878d048412c1555 432 Gene3D G3DSA:3.40.50.1240 135 267 6.2E-35 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS20920 cc2c9222b1e5dec3d878d048412c1555 432 SUPERFAMILY SSF53254 25 420 4.13E-50 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS20920 cc2c9222b1e5dec3d878d048412c1555 432 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 56 369 1.4E-16 T 06-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.1E-93 T 06-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 SUPERFAMILY SSF88697 251 310 1.99E-14 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.6E-56 T 06-07-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 Gene3D G3DSA:2.30.130.10 250 312 1.3E-28 T 06-07-2017 IPR015947 PUA-like domain LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 6.6E-19 T 06-07-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 SUPERFAMILY SSF55120 10 246 1.38E-83 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 6.0E-22 T 06-07-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 LFZ55_RS02800 2589b5acc157067c19986c2de280bd75 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.75 T 06-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS07380 10058229ef97857fb842962136b8d7ba 122 Pfam PF00877 NlpC/P60 family 23 95 8.7E-5 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS07380 10058229ef97857fb842962136b8d7ba 122 Gene3D G3DSA:3.90.1720.10 21 95 9.3E-4 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain LFZ55_RS05650 d892f98fd95f4d7d0231879af09c7ecb 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 1 106 2.0E-43 T 06-07-2017 LFZ55_RS13320 8c6faaa75770e9e2e4cac5f3e95d00ef 245 SUPERFAMILY SSF52317 2 240 5.72E-68 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS13320 8c6faaa75770e9e2e4cac5f3e95d00ef 245 Gene3D G3DSA:3.40.50.880 2 241 1.7E-92 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS13320 8c6faaa75770e9e2e4cac5f3e95d00ef 245 Pfam PF07090 Putative glutamine amidotransferase 2 244 1.9E-124 T 06-07-2017 IPR010768 Putative glutamine amidotransferase LFZ55_RS13320 8c6faaa75770e9e2e4cac5f3e95d00ef 245 PIRSF PIRSF034405 1 245 9.4E-137 T 06-07-2017 IPR017027 Uncharacterised conserved protein UCP034405 LFZ55_RS03215 2db59e29655993e5746eaf27a29dae3a 303 Pfam PF05681 Fumarate hydratase (Fumerase) 16 284 3.0E-79 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS03215 2db59e29655993e5746eaf27a29dae3a 303 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 287 1.1E-122 T 06-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LFZ55_RS23625 10d40e5ed4e19747d6aea6ac0729785c 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 6.5E-88 T 06-07-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 LFZ55_RS23625 10d40e5ed4e19747d6aea6ac0729785c 299 Pfam PF00892 EamA-like transporter family 2 128 1.1E-7 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS23625 10d40e5ed4e19747d6aea6ac0729785c 299 Pfam PF00892 EamA-like transporter family 139 274 4.8E-10 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS23625 10d40e5ed4e19747d6aea6ac0729785c 299 SUPERFAMILY SSF103481 200 278 2.09E-8 T 06-07-2017 LFZ55_RS23625 10d40e5ed4e19747d6aea6ac0729785c 299 SUPERFAMILY SSF103481 35 131 1.44E-5 T 06-07-2017 LFZ55_RS17135 51be50008c0670f4aea78f6ec779a372 150 Pfam PF01475 Ferric uptake regulator family 10 130 2.1E-48 T 06-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LFZ55_RS17135 51be50008c0670f4aea78f6ec779a372 150 Gene3D G3DSA:1.10.10.10 3 82 5.7E-31 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17135 51be50008c0670f4aea78f6ec779a372 150 SUPERFAMILY SSF46785 6 134 2.67E-45 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS07530 524a39b8606deb0c00bfa2885f0f4250 184 Pfam PF00293 NUDIX domain 37 155 7.3E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS07530 524a39b8606deb0c00bfa2885f0f4250 184 SUPERFAMILY SSF55811 10 166 1.0E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS07530 524a39b8606deb0c00bfa2885f0f4250 184 Gene3D G3DSA:3.90.79.10 4 175 4.5E-63 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS07530 524a39b8606deb0c00bfa2885f0f4250 184 PIRSF PIRSF017340 2 172 4.0E-72 T 06-07-2017 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 LFZ55_RS10950 2129a00c5177ffb2ba2691352879802a 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 2.9E-53 T 06-07-2017 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 LFZ55_RS10950 2129a00c5177ffb2ba2691352879802a 236 Gene3D G3DSA:1.10.3480.10 10 134 1.5E-8 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS10950 2129a00c5177ffb2ba2691352879802a 236 SUPERFAMILY SSF89155 5 163 6.02E-32 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS10950 2129a00c5177ffb2ba2691352879802a 236 Pfam PF02613 Nitrate reductase delta subunit 37 156 1.3E-12 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone LFZ55_RS05605 9076b2ddd25f142d52a30e2b5a11cc1f 184 SUPERFAMILY SSF49401 29 184 1.24E-30 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS05605 9076b2ddd25f142d52a30e2b5a11cc1f 184 Pfam PF00419 Fimbrial protein 30 184 3.2E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS05605 9076b2ddd25f142d52a30e2b5a11cc1f 184 Gene3D G3DSA:2.60.40.1090 28 184 1.0E-33 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 166 176 4.2E-34 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 228 240 4.2E-34 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 272 289 4.2E-34 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 118 131 4.2E-34 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 227 296 6.9E-13 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 Gene3D G3DSA:2.30.330.10 214 300 4.1E-21 T 06-07-2017 LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 SUPERFAMILY SSF101801 224 300 1.83E-14 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS04955 dc3c8e66ed46a8054c794fefb786f06c 303 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 30 295 2.6E-58 T 06-07-2017 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 12 878 0.0 T 06-07-2017 IPR022303 Conjugative transfer ATPase LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 Gene3D G3DSA:3.40.50.300 473 543 1.7E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 Gene3D G3DSA:3.40.50.300 682 773 1.7E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 21 283 3.4E-70 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 SUPERFAMILY SSF52540 581 841 1.8E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21015 a12659373ef757bb95d2075f283922da 882 SUPERFAMILY SSF52540 412 554 1.8E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS21135 d598264b8d594f7dd20b55336f498d3c 288 SUPERFAMILY SSF161098 50 272 7.59E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS21135 d598264b8d594f7dd20b55336f498d3c 288 Gene3D G3DSA:1.10.3720.10 2 272 3.1E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS21135 d598264b8d594f7dd20b55336f498d3c 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 280 7.4E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01335 25c047aee555a72e3e6a6234bd4aa3b1 374 Pfam PF12698 ABC-2 family transporter protein 28 363 2.3E-32 T 06-07-2017 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:1.10.486.10 583 728 9.2E-58 T 06-07-2017 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.90.320.10 890 1178 3.3E-107 T 06-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1173 23.118 T 06-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 06-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 436 2.0E-64 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 SUPERFAMILY SSF52540 16 80 2.19E-109 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 SUPERFAMILY SSF52540 118 202 2.19E-109 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 SUPERFAMILY SSF52540 325 821 2.19E-109 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 546 809 3.0E-17 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.40.50.300 14 82 7.1E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.40.50.300 351 449 7.1E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.40.50.300 120 150 7.1E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:1.10.3170.10 155 349 3.7E-69 T 06-07-2017 LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.40.50.300 729 883 1.8E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 Gene3D G3DSA:3.40.50.300 450 580 1.8E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS04470 23ba475d6745f195aa21897fbbdedf76 1181 SUPERFAMILY SSF52980 899 1174 8.58E-92 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 SUPERFAMILY SSF63829 7 285 3.6E-62 T 06-07-2017 LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 254 4.1E-75 T 06-07-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 1.0E-21 T 06-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 1.0E-21 T 06-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 1.0E-21 T 06-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 1.0E-21 T 06-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.0E-21 T 06-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) LFZ55_RS05825 613854de9f9cb25d6d7a73db84cb5a5b 302 Gene3D G3DSA:2.120.10.30 5 287 2.0E-81 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like LFZ55_RS18400 80c94133c9fe71330e9cdc79aecf050b 110 Pfam PF02699 Preprotein translocase subunit 22 99 5.1E-26 T 06-07-2017 IPR003849 Preprotein translocase YajC LFZ55_RS18400 80c94133c9fe71330e9cdc79aecf050b 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 06-07-2017 IPR003849 Preprotein translocase YajC LFZ55_RS18400 80c94133c9fe71330e9cdc79aecf050b 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 06-07-2017 IPR003849 Preprotein translocase YajC LFZ55_RS18400 80c94133c9fe71330e9cdc79aecf050b 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 1.0E-34 T 06-07-2017 IPR003849 Preprotein translocase YajC LFZ55_RS18400 80c94133c9fe71330e9cdc79aecf050b 110 SMART SM01323 19 102 1.5E-36 T 06-07-2017 IPR003849 Preprotein translocase YajC LFZ55_RS23575 185ffcaffba15a5aa431d0cf0f29cb0e 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.5E-21 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LFZ55_RS23575 185ffcaffba15a5aa431d0cf0f29cb0e 84 Pfam PF02416 mttA/Hcf106 family 4 55 4.0E-15 T 06-07-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LFZ55_RS23575 185ffcaffba15a5aa431d0cf0f29cb0e 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 24.707 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 Gene3D G3DSA:2.60.40.920 442 523 2.4E-8 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 PRINTS PR01369 Intimin signature 264 283 2.9E-16 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 PRINTS PR01369 Intimin signature 168 183 2.9E-16 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 PRINTS PR01369 Intimin signature 351 363 2.9E-16 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 PRINTS PR01369 Intimin signature 196 215 2.9E-16 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 SUPERFAMILY SSF49373 441 523 5.81E-7 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 Pfam PF11924 Invasin beta-domain of outer membrane 49 316 2.7E-93 T 06-07-2017 IPR024519 Invasin beta-domain of outer membrane LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 Gene3D G3DSA:2.60.40.1080 551 603 1.7E-9 T 06-07-2017 LFZ55_RS18770 5fa0b8f8501f10775a5046f26d856d8d 710 SUPERFAMILY SSF49373 542 606 2.62E-12 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments LFZ55_RS05880 2b8a4156234a24316e0b6f37ac1bf025 151 Pfam PF14328 Domain of unknown function (DUF4385) 7 148 1.3E-66 T 06-07-2017 IPR025494 Protein of unknown function DUF4385 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 4.2E-28 T 06-07-2017 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 2 72 2.3E-28 T 06-07-2017 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS02110 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.8E-49 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS15695 fd6a0a490118bb9feb741cd8ccb4e94b 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.707 T 06-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 LFZ55_RS15695 fd6a0a490118bb9feb741cd8ccb4e94b 248 Gene3D G3DSA:3.90.550.10 1 247 1.9E-83 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS15695 fd6a0a490118bb9feb741cd8ccb4e94b 248 Pfam PF02348 Cytidylyltransferase 4 221 2.5E-72 T 06-07-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 LFZ55_RS15695 fd6a0a490118bb9feb741cd8ccb4e94b 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.9E-133 T 06-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 LFZ55_RS15695 fd6a0a490118bb9feb741cd8ccb4e94b 248 SUPERFAMILY SSF53448 3 245 3.15E-65 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS08320 e14ebf59cfb27b230e23fb73ae61f335 332 SUPERFAMILY SSF53822 25 330 3.34E-85 T 06-07-2017 IPR028082 Periplasmic binding protein-like I LFZ55_RS08320 e14ebf59cfb27b230e23fb73ae61f335 332 Gene3D G3DSA:3.40.50.2300 169 315 2.5E-41 T 06-07-2017 LFZ55_RS08320 e14ebf59cfb27b230e23fb73ae61f335 332 Pfam PF13407 Periplasmic binding protein domain 28 299 1.6E-63 T 06-07-2017 IPR025997 Periplasmic binding protein LFZ55_RS08320 e14ebf59cfb27b230e23fb73ae61f335 332 Gene3D G3DSA:3.40.50.2300 25 168 2.1E-40 T 06-07-2017 LFZ55_RS21185 7b2956e109bd6daa826fed4274df1184 439 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 6.3E-199 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS21185 7b2956e109bd6daa826fed4274df1184 439 PIRSF PIRSF002746 1 439 1.0E-157 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS21185 7b2956e109bd6daa826fed4274df1184 439 Pfam PF02447 GntP family permease 1 436 2.8E-183 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS10405 62f9c4d8d4a83b096cdf04bd2e9d288b 454 SUPERFAMILY SSF143548 16 158 1.8E-45 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS10405 62f9c4d8d4a83b096cdf04bd2e9d288b 454 Pfam PF03313 Serine dehydratase alpha chain 185 448 7.6E-96 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit LFZ55_RS10405 62f9c4d8d4a83b096cdf04bd2e9d288b 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 9.7E-229 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS10405 62f9c4d8d4a83b096cdf04bd2e9d288b 454 Gene3D G3DSA:3.30.1330.90 10 158 4.3E-54 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 LFZ55_RS10405 62f9c4d8d4a83b096cdf04bd2e9d288b 454 Pfam PF03315 Serine dehydratase beta chain 3 155 3.5E-56 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 LFZ55_RS10825 4f3060eb03fb32ce7a5c659f58cffa8d 194 Pfam PF14065 Protein of unknown function (DUF4255) 9 174 1.9E-23 T 06-07-2017 IPR025351 Protein of unknown function DUF4255 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 06-07-2017 IPR013105 Tetratricopeptide repeat 2 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 SMART SM00028 96 129 2.0E-4 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 SMART SM00028 62 95 0.0033 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 SMART SM00028 234 267 17.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 PIRSF PIRSF004654 1 292 4.5E-120 T 06-07-2017 IPR023605 Lipoprotein NlpI LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 Gene3D G3DSA:1.25.40.10 49 267 6.4E-32 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS02815 ee9f585d032e5e6847fbd7d0e301c02d 294 SUPERFAMILY SSF48452 27 283 1.87E-77 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 8.5E-80 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 Gene3D G3DSA:2.30.330.10 242 323 8.6E-6 T 06-07-2017 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 SUPERFAMILY SSF103039 49 231 4.18E-18 T 06-07-2017 IPR028976 CheC-like domain LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 SUPERFAMILY SSF101801 249 323 1.7E-12 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 1.6E-117 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 PIRSF PIRSF002888 2 331 1.4E-99 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 3.8E-16 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-32 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-32 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.9E-32 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS09545 7d79ec3e75df43475b291a0049389cb4 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.9E-32 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LFZ55_RS08715 60fbf094feca27fbe45da1e6653765b2 184 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 180 7.8E-117 T 06-07-2017 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF LFZ55_RS08715 60fbf094feca27fbe45da1e6653765b2 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 3.7E-6 T 06-07-2017 IPR001451 Hexapeptide repeat LFZ55_RS08715 60fbf094feca27fbe45da1e6653765b2 184 Gene3D G3DSA:2.160.10.10 17 179 6.3E-39 T 06-07-2017 LFZ55_RS08715 60fbf094feca27fbe45da1e6653765b2 184 SUPERFAMILY SSF51161 19 177 2.36E-35 T 06-07-2017 IPR011004 Trimeric LpxA-like LFZ55_RS08715 60fbf094feca27fbe45da1e6653765b2 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LFZ55_RS17980 bdbcb2d596f94d3fd3b8f52b4ad066a2 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 2.7E-76 T 06-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LFZ55_RS17980 bdbcb2d596f94d3fd3b8f52b4ad066a2 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 7.1E-77 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LFZ55_RS17980 bdbcb2d596f94d3fd3b8f52b4ad066a2 558 Pfam PF02254 TrkA-N domain 421 534 3.7E-24 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LFZ55_RS17980 bdbcb2d596f94d3fd3b8f52b4ad066a2 558 SUPERFAMILY SSF51735 418 549 2.42E-28 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS17980 bdbcb2d596f94d3fd3b8f52b4ad066a2 558 Gene3D G3DSA:3.40.50.720 414 548 9.9E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS16260 292c5a26286ce2a17a7990d4367401cd 58 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 1 52 0.003 T 06-07-2017 IPR020126 Protein of unknown function DUF2732 LFZ55_RS16260 292c5a26286ce2a17a7990d4367401cd 58 Gene3D G3DSA:1.20.1290.10 12 57 7.2E-4 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LFZ55_RS16260 292c5a26286ce2a17a7990d4367401cd 58 Pfam PF10809 Protein of unknown function (DUF2732) 1 48 2.7E-14 T 06-07-2017 IPR020126 Protein of unknown function DUF2732 LFZ55_RS06860 df6f9f37d457fd35f668bb48bb21d7ea 347 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 1.4E-92 T 06-07-2017 IPR009560 Protein of unknown function DUF1176 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 PIRSF PIRSF029827 1 90 3.5E-44 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 2 76 2.0E-39 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.701 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 Gene3D G3DSA:1.10.3880.10 1 90 1.8E-43 T 06-07-2017 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 4.4E-40 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LFZ55_RS03770 6765abb91565edb3e606bed1c0655fcd 91 SUPERFAMILY SSF111148 1 90 9.16E-40 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LFZ55_RS16295 ff13506d3d06a39db361db2bd741b2ec 593 Pfam PF10592 AIPR protein 257 500 2.5E-45 T 06-07-2017 IPR018891 Abortive bacteriophage infection, resistance LFZ55_RS18950 fe8d71e40e5dea3b462a8039dfec403b 145 Pfam PF01797 Transposase IS200 like 12 130 3.0E-35 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS18950 fe8d71e40e5dea3b462a8039dfec403b 145 SMART SM01321 11 130 3.0E-39 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS18950 fe8d71e40e5dea3b462a8039dfec403b 145 Gene3D G3DSA:3.30.70.1290 2 133 2.4E-42 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS18950 fe8d71e40e5dea3b462a8039dfec403b 145 SUPERFAMILY SSF143422 1 131 7.72E-41 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS22160 3bbf5ff78d253ce1790f69ac0d3e05e4 147 Gene3D G3DSA:3.10.180.10 7 143 2.1E-40 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS22160 3bbf5ff78d253ce1790f69ac0d3e05e4 147 SUPERFAMILY SSF54593 2 139 4.73E-29 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS22160 3bbf5ff78d253ce1790f69ac0d3e05e4 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 138 1.6E-6 T 06-07-2017 IPR028973 PhnB-like LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 Pfam PF00293 NUDIX domain 1 130 7.1E-20 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 47.268 T 06-07-2017 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.23+3.6.1.19+3.6.1.12|KEGG: 00983+3.6.1.19|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-6 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-6 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 Gene3D G3DSA:3.90.79.10 4 123 2.6E-24 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS07790 d0a6d0e621278697d4272f9b12b29b79 141 SUPERFAMILY SSF55811 2 123 1.62E-26 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS09415 0361398ec112463699617290b45f7b8c 746 Gene3D G3DSA:1.10.530.10 629 701 1.9E-5 T 06-07-2017 LFZ55_RS20245 73ba8ce9390a855db0cf499e0598ca27 114 Pfam PF16083 LydA holin phage, holin superfamily III 21 100 2.3E-24 T 06-07-2017 IPR032126 LydA-like holin LFZ55_RS17910 4eadd0545b6c7481557b33af2a0f9fb3 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS17910 4eadd0545b6c7481557b33af2a0f9fb3 228 SMART SM00382 35 223 3.2E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS17910 4eadd0545b6c7481557b33af2a0f9fb3 228 Pfam PF00005 ABC transporter 27 174 2.0E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS17910 4eadd0545b6c7481557b33af2a0f9fb3 228 SUPERFAMILY SSF52540 7 226 1.25E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17910 4eadd0545b6c7481557b33af2a0f9fb3 228 Gene3D G3DSA:3.40.50.300 6 227 9.3E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS17125 5fa3bd2b2f21ac110e9e591a6ffdfe5e 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 87 1.1E-8 T 06-07-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LFZ55_RS15800 518ac3949dc6c1df53288a26656ced89 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 7.0E-113 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 LFZ55_RS02220 20c16023b15ea6f300d7acdb4881baca 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 2.4E-58 T 06-07-2017 IPR007456 Smg LFZ55_RS02220 20c16023b15ea6f300d7acdb4881baca 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.27 T 06-07-2017 IPR007456 Smg LFZ55_RS05905 94baa511da5b43820436fbb6cbdda094 232 Pfam PF03942 DTW domain 30 211 2.0E-42 T 06-07-2017 IPR005636 DTW LFZ55_RS05905 94baa511da5b43820436fbb6cbdda094 232 SMART SM01144 27 218 1.6E-67 T 06-07-2017 IPR005636 DTW LFZ55_RS11635 8d347a2b490aae4493b77d576f187857 822 SUPERFAMILY SSF82199 680 800 1.02E-11 T 06-07-2017 LFZ55_RS11635 8d347a2b490aae4493b77d576f187857 822 Gene3D G3DSA:2.170.270.10 679 801 4.3E-11 T 06-07-2017 LFZ55_RS06480 20f877784b5181da01420a04eba76f7b 145 Gene3D G3DSA:2.60.120.260 56 111 0.001 T 06-07-2017 IPR008979 Galactose-binding domain-like LFZ55_RS12920 02164d9c510292d9b89d874cbdbde0f4 193 PIRSF PIRSF006102 1 193 1.3E-60 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LFZ55_RS12920 02164d9c510292d9b89d874cbdbde0f4 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 7.2E-61 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LFZ55_RS12920 02164d9c510292d9b89d874cbdbde0f4 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.511 T 06-07-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 LFZ55_RS12920 02164d9c510292d9b89d874cbdbde0f4 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 3.0E-92 T 06-07-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 LFZ55_RS00375 6a75b1a476327468064f29ae1391b97f 262 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 110 3.6E-13 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS00375 6a75b1a476327468064f29ae1391b97f 262 SMART SM00862 33 111 8.4E-11 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS00375 6a75b1a476327468064f29ae1391b97f 262 Gene3D G3DSA:1.10.10.10 31 113 5.8E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS00375 6a75b1a476327468064f29ae1391b97f 262 SUPERFAMILY SSF46894 27 111 5.95E-11 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS08010 256e43c494c9ed023fc4f7ccec03a9ca 106 Pfam PF16931 Putative phage holin 10 94 4.4E-17 T 06-07-2017 IPR032637 Putative phage holin-like LFZ55_RS00035 ab2573879ce9a9ee23d3300b5aa989d5 405 SUPERFAMILY SSF48230 77 346 9.06E-45 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 LFZ55_RS00035 ab2573879ce9a9ee23d3300b5aa989d5 405 Pfam PF05426 Alginate lyase 71 348 5.3E-78 T 06-07-2017 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 LFZ55_RS00035 ab2573879ce9a9ee23d3300b5aa989d5 405 Gene3D G3DSA:1.50.10.110 53 369 3.6E-74 T 06-07-2017 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 LFZ55_RS03600 e2550f00e2897134b3882f4029fc0241 307 SUPERFAMILY SSF88713 4 280 1.98E-62 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS03600 e2550f00e2897134b3882f4029fc0241 307 Pfam PF01522 Polysaccharide deacetylase 46 151 5.9E-17 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS03600 e2550f00e2897134b3882f4029fc0241 307 Gene3D G3DSA:3.20.20.370 5 279 7.7E-79 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LFZ55_RS12650 858ad655548c0b17f4af392d62343852 513 Pfam PF13347 MFS/sugar transport protein 16 454 1.0E-57 T 06-07-2017 LFZ55_RS12650 858ad655548c0b17f4af392d62343852 513 Gene3D G3DSA:1.20.1250.20 242 434 2.4E-8 T 06-07-2017 LFZ55_RS12650 858ad655548c0b17f4af392d62343852 513 SUPERFAMILY SSF103473 14 458 8.76E-30 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12650 858ad655548c0b17f4af392d62343852 513 Gene3D G3DSA:1.20.1250.20 21 205 1.3E-12 T 06-07-2017 LFZ55_RS11825 78f9143afec6315ee38443c95aea4402 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 82 2.4E-20 T 06-07-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 11 386 44.972 T 06-07-2017 IPR019936 Mutatrotase, YjhT-like LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 Gene3D G3DSA:2.120.10.80 50 168 2.0E-28 T 06-07-2017 IPR015915 Kelch-type beta propeller GO:0005515 LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 Gene3D G3DSA:2.120.10.80 204 378 2.0E-28 T 06-07-2017 IPR015915 Kelch-type beta propeller GO:0005515 LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 Pfam PF01344 Kelch motif 89 132 3.9E-7 T 06-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 32 378 8.9E-150 T 06-07-2017 IPR019936 Mutatrotase, YjhT-like LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 SUPERFAMILY SSF117281 49 162 8.37E-30 T 06-07-2017 LFZ55_RS14845 9b45e10f2404aa497ff232c9f173f282 386 SUPERFAMILY SSF117281 197 373 8.37E-30 T 06-07-2017 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 Gene3D G3DSA:2.40.230.20 25 287 1.4E-101 T 06-07-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 90 111 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 116 136 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 151 176 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 233 252 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 263 286 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 183 206 2.2E-113 T 06-07-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 SUPERFAMILY SSF111364 32 287 6.28E-86 T 06-07-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LFZ55_RS18380 494daf04a0ca579222cd9316a21d6d96 287 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 287 7.8E-83 T 06-07-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LFZ55_RS19345 6f00bd00eb6d83f3df73d533cfed9abf 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-57 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 LFZ55_RS19345 6f00bd00eb6d83f3df73d533cfed9abf 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.544 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 LFZ55_RS19345 6f00bd00eb6d83f3df73d533cfed9abf 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 8.3E-57 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 LFZ55_RS22725 77077665c3e254df1930bf507e9920fe 230 PIRSF PIRSF006993 1 230 8.2E-117 T 06-07-2017 IPR016500 Uncharacterised conserved protein UCP006993 LFZ55_RS22725 77077665c3e254df1930bf507e9920fe 230 Pfam PF07356 Protein of unknown function (DUF1481) 42 226 3.3E-69 T 06-07-2017 IPR010858 Protein of unknown function DUF1481 LFZ55_RS22725 77077665c3e254df1930bf507e9920fe 230 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 3.8E-5 T 06-07-2017 IPR012640 Membrane lipoprotein, lipid attachment site LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 47.757 T 06-07-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 SMART SM00046 6 132 1.3E-28 T 06-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 8.3E-110 T 06-07-2017 IPR005218 Diacylglycerol/lipid kinase LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 9.6E-27 T 06-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 SUPERFAMILY SSF111331 7 296 9.81E-70 T 06-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain LFZ55_RS08570 cc0865e5944af13e4a0dfb4d9c8a10ac 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 1.9E-148 T 06-07-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LFZ55_RS08125 282665526ab19f2cce2fc4b66cce8dff 114 Pfam PF13989 YejG-like protein 4 108 4.9E-50 T 06-07-2017 IPR020489 Uncharacterised protein family YejG LFZ55_RS08125 282665526ab19f2cce2fc4b66cce8dff 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 1.0E-61 T 06-07-2017 IPR020489 Uncharacterised protein family YejG LFZ55_RS00165 256f3500cdacb8f1530773ef39ea4565 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 77 9.9E-13 T 06-07-2017 IPR010780 Protein of unknown function DUF1375 LFZ55_RS14200 d444c3f035d1848e6cacb55a124ae3b2 211 SUPERFAMILY SSF48498 96 206 3.86E-28 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LFZ55_RS14200 d444c3f035d1848e6cacb55a124ae3b2 211 SUPERFAMILY SSF46689 12 82 3.13E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14200 d444c3f035d1848e6cacb55a124ae3b2 211 Gene3D G3DSA:1.10.10.60 12 78 1.6E-24 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS14200 d444c3f035d1848e6cacb55a124ae3b2 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 6.4E-15 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LFZ55_RS14200 d444c3f035d1848e6cacb55a124ae3b2 211 Gene3D G3DSA:1.10.357.10 84 209 2.8E-41 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LFZ55_RS10790 45fc8d28dbd968f000af5c6695c040c0 99 Pfam PF05488 PAAR motif 24 88 1.8E-24 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS01505 d65f0b363b95375609aa0f2a947f6877 253 Pfam PF07090 Putative glutamine amidotransferase 9 250 4.8E-111 T 06-07-2017 IPR010768 Putative glutamine amidotransferase LFZ55_RS01505 d65f0b363b95375609aa0f2a947f6877 253 Gene3D G3DSA:3.40.50.880 7 252 3.8E-93 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS01505 d65f0b363b95375609aa0f2a947f6877 253 PIRSF PIRSF034405 6 253 9.8E-133 T 06-07-2017 IPR017027 Uncharacterised conserved protein UCP034405 LFZ55_RS01505 d65f0b363b95375609aa0f2a947f6877 253 SUPERFAMILY SSF52317 9 252 3.2E-74 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like LFZ55_RS04615 c6d78eda50020f1043fb3c79d01bcb85 260 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04615 c6d78eda50020f1043fb3c79d01bcb85 260 SUPERFAMILY SSF55120 2 239 6.72E-60 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS04615 c6d78eda50020f1043fb3c79d01bcb85 260 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.2E-29 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LFZ55_RS11625 0d3e13557e1a7e7821374cceff75e9c4 38 Pfam PF13683 Integrase core domain 3 25 2.4E-8 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 LFZ55_RS18765 9ea0d86205ef4f25d593b20b061fbd39 133 Pfam PF05932 Tir chaperone protein (CesT) family 8 125 8.1E-13 T 06-07-2017 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 LFZ55_RS18765 9ea0d86205ef4f25d593b20b061fbd39 133 Gene3D G3DSA:3.30.1460.10 44 126 1.1E-8 T 06-07-2017 LFZ55_RS18765 9ea0d86205ef4f25d593b20b061fbd39 133 Gene3D G3DSA:1.10.287.390 1 43 7.8E-21 T 06-07-2017 LFZ55_RS18765 9ea0d86205ef4f25d593b20b061fbd39 133 SUPERFAMILY SSF69635 6 129 8.24E-24 T 06-07-2017 LFZ55_RS11665 9c9fc3851f3bd95ff52ac8f85c902927 88 Pfam PF03891 Domain of unknown function (DUF333) 40 83 4.9E-14 T 06-07-2017 IPR005590 Protein of unknown function DUF333 LFZ55_RS15070 54f153d8d564b302d41a1ef91f3869b8 172 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 4 159 4.1E-48 T 06-07-2017 IPR018681 Protein of unknown function DUF2165, transmembrane LFZ55_RS24040 4e2b87ccb6e59642b777c750962bb949 147 SUPERFAMILY SSF52218 1 146 2.0E-37 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS24040 4e2b87ccb6e59642b777c750962bb949 147 Gene3D G3DSA:3.40.50.360 1 146 8.2E-34 T 06-07-2017 IPR029039 Flavoprotein-like domain LFZ55_RS24040 4e2b87ccb6e59642b777c750962bb949 147 Pfam PF00258 Flavodoxin 7 136 1.0E-23 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LFZ55_RS17785 b5f404d7e176bd3e7c90ebd0b7a53c80 198 SMART SM00421 131 188 3.7E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS17785 b5f404d7e176bd3e7c90ebd0b7a53c80 198 Gene3D G3DSA:1.10.10.10 134 187 1.1E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS17785 b5f404d7e176bd3e7c90ebd0b7a53c80 198 SUPERFAMILY SSF46894 124 188 4.76E-8 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS16025 75737958aa5acfd99f4a3f63cf9f6728 106 SUPERFAMILY SSF52794 5 98 2.07E-15 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS16025 75737958aa5acfd99f4a3f63cf9f6728 106 Gene3D G3DSA:3.40.50.270 6 97 2.2E-10 T 06-07-2017 LFZ55_RS16025 75737958aa5acfd99f4a3f63cf9f6728 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 90 3.1E-14 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS14985 9d6813d22a7920e85ccfbe928170d950 267 Gene3D G3DSA:3.90.850.10 1 267 2.9E-85 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS14985 9d6813d22a7920e85ccfbe928170d950 267 SUPERFAMILY SSF56529 2 267 3.66E-76 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS14985 9d6813d22a7920e85ccfbe928170d950 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.9E-139 T 06-07-2017 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 LFZ55_RS14985 9d6813d22a7920e85ccfbe928170d950 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 265 3.0E-6 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 Gene3D G3DSA:3.50.50.60 6 183 4.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 Gene3D G3DSA:3.50.50.60 268 354 4.9E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 SUPERFAMILY SSF51905 6 178 7.3E-63 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 SUPERFAMILY SSF51905 267 383 7.3E-63 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 Pfam PF01494 FAD binding domain 6 339 2.6E-28 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 1.2E-130 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 9.6E-18 T 06-07-2017 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 9.6E-18 T 06-07-2017 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 9.6E-18 T 06-07-2017 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 9.6E-18 T 06-07-2017 LFZ55_RS17255 5bf0d76d47571bb02284dbb60d81d2c9 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 06-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 SUPERFAMILY SSF56300 14 219 5.16E-46 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 PRINTS PR00114 Serine/threonine phosphatase family signature 45 72 6.9E-5 T 06-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 PRINTS PR00114 Serine/threonine phosphatase family signature 15 42 6.9E-5 T 06-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 73 78 - T 06-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 Pfam PF00149 Calcineurin-like phosphoesterase 15 189 1.5E-14 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LFZ55_RS15455 de71506c2ba5cda924f367b767c9a459 220 Gene3D G3DSA:3.60.21.10 9 219 7.2E-46 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like LFZ55_RS23485 5f268d29481cbc7d17c864d0cc1a0e9d 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 139 3.6E-49 T 06-07-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 LFZ55_RS23485 5f268d29481cbc7d17c864d0cc1a0e9d 174 Gene3D G3DSA:3.40.50.300 2 165 6.0E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23485 5f268d29481cbc7d17c864d0cc1a0e9d 174 SUPERFAMILY SSF52540 3 162 7.15E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS23485 5f268d29481cbc7d17c864d0cc1a0e9d 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 162 4.6E-50 T 06-07-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 LFZ55_RS16545 08d443d8f90a7333889a76fa30b66226 368 Pfam PF12698 ABC-2 family transporter protein 25 359 9.1E-48 T 06-07-2017 LFZ55_RS16545 08d443d8f90a7333889a76fa30b66226 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS16545 08d443d8f90a7333889a76fa30b66226 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS16545 08d443d8f90a7333889a76fa30b66226 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LFZ55_RS21625 3b968bd570a82c4237e56531626c7b09 102 SUPERFAMILY SSF52794 3 94 1.41E-17 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS21625 3b968bd570a82c4237e56531626c7b09 102 Gene3D G3DSA:3.40.50.270 4 92 1.3E-17 T 06-07-2017 LFZ55_RS21625 3b968bd570a82c4237e56531626c7b09 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 4.4E-14 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 SUPERFAMILY SSF53383 117 485 1.46E-68 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 SMART SM00345 18 77 1.3E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 Gene3D G3DSA:1.10.10.10 5 77 3.2E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 SUPERFAMILY SSF46785 7 81 6.3E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 Gene3D G3DSA:3.40.640.10 149 372 4.8E-56 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 Pfam PF00155 Aminotransferase class I and II 144 401 1.0E-15 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LFZ55_RS08180 58cd3b0c1e3ec3f8f76ae03fce9d25f4 492 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 6.7E-10 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LFZ55_RS13615 ce79105a3d2e2ec8dda6c3ffbf6a96c3 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 8.9E-16 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS13615 ce79105a3d2e2ec8dda6c3ffbf6a96c3 106 SUPERFAMILY SSF52794 4 102 6.02E-32 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LFZ55_RS13615 ce79105a3d2e2ec8dda6c3ffbf6a96c3 106 Gene3D G3DSA:3.40.50.270 1 103 1.2E-34 T 06-07-2017 LFZ55_RS13615 ce79105a3d2e2ec8dda6c3ffbf6a96c3 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 1.9E-33 T 06-07-2017 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 LFZ55_RS08540 2dcb3bbc24d84c219ad39751c9f2c92b 266 Gene3D G3DSA:3.40.1190.20 6 263 2.6E-100 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08540 2dcb3bbc24d84c219ad39751c9f2c92b 266 SUPERFAMILY SSF53613 5 265 3.74E-81 T 06-07-2017 IPR029056 Ribokinase-like LFZ55_RS08540 2dcb3bbc24d84c219ad39751c9f2c92b 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 7.0E-105 T 06-07-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LFZ55_RS08540 2dcb3bbc24d84c219ad39751c9f2c92b 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 9.8E-95 T 06-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 LFZ55_RS19255 ea8e15dd51455efe7ae3f3dab6a0037d 151 Pfam PF07977 FabA-like domain 17 141 2.8E-40 T 06-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS19255 ea8e15dd51455efe7ae3f3dab6a0037d 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.8E-60 T 06-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS19255 ea8e15dd51455efe7ae3f3dab6a0037d 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.474 T 06-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LFZ55_RS19255 ea8e15dd51455efe7ae3f3dab6a0037d 151 SUPERFAMILY SSF54637 10 149 1.01E-50 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS19255 ea8e15dd51455efe7ae3f3dab6a0037d 151 Gene3D G3DSA:3.10.129.10 4 147 7.3E-59 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS05740 ce4d89416486aa31f6c2abb80be5ae0c 112 Pfam PF04355 SmpA / OmlA family 35 104 1.0E-27 T 06-07-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LFZ55_RS05740 ce4d89416486aa31f6c2abb80be5ae0c 112 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.227 T 06-07-2017 IPR026592 Outer membrane protein assembly factor BamE LFZ55_RS22510 b4033266c5a8fb3b31c9d7af137917bf 122 Gene3D G3DSA:1.10.3830.10 3 121 1.1E-45 T 06-07-2017 LFZ55_RS22510 b4033266c5a8fb3b31c9d7af137917bf 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 06-07-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LFZ55_RS22510 b4033266c5a8fb3b31c9d7af137917bf 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.1E-34 T 06-07-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LFZ55_RS10795 f1296bfd8f9d8f0d39085c4c27994c72 597 Gene3D G3DSA:2.40.50.230 377 451 1.3E-13 T 06-07-2017 IPR006531 Gp5 N-terminal LFZ55_RS10795 f1296bfd8f9d8f0d39085c4c27994c72 597 SUPERFAMILY SSF69255 371 451 1.46E-17 T 06-07-2017 LFZ55_RS10795 f1296bfd8f9d8f0d39085c4c27994c72 597 SUPERFAMILY SSF69349 441 595 9.42E-5 T 06-07-2017 LFZ55_RS10795 f1296bfd8f9d8f0d39085c4c27994c72 597 SUPERFAMILY SSF69279 20 182 7.23E-14 T 06-07-2017 LFZ55_RS10795 f1296bfd8f9d8f0d39085c4c27994c72 597 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 72 495 9.2E-57 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LFZ55_RS21025 c6f9fb6c3b980ac033e8726e7e028cc4 305 Pfam PF12183 Restriction endonuclease NotI 13 222 1.8E-28 T 06-07-2017 IPR022009 Restriction endonuclease, type II, NotI LFZ55_RS01795 0a22da205f771d40e22897ac7c6de6c3 1833 SUPERFAMILY SSF103515 1594 1832 5.23E-21 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS01795 0a22da205f771d40e22897ac7c6de6c3 1833 Pfam PF03797 Autotransporter beta-domain 1574 1811 2.8E-27 T 06-07-2017 IPR005546 Autotransporter beta-domain LFZ55_RS14460 234749e706a61894e225bff8542ceeaf 81 Pfam PF06183 DinI-like family 14 78 2.3E-28 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS14460 234749e706a61894e225bff8542ceeaf 81 Gene3D G3DSA:3.30.910.10 1 80 6.0E-36 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS14460 234749e706a61894e225bff8542ceeaf 81 SUPERFAMILY SSF54857 1 80 1.57E-28 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like LFZ55_RS17160 125c5c664b096efc838db6b1f8a3cccc 110 Pfam PF13982 YbfN-like lipoprotein 21 107 6.8E-45 T 06-07-2017 IPR025727 YbfN-like lipoprotein LFZ55_RS02360 e308cd0c5e919c587bce2b96f547b0e3 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 3.6E-29 T 06-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 LFZ55_RS02360 e308cd0c5e919c587bce2b96f547b0e3 334 Gene3D G3DSA:3.90.420.10 67 331 3.0E-76 T 06-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 LFZ55_RS02360 e308cd0c5e919c587bce2b96f547b0e3 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 334 61.021 T 06-07-2017 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 LFZ55_RS02360 e308cd0c5e919c587bce2b96f547b0e3 334 SUPERFAMILY SSF56524 76 330 1.44E-93 T 06-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 LFZ55_RS21900 0a16bddd9293b521e2ea4fcf96420b74 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.1E-204 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS21900 0a16bddd9293b521e2ea4fcf96420b74 433 PIRSF PIRSF004539 1 433 3.4E-179 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS21900 0a16bddd9293b521e2ea4fcf96420b74 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 3.6E-144 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LFZ55_RS19975 ae8ae459af46a0474739cf8f66729b46 76 Pfam PF06004 Bacterial protein of unknown function (DUF903) 25 73 7.7E-19 T 06-07-2017 IPR010305 Protein of unknown function DUF903 LFZ55_RS19975 ae8ae459af46a0474739cf8f66729b46 76 Gene3D G3DSA:2.30.30.100 20 76 3.6E-29 T 06-07-2017 LFZ55_RS19975 ae8ae459af46a0474739cf8f66729b46 76 SUPERFAMILY SSF50182 22 74 3.49E-15 T 06-07-2017 IPR010920 LSM domain LFZ55_RS21655 1624b27f6f3888a0a19bdbfd530bb03e 106 SUPERFAMILY SSF159871 24 105 3.14E-20 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS21655 1624b27f6f3888a0a19bdbfd530bb03e 106 Gene3D G3DSA:3.30.1660.10 48 105 3.6E-15 T 06-07-2017 IPR025543 Dodecin-like LFZ55_RS21655 1624b27f6f3888a0a19bdbfd530bb03e 106 Pfam PF07338 Protein of unknown function (DUF1471) 50 105 2.0E-19 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 Gene3D G3DSA:3.40.30.10 2 108 3.5E-43 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 PIRSF PIRSF000077 2 108 4.8E-45 T 06-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.1E-39 T 06-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 Pfam PF00085 Thioredoxin 5 106 2.0E-34 T 06-07-2017 IPR013766 Thioredoxin domain GO:0045454 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 06-07-2017 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 06-07-2017 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 06-07-2017 LFZ55_RS23845 850143d49315e8891aad60bd107000ef 109 SUPERFAMILY SSF52833 2 108 1.04E-41 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 283 1.1E-24 T 06-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 SUPERFAMILY SSF56784 111 315 2.31E-47 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 Gene3D G3DSA:1.10.150.210 126 175 4.0E-28 T 06-07-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 147 280 7.8E-17 T 06-07-2017 LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 2.0E-92 T 06-07-2017 LFZ55_RS20415 acb64f9f21824708e8cbdde72d0e992c 322 Gene3D G3DSA:3.40.50.1000 176 301 9.2E-40 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00235 9d4f57a66e919d4580d2c1298945921c 286 SUPERFAMILY SSF103481 184 285 2.09E-12 T 06-07-2017 LFZ55_RS00235 9d4f57a66e919d4580d2c1298945921c 286 SUPERFAMILY SSF103481 49 144 2.75E-11 T 06-07-2017 LFZ55_RS00235 9d4f57a66e919d4580d2c1298945921c 286 Pfam PF00892 EamA-like transporter family 149 283 6.6E-13 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 SUPERFAMILY SSF143414 159 211 1.57E-5 T 06-07-2017 LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 1.1E-100 T 06-07-2017 IPR030983 Ethanolamine utilization protein EutL GO:0005198 LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 PIRSF PIRSF012290 1 219 4.3E-85 T 06-07-2017 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 Pfam PF00936 BMC domain 36 107 2.1E-11 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 Pfam PF00936 BMC domain 162 208 6.2E-6 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 SMART SM00877 35 132 7.7E-5 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06970 63e2dbe6150998ea887c928d1e0ca68b 219 SMART SM00877 146 215 3.7E-5 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS03420 316c82c72ea63d4801e9d91564674a50 219 Pfam PF09335 SNARE associated Golgi protein 48 173 1.1E-18 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS14850 745ded3b905cd2458679abbb4166a0ed 226 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.714 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 LFZ55_RS14850 745ded3b905cd2458679abbb4166a0ed 226 SUPERFAMILY SSF51366 13 224 1.13E-52 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LFZ55_RS14850 745ded3b905cd2458679abbb4166a0ed 226 Gene3D G3DSA:3.20.20.70 12 225 1.1E-88 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS14850 745ded3b905cd2458679abbb4166a0ed 226 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 2.3E-84 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 LFZ55_RS09340 e9cb9c588647ba9637184e16c380f8b7 405 Pfam PF07690 Major Facilitator Superfamily 15 355 6.8E-37 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS09340 e9cb9c588647ba9637184e16c380f8b7 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 2.9E-70 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LFZ55_RS09340 e9cb9c588647ba9637184e16c380f8b7 405 Gene3D G3DSA:1.20.1250.20 209 387 1.1E-11 T 06-07-2017 LFZ55_RS09340 e9cb9c588647ba9637184e16c380f8b7 405 Gene3D G3DSA:1.20.1250.20 10 193 8.9E-27 T 06-07-2017 LFZ55_RS09340 e9cb9c588647ba9637184e16c380f8b7 405 SUPERFAMILY SSF103473 7 387 2.75E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS09510 3718a9381c0817c9136e2fe3c14cba4d 82 Pfam PF10781 Dextransucrase DSRB 19 78 1.4E-35 T 06-07-2017 IPR019717 Dextransucrase DSRB LFZ55_RS09510 3718a9381c0817c9136e2fe3c14cba4d 82 Hamap MF_01549 Protein DsrB [dsrB]. 19 80 29.548 T 06-07-2017 IPR019717 Dextransucrase DSRB LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 PIRSF PIRSF004681 1 138 2.1E-41 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 138 4.5E-46 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 Gene3D G3DSA:2.60.120.460 1 138 1.9E-52 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 4.3E-34 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS22435 06023064e7c8f17b706f87855e2dfd33 138 SUPERFAMILY SSF111038 1 138 2.75E-45 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 LFZ55_RS15135 506dec2797a4215b592dee1a0207d41c 403 Pfam PF07690 Major Facilitator Superfamily 20 336 1.1E-16 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS15135 506dec2797a4215b592dee1a0207d41c 403 SUPERFAMILY SSF103473 10 395 1.16E-26 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS15135 506dec2797a4215b592dee1a0207d41c 403 Gene3D G3DSA:1.20.1250.20 17 210 2.7E-16 T 06-07-2017 LFZ55_RS15135 506dec2797a4215b592dee1a0207d41c 403 Gene3D G3DSA:1.20.1250.20 223 393 4.8E-5 T 06-07-2017 LFZ55_RS12460 2fd9586385ee7e7fc25c04eeb0562911 363 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 25 347 2.0E-42 T 06-07-2017 IPR029132 Choloylglycine hydrolase/NAAA C-terminal LFZ55_RS12460 2fd9586385ee7e7fc25c04eeb0562911 363 Gene3D G3DSA:3.60.60.10 25 354 3.3E-88 T 06-07-2017 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 LFZ55_RS12460 2fd9586385ee7e7fc25c04eeb0562911 363 SUPERFAMILY SSF56235 25 354 7.48E-79 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS00630 71e24f79c1f1ca45f4d3fee41b682b70 374 Gene3D G3DSA:3.40.50.2000 154 349 4.2E-19 T 06-07-2017 LFZ55_RS00630 71e24f79c1f1ca45f4d3fee41b682b70 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 4.7E-9 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS00630 71e24f79c1f1ca45f4d3fee41b682b70 374 SUPERFAMILY SSF53756 2 354 4.28E-63 T 06-07-2017 LFZ55_RS00630 71e24f79c1f1ca45f4d3fee41b682b70 374 Pfam PF00534 Glycosyl transferases group 1 184 349 2.5E-34 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS01415 4edf2eb0395bceeef12e8e2ec909077d 351 Pfam PF02687 FtsX-like permease family 227 341 9.9E-12 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LFZ55_RS01415 4edf2eb0395bceeef12e8e2ec909077d 351 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 45 350 7.6E-156 T 06-07-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 LFZ55_RS01415 4edf2eb0395bceeef12e8e2ec909077d 351 PIRSF PIRSF003097 49 347 2.2E-108 T 06-07-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 LFZ55_RS16185 cf56140f3f66136318790a06db1adb8a 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 7.7E-61 T 06-07-2017 IPR019708 Bacteriophage HP1, Orf24 LFZ55_RS22735 58ee1a8996005567a56fb854e64bd1af 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 5.1E-82 T 06-07-2017 IPR007338 Protein of unknown function DUF416 LFZ55_RS22735 58ee1a8996005567a56fb854e64bd1af 196 Gene3D G3DSA:1.20.1590.10 1 193 3.1E-92 T 06-07-2017 IPR023381 YP001051499.1-like domain LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 PIRSF PIRSF000388 1 263 3.0E-97 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 42.204 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 Gene3D G3DSA:3.20.20.60 1 263 1.2E-109 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 6.4E-105 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 SUPERFAMILY SSF51621 4 262 3.56E-104 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LFZ55_RS19455 ed74246cbad532bab12a86bb61f02abc 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 2.7E-125 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 LFZ55_RS07710 af127450d96f50a1ad5f2398b53fb37c 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 4.3E-30 T 06-07-2017 IPR010279 Protein of unknown function DUF883, ElaB LFZ55_RS08285 8f373eff65837c69bac529bcddb6e015 129 SMART SM00530 18 68 1.2E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS08285 8f373eff65837c69bac529bcddb6e015 129 Gene3D G3DSA:1.10.260.40 6 67 7.8E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS08285 8f373eff65837c69bac529bcddb6e015 129 Pfam PF01381 Helix-turn-helix 19 66 2.0E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LFZ55_RS08285 8f373eff65837c69bac529bcddb6e015 129 SUPERFAMILY SSF47413 7 66 3.26E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 4.1E-30 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 6.6E-35 T 06-07-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.3E-25 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.3E-25 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.3E-25 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS09525 7e7a55f14b0a63323e8f6c06c13197e6 89 PIRSF PIRSF004669 1 89 1.3E-33 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 8.7E-166 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 Pfam PF00923 Transaldolase 14 313 2.3E-103 T 06-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 SUPERFAMILY SSF51569 1 316 2.93E-118 T 06-07-2017 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.2 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 LFZ55_RS20295 5378e7909acc579b8e8ab97310f0f83b 317 Gene3D G3DSA:3.20.20.70 3 315 3.1E-136 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS24555 125ae031f82632d579153c21b908ae81 541 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 31 539 3.4E-119 T 06-07-2017 IPR013359 Pilus formation type IVB, outer membrane PilN LFZ55_RS24555 125ae031f82632d579153c21b908ae81 541 Pfam PF07655 Secretin N-terminal domain 182 266 4.5E-10 T 06-07-2017 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 LFZ55_RS24555 125ae031f82632d579153c21b908ae81 541 Pfam PF00263 Bacterial type II and III secretion system protein 370 540 5.0E-14 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 LFZ55_RS13740 1cf7a734b695323fc6c63948e2db9310 92 Pfam PF07023 Protein of unknown function (DUF1315) 5 80 5.7E-28 T 06-07-2017 IPR009749 Protein of unknown function DUF1315 LFZ55_RS18270 ef1de4047217eebb4967a2b472caef62 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 2.8E-19 T 06-07-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 LFZ55_RS18270 ef1de4047217eebb4967a2b472caef62 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 1.5E-38 T 06-07-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 LFZ55_RS13480 2d790dabd360c5cdba6b246e8f839d3f 46 Pfam PF01848 Hok/gef family 14 44 6.3E-6 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 LFZ55_RS08050 56328855b2ec59c03c08a1ee14ddff86 275 SUPERFAMILY SSF46785 8 79 4.08E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS08050 56328855b2ec59c03c08a1ee14ddff86 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.5E-11 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LFZ55_RS08050 56328855b2ec59c03c08a1ee14ddff86 275 Gene3D G3DSA:1.10.10.10 7 83 1.6E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22925 b1d32b683233271bff8acfc661e41f1b 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 3.8E-54 T 06-07-2017 IPR009867 Protein of unknown function DUF1422 LFZ55_RS22925 b1d32b683233271bff8acfc661e41f1b 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 4.0E-63 T 06-07-2017 IPR009867 Protein of unknown function DUF1422 LFZ55_RS06845 b78bc133cda58fe4893fd58024734c2d 484 Pfam PF05488 PAAR motif 10 71 1.2E-12 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS20540 d09cdb94012cae5f4d01dcb5840634be 152 SUPERFAMILY SSF55826 4 152 3.79E-41 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS20540 d09cdb94012cae5f4d01dcb5840634be 152 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 3.9E-29 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS20540 d09cdb94012cae5f4d01dcb5840634be 152 Gene3D G3DSA:3.90.960.10 1 152 1.5E-49 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS01965 746c892afa837044a8d360e439a9c9d7 240 Pfam PF08348 YheO-like PAS domain 29 137 3.0E-35 T 06-07-2017 IPR013559 YheO-like LFZ55_RS01965 746c892afa837044a8d360e439a9c9d7 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 4.0E-69 T 06-07-2017 IPR013559 YheO-like LFZ55_RS01965 746c892afa837044a8d360e439a9c9d7 240 Pfam PF13309 HTH domain 171 228 2.9E-19 T 06-07-2017 LFZ55_RS02425 ad0c3032e63fc0ecf83b0b14827fde51 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.531 T 06-07-2017 IPR012451 Protein of unknown function DUF1656 LFZ55_RS02425 ad0c3032e63fc0ecf83b0b14827fde51 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 4.9E-20 T 06-07-2017 IPR012451 Protein of unknown function DUF1656 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 SUPERFAMILY SSF111369 46 215 1.44E-21 T 06-07-2017 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 Pfam PF13437 HlyD family secretion protein 156 251 4.1E-10 T 06-07-2017 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 Pfam PF13533 Biotin-lipoyl like 47 95 7.0E-18 T 06-07-2017 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 61.053 T 06-07-2017 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 243 8.2E-32 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 Gene3D G3DSA:2.40.50.100 47 80 5.2E-17 T 06-07-2017 LFZ55_RS02430 36ba294c89f9efaa4bbf0aa9c8f69751 310 Gene3D G3DSA:2.40.50.100 154 187 5.2E-17 T 06-07-2017 LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 SUPERFAMILY SSF52402 4 154 9.21E-26 T 06-07-2017 LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 Gene3D G3DSA:3.40.50.620 143 303 9.2E-31 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 SUPERFAMILY SSF52402 155 307 1.26E-24 T 06-07-2017 LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 Pfam PF00582 Universal stress protein family 3 146 1.1E-18 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 Pfam PF00582 Universal stress protein family 174 300 1.1E-14 T 06-07-2017 IPR006016 UspA GO:0006950 LFZ55_RS11575 73ca668e72b04cea1eb19c5fc086cbd8 315 Gene3D G3DSA:3.40.50.620 1 142 2.5E-22 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS09505 2bd5f0804e25a92a64caa232eeb9c7a3 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 1.4E-32 T 06-07-2017 IPR019669 Uncharacterised bacterial stress protein YodD LFZ55_RS16205 3a99187f02dc7fb2ea2cb633a67dec7a 167 Pfam PF05926 Phage head completion protein (GPL) 31 166 6.7E-43 T 06-07-2017 IPR009225 Bacteriophage head completion protein GpL GO:0019069 LFZ55_RS08765 4dccad40fa60475ec1a2d3498142d92b 406 Pfam PF00534 Glycosyl transferases group 1 213 371 1.0E-40 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 LFZ55_RS08765 4dccad40fa60475ec1a2d3498142d92b 406 SUPERFAMILY SSF53756 15 404 1.26E-57 T 06-07-2017 LFZ55_RS08765 4dccad40fa60475ec1a2d3498142d92b 406 Gene3D G3DSA:3.40.50.2000 223 376 1.3E-23 T 06-07-2017 LFZ55_RS08765 4dccad40fa60475ec1a2d3498142d92b 406 Pfam PF13439 Glycosyltransferase Family 4 15 210 1.6E-7 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LFZ55_RS08765 4dccad40fa60475ec1a2d3498142d92b 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 1.5E-264 T 06-07-2017 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL LFZ55_RS19035 5521161ca83a600ba313a4b62c8c506d 255 SUPERFAMILY SSF56235 2 253 5.95E-52 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS19035 5521161ca83a600ba313a4b62c8c506d 255 Gene3D G3DSA:3.60.20.10 1 248 1.6E-67 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS19035 5521161ca83a600ba313a4b62c8c506d 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 4.4E-114 T 06-07-2017 IPR026869 Putative glutamine amidotransferase type 2 LFZ55_RS16420 9ea129a445b2563e2fc457b5d9af64d8 433 Pfam PF07690 Major Facilitator Superfamily 30 390 6.7E-56 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS16420 9ea129a445b2563e2fc457b5d9af64d8 433 SUPERFAMILY SSF103473 13 431 2.49E-78 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS16420 9ea129a445b2563e2fc457b5d9af64d8 433 Gene3D G3DSA:1.20.1250.20 19 212 5.9E-47 T 06-07-2017 LFZ55_RS16420 9ea129a445b2563e2fc457b5d9af64d8 433 Gene3D G3DSA:1.20.1250.20 234 431 2.0E-21 T 06-07-2017 LFZ55_RS20235 46045a3f0eb92231fa8b7e505b6d058b 147 SUPERFAMILY SSF46894 9 101 8.22E-7 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20235 46045a3f0eb92231fa8b7e505b6d058b 147 Gene3D G3DSA:1.10.10.10 22 101 1.3E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20235 46045a3f0eb92231fa8b7e505b6d058b 147 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 99 4.2E-5 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LFZ55_RS03890 abf9bf2aaea309efa83b772d1e5cb66f 43 Pfam PF11036 Virulence promoting factor 1 43 2.7E-33 T 06-07-2017 IPR020196 Uncharacterised protein family YqgB LFZ55_RS03890 abf9bf2aaea309efa83b772d1e5cb66f 43 ProDom PD050163 YQGB INNER MEMBRANE STY3241 1 42 4.0E-17 T 06-07-2017 IPR020196 Uncharacterised protein family YqgB LFZ55_RS14045 9a9cb6a68fe0b61a9a0615ad412218ac 133 Gene3D G3DSA:2.60.120.380 40 130 9.7E-5 T 06-07-2017 LFZ55_RS14045 9a9cb6a68fe0b61a9a0615ad412218ac 133 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 48 111 2.0E-6 T 06-07-2017 IPR007280 Peptidase, C-terminal, archaeal/bacterial LFZ55_RS05135 743064f2de9ea470a7887a1fa741a4d3 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.7E-98 T 06-07-2017 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 LFZ55_RS05135 743064f2de9ea470a7887a1fa741a4d3 290 SUPERFAMILY SSF52540 88 286 5.07E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS05135 743064f2de9ea470a7887a1fa741a4d3 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 8.6E-35 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LFZ55_RS05135 743064f2de9ea470a7887a1fa741a4d3 290 Gene3D G3DSA:3.40.50.300 112 270 7.1E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS16090 720576bf77fb7e3373c31daa1f55b457 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 117 1.0E-49 T 06-07-2017 IPR020368 Uncharacterised protein family YbjM GO:0016021 LFZ55_RS16090 720576bf77fb7e3373c31daa1f55b457 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 117 3.3E-46 T 06-07-2017 IPR020368 Uncharacterised protein family YbjM GO:0016021 LFZ55_RS13370 b6a13b67c654b9677ebd5245f8fc7f39 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 6.8E-69 T 06-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LFZ55_RS13370 b6a13b67c654b9677ebd5245f8fc7f39 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 2.1E-194 T 06-07-2017 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 LFZ55_RS13370 b6a13b67c654b9677ebd5245f8fc7f39 495 SUPERFAMILY SSF101960 41 86 2.48E-137 T 06-07-2017 LFZ55_RS13370 b6a13b67c654b9677ebd5245f8fc7f39 495 SUPERFAMILY SSF101960 125 492 2.48E-137 T 06-07-2017 LFZ55_RS13225 38256f8e99dd4b3f87b24d2ea572f856 485 Pfam PF04888 Secretion system effector C (SseC) like family 94 479 4.5E-68 T 06-07-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 LFZ55_RS22190 d1c6e2f5fd6353230274e1ad93b5bc21 355 PIRSF PIRSF007313 1 355 5.1E-156 T 06-07-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 LFZ55_RS22190 d1c6e2f5fd6353230274e1ad93b5bc21 355 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.9E-152 T 06-07-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 LFZ55_RS16230 b5f3cab88155bdd176a7a6fa569818c4 353 Pfam PF04860 Phage portal protein 94 343 2.9E-13 T 06-07-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein LFZ55_RS16230 b5f3cab88155bdd176a7a6fa569818c4 353 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 53 332 7.0E-66 T 06-07-2017 IPR006430 Phage portal protein PBSX family LFZ55_RS16230 b5f3cab88155bdd176a7a6fa569818c4 353 PIRSF PIRSF018494 1 348 6.4E-147 T 06-07-2017 IPR030935 Phage portal protein PBSX family, Proteobacteria LFZ55_RS16555 74e267082382030369a93035593b88ad 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 14 243 1.6E-19 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS16555 74e267082382030369a93035593b88ad 252 Gene3D G3DSA:3.60.10.10 3 250 1.8E-21 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS16555 74e267082382030369a93035593b88ad 252 SUPERFAMILY SSF56219 7 250 7.33E-53 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase LFZ55_RS24340 0e758b1f536bed37df8f332c9a6fe7ab 121 SUPERFAMILY SSF47413 61 119 3.44E-5 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS24340 0e758b1f536bed37df8f332c9a6fe7ab 121 Gene3D G3DSA:1.10.260.40 46 118 7.2E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LFZ55_RS08305 51c903b9441e937655579af39b185cc0 380 Pfam PF04235 Protein of unknown function (DUF418) 215 374 2.0E-44 T 06-07-2017 IPR007349 Domain of unknown function DUF418 LFZ55_RS05355 175b29d644c10c8e32d532aa517cc7f0 331 Gene3D G3DSA:3.40.190.100 113 263 1.4E-54 T 06-07-2017 LFZ55_RS05355 175b29d644c10c8e32d532aa517cc7f0 331 SUPERFAMILY SSF53850 24 329 1.05E-91 T 06-07-2017 LFZ55_RS05355 175b29d644c10c8e32d532aa517cc7f0 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 304 5.0E-53 T 06-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LFZ55_RS05355 175b29d644c10c8e32d532aa517cc7f0 331 Gene3D G3DSA:3.40.190.10 264 330 3.9E-57 T 06-07-2017 LFZ55_RS05355 175b29d644c10c8e32d532aa517cc7f0 331 Gene3D G3DSA:3.40.190.10 23 112 3.9E-57 T 06-07-2017 LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 SUPERFAMILY SSF51998 64 126 3.07E-24 T 06-07-2017 LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 Gene3D G3DSA:3.20.70.20 61 126 2.5E-34 T 06-07-2017 LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 2.9E-70 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 Pfam PF01228 Glycine radical 16 108 6.5E-23 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 PIRSF PIRSF000378 2 127 5.8E-56 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA LFZ55_RS05930 bc8c77d4154fbdced977f20e4cab8ed1 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.504 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA LFZ55_RS13955 f80b2a8680e90557905f7f4995c19bd5 324 Gene3D G3DSA:1.10.3720.10 93 311 1.5E-13 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS13955 f80b2a8680e90557905f7f4995c19bd5 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 319 3.0E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS13955 f80b2a8680e90557905f7f4995c19bd5 324 SUPERFAMILY SSF161098 93 307 5.07E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS01740 4bf87f2e8a878d8c51faa259b0c56d1f 133 Pfam PF10748 Protein of unknown function (DUF2531) 4 133 2.1E-68 T 06-07-2017 IPR019684 Protein of unknown function DUF2531 LFZ55_RS07400 af393b3f66ae7fedaeb0da3f50b64a34 333 PIRSF PIRSF020588 1 333 8.1E-168 T 06-07-2017 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 LFZ55_RS16325 878f9940c558853e7229dddf273980c4 202 SMART SM00014 61 169 1.3E-26 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS16325 878f9940c558853e7229dddf273980c4 202 Pfam PF01569 PAP2 superfamily 63 169 1.2E-12 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS16325 878f9940c558853e7229dddf273980c4 202 Gene3D G3DSA:1.20.144.10 3 173 5.8E-25 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS16325 878f9940c558853e7229dddf273980c4 202 SUPERFAMILY SSF48317 2 200 1.57E-38 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LFZ55_RS22500 7f18cc4bd8bd7b544c4748fe0f94aa3d 441 Pfam PF01554 MatE 241 380 7.2E-9 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS22500 7f18cc4bd8bd7b544c4748fe0f94aa3d 441 Pfam PF01554 MatE 17 177 1.1E-30 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS22500 7f18cc4bd8bd7b544c4748fe0f94aa3d 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 1.6E-93 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LFZ55_RS24795 47a73319a38bcfc3ad3372904df0917e 246 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 24 246 9.1E-121 T 06-07-2017 IPR014125 Type-F conjugative transfer system pilin acetylase TraX LFZ55_RS24795 47a73319a38bcfc3ad3372904df0917e 246 Pfam PF05857 TraX protein 30 245 4.4E-47 T 06-07-2017 IPR008875 TraX LFZ55_RS09040 d089b15f3d88b929a9c571c40674694b 224 Pfam PF02288 Dehydratase medium subunit 69 181 1.0E-34 T 06-07-2017 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor LFZ55_RS09040 d089b15f3d88b929a9c571c40674694b 224 PIRSF PIRSF018506 1 224 3.1E-111 T 06-07-2017 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 LFZ55_RS09040 d089b15f3d88b929a9c571c40674694b 224 SUPERFAMILY SSF52968 47 224 2.75E-72 T 06-07-2017 IPR010254 B12-dependent dehydratases, beta subunit LFZ55_RS09040 d089b15f3d88b929a9c571c40674694b 224 Gene3D G3DSA:3.40.50.10150 47 223 2.0E-89 T 06-07-2017 IPR010254 B12-dependent dehydratases, beta subunit LFZ55_RS01160 781c1f47269bbbc756adfc4b4e8862c2 342 Pfam PF03631 Virulence factor BrkB 71 330 4.7E-49 T 06-07-2017 IPR017039 Virulence factor BrkB LFZ55_RS01160 781c1f47269bbbc756adfc4b4e8862c2 342 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 57 331 4.9E-129 T 06-07-2017 IPR005274 Inner membrane protein YhjD LFZ55_RS10360 07685a8aca805822042d2cd8251cafe9 206 Pfam PF02659 Putative manganese efflux pump 49 200 1.1E-52 T 06-07-2017 IPR003810 Putative manganese efflux pump LFZ55_RS10360 07685a8aca805822042d2cd8251cafe9 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 19 203 25.64 T 06-07-2017 IPR022929 Putative manganese efflux pump MntP LFZ55_RS08590 a494520b1a4a193b358e2abcff0c2f0a 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS08590 a494520b1a4a193b358e2abcff0c2f0a 453 Pfam PF01136 Peptidase family U32 75 343 6.4E-97 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS08590 a494520b1a4a193b358e2abcff0c2f0a 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.0E-21 T 06-07-2017 IPR032525 Peptidase family U32, C-terminal LFZ55_RS24955 8c9274e4c9af19a8325ecc69f24dbe1d 120 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 23 120 2.4E-41 T 06-07-2017 IPR008873 TraA GO:0000746|GO:0005576 LFZ55_RS24955 8c9274e4c9af19a8325ecc69f24dbe1d 120 Pfam PF05513 TraA 1 118 7.2E-66 T 06-07-2017 IPR008873 TraA GO:0000746|GO:0005576 LFZ55_RS21870 ab1921c6c973dee288e02dea0906095d 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 1.2E-31 T 06-07-2017 IPR025294 Protein of unknown function DUF4156 LFZ55_RS07010 bd67acebb25339f1b2fe6244ebbcbf92 299 SUPERFAMILY SSF54909 1 296 1.34E-89 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel LFZ55_RS07010 bd67acebb25339f1b2fe6244ebbcbf92 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.6E-96 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 LFZ55_RS07010 bd67acebb25339f1b2fe6244ebbcbf92 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 1.1E-88 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 LFZ55_RS24990 dda931f706c17eeb6471f18bcceb4932 129 Pfam PF07128 Protein of unknown function (DUF1380) 1 111 2.9E-52 T 06-07-2017 IPR009811 Protein of unknown function DUF1380 LFZ55_RS10065 8cd8785ac4154d576a24498b88817587 124 Gene3D G3DSA:2.60.40.1220 26 124 2.3E-32 T 06-07-2017 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like LFZ55_RS10065 8cd8785ac4154d576a24498b88817587 124 Pfam PF04234 CopC domain 27 123 7.0E-27 T 06-07-2017 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 LFZ55_RS10065 8cd8785ac4154d576a24498b88817587 124 SUPERFAMILY SSF81296 26 124 1.47E-27 T 06-07-2017 IPR014756 Immunoglobulin E-set LFZ55_RS24865 feb6ee975d83b5ba9f49bc1c9d393d7d 608 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 314 558 6.5E-83 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN LFZ55_RS24865 feb6ee975d83b5ba9f49bc1c9d393d7d 608 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 4 599 4.4E-211 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN LFZ55_RS07325 4879f9f8d9b2982196dafd2b2ad53313 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 4.8E-7 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LFZ55_RS07325 4879f9f8d9b2982196dafd2b2ad53313 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 7.0E-60 T 06-07-2017 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 LFZ55_RS07325 4879f9f8d9b2982196dafd2b2ad53313 161 SUPERFAMILY SSF53254 1 143 1.09E-18 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS07325 4879f9f8d9b2982196dafd2b2ad53313 161 Gene3D G3DSA:3.40.50.1240 1 157 6.8E-43 T 06-07-2017 IPR029033 Histidine phosphatase superfamily LFZ55_RS13015 414d3cb1fc8422ff7c89cca26d543c71 173 Gene3D G3DSA:2.60.40.200 23 173 2.4E-45 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13015 414d3cb1fc8422ff7c89cca26d543c71 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 06-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13015 414d3cb1fc8422ff7c89cca26d543c71 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 172 1.8E-29 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS13015 414d3cb1fc8422ff7c89cca26d543c71 173 SUPERFAMILY SSF49329 23 173 2.36E-46 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 LFZ55_RS02340 bb0e14dc285ec17b536626aa2137f9b2 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.0E-32 T 06-07-2017 IPR010398 Protein of unknown function DUF997 LFZ55_RS02340 bb0e14dc285ec17b536626aa2137f9b2 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 6.0E-40 T 06-07-2017 IPR010398 Protein of unknown function DUF997 LFZ55_RS21405 b7c92f95545b3e5408af884027897373 450 SUPERFAMILY SSF111283 17 449 6.93E-131 T 06-07-2017 LFZ55_RS21405 b7c92f95545b3e5408af884027897373 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 6.7E-55 T 06-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 LFZ55_RS20600 84bd14e7be92ab7498a7b51cbd43d0be 67 Pfam PF04328 Protein of unknown function (DUF466) 5 67 3.9E-28 T 06-07-2017 IPR007423 Protein of unknown function DUF466 LFZ55_RS03795 35415e6635827c067044997cca721ec0 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 236 8.4E-40 T 06-07-2017 IPR021307 Protein of unknown function DUF2884 LFZ55_RS03250 1c3e9d6ecd4b5c110f1231871152b0c3 433 Gene3D G3DSA:2.40.320.10 1 210 9.8E-46 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LFZ55_RS03250 1c3e9d6ecd4b5c110f1231871152b0c3 433 Pfam PF01928 CYTH domain 3 196 1.1E-37 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LFZ55_RS03250 1c3e9d6ecd4b5c110f1231871152b0c3 433 SUPERFAMILY SSF55154 1 216 6.87E-52 T 06-07-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 LFZ55_RS03250 1c3e9d6ecd4b5c110f1231871152b0c3 433 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 4 88 0.004 T 06-07-2017 LFZ55_RS03250 1c3e9d6ecd4b5c110f1231871152b0c3 433 SMART SM01118 2 202 1.1E-41 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LFZ55_RS09770 ca800e71e7a2c62b57785331bcf0f8d7 167 SUPERFAMILY SSF47240 5 158 4.74E-37 T 06-07-2017 IPR009078 Ferritin-like superfamily LFZ55_RS09770 ca800e71e7a2c62b57785331bcf0f8d7 167 Pfam PF00210 Ferritin-like domain 8 142 1.2E-23 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LFZ55_RS09770 ca800e71e7a2c62b57785331bcf0f8d7 167 Gene3D G3DSA:1.20.1260.10 4 162 3.8E-39 T 06-07-2017 IPR012347 Ferritin-related LFZ55_RS24610 a9ecd0ad9146b0be3be96795ea446aa8 53 SUPERFAMILY SSF50199 2 46 3.92E-5 T 06-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LFZ55_RS15430 5c283ba52b20b47a7a9c0267e04bb6e4 116 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 11 107 2.5E-39 T 06-07-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system LFZ55_RS13010 ece1ad7d1fa0c2b2debcd5287290b013 679 Pfam PF04632 Fusaric acid resistance protein family 20 663 2.0E-171 T 06-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LFZ55_RS18730 585802a1a02e0b4bb7ae95604d593ccd 302 SUPERFAMILY SSF103481 187 287 2.88E-5 T 06-07-2017 LFZ55_RS18730 585802a1a02e0b4bb7ae95604d593ccd 302 SUPERFAMILY SSF103481 40 140 1.01E-14 T 06-07-2017 LFZ55_RS18730 585802a1a02e0b4bb7ae95604d593ccd 302 Pfam PF00892 EamA-like transporter family 7 138 1.8E-27 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS18730 585802a1a02e0b4bb7ae95604d593ccd 302 Pfam PF00892 EamA-like transporter family 152 286 3.0E-21 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LFZ55_RS16975 d04450b7b29c59c017c4adebead1c451 592 Gene3D G3DSA:3.90.550.10 131 237 1.5E-5 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS16975 d04450b7b29c59c017c4adebead1c451 592 SUPERFAMILY SSF53448 150 357 1.41E-15 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS16975 d04450b7b29c59c017c4adebead1c451 592 Pfam PF13641 Glycosyltransferase like family 2 148 354 4.5E-8 T 06-07-2017 LFZ55_RS20760 67e3ba3c9e038a7c4ea6e7becfdd420f 344 Pfam PF07470 Glycosyl Hydrolase Family 88 37 343 4.3E-69 T 06-07-2017 IPR010905 Glycosyl hydrolase, family 88 LFZ55_RS20760 67e3ba3c9e038a7c4ea6e7becfdd420f 344 SUPERFAMILY SSF48208 5 343 1.81E-45 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS20760 67e3ba3c9e038a7c4ea6e7becfdd420f 344 Gene3D G3DSA:1.50.10.10 2 343 7.3E-77 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS09465 101f4f73c4d50c146ff368177f16312b 231 SMART SM00471 22 141 1.4E-8 T 06-07-2017 IPR003607 HD/PDEase domain LFZ55_RS09465 101f4f73c4d50c146ff368177f16312b 231 Gene3D G3DSA:1.10.3210.10 6 145 5.2E-39 T 06-07-2017 IPR006674 HD domain LFZ55_RS09465 101f4f73c4d50c146ff368177f16312b 231 Gene3D G3DSA:1.10.3210.10 184 214 5.2E-39 T 06-07-2017 IPR006674 HD domain LFZ55_RS09465 101f4f73c4d50c146ff368177f16312b 231 SUPERFAMILY SSF109604 4 215 3.43E-59 T 06-07-2017 LFZ55_RS09465 101f4f73c4d50c146ff368177f16312b 231 Pfam PF01966 HD domain 29 131 3.2E-10 T 06-07-2017 IPR006674 HD domain LFZ55_RS03305 2258e615e37b60d3b7d8bc9a5f34efed 387 SUPERFAMILY SSF52440 174 279 4.03E-39 T 06-07-2017 IPR016185 Pre-ATP-grasp domain LFZ55_RS03305 2258e615e37b60d3b7d8bc9a5f34efed 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 5.4E-162 T 06-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain LFZ55_RS03305 2258e615e37b60d3b7d8bc9a5f34efed 387 SUPERFAMILY SSF56059 1 168 2.12E-94 T 06-07-2017 LFZ55_RS03305 2258e615e37b60d3b7d8bc9a5f34efed 387 SUPERFAMILY SSF56059 266 383 2.12E-94 T 06-07-2017 LFZ55_RS19980 28d13e45ad668ce0ba2cec3990494343 446 Pfam PF00083 Sugar (and other) transporter 28 432 2.3E-49 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LFZ55_RS19980 28d13e45ad668ce0ba2cec3990494343 446 Gene3D G3DSA:1.20.1250.20 17 200 2.4E-28 T 06-07-2017 LFZ55_RS19980 28d13e45ad668ce0ba2cec3990494343 446 Gene3D G3DSA:1.20.1250.20 243 426 4.5E-18 T 06-07-2017 LFZ55_RS19980 28d13e45ad668ce0ba2cec3990494343 446 SUPERFAMILY SSF103473 6 429 3.01E-75 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS07990 cc69ea9f41266bc00f98fc6251e48ca1 349 Gene3D G3DSA:1.25.40.10 219 263 3.6E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS07990 cc69ea9f41266bc00f98fc6251e48ca1 349 Gene3D G3DSA:1.25.40.10 264 344 2.3E-23 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS07990 cc69ea9f41266bc00f98fc6251e48ca1 349 SUPERFAMILY SSF48452 222 328 8.71E-16 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LFZ55_RS07990 cc69ea9f41266bc00f98fc6251e48ca1 349 Pfam PF03918 Cytochrome C biogenesis protein 11 132 1.7E-49 T 06-07-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family LFZ55_RS07990 cc69ea9f41266bc00f98fc6251e48ca1 349 Pfam PF14559 Tetratricopeptide repeat 237 304 4.5E-7 T 06-07-2017 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 3.3E-171 T 06-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.693 T 06-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 SUPERFAMILY SSF53067 66 111 9.71E-27 T 06-07-2017 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 SUPERFAMILY SSF53067 6 36 9.71E-27 T 06-07-2017 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 SUPERFAMILY SSF53067 143 341 9.71E-27 T 06-07-2017 LFZ55_RS12985 543300cec1ea9224d63e2efca8c056f4 373 Gene3D G3DSA:3.30.420.40 5 196 1.1E-72 T 06-07-2017 LFZ55_RS05750 7236c01fadcf9ed0cfc413c19b163164 292 Gene3D G3DSA:3.40.50.10330 1 149 1.1E-40 T 06-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LFZ55_RS05750 7236c01fadcf9ed0cfc413c19b163164 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.092 T 06-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LFZ55_RS05750 7236c01fadcf9ed0cfc413c19b163164 292 Gene3D G3DSA:2.60.200.30 150 261 2.7E-42 T 06-07-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LFZ55_RS05750 7236c01fadcf9ed0cfc413c19b163164 292 Pfam PF01513 ATP-NAD kinase 8 271 1.8E-78 T 06-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LFZ55_RS05750 7236c01fadcf9ed0cfc413c19b163164 292 SUPERFAMILY SSF111331 7 289 5.89E-92 T 06-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain LFZ55_RS17025 c8c358a4ac52213254a20f7e091746e8 249 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.426 T 06-07-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LFZ55_RS17025 c8c358a4ac52213254a20f7e091746e8 249 Pfam PF03746 LamB/YcsF family 3 234 3.1E-91 T 06-07-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LFZ55_RS17025 c8c358a4ac52213254a20f7e091746e8 249 SUPERFAMILY SSF88713 1 242 3.26E-90 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LFZ55_RS09875 0e4790e8aa9919082420c1eac221ce22 130 Pfam PF06366 Flagellar protein FlhE 28 130 6.5E-39 T 06-07-2017 IPR009420 Flagellar protein FlhE LFZ55_RS21475 05278c1a05c74e38bec78e0ac6dd08d6 176 SUPERFAMILY SSF50324 4 173 8.9E-67 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 LFZ55_RS21475 05278c1a05c74e38bec78e0ac6dd08d6 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.972 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 LFZ55_RS21475 05278c1a05c74e38bec78e0ac6dd08d6 176 Gene3D G3DSA:3.90.80.10 5 175 7.6E-61 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 LFZ55_RS21475 05278c1a05c74e38bec78e0ac6dd08d6 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 LFZ55_RS21475 05278c1a05c74e38bec78e0ac6dd08d6 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 5.7E-54 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 LFZ55_RS08800 37812ee6a2e4ba045d4514f44f95b128 321 Pfam PF07507 WavE lipopolysaccharide synthesis 7 309 2.7E-55 T 06-07-2017 IPR011122 WavE lipopolysaccharide synthesis LFZ55_RS16350 b1e2d7a2379121c6b7a0aead2021d52a 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 124 2.0E-58 T 06-07-2017 IPR020359 Biofilm regulator BssR LFZ55_RS16350 b1e2d7a2379121c6b7a0aead2021d52a 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 3.2E-76 T 06-07-2017 IPR020359 Biofilm regulator BssR LFZ55_RS20550 a4585705ca25ccdde540858b2154f917 241 SMART SM00421 152 209 1.4E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20550 a4585705ca25ccdde540858b2154f917 241 Gene3D G3DSA:1.10.10.10 127 210 4.0E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20550 a4585705ca25ccdde540858b2154f917 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 5.8E-10 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LFZ55_RS20550 a4585705ca25ccdde540858b2154f917 241 SUPERFAMILY SSF46894 150 210 3.16E-12 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LFZ55_RS20275 b7ec57f6e455f0039fd745d65a7a1d22 237 Pfam PF03981 Ubiquinol-cytochrome C chaperone 58 220 8.0E-22 T 06-07-2017 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 LFZ55_RS20275 b7ec57f6e455f0039fd745d65a7a1d22 237 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 2.7E-17 T 06-07-2017 IPR025217 Domain of unknown function DUF3944 LFZ55_RS20850 d5202138a58a54f848cfa0b57de974e8 494 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 30 295 8.4E-116 T 06-07-2017 IPR022304 Integrating conjugative element, PFGI-1, ParB LFZ55_RS20850 d5202138a58a54f848cfa0b57de974e8 494 Gene3D G3DSA:3.90.1530.10 34 103 6.0E-7 T 06-07-2017 LFZ55_RS20850 d5202138a58a54f848cfa0b57de974e8 494 Gene3D G3DSA:1.10.10.10 171 198 2.8E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS20850 d5202138a58a54f848cfa0b57de974e8 494 SUPERFAMILY SSF110849 39 166 3.14E-10 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS20850 d5202138a58a54f848cfa0b57de974e8 494 Pfam PF02195 ParB-like nuclease domain 40 99 7.8E-6 T 06-07-2017 IPR003115 ParB/Sulfiredoxin LFZ55_RS18440 80670890710cef18d96ce530835d1c54 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 1.5E-160 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LFZ55_RS18440 80670890710cef18d96ce530835d1c54 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 6.7E-163 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LFZ55_RS00455 c0441b8b1b24ca36a29ab751be63cf4b 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 5.6E-19 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 50.393 T 06-07-2017 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 SUPERFAMILY SSF103473 9 406 7.32E-32 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 Gene3D G3DSA:1.20.1250.20 206 406 5.8E-19 T 06-07-2017 LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.4E-182 T 06-07-2017 LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 9.9E-218 T 06-07-2017 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 LFZ55_RS03760 f1deb26354c4251bf5a45dbb5266d4d3 418 Gene3D G3DSA:1.20.1250.20 6 181 7.9E-8 T 06-07-2017 LFZ55_RS03270 7e2d8ffa1be228591917b426ca0b84b3 118 Pfam PF04380 Membrane fusogenic activity 21 98 6.7E-29 T 06-07-2017 IPR007475 Membrane fusogenic activity LFZ55_RS20800 f1aecc471685b872728045855bfe559b 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.373 T 06-07-2017 IPR018654 Putative toxin of bacterial toxin-antitoxin pair LFZ55_RS20800 f1aecc471685b872728045855bfe559b 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 1.5E-40 T 06-07-2017 IPR018654 Putative toxin of bacterial toxin-antitoxin pair LFZ55_RS16040 c9f6d4fdc60f7149af6edccd50232104 157 Pfam PF10767 Protein of unknown function (DUF2593) 16 155 2.1E-62 T 06-07-2017 IPR019703 Protein of unknown function DUF2593 LFZ55_RS24265 83c9f472a764827d94272915a32a65af 226 Pfam PF16816 DotD protein 72 150 1.7E-17 T 06-07-2017 IPR031817 DotD protein LFZ55_RS11690 8575d2737e4b89ec6277208a28dc3871 107 PIRSF PIRSF025560 1 107 1.7E-43 T 06-07-2017 IPR008309 Uncharacterised conserved protein UCP025560 LFZ55_RS11690 8575d2737e4b89ec6277208a28dc3871 107 Pfam PF07027 Protein of unknown function (DUF1318) 19 107 1.3E-30 T 06-07-2017 IPR008309 Uncharacterised conserved protein UCP025560 LFZ55_RS11770 48f3c8b2a4d5a076737fd980e883766f 228 Pfam PF07108 PipA protein 25 224 1.5E-128 T 06-07-2017 IPR010777 PipA LFZ55_RS00780 42066f0f436c6699bc795416cf4844fa 69 Gene3D G3DSA:1.20.58.250 15 63 6.3E-11 T 06-07-2017 IPR011326 Homologue of theta DNA polymerase III LFZ55_RS00780 42066f0f436c6699bc795416cf4844fa 69 SUPERFAMILY SSF46575 15 60 4.97E-6 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LFZ55_RS20305 f377790d3e4c54ef91f9e4775c8133f7 257 Pfam PF03883 Protein of unknown function (DUF328) 1 242 2.5E-92 T 06-07-2017 IPR005583 Peroxide stress protein YaaA LFZ55_RS20305 f377790d3e4c54ef91f9e4775c8133f7 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.926 T 06-07-2017 IPR005583 Peroxide stress protein YaaA LFZ55_RS12165 0cf2637f5299f791cc02fed2a6a4dd18 218 Pfam PF01292 Prokaryotic cytochrome b561 12 186 2.9E-19 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LFZ55_RS12165 0cf2637f5299f791cc02fed2a6a4dd18 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 8.1E-70 T 06-07-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 LFZ55_RS12165 0cf2637f5299f791cc02fed2a6a4dd18 218 Gene3D G3DSA:1.20.950.20 1 215 1.3E-75 T 06-07-2017 LFZ55_RS12165 0cf2637f5299f791cc02fed2a6a4dd18 218 SUPERFAMILY SSF81342 3 212 1.49E-54 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 LFZ55_RS03400 e2de2921b9dc7b321967b42177adafaf 484 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 30 478 2.7E-116 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS03400 e2de2921b9dc7b321967b42177adafaf 484 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 483 3.9E-134 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS03400 e2de2921b9dc7b321967b42177adafaf 484 PIRSF PIRSF002457 1 484 5.6E-155 T 06-07-2017 IPR030676 Citrate carrier CitT-related LFZ55_RS14710 d5e9c4956603f5d80f0493ff8c496a95 346 Pfam PF13503 Domain of unknown function (DUF4123) 83 178 2.0E-8 T 06-07-2017 IPR025391 Domain of unknown function DUF4123 LFZ55_RS08900 d5bf86dd009924dcaea75d3ab35c8923 274 Gene3D G3DSA:3.40.50.720 97 195 1.4E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08900 d5bf86dd009924dcaea75d3ab35c8923 274 Gene3D G3DSA:3.90.25.10 196 265 1.3E-4 T 06-07-2017 LFZ55_RS08900 d5bf86dd009924dcaea75d3ab35c8923 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 4.7E-9 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LFZ55_RS08900 d5bf86dd009924dcaea75d3ab35c8923 274 SUPERFAMILY SSF51735 2 266 3.62E-31 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08900 d5bf86dd009924dcaea75d3ab35c8923 274 Gene3D G3DSA:3.40.50.720 2 96 2.6E-9 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 Gene3D G3DSA:3.90.79.10 7 146 3.1E-32 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 SUPERFAMILY SSF55811 2 147 4.33E-30 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 Pfam PF00293 NUDIX domain 23 141 5.8E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 Hamap MF_00941 GDP-mannose mannosyl hydrolase [gmm]. 1 155 48.635 T 06-07-2017 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria GO:0000287|GO:0008727|GO:0030145 LFZ55_RS08730 b11d7f1fa204ffe212cc8fc8bbe4137f 157 PIRSF PIRSF037599 1 152 4.7E-72 T 06-07-2017 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 LFZ55_RS05095 e414e231bb6b84aadf82a38c1ae8000a 286 SUPERFAMILY SSF81345 3 260 1.29E-38 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS05095 e414e231bb6b84aadf82a38c1ae8000a 286 Pfam PF00950 ABC 3 transport family 10 264 1.6E-80 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 LFZ55_RS05095 e414e231bb6b84aadf82a38c1ae8000a 286 Gene3D G3DSA:1.10.3470.10 61 263 1.5E-11 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS07585 b9666c8d1df76d35116ec61d87855573 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.3E-58 T 06-07-2017 IPR007334 Uncharacterised protein family UPF0208 LFZ55_RS07585 b9666c8d1df76d35116ec61d87855573 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 37.044 T 06-07-2017 IPR007334 Uncharacterised protein family UPF0208 LFZ55_RS14230 6bea491b275c997c91d57cc37f5ee81a 212 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 210 34.448 T 06-07-2017 IPR014094 Penicillin-binding protein activator LpoB LFZ55_RS14230 6bea491b275c997c91d57cc37f5ee81a 212 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 209 2.5E-55 T 06-07-2017 IPR014094 Penicillin-binding protein activator LpoB LFZ55_RS14230 6bea491b275c997c91d57cc37f5ee81a 212 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 211 2.8E-60 T 06-07-2017 IPR014094 Penicillin-binding protein activator LpoB LFZ55_RS10580 343da7c4171763406b937c360e5e2ecc 514 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.4E-176 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LFZ55_RS24640 50e04508c6b61f2c961e28a389e9c507 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 5.2E-26 T 06-07-2017 IPR009956 Post-segregation antitoxin CcdA LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 211 5.7E-4 T 06-07-2017 LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.2E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 Gene3D G3DSA:3.40.50.720 5 247 1.3E-68 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 SUPERFAMILY SSF51735 10 244 3.32E-64 T 06-07-2017 IPR016040 NAD(P)-binding domain LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LFZ55_RS11185 dc2162796af617917f7967d7c3ed512f 253 Pfam PF00106 short chain dehydrogenase 14 209 1.9E-53 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LFZ55_RS08345 c3adf58a3a30326e6bd900e4bdec74c3 81 Pfam PF10808 Protein of unknown function (DUF2542) 3 81 4.3E-46 T 06-07-2017 IPR020155 Uncharacterised protein family YeiS GO:0016021 LFZ55_RS08345 c3adf58a3a30326e6bd900e4bdec74c3 81 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 3 81 2.0E-33 T 06-07-2017 IPR020155 Uncharacterised protein family YeiS GO:0016021 LFZ55_RS21045 05056c344fa6cc4b13c7503e3edd5d77 310 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 21 307 1.1E-120 T 06-07-2017 IPR026331 Integrating conjugative element protein PFL_4710 LFZ55_RS21045 05056c344fa6cc4b13c7503e3edd5d77 310 Pfam PF06834 TraU protein 28 298 1.6E-65 T 06-07-2017 IPR009649 TraU LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.2E-64 T 06-07-2017 IPR023798 Ribosomal protein S7 domain LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 Gene3D G3DSA:1.10.455.10 8 156 4.9E-67 T 06-07-2017 IPR023798 Ribosomal protein S7 domain LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.21 T 06-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 PIRSF PIRSF002122 3 156 3.7E-63 T 06-07-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 SUPERFAMILY SSF47973 6 149 7.72E-60 T 06-07-2017 IPR023798 Ribosomal protein S7 domain LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 06-07-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LFZ55_RS01990 b072295c50ca6968ff5c830de33e728d 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.0E-71 T 06-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LFZ55_RS19575 765191ffc52b68357f74a28ebc94833d 263 Pfam PF11453 Protein of unknown function (DUF2950) 20 261 6.0E-79 T 06-07-2017 IPR021556 Protein of unknown function DUF2950 LFZ55_RS24700 ae2ec7badead7a9af1c83e555d819af7 197 Gene3D G3DSA:2.60.40.1090 29 149 1.3E-4 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS14585 8c9a5e0cf466d6b9956833ac06b85e69 176 Pfam PF06496 Protein of unknown function (DUF1097) 24 158 9.5E-39 T 06-07-2017 IPR009476 Protein of unknown function DUF1097 LFZ55_RS11850 be333dc7ceada4062cb9d780c23f4e9f 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 2.5E-121 T 06-07-2017 IPR009770 Domain of unknown function DUF1338 LFZ55_RS11850 be333dc7ceada4062cb9d780c23f4e9f 447 SMART SM01150 11 401 3.7E-227 T 06-07-2017 IPR009770 Domain of unknown function DUF1338 LFZ55_RS00775 6da54326f6f1d35ae0a70cdc5dc319ff 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 3.5E-33 T 06-07-2017 IPR021230 Protein of unknown function DUF2810 LFZ55_RS05360 7325199acf35f3611b0fb3a4cfef298b 354 SUPERFAMILY SSF161098 142 324 2.22E-43 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS05360 7325199acf35f3611b0fb3a4cfef298b 354 Gene3D G3DSA:1.10.3720.10 140 325 3.6E-43 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS05360 7325199acf35f3611b0fb3a4cfef298b 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 7.0E-26 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS00065 ebc16207147ec158cc1cff5ac85a6587 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 1.5E-95 T 06-07-2017 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 LFZ55_RS05415 eda2531a54f1dda36817077445d93db9 116 SUPERFAMILY SSF159894 1 111 2.09E-59 T 06-07-2017 LFZ55_RS05415 eda2531a54f1dda36817077445d93db9 116 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.9E-59 T 06-07-2017 IPR018994 Protein of unknown function DUF2002 LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 Gene3D G3DSA:3.40.50.620 193 509 7.7E-120 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 SUPERFAMILY SSF52402 210 479 2.62E-75 T 06-07-2017 LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 Pfam PF00733 Asparagine synthase 212 366 9.7E-59 T 06-07-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 Pfam PF00733 Asparagine synthase 367 511 4.7E-42 T 06-07-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.0E-41 T 06-07-2017 IPR017932 Glutamine amidotransferase type 2 domain LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 9.8E-126 T 06-07-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 Gene3D G3DSA:3.60.20.10 1 192 4.5E-67 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS17210 e05e32892f490c65a4333c6d38907ae3 554 SUPERFAMILY SSF56235 1 196 1.03E-56 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LFZ55_RS14435 3d1f5d9622674a60c7eb8e159ae253d5 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.6E-19 T 06-07-2017 IPR000182 GNAT domain GO:0008080 LFZ55_RS14435 3d1f5d9622674a60c7eb8e159ae253d5 194 Gene3D G3DSA:3.40.630.30 9 186 2.2E-46 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS14435 3d1f5d9622674a60c7eb8e159ae253d5 194 SUPERFAMILY SSF55729 12 185 2.75E-42 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS22615 7f42b7e44fbe014a003678d640e2ff0d 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.5E-57 T 06-07-2017 IPR018636 Protein of unknown function DUF2058 LFZ55_RS22615 7f42b7e44fbe014a003678d640e2ff0d 179 Gene3D G3DSA:1.10.3030.10 87 150 9.2E-4 T 06-07-2017 IPR015299 Gamete antigen, Plasmodium species LFZ55_RS10995 1fe0ea30376a8299853ef62eda46feaf 301 Pfam PF01734 Patatin-like phospholipase 8 165 1.0E-23 T 06-07-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LFZ55_RS10995 1fe0ea30376a8299853ef62eda46feaf 301 SUPERFAMILY SSF52151 1 296 1.27E-59 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LFZ55_RS10995 1fe0ea30376a8299853ef62eda46feaf 301 Gene3D G3DSA:3.40.1090.10 8 197 2.0E-5 T 06-07-2017 LFZ55_RS10995 1fe0ea30376a8299853ef62eda46feaf 301 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 06-07-2017 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 LFZ55_RS12535 f225390a105edd06b586f3c239e99034 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 4.9E-51 T 06-07-2017 IPR020378 Protein of unknown function DUF4186 LFZ55_RS12535 f225390a105edd06b586f3c239e99034 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 8.0E-62 T 06-07-2017 IPR020378 Protein of unknown function DUF4186 LFZ55_RS20865 115c0f82990b51df626c3bc19a2ca6a5 249 Pfam PF13391 HNH endonuclease 165 211 1.5E-7 T 06-07-2017 IPR003615 HNH nuclease LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 PIRSF PIRSF002808 5 450 3.9E-43 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 Gene3D G3DSA:1.20.1250.20 245 443 2.5E-33 T 06-07-2017 LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 SUPERFAMILY SSF103473 12 444 3.79E-82 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 Gene3D G3DSA:1.20.1250.20 14 214 2.3E-45 T 06-07-2017 LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 8.6E-160 T 06-07-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS04630 269556d208fd6332a23a6c868762e9eb 452 Pfam PF07690 Major Facilitator Superfamily 25 318 2.0E-48 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS20860 41baf0f52734fbfdbe2b91c21f0394f0 377 Pfam PF13730 Helix-turn-helix domain 51 111 3.0E-6 T 06-07-2017 LFZ55_RS03905 73908a6fec4b95a1a56e85dbb38bc726 252 Gene3D G3DSA:3.30.2010.10 65 145 4.4E-24 T 06-07-2017 LFZ55_RS03905 73908a6fec4b95a1a56e85dbb38bc726 252 Pfam PF01435 Peptidase family M48 72 245 1.4E-25 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LFZ55_RS24680 5e3fa13dc0e40b84d4fe196f77876a9c 70 Gene3D G3DSA:1.10.10.10 3 70 9.0E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS24680 5e3fa13dc0e40b84d4fe196f77876a9c 70 Pfam PF04703 FaeA-like protein 1 70 2.7E-19 T 06-07-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 LFZ55_RS24680 5e3fa13dc0e40b84d4fe196f77876a9c 70 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 13 69 3.0E-7 T 06-07-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 LFZ55_RS24830 714107d5592b249bcb34241ee6cb74dd 940 Pfam PF07916 TraG-like protein, N-terminal region 3 444 1.3E-118 T 06-07-2017 IPR012931 TraG-like, N-terminal LFZ55_RS01860 6ad122da438fbb0bc1dc70441382e873 134 Gene3D G3DSA:2.20.25.10 1 34 3.8E-19 T 06-07-2017 LFZ55_RS01860 6ad122da438fbb0bc1dc70441382e873 134 Pfam PF02566 OsmC-like protein 30 127 1.6E-19 T 06-07-2017 IPR003718 OsmC/Ohr family LFZ55_RS01860 6ad122da438fbb0bc1dc70441382e873 134 Gene3D G3DSA:3.30.300.20 35 132 2.5E-43 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta LFZ55_RS01860 6ad122da438fbb0bc1dc70441382e873 134 SUPERFAMILY SSF82784 1 131 1.23E-43 T 06-07-2017 IPR003718 OsmC/Ohr family LFZ55_RS05155 568e1a574d5e1490942242b7a99c13e9 608 Pfam PF00361 Proton-conducting membrane transporter 124 401 3.2E-37 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS11400 09bb22b1d9a211eaae6432872b50673f 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.3E-31 T 06-07-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 LFZ55_RS11400 09bb22b1d9a211eaae6432872b50673f 74 Pfam PF06667 Phage shock protein B 3 73 9.6E-31 T 06-07-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 LFZ55_RS23395 44199ffe103a15b3b592fd9eae936d32 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 230 3.5E-82 T 06-07-2017 IPR009331 Oligogalacturonate-specific porin LFZ55_RS23395 44199ffe103a15b3b592fd9eae936d32 230 SUPERFAMILY SSF56935 20 230 7.32E-5 T 06-07-2017 LFZ55_RS23395 44199ffe103a15b3b592fd9eae936d32 230 Gene3D G3DSA:2.40.230.30 23 230 4.5E-58 T 06-07-2017 LFZ55_RS10605 38d07a53ce0777e2f46cdcbbe4d0d7ad 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS10605 38d07a53ce0777e2f46cdcbbe4d0d7ad 597 SUPERFAMILY SSF56762 12 582 1.44E-166 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10605 38d07a53ce0777e2f46cdcbbe4d0d7ad 597 Gene3D G3DSA:1.10.645.10 15 582 8.9E-224 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS10605 38d07a53ce0777e2f46cdcbbe4d0d7ad 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 5.0E-220 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 LFZ55_RS10605 38d07a53ce0777e2f46cdcbbe4d0d7ad 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 LFZ55_RS17690 11ee192ff449c7b196f8683603e069c6 439 Pfam PF02378 Phosphotransferase system, EIIC 32 365 2.0E-46 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LFZ55_RS17690 11ee192ff449c7b196f8683603e069c6 439 PIRSF PIRSF006351 4 439 4.7E-137 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LFZ55_RS17690 11ee192ff449c7b196f8683603e069c6 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 436 3.4E-100 T 06-07-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LFZ55_RS03055 c888a98dd890f4f8519e1bc86aa1b758 161 Pfam PF07681 DoxX 39 118 3.8E-18 T 06-07-2017 IPR032808 DoxX family LFZ55_RS11360 4f8166be1043dbb897287c2a7acd9f9e 86 Pfam PF15284 Phage-encoded virulence factor 10 83 6.1E-11 T 06-07-2017 IPR029335 Phage-encoded virulence factor LFZ55_RS13835 d34a15f8e0caf99c56462caddfa79e67 83 Pfam PF03891 Domain of unknown function (DUF333) 31 77 6.8E-19 T 06-07-2017 IPR005590 Protein of unknown function DUF333 LFZ55_RS04440 2d65507d02f792cea259bbb100bab670 156 SUPERFAMILY SSF54523 8 148 1.26E-7 T 06-07-2017 LFZ55_RS04440 2d65507d02f792cea259bbb100bab670 156 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 1.3E-6 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS04440 2d65507d02f792cea259bbb100bab670 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site LFZ55_RS01725 1e7fec2689e129e6c24261e2664160d6 259 SUPERFAMILY SSF53067 28 164 6.99E-5 T 06-07-2017 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 SUPERFAMILY SSF109604 339 499 9.42E-16 T 06-07-2017 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 Gene3D G3DSA:1.10.730.10 582 678 2.0E-4 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 Pfam PF05746 DALR anticodon binding domain 582 679 3.9E-8 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.1E-37 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.1E-37 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-37 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.1E-37 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-37 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 2.3E-213 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS00940 24a3d19e184ca277353ccef2acd622fd 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.906 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LFZ55_RS11465 7e591dabc5caccc12866178633b7ce19 301 Gene3D G3DSA:2.40.160.40 22 301 1.3E-119 T 06-07-2017 LFZ55_RS11465 7e591dabc5caccc12866178633b7ce19 301 Pfam PF09381 Outer membrane protein G (OmpG) 1 301 1.4E-179 T 06-07-2017 IPR018981 Outer membrane protein G LFZ55_RS15200 a29b84a69ae41ace8f6e64048627318d 61 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 8 32 9.6E-6 T 06-07-2017 IPR013575 Initiation factor 2 associated domain, bacterial LFZ55_RS00505 235f4220a22897d9e19d9b45a8c32270 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LFZ55_RS00505 235f4220a22897d9e19d9b45a8c32270 463 Pfam PF00860 Permease family 34 427 7.2E-111 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS00505 235f4220a22897d9e19d9b45a8c32270 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 4.0E-142 T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LFZ55_RS00980 1d481fbbd8c4caed2626b80cdb66af7d 176 Pfam PF10908 Protein of unknown function (DUF2778) 24 155 1.1E-27 T 06-07-2017 IPR021225 Protein of unknown function DUF2778 LFZ55_RS14235 7a1aec0c665b8d9ae5115d9db79df7fd 124 Pfam PF07233 Protein of unknown function (DUF1425) 33 123 4.5E-27 T 06-07-2017 IPR010824 Protein of unknown function DUF1425 LFZ55_RS05890 d22414a522b341870da30aeaacba9465 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 99 1.3E-9 T 06-07-2017 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein LFZ55_RS05890 d22414a522b341870da30aeaacba9465 107 PIRSF PIRSF034456 1 106 6.3E-60 T 06-07-2017 IPR017028 Uncharacterised conserved protein UCP034456 LFZ55_RS15515 4ce826fb923f85440c2f3fab849c1895 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 26.179 T 06-07-2017 IPR018635 Uncharacterised protein family UPF0319 LFZ55_RS15515 4ce826fb923f85440c2f3fab849c1895 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 4.2E-45 T 06-07-2017 IPR018635 Uncharacterised protein family UPF0319 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 Gene3D G3DSA:3.40.50.150 14 272 1.2E-73 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02315 e623f01756572e302083db15f812200f 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 3.1E-37 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 214 232 3.1E-37 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 68 88 3.1E-37 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 195 212 3.1E-37 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 257 3.1E-37 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 SUPERFAMILY SSF53335 15 256 2.33E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS02315 e623f01756572e302083db15f812200f 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LFZ55_RS02315 e623f01756572e302083db15f812200f 294 Pfam PF01555 DNA methylase 34 251 2.3E-53 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 LFZ55_RS16675 9f50c056bfe36b109efcef26d1785875 427 Pfam PF01095 Pectinesterase 193 339 2.0E-11 T 06-07-2017 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 LFZ55_RS16675 9f50c056bfe36b109efcef26d1785875 427 Gene3D G3DSA:2.160.20.10 77 421 2.1E-66 T 06-07-2017 IPR012334 Pectin lyase fold LFZ55_RS16675 9f50c056bfe36b109efcef26d1785875 427 SUPERFAMILY SSF51126 407 421 1.21E-35 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS16675 9f50c056bfe36b109efcef26d1785875 427 SUPERFAMILY SSF51126 75 155 1.21E-35 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS16675 9f50c056bfe36b109efcef26d1785875 427 SUPERFAMILY SSF51126 192 376 1.21E-35 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor LFZ55_RS03635 1c5014fe8d942de9e00c6259fb71b79c 185 Pfam PF11354 Protein of unknown function (DUF3156) 17 174 1.5E-61 T 06-07-2017 IPR021500 Protein of unknown function DUF3156 LFZ55_RS18375 e1b27847504918a8d274334d61739046 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 176 1.9E-77 T 06-07-2017 IPR021658 Domain of unknown function DUF3251 LFZ55_RS18375 e1b27847504918a8d274334d61739046 179 Gene3D G3DSA:2.60.40.1620 43 177 3.2E-65 T 06-07-2017 IPR021658 Domain of unknown function DUF3251 LFZ55_RS20715 da8f7b239bfa529be20eecd548346db7 221 Gene3D G3DSA:3.40.50.1820 24 211 2.0E-21 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS20715 da8f7b239bfa529be20eecd548346db7 221 Pfam PF01738 Dienelactone hydrolase family 26 212 1.2E-17 T 06-07-2017 IPR002925 Dienelactone hydrolase GO:0016787 LFZ55_RS20715 da8f7b239bfa529be20eecd548346db7 221 SUPERFAMILY SSF53474 23 211 1.42E-22 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 376 7.1E-84 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 SUPERFAMILY SSF111369 52 300 7.85E-89 T 06-07-2017 LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 4.0E-12 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 110 361 4.8E-10 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 Gene3D G3DSA:2.40.50.100 173 208 6.5E-24 T 06-07-2017 LFZ55_RS18080 c996a0ceb0f80ade9cc19252d1965b0c 397 Gene3D G3DSA:2.40.50.100 65 98 6.5E-24 T 06-07-2017 LFZ55_RS24920 4af21877c2e7f55b1ffa3686e5253a06 171 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 2 165 1.9E-51 T 06-07-2017 IPR014118 Type IV conjugative transfer system protein TraV LFZ55_RS24920 4af21877c2e7f55b1ffa3686e5253a06 171 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 165 2.1E-33 T 06-07-2017 IPR014118 Type IV conjugative transfer system protein TraV LFZ55_RS04295 05e183fb4c3315a676b17c48684f4e61 281 Pfam PF03824 High-affinity nickel-transport protein 14 279 5.7E-54 T 06-07-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LFZ55_RS02535 f4c6dc42a5e4a2327bbc294601c68a11 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.5E-60 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS02535 f4c6dc42a5e4a2327bbc294601c68a11 155 SUPERFAMILY SSF51197 1 153 1.65E-41 T 06-07-2017 LFZ55_RS02535 f4c6dc42a5e4a2327bbc294601c68a11 155 Gene3D G3DSA:2.60.120.370 1 152 2.1E-47 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS02535 f4c6dc42a5e4a2327bbc294601c68a11 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 6.7E-39 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family LFZ55_RS11725 d0c0e38f4fe65318eea94eeb2bc852d8 513 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 234 6.9E-16 T 06-07-2017 LFZ55_RS03675 76d73101236eadde3d10855b3af7a879 144 Gene3D G3DSA:3.10.180.10 25 143 2.6E-34 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS03675 76d73101236eadde3d10855b3af7a879 144 SUPERFAMILY SSF54593 19 143 2.15E-24 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LFZ55_RS03675 76d73101236eadde3d10855b3af7a879 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 140 2.5E-11 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LFZ55_RS04795 7642e8cbfb48118c9e230f6c9af6bb30 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.308 T 06-07-2017 IPR023081 Cell division protein FtsB LFZ55_RS04795 7642e8cbfb48118c9e230f6c9af6bb30 103 Pfam PF04977 Septum formation initiator 11 89 4.7E-31 T 06-07-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 LFZ55_RS12915 84772ef0aaaea18a3757ea53adc47573 146 Pfam PF10754 Protein of unknown function (DUF2569) 6 144 2.2E-41 T 06-07-2017 IPR019690 Protein of unknown function DUF2569 LFZ55_RS21490 752a1f6b9097be10516c28ecc03b5c4a 577 Gene3D G3DSA:2.40.160.50 304 574 1.5E-21 T 06-07-2017 LFZ55_RS21490 752a1f6b9097be10516c28ecc03b5c4a 577 Pfam PF01103 Surface antigen 281 574 7.0E-32 T 06-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 LFZ55_RS21490 752a1f6b9097be10516c28ecc03b5c4a 577 Pfam PF07244 Surface antigen variable number repeat 189 251 1.8E-8 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 LFZ55_RS08380 5a410f6c04e9b218371358d4aa896ace 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 230 6.5E-49 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS08380 5a410f6c04e9b218371358d4aa896ace 233 SUPERFAMILY SSF56529 23 233 2.88E-65 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS08380 5a410f6c04e9b218371358d4aa896ace 233 Gene3D G3DSA:3.90.850.10 23 233 8.1E-75 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LFZ55_RS04380 8c84b1b3ba9a5419afd61d5a2f98da18 398 Gene3D G3DSA:1.20.1250.20 17 186 7.5E-11 T 06-07-2017 LFZ55_RS04380 8c84b1b3ba9a5419afd61d5a2f98da18 398 Pfam PF07690 Major Facilitator Superfamily 20 349 4.0E-13 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS04380 8c84b1b3ba9a5419afd61d5a2f98da18 398 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.354 T 06-07-2017 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 LFZ55_RS04380 8c84b1b3ba9a5419afd61d5a2f98da18 398 SUPERFAMILY SSF103473 14 395 5.1E-21 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 PIRSF PIRSF000437 19 806 0.0 T 06-07-2017 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 803 33.452 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 Pfam PF01553 Acyltransferase 282 424 3.8E-26 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 PIRSF PIRSF500064 2 806 0.0 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 SUPERFAMILY SSF69593 246 485 1.7E-23 T 06-07-2017 LFZ55_RS22515 78b1ea0f609e20dbe77d4a89ed9c98e5 806 SMART SM00563 300 427 7.8E-28 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LFZ55_RS14495 f71643e16dbd4047a8d4bbe92f78513a 306 PIRSF PIRSF026649 2 306 1.2E-102 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS14495 f71643e16dbd4047a8d4bbe92f78513a 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 8.2E-144 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 LFZ55_RS14495 f71643e16dbd4047a8d4bbe92f78513a 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.369 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 LFZ55_RS14495 f71643e16dbd4047a8d4bbe92f78513a 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 2.5E-113 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LFZ55_RS23790 1d0bf9b5a8d80f1b88b4212ff3908eb6 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.765 T 06-07-2017 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 LFZ55_RS23790 1d0bf9b5a8d80f1b88b4212ff3908eb6 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 8.6E-9 T 06-07-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LFZ55_RS13000 fca636205a218156d822c4edc063654e 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 2.9E-15 T 06-07-2017 IPR012451 Protein of unknown function DUF1656 LFZ55_RS12200 74c86fe8c831ef7836261caf1039dd24 305 Pfam PF06109 Haemolysin E (HlyE) 16 295 3.3E-117 T 06-07-2017 IPR027018 Hemolysin E GO:0009405|GO:0044179 LFZ55_RS12200 74c86fe8c831ef7836261caf1039dd24 305 Gene3D G3DSA:1.20.1170.10 1 305 1.2E-198 T 06-07-2017 LFZ55_RS12200 74c86fe8c831ef7836261caf1039dd24 305 SUPERFAMILY SSF58100 1 299 1.83E-175 T 06-07-2017 LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 Gene3D G3DSA:3.20.20.80 610 684 1.2E-163 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 Gene3D G3DSA:3.20.20.80 139 571 1.2E-163 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 SUPERFAMILY SSF51445 140 568 4.32E-146 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 SUPERFAMILY SSF51445 606 679 4.32E-146 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 98 683 1.6E-277 T 06-07-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LFZ55_RS01615 949c6b08ae937f24d4997068d4e9e43a 692 Pfam PF02446 4-alpha-glucanotransferase 146 662 7.5E-130 T 06-07-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LFZ55_RS06440 69d90c9f0673d3f1782d3f221f25f37b 197 Pfam PF03592 Terminase small subunit 18 172 6.2E-26 T 06-07-2017 IPR005335 Terminase small subunit GO:0006323 LFZ55_RS04590 42d8a2a6e2fed18a61b57b488929128e 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.6E-184 T 06-07-2017 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 LFZ55_RS15145 df268ea6fa7059203827c0582e5fd9a0 315 SUPERFAMILY SSF55729 116 306 2.42E-56 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15145 df268ea6fa7059203827c0582e5fd9a0 315 SMART SM01006 146 193 5.7E-16 T 06-07-2017 IPR019432 Siderophore biosynthesis protein, conserved domain LFZ55_RS15145 df268ea6fa7059203827c0582e5fd9a0 315 Gene3D G3DSA:3.40.630.30 123 313 1.8E-67 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase LFZ55_RS15145 df268ea6fa7059203827c0582e5fd9a0 315 Pfam PF13523 Acetyltransferase (GNAT) domain 149 294 1.1E-49 T 06-07-2017 LFZ55_RS13330 b41f56737b34cb0e6693d5d687fc0620 447 PIRSF PIRSF006060 1 438 1.1E-56 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS13330 b41f56737b34cb0e6693d5d687fc0620 447 Pfam PF13520 Amino acid permease 16 409 4.1E-34 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS19775 503871cd8cc1296cddd6a41d49fe272f 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.85 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LFZ55_RS19775 503871cd8cc1296cddd6a41d49fe272f 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 1.1E-28 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LFZ55_RS19775 503871cd8cc1296cddd6a41d49fe272f 121 Pfam PF04999 Cell division protein FtsL 25 119 2.3E-35 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 Pfam PF13091 PLD-like domain 257 403 1.2E-22 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 PIRSF PIRSF000850 1 451 2.9E-269 T 06-07-2017 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 SUPERFAMILY SSF56024 9 214 8.48E-28 T 06-07-2017 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 SMART SM00155 352 379 1.4E-4 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 SMART SM00155 133 159 0.012 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 Gene3D G3DSA:3.30.870.10 254 394 4.1E-15 T 06-07-2017 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 Gene3D G3DSA:3.30.870.10 26 160 9.1E-16 T 06-07-2017 LFZ55_RS05895 24c2d19463a6e0e9b21f3e5518fe53d2 451 SUPERFAMILY SSF56024 252 393 1.95E-18 T 06-07-2017 LFZ55_RS00770 6a97e28e293943ace7bdf4582662d9a1 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 1.2E-238 T 06-07-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LFZ55_RS00770 6a97e28e293943ace7bdf4582662d9a1 551 Pfam PF02652 L-lactate permease 16 542 2.8E-232 T 06-07-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LFZ55_RS10200 ae39767644525d340b9398af88b46677 169 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 42 144 1.0E-4 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS10200 ae39767644525d340b9398af88b46677 169 Pfam PF07180 Protein of unknown function (DUF1401) 21 165 4.5E-71 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 LFZ55_RS13895 a681b6338730831319ba135f92ecb486 82 Pfam PF10798 Biofilm development protein YmgB/AriR 24 81 2.1E-27 T 06-07-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 LFZ55_RS13895 a681b6338730831319ba135f92ecb486 82 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 24 82 7.0E-27 T 06-07-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 LFZ55_RS08760 e68b637ca361cc8a3d04a4b57a2a93ad 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 1.1E-35 T 06-07-2017 IPR007345 Polysaccharide pyruvyl transferase LFZ55_RS08760 e68b637ca361cc8a3d04a4b57a2a93ad 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 425 4.1E-262 T 06-07-2017 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK LFZ55_RS22300 cba7a6dfc7dfca03c06f342bb67fc302 104 Pfam PF04341 Protein of unknown function, DUF485 13 98 1.5E-32 T 06-07-2017 IPR007436 Protein of unknown function DUF485 LFZ55_RS11720 0ce95f69bb448b2ef4b11bb8c8223bc7 172 PIRSF PIRSF011491 1 171 1.0E-78 T 06-07-2017 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted LFZ55_RS11720 0ce95f69bb448b2ef4b11bb8c8223bc7 172 SUPERFAMILY SSF53335 2 112 7.73E-16 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS11720 0ce95f69bb448b2ef4b11bb8c8223bc7 172 Gene3D G3DSA:3.40.50.150 2 148 1.9E-13 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS11720 0ce95f69bb448b2ef4b11bb8c8223bc7 172 Pfam PF13649 Methyltransferase domain 6 101 9.1E-10 T 06-07-2017 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 SUPERFAMILY SSF56784 1 269 6.48E-76 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 06-07-2017 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 8.6E-67 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.6E-31 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.7E-75 T 06-07-2017 IPR000150 Cof protein GO:0016787 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 Gene3D G3DSA:3.30.1240.10 88 183 2.5E-40 T 06-07-2017 LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 Gene3D G3DSA:3.40.50.1000 1 76 3.0E-61 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS00055 04af885b9b4b72397a46fe46ffbe7212 280 Gene3D G3DSA:3.40.50.1000 184 270 3.0E-61 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS17415 7a6f6d479bceca992ed370ed3e396048 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 9.1E-24 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LFZ55_RS17415 7a6f6d479bceca992ed370ed3e396048 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.135 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LFZ55_RS17415 7a6f6d479bceca992ed370ed3e396048 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 1.1E-43 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LFZ55_RS05810 a88e1d6f77aed97e4d8cd86a3ab30a93 172 Pfam PF13689 Domain of unknown function (DUF4154) 32 167 1.2E-28 T 06-07-2017 IPR025293 Protein of unknown function DUF4154 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 Gene3D G3DSA:1.10.3860.10 3 416 8.2E-129 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 SUPERFAMILY SSF118215 8 412 6.54E-121 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 3.7E-52 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 06-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 2.7E-116 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 LFZ55_RS22250 28cb3dc38e80708494af0e8e0f458464 436 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 06-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site LFZ55_RS19170 6a21fead59a02e944aca0408bd6b073b 134 Pfam PF16358 RcsF lipoprotein 28 132 1.6E-50 T 06-07-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 LFZ55_RS19170 6a21fead59a02e944aca0408bd6b073b 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 35.984 T 06-07-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 LFZ55_RS23870 2594674383654677c2a2d78bfa95221d 242 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.2E-53 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LFZ55_RS23870 2594674383654677c2a2d78bfa95221d 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 4.5E-61 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LFZ55_RS24170 b5433024e1a35817ad5c9da35f70dcfb 359 Pfam PF03278 IpaB/EvcA family 193 330 2.8E-21 T 06-07-2017 IPR004959 Bacterial effector protein IpgB-like GO:0009405 LFZ55_RS24170 b5433024e1a35817ad5c9da35f70dcfb 359 Pfam PF06767 Sif protein 8 326 8.4E-21 T 06-07-2017 IPR010637 Sif LFZ55_RS17565 74cff073e330d1b8f9671c8ef19881fc 701 Pfam PF02554 Carbon starvation protein CstA 32 403 8.8E-168 T 06-07-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 LFZ55_RS17565 74cff073e330d1b8f9671c8ef19881fc 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 1.0E-34 T 06-07-2017 IPR025299 CstA, C-terminal domain LFZ55_RS08420 3e225aededded02d08908ad4a5cf3221 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 1.9E-45 T 06-07-2017 IPR009698 Protein of unknown function DUF1282 LFZ55_RS14765 9782cf154cb6d96d459c00ff0ce19027 83 Pfam PF13007 Transposase C of IS166 homeodomain 40 80 3.5E-7 T 06-07-2017 IPR024463 Transposase TnpC, homeodomain LFZ55_RS03860 b83fc4b0e4ce02accfde75824e3ecbc2 235 Pfam PF04231 Endonuclease I 44 229 6.5E-46 T 06-07-2017 IPR007346 Endonuclease I GO:0004518 LFZ55_RS03860 b83fc4b0e4ce02accfde75824e3ecbc2 235 SUPERFAMILY SSF54060 25 230 3.06E-88 T 06-07-2017 LFZ55_RS08070 8243506e1277e15cce5320faf2e73b22 267 Pfam PF10670 Domain of unknown function (DUF4198) 20 242 1.4E-27 T 06-07-2017 IPR019613 Protein of unknown function DUF4198 LFZ55_RS11710 c1b4706a04699ed05ae63ecd1b307f3f 266 Gene3D G3DSA:3.40.50.620 30 180 1.8E-55 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LFZ55_RS11710 c1b4706a04699ed05ae63ecd1b307f3f 266 Pfam PF02698 DUF218 domain 40 173 1.3E-15 T 06-07-2017 IPR003848 Domain of unknown function DUF218 LFZ55_RS09255 618c9b482c22c7ee4b27dc591493d79d 149 SUPERFAMILY SSF49401 7 112 2.14E-12 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS09255 618c9b482c22c7ee4b27dc591493d79d 149 Pfam PF00419 Fimbrial protein 6 113 7.5E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS09255 618c9b482c22c7ee4b27dc591493d79d 149 Gene3D G3DSA:2.60.40.1090 7 112 1.6E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS07435 a4f303d9b263edc0cefa83795a9cbf2c 222 Gene3D G3DSA:3.30.70.1070 139 217 5.1E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS07435 a4f303d9b263edc0cefa83795a9cbf2c 222 Pfam PF05036 Sporulation related domain 143 216 1.6E-11 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS07435 a4f303d9b263edc0cefa83795a9cbf2c 222 Hamap MF_02022 Cell division protein DedD [dedD]. 10 221 24.358 T 06-07-2017 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 LFZ55_RS07435 a4f303d9b263edc0cefa83795a9cbf2c 222 SUPERFAMILY SSF110997 142 219 6.28E-13 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 LFZ55_RS09335 d005bf26b7bb9289496a3a738f5c8268 37 Pfam PF10554 Ash protein family 16 37 4.7E-6 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein LFZ55_RS09280 d005bf26b7bb9289496a3a738f5c8268 37 Pfam PF10554 Ash protein family 16 37 4.7E-6 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein LFZ55_RS24230 3e615e446f5bb03524500bd853cbf548 339 Pfam PF13098 Thioredoxin-like domain 209 318 2.6E-8 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24230 3e615e446f5bb03524500bd853cbf548 339 Gene3D G3DSA:3.40.30.10 207 321 1.2E-14 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24230 3e615e446f5bb03524500bd853cbf548 339 SUPERFAMILY SSF52833 198 336 6.03E-17 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS23155 61d4998adf5a94ae131b06f4d3970d19 166 PIRSF PIRSF034445 2 146 1.3E-29 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 LFZ55_RS23155 61d4998adf5a94ae131b06f4d3970d19 166 Pfam PF07813 LTXXQ motif family protein 41 135 1.2E-20 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 LFZ55_RS15945 e035578a41ddfffd3200e2b7119acab9 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 4.5E-58 T 06-07-2017 IPR005642 Lysine exporter LysO LFZ55_RS15945 e035578a41ddfffd3200e2b7119acab9 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 2.0E-74 T 06-07-2017 IPR005642 Lysine exporter LysO LFZ55_RS14785 3086f55cda07818dfc8e723681e46b76 245 Pfam PF10014 2OG-Fe dioxygenase 48 240 8.7E-54 T 06-07-2017 IPR018724 2OG-Fe dioxygenase LFZ55_RS12275 14f6f9cd21946eb3e788f2d6154f120a 468 Gene3D G3DSA:1.10.530.10 328 388 1.8E-8 T 06-07-2017 LFZ55_RS12275 14f6f9cd21946eb3e788f2d6154f120a 468 Gene3D G3DSA:1.10.530.10 259 277 1.8E-8 T 06-07-2017 LFZ55_RS12275 14f6f9cd21946eb3e788f2d6154f120a 468 SUPERFAMILY SSF53955 224 388 7.87E-31 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS12275 14f6f9cd21946eb3e788f2d6154f120a 468 Gene3D G3DSA:3.30.20.10 292 319 4.7E-5 T 06-07-2017 LFZ55_RS08815 a145596b49df46eea9f5f152f0e6d5b1 128 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 124 3.5E-56 T 06-07-2017 IPR010039 Capsule biosynthesis phosphatase LFZ55_RS08815 a145596b49df46eea9f5f152f0e6d5b1 128 Gene3D G3DSA:3.40.50.1000 1 122 9.2E-37 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS08815 a145596b49df46eea9f5f152f0e6d5b1 128 SUPERFAMILY SSF56784 1 105 9.87E-22 T 06-07-2017 IPR023214 HAD-like domain LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 298 2.8E-13 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 Gene3D G3DSA:2.40.50.100 47 80 6.9E-13 T 06-07-2017 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 Gene3D G3DSA:2.40.50.100 211 244 6.9E-13 T 06-07-2017 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 SUPERFAMILY SSF111369 173 275 3.4E-5 T 06-07-2017 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 SUPERFAMILY SSF111369 116 177 6.28E-5 T 06-07-2017 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 SUPERFAMILY SSF111369 40 126 6.15E-8 T 06-07-2017 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 6.1E-6 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS01325 edf70bce58359105d347264ffa102940 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 6.1E-6 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LFZ55_RS14635 a3925e2eb982262786cda074c0c75aa8 175 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 153 3.0E-30 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN LFZ55_RS14635 a3925e2eb982262786cda074c0c75aa8 175 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 164 5.6E-43 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN LFZ55_RS03880 d11a76451a0bfe9b6c8766c725af909d 93 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 72 4.0E-35 T 06-07-2017 IPR020263 Uncharacterised protein family YqgD LFZ55_RS03880 d11a76451a0bfe9b6c8766c725af909d 93 Pfam PF10885 Protein of unknown function (DUF2684) 1 83 4.0E-57 T 06-07-2017 IPR020263 Uncharacterised protein family YqgD LFZ55_RS18875 091082039caa77d979d8751793ac3f0e 353 SUPERFAMILY SSF140591 276 351 1.18E-12 T 06-07-2017 LFZ55_RS18875 091082039caa77d979d8751793ac3f0e 353 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 281 351 5.9E-9 T 06-07-2017 IPR013351 Type III secretion system effector delivery regulator TyeA-related LFZ55_RS06775 c35be9f6137ff581c32be0c17422b8a4 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.6E-161 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS06775 c35be9f6137ff581c32be0c17422b8a4 379 PIRSF PIRSF006078 1 378 1.8E-141 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS06775 c35be9f6137ff581c32be0c17422b8a4 379 SUPERFAMILY SSF110738 1 375 4.84E-143 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS06775 c35be9f6137ff581c32be0c17422b8a4 379 Pfam PF02595 Glycerate kinase family 3 373 9.0E-151 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LFZ55_RS06775 c35be9f6137ff581c32be0c17422b8a4 379 Gene3D G3DSA:3.90.1510.10 42 275 4.1E-100 T 06-07-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 LFZ55_RS15930 b41e13c296121165df1ad433411a81f7 322 Pfam PF04393 Protein of unknown function (DUF535) 40 316 4.4E-98 T 06-07-2017 IPR007488 Protein of unknown function DUF535 LFZ55_RS04735 c423cf9aee3210589dc227a560c57227 518 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 5 507 1.6E-175 T 06-07-2017 IPR013381 CRISPR-associated protein Cse1 LFZ55_RS04735 c423cf9aee3210589dc227a560c57227 518 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 6 469 1.3E-95 T 06-07-2017 IPR013381 CRISPR-associated protein Cse1 LFZ55_RS05320 0cfc267ff46f6a4d0c07c4ae14cb4f17 141 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 110 0.006 T 06-07-2017 IPR020143 Uncharacterised protein family, RP436 LFZ55_RS05320 0cfc267ff46f6a4d0c07c4ae14cb4f17 141 Pfam PF09335 SNARE associated Golgi protein 25 131 5.8E-11 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS11740 b89321f5352f1767bae720e3043ea1b7 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 8.8E-23 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LFZ55_RS11740 b89321f5352f1767bae720e3043ea1b7 215 SUPERFAMILY SSF161098 13 198 3.92E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11740 b89321f5352f1767bae720e3043ea1b7 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 1.6E-12 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS11740 b89321f5352f1767bae720e3043ea1b7 215 Gene3D G3DSA:1.10.3720.10 13 212 5.3E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS23915 3dc350edb4121c759eb859f07ae77c52 87 Pfam PF13710 ACT domain 13 73 2.5E-27 T 06-07-2017 LFZ55_RS23915 3dc350edb4121c759eb859f07ae77c52 87 SUPERFAMILY SSF55021 3 75 3.01E-11 T 06-07-2017 LFZ55_RS23915 3dc350edb4121c759eb859f07ae77c52 87 Gene3D G3DSA:3.30.70.260 1 74 4.1E-13 T 06-07-2017 LFZ55_RS22555 60397689db0b94dd21a42b77bdcc9c89 296 Gene3D G3DSA:1.10.3720.10 5 283 2.7E-63 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22555 60397689db0b94dd21a42b77bdcc9c89 296 SUPERFAMILY SSF161098 8 296 2.52E-69 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS22555 60397689db0b94dd21a42b77bdcc9c89 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 289 2.8E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS04965 b209c8dbadee0faf234a14f6da7cf8c5 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 37 52 5.6E-27 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS04965 b209c8dbadee0faf234a14f6da7cf8c5 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 16 37 5.6E-27 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS04965 b209c8dbadee0faf234a14f6da7cf8c5 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 52 74 5.6E-27 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS04965 b209c8dbadee0faf234a14f6da7cf8c5 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 4 80 1.5E-28 T 06-07-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 LFZ55_RS04965 b209c8dbadee0faf234a14f6da7cf8c5 86 Pfam PF01313 Bacterial export proteins, family 3 7 74 1.5E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LFZ55_RS18485 ee17406f3617f883387922eb0f146f04 225 Pfam PF07302 AroM protein 5 224 6.5E-72 T 06-07-2017 IPR010843 Uncharacterised protein family AroM LFZ55_RS18485 ee17406f3617f883387922eb0f146f04 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 8.0E-113 T 06-07-2017 IPR010843 Uncharacterised protein family AroM LFZ55_RS23365 71ca4c4376edd1ba5d2721bf3cb34e35 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 32 387 1.3E-129 T 06-07-2017 LFZ55_RS23365 71ca4c4376edd1ba5d2721bf3cb34e35 413 Gene3D G3DSA:1.50.10.10 2 395 2.2E-100 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LFZ55_RS23365 71ca4c4376edd1ba5d2721bf3cb34e35 413 Hamap MF_00998 Sulfoquinovose isomerase. 1 413 85.04 T 06-07-2017 IPR030875 Sulfoquinovose isomerase GO:0061593 MetaCyc: PWY-7446 LFZ55_RS23365 71ca4c4376edd1ba5d2721bf3cb34e35 413 SUPERFAMILY SSF48208 3 409 1.23E-116 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LFZ55_RS05410 4abc9f495a8eddfaf79b3a9b502b1f63 108 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 1.6E-24 T 06-07-2017 IPR010279 Protein of unknown function DUF883, ElaB LFZ55_RS12805 b271943ca35e055e2ec0a0efc8346e3e 344 Pfam PF01594 Domain of unknown function DUF20 14 328 1.6E-72 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like LFZ55_RS19950 976dbdca44e87ae4b49a499de1b12256 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 8.4E-33 T 06-07-2017 IPR007474 ApaG domain LFZ55_RS19950 976dbdca44e87ae4b49a499de1b12256 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.509 T 06-07-2017 IPR023065 Uncharacterised protein family ApaG LFZ55_RS19950 976dbdca44e87ae4b49a499de1b12256 125 SUPERFAMILY SSF110069 5 125 3.79E-48 T 06-07-2017 IPR007474 ApaG domain LFZ55_RS19950 976dbdca44e87ae4b49a499de1b12256 125 Gene3D G3DSA:2.60.40.1470 6 125 7.1E-46 T 06-07-2017 IPR007474 ApaG domain LFZ55_RS00005 1dfd0ab6509fae87d919e33c2b17b384 121 Pfam PF11638 DnaA N-terminal domain 8 68 1.0E-20 T 06-07-2017 IPR024633 DnaA N-terminal domain LFZ55_RS07470 05f3c2136aa62b819de92b90090bb0b9 468 PIRSF PIRSF006060 5 466 4.8E-68 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LFZ55_RS07470 05f3c2136aa62b819de92b90090bb0b9 468 Pfam PF00324 Amino acid permease 24 431 3.7E-89 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LFZ55_RS02660 4f0c9f1a5f13a36afd1a988559f7914a 260 Pfam PF02405 Permease MlaE 44 256 1.7E-72 T 06-07-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 LFZ55_RS02660 4f0c9f1a5f13a36afd1a988559f7914a 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.9E-105 T 06-07-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LFZ55_RS20670 2d21c56a05c75c8e653ab0084adcab84 223 Pfam PF07670 Nucleoside recognition 81 160 9.6E-6 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 LFZ55_RS24240 ad71889d2a663284d7d908748bd86b00 710 Gene3D G3DSA:3.40.50.300 138 212 1.7E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24240 ad71889d2a663284d7d908748bd86b00 710 Gene3D G3DSA:3.40.50.300 387 600 1.7E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24240 ad71889d2a663284d7d908748bd86b00 710 SUPERFAMILY SSF52540 222 318 1.74E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24240 ad71889d2a663284d7d908748bd86b00 710 SUPERFAMILY SSF52540 139 184 1.74E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS24240 ad71889d2a663284d7d908748bd86b00 710 SUPERFAMILY SSF52540 345 599 1.74E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS08530 8327c43df1f35ee57ffc2b009e3c4383 104 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 19 93 2.0E-33 T 06-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB LFZ55_RS08530 8327c43df1f35ee57ffc2b009e3c4383 104 Pfam PF11776 Nickel/cobalt transporter regulator 44 93 2.9E-20 T 06-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB LFZ55_RS12490 74c6d93de8a209a9135328b957dd5e5f 136 SUPERFAMILY SSF52833 5 122 5.04E-19 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS12490 74c6d93de8a209a9135328b957dd5e5f 136 Pfam PF07449 Hydrogenase-1 expression protein HyaE 12 114 2.0E-39 T 06-07-2017 IPR010893 [NiFe]-hydrogenase maturation factor HyaE LFZ55_RS12490 74c6d93de8a209a9135328b957dd5e5f 136 Gene3D G3DSA:3.40.30.10 19 99 1.2E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold LFZ55_RS24055 12cadfe2f2be95b85b584a2e8628d7d8 126 Pfam PF03899 ATP synthase I chain 13 108 9.5E-15 T 06-07-2017 IPR005598 ATP synthase protein I LFZ55_RS13970 19212fc0edb260fe900744a2034836d0 104 ProDom PD170898 LIPOPROTEIN TRL MEMBRANE OUTER TRNA-ASSOCIATED OUTERMEMBRANE LOCUS 17 103 2.0E-42 T 06-07-2017 LFZ55_RS13970 19212fc0edb260fe900744a2034836d0 104 Pfam PF13146 TRL-like protein family 30 104 1.3E-26 T 06-07-2017 IPR025113 TRL-like protein family LFZ55_RS11105 4535cc0511041a9635c2951da1e50a5a 134 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 7.3E-10 T 06-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein LFZ55_RS01315 2efc196d80ce01c4fc0332f6048ae4f3 498 Pfam PF01384 Phosphate transporter family 30 487 7.3E-86 T 06-07-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 LFZ55_RS00915 2138e9d8be44ab91bc90ed27c6433b11 117 Pfam PF05360 yiaA/B two helix domain 13 58 2.2E-12 T 06-07-2017 IPR008024 YiaAB two helix LFZ55_RS00915 2138e9d8be44ab91bc90ed27c6433b11 117 Pfam PF05360 yiaA/B two helix domain 67 116 4.6E-9 T 06-07-2017 IPR008024 YiaAB two helix LFZ55_RS00405 6adc366c2e3b161e483b87519ed5dbb6 396 Gene3D G3DSA:3.40.50.300 225 371 1.4E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00405 6adc366c2e3b161e483b87519ed5dbb6 396 Gene3D G3DSA:3.40.50.300 1 161 1.4E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00405 6adc366c2e3b161e483b87519ed5dbb6 396 SUPERFAMILY SSF52540 1 360 1.63E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS00405 6adc366c2e3b161e483b87519ed5dbb6 396 Pfam PF13476 AAA domain 5 247 1.3E-22 T 06-07-2017 LFZ55_RS05180 b3f86a01141e926035762eea042425fe 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 5.0E-55 T 06-07-2017 IPR010005 Formate hydrogenlyase maturation HycH LFZ55_RS05180 b3f86a01141e926035762eea042425fe 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 4.0E-73 T 06-07-2017 IPR010005 Formate hydrogenlyase maturation HycH LFZ55_RS12525 33983a0fa799e09a5b8abed063f10bdb 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 3.4E-59 T 06-07-2017 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 LFZ55_RS15245 6b037f47c0f2d992119af35f2c887cde 1060 Pfam PF06761 Intracellular multiplication and human macrophage-killing 408 704 6.5E-51 T 06-07-2017 IPR009612 ImcF-related LFZ55_RS15245 6b037f47c0f2d992119af35f2c887cde 1060 Pfam PF06744 Type VI secretion protein IcmF C-terminal 808 1003 8.5E-45 T 06-07-2017 IPR010623 Type VI secretion system IcmF, C-terminal LFZ55_RS10380 b19887a22b03d50c95e55a648b231ff6 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 5.2E-75 T 06-07-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LFZ55_RS10380 b19887a22b03d50c95e55a648b231ff6 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 6.5E-129 T 06-07-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LFZ55_RS06125 0e063c9c77171ed5b38e90453a1aba42 212 Pfam PF06226 Protein of unknown function (DUF1007) 9 211 2.0E-62 T 06-07-2017 IPR010412 Protein of unknown function DUF1007 LFZ55_RS06125 0e063c9c77171ed5b38e90453a1aba42 212 PIRSF PIRSF008159 1 212 3.7E-72 T 06-07-2017 IPR016537 Uncharacterised conserved protein UCP008159, LFZ55_RS17790 c681015bf37cc0af1d6f425e635e01a6 231 Pfam PF00563 EAL domain 20 223 2.4E-11 T 06-07-2017 IPR001633 EAL domain LFZ55_RS17790 c681015bf37cc0af1d6f425e635e01a6 231 Gene3D G3DSA:3.20.20.450 21 219 3.5E-7 T 06-07-2017 IPR001633 EAL domain LFZ55_RS17790 c681015bf37cc0af1d6f425e635e01a6 231 SUPERFAMILY SSF141868 20 223 8.89E-15 T 06-07-2017 IPR001633 EAL domain LFZ55_RS12130 90c148aea11376a98e45a2e3b645dcce 126 Gene3D G3DSA:3.90.1590.10 2 117 9.6E-19 T 06-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 LFZ55_RS12130 90c148aea11376a98e45a2e3b645dcce 126 SUPERFAMILY SSF51316 2 110 6.91E-21 T 06-07-2017 IPR011057 Mss4-like LFZ55_RS12130 90c148aea11376a98e45a2e3b645dcce 126 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 5 95 3.6E-11 T 06-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 LFZ55_RS03080 d199090f1d41892e293c135cf1cdbda3 127 Pfam PF13721 SecD export protein N-terminal TM region 12 104 3.9E-17 T 06-07-2017 IPR027398 SecD export protein N-terminal TM domain LFZ55_RS03080 d199090f1d41892e293c135cf1cdbda3 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 28.889 T 06-07-2017 IPR026574 Modulator protein MzrA LFZ55_RS00350 bbf3d57b924add6bade48ba492dbfa96 231 Pfam PF02308 MgtC family 14 133 4.6E-38 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LFZ55_RS00350 bbf3d57b924add6bade48ba492dbfa96 231 PRINTS PR01837 MgtC/SapB protein signature 61 83 6.5E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LFZ55_RS00350 bbf3d57b924add6bade48ba492dbfa96 231 PRINTS PR01837 MgtC/SapB protein signature 36 54 6.5E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LFZ55_RS00350 bbf3d57b924add6bade48ba492dbfa96 231 PRINTS PR01837 MgtC/SapB protein signature 88 112 6.5E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LFZ55_RS00350 bbf3d57b924add6bade48ba492dbfa96 231 PRINTS PR01837 MgtC/SapB protein signature 17 36 6.5E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LFZ55_RS10165 131977d7aa141bfa4d0ce96c5814e94b 148 Gene3D G3DSA:2.40.50.110 24 132 1.2E-29 T 06-07-2017 LFZ55_RS10165 131977d7aa141bfa4d0ce96c5814e94b 148 SUPERFAMILY SSF50203 22 134 1.06E-38 T 06-07-2017 IPR008992 Enterotoxin GO:0009405 LFZ55_RS14450 114877648743f7e88b1d70e77364d1c6 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.8E-55 T 06-07-2017 IPR010835 Protein of unknown function DUF1439 LFZ55_RS04305 b12ddf08eb1f8ef172e008a879a9308f 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 380 1.4E-8 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 LFZ55_RS14915 d29a4c3a05c5af17312c57eeb5e01b35 75 Pfam PF13993 YccJ-like protein 9 75 7.7E-39 T 06-07-2017 IPR025600 YccJ-like protein LFZ55_RS15675 e2795628e4092e0363bca028d1808b0e 267 SUPERFAMILY SSF53335 6 245 2.74E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS15675 e2795628e4092e0363bca028d1808b0e 267 Pfam PF13489 Methyltransferase domain 42 202 2.6E-17 T 06-07-2017 LFZ55_RS15675 e2795628e4092e0363bca028d1808b0e 267 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 42.979 T 06-07-2017 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 LFZ55_RS15675 e2795628e4092e0363bca028d1808b0e 267 Gene3D G3DSA:3.40.50.150 5 239 1.3E-34 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LFZ55_RS03125 cf0e5d8b43b6e2278cec96d6dc1b0da2 163 Pfam PF01863 Protein of unknown function DUF45 93 149 4.8E-11 T 06-07-2017 IPR002725 Protein of unknown function DUF45 LFZ55_RS07440 8e28aca5af1726ecf463eb86025823e9 162 Pfam PF02674 Colicin V production protein 4 141 8.1E-36 T 06-07-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 LFZ55_RS20220 eaf6d95f75bfc52fe8012b36b573bf8c 231 Pfam PF15977 Winged helix-turn-helix DNA binding 162 228 2.7E-27 T 06-07-2017 LFZ55_RS08415 e5844e59e94e80c433f6f4b7ba6e21fe 198 Pfam PF09335 SNARE associated Golgi protein 32 153 6.3E-16 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS02835 a7d0ea97344992507d1ab2d9343a73bf 298 Pfam PF01136 Peptidase family U32 99 204 1.0E-9 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 LFZ55_RS24760 7ac65ca11649ff7c7f56e2b9d28e6720 25 Pfam PF08048 Tap RepA1 leader peptide 1 25 2.0E-19 T 06-07-2017 IPR012605 RepA1 leader peptide Tap LFZ55_RS24760 7ac65ca11649ff7c7f56e2b9d28e6720 25 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 25 1.5E-19 T 06-07-2017 IPR012605 RepA1 leader peptide Tap LFZ55_RS06925 b279d1606a24454fb1b7109106244a2e 96 SUPERFAMILY SSF143414 1 89 2.09E-31 T 06-07-2017 LFZ55_RS06925 b279d1606a24454fb1b7109106244a2e 96 SMART SM00877 2 78 2.2E-35 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06925 b279d1606a24454fb1b7109106244a2e 96 Pfam PF00936 BMC domain 3 78 1.6E-27 T 06-07-2017 IPR000249 Microcompartment protein, bacteria LFZ55_RS06925 b279d1606a24454fb1b7109106244a2e 96 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site LFZ55_RS06925 b279d1606a24454fb1b7109106244a2e 96 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 5.0E-18 T 06-07-2017 LFZ55_RS00550 65dcc03f4fff9d2416763982fcda7c86 293 SUPERFAMILY SSF56281 39 257 9.96E-40 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS00550 65dcc03f4fff9d2416763982fcda7c86 293 SMART SM00849 61 246 2.3E-13 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS00550 65dcc03f4fff9d2416763982fcda7c86 293 Gene3D G3DSA:3.60.15.10 31 257 3.7E-40 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS00550 65dcc03f4fff9d2416763982fcda7c86 293 Pfam PF00753 Metallo-beta-lactamase superfamily 63 241 4.1E-19 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS21510 5446c5d00040ce58f407aa7445e9385b 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 3.8E-76 T 06-07-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LFZ55_RS21510 5446c5d00040ce58f407aa7445e9385b 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 8.8E-101 T 06-07-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LFZ55_RS19375 70e6aac463d967d7fe29d683aef0eeb0 205 Pfam PF03458 UPF0126 domain 4 78 2.1E-23 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 LFZ55_RS19375 70e6aac463d967d7fe29d683aef0eeb0 205 Pfam PF03458 UPF0126 domain 92 161 8.1E-19 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 LFZ55_RS04885 68f7dcbae53b7b68e2bea843066cfd7a 498 Pfam PF02447 GntP family permease 7 458 2.5E-142 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS04885 68f7dcbae53b7b68e2bea843066cfd7a 498 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 459 1.5E-97 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS04885 68f7dcbae53b7b68e2bea843066cfd7a 498 PIRSF PIRSF002746 2 461 3.0E-148 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS06770 030978474e20d00ec29a2869d8aab7bb 422 Pfam PF02447 GntP family permease 9 415 4.4E-26 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LFZ55_RS00340 2cb38cd1fd9f6503e120d1ed48981723 317 Pfam PF04754 Putative transposase, YhgA-like 8 209 1.7E-86 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like LFZ55_RS00340 2cb38cd1fd9f6503e120d1ed48981723 317 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 313 4.3E-57 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 LFZ55_RS01900 4b6c2775678a68edc853fca0c55dc412 277 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 274 4.0E-115 T 06-07-2017 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 LFZ55_RS01900 4b6c2775678a68edc853fca0c55dc412 277 SUPERFAMILY SSF52096 6 222 1.36E-35 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS01900 4b6c2775678a68edc853fca0c55dc412 277 Gene3D G3DSA:3.90.226.10 9 191 2.1E-33 T 06-07-2017 IPR029045 ClpP/crotonase-like domain LFZ55_RS01900 4b6c2775678a68edc853fca0c55dc412 277 Pfam PF01039 Carboxyl transferase domain 12 228 1.9E-16 T 06-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LFZ55_RS18135 eec493e9c49f12bdd49a955ffe4c3d9e 189 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 45 149 3.4E-41 T 06-07-2017 LFZ55_RS10340 aced73f3c6287a713462a4685c84923e 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 1.2E-29 T 06-07-2017 IPR019672 Protein of unknown function DUF2627 LFZ55_RS14515 733c447a0cc82d93a4422a83b9885be2 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 69 2.9E-9 T 06-07-2017 IPR010780 Protein of unknown function DUF1375 LFZ55_RS21205 f11c88d74d829f386a410b778d4bc11e 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 3.2E-117 T 06-07-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 LFZ55_RS21205 f11c88d74d829f386a410b778d4bc11e 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 1.5E-72 T 06-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 LFZ55_RS00460 24bee6c3fb8608cd80b7de213e8ce00e 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 187 2.5E-86 T 06-07-2017 IPR010006 Bacteriophage P4, Psu, polarity suppression protein LFZ55_RS16870 bd7fb7ad609977e4971534f9b53a9d58 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 6.1E-41 T 06-07-2017 IPR011846 Cyd operon protein YbgE LFZ55_RS16870 bd7fb7ad609977e4971534f9b53a9d58 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 2.6E-32 T 06-07-2017 IPR011846 Cyd operon protein YbgE LFZ55_RS14385 89c58a5dffe05629eb57dfc64a34f78b 232 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 79 1.7E-22 T 06-07-2017 IPR005648 Flagellar hook capping protein LFZ55_RS14385 89c58a5dffe05629eb57dfc64a34f78b 232 Pfam PF13860 FlgD Ig-like domain 119 190 3.2E-24 T 06-07-2017 IPR025965 FlgD Ig-like domain LFZ55_RS14385 89c58a5dffe05629eb57dfc64a34f78b 232 Pfam PF13861 FlgD Tudor-like domain 88 229 1.1E-15 T 06-07-2017 IPR025963 FlgD Tudor-like domain LFZ55_RS18250 2760a8a469d7076079fedb011d11f8b3 491 SUPERFAMILY SSF103473 10 404 1.7E-41 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS18250 2760a8a469d7076079fedb011d11f8b3 491 Gene3D G3DSA:1.20.1250.20 223 405 5.1E-12 T 06-07-2017 LFZ55_RS18250 2760a8a469d7076079fedb011d11f8b3 491 Gene3D G3DSA:1.20.1250.20 17 199 4.0E-16 T 06-07-2017 LFZ55_RS18250 2760a8a469d7076079fedb011d11f8b3 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.5E-126 T 06-07-2017 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 LFZ55_RS18250 2760a8a469d7076079fedb011d11f8b3 491 Pfam PF07690 Major Facilitator Superfamily 17 366 7.0E-31 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS11160 47084427366f06b619bb2bcc38652e42 14 Pfam PF08255 Trp-operon Leader Peptide 1 14 5.4E-9 T 06-07-2017 IPR013205 Leader peptide, tryptophan-operon LFZ55_RS17610 cf4d298bdea541c8f16bf4896b555bd4 329 Gene3D G3DSA:1.10.3470.10 5 328 8.9E-89 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS17610 cf4d298bdea541c8f16bf4896b555bd4 329 SUPERFAMILY SSF81345 4 324 8.76E-71 T 06-07-2017 IPR029022 ABC transporter, BtuC-like LFZ55_RS17610 cf4d298bdea541c8f16bf4896b555bd4 329 Pfam PF01032 FecCD transport family 19 323 1.8E-83 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LFZ55_RS18530 1da9abbf410811955861df737e9e3e7f 237 Pfam PF06904 Extensin-like protein C-terminus 64 237 2.4E-54 T 06-07-2017 IPR009683 Extensin-like, C-terminal LFZ55_RS21635 5ef6d47c46b519ac4635b2a7b357176b 354 SUPERFAMILY SSF56281 36 302 1.96E-26 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS21635 5ef6d47c46b519ac4635b2a7b357176b 354 Gene3D G3DSA:3.60.15.10 1 336 8.1E-130 T 06-07-2017 IPR001279 Metallo-beta-lactamase LFZ55_RS21635 5ef6d47c46b519ac4635b2a7b357176b 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 7.5E-15 T 06-07-2017 LFZ55_RS14065 f661f7ff684eafeb5acbb567a4958f0f 1058 Gene3D G3DSA:2.170.270.10 915 1036 6.3E-9 T 06-07-2017 LFZ55_RS14065 f661f7ff684eafeb5acbb567a4958f0f 1058 SUPERFAMILY SSF82199 916 1036 3.76E-9 T 06-07-2017 LFZ55_RS10915 31fb4b85894442a15fcd67f3851f3a12 474 Pfam PF11924 Invasin beta-domain of outer membrane 68 346 1.9E-99 T 06-07-2017 IPR024519 Invasin beta-domain of outer membrane LFZ55_RS14520 c49c5c58e5b173df7e2608799d896f39 847 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 51.852 T 06-07-2017 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 LFZ55_RS14520 c49c5c58e5b173df7e2608799d896f39 847 Gene3D G3DSA:3.90.550.10 339 389 5.6E-4 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS14520 c49c5c58e5b173df7e2608799d896f39 847 SUPERFAMILY SSF53448 244 532 1.69E-25 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases LFZ55_RS14520 c49c5c58e5b173df7e2608799d896f39 847 Pfam PF00535 Glycosyl transferase family 2 246 428 5.4E-22 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LFZ55_RS23305 9211de7fa3c2cc045fa13a889fd9d64a 82 Pfam PF01402 Ribbon-helix-helix protein, copG family 16 49 4.8E-6 T 06-07-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LFZ55_RS20750 eb5980bf15d102c555f8d789b81724ec 288 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 32 288 5.8E-85 T 06-07-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LFZ55_RS19570 a029ea3f407e0c39a4a16edb5476cb52 520 Pfam PF11737 Protein of unknown function (DUF3300) 61 335 2.3E-85 T 06-07-2017 IPR021728 Protein of unknown function DUF3300 LFZ55_RS15530 71fc04e1d985ec310571a6e6376e9a7e 148 PIRSF PIRSF028777 1 139 4.9E-54 T 06-07-2017 IPR031308 Uncharacterised conserved protein UCP028777 LFZ55_RS15530 71fc04e1d985ec310571a6e6376e9a7e 148 Pfam PF03733 Inner membrane component domain 77 127 2.2E-17 T 06-07-2017 IPR005185 Inner membrane component domain LFZ55_RS15530 71fc04e1d985ec310571a6e6376e9a7e 148 Pfam PF03733 Inner membrane component domain 4 53 2.8E-9 T 06-07-2017 IPR005185 Inner membrane component domain LFZ55_RS15050 397b590bfb38187687a73e0276cb9421 56 Pfam PF13132 Domain of unknown function (DUF3950) 21 50 2.7E-21 T 06-07-2017 IPR025030 Domain of unknown function DUF3950 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 Pfam PF01263 Aldose 1-epimerase 17 342 1.9E-88 T 06-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 06-07-2017 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 SUPERFAMILY SSF74650 5 343 1.63E-107 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 2.7E-145 T 06-07-2017 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 PIRSF PIRSF005096 2 346 4.3E-123 T 06-07-2017 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 LFZ55_RS16745 f6756f3ec99486a8690dc1beeea3eabc 346 Gene3D G3DSA:2.70.98.10 9 343 3.1E-115 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LFZ55_RS06980 6e3a9e09224caadad0591c419eee8655 350 SMART SM00342 256 342 9.2E-22 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS06980 6e3a9e09224caadad0591c419eee8655 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LFZ55_RS06980 6e3a9e09224caadad0591c419eee8655 350 SUPERFAMILY SSF46689 240 290 1.97E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS06980 6e3a9e09224caadad0591c419eee8655 350 Pfam PF12833 Helix-turn-helix domain 262 342 5.8E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LFZ55_RS06980 6e3a9e09224caadad0591c419eee8655 350 Gene3D G3DSA:1.10.10.60 238 295 4.4E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 LFZ55_RS07375 f8cb97ed32d0169e2516e9ab37e88f14 171 Pfam PF12883 Protein of unknown function (DUF3828) 22 141 1.9E-36 T 06-07-2017 IPR024289 Domain of unknown function DUF3828 LFZ55_RS24935 c7a36e89a49e6f8ac9e12d57889710f9 459 Pfam PF03743 Bacterial conjugation TrbI-like protein 211 407 1.8E-30 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LFZ55_RS10575 9288703a025f64ad2a729eaef36a9546 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 6.8E-179 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS10575 9288703a025f64ad2a729eaef36a9546 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 4.7E-100 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS10575 9288703a025f64ad2a729eaef36a9546 378 PIRSF PIRSF000267 2 377 3.2E-117 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LFZ55_RS17370 9961bffbdc57045eb0bcd51560393d73 370 Pfam PF01098 Cell cycle protein 20 364 7.7E-126 T 06-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LFZ55_RS17370 9961bffbdc57045eb0bcd51560393d73 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 2.2E-137 T 06-07-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LFZ55_RS17370 9961bffbdc57045eb0bcd51560393d73 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 06-07-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LFZ55_RS17655 bc398d7b9e9b4dcf487acad5c69dcdc5 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 6.0E-14 T 06-07-2017 IPR010590 Protein of unknown function DUF1158 LFZ55_RS17655 bc398d7b9e9b4dcf487acad5c69dcdc5 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 2.1E-44 T 06-07-2017 IPR010590 Protein of unknown function DUF1158 LFZ55_RS13305 476ed48c8dd6e4955abaf07415c7a0d9 340 Pfam PF03916 Polysulphide reductase, NrfD 10 290 1.3E-59 T 06-07-2017 IPR005614 NrfD family LFZ55_RS10810 574f2fef1db75609db80f0b466855b0e 156 Pfam PF06841 T4-like virus tail tube protein gp19 17 153 1.7E-44 T 06-07-2017 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 LFZ55_RS10810 574f2fef1db75609db80f0b466855b0e 156 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 14 154 6.1E-36 T 06-07-2017 IPR011747 Conserved hypothetical protein CHP02241 LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 PIRSF PIRSF039085 1 242 6.5E-84 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 SUPERFAMILY SSF52540 3 233 2.03E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 Pfam PF00005 ABC transporter 20 170 6.7E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 Gene3D G3DSA:3.40.50.300 3 237 4.2E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS15995 c1db6e8c09abea379bf21c6626195976 242 SMART SM00382 27 218 9.8E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 Pfam PF01266 FAD dependent oxidoreductase 31 385 1.4E-38 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 Gene3D G3DSA:3.50.50.60 129 254 6.3E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 Gene3D G3DSA:3.50.50.60 20 87 6.3E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 Gene3D G3DSA:3.50.50.60 347 398 6.3E-42 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 SUPERFAMILY SSF51905 347 400 4.79E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS03620 2d24535772808f6528860c07786aab78 433 SUPERFAMILY SSF51905 30 255 4.79E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LFZ55_RS08755 959ebb7cf84769bf71578458d86b50b2 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 325 5.8E-67 T 06-07-2017 LFZ55_RS10120 acb3329f02bbe1a4f7ad3dad6e1277f9 143 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 12 142 3.6E-14 T 06-07-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly LFZ55_RS01350 4fc09ec1527ef0ce2b4ba98864c0dcd5 349 Pfam PF01594 Domain of unknown function DUF20 14 328 3.1E-77 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like LFZ55_RS18090 f5af28f2760284101849f1c7d86dd79c 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 1.2E-61 T 06-07-2017 IPR019693 Biofilm formation regulator YbaJ LFZ55_RS11475 97935f1caca74ee95b7eada7fc31af7e 467 PIRSF PIRSF019381 1 467 1.3E-217 T 06-07-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein LFZ55_RS11475 97935f1caca74ee95b7eada7fc31af7e 467 Pfam PF04317 YcjX-like family, DUF463 22 466 8.8E-185 T 06-07-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein LFZ55_RS08945 50fea6ed87c06370b7edb073d937936f 352 Pfam PF04632 Fusaric acid resistance protein family 21 338 4.6E-18 T 06-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LFZ55_RS16190 f956211ed07011b8371388bc38a083ba 375 Pfam PF10758 Protein of unknown function (DUF2586) 3 368 3.1E-168 T 06-07-2017 IPR019694 Bacteriophage HP1, Orf23 LFZ55_RS17165 5f5e510597385fdab84ef57f1c7e1375 468 Gene3D G3DSA:2.40.160.10 38 468 2.9E-52 T 06-07-2017 IPR023614 Porin domain LFZ55_RS17165 5f5e510597385fdab84ef57f1c7e1375 468 Pfam PF03573 outer membrane porin, OprD family 33 431 3.8E-23 T 06-07-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LFZ55_RS09635 b6e52fdd30f29235a666bd61bc0016b6 401 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 229 401 6.0E-97 T 06-07-2017 IPR020193 Flagellin lysine-N-methylase, C-terminal LFZ55_RS06240 593c1c25579cec0671c124b90de704ec 269 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 267 9.3E-29 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 LFZ55_RS04720 cf70c58c49d05c5c7e816df9cdc09c36 317 ProDom PD040905 SECRETED SOPD SOP POSSIBLE HOMOLOGOUS FAMILY EFFECTOR THE TRANSFERRED VIRULENCE 1 317 3.0E-165 T 06-07-2017 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 LFZ55_RS04720 cf70c58c49d05c5c7e816df9cdc09c36 317 Pfam PF11047 Salmonella outer protein D 1 316 7.2E-173 T 06-07-2017 IPR022747 Salmonella outer protein D GO:0009405|GO:0033644 LFZ55_RS18715 aa72eabd6c96938ba9e8046d1c2c47e2 851 Pfam PF13954 PapC N-terminal domain 30 169 1.2E-32 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 LFZ55_RS18715 aa72eabd6c96938ba9e8046d1c2c47e2 851 Pfam PF13953 PapC C-terminal domain 770 833 6.8E-20 T 06-07-2017 IPR025949 PapC-like, C-terminal domain LFZ55_RS18715 aa72eabd6c96938ba9e8046d1c2c47e2 851 SUPERFAMILY SSF141729 53 159 7.85E-23 T 06-07-2017 LFZ55_RS18715 aa72eabd6c96938ba9e8046d1c2c47e2 851 Pfam PF00577 Outer membrane usher protein 189 761 4.4E-145 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LFZ55_RS01070 02e426fd0b41912964594b27e8691ded 43 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 9 43 3.6E-23 T 06-07-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr LFZ55_RS07355 6f1becfb08bf4ee1a48e3a86f3dad0c0 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 9.7E-82 T 06-07-2017 IPR007411 Elongation factor P hydroxylase LFZ55_RS10125 4799741a8e18ccb051ce49b18e624270 383 Pfam PF01757 Acyltransferase family 10 353 1.7E-20 T 06-07-2017 IPR002656 Acyltransferase 3 GO:0016747 LFZ55_RS20985 92c3e638747252e5ced7148e81798a5c 108 Pfam PF11190 Protein of unknown function (DUF2976) 21 107 1.1E-30 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 LFZ55_RS20985 92c3e638747252e5ced7148e81798a5c 108 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 8 108 3.8E-39 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 LFZ55_RS01440 3465e4be87e4d9cd1e38fc893602e36c 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 2.2E-70 T 06-07-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LFZ55_RS05770 4a6e4b98516bf557bf7d1b2d2f75c742 263 Pfam PF01578 Cytochrome C assembly protein 36 261 2.7E-45 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LFZ55_RS23130 e347ae1876d88c5defd1cd8a8f532954 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 17 433 3.0E-19 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LFZ55_RS11195 d479316e8d1962ba421d5f1345873d44 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 3.3E-42 T 06-07-2017 IPR019633 Protein of unknown function DUF2498 LFZ55_RS24770 d52ec4665f22959555e662b48c7b3857 88 Pfam PF10723 Replication regulatory protein RepB 8 87 1.7E-46 T 06-07-2017 IPR019661 Replication regulatory protein RepA2 GO:0006276 LFZ55_RS16700 50a4ca49e0000c2c1af36881908b942e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 2.7E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16700 50a4ca49e0000c2c1af36881908b942e 229 SUPERFAMILY SSF161098 6 219 1.2E-51 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS16700 50a4ca49e0000c2c1af36881908b942e 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 221 1.9E-72 T 06-07-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 LFZ55_RS16700 50a4ca49e0000c2c1af36881908b942e 229 Gene3D G3DSA:1.10.3720.10 8 226 7.3E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LFZ55_RS17810 2f489c7f3fefc7f5064a45afe6e998ce 335 SUPERFAMILY SSF49401 196 335 1.24E-13 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS17810 2f489c7f3fefc7f5064a45afe6e998ce 335 Pfam PF00419 Fimbrial protein 188 334 1.6E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS01090 ffa4b83023fee5c45059c961307f791e 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 60 6.0E-29 T 06-07-2017 IPR024487 Cellulose biosynthesis protein BcsR LFZ55_RS01090 ffa4b83023fee5c45059c961307f791e 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 4.2E-23 T 06-07-2017 IPR024487 Cellulose biosynthesis protein BcsR LFZ55_RS00720 f3f48a1efbf12e0ef9bbc4a6b8031d9f 427 SUPERFAMILY SSF51261 226 425 7.85E-48 T 06-07-2017 IPR011055 Duplicated hybrid motif LFZ55_RS00720 f3f48a1efbf12e0ef9bbc4a6b8031d9f 427 Gene3D G3DSA:2.70.70.10 289 426 9.8E-37 T 06-07-2017 LFZ55_RS00720 f3f48a1efbf12e0ef9bbc4a6b8031d9f 427 Pfam PF01551 Peptidase family M23 328 421 7.2E-26 T 06-07-2017 IPR016047 Peptidase M23 LFZ55_RS04300 95d46127747454378ad74b36cfa08e55 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 4.8E-20 T 06-07-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 LFZ55_RS14955 c37777c76496ebc65046695ca2350a18 101 Pfam PF13591 MerR HTH family regulatory protein 8 90 1.2E-24 T 06-07-2017 LFZ55_RS14955 c37777c76496ebc65046695ca2350a18 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 27.023 T 06-07-2017 IPR022835 Chaperone modulatory protein CbpM LFZ55_RS01180 dbbf3234039d3f70bba2d68607a75e98 110 Gene3D G3DSA:1.10.530.40 12 101 1.6E-17 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 LFZ55_RS01180 dbbf3234039d3f70bba2d68607a75e98 110 SUPERFAMILY SSF53955 5 108 1.69E-22 T 06-07-2017 IPR023346 Lysozyme-like domain LFZ55_RS20935 8b50babb6d4dc22e0c41537312e27347 216 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 28 211 3.6E-75 T 06-07-2017 IPR022293 Integrating conjugative element protein, PFL4693 LFZ55_RS15335 d7a3c2cddc14038c112ebdbf913ed154 204 Pfam PF11140 Protein of unknown function (DUF2913) 14 189 3.2E-30 T 06-07-2017 IPR021316 Protein of unknown function DUF2913 LFZ55_RS17900 4c533ea3b758676678d376e3bd3cf976 377 SUPERFAMILY SSF56935 44 377 3.05E-28 T 06-07-2017 LFZ55_RS17900 4c533ea3b758676678d376e3bd3cf976 377 Gene3D G3DSA:2.40.160.10 44 377 4.6E-35 T 06-07-2017 IPR023614 Porin domain LFZ55_RS00970 1aa551831b89b5e30eda270fe0feaba4 162 SUPERFAMILY SSF141452 3 159 2.48E-40 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS00970 1aa551831b89b5e30eda270fe0feaba4 162 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 158 6.9E-43 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS00970 1aa551831b89b5e30eda270fe0feaba4 162 Gene3D G3DSA:2.30.110.20 1 158 3.5E-31 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS00970 1aa551831b89b5e30eda270fe0feaba4 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 145 2.4E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp LFZ55_RS05660 c0d703e63f21416e274340c5cbe66e52 182 Pfam PF10554 Ash protein family 22 130 2.7E-25 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein LFZ55_RS18050 e68be2a6b9156c0ea95df7f666af2642 171 Pfam PF07445 Primosomal replication protein priC 4 168 4.7E-45 T 06-07-2017 IPR010890 Primosomal replication PriB/PriC LFZ55_RS16140 a88534b04e22f152a55b502ee068b861 197 Pfam PF09684 Phage tail protein (Tail_P2_I) 43 136 1.1E-4 T 06-07-2017 IPR006521 Tail protein I LFZ55_RS11800 457a39b40e3a1173bf289fc64998c438 150 Pfam PF03245 Bacteriophage Rz lysis protein 32 149 1.8E-27 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 LFZ55_RS13800 6f1a9c6c4e79a15bbec65e1a6c839a70 175 Pfam PF04073 Aminoacyl-tRNA editing domain 34 157 1.5E-23 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS13800 6f1a9c6c4e79a15bbec65e1a6c839a70 175 SUPERFAMILY SSF55826 13 162 6.54E-34 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS13800 6f1a9c6c4e79a15bbec65e1a6c839a70 175 Gene3D G3DSA:3.90.960.10 12 161 5.3E-31 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LFZ55_RS13580 6bc8300109796b1608f26d29c55c7b1b 80 Pfam PF10729 Cell division activator CedA 2 78 1.1E-48 T 06-07-2017 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 LFZ55_RS13580 6bc8300109796b1608f26d29c55c7b1b 80 Hamap MF_01580 Cell division activator CedA [cedA]. 1 80 34.615 T 06-07-2017 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 LFZ55_RS09360 a76462e85ea730c7461a480ed37a9d16 222 Gene3D G3DSA:3.50.30.40 14 181 1.0E-44 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS09360 a76462e85ea730c7461a480ed37a9d16 222 SUPERFAMILY SSF89562 14 183 6.28E-42 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS09360 a76462e85ea730c7461a480ed37a9d16 222 Pfam PF03737 Demethylmenaquinone methyltransferase 16 172 2.8E-35 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LFZ55_RS24560 e7adcd4a86590d1e1fc133531938e357 460 Pfam PF06864 Pilin accessory protein (PilO) 31 453 2.2E-80 T 06-07-2017 IPR009663 Pilin accessory predicted LFZ55_RS12260 51095df4b12f024b30b72b367bd993fe 341 SUPERFAMILY SSF53098 7 168 2.12E-14 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS12260 51095df4b12f024b30b72b367bd993fe 341 Gene3D G3DSA:3.30.420.10 5 167 9.5E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS05485 ff5e0215ff8b1e1cec153b40107d49a8 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 4.1E-143 T 06-07-2017 IPR002823 Protein of unknown function DUF112, transmembrane LFZ55_RS03495 46b67a91cb52c4d6bfcc12d38acdc1af 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 1.8E-18 T 06-07-2017 IPR005614 NrfD family LFZ55_RS11940 93c70c736b4234217ccc0c32bcd0dc27 392 TIGRFAM TIGR00843 benE: benzoate transporter 1 382 1.5E-173 T 06-07-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LFZ55_RS11940 93c70c736b4234217ccc0c32bcd0dc27 392 Pfam PF03594 Benzoate membrane transport protein 8 379 2.3E-145 T 06-07-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LFZ55_RS21960 e249cb514d6a589b185bca767331d3a4 265 Pfam PF02432 Fimbrial, major and minor subunit 32 264 4.1E-66 T 06-07-2017 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 LFZ55_RS23935 f1d09c20219640fb2600e78ded7c8312 112 Pfam PF04219 Protein of unknown function, DUF 10 98 2.7E-39 T 06-07-2017 IPR007335 Protein of unknown function DUF413 LFZ55_RS20740 3f4f37666db83b1d5e2f4630928aebc1 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 1.1E-45 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS20740 3f4f37666db83b1d5e2f4630928aebc1 157 SUPERFAMILY SSF52728 3 155 6.41E-45 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS20740 3f4f37666db83b1d5e2f4630928aebc1 157 Gene3D G3DSA:3.40.35.10 3 156 6.8E-51 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LFZ55_RS06700 994bb43344b35d8c3f7e2ce114cb00f0 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 1.0E-29 T 06-07-2017 IPR022576 Protein of unknown function DUF2633 LFZ55_RS06700 994bb43344b35d8c3f7e2ce114cb00f0 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 2.3E-32 T 06-07-2017 IPR022576 Protein of unknown function DUF2633 LFZ55_RS16175 77a548b4f3a4b1070edf848d483853e0 113 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 106 3.4E-11 T 06-07-2017 LFZ55_RS16175 77a548b4f3a4b1070edf848d483853e0 113 SUPERFAMILY SSF55166 13 107 4.71E-16 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 LFZ55_RS14665 ec6683b1fb671dcba6798a6ff86937ac 89 Pfam PF05488 PAAR motif 10 80 3.6E-18 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS16235 4dc00178316a149e6cb2268079c421d2 107 Pfam PF04606 Ogr/Delta-like zinc finger 25 71 2.6E-19 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type LFZ55_RS09140 cd60854bcb3a910987cbe752eda9d6d9 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 216 2.2E-57 T 06-07-2017 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 LFZ55_RS09140 cd60854bcb3a910987cbe752eda9d6d9 225 Pfam PF02361 Cobalt transport protein 10 221 1.2E-59 T 06-07-2017 IPR003339 ABC/ECF transporter, transmembrane component LFZ55_RS11535 efd98e18a2c95a929039fd3d81c6797b 325 Pfam PF11924 Invasin beta-domain of outer membrane 2 157 1.8E-51 T 06-07-2017 IPR024519 Invasin beta-domain of outer membrane LFZ55_RS11535 efd98e18a2c95a929039fd3d81c6797b 325 PRINTS PR01369 Intimin signature 10 25 3.8E-5 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS11535 efd98e18a2c95a929039fd3d81c6797b 325 PRINTS PR01369 Intimin signature 192 204 3.8E-5 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS11535 efd98e18a2c95a929039fd3d81c6797b 325 PRINTS PR01369 Intimin signature 38 57 3.8E-5 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 LFZ55_RS00450 a75ca1ba0b8e9e8f35ff64e8c70bb73e 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 7 245 1.0E-79 T 06-07-2017 LFZ55_RS13845 50ae4f194ea4b9afb9b27a6a33452663 82 Pfam PF04226 Transglycosylase associated protein 33 81 3.8E-16 T 06-07-2017 IPR007341 Transglycosylase-associated protein GO:0016021 LFZ55_RS02185 4698f5bf9e3cbf89f6da95e94c63887e 89 Pfam PF03889 Domain of unknown function 9 45 6.4E-22 T 06-07-2017 IPR005589 Protein of unknown function DUF331 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 Pfam PF01311 Bacterial export proteins, family 1 15 235 2.5E-48 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 2.6E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.6E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.6E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 2.6E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LFZ55_RS04970 de0b620d0fbe74a27c4aae01fd1fdd02 263 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 8 251 1.2E-79 T 06-07-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 LFZ55_RS08940 6eb6c580624a72cb128b4fd738751bad 155 SUPERFAMILY SSF55136 1 155 7.06E-43 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS08940 6eb6c580624a72cb128b4fd738751bad 155 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 40.512 T 06-07-2017 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 LFZ55_RS08940 6eb6c580624a72cb128b4fd738751bad 155 SMART SM00871 1 153 4.1E-31 T 06-07-2017 IPR010499 Bacterial transcription activator, effector binding LFZ55_RS08940 6eb6c580624a72cb128b4fd738751bad 155 Gene3D G3DSA:3.20.80.10 1 155 1.2E-50 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain LFZ55_RS08940 6eb6c580624a72cb128b4fd738751bad 155 Pfam PF06445 GyrI-like small molecule binding domain 1 153 9.6E-29 T 06-07-2017 IPR029442 GyrI-like small molecule binding domain LFZ55_RS13825 dfb8c201fceec1ab8c9cea322aa79044 115 Pfam PF04343 Protein of unknown function, DUF488 5 112 4.4E-31 T 06-07-2017 IPR007438 Protein of unknown function DUF488 LFZ55_RS10285 baf7a4f6f1a6595a29e3eebbc99558ea 165 Gene3D G3DSA:3.30.450.40 2 152 2.1E-48 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS10285 baf7a4f6f1a6595a29e3eebbc99558ea 165 Pfam PF13185 GAF domain 30 151 1.3E-12 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS10285 baf7a4f6f1a6595a29e3eebbc99558ea 165 SUPERFAMILY SSF55781 2 149 2.84E-39 T 06-07-2017 IPR029016 GAF domain-like LFZ55_RS10285 baf7a4f6f1a6595a29e3eebbc99558ea 165 SMART SM00065 23 161 1.7E-10 T 06-07-2017 IPR003018 GAF domain GO:0005515 LFZ55_RS17960 33ad038a90f1f35a594b57cca4c70cc7 264 Pfam PF01963 TraB family 33 264 8.0E-38 T 06-07-2017 IPR002816 Pheromone shutdown, TraB LFZ55_RS16550 a1072698ae3f19ca216a7b6f18e8ca79 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 2.4E-67 T 06-07-2017 IPR021303 Uncharacterised protein family, inner membrane, YbhQ LFZ55_RS19845 d5a62ba64727fc55f5e91a7be4e19d24 40 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 3 37 4.1E-9 T 06-07-2017 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 LFZ55_RS20675 5c5fbee14b0279803c9bd93139edb578 153 Pfam PF07670 Nucleoside recognition 27 90 3.7E-9 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 LFZ55_RS17315 abb9f60193dd23d3498ee38c304c67f5 157 Pfam PF07295 Zinc-ribbon containing domain 14 154 4.9E-53 T 06-07-2017 IPR009912 Zinc-ribbon containing domain LFZ55_RS03705 49db7a23fb9ca2af892f0f58611581e8 557 SUPERFAMILY SSF52540 27 156 8.69E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LFZ55_RS18585 26b46af425249b83d06543b3fbe5118e 483 SUPERFAMILY SSF103378 13 482 2.22E-160 T 06-07-2017 IPR005656 MmgE/PrpD GO:0016829 LFZ55_RS18585 26b46af425249b83d06543b3fbe5118e 483 Gene3D G3DSA:3.30.1330.120 287 426 1.4E-63 T 06-07-2017 LFZ55_RS18585 26b46af425249b83d06543b3fbe5118e 483 Pfam PF03972 MmgE/PrpD family 18 462 2.6E-159 T 06-07-2017 IPR005656 MmgE/PrpD GO:0016829 LFZ55_RS18585 26b46af425249b83d06543b3fbe5118e 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 1.3E-273 T 06-07-2017 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 LFZ55_RS02175 bfea1819e2bfaeed266b4bb4eb24d199 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 71 9.5E-24 T 06-07-2017 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain LFZ55_RS04215 4847f36734b3f8d26db378fe099eb833 120 Gene3D G3DSA:2.40.440.10 40 101 2.6E-4 T 06-07-2017 LFZ55_RS04215 4847f36734b3f8d26db378fe099eb833 120 Pfam PF10908 Protein of unknown function (DUF2778) 21 101 1.2E-10 T 06-07-2017 IPR021225 Protein of unknown function DUF2778 LFZ55_RS14695 f786da888fa09ad4ce0013661454ff23 89 Pfam PF05488 PAAR motif 10 80 7.7E-17 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS14575 d52983029d107560e866253eb9de4838 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 1.2E-34 T 06-07-2017 IPR018893 Type VIII secretion system, CsgF LFZ55_RS21630 1c8929fcc498a6fd99e46e877e22b49f 466 Pfam PF03611 PTS system sugar-specific permease component 15 410 2.2E-123 T 06-07-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LFZ55_RS16410 e2b9acbf167591b97f5e06dc83f9e07f 421 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 4.3E-141 T 06-07-2017 IPR010856 Protein of unknown function DUF1479 LFZ55_RS16410 e2b9acbf167591b97f5e06dc83f9e07f 421 Gene3D G3DSA:2.60.120.330 5 420 7.1E-160 T 06-07-2017 IPR027443 Isopenicillin N synthase-like LFZ55_RS16410 e2b9acbf167591b97f5e06dc83f9e07f 421 SUPERFAMILY SSF51197 5 419 1.56E-153 T 06-07-2017 LFZ55_RS16210 40ec8bef1d73c7e683c34bdd0639056e 233 Pfam PF05944 Phage small terminase subunit 37 165 3.0E-38 T 06-07-2017 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 LFZ55_RS12375 d0cf525afc9c17fd96473e12d6401613 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 54 512 8.5E-207 T 06-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LFZ55_RS12375 d0cf525afc9c17fd96473e12d6401613 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 91 512 7.1E-171 T 06-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LFZ55_RS06805 1245942b1800ee14ca57d8d4056e285a 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 8.7E-139 T 06-07-2017 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative LFZ55_RS12595 ce97be2baead25694aa22f4b758f9d60 395 Pfam PF07690 Major Facilitator Superfamily 13 341 1.7E-26 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LFZ55_RS12595 ce97be2baead25694aa22f4b758f9d60 395 SUPERFAMILY SSF103473 6 387 8.11E-43 T 06-07-2017 IPR020846 Major facilitator superfamily domain LFZ55_RS12595 ce97be2baead25694aa22f4b758f9d60 395 Gene3D G3DSA:1.20.1250.20 204 386 1.5E-8 T 06-07-2017 LFZ55_RS12595 ce97be2baead25694aa22f4b758f9d60 395 Gene3D G3DSA:1.20.1250.20 7 180 4.0E-23 T 06-07-2017 LFZ55_RS24400 26b4ec2d4494233ac90e91915f864670 431 Pfam PF03743 Bacterial conjugation TrbI-like protein 202 352 5.0E-6 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI LFZ55_RS00545 5af2b500c3722c93aaec6b063ae6052b 205 Pfam PF03458 UPF0126 domain 91 164 1.7E-21 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 LFZ55_RS00545 5af2b500c3722c93aaec6b063ae6052b 205 Pfam PF03458 UPF0126 domain 5 79 1.1E-18 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 LFZ55_RS02545 b553f8f5b069165fa270c393c65c5e56 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 3.3E-71 T 06-07-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LFZ55_RS12420 d9306e8e4afb1be63f2be0fd4f13a1c8 358 SUPERFAMILY SSF111337 1 352 4.58E-83 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS12420 d9306e8e4afb1be63f2be0fd4f13a1c8 358 Pfam PF02547 Queuosine biosynthesis protein 6 351 2.0E-74 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 LFZ55_RS12420 d9306e8e4afb1be63f2be0fd4f13a1c8 358 Gene3D G3DSA:3.40.1780.10 2 68 2.9E-69 T 06-07-2017 LFZ55_RS12420 d9306e8e4afb1be63f2be0fd4f13a1c8 358 Gene3D G3DSA:3.40.1780.10 185 352 2.9E-69 T 06-07-2017 LFZ55_RS11395 118a55b4fc021480eda154d1a4b76832 222 Pfam PF04012 PspA/IM30 family 2 216 1.7E-48 T 06-07-2017 IPR007157 PspA/IM30 LFZ55_RS11395 118a55b4fc021480eda154d1a4b76832 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 8.1E-93 T 06-07-2017 IPR014319 Phage shock protein, PspA LFZ55_RS23660 8d40c71f2f3de143815395fc1547b5fe 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 8.5E-14 T 06-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 LFZ55_RS23660 8d40c71f2f3de143815395fc1547b5fe 155 SUPERFAMILY SSF54637 12 154 1.11E-24 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS23660 8d40c71f2f3de143815395fc1547b5fe 155 Pfam PF03061 Thioesterase superfamily 57 145 5.6E-19 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 LFZ55_RS23660 8d40c71f2f3de143815395fc1547b5fe 155 Gene3D G3DSA:3.10.129.10 17 154 5.8E-30 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS20595 6883ad9b288cda8f2cf4e8df273a7e75 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 487 614 2.8E-34 T 06-07-2017 IPR025299 CstA, C-terminal domain LFZ55_RS20595 6883ad9b288cda8f2cf4e8df273a7e75 716 Pfam PF02554 Carbon starvation protein CstA 34 405 4.0E-161 T 06-07-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 LFZ55_RS06670 74c1d59af4c783c548e70e9895f00655 377 Pfam PF01757 Acyltransferase family 6 336 1.1E-25 T 06-07-2017 IPR002656 Acyltransferase 3 GO:0016747 LFZ55_RS06545 74c1d59af4c783c548e70e9895f00655 377 Pfam PF01757 Acyltransferase family 6 336 1.1E-25 T 06-07-2017 IPR002656 Acyltransferase 3 GO:0016747 LFZ55_RS10650 258f693e0988a0a95eb37428f112601e 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 295 4.0E-80 T 06-07-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LFZ55_RS06385 eee4f1fdb588d8cc7f2230ffcedf252b 271 Pfam PF13730 Helix-turn-helix domain 18 67 2.1E-8 T 06-07-2017 LFZ55_RS11900 84cd30b95a495e288bbbbe6c6240c38f 437 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 5 410 1.7E-207 T 06-07-2017 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 LFZ55_RS11900 84cd30b95a495e288bbbbe6c6240c38f 437 Pfam PF03611 PTS system sugar-specific permease component 4 385 1.1E-64 T 06-07-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LFZ55_RS11900 84cd30b95a495e288bbbbe6c6240c38f 437 PIRSF PIRSF006304 1 436 1.1E-157 T 06-07-2017 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 LFZ55_RS05680 112966f4696e5d4c893506e4c00e5342 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 187 8.7E-85 T 06-07-2017 IPR010006 Bacteriophage P4, Psu, polarity suppression protein LFZ55_RS10900 721e77d9a6e218adfbfa01e97dea4a2f 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 3 365 9.5E-121 T 06-07-2017 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 LFZ55_RS10900 721e77d9a6e218adfbfa01e97dea4a2f 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 1.3E-14 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 LFZ55_RS10900 721e77d9a6e218adfbfa01e97dea4a2f 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 6.8E-8 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 LFZ55_RS14315 a8056bf440be9d4d59451cfbf7af6c54 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.2E-18 T 06-07-2017 IPR003772 Protein of unknown function DUF177 LFZ55_RS07360 4929f21ec34f68fbbfebf5af9017660f 91 Pfam PF08891 YfcL protein 4 86 1.9E-35 T 06-07-2017 IPR014987 Uncharacterised protein family YfcL LFZ55_RS09605 bddc0f94e31618b228115efc725ea2d8 137 Pfam PF13987 YedD-like protein 25 129 2.7E-54 T 06-07-2017 IPR025596 YedD-like protein LFZ55_RS14960 ec8f618569279860ade33f6397390d32 120 PIRSF PIRSF007036 1 114 3.6E-58 T 06-07-2017 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 LFZ55_RS14960 ec8f618569279860ade33f6397390d32 120 Hamap MF_01199 Anti-adapter protein IraM [iraM]. 1 110 30.391 T 06-07-2017 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 LFZ55_RS25000 3e6c4b5559af72ec59e33c8d558fbb49 286 Pfam PF01051 Initiator Replication protein 19 270 8.4E-26 T 06-07-2017 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 LFZ55_RS13285 d7a81548f611d62135015f64116724c8 70 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 2.4E-32 T 06-07-2017 IPR024493 Protein of unknown function DUF2767 LFZ55_RS13285 d7a81548f611d62135015f64116724c8 70 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 68 2.0E-31 T 06-07-2017 LFZ55_RS08565 b087780f8d8d469e63bcbdd9a83b3a40 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 2.6E-73 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS08565 b087780f8d8d469e63bcbdd9a83b3a40 350 Gene3D G3DSA:3.20.20.70 52 346 1.5E-99 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LFZ55_RS08565 b087780f8d8d469e63bcbdd9a83b3a40 350 SUPERFAMILY SSF51569 56 242 6.59E-65 T 06-07-2017 LFZ55_RS08565 b087780f8d8d469e63bcbdd9a83b3a40 350 SUPERFAMILY SSF51569 270 344 6.59E-65 T 06-07-2017 LFZ55_RS08565 b087780f8d8d469e63bcbdd9a83b3a40 350 SMART SM01133 68 326 1.5E-38 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 LFZ55_RS24755 4d076c0b20a0ca4dcf5b650714e06bbf 293 Pfam PF02387 IncFII RepA protein family 17 275 1.2E-33 T 06-07-2017 IPR003446 Plasmid replication initiation, RepA GO:0006276 LFZ55_RS24755 4d076c0b20a0ca4dcf5b650714e06bbf 293 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 15 288 2.6E-176 T 06-07-2017 IPR017837 Plasmid replication initiator, RepA, IncFII type LFZ55_RS20855 daa52e2fbc2befacd51cd018921a1485 179 Pfam PF11198 Protein of unknown function (DUF2857) 6 178 4.1E-64 T 06-07-2017 IPR021364 Protein of unknown function DUF2857 LFZ55_RS20895 70ffc531583e7db9d63efde9a64c61c0 171 Pfam PF11358 Protein of unknown function (DUF3158) 9 157 3.2E-45 T 06-07-2017 IPR021502 Protein of unknown function DUF3158 LFZ55_RS24985 aa9188614cad1705c7760d78d67e00f7 245 Pfam PF06952 PsiA protein 1 237 1.2E-118 T 06-07-2017 IPR009713 Uncharacterised protein family PsiA LFZ55_RS19900 7fdc615f4abea9e4297e3edcba14cc1b 139 Pfam PF15942 Domain of unknown function (DUF4751) 5 125 1.4E-80 T 06-07-2017 IPR031855 Protein of unknown function DUF4751 LFZ55_RS04875 bd3f580487b0d8c58c6abbd828351b55 258 SUPERFAMILY SSF51658 1 256 2.07E-80 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS04875 bd3f580487b0d8c58c6abbd828351b55 258 Gene3D G3DSA:3.20.20.150 1 257 1.8E-85 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS04875 bd3f580487b0d8c58c6abbd828351b55 258 PIRSF PIRSF006241 1 258 6.6E-86 T 06-07-2017 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 LFZ55_RS04875 bd3f580487b0d8c58c6abbd828351b55 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 8.3E-33 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain LFZ55_RS24820 b4714cf7495b410157c9c3c401b220cb 243 Pfam PF05818 Enterobacterial TraT complement resistance protein 32 243 3.9E-84 T 06-07-2017 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 LFZ55_RS24820 b4714cf7495b410157c9c3c401b220cb 243 PIRSF PIRSF002859 1 243 4.2E-147 T 06-07-2017 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 LFZ55_RS10075 48b2cf7f37063467b033bb9b933d6e4c 116 Pfam PF10709 Protein of unknown function (DUF2511) 25 112 8.9E-43 T 06-07-2017 IPR019648 Protein of unknown function DUF2511 LFZ55_RS23710 32fa94de75a210e2b6441d54150cb7c6 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 7 29 1.0E-9 T 06-07-2017 IPR032831 Prokaryotic lipoprotein-attachment site LFZ55_RS24000 00ee5e8ee41224c03fd3a30ad918c654 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.0E-50 T 06-07-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LFZ55_RS14620 fec6b089211cd7b6ee026492d27482c3 194 SUPERFAMILY SSF53098 25 164 4.17E-7 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LFZ55_RS14620 fec6b089211cd7b6ee026492d27482c3 194 Pfam PF01609 Transposase DDE domain 27 134 1.3E-6 T 06-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 LFZ55_RS12680 71ad290ccd20d0b3c36c8fc867564614 73 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 73 2.0E-31 T 06-07-2017 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 LFZ55_RS12680 71ad290ccd20d0b3c36c8fc867564614 73 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 73 2.4E-29 T 06-07-2017 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 LFZ55_RS19280 4a88ed35e5d08592170d1579f59e031c 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 06-07-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 LFZ55_RS19280 4a88ed35e5d08592170d1579f59e031c 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.1E-70 T 06-07-2017 LFZ55_RS17060 7d210f80d18f476df483414b8d072de7 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.5E-35 T 06-07-2017 IPR019663 Uncharacterised protein YbfA LFZ55_RS15605 fbc716c600c6af20724a8f11b07542d1 180 PIRSF PIRSF010252 1 179 5.0E-64 T 06-07-2017 IPR009809 Cell division protein ZapC LFZ55_RS15605 fbc716c600c6af20724a8f11b07542d1 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 175 39.206 T 06-07-2017 IPR009809 Cell division protein ZapC LFZ55_RS15605 fbc716c600c6af20724a8f11b07542d1 180 Pfam PF07126 Cell-division protein ZapC 3 167 2.6E-69 T 06-07-2017 IPR009809 Cell division protein ZapC LFZ55_RS19815 b0815d0d1738d8cd4b666e179f7be29e 28 Pfam PF08054 Leucine operon leader peptide 1 28 1.2E-19 T 06-07-2017 IPR012570 Leucine operon leader peptide GO:0009098 LFZ55_RS09310 cb14adb28987bccb47764e008d1b397d 26 Gene3D G3DSA:1.10.10.10 1 26 1.3E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LFZ55_RS22530 1df5c753ab078602a6eaa9f47ba90e14 305 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 9.1E-51 T 06-07-2017 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 LFZ55_RS23115 4cfbd24a627538a3f1991bb469240dfc 198 Pfam PF07305 Protein of unknown function (DUF1454) 11 192 6.6E-83 T 06-07-2017 IPR009918 Protein of unknown function DUF1454 LFZ55_RS21485 fee215afed72f401586638399dea8c49 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 1.7E-70 T 06-07-2017 IPR007452 Translocation and assembly module TamB LFZ55_RS23375 57977afae7af31ada3af38e6560b09f0 291 Pfam PF01925 Sulfite exporter TauE/SafE 23 249 1.3E-31 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 LFZ55_RS12025 3ec3c486a3c2ecb80c628945650ef7ad 77 Pfam PF10753 Protein of unknown function (DUF2566) 24 77 3.3E-26 T 06-07-2017 IPR019689 Toxin GhoT/OrtT LFZ55_RS24365 02673667fa4947f87edbfb0a735b3406 904 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 217 848 6.6E-127 T 06-07-2017 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY LFZ55_RS21845 ed1a9053e4a7ea049e128f7e67f4b981 48 Pfam PF08085 Entericidin EcnA/B family 23 43 2.6E-8 T 06-07-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 LFZ55_RS20615 736d9c56e255235fb22f7bf8158baf34 213 Pfam PF01810 LysE type translocator 22 205 1.8E-24 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LFZ55_RS10070 6f7be1bc289888b176c9e4f7c4b53ddb 291 Pfam PF05425 Copper resistance protein D 187 284 2.7E-25 T 06-07-2017 IPR008457 Copper resistance protein D GO:0016021 LFZ55_RS24405 370f25e209d2bc88213a6390744ec354 379 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 132 374 3.7E-54 T 06-07-2017 IPR022073 Putative outer membrane core complex of type IVb secretion LFZ55_RS21050 f2dc766a00888110b998cebb23d150ec 455 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 29 448 3.5E-152 T 06-07-2017 IPR021204 Integrating conjugative element protein, PFL4711 LFZ55_RS21435 b7dab0c0d814a34df07ab4d55bd1cd39 439 Pfam PF02321 Outer membrane efflux protein 241 417 1.3E-26 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS21435 b7dab0c0d814a34df07ab4d55bd1cd39 439 Pfam PF02321 Outer membrane efflux protein 32 215 2.2E-11 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LFZ55_RS21435 b7dab0c0d814a34df07ab4d55bd1cd39 439 SUPERFAMILY SSF56954 5 419 2.35E-56 T 06-07-2017 LFZ55_RS21435 b7dab0c0d814a34df07ab4d55bd1cd39 439 Gene3D G3DSA:1.20.1600.10 27 417 1.2E-49 T 06-07-2017 LFZ55_RS10570 ba9b1a89c4cb9f7263b8c88aa4251975 29 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.5E-11 T 06-07-2017 IPR012994 Membrane bound YbgT-like LFZ55_RS18945 537d380eacf18cbc7742b53ce9a983b1 745 Gene3D G3DSA:4.10.820.10 497 543 2.7E-7 T 06-07-2017 IPR003536 Translocated intimin receptor, central domain GO:0005515 LFZ55_RS18945 537d380eacf18cbc7742b53ce9a983b1 745 Pfam PF03549 Translocated intimin receptor (Tir) intimin-binding domain 496 543 1.3E-6 T 06-07-2017 IPR003536 Translocated intimin receptor, central domain GO:0005515 LFZ55_RS16215 295166508384c8f75c1fc812e88c6ead 340 Pfam PF05125 Phage major capsid protein, P2 family 12 326 7.8E-106 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 LFZ55_RS16215 295166508384c8f75c1fc812e88c6ead 340 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 326 1.1E-91 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 LFZ55_RS08525 06eb98c0950b073a23a0b9b044a12c27 276 Gene3D G3DSA:2.60.40.1090 135 276 1.6E-15 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS08525 06eb98c0950b073a23a0b9b044a12c27 276 SUPERFAMILY SSF49401 134 276 3.43E-15 T 06-07-2017 IPR008966 Adhesion domain LFZ55_RS08525 06eb98c0950b073a23a0b9b044a12c27 276 Pfam PF00419 Fimbrial protein 127 275 3.3E-14 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LFZ55_RS05490 9fd37205c038b70505bc4e020d87881e 144 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 138 1.7E-19 T 06-07-2017 IPR009936 Protein of unknown function DUF1468 LFZ55_RS05085 01232a2241ba4d2e7aa028f0c4c7fafd 302 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 40 212 1.1E-58 T 06-07-2017 IPR005083 Serine/Threonine acetyltransferase, YopJ LFZ55_RS00250 589122dce0bcdc578b04f1bf02f162b7 32 Pfam PF08049 IlvB leader peptide 1 32 3.1E-17 T 06-07-2017 IPR012566 IlvB leader peptide LFZ55_RS16200 7bfa076e27d52348833d1e95b85a73b8 168 Pfam PF06891 P2 phage tail completion protein R (GpR) 5 139 7.6E-27 T 06-07-2017 IPR009678 Bacteriophage tail completion protein R LFZ55_RS13690 1228eedab681a934cf6e4bb045fbb405 91 Pfam PF07383 Protein of unknown function (DUF1496) 38 90 1.5E-25 T 06-07-2017 IPR009971 Protein of unknown function DUF1496 LFZ55_RS23740 477f3c5a01f7bd489c3d65fc9eec4bec 389 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 36 363 6.2E-133 T 06-07-2017 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX LFZ55_RS08705 78a2bed40dcf10436fd7ce591ec316be 404 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 404 1.4E-261 T 06-07-2017 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD LFZ55_RS19875 be8ea38d10063091c6af979e2c7740e5 255 Pfam PF09335 SNARE associated Golgi protein 36 159 2.1E-19 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS01150 2308be7d09cd2f7056abc8cb3321d8e4 686 Pfam PF05170 AsmA family 1 582 1.6E-177 T 06-07-2017 IPR007844 AsmA LFZ55_RS07630 ae2546217a977512b2d160287b99647a 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.816 T 06-07-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 LFZ55_RS07630 ae2546217a977512b2d160287b99647a 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 1.0E-30 T 06-07-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS24835 67ad382010800d5f235141c36672e1a3 460 Pfam PF06122 Conjugative relaxosome accessory transposon protein 32 380 1.1E-118 T 06-07-2017 IPR010927 Type IV conjugative transfer system protein TraH LFZ55_RS10275 b96c88b867bb77b570008d973da4117d 879 Pfam PF02470 MlaD protein 749 812 3.6E-10 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS10275 b96c88b867bb77b570008d973da4117d 879 Pfam PF02470 MlaD protein 48 139 8.5E-16 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS10275 b96c88b867bb77b570008d973da4117d 879 Pfam PF02470 MlaD protein 282 355 1.8E-7 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS10275 b96c88b867bb77b570008d973da4117d 879 Pfam PF02470 MlaD protein 165 222 6.4E-7 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS10275 b96c88b867bb77b570008d973da4117d 879 Pfam PF02470 MlaD protein 638 726 5.2E-9 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS08895 115d5a4081836103ad363b4a5bd0f9dd 16 Pfam PF08047 Histidine operon leader peptide 1 16 4.4E-10 T 06-07-2017 IPR012565 Histidine operon leader peptide GO:0000105 LFZ55_RS03665 e1db611b6081f181b8f4fc945f8ea55e 175 Gene3D G3DSA:3.10.129.10 18 165 3.4E-43 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS03665 e1db611b6081f181b8f4fc945f8ea55e 175 SUPERFAMILY SSF54637 16 166 5.97E-47 T 06-07-2017 IPR029069 HotDog domain LFZ55_RS03665 e1db611b6081f181b8f4fc945f8ea55e 175 Pfam PF01575 MaoC like domain 29 137 4.0E-19 T 06-07-2017 IPR002539 MaoC-like domain LFZ55_RS16985 66601f1b236874d2b902f55f258b8987 256 Pfam PF01061 ABC-2 type transporter 13 217 1.7E-21 T 06-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 LFZ55_RS12045 0fdd39407f6125eebbbc4f4eb5258684 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 3.2E-43 T 06-07-2017 IPR019671 Protein of unknown function DUF2526 LFZ55_RS10675 9780921f998beee5fa2ee6ec1deeec8b 493 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 67 405 4.2E-87 T 06-07-2017 IPR016624 Uncharacterised conserved protein UCP014753 LFZ55_RS08205 e105d420084801c8ae284d0058247336 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 56 4.0E-5 T 06-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein LFZ55_RS24540 4af8590108f46e1feba0d76e2021b41e 158 Pfam PF05713 Bacterial mobilisation protein (MobC) 105 146 2.6E-5 T 06-07-2017 IPR008687 Bacterial mobilisation LFZ55_RS15095 2debcbf1b8b38af53fa90964de5d1ab9 195 SUPERFAMILY SSF56925 54 194 9.42E-14 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LFZ55_RS12370 4e672a5a8e9a5699eadb83e332fd187f 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 9.2E-116 T 06-07-2017 IPR010263 Type VI secretion protein, VC_A0114 LFZ55_RS12370 4e672a5a8e9a5699eadb83e332fd187f 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 446 8.2E-120 T 06-07-2017 IPR010263 Type VI secretion protein, VC_A0114 LFZ55_RS14750 599f73fa646457e179f689570e3fa5ff 351 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 310 7.7E-26 T 06-07-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 LFZ55_RS23315 d21789cfdd52cb4f48e67d3e9fb11e00 103 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 21 93 2.9E-21 T 06-07-2017 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 LFZ55_RS13930 4e8ea963c33e74eff84ec7a917b10aad 108 Pfam PF03860 Domain of Unknown Function (DUF326) 86 106 5.3E-6 T 06-07-2017 IPR005560 Protein of unknown function DUF326 LFZ55_RS13930 4e8ea963c33e74eff84ec7a917b10aad 108 Pfam PF03860 Domain of Unknown Function (DUF326) 64 84 5.9E-5 T 06-07-2017 IPR005560 Protein of unknown function DUF326 LFZ55_RS01060 6a778c138d09873a5b1fe9682ea0449c 432 Pfam PF03222 Tryptophan/tyrosine permease family 30 410 8.2E-6 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 LFZ55_RS22065 ba405b852f29c56502cfeda1459fcf75 466 Pfam PF09362 Domain of unknown function (DUF1996) 40 265 1.8E-38 T 06-07-2017 IPR018535 Domain of unknown function DUF1996 LFZ55_RS15255 bb5ee5a24ed2e06fb2b874a70207f79d 86 Pfam PF05488 PAAR motif 8 77 5.5E-18 T 06-07-2017 IPR008727 PAAR motif LFZ55_RS15580 2228ed0afe2ad159482675fe8e1b6b58 546 Pfam PF02470 MlaD protein 158 222 1.2E-7 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS15580 2228ed0afe2ad159482675fe8e1b6b58 546 Pfam PF02470 MlaD protein 285 389 2.6E-14 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS15580 2228ed0afe2ad159482675fe8e1b6b58 546 Pfam PF02470 MlaD protein 42 133 2.8E-9 T 06-07-2017 IPR003399 Mce/MlaD LFZ55_RS10260 6d2bb8fedf91c121ddfbaf9145d5f21d 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 1.1E-34 T 06-07-2017 IPR009954 Protein of unknown function DUF1482 LFZ55_RS15180 543336e7ee729f3538d210adfa59e963 110 Gene3D G3DSA:1.10.443.10 5 94 8.1E-7 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LFZ55_RS16080 68d314b4fa42b88b97dfa770c48a0e59 96 Pfam PF07214 Protein of unknown function (DUF1418) 1 93 1.8E-38 T 06-07-2017 IPR010815 Protein of unknown function DUF1418 LFZ55_RS11100 fcac594a86db9530e24436da17dd97b2 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.9E-98 T 06-07-2017 IPR009627 Uncharacterised protein family UPF0259 LFZ55_RS11100 fcac594a86db9530e24436da17dd97b2 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 247 23.718 T 06-07-2017 IPR009627 Uncharacterised protein family UPF0259 LFZ55_RS14570 67d95d13f507455b61d307be93b53f68 131 Pfam PF10627 Curli assembly protein CsgE 30 130 1.9E-34 T 06-07-2017 IPR018900 Curli assembly protein CsgE LFZ55_RS10555 2eaaa5c98abaf2e515202a31ae39aeb5 84 Pfam PF04226 Transglycosylase associated protein 34 83 2.5E-14 T 06-07-2017 IPR007341 Transglycosylase-associated protein GO:0016021 LFZ55_RS04195 ce077f38df0742825b5f17c624f44455 109 Pfam PF15607 Bacterial toxin 44 17 104 5.9E-17 T 06-07-2017 IPR028946 Bacterial toxin 44 LFZ55_RS21965 2b2dd5a9a5dba72de7c79d26ca5b5fa4 263 Pfam PF02432 Fimbrial, major and minor subunit 29 262 1.0E-15 T 06-07-2017 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 LFZ55_RS13185 6ad69833e75f66dce78bf0904c3c4122 88 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 50 87 3.7E-17 T 06-07-2017 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 LFZ55_RS14510 e8e8ae77d236e009f46151cb2e786e2c 124 Pfam PF13984 MsyB protein 3 124 4.5E-66 T 06-07-2017 IPR025729 MsyB protein LFZ55_RS04245 e16a1cd264cb14e753192709b7856642 210 Pfam PF10938 YfdX protein 44 194 2.0E-41 T 06-07-2017 IPR021236 Uncharacterised protein family YfdX LFZ55_RS22335 74bcb503fcde82ced67221410565ae00 449 Pfam PF00860 Permease family 26 409 5.6E-86 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LFZ55_RS15080 7bdf1708dd38c87b29ffa347539e1e37 37 Pfam PF03400 IS1 transposase 1 27 3.3E-7 T 06-07-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 LFZ55_RS11670 0fb2c4a7501a1f4f8860cebbfce641bf 136 Pfam PF03724 META domain 28 125 1.3E-19 T 06-07-2017 IPR005184 Domain of unknown function DUF306, Meta/HslJ LFZ55_RS13215 e14d08494a89a84e469a595b9a9b87d9 138 Pfam PF09621 Type III secretion system regulator (LcrR) 6 57 1.8E-5 T 06-07-2017 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 LFZ55_RS09755 4831b04d11a0d7ab6b07b056850f9ef0 111 Pfam PF13992 YecR-like lipoprotein 26 98 1.3E-27 T 06-07-2017 IPR025731 YecR-like lipoprotein LFZ55_RS07670 b0ce719d06fb12bccaf0a310d71c09dc 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.0E-33 T 06-07-2017 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LFZ55_RS13540 0970eca4261c9e0d427165242178afa1 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 4.1E-56 T 06-07-2017 IPR007433 Protein of unknown function DUF481 LFZ55_RS03065 40431e9e48132f5a7e8d38a0153a2b63 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 5.2E-23 T 06-07-2017 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III LFZ55_RS03745 b70fc34bf12e8d137e5ece0ecc6c51b8 235 Pfam PF04474 Protein of unknown function (DUF554) 3 227 5.1E-66 T 06-07-2017 IPR007563 Protein of unknown function DUF554 LFZ55_RS03290 49f4583186c6bc3c75509c52059ffd06 58 Pfam PF13260 Protein of unknown function (DUF4051) 1 49 1.0E-27 T 06-07-2017 IPR025125 Protein of unknown function DUF4051 LFZ55_RS24930 97fca2ce375ed3c41300e1b52a6d8f12 178 Pfam PF07296 TraP protein 1 149 3.2E-76 T 06-07-2017 IPR009913 TraP LFZ55_RS16245 b4397f5a42cc076f5e982bd7d38a3674 673 ProDom PD092055 ENDONUCLEASE POSSIBLE PROPHAGE FOR ORFE TRANSPOSABLE FELS-2 RETRON STY4635 ELEMENT 615 659 6.0E-5 T 06-07-2017 IPR020220 Retron, EC67, C-terminal GO:0016788 LFZ55_RS16245 b4397f5a42cc076f5e982bd7d38a3674 673 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 126 502 8.2E-129 T 06-07-2017 IPR008766 Replication gene A protein GO:0006260 LFZ55_RS00440 f2de75c7cc17149244d7febb42de3dae 183 Pfam PF10554 Ash protein family 22 133 2.8E-28 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein LFZ55_RS16885 ae3bc39acadc86764f694fe153babe5d 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 9.3E-174 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LFZ55_RS09490 55995dad32f2168377012054898f4fed 81 Pfam PF09926 Uncharacterized small protein (DUF2158) 29 68 2.8E-7 T 06-07-2017 IPR019226 Protein of unknown function DUF2158 LFZ55_RS24565 e2fc88dacc968517ca69eee07e51e1bd 143 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 27 131 2.8E-17 T 06-07-2017 IPR022753 Type IV pilus biogenesis PilP LFZ55_RS21280 be0819f042c61c0a4d978f823d30bd07 467 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 463 9.8E-131 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 LFZ55_RS14580 8d551a7ea10cff1b959daac859132faf 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 5.5E-80 T 06-07-2017 IPR005534 Curli production assembly/transport component CsgG GO:0030288 LFZ55_RS04535 d2bdcbef2224cad6cb9a9793469b83d7 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 3.7E-23 T 06-07-2017 IPR006696 Protein of unknown function DUF423 LFZ55_RS14720 7f8945e5c03d28cbd7ef2368d8d5c8c9 204 Pfam PF09850 Type VI secretion system protein DotU 5 190 4.9E-24 T 06-07-2017 IPR017732 Type IV / VI secretion system, DotU LFZ55_RS11335 188392913bc10aaf7d7f83d4b5708708 330 Pfam PF13678 NFkB-p65-degrading zinc protease 25 274 5.8E-109 T 06-07-2017 IPR025208 NFkB-p65-degrading zinc protease LFZ55_RS20560 772da335ec68b4c8820194d04b5c8a25 303 Pfam PF06738 Putative threonine/serine exporter 58 297 1.9E-67 T 06-07-2017 IPR010619 Putative threonine/serine exporter LFZ55_RS11365 55f311a731a3ee19c746d46498877211 157 Pfam PF06767 Sif protein 48 133 2.5E-8 T 06-07-2017 IPR010637 Sif LFZ55_RS06760 080abe0a53931c77933b57d9ce032b37 355 Pfam PF01594 Domain of unknown function DUF20 20 345 1.7E-84 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like LFZ55_RS07555 10dd9ad408529b26a32528307c6782d7 463 Pfam PF03611 PTS system sugar-specific permease component 12 408 1.9E-149 T 06-07-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LFZ55_RS13160 68fbce7bddeda47e67e10b7a3631c3a1 122 PIRSF PIRSF034789 3 122 1.1E-55 T 06-07-2017 IPR017033 Type III secretion system apparatus protein SsaM LFZ55_RS05530 64c881a55d1f072a996bb944455c5bcf 310 Pfam PF04393 Protein of unknown function (DUF535) 31 306 2.9E-90 T 06-07-2017 IPR007488 Protein of unknown function DUF535 LFZ55_RS04450 17161907f1e4db550f045cdcc85503a3 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 2.7E-31 T 06-07-2017 IPR019652 Protein of unknown function DUF2509 LFZ55_RS07420 09468d84ba620c703780964358cf301d 219 Pfam PF09335 SNARE associated Golgi protein 49 176 3.3E-26 T 06-07-2017 IPR032816 SNARE associated Golgi protein LFZ55_RS22310 2b3301dbe70beee8742096d12d985804 229 Pfam PF04172 LrgB-like family 14 225 3.2E-67 T 06-07-2017 IPR007300 CidB/LrgB family LFZ55_RS24310 8146d12ce08acef2118e4e500076be22 178 Pfam PF04221 RelB antitoxin 5 50 1.8E-9 T 06-07-2017 IPR007337 RelB antitoxin/Antitoxin DinJ LFZ55_RS10620 f623664c3c1afac4f7c18a8b9eb096f9 421 Pfam PF14468 Protein of unknown function (DUF4427) 284 415 1.4E-70 T 06-07-2017 IPR025216 Domain of unknown function DUF4427 LFZ55_RS21060 0b320cfabc6eba312f54189501c7dc50 492 Pfam PF07916 TraG-like protein, N-terminal region 8 479 6.2E-84 T 06-07-2017 IPR012931 TraG-like, N-terminal LFZ55_RS20580 24bbb8959c45697080a2d9f0da054d12 163 Pfam PF10696 Protein of unknown function (DUF2501) 83 161 1.2E-26 T 06-07-2017 IPR019637 Protein of unknown function DUF2501