locus-tag class description EB778_RS00240 PF00684 DnaJ central domain EB778_RS00240 PF01556 DnaJ C terminal domain EB778_RS00240 PF00226 DnaJ domain EB778_RS00320 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EB778_RS00355 PF03524 Conjugal transfer protein EB778_RS00360 PF03743 Bacterial conjugation TrbI-like protein EB778_RS00365 PF00437 Type II/IV secretion system protein EB778_RS00390 PF01131 DNA topoisomerase EB778_RS00390 PF01751 Toprim domain EB778_RS00395 PF05321 Haemolysin expression modulating protein EB778_RS00400 PF00816 H-NS histone family EB778_RS00405 PF13610 DDE domain EB778_RS00425 PF10609 NUBPL iron-transfer P-loop NTPase EB778_RS00445 PF00884 Sulfatase EB778_RS00445 PF08019 Phosphoethanolamine transferase EptA/EptB EB778_RS00470 PF01051 Initiator Replication protein EB778_RS00475 PF00308 Bacterial dnaA protein EB778_RS00475 PF08299 Bacterial dnaA protein helix-turn-helix EB778_RS00475 PF11638 DnaA N-terminal domain EB778_RS00480 PF02768 DNA polymerase III beta subunit, C-terminal domain EB778_RS00480 PF02767 DNA polymerase III beta subunit, central domain EB778_RS00480 PF00712 DNA polymerase III beta subunit, N-terminal domain EB778_RS00485 PF02463 RecF/RecN/SMC N terminal domain EB778_RS00490 PF00986 DNA gyrase B subunit, carboxyl terminus EB778_RS00490 PF01751 Toprim domain EB778_RS00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS00490 PF18053 DNA gyrase B subunit insert domain EB778_RS00490 PF00204 DNA gyrase B EB778_RS00525 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS00525 PF00672 HAMP domain EB778_RS00525 PF01627 Hpt domain EB778_RS00525 PF00072 Response regulator receiver domain EB778_RS00530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EB778_RS00535 PF00072 Response regulator receiver domain EB778_RS00535 PF00486 Transcriptional regulatory protein, C terminal EB778_RS00540 PF03264 NapC/NirT cytochrome c family, N-terminal region EB778_RS00545 PF00384 Molybdopterin oxidoreductase EB778_RS00545 PF18364 Molybdopterin oxidoreductase N-terminal domain EB778_RS00545 PF01568 Molydopterin dinucleotide binding domain EB778_RS00550 PF02613 Nitrate reductase delta subunit EB778_RS00555 PF14376 Haem-binding domain EB778_RS00555 PF00034 Cytochrome c EB778_RS00555 PF03150 Di-haem cytochrome c peroxidase EB778_RS00560 PF00005 ABC transporter EB778_RS00565 PF03379 CcmB protein EB778_RS00570 PF01578 Cytochrome C assembly protein EB778_RS00575 PF04995 Heme exporter protein D (CcmD) EB778_RS00580 PF03100 CcmE EB778_RS00585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EB778_RS00585 PF01578 Cytochrome C assembly protein EB778_RS00590 PF08534 Redoxin EB778_RS00595 PF03918 Cytochrome C biogenesis protein EB778_RS00600 PF12566 Protein of unknown function (DUF3748) EB778_RS00600 PF07676 WD40-like Beta Propeller Repeat EB778_RS00605 PF07119 Protein of unknown function (DUF1375) EB778_RS00610 PF00011 Hsp20/alpha crystallin family EB778_RS00615 PF00011 Hsp20/alpha crystallin family EB778_RS00620 PF02080 TrkA-C domain EB778_RS00620 PF06826 Predicted Permease Membrane Region EB778_RS00625 PF02656 Domain of unknown function (DUF202) EB778_RS00630 PF02656 Domain of unknown function (DUF202) EB778_RS00640 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS00645 PF02447 GntP family permease EB778_RS00650 PF03466 LysR substrate binding domain EB778_RS00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS00660 PF07690 Major Facilitator Superfamily EB778_RS00670 PF13939 Toxin TisB, type I toxin-antitoxin system EB778_RS00680 PF08049 IlvB leader peptide EB778_RS00685 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS00685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS00685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS00690 PF01842 ACT domain EB778_RS00695 PF08220 DeoR-like helix-turn-helix domain EB778_RS00695 PF00455 DeoR C terminal sensor domain EB778_RS00700 PF00294 pfkB family carbohydrate kinase EB778_RS00705 PF07690 Major Facilitator Superfamily EB778_RS00715 PF00072 Response regulator receiver domain EB778_RS00715 PF00196 Bacterial regulatory proteins, luxR family EB778_RS00720 PF05231 MASE1 EB778_RS00720 PF07730 Histidine kinase EB778_RS00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS00725 PF07690 Major Facilitator Superfamily EB778_RS00730 PF07690 Major Facilitator Superfamily EB778_RS00735 PF06711 Protein of unknown function (DUF1198) EB778_RS00750 PF07690 Major Facilitator Superfamily EB778_RS00755 PF00232 Glycosyl hydrolase family 1 EB778_RS00765 PF00874 PRD domain EB778_RS00765 PF00158 Sigma-54 interaction domain EB778_RS00775 PF03610 PTS system fructose IIA component EB778_RS00775 PF03830 PTS system sorbose subfamily IIB component EB778_RS00780 PF03609 PTS system sorbose-specific iic component EB778_RS00785 PF03613 PTS system mannose/fructose/sorbose family IID component EB778_RS00790 PF03841 L-seryl-tRNA selenium transferase EB778_RS00795 PF07071 KDGP aldolase EB778_RS00800 PF04754 Putative transposase, YhgA-like EB778_RS00805 PF00892 EamA-like transporter family EB778_RS00810 PF02308 MgtC family EB778_RS00815 PF00690 Cation transporter/ATPase, N-terminus EB778_RS00815 PF00689 Cation transporting ATPase, C-terminus EB778_RS00830 PF00857 Isochorismatase family EB778_RS00840 PF00486 Transcriptional regulatory protein, C terminal EB778_RS00850 PF03797 Autotransporter beta-domain EB778_RS00855 PF00196 Bacterial regulatory proteins, luxR family EB778_RS00870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS00870 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS00875 PF13954 PapC N-terminal domain EB778_RS00875 PF13953 PapC C-terminal domain EB778_RS00875 PF00577 Outer membrane usher protein EB778_RS00885 PF00419 Fimbrial protein EB778_RS00895 PF00419 Fimbrial protein EB778_RS00915 PF01055 Glycosyl hydrolases family 31 EB778_RS00915 PF13802 Galactose mutarotase-like EB778_RS00920 PF05170 AsmA family EB778_RS00925 PF00860 Permease family EB778_RS00930 PF03616 Sodium/glutamate symporter EB778_RS00935 PF00270 DEAD/DEAH box helicase EB778_RS00935 PF00271 Helicase conserved C-terminal domain EB778_RS00935 PF17191 RecG wedge domain EB778_RS00940 PF12105 SpoU, rRNA methylase, C-terminal EB778_RS00940 PF00588 SpoU rRNA Methylase family EB778_RS00945 PF13291 ACT domain EB778_RS00945 PF04607 Region found in RelA / SpoT proteins EB778_RS00945 PF02824 TGS domain EB778_RS00950 PF01192 RNA polymerase Rpb6 EB778_RS00955 PF00625 Guanylate kinase EB778_RS00960 PF03120 NAD-dependent DNA ligase OB-fold domain EB778_RS00960 PF01653 NAD-dependent DNA ligase adenylation domain EB778_RS00965 PF03458 UPF0126 domain EB778_RS00975 PF03466 LysR substrate binding domain EB778_RS00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS00980 PF08340 Domain of unknown function (DUF1732) EB778_RS00980 PF03755 YicC-like family, N-terminal region EB778_RS00985 PF03725 3' exoribonuclease family, domain 2 EB778_RS00985 PF01138 3' exoribonuclease family, domain 1 EB778_RS00990 PF00156 Phosphoribosyl transferase domain EB778_RS00995 PF00440 Bacterial regulatory proteins, tetR family EB778_RS01000 PF00692 dUTPase EB778_RS01005 PF04127 DNA / pantothenate metabolism flavoprotein EB778_RS01005 PF02441 Flavoprotein EB778_RS01010 PF04002 RadC-like JAB domain EB778_RS01015 PF00830 Ribosomal L28 family EB778_RS01020 PF00471 Ribosomal protein L33 EB778_RS01025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EB778_RS01025 PF06827 Zinc finger found in FPG and IleRS EB778_RS01025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EB778_RS01030 PF01467 Cytidylyltransferase-like EB778_RS01035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EB778_RS01040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EB778_RS01045 PF13439 Glycosyltransferase Family 4 EB778_RS01045 PF00534 Glycosyl transferases group 1 EB778_RS01065 PF13439 Glycosyltransferase Family 4 EB778_RS01065 PF00534 Glycosyl transferases group 1 EB778_RS01070 PF01501 Glycosyl transferase family 8 EB778_RS01070 PF08437 Glycosyl transferase family 8 C-terminal EB778_RS01075 PF01501 Glycosyl transferase family 8 EB778_RS01075 PF08437 Glycosyl transferase family 8 C-terminal EB778_RS01080 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) EB778_RS01090 PF00534 Glycosyl transferases group 1 EB778_RS01095 PF04932 O-Antigen ligase EB778_RS01100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EB778_RS01105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EB778_RS01110 PF01370 NAD dependent epimerase/dehydratase family EB778_RS01115 PF00155 Aminotransferase class I and II EB778_RS01120 PF00107 Zinc-binding dehydrogenase EB778_RS01120 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS01125 PF00535 Glycosyl transferase family 2 EB778_RS01130 PF04748 Divergent polysaccharide deacetylase EB778_RS01135 PF01551 Peptidase family M23 EB778_RS01140 PF01676 Metalloenzyme superfamily EB778_RS01140 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EB778_RS01145 PF00581 Rhodanese-like domain EB778_RS01150 PF00462 Glutaredoxin EB778_RS01155 PF02556 Preprotein translocase subunit SecB EB778_RS01160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EB778_RS01160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EB778_RS01165 PF06426 Serine acetyltransferase, N-terminal EB778_RS01165 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS01170 PF07690 Major Facilitator Superfamily EB778_RS01175 PF13378 Enolase C-terminal domain-like EB778_RS01175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS01180 PF00356 Bacterial regulatory proteins, lacI family EB778_RS01185 PF00588 SpoU rRNA Methylase family EB778_RS01190 PF01070 FMN-dependent dehydrogenase EB778_RS01195 PF00392 Bacterial regulatory proteins, gntR family EB778_RS01195 PF07729 FCD domain EB778_RS01200 PF02652 L-lactate permease EB778_RS01205 PF13018 Extended Signal Peptide of Type V secretion system EB778_RS01205 PF03895 YadA-like membrane anchor domain EB778_RS01205 PF05662 Coiled stalk of trimeric autotransporter adhesin EB778_RS01205 PF05658 Head domain of trimeric autotransporter adhesin EB778_RS01210 PF11622 Protein of unknown function (DUF3251) EB778_RS01215 PF10928 Protein of unknown function (DUF2810) EB778_RS01225 PF05068 Mannitol repressor EB778_RS01230 PF08125 Mannitol dehydrogenase C-terminal domain EB778_RS01230 PF01232 Mannitol dehydrogenase Rossmann domain EB778_RS01235 PF02378 Phosphotransferase system, EIIC EB778_RS01235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS01235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS01240 PF00043 Glutathione S-transferase, C-terminal domain EB778_RS01240 PF13417 Glutathione S-transferase, N-terminal domain EB778_RS01245 PF12390 Selenocysteine synthase N terminal EB778_RS01245 PF03841 L-seryl-tRNA selenium transferase EB778_RS01250 PF00009 Elongation factor Tu GTP binding domain EB778_RS01250 PF03144 Elongation factor Tu domain 2 EB778_RS01250 PF09107 Elongation factor SelB, winged helix EB778_RS01250 PF09106 Elongation factor SelB, winged helix EB778_RS01255 PF00480 ROK family EB778_RS01260 PF00171 Aldehyde dehydrogenase family EB778_RS01265 PF07944 Beta-L-arabinofuranosidase, GH127 EB778_RS01275 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS01280 PF01261 Xylose isomerase-like TIM barrel EB778_RS01285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EB778_RS01290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS01290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS01295 PF03480 Bacterial extracellular solute-binding protein, family 7 EB778_RS01300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EB778_RS01305 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EB778_RS01310 PF16154 Domain of unknown function (DUF4862) EB778_RS01315 PF04074 YhcH/YjgK/YiaL EB778_RS01320 PF02615 Malate/L-lactate dehydrogenase EB778_RS01325 PF01614 Bacterial transcriptional regulator EB778_RS01325 PF09339 IclR helix-turn-helix domain EB778_RS01330 PF13247 4Fe-4S dicluster domain EB778_RS01335 PF00155 Aminotransferase class I and II EB778_RS01340 PF00128 Alpha amylase, catalytic domain EB778_RS01345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EB778_RS01350 PF12833 Helix-turn-helix domain EB778_RS01360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS01360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS01365 PF05360 yiaA/B two helix domain EB778_RS01370 PF01757 Acyltransferase family EB778_RS01380 PF13983 YsaB-like lipoprotein EB778_RS01385 PF02091 Glycyl-tRNA synthetase alpha subunit EB778_RS01390 PF02092 Glycyl-tRNA synthetase beta subunit EB778_RS01390 PF05746 DALR anticodon binding domain EB778_RS01400 PF00313 'Cold-shock' DNA-binding domain EB778_RS01405 PF01381 Helix-turn-helix EB778_RS01410 PF11254 Protein of unknown function (DUF3053) EB778_RS01415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EB778_RS01415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EB778_RS01420 PF13488 Glycine zipper EB778_RS01420 PF00691 OmpA family EB778_RS01425 PF18364 Molybdopterin oxidoreductase N-terminal domain EB778_RS01425 PF00384 Molybdopterin oxidoreductase EB778_RS01425 PF01568 Molydopterin dinucleotide binding domain EB778_RS01430 PF00583 Acetyltransferase (GNAT) family EB778_RS01435 PF03352 Methyladenine glycosylase EB778_RS01440 PF03797 Autotransporter beta-domain EB778_RS01445 PF00884 Sulfatase EB778_RS01445 PF08019 Phosphoethanolamine transferase EptA/EptB EB778_RS01465 PF00356 Bacterial regulatory proteins, lacI family EB778_RS01475 PF00860 Permease family EB778_RS01480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS01490 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS01490 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS01495 PF00005 ABC transporter EB778_RS01495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS01500 PF00005 ABC transporter EB778_RS01500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS01505 PF03222 Tryptophan/tyrosine permease family EB778_RS01515 PF13940 Toxin Ldr, type I toxin-antitoxin system EB778_RS01520 PF11658 Cellulose biosynthesis protein BcsG EB778_RS01525 PF11120 Cellulose biosynthesis protein BcsF EB778_RS01530 PF10995 Cellulose biosynthesis GIL EB778_RS01535 PF10945 Cellulose biosynthesis protein BcsR EB778_RS01540 PF06564 Cellulose biosynthesis protein BcsQ EB778_RS01545 PF00535 Glycosyl transferase family 2 EB778_RS01545 PF07238 PilZ domain EB778_RS01545 PF03552 Cellulose synthase EB778_RS01550 PF03170 Bacterial cellulose synthase subunit EB778_RS01555 PF01270 Glycosyl hydrolases family 8 EB778_RS01560 PF13176 Tetratricopeptide repeat EB778_RS01560 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) EB778_RS01565 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS01565 PF00672 HAMP domain EB778_RS01565 PF00563 EAL domain EB778_RS01565 PF17154 Gammaproteobacterial periplasmic sensor domain EB778_RS01570 PF00375 Sodium:dicarboxylate symporter family EB778_RS01575 PF00675 Insulinase (Peptidase family M16) EB778_RS01575 PF05193 Peptidase M16 inactive domain EB778_RS01580 PF00294 pfkB family carbohydrate kinase EB778_RS01585 PF00563 EAL domain EB778_RS01590 PF05170 AsmA family EB778_RS01595 PF00083 Sugar (and other) transporter EB778_RS01595 PF07690 Major Facilitator Superfamily EB778_RS01600 PF03631 Virulence factor BrkB EB778_RS01605 PF03466 LysR substrate binding domain EB778_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS01610 PF00196 Bacterial regulatory proteins, luxR family EB778_RS01625 PF01204 Trehalase EB778_RS01630 PF00392 Bacterial regulatory proteins, gntR family EB778_RS01630 PF07702 UTRA domain EB778_RS01635 PF01380 SIS domain EB778_RS01640 PF00294 pfkB family carbohydrate kinase EB778_RS01645 PF03605 Anaerobic c4-dicarboxylate membrane transporter EB778_RS01650 PF17763 Glutaminase/Asparaginase C-terminal domain EB778_RS01650 PF00710 Asparaginase, N-terminal EB778_RS01655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EB778_RS01655 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS01660 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EB778_RS01665 PF01569 PAP2 superfamily EB778_RS01670 PF01432 Peptidase family M3 EB778_RS01675 PF04445 Putative SAM-dependent methyltransferase EB778_RS01680 PF00854 POT family EB778_RS01685 PF00582 Universal stress protein family EB778_RS01690 PF10625 Universal stress protein B (UspB) EB778_RS01695 PF01384 Phosphate transporter family EB778_RS01705 PF13533 Biotin-lipoyl like EB778_RS01710 PF00005 ABC transporter EB778_RS01720 PF08753 NikR C terminal nickel binding domain EB778_RS01720 PF01402 Ribbon-helix-helix protein, copG family EB778_RS01725 PF01648 4'-phosphopantetheinyl transferase superfamily EB778_RS01730 PF01594 AI-2E family transporter EB778_RS01735 PF07690 Major Facilitator Superfamily EB778_RS01740 PF08786 DcrB EB778_RS01745 PF02592 Putative vitamin uptake transporter EB778_RS01750 PF01206 Sulfurtransferase TusA EB778_RS01755 PF00672 HAMP domain EB778_RS01755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS01755 PF02203 Tar ligand binding domain homologue EB778_RS01760 PF00403 Heavy-metal-associated domain EB778_RS01765 PF07947 YhhN family EB778_RS01770 PF10694 Protein of unknown function (DUF2500) EB778_RS01775 PF06611 Protein of unknown function (DUF1145) EB778_RS01785 PF02881 SRP54-type protein, helical bundle domain EB778_RS01785 PF00448 SRP54-type protein, GTPase domain EB778_RS01790 PF00005 ABC transporter EB778_RS01795 PF18075 FtsX extracellular domain EB778_RS01795 PF02687 FtsX-like permease family EB778_RS01800 PF04545 Sigma-70, region 4 EB778_RS01800 PF04542 Sigma-70 region 2 EB778_RS01805 PF13458 Periplasmic binding protein EB778_RS01815 PF12568 Acetyltransferase (GNAT) domain, PanZ EB778_RS01820 PF13458 Periplasmic binding protein EB778_RS01825 PF02653 Branched-chain amino acid transport system / permease component EB778_RS01830 PF02653 Branched-chain amino acid transport system / permease component EB778_RS01830 PF11862 Domain of unknown function (DUF3382) EB778_RS01835 PF12399 Branched-chain amino acid ATP-binding cassette transporter EB778_RS01835 PF00005 ABC transporter EB778_RS01840 PF00005 ABC transporter EB778_RS01850 PF13416 Bacterial extracellular solute-binding protein EB778_RS01855 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS01865 PF00005 ABC transporter EB778_RS01865 PF17912 MalK OB fold domain EB778_RS01870 PF03009 Glycerophosphoryl diester phosphodiesterase family EB778_RS01875 PF10956 Protein of unknown function (DUF2756) EB778_RS01885 PF02126 Phosphotriesterase family EB778_RS01900 PF00294 pfkB family carbohydrate kinase EB778_RS01905 PF00583 Acetyltransferase (GNAT) family EB778_RS01915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EB778_RS01915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS01920 PF17954 Quercetinase C-terminal cupin domain EB778_RS01920 PF02678 Pirin EB778_RS01925 PF00356 Bacterial regulatory proteins, lacI family EB778_RS01925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EB778_RS01930 PF01202 Shikimate kinase EB778_RS01935 PF02447 GntP family permease EB778_RS01940 PF01914 MarC family integral membrane protein EB778_RS01945 PF02774 Semialdehyde dehydrogenase, dimerisation domain EB778_RS01945 PF01118 Semialdehyde dehydrogenase, NAD binding domain EB778_RS01950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EB778_RS01950 PF02806 Alpha amylase, C-terminal all-beta domain EB778_RS01950 PF00128 Alpha amylase, catalytic domain EB778_RS01955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EB778_RS01955 PF00128 Alpha amylase, catalytic domain EB778_RS01955 PF18390 Glycogen debranching enzyme C-terminal domain EB778_RS01960 PF00483 Nucleotidyl transferase EB778_RS01965 PF08323 Starch synthase catalytic domain EB778_RS01965 PF00534 Glycosyl transferases group 1 EB778_RS01970 PF00343 Carbohydrate phosphorylase EB778_RS01975 PF01614 Bacterial transcriptional regulator EB778_RS01975 PF09339 IclR helix-turn-helix domain EB778_RS01980 PF00701 Dihydrodipicolinate synthetase family EB778_RS01985 PF00920 Dehydratase family EB778_RS01990 PF07690 Major Facilitator Superfamily EB778_RS01995 PF00465 Iron-containing alcohol dehydrogenase EB778_RS02010 PF01266 FAD dependent oxidoreductase EB778_RS02010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EB778_RS02015 PF00581 Rhodanese-like domain EB778_RS02020 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EB778_RS02020 PF01694 Rhomboid family EB778_RS02025 PF00455 DeoR C terminal sensor domain EB778_RS02025 PF08220 DeoR-like helix-turn-helix domain EB778_RS02030 PF06956 Regulator of RNA terminal phosphate cyclase EB778_RS02030 PF00158 Sigma-54 interaction domain EB778_RS02040 PF01139 tRNA-splicing ligase RtcB EB778_RS02045 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain EB778_RS02045 PF01137 RNA 3'-terminal phosphate cyclase EB778_RS02050 PF04221 RelB antitoxin EB778_RS02055 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EB778_RS02060 PF17874 MalT-like TPR region EB778_RS02060 PF00196 Bacterial regulatory proteins, luxR family EB778_RS02065 PF00343 Carbohydrate phosphorylase EB778_RS02070 PF02446 4-alpha-glucanotransferase EB778_RS02075 PF02447 GntP family permease EB778_RS02080 PF01521 Iron-sulphur cluster biosynthesis EB778_RS02080 PF01106 NifU-like domain EB778_RS02085 PF00156 Phosphoribosyl transferase domain EB778_RS02090 PF00561 alpha/beta hydrolase fold EB778_RS02095 PF04754 Putative transposase, YhgA-like EB778_RS02100 PF09012 FeoC like transcriptional regulator EB778_RS02105 PF07664 Ferrous iron transport protein B C terminus EB778_RS02105 PF17910 FeoB cytosolic helical domain EB778_RS02105 PF02421 Ferrous iron transport protein B EB778_RS02105 PF07670 Nucleoside recognition EB778_RS02110 PF04023 FeoA domain EB778_RS02115 PF17674 HHH domain EB778_RS02115 PF16921 Tex protein YqgF-like domain EB778_RS02115 PF09371 Tex-like protein N-terminal domain EB778_RS02115 PF00575 S1 RNA binding domain EB778_RS02120 PF01272 Transcription elongation factor, GreA/GreB, C-term EB778_RS02120 PF03449 Transcription elongation factor, N-terminal EB778_RS02125 PF00486 Transcriptional regulatory protein, C terminal EB778_RS02125 PF00072 Response regulator receiver domain EB778_RS02130 PF00672 HAMP domain EB778_RS02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS02130 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS02135 PF01293 Phosphoenolpyruvate carboxykinase EB778_RS02140 PF13687 Domain of unknown function (DUF4153) EB778_RS02145 PF01430 Hsp33 protein EB778_RS02150 PF01479 S4 domain EB778_RS02155 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS02160 PF07095 Intracellular growth attenuator protein IgaA EB778_RS02165 PF00293 NUDIX domain EB778_RS02170 PF17092 Penicillin-binding protein OB-like domain EB778_RS02170 PF00912 Transglycosylase EB778_RS02170 PF00905 Penicillin binding protein transpeptidase domain EB778_RS02180 PF05137 Fimbrial assembly protein (PilN) EB778_RS02190 PF10748 DNA utilization proteins HofP EB778_RS02195 PF00263 Bacterial type II and III secretion system protein EB778_RS02195 PF03958 Bacterial type II/III secretion system short domain EB778_RS02200 PF01202 Shikimate kinase EB778_RS02210 PF05036 Sporulation related domain EB778_RS02215 PF02086 D12 class N6 adenine-specific DNA methyltransferase EB778_RS02220 PF00834 Ribulose-phosphate 3 epimerase family EB778_RS02225 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS02230 PF00579 tRNA synthetases class I (W and Y) EB778_RS02235 PF13978 Protein of unknown function (DUF4223) EB778_RS02250 PF14824 Sirohaem biosynthesis protein central EB778_RS02250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS02250 PF10414 Sirohaem synthase dimerisation region EB778_RS02255 PF01226 Formate/nitrite transporter EB778_RS02260 PF13806 Rieske-like [2Fe-2S] domain EB778_RS02265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EB778_RS02265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EB778_RS02265 PF04324 BFD-like [2Fe-2S] binding domain EB778_RS02265 PF18267 Rubredoxin NAD+ reductase C-terminal domain EB778_RS02265 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS02270 PF07690 Major Facilitator Superfamily EB778_RS02275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EB778_RS02280 PF10832 Protein of unknown function (DUF2559) EB778_RS02285 PF02661 Fic/DOC family EB778_RS02290 PF00117 Glutamine amidotransferase class-I EB778_RS02295 PF00202 Aminotransferase class-III EB778_RS02300 PF12805 FUSC-like inner membrane protein yccS EB778_RS02305 PF13545 Crp-like helix-turn-helix domain EB778_RS02305 PF00027 Cyclic nucleotide-binding domain EB778_RS02310 PF02566 OsmC-like protein EB778_RS02315 PF00485 Phosphoribulokinase / Uridine kinase family EB778_RS02320 PF06794 Uncharacterised protein family (UPF0270) EB778_RS02325 PF00561 alpha/beta hydrolase fold EB778_RS02330 PF08803 Putative mono-oxygenase ydhR EB778_RS02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS02335 PF03466 LysR substrate binding domain EB778_RS02340 PF00005 ABC transporter EB778_RS02340 PF12848 ABC transporter EB778_RS02345 PF02525 Flavodoxin-like fold EB778_RS02350 PF00999 Sodium/hydrogen exchanger family EB778_RS02350 PF02254 TrkA-N domain EB778_RS02355 PF09526 Probable metal-binding protein (DUF2387) EB778_RS02360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EB778_RS02365 PF04102 SlyX EB778_RS02370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EB778_RS02370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EB778_RS02375 PF13309 HTH domain EB778_RS02375 PF08348 YheO-like PAS domain EB778_RS02380 PF02635 DsrE/DsrF-like family EB778_RS02385 PF02635 DsrE/DsrF-like family EB778_RS02390 PF04077 DsrH like protein EB778_RS02395 PF00164 Ribosomal protein S12/S23 EB778_RS02400 PF00177 Ribosomal protein S7p/S5e EB778_RS02405 PF03144 Elongation factor Tu domain 2 EB778_RS02405 PF00009 Elongation factor Tu GTP binding domain EB778_RS02405 PF14492 Elongation Factor G, domain II EB778_RS02405 PF03764 Elongation factor G, domain IV EB778_RS02405 PF00679 Elongation factor G C-terminus EB778_RS02410 PF03144 Elongation factor Tu domain 2 EB778_RS02410 PF00009 Elongation factor Tu GTP binding domain EB778_RS02410 PF03143 Elongation factor Tu C-terminal domain EB778_RS02415 PF04324 BFD-like [2Fe-2S] binding domain EB778_RS02420 PF00210 Ferritin-like domain EB778_RS02425 PF01478 Type IV leader peptidase family EB778_RS02430 PF00338 Ribosomal protein S10p/S20e EB778_RS02435 PF00297 Ribosomal protein L3 EB778_RS02440 PF00573 Ribosomal protein L4/L1 family EB778_RS02445 PF00276 Ribosomal protein L23 EB778_RS02450 PF03947 Ribosomal Proteins L2, C-terminal domain EB778_RS02450 PF00181 Ribosomal Proteins L2, RNA binding domain EB778_RS02455 PF00203 Ribosomal protein S19 EB778_RS02460 PF00237 Ribosomal protein L22p/L17e EB778_RS02465 PF07650 KH domain EB778_RS02465 PF00189 Ribosomal protein S3, C-terminal domain EB778_RS02470 PF00252 Ribosomal protein L16p/L10e EB778_RS02475 PF00831 Ribosomal L29 protein EB778_RS02480 PF00366 Ribosomal protein S17 EB778_RS02485 PF00238 Ribosomal protein L14p/L23e EB778_RS02490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EB778_RS02490 PF00467 KOW motif EB778_RS02495 PF00281 Ribosomal protein L5 EB778_RS02495 PF00673 ribosomal L5P family C-terminus EB778_RS02500 PF00253 Ribosomal protein S14p/S29e EB778_RS02505 PF00410 Ribosomal protein S8 EB778_RS02510 PF00347 Ribosomal protein L6 EB778_RS02515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EB778_RS02520 PF00333 Ribosomal protein S5, N-terminal domain EB778_RS02520 PF03719 Ribosomal protein S5, C-terminal domain EB778_RS02525 PF00327 Ribosomal protein L30p/L7e EB778_RS02530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EB778_RS02535 PF00344 SecY translocase EB778_RS02540 PF00444 Ribosomal protein L36 EB778_RS02545 PF00416 Ribosomal protein S13/S18 EB778_RS02550 PF00411 Ribosomal protein S11 EB778_RS02555 PF01479 S4 domain EB778_RS02555 PF00163 Ribosomal protein S4/S9 N-terminal domain EB778_RS02560 PF01000 RNA polymerase Rpb3/RpoA insert domain EB778_RS02560 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EB778_RS02560 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EB778_RS02565 PF01196 Ribosomal protein L17 EB778_RS02570 PF09350 Domain of unknown function (DUF1992) EB778_RS02575 PF13411 MerR HTH family regulatory protein EB778_RS02580 PF03889 Alternative ribosome-rescue factor A EB778_RS02585 PF01741 Large-conductance mechanosensitive channel, MscL EB778_RS02590 PF02254 TrkA-N domain EB778_RS02590 PF02080 TrkA-C domain EB778_RS02595 PF01029 NusB family EB778_RS02595 PF01189 16S rRNA methyltransferase RsmB/F EB778_RS02600 PF02911 Formyl transferase, C-terminal domain EB778_RS02600 PF00551 Formyl transferase EB778_RS02605 PF01327 Polypeptide deformylase EB778_RS02610 PF02481 DNA recombination-mediator protein A EB778_RS02610 PF17782 DprA winged helix domain EB778_RS02615 PF04361 Protein of unknown function (DUF494) EB778_RS02620 PF01396 Topoisomerase DNA binding C4 zinc finger EB778_RS02625 PF01300 Telomere recombination EB778_RS02630 PF08501 Shikimate dehydrogenase substrate binding domain EB778_RS02630 PF01488 Shikimate / quinate 5-dehydrogenase EB778_RS02630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EB778_RS02635 PF07369 Protein of unknown function (DUF1488) EB778_RS02640 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS02685 PF00873 AcrB/AcrD/AcrF family EB778_RS02690 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS02690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS02695 PF00440 Bacterial regulatory proteins, tetR family EB778_RS02695 PF08361 MAATS-type transcriptional repressor, C-terminal region EB778_RS02700 PF00563 EAL domain EB778_RS02700 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS02700 PF03707 Bacterial signalling protein N terminal repeat EB778_RS02705 PF10831 Protein of unknown function (DUF2556) EB778_RS02710 PF01555 DNA methylase EB778_RS02715 PF02954 Bacterial regulatory protein, Fis family EB778_RS02720 PF01207 Dihydrouridine synthase (Dus) EB778_RS02730 PF00474 Sodium:solute symporter family EB778_RS02735 PF06196 Protein of unknown function (DUF997) EB778_RS02740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EB778_RS02740 PF02785 Biotin carboxylase C-terminal domain EB778_RS02740 PF00289 Biotin carboxylase, N-terminal domain EB778_RS02745 PF00364 Biotin-requiring enzyme EB778_RS02755 PF01794 Ferric reductase like transmembrane component EB778_RS02760 PF00174 Oxidoreductase molybdopterin binding domain EB778_RS02765 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS02765 PF00107 Zinc-binding dehydrogenase EB778_RS02770 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS02770 PF00563 EAL domain EB778_RS02770 PF17157 Gammaproteobacterial periplasmic sensor domain EB778_RS02780 PF04085 rod shape-determining protein MreC EB778_RS02785 PF04093 rod shape-determining protein MreD EB778_RS02790 PF02545 Maf-like protein EB778_RS02795 PF10150 Ribonuclease E/G family EB778_RS02795 PF00575 S1 RNA binding domain EB778_RS02800 PF13502 AsmA-like C-terminal region EB778_RS02800 PF13116 Protein of unknown function EB778_RS02805 PF01523 Putative modulator of DNA gyrase EB778_RS02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS02810 PF03466 LysR substrate binding domain EB778_RS02815 PF07869 Protein of unknown function (DUF1656) EB778_RS02820 PF13533 Biotin-lipoyl like EB778_RS02825 PF04632 Fusaric acid resistance protein family EB778_RS02830 PF01337 Barstar (barnase inhibitor) EB778_RS02835 PF07338 Protein of unknown function (DUF1471) EB778_RS02840 PF07338 Protein of unknown function (DUF1471) EB778_RS02845 PF02863 Arginine repressor, C-terminal domain EB778_RS02845 PF01316 Arginine repressor, DNA binding domain EB778_RS02850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EB778_RS02850 PF00056 lactate/malate dehydrogenase, NAD binding domain EB778_RS02855 PF07702 UTRA domain EB778_RS02855 PF00392 Bacterial regulatory proteins, gntR family EB778_RS02865 PF00939 Sodium:sulfate symporter transmembrane region EB778_RS02870 PF05681 Fumarate hydratase (Fumerase) EB778_RS02875 PF05683 Fumarase C-terminus EB778_RS02880 PF04277 Oxaloacetate decarboxylase, gamma chain EB778_RS02885 PF02436 Conserved carboxylase domain EB778_RS02885 PF00682 HMGL-like EB778_RS02885 PF00364 Biotin-requiring enzyme EB778_RS02890 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EB778_RS02895 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EB778_RS02900 PF13180 PDZ domain EB778_RS02905 PF13180 PDZ domain EB778_RS02905 PF00595 PDZ domain EB778_RS02910 PF06295 Protein of unknown function (DUF1043) EB778_RS02915 PF03969 AFG1-like ATPase EB778_RS02920 PF00572 Ribosomal protein L13 EB778_RS02925 PF00380 Ribosomal protein S9/S16 EB778_RS02935 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS02935 PF00043 Glutathione S-transferase, C-terminal domain EB778_RS02940 PF04386 Stringent starvation protein B EB778_RS02945 PF07729 FCD domain EB778_RS02945 PF00392 Bacterial regulatory proteins, gntR family EB778_RS02950 PF00701 Dihydrodipicolinate synthetase family EB778_RS02955 PF07690 Major Facilitator Superfamily EB778_RS02960 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EB778_RS02965 PF00480 ROK family EB778_RS02970 PF04074 YhcH/YjgK/YiaL EB778_RS02975 PF07969 Amidohydrolase family EB778_RS02980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EB778_RS02985 PF06250 YhcG PDDEXK nuclease domain EB778_RS02985 PF17761 DUF1016 N-terminal domain EB778_RS02990 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS02990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EB778_RS02995 PF04898 Glutamate synthase central domain EB778_RS02995 PF01645 Conserved region in glutamate synthase EB778_RS02995 PF01493 GXGXG motif EB778_RS02995 PF00310 Glutamine amidotransferases class-II EB778_RS03000 PF16199 Radical_SAM C-terminal domain EB778_RS03000 PF04055 Radical SAM superfamily EB778_RS03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS03005 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS03005 PF18415 Histidine kinase receptor ArcB trans-membrane domain EB778_RS03005 PF01627 Hpt domain EB778_RS03005 PF00989 PAS fold EB778_RS03005 PF00072 Response regulator receiver domain EB778_RS03015 PF00912 Transglycosylase EB778_RS03020 PF10707 PhoP regulatory network protein YrbL EB778_RS03025 PF00381 PTS HPr component phosphorylation site EB778_RS03030 PF03668 P-loop ATPase protein family EB778_RS03035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS03040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EB778_RS03045 PF04552 Sigma-54, DNA binding domain EB778_RS03045 PF00309 Sigma-54 factor, Activator interacting domain (AID) EB778_RS03045 PF04963 Sigma-54 factor, core binding domain EB778_RS03050 PF00005 ABC transporter EB778_RS03050 PF12399 Branched-chain amino acid ATP-binding cassette transporter EB778_RS03055 PF03968 OstA-like protein EB778_RS03060 PF06835 Lipopolysaccharide-assembly, LptC-related EB778_RS03070 PF01380 SIS domain EB778_RS03070 PF00571 CBS domain EB778_RS03075 PF01699 Sodium/calcium exchanger protein EB778_RS03080 PF00005 ABC transporter EB778_RS03085 PF02405 Permease MlaE EB778_RS03090 PF02470 MlaD protein EB778_RS03095 PF05494 MlaC protein EB778_RS03100 PF13466 STAS domain EB778_RS03105 PF01722 BolA-like protein EB778_RS03110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EB778_RS03115 PF13693 Winged helix-turn-helix DNA-binding EB778_RS03120 PF00348 Polyprenyl synthetase EB778_RS03125 PF00829 Ribosomal prokaryotic L21 protein EB778_RS03130 PF01016 Ribosomal L27 protein EB778_RS03135 PF00892 EamA-like transporter family EB778_RS03140 PF01926 50S ribosome-binding GTPase EB778_RS03140 PF01018 GTP1/OBG EB778_RS03145 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EB778_RS03150 PF01272 Transcription elongation factor, GreA/GreB, C-term EB778_RS03150 PF03449 Transcription elongation factor, N-terminal EB778_RS03155 PF01985 CRS1 / YhbY (CRM) domain EB778_RS03160 PF01728 FtsJ-like methyltransferase EB778_RS03165 PF06480 FtsH Extracellular EB778_RS03165 PF01434 Peptidase family M41 EB778_RS03165 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS03165 PF17862 AAA+ lid domain EB778_RS03170 PF00809 Pterin binding enzyme EB778_RS03175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EB778_RS03175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EB778_RS03175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EB778_RS03175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EB778_RS03180 PF03840 Preprotein translocase SecG subunit EB778_RS03190 PF01797 Transposase IS200 like EB778_RS03205 PF00764 Arginosuccinate synthase EB778_RS03215 PF02576 RimP N-terminal domain EB778_RS03215 PF17384 RimP C-terminal SH3 domain EB778_RS03220 PF13184 NusA-like KH domain EB778_RS03220 PF08529 NusA N-terminal domain EB778_RS03225 PF00009 Elongation factor Tu GTP binding domain EB778_RS03225 PF11987 Translation-initiation factor 2 EB778_RS03225 PF08364 Bacterial translation initiation factor IF-2 associated region EB778_RS03225 PF04760 Translation initiation factor IF-2, N-terminal region EB778_RS03230 PF02033 Ribosome-binding factor A EB778_RS03235 PF16198 tRNA pseudouridylate synthase B C-terminal domain EB778_RS03235 PF01509 TruB family pseudouridylate synthase (N terminal domain) EB778_RS03235 PF09157 Pseudouridine synthase II TruB, C-terminal EB778_RS03240 PF00312 Ribosomal protein S15 EB778_RS03245 PF00575 S1 RNA binding domain EB778_RS03245 PF03725 3' exoribonuclease family, domain 2 EB778_RS03245 PF01138 3' exoribonuclease family, domain 1 EB778_RS03245 PF00013 KH domain EB778_RS03245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EB778_RS03250 PF13181 Tetratricopeptide repeat EB778_RS03250 PF07719 Tetratricopeptide repeat EB778_RS03260 PF12343 Cold shock protein DEAD box A EB778_RS03260 PF00270 DEAD/DEAH box helicase EB778_RS03260 PF00271 Helicase conserved C-terminal domain EB778_RS03260 PF03880 DbpA RNA binding domain EB778_RS03265 PF03222 Tryptophan/tyrosine permease family EB778_RS03270 PF00296 Luciferase-like monooxygenase EB778_RS03275 PF01136 Peptidase family U32 EB778_RS03280 PF01136 Peptidase family U32 EB778_RS03285 PF02036 SCP-2 sterol transfer family EB778_RS03290 PF13508 Acetyltransferase (GNAT) domain EB778_RS03295 PF01541 GIY-YIG catalytic domain EB778_RS03305 PF01965 DJ-1/PfpI family EB778_RS03310 PF13460 NAD(P)H-binding EB778_RS03315 PF04972 BON domain EB778_RS03320 PF13580 SIS domain EB778_RS03325 PF02021 Uncharacterised protein family UPF0102 EB778_RS03330 PF04348 LppC putative lipoprotein EB778_RS03335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS03340 PF08220 DeoR-like helix-turn-helix domain EB778_RS03345 PF00107 Zinc-binding dehydrogenase EB778_RS03345 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS03350 PF03611 PTS system sugar-specific permease component EB778_RS03355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS03360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS03365 PF08013 Tagatose 6 phosphate kinase EB778_RS03370 PF01116 Fructose-bisphosphate aldolase class-II EB778_RS03375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EB778_RS03375 PF08666 SAF domain EB778_RS03380 PF03328 HpcH/HpaI aldolase/citrate lyase family EB778_RS03385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EB778_RS03385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EB778_RS03390 PF02595 Glycerate kinase family EB778_RS03400 PF03466 LysR substrate binding domain EB778_RS03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS03405 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS03410 PF03222 Tryptophan/tyrosine permease family EB778_RS03415 PF00871 Acetokinase family EB778_RS03420 PF02901 Pyruvate formate lyase-like EB778_RS03420 PF01228 Glycine radical EB778_RS03425 PF03315 Serine dehydratase beta chain EB778_RS03425 PF03313 Serine dehydratase alpha chain EB778_RS03435 PF03313 Serine dehydratase alpha chain EB778_RS03445 PF17954 Quercetinase C-terminal cupin domain EB778_RS03445 PF02678 Pirin EB778_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS03450 PF03466 LysR substrate binding domain EB778_RS03455 PF05656 Protein of unknown function (DUF805) EB778_RS03460 PF13409 Glutathione S-transferase, N-terminal domain EB778_RS03465 PF07681 DoxX EB778_RS03470 PF13997 YqjK-like protein EB778_RS03475 PF07332 Putative Actinobacterial Holin-X, holin superfamily III EB778_RS03480 PF05957 Bacterial protein of unknown function (DUF883) EB778_RS03485 PF06476 Protein of unknown function (DUF1090) EB778_RS03490 PF13721 SecD export protein N-terminal TM region EB778_RS03495 PF09335 SNARE associated Golgi protein EB778_RS03500 PF00375 Sodium:dicarboxylate symporter family EB778_RS03505 PF03741 Integral membrane protein TerC family EB778_RS03510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS03515 PF02698 DUF218 domain EB778_RS03520 PF01863 Protein of unknown function DUF45 EB778_RS03525 PF05175 Methyltransferase small domain EB778_RS03530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EB778_RS03530 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS03535 PF00202 Aminotransferase class-III EB778_RS03540 PF08447 PAS fold EB778_RS03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS03550 PF13610 DDE domain EB778_RS03575 PF00672 HAMP domain EB778_RS03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS03575 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS03580 PF00072 Response regulator receiver domain EB778_RS03580 PF00486 Transcriptional regulatory protein, C terminal EB778_RS03585 PF02321 Outer membrane efflux protein EB778_RS03590 PF11604 Copper binding periplasmic protein CusF EB778_RS03595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS03600 PF00873 AcrB/AcrD/AcrF family EB778_RS03610 PF04945 YHS domain EB778_RS03620 PF01551 Peptidase family M23 EB778_RS03620 PF01476 LysM domain EB778_RS03620 PF08525 Opacity-associated protein A N-terminal motif EB778_RS03630 PF07732 Multicopper oxidase EB778_RS03630 PF07731 Multicopper oxidase EB778_RS03630 PF00394 Multicopper oxidase EB778_RS03635 PF05275 Copper resistance protein B precursor (CopB) EB778_RS03640 PF04234 CopC domain EB778_RS03645 PF05425 Copper resistance protein D EB778_RS03650 PF00072 Response regulator receiver domain EB778_RS03650 PF00486 Transcriptional regulatory protein, C terminal EB778_RS03655 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS03655 PF00672 HAMP domain EB778_RS03685 PF18284 DNA methylase N-terminal domain EB778_RS03685 PF00145 C-5 cytosine-specific DNA methylase EB778_RS03690 PF00565 Staphylococcal nuclease homologue EB778_RS03750 PF00892 EamA-like transporter family EB778_RS03755 PF07690 Major Facilitator Superfamily EB778_RS03760 PF02909 Tetracyclin repressor-like, C-terminal domain EB778_RS03760 PF00440 Bacterial regulatory proteins, tetR family EB778_RS03775 PF13610 DDE domain EB778_RS03790 PF13610 DDE domain EB778_RS03800 PF00893 Small Multidrug Resistance protein EB778_RS03810 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS03815 PF00905 Penicillin binding protein transpeptidase domain EB778_RS03825 PF13610 DDE domain EB778_RS03830 PF02522 Aminoglycoside 3-N-acetyltransferase EB778_RS03840 PF01636 Phosphotransferase enzyme family EB778_RS03850 PF13610 DDE domain EB778_RS03865 PF02332 Methane/Phenol/Toluene Hydroxylase EB778_RS03880 PF00809 Pterin binding enzyme EB778_RS03885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EB778_RS03885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EB778_RS03885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EB778_RS03885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EB778_RS03900 PF03466 LysR substrate binding domain EB778_RS03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS03905 PF07690 Major Facilitator Superfamily EB778_RS03920 PF13610 DDE domain EB778_RS03930 PF01526 Tn3 transposase DDE domain EB778_RS03930 PF13700 Domain of unknown function (DUF4158) EB778_RS03935 PF02796 Helix-turn-helix domain of resolvase EB778_RS03935 PF00239 Resolvase, N terminal domain EB778_RS03940 PF13610 DDE domain EB778_RS03955 PF00873 AcrB/AcrD/AcrF family EB778_RS03960 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS03960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS03965 PF13610 DDE domain EB778_RS03975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EB778_RS03980 PF01526 Tn3 transposase DDE domain EB778_RS03980 PF13700 Domain of unknown function (DUF4158) EB778_RS03995 PF01381 Helix-turn-helix EB778_RS03995 PF07883 Cupin domain EB778_RS04005 PF00809 Pterin binding enzyme EB778_RS04020 PF13610 DDE domain EB778_RS04035 PF00186 Dihydrofolate reductase EB778_RS04045 PF13610 DDE domain EB778_RS04050 PF01636 Phosphotransferase enzyme family EB778_RS04055 PF13610 DDE domain EB778_RS04070 PF00809 Pterin binding enzyme EB778_RS04080 PF00106 short chain dehydrogenase EB778_RS04085 PF13610 DDE domain EB778_RS04095 PF00893 Small Multidrug Resistance protein EB778_RS04100 PF13427 Domain of unknown function (DUF4111) EB778_RS04100 PF01909 Nucleotidyltransferase domain EB778_RS04105 PF07690 Major Facilitator Superfamily EB778_RS04110 PF13427 Domain of unknown function (DUF4111) EB778_RS04120 PF00561 alpha/beta hydrolase fold EB778_RS04125 PF00589 Phage integrase family EB778_RS04125 PF13495 Phage integrase, N-terminal SAM-like domain EB778_RS04135 PF00563 EAL domain EB778_RS04135 PF11809 Domain of unknown function (DUF3330) EB778_RS04140 PF00239 Resolvase, N terminal domain EB778_RS04140 PF02796 Helix-turn-helix domain of resolvase EB778_RS04150 PF13610 DDE domain EB778_RS04155 PF02203 Tar ligand binding domain homologue EB778_RS04155 PF00672 HAMP domain EB778_RS04155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS04160 PF03551 Transcriptional regulator PadR-like family EB778_RS04165 PF08021 Siderophore-interacting FAD-binding domain EB778_RS04165 PF04954 Siderophore-interacting protein EB778_RS04175 PF03167 Uracil DNA glycosylase superfamily EB778_RS04180 PF00140 Sigma-70 factor, region 1.2 EB778_RS04180 PF04542 Sigma-70 region 2 EB778_RS04180 PF04539 Sigma-70 region 3 EB778_RS04180 PF04545 Sigma-70, region 4 EB778_RS04180 PF04546 Sigma-70, non-essential region EB778_RS04180 PF03979 Sigma-70 factor, region 1.1 EB778_RS04185 PF08275 DNA primase catalytic core, N-terminal domain EB778_RS04185 PF08278 DNA primase DnaG DnaB-binding EB778_RS04185 PF10410 DnaB-helicase binding domain of primase EB778_RS04185 PF01807 CHC2 zinc finger EB778_RS04190 PF01165 Ribosomal protein S21 EB778_RS04195 PF00814 Glycoprotease family EB778_RS04210 PF02660 Glycerol-3-phosphate acyltransferase EB778_RS04215 PF02152 Dihydroneopterin aldolase EB778_RS04220 PF02673 Bacitracin resistance protein BacA EB778_RS04225 PF12627 Probable RNA and SrmB- binding site of polymerase A EB778_RS04225 PF01743 Poly A polymerase head domain EB778_RS04225 PF01966 HD domain EB778_RS04230 PF08239 Bacterial SH3 domain EB778_RS04235 PF01928 CYTH domain EB778_RS04240 PF03710 Glutamate-ammonia ligase adenylyltransferase EB778_RS04240 PF08335 GlnD PII-uridylyltransferase EB778_RS04245 PF01467 Cytidylyltransferase-like EB778_RS04245 PF00294 pfkB family carbohydrate kinase EB778_RS04255 PF15975 Flotillin EB778_RS04255 PF01145 SPFH domain / Band 7 family EB778_RS04260 PF07290 Protein of unknown function (DUF1449) EB778_RS04265 PF08971 Glycogen synthesis protein EB778_RS04270 PF04380 Membrane fusogenic activity EB778_RS04275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EB778_RS04280 PF02600 Disulfide bond formation protein DsbB EB778_RS04285 PF01323 DSBA-like thioredoxin domain EB778_RS04290 PF17425 Arylsulfotransferase Ig-like domain EB778_RS04290 PF05935 Arylsulfotransferase (ASST) EB778_RS04295 PF02535 ZIP Zinc transporter EB778_RS04300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EB778_RS04305 PF03738 Glutathionylspermidine synthase preATP-grasp EB778_RS04310 PF06693 Protein of unknown function (DUF1190) EB778_RS04315 PF02321 Outer membrane efflux protein EB778_RS04320 PF00293 NUDIX domain EB778_RS04325 PF06853 Protein of unknown function (DUF1249) EB778_RS04330 PF00149 Calcineurin-like phosphoesterase EB778_RS04335 PF05728 Uncharacterised protein family (UPF0227) EB778_RS04340 PF01751 Toprim domain EB778_RS04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS04340 PF00986 DNA gyrase B subunit, carboxyl terminus EB778_RS04340 PF00204 DNA gyrase B EB778_RS04345 PF03992 Antibiotic biosynthesis monooxygenase EB778_RS04350 PF02525 Flavodoxin-like fold EB778_RS04355 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS04355 PF08521 Two-component sensor kinase N-terminal EB778_RS04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS04360 PF00072 Response regulator receiver domain EB778_RS04360 PF00486 Transcriptional regulatory protein, C terminal EB778_RS04365 PF04076 Bacterial OB fold (BOF) protein EB778_RS04370 PF06445 GyrI-like small molecule binding domain EB778_RS04375 PF03989 DNA gyrase C-terminal domain, beta-propeller EB778_RS04375 PF00521 DNA gyrase/topoisomerase IV, subunit A EB778_RS04380 PF01553 Acyltransferase EB778_RS04385 PF00394 Multicopper oxidase EB778_RS04385 PF07732 Multicopper oxidase EB778_RS04385 PF07731 Multicopper oxidase EB778_RS04390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EB778_RS04400 PF03480 Bacterial extracellular solute-binding protein, family 7 EB778_RS04405 PF08497 Radical SAM N-terminal EB778_RS04405 PF04055 Radical SAM superfamily EB778_RS04405 PF11842 Domain of unknown function (DUF3362) EB778_RS04420 PF00939 Sodium:sulfate symporter transmembrane region EB778_RS04425 PF00248 Aldo/keto reductase family EB778_RS04430 PF00465 Iron-containing alcohol dehydrogenase EB778_RS04435 PF12833 Helix-turn-helix domain EB778_RS04435 PF06719 AraC-type transcriptional regulator N-terminus EB778_RS04440 PF09335 SNARE associated Golgi protein EB778_RS04445 PF01053 Cys/Met metabolism PLP-dependent enzyme EB778_RS04450 PF01618 MotA/TolQ/ExbB proton channel family EB778_RS04455 PF02472 Biopolymer transport protein ExbD/TolR EB778_RS04480 PF03350 Uncharacterized protein family, UPF0114 EB778_RS04485 PF00672 HAMP domain EB778_RS04485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS04485 PF02203 Tar ligand binding domain homologue EB778_RS04490 PF11115 Protein of unknown function (DUF2623) EB778_RS04495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EB778_RS04495 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EB778_RS04500 PF13247 4Fe-4S dicluster domain EB778_RS04505 PF03916 Polysulphide reductase, NrfD EB778_RS04510 PF00374 Nickel-dependent hydrogenase EB778_RS04515 PF01750 Hydrogenase maturation protease EB778_RS04520 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE EB778_RS04525 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EB778_RS04530 PF01455 HupF/HypC family EB778_RS04535 PF01497 Periplasmic binding protein EB778_RS04545 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS04550 PF05257 CHAP domain EB778_RS04550 PF03738 Glutathionylspermidine synthase preATP-grasp EB778_RS04560 PF02614 Glucuronate isomerase EB778_RS04565 PF08125 Mannitol dehydrogenase C-terminal domain EB778_RS04565 PF01232 Mannitol dehydrogenase Rossmann domain EB778_RS04570 PF03786 D-mannonate dehydratase (UxuA) EB778_RS04575 PF07690 Major Facilitator Superfamily EB778_RS04585 PF01522 Polysaccharide deacetylase EB778_RS04595 PF04965 Gene 25-like lysozyme EB778_RS04600 PF00171 Aldehyde dehydrogenase family EB778_RS04605 PF01266 FAD dependent oxidoreductase EB778_RS04615 PF13520 Amino acid permease EB778_RS04625 PF00196 Bacterial regulatory proteins, luxR family EB778_RS04645 PF00175 Oxidoreductase NAD-binding domain EB778_RS04645 PF00970 Oxidoreductase FAD-binding domain EB778_RS04645 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS04650 PF07338 Protein of unknown function (DUF1471) EB778_RS04655 PF02525 Flavodoxin-like fold EB778_RS04660 PF03466 LysR substrate binding domain EB778_RS04675 PF04474 Protein of unknown function (DUF554) EB778_RS04680 PF01276 Orn/Lys/Arg decarboxylase, major domain EB778_RS04680 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EB778_RS04680 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EB778_RS04685 PF03825 Nucleoside H+ symporter EB778_RS04690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EB778_RS04690 PF01464 Transglycosylase SLT domain EB778_RS04695 PF04362 Bacterial Fe(2+) trafficking EB778_RS04700 PF14815 NUDIX domain EB778_RS04700 PF00633 Helix-hairpin-helix motif EB778_RS04700 PF00730 HhH-GPD superfamily base excision DNA repair protein EB778_RS04705 PF02390 Putative methyltransferase EB778_RS04710 PF04320 Protein with unknown function (DUF469) EB778_RS04715 PF11101 Protein of unknown function (DUF2884) EB778_RS04720 PF00710 Asparaginase, N-terminal EB778_RS04720 PF17763 Glutaminase/Asparaginase C-terminal domain EB778_RS04725 PF06717 Protein of unknown function (DUF1202) EB778_RS04730 PF06969 HemN C-terminal domain EB778_RS04730 PF04055 Radical SAM superfamily EB778_RS04735 PF01725 Ham1 family EB778_RS04740 PF02594 Uncharacterised ACR, YggU family COG1872 EB778_RS04745 PF02325 YGGT family EB778_RS04750 PF01168 Alanine racemase, N-terminal domain EB778_RS04755 PF00437 Type II/IV secretion system protein EB778_RS04765 PF03652 Holliday junction resolvase EB778_RS04770 PF02622 Uncharacterized ACR, COG1678 EB778_RS04775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EB778_RS04775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EB778_RS04780 PF04452 RNA methyltransferase EB778_RS04785 PF04231 Endonuclease I EB778_RS04790 PF17283 SprT-like zinc ribbon domain EB778_RS04790 PF10263 SprT-like family EB778_RS04795 PF00083 Sugar (and other) transporter EB778_RS04800 PF00438 S-adenosylmethionine synthetase, N-terminal domain EB778_RS04800 PF02773 S-adenosylmethionine synthetase, C-terminal domain EB778_RS04800 PF02772 S-adenosylmethionine synthetase, central domain EB778_RS04815 PF17810 Arginine decarboxylase helical bundle domain EB778_RS04815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EB778_RS04815 PF17944 Arginine decarboxylase C-terminal helical extension EB778_RS04825 PF00392 Bacterial regulatory proteins, gntR family EB778_RS04825 PF07729 FCD domain EB778_RS04835 PF01232 Mannitol dehydrogenase Rossmann domain EB778_RS04835 PF08125 Mannitol dehydrogenase C-terminal domain EB778_RS04840 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS04840 PF00107 Zinc-binding dehydrogenase EB778_RS04845 PF02615 Malate/L-lactate dehydrogenase EB778_RS04850 PF04074 YhcH/YjgK/YiaL EB778_RS04855 PF12697 Alpha/beta hydrolase family EB778_RS04860 PF00491 Arginase family EB778_RS04865 PF01435 Peptidase family M48 EB778_RS04870 PF00456 Transketolase, thiamine diphosphate binding domain EB778_RS04870 PF02779 Transketolase, pyrimidine binding domain EB778_RS04870 PF02780 Transketolase, C-terminal domain EB778_RS04875 PF01797 Transposase IS200 like EB778_RS04885 PF00005 ABC transporter EB778_RS04890 PF00005 ABC transporter EB778_RS04910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EB778_RS04910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EB778_RS04915 PF00162 Phosphoglycerate kinase EB778_RS04920 PF01116 Fructose-bisphosphate aldolase class-II EB778_RS04925 PF05552 Conserved TM helix EB778_RS04925 PF00924 Mechanosensitive ion channel EB778_RS04930 PF01810 LysE type translocator EB778_RS04935 PF04402 Protein of unknown function (DUF541) EB778_RS04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS04940 PF03466 LysR substrate binding domain EB778_RS04945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EB778_RS04950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EB778_RS04950 PF01842 ACT domain EB778_RS04950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EB778_RS04955 PF01812 5-formyltetrahydrofolate cyclo-ligase family EB778_RS04965 PF05164 Cell division protein ZapA EB778_RS04970 PF03695 Uncharacterised protein family (UPF0149) EB778_RS04975 PF00557 Metallopeptidase family M24 EB778_RS04975 PF05195 Aminopeptidase P, N-terminal domain EB778_RS04980 PF01494 FAD binding domain EB778_RS04985 PF01494 FAD binding domain EB778_RS04990 PF01571 Aminomethyltransferase folate-binding domain EB778_RS04990 PF08669 Glycine cleavage T-protein C-terminal barrel domain EB778_RS04995 PF01597 Glycine cleavage H-protein EB778_RS05000 PF02347 Glycine cleavage system P-protein EB778_RS05015 PF00232 Glycosyl hydrolase family 1 EB778_RS05020 PF04266 ASCH domain EB778_RS05025 PF03006 Haemolysin-III related EB778_RS05030 PF01571 Aminomethyltransferase folate-binding domain EB778_RS05035 PF03937 Flavinator of succinate dehydrogenase EB778_RS05040 PF07254 Membrane-bound toxin component of toxin-antitoxin system EB778_RS05045 PF00258 Flavodoxin EB778_RS05050 PF00589 Phage integrase family EB778_RS05050 PF02899 Phage integrase, N-terminal SAM-like domain EB778_RS05055 PF10411 Disulfide bond isomerase protein N-terminus EB778_RS05055 PF13098 Thioredoxin-like domain EB778_RS05060 PF17768 RecJ OB domain EB778_RS05060 PF01368 DHH family EB778_RS05060 PF02272 DHHA1 domain EB778_RS05070 PF00152 tRNA synthetases class II (D, K and N) EB778_RS05070 PF01336 OB-fold nucleic acid binding domain EB778_RS05075 PF00293 NUDIX domain EB778_RS05085 PF01476 LysM domain EB778_RS05085 PF01551 Peptidase family M23 EB778_RS05110 PF13505 Outer membrane protein beta-barrel domain EB778_RS05125 PF00577 Outer membrane usher protein EB778_RS05125 PF13954 PapC N-terminal domain EB778_RS05125 PF13953 PapC C-terminal domain EB778_RS05130 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS05130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS05150 PF03824 High-affinity nickel-transport protein EB778_RS05155 PF02583 Metal-sensitive transcriptional repressor EB778_RS05160 PF03222 Tryptophan/tyrosine permease family EB778_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS05170 PF03466 LysR substrate binding domain EB778_RS05175 PF00108 Thiolase, N-terminal domain EB778_RS05175 PF02803 Thiolase, C-terminal domain EB778_RS05180 PF04962 KduI/IolB family EB778_RS05190 PF00083 Sugar (and other) transporter EB778_RS05195 PF01177 Asp/Glu/Hydantoin racemase EB778_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS05200 PF03466 LysR substrate binding domain EB778_RS05205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EB778_RS05205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EB778_RS05210 PF00356 Bacterial regulatory proteins, lacI family EB778_RS05215 PF00356 Bacterial regulatory proteins, lacI family EB778_RS05220 PF01553 Acyltransferase EB778_RS05220 PF00501 AMP-binding enzyme EB778_RS05225 PF07690 Major Facilitator Superfamily EB778_RS05230 PF00248 Aldo/keto reductase family EB778_RS05235 PF06004 Bacterial protein of unknown function (DUF903) EB778_RS05240 PF03741 Integral membrane protein TerC family EB778_RS05245 PF02976 DNA mismatch repair enzyme MutH EB778_RS05250 PF00293 NUDIX domain EB778_RS05255 PF02896 PEP-utilising enzyme, TIM barrel domain EB778_RS05255 PF00391 PEP-utilising enzyme, mobile domain EB778_RS05255 PF05524 PEP-utilising enzyme, N-terminal EB778_RS05255 PF01590 GAF domain EB778_RS05260 PF01790 Prolipoprotein diacylglyceryl transferase EB778_RS05265 PF00303 Thymidylate synthase EB778_RS05270 PF07963 Prokaryotic N-terminal methylation motif EB778_RS05275 PF07963 Prokaryotic N-terminal methylation motif EB778_RS05280 PF10713 Protein of unknown function (DUF2509) EB778_RS05285 PF07963 Prokaryotic N-terminal methylation motif EB778_RS05285 PF12528 Type II secretion prepilin peptidase dependent protein C EB778_RS05290 PF17946 RecC C-terminal domain EB778_RS05295 PF00675 Insulinase (Peptidase family M16) EB778_RS05295 PF05193 Peptidase M16 inactive domain EB778_RS05295 PF16187 Middle or third domain of peptidase_M16 EB778_RS05300 PF13361 UvrD-like helicase C-terminal domain EB778_RS05300 PF12705 PD-(D/E)XK nuclease superfamily EB778_RS05300 PF00580 UvrD/REP helicase N-terminal domain EB778_RS05305 PF13538 UvrD-like helicase C-terminal domain EB778_RS05310 PF00583 Acetyltransferase (GNAT) family EB778_RS05310 PF00696 Amino acid kinase family EB778_RS05315 PF11741 AMIN domain EB778_RS05315 PF01520 N-acetylmuramoyl-L-alanine amidase EB778_RS05330 PF03562 MltA specific insert domain EB778_RS05330 PF06725 3D domain EB778_RS05335 PF00899 ThiF family EB778_RS05340 PF00892 EamA-like transporter family EB778_RS05345 PF02657 Fe-S metabolism associated domain EB778_RS05350 PF00266 Aminotransferase class-V EB778_RS05355 PF06004 Bacterial protein of unknown function (DUF903) EB778_RS05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS05360 PF03466 LysR substrate binding domain EB778_RS05365 PF04241 Protein of unknown function (DUF423) EB778_RS05370 PF01728 FtsJ-like methyltransferase EB778_RS05370 PF18125 RlmM ferredoxin-like domain EB778_RS05375 PF00455 DeoR C terminal sensor domain EB778_RS05375 PF08220 DeoR-like helix-turn-helix domain EB778_RS05380 PF05025 RbsD / FucU transport protein family EB778_RS05385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS05385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS05390 PF07881 L-fucose isomerase, first N-terminal domain EB778_RS05390 PF02952 L-fucose isomerase, C-terminal domain EB778_RS05390 PF07882 L-fucose isomerase, second N-terminal domain EB778_RS05395 PF07690 Major Facilitator Superfamily EB778_RS05400 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS05405 PF00465 Iron-containing alcohol dehydrogenase EB778_RS05410 PF01367 5'-3' exonuclease, C-terminal SAM fold EB778_RS05410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EB778_RS05415 PF03315 Serine dehydratase beta chain EB778_RS05415 PF03313 Serine dehydratase alpha chain EB778_RS05425 PF03641 Possible lysine decarboxylase EB778_RS05425 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EB778_RS05425 PF11892 Domain of unknown function (DUF3412) EB778_RS05430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EB778_RS05430 PF14489 QueF-like protein EB778_RS05435 PF07348 Syd protein (SUKH-2) EB778_RS05445 PF04287 tRNA pseudouridine synthase C EB778_RS05450 PF00849 RNA pseudouridylate synthase EB778_RS05455 PF00258 Flavodoxin EB778_RS05465 PF07690 Major Facilitator Superfamily EB778_RS05470 PF13378 Enolase C-terminal domain-like EB778_RS05470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS05475 PF13378 Enolase C-terminal domain-like EB778_RS05480 PF02595 Glycerate kinase family EB778_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS05485 PF00672 HAMP domain EB778_RS05485 PF00072 Response regulator receiver domain EB778_RS05485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EB778_RS05485 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS05485 PF01627 Hpt domain EB778_RS05490 PF01938 TRAM domain EB778_RS05490 PF05958 tRNA (Uracil-5-)-methyltransferase EB778_RS05495 PF13291 ACT domain EB778_RS05495 PF02824 TGS domain EB778_RS05495 PF04607 Region found in RelA / SpoT proteins EB778_RS05500 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EB778_RS05520 PF00419 Fimbrial protein EB778_RS05530 PF00419 Fimbrial protein EB778_RS05535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS05535 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS05540 PF00577 Outer membrane usher protein EB778_RS05540 PF13954 PapC N-terminal domain EB778_RS05540 PF13953 PapC C-terminal domain EB778_RS05545 PF00419 Fimbrial protein EB778_RS05550 PF03819 MazG nucleotide pyrophosphohydrolase domain EB778_RS05555 PF00117 Glutamine amidotransferase class-I EB778_RS05555 PF06418 CTP synthase N-terminus EB778_RS05560 PF03952 Enolase, N-terminal domain EB778_RS05560 PF00113 Enolase, C-terminal TIM barrel domain EB778_RS05565 PF04055 Radical SAM superfamily EB778_RS05570 PF03099 Biotin/lipoate A/B protein ligase family EB778_RS05570 PF12706 Beta-lactamase superfamily domain EB778_RS05575 PF01242 6-pyruvoyl tetrahydropterin synthase EB778_RS05580 PF00667 FAD binding domain EB778_RS05580 PF00258 Flavodoxin EB778_RS05580 PF00175 Oxidoreductase NAD-binding domain EB778_RS05585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EB778_RS05585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EB778_RS05590 PF01507 Phosphoadenosine phosphosulfate reductase family EB778_RS05595 PF11047 Salmonella outer protein D EB778_RS05600 PF00270 DEAD/DEAH box helicase EB778_RS05600 PF18019 HD domain EB778_RS05600 PF00271 Helicase conserved C-terminal domain EB778_RS05605 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) EB778_RS05615 PF09344 CT1975-like protein EB778_RS05620 PF09704 CRISPR-associated protein (Cas_Cas5) EB778_RS05630 PF01867 CRISPR associated protein Cas1 EB778_RS05635 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) EB778_RS05640 PF04389 Peptidase family M28 EB778_RS05645 PF01507 Phosphoadenosine phosphosulfate reductase family EB778_RS05650 PF00009 Elongation factor Tu GTP binding domain EB778_RS05660 PF12084 Protein of unknown function (DUF3561) EB778_RS05665 PF04977 Septum formation initiator EB778_RS05670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EB778_RS05675 PF02542 YgbB family EB778_RS05680 PF01142 tRNA pseudouridine synthase D (TruD) EB778_RS05685 PF01975 Survival protein SurE EB778_RS05695 PF01476 LysM domain EB778_RS05695 PF01551 Peptidase family M23 EB778_RS05700 PF04542 Sigma-70 region 2 EB778_RS05700 PF04545 Sigma-70, region 4 EB778_RS05700 PF00140 Sigma-70 factor, region 1.2 EB778_RS05700 PF04539 Sigma-70 region 3 EB778_RS05710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EB778_RS05715 PF02441 Flavoprotein EB778_RS05720 PF01047 MarR family EB778_RS05725 PF08220 DeoR-like helix-turn-helix domain EB778_RS05725 PF00455 DeoR C terminal sensor domain EB778_RS05730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EB778_RS05730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EB778_RS05735 PF07005 Sugar-binding N-terminal domain EB778_RS05735 PF17042 Nucleotide-binding C-terminal domain EB778_RS05740 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS05745 PF01261 Xylose isomerase-like TIM barrel EB778_RS05750 PF01370 NAD dependent epimerase/dehydratase family EB778_RS05755 PF02447 GntP family permease EB778_RS05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS05760 PF03466 LysR substrate binding domain EB778_RS05765 PF07690 Major Facilitator Superfamily EB778_RS05775 PF00488 MutS domain V EB778_RS05775 PF01624 MutS domain I EB778_RS05775 PF05192 MutS domain III EB778_RS05775 PF05190 MutS family domain IV EB778_RS05775 PF05188 MutS domain II EB778_RS05785 PF00149 Calcineurin-like phosphoesterase EB778_RS05810 PF04741 InvH outer membrane lipoprotein EB778_RS05815 PF12833 Helix-turn-helix domain EB778_RS05820 PF03958 Bacterial type II/III secretion system short domain EB778_RS05820 PF00263 Bacterial type II and III secretion system protein EB778_RS05825 PF07201 HrpJ-like domain EB778_RS05830 PF00771 FHIPEP family EB778_RS05835 PF03519 Invasion protein B family EB778_RS05840 PF18269 T3SS EscN ATPase C-terminal domain EB778_RS05840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS05840 PF02874 ATP synthase alpha/beta family, beta-barrel domain EB778_RS05845 PF02090 Salmonella surface presentation of antigen gene type M protein EB778_RS05850 PF02510 Surface presentation of antigens protein EB778_RS05855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EB778_RS05860 PF00813 FliP family EB778_RS05865 PF01313 Bacterial export proteins, family 3 EB778_RS05870 PF01311 Bacterial export proteins, family 1 EB778_RS05875 PF01312 FlhB HrpN YscU SpaS Family EB778_RS05880 PF07720 Tetratricopeptide repeat EB778_RS05885 PF04888 Secretion system effector C (SseC) like family EB778_RS05885 PF16535 Type III cell invasion protein SipB EB778_RS05890 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) EB778_RS05895 PF06511 Type III secretion systems tip complex components EB778_RS05905 PF00550 Phosphopantetheine attachment site EB778_RS05915 PF05932 Tir chaperone protein (CesT) family EB778_RS05920 PF03545 Yersinia virulence determinant (YopE) EB778_RS05920 PF00102 Protein-tyrosine phosphatase EB778_RS05920 PF09119 SicP binding EB778_RS05925 PF01464 Transglycosylase SLT domain EB778_RS05930 PF00486 Transcriptional regulatory protein, C terminal EB778_RS05935 PF12833 Helix-turn-helix domain EB778_RS05940 PF09480 Type III secretion system protein PrgH-EprH (PrgH) EB778_RS05945 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF EB778_RS05955 PF01514 Secretory protein of YscJ/FliF family EB778_RS05960 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) EB778_RS05985 PF03421 YopJ Serine/Threonine acetyltransferase EB778_RS05990 PF00950 ABC 3 transport family EB778_RS05995 PF00950 ABC 3 transport family EB778_RS06000 PF00005 ABC transporter EB778_RS06005 PF01297 Zinc-uptake complex component A periplasmic EB778_RS06010 PF11756 Nitrous oxide-stimulated promoter EB778_RS06015 PF00158 Sigma-54 interaction domain EB778_RS06015 PF01590 GAF domain EB778_RS06015 PF02954 Bacterial regulatory protein, Fis family EB778_RS06020 PF02769 AIR synthase related protein, C-terminal domain EB778_RS06020 PF00586 AIR synthase related protein, N-terminal domain EB778_RS06025 PF01924 Hydrogenase formation hypA family EB778_RS06030 PF01455 HupF/HypC family EB778_RS06035 PF02492 CobW/HypB/UreG, nucleotide-binding domain EB778_RS06040 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EB778_RS06045 PF11046 Transcriptional repressor of hyc and hyp operons EB778_RS06050 PF13247 4Fe-4S dicluster domain EB778_RS06055 PF00361 Proton-conducting membrane transporter EB778_RS06060 PF00146 NADH dehydrogenase EB778_RS06065 PF00374 Nickel-dependent hydrogenase EB778_RS06065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EB778_RS06065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EB778_RS06070 PF12838 4Fe-4S dicluster domain EB778_RS06075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EB778_RS06080 PF07450 Formate hydrogenlyase maturation protein HycH EB778_RS06085 PF01750 Hydrogenase maturation protease EB778_RS06095 PF12800 4Fe-4S binding domain EB778_RS06095 PF13247 4Fe-4S dicluster domain EB778_RS06100 PF17788 HypF Kae1-like domain EB778_RS06100 PF00708 Acylphosphatase EB778_RS06100 PF01300 Telomere recombination EB778_RS06100 PF07503 HypF finger EB778_RS06105 PF18113 Rubredoxin binding C-terminal domain EB778_RS06105 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS06110 PF00258 Flavodoxin EB778_RS06110 PF00753 Metallo-beta-lactamase superfamily EB778_RS06110 PF00301 Rubredoxin EB778_RS06115 PF00158 Sigma-54 interaction domain EB778_RS06115 PF01590 GAF domain EB778_RS06120 PF01380 SIS domain EB778_RS06120 PF00571 CBS domain EB778_RS06125 PF00455 DeoR C terminal sensor domain EB778_RS06125 PF08220 DeoR-like helix-turn-helix domain EB778_RS06130 PF06923 Glucitol operon activator protein (GutM) EB778_RS06135 PF00106 short chain dehydrogenase EB778_RS06140 PF03829 PTS system glucitol/sorbitol-specific IIA component EB778_RS06145 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EB778_RS06145 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EB778_RS06150 PF03608 PTS system enzyme II sorbitol-specific factor EB778_RS06155 PF13406 Transglycosylase SLT domain EB778_RS06165 PF02464 Competence-damaged protein EB778_RS06170 PF00154 recA bacterial DNA recombination protein EB778_RS06175 PF02631 RecX family EB778_RS06185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EB778_RS06185 PF01411 tRNA synthetases class II (A) EB778_RS06185 PF02272 DHHA1 domain EB778_RS06190 PF02599 Global regulator protein family EB778_RS06220 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS06225 PF09335 SNARE associated Golgi protein EB778_RS06230 PF04262 Glutamate-cysteine ligase EB778_RS06235 PF02664 S-Ribosylhomocysteinase (LuxS) EB778_RS06245 PF07690 Major Facilitator Superfamily EB778_RS06250 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS06250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS06255 PF01047 MarR family EB778_RS06260 PF07690 Major Facilitator Superfamily EB778_RS06265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EB778_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS06275 PF00571 CBS domain EB778_RS06275 PF00005 ABC transporter EB778_RS06280 PF00268 Ribonucleotide reductase, small chain EB778_RS06285 PF00317 Ribonucleotide reductase, all-alpha domain EB778_RS06285 PF08343 Ribonucleotide reductase N-terminal EB778_RS06285 PF02867 Ribonucleotide reductase, barrel domain EB778_RS06290 PF07972 NrdI Flavodoxin like EB778_RS06295 PF00462 Glutaredoxin EB778_RS06305 PF02627 Carboxymuconolactone decarboxylase family EB778_RS06310 PF00392 Bacterial regulatory proteins, gntR family EB778_RS06310 PF00155 Aminotransferase class I and II EB778_RS06315 PF05957 Bacterial protein of unknown function (DUF883) EB778_RS06320 PF09400 Protein of unknown function (DUF2002) EB778_RS06325 PF06610 L-alanine exporter EB778_RS06335 PF00816 H-NS histone family EB778_RS06345 PF00581 Rhodanese-like domain EB778_RS06345 PF11127 Protein of unknown function (DUF2892) EB778_RS06350 PF01022 Bacterial regulatory protein, arsR family EB778_RS06355 PF01679 Proteolipid membrane potential modulator EB778_RS06365 PF01476 LysM domain EB778_RS06365 PF04972 BON domain EB778_RS06370 PF07729 FCD domain EB778_RS06370 PF00392 Bacterial regulatory proteins, gntR family EB778_RS06375 PF00324 Amino acid permease EB778_RS06380 PF00202 Aminotransferase class-III EB778_RS06385 PF00171 Aldehyde dehydrogenase family EB778_RS06390 PF01266 FAD dependent oxidoreductase EB778_RS06395 PF08943 CsiD EB778_RS06400 PF01970 Tripartite tricarboxylate transporter TctA family EB778_RS06415 PF00486 Transcriptional regulatory protein, C terminal EB778_RS06415 PF00072 Response regulator receiver domain EB778_RS06420 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS06425 PF03824 High-affinity nickel-transport protein EB778_RS06440 PF04393 Protein of unknown function (DUF535) EB778_RS06445 PF00805 Pentapeptide repeats (8 copies) EB778_RS06460 PF07715 TonB-dependent Receptor Plug Domain EB778_RS06460 PF00593 TonB dependent receptor EB778_RS06475 PF00664 ABC transporter transmembrane region EB778_RS06475 PF00005 ABC transporter EB778_RS06480 PF06722 Protein of unknown function (DUF1205) EB778_RS06515 PF00589 Phage integrase family EB778_RS06515 PF13356 Arm DNA-binding domain EB778_RS06525 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS06525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS06530 PF00005 ABC transporter EB778_RS06530 PF00664 ABC transporter transmembrane region EB778_RS06545 PF01668 SmpB protein EB778_RS06550 PF03364 Polyketide cyclase / dehydrase and lipid transport EB778_RS06555 PF03658 RnfH family Ubiquitin EB778_RS06560 PF04355 SmpA / OmlA family EB778_RS06565 PF02463 RecF/RecN/SMC N terminal domain EB778_RS06570 PF01513 ATP-NAD kinase EB778_RS06575 PF01025 GrpE EB778_RS06595 PF03471 Transporter associated domain EB778_RS06595 PF01595 Cyclin M transmembrane N-terminal domain EB778_RS06595 PF00571 CBS domain EB778_RS06600 PF01578 Cytochrome C assembly protein EB778_RS06605 PF02978 Signal peptide binding domain EB778_RS06605 PF02881 SRP54-type protein, helical bundle domain EB778_RS06605 PF00448 SRP54-type protein, GTPase domain EB778_RS06610 PF00886 Ribosomal protein S16 EB778_RS06615 PF05239 PRC-barrel domain EB778_RS06615 PF01782 RimM N-terminal domain EB778_RS06620 PF01746 tRNA (Guanine-1)-methyltransferase EB778_RS06625 PF01245 Ribosomal protein L19 EB778_RS06630 PF17152 Periplasmic sensor domain EB778_RS06630 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS06635 PF13689 YfiR/HmsC-like EB778_RS06640 PF00793 DAHP synthetase I family EB778_RS06645 PF01817 Chorismate mutase type II EB778_RS06645 PF02153 Prephenate dehydrogenase EB778_RS06650 PF08450 SMP-30/Gluconolactonase/LRE-like region EB778_RS06655 PF01817 Chorismate mutase type II EB778_RS06655 PF00800 Prephenate dehydratase EB778_RS06665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EB778_RS06675 PF13525 Outer membrane lipoprotein EB778_RS06680 PF00849 RNA pseudouridylate synthase EB778_RS06680 PF01479 S4 domain EB778_RS06685 PF02578 Multi-copper polyphenol oxidoreductase laccase EB778_RS06690 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS06690 PF02861 Clp amino terminal domain, pathogenicity island component EB778_RS06690 PF17871 AAA lid domain EB778_RS06690 PF07724 AAA domain (Cdc48 subfamily) EB778_RS06690 PF10431 C-terminal, D2-small domain, of ClpB protein EB778_RS06720 PF00083 Sugar (and other) transporter EB778_RS06725 PF10043 Predicted periplasmic lipoprotein (DUF2279) EB778_RS06730 PF13091 PLD-like domain EB778_RS06735 PF13607 Succinyl-CoA ligase like flavodoxin domain EB778_RS06735 PF00583 Acetyltransferase (GNAT) family EB778_RS06735 PF13380 CoA binding domain EB778_RS06740 PF03942 DTW domain EB778_RS06745 PF00085 Thioredoxin EB778_RS06750 PF08032 RNA 2'-O ribose methyltransferase substrate binding EB778_RS06750 PF00588 SpoU rRNA Methylase family EB778_RS06755 PF03167 Uracil DNA glycosylase superfamily EB778_RS06760 PF01228 Glycine radical EB778_RS06765 PF01810 LysE type translocator EB778_RS06770 PF03466 LysR substrate binding domain EB778_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS06775 PF00270 DEAD/DEAH box helicase EB778_RS06775 PF00271 Helicase conserved C-terminal domain EB778_RS06780 PF05175 Methyltransferase small domain EB778_RS06785 PF00890 FAD binding domain EB778_RS06785 PF02910 Fumarate reductase flavoprotein C-term EB778_RS06800 PF04542 Sigma-70 region 2 EB778_RS06800 PF08281 Sigma-70, region 4 EB778_RS06805 PF03872 Anti sigma-E protein RseA, N-terminal domain EB778_RS06805 PF03873 Anti sigma-E protein RseA, C-terminal domain EB778_RS06810 PF17188 MucB/RseB C-terminal domain EB778_RS06810 PF03888 MucB/RseB N-terminal domain EB778_RS06820 PF03144 Elongation factor Tu domain 2 EB778_RS06820 PF00009 Elongation factor Tu GTP binding domain EB778_RS06820 PF06421 GTP-binding protein LepA C-terminus EB778_RS06820 PF00679 Elongation factor G C-terminus EB778_RS06825 PF10502 Signal peptidase, peptidase S26 EB778_RS06830 PF00035 Double-stranded RNA binding motif EB778_RS06830 PF14622 Ribonuclease-III-like EB778_RS06835 PF01926 50S ribosome-binding GTPase EB778_RS06835 PF07650 KH domain EB778_RS06840 PF11967 Recombination protein O N terminal EB778_RS06840 PF02565 Recombination protein O C terminal EB778_RS06845 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EB778_RS06850 PF01648 4'-phosphopantetheinyl transferase superfamily EB778_RS06855 PF12838 4Fe-4S dicluster domain EB778_RS06860 PF03466 LysR substrate binding domain EB778_RS06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS06865 PF07690 Major Facilitator Superfamily EB778_RS06870 PF08546 Ketopantoate reductase PanE/ApbA C terminal EB778_RS06870 PF02558 Ketopantoate reductase PanE/ApbA EB778_RS06875 PF01380 SIS domain EB778_RS06875 PF01418 Helix-turn-helix domain, rpiR family EB778_RS06880 PF01380 SIS domain EB778_RS06885 PF02378 Phosphotransferase system, EIIC EB778_RS06885 PF00367 phosphotransferase system, EIIB EB778_RS06895 PF14437 MafB19-like deaminase EB778_RS06900 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS06900 PF01464 Transglycosylase SLT domain EB778_RS06910 PF02769 AIR synthase related protein, C-terminal domain EB778_RS06910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EB778_RS06910 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EB778_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS06915 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS06920 PF13942 YfhG lipoprotein EB778_RS06925 PF00072 Response regulator receiver domain EB778_RS06925 PF00158 Sigma-54 interaction domain EB778_RS06930 PF00543 Nitrogen regulatory protein P-II EB778_RS06935 PF00854 POT family EB778_RS06940 PF01276 Orn/Lys/Arg decarboxylase, major domain EB778_RS06940 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EB778_RS06940 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EB778_RS06945 PF13520 Amino acid permease EB778_RS06950 PF00486 Transcriptional regulatory protein, C terminal EB778_RS06950 PF18500 CadC C-terminal domain 1 EB778_RS06955 PF00175 Oxidoreductase NAD-binding domain EB778_RS06955 PF00042 Globin EB778_RS06955 PF00970 Oxidoreductase FAD-binding domain EB778_RS06960 PF00464 Serine hydroxymethyltransferase EB778_RS06965 PF12832 MFS_1 like family EB778_RS06970 PF00874 PRD domain EB778_RS06980 PF03824 High-affinity nickel-transport protein EB778_RS06985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EB778_RS06985 PF13187 4Fe-4S dicluster domain EB778_RS06985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EB778_RS06990 PF00175 Oxidoreductase NAD-binding domain EB778_RS06990 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EB778_RS06995 PF17179 4Fe-4S dicluster domain EB778_RS07000 PF12146 Serine aminopeptidase, S33 EB778_RS07005 PF00459 Inositol monophosphatase family EB778_RS07010 PF00588 SpoU rRNA Methylase family EB778_RS07015 PF02082 Transcriptional regulator EB778_RS07020 PF00266 Aminotransferase class-V EB778_RS07025 PF01592 NifU-like N terminal domain EB778_RS07030 PF01521 Iron-sulphur cluster biosynthesis EB778_RS07035 PF07743 HSCB C-terminal oligomerisation domain EB778_RS07040 PF00012 Hsp70 protein EB778_RS07045 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS07050 PF04384 Iron-sulphur cluster assembly EB778_RS07055 PF12404 Peptidase EB778_RS07055 PF00883 Cytosol aminopeptidase family, catalytic domain EB778_RS07060 PF07179 SseB protein N-terminal domain EB778_RS07060 PF14581 SseB protein C-terminal domain EB778_RS07070 PF00581 Rhodanese-like domain EB778_RS07075 PF07678 A-macroglobulin TED domain EB778_RS07075 PF01835 MG2 domain EB778_RS07075 PF17962 Bacterial macroglobulin domain 6 EB778_RS07075 PF00207 Alpha-2-macroglobulin family EB778_RS07075 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain EB778_RS07075 PF11974 Bacterial alpha-2-macroglobulin MG3 domain EB778_RS07075 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EB778_RS07075 PF07703 Alpha-2-macroglobulin bait region domain EB778_RS07075 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain EB778_RS07080 PF00905 Penicillin binding protein transpeptidase domain EB778_RS07080 PF00912 Transglycosylase EB778_RS07080 PF06832 Penicillin-Binding Protein C-terminus Family EB778_RS07085 PF01568 Molydopterin dinucleotide binding domain EB778_RS07085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS07085 PF00384 Molybdopterin oxidoreductase EB778_RS07090 PF13247 4Fe-4S dicluster domain EB778_RS07090 PF12800 4Fe-4S binding domain EB778_RS07105 PF00334 Nucleoside diphosphate kinase EB778_RS07110 PF04055 Radical SAM superfamily EB778_RS07115 PF13464 Domain of unknown function (DUF4115) EB778_RS07120 PF04551 GcpE protein EB778_RS07125 PF03129 Anticodon binding domain EB778_RS07125 PF13393 Histidyl-tRNA synthetase EB778_RS07130 PF09976 Tetratricopeptide repeat-like domain EB778_RS07135 PF13360 PQQ-like domain EB778_RS07140 PF01926 50S ribosome-binding GTPase EB778_RS07140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EB778_RS07145 PF07191 zinc-ribbons EB778_RS07150 PF01476 LysM domain EB778_RS07150 PF07979 Intimin C-type lectin domain EB778_RS07150 PF11924 Inverse autotransporter, beta-domain EB778_RS07150 PF02368 Bacterial Ig-like domain (group 2) EB778_RS07150 PF02369 Bacterial Ig-like domain (group 1) EB778_RS07170 PF03797 Autotransporter beta-domain EB778_RS07175 PF13742 OB-fold nucleic acid binding domain EB778_RS07175 PF02601 Exonuclease VII, large subunit EB778_RS07180 PF00478 IMP dehydrogenase / GMP reductase domain EB778_RS07180 PF00571 CBS domain EB778_RS07185 PF02540 NAD synthase EB778_RS07185 PF00117 Glutamine amidotransferase class-I EB778_RS07185 PF00958 GMP synthase C terminal domain EB778_RS07210 PF11119 Protein of unknown function (DUF2633) EB778_RS07220 PF00563 EAL domain EB778_RS07220 PF05231 MASE1 EB778_RS07225 PF02541 Ppx/GppA phosphatase family EB778_RS07230 PF02503 Polyphosphate kinase middle domain EB778_RS07230 PF13089 Polyphosphate kinase N-terminal domain EB778_RS07230 PF17941 Polyphosphate kinase C-terminal domain 1 EB778_RS07230 PF13090 Polyphosphate kinase C-terminal domain 2 EB778_RS07235 PF00551 Formyl transferase EB778_RS07240 PF02769 AIR synthase related protein, C-terminal domain EB778_RS07240 PF00586 AIR synthase related protein, N-terminal domain EB778_RS07250 PF00860 Permease family EB778_RS07255 PF00308 Bacterial dnaA protein EB778_RS07260 PF03960 ArsC family EB778_RS07265 PF01435 Peptidase family M48 EB778_RS07270 PF01594 AI-2E family transporter EB778_RS07275 PF05651 Putative sugar diacid recognition EB778_RS07275 PF17853 GGDEF-like domain EB778_RS07275 PF13556 PucR C-terminal helix-turn-helix domain EB778_RS07280 PF02447 GntP family permease EB778_RS07285 PF02595 Glycerate kinase family EB778_RS07290 PF00578 AhpC/TSA family EB778_RS07295 PF01842 ACT domain EB778_RS07300 PF00701 Dihydrodipicolinate synthetase family EB778_RS07305 PF06804 NlpB/DapX lipoprotein EB778_RS07310 PF01259 SAICAR synthetase EB778_RS07315 PF04228 Putative neutral zinc metallopeptidase EB778_RS07320 PF05127 Helicase EB778_RS07320 PF13718 GNAT acetyltransferase 2 EB778_RS07320 PF17176 tRNA-binding domain EB778_RS07320 PF08351 Domain of unknown function (DUF1726) EB778_RS07325 PF13980 Uncharacterised protein family (UPF0370) EB778_RS07330 PF01546 Peptidase family M20/M25/M40 EB778_RS07330 PF07687 Peptidase dimerisation domain EB778_RS07335 PF03960 ArsC family EB778_RS07345 PF00873 AcrB/AcrD/AcrF family EB778_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS07350 PF00672 HAMP domain EB778_RS07350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EB778_RS07350 PF07730 Histidine kinase EB778_RS07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS07355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EB778_RS07355 PF13247 4Fe-4S dicluster domain EB778_RS07360 PF00144 Beta-lactamase EB778_RS07365 PF00293 NUDIX domain EB778_RS07370 PF06674 Protein of unknown function (DUF1176) EB778_RS07380 PF02780 Transketolase, C-terminal domain EB778_RS07380 PF00456 Transketolase, thiamine diphosphate binding domain EB778_RS07380 PF02779 Transketolase, pyrimidine binding domain EB778_RS07385 PF00923 Transaldolase/Fructose-6-phosphate aldolase EB778_RS07390 PF00390 Malic enzyme, N-terminal domain EB778_RS07390 PF01515 Phosphate acetyl/butaryl transferase EB778_RS07390 PF03949 Malic enzyme, NAD binding domain EB778_RS07395 PF00936 BMC domain EB778_RS07400 PF10662 Ethanolamine utilisation - propanediol utilisation EB778_RS07405 PF06249 Ethanolamine utilisation protein EutQ EB778_RS07410 PF01923 Cobalamin adenosyltransferase EB778_RS07415 PF01515 Phosphate acetyl/butaryl transferase EB778_RS07420 PF00936 BMC domain EB778_RS07425 PF03319 Ethanolamine utilisation protein EutN/carboxysome EB778_RS07430 PF00171 Aldehyde dehydrogenase family EB778_RS07440 PF00465 Iron-containing alcohol dehydrogenase EB778_RS07445 PF04346 Ethanolamine utilisation protein, EutH EB778_RS07450 PF06277 Ethanolamine utilisation protein EutA EB778_RS07455 PF06751 Ethanolamine ammonia lyase large subunit (EutB) EB778_RS07460 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EB778_RS07465 PF00936 BMC domain EB778_RS07470 PF16365 Ethanolamine utilization protein EutK C-terminus EB778_RS07470 PF00936 BMC domain EB778_RS07475 PF12833 Helix-turn-helix domain EB778_RS07480 PF09234 Domain of unknown function (DUF1963) EB778_RS07490 PF01218 Coproporphyrinogen III oxidase EB778_RS07495 PF01520 N-acetylmuramoyl-L-alanine amidase EB778_RS07500 PF00583 Acetyltransferase (GNAT) family EB778_RS07505 PF11143 Protein of unknown function (DUF2919) EB778_RS07510 PF06572 Protein of unknown function (DUF1131) EB778_RS07515 PF04261 Dyp-type peroxidase family EB778_RS07530 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS07535 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS07540 PF00005 ABC transporter EB778_RS07545 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS07550 PF00912 Transglycosylase EB778_RS07555 PF17263 Family of unknown function (DUF5329) EB778_RS07560 PF00117 Glutamine amidotransferase class-I EB778_RS07565 PF00155 Aminotransferase class I and II EB778_RS07565 PF00392 Bacterial regulatory proteins, gntR family EB778_RS07570 PF08543 Phosphomethylpyrimidine kinase EB778_RS07580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EB778_RS07585 PF05524 PEP-utilising enzyme, N-terminal EB778_RS07585 PF00391 PEP-utilising enzyme, mobile domain EB778_RS07585 PF02896 PEP-utilising enzyme, TIM barrel domain EB778_RS07590 PF00381 PTS HPr component phosphorylation site EB778_RS07595 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS07605 PF04354 ZipA, C-terminal FtsZ-binding domain EB778_RS07610 PF00533 BRCA1 C Terminus (BRCT) domain EB778_RS07610 PF01653 NAD-dependent DNA ligase adenylation domain EB778_RS07610 PF03120 NAD-dependent DNA ligase OB-fold domain EB778_RS07610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EB778_RS07610 PF12826 Helix-hairpin-helix motif EB778_RS07615 PF12843 Putative quorum-sensing-regulated virulence factor EB778_RS07620 PF13593 SBF-like CPA transporter family (DUF4137) EB778_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS07625 PF03466 LysR substrate binding domain EB778_RS07630 PF03502 Nucleoside-specific channel-forming protein, Tsx EB778_RS07635 PF01048 Phosphorylase superfamily EB778_RS07640 PF03825 Nucleoside H+ symporter EB778_RS07650 PF03466 LysR substrate binding domain EB778_RS07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS07675 PF00749 tRNA synthetases class I (E and Q), catalytic domain EB778_RS07680 PF07037 Putative transcription regulator (DUF1323) EB778_RS07685 PF07037 Putative transcription regulator (DUF1323) EB778_RS07700 PF05231 MASE1 EB778_RS07700 PF00563 EAL domain EB778_RS07705 PF01773 Na+ dependent nucleoside transporter N-terminus EB778_RS07705 PF07662 Na+ dependent nucleoside transporter C-terminus EB778_RS07705 PF07670 Nucleoside recognition EB778_RS07710 PF01566 Natural resistance-associated macrophage protein EB778_RS07715 PF10697 Protein of unknown function (DUF2502) EB778_RS07720 PF00248 Aldo/keto reductase family EB778_RS07725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS07725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS07725 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS07730 PF00654 Voltage gated chloride channel EB778_RS07735 PF02685 Glucokinase EB778_RS07740 PF00155 Aminotransferase class I and II EB778_RS07750 PF03279 Bacterial lipid A biosynthesis acyltransferase EB778_RS07755 PF10810 Protein of unknown function (DUF2545) EB778_RS07760 PF07690 Major Facilitator Superfamily EB778_RS07770 PF00672 HAMP domain EB778_RS07770 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS07775 PF14532 Sigma-54 interaction domain EB778_RS07775 PF00072 Response regulator receiver domain EB778_RS07775 PF02954 Bacterial regulatory protein, Fis family EB778_RS07780 PF01278 Omptin family EB778_RS07790 PF01226 Formate/nitrite transporter EB778_RS07795 PF04333 MlaA lipoprotein EB778_RS07805 PF01797 Transposase IS200 like EB778_RS07810 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EB778_RS07815 PF04175 Protein of unknown function (DUF406) EB778_RS07825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EB778_RS07825 PF00378 Enoyl-CoA hydratase/isomerase EB778_RS07825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EB778_RS07830 PF00300 Histidine phosphatase superfamily (branch 1) EB778_RS07835 PF01713 Smr domain EB778_RS07840 PF05175 Methyltransferase small domain EB778_RS07845 PF01264 Chorismate synthase EB778_RS07850 PF03411 Penicillin-insensitive murein endopeptidase EB778_RS07855 PF01925 Sulfite exporter TauE/SafE EB778_RS07860 PF04315 Elongation factor P hydroxylase EB778_RS07865 PF08891 YfcL protein EB778_RS07870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EB778_RS07870 PF01266 FAD dependent oxidoreductase EB778_RS07875 PF02801 Beta-ketoacyl synthase, C-terminal domain EB778_RS07875 PF00109 Beta-ketoacyl synthase, N-terminal domain EB778_RS07880 PF02517 CPBP intramembrane metalloprotease EB778_RS07900 PF07690 Major Facilitator Superfamily EB778_RS07910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EB778_RS07910 PF11890 Domain of unknown function (DUF3410) EB778_RS07910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EB778_RS07915 PF02774 Semialdehyde dehydrogenase, dimerisation domain EB778_RS07915 PF01118 Semialdehyde dehydrogenase, NAD binding domain EB778_RS07920 PF01416 tRNA pseudouridine synthase EB778_RS07925 PF09335 SNARE associated Golgi protein EB778_RS07930 PF17848 Acetyl-coA carboxylase zinc finger domain EB778_RS07930 PF01039 Carboxyl transferase domain EB778_RS07935 PF02875 Mur ligase family, glutamate ligase domain EB778_RS07935 PF08245 Mur ligase middle domain EB778_RS07940 PF05036 Sporulation related domain EB778_RS07945 PF02674 Colicin V production protein EB778_RS07950 PF00156 Phosphoribosyl transferase domain EB778_RS07955 PF00158 Sigma-54 interaction domain EB778_RS07955 PF13426 PAS domain EB778_RS07955 PF02954 Bacterial regulatory protein, Fis family EB778_RS07960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EB778_RS07960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EB778_RS07965 PF13520 Amino acid permease EB778_RS07970 PF01168 Alanine racemase, N-terminal domain EB778_RS07980 PF02441 Flavoprotein EB778_RS07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08005 PF00005 ABC transporter EB778_RS08010 PF01370 NAD dependent epimerase/dehydratase family EB778_RS08010 PF08338 Domain of unknown function (DUF1731) EB778_RS08015 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS08015 PF00043 Glutathione S-transferase, C-terminal domain EB778_RS08020 PF14834 Glutathione S-transferase, C-terminal domain EB778_RS08020 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS08025 PF12850 Calcineurin-like phosphoesterase superfamily domain EB778_RS08030 PF00293 NUDIX domain EB778_RS08035 PF00356 Bacterial regulatory proteins, lacI family EB778_RS08040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS08050 PF03611 PTS system sugar-specific permease component EB778_RS08055 PF00456 Transketolase, thiamine diphosphate binding domain EB778_RS08060 PF02779 Transketolase, pyrimidine binding domain EB778_RS08060 PF02780 Transketolase, C-terminal domain EB778_RS08060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EB778_RS08065 PF03606 C4-dicarboxylate anaerobic carrier EB778_RS08070 PF01515 Phosphate acetyl/butaryl transferase EB778_RS08070 PF07085 DRTGG domain EB778_RS08075 PF00871 Acetokinase family EB778_RS08080 PF04217 Protein of unknown function, DUF412 EB778_RS08085 PF03887 YfbU domain EB778_RS08090 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS08095 PF02080 TrkA-C domain EB778_RS08095 PF03600 Citrate transporter EB778_RS08110 PF00155 Aminotransferase class I and II EB778_RS08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS08115 PF03466 LysR substrate binding domain EB778_RS08125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EB778_RS08130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EB778_RS08135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EB778_RS08135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EB778_RS08145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EB778_RS08145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EB778_RS08145 PF10531 SLBB domain EB778_RS08150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS08150 PF01568 Molydopterin dinucleotide binding domain EB778_RS08150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EB778_RS08150 PF00384 Molybdopterin oxidoreductase EB778_RS08155 PF00146 NADH dehydrogenase EB778_RS08160 PF12838 4Fe-4S dicluster domain EB778_RS08165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EB778_RS08170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EB778_RS08175 PF00361 Proton-conducting membrane transporter EB778_RS08175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EB778_RS08180 PF00361 Proton-conducting membrane transporter EB778_RS08185 PF00361 Proton-conducting membrane transporter EB778_RS08190 PF03797 Autotransporter beta-domain EB778_RS08195 PF12450 von Willebrand factor EB778_RS08195 PF00092 von Willebrand factor type A domain EB778_RS08195 PF12034 Domain of unknown function (DUF3520) EB778_RS08200 PF01584 CheW-like domain EB778_RS08200 PF00072 Response regulator receiver domain EB778_RS08205 PF12706 Beta-lactamase superfamily domain EB778_RS08210 PF13673 Acetyltransferase (GNAT) domain EB778_RS08215 PF05957 Bacterial protein of unknown function (DUF883) EB778_RS08220 PF00425 chorismate binding enzyme EB778_RS08225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS08225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS08225 PF16582 Middle domain of thiamine pyrophosphate EB778_RS08230 PF12697 Alpha/beta hydrolase family EB778_RS08235 PF00378 Enoyl-CoA hydratase/isomerase EB778_RS08240 PF13378 Enolase C-terminal domain-like EB778_RS08245 PF13193 AMP-binding enzyme C-terminal domain EB778_RS08245 PF00501 AMP-binding enzyme EB778_RS08260 PF00892 EamA-like transporter family EB778_RS08265 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EB778_RS08270 PF01522 Polysaccharide deacetylase EB778_RS08275 PF00551 Formyl transferase EB778_RS08275 PF01370 NAD dependent epimerase/dehydratase family EB778_RS08275 PF02911 Formyl transferase, C-terminal domain EB778_RS08280 PF00535 Glycosyl transferase family 2 EB778_RS08285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EB778_RS08290 PF00300 Histidine phosphatase superfamily (branch 1) EB778_RS08295 PF00293 NUDIX domain EB778_RS08300 PF07437 YfaZ precursor EB778_RS08305 PF00994 Probable molybdopterin binding domain EB778_RS08310 PF01614 Bacterial transcriptional regulator EB778_RS08310 PF09339 IclR helix-turn-helix domain EB778_RS08315 PF13378 Enolase C-terminal domain-like EB778_RS08315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS08320 PF07690 Major Facilitator Superfamily EB778_RS08325 PF03328 HpcH/HpaI aldolase/citrate lyase family EB778_RS08330 PF00994 Probable molybdopterin binding domain EB778_RS08340 PF13183 4Fe-4S dicluster domain EB778_RS08340 PF02754 Cysteine-rich domain EB778_RS08345 PF00890 FAD binding domain EB778_RS08350 PF04324 BFD-like [2Fe-2S] binding domain EB778_RS08350 PF01266 FAD dependent oxidoreductase EB778_RS08355 PF07690 Major Facilitator Superfamily EB778_RS08360 PF03009 Glycerophosphoryl diester phosphodiesterase family EB778_RS08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS08365 PF03466 LysR substrate binding domain EB778_RS08370 PF07690 Major Facilitator Superfamily EB778_RS08375 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS08380 PF00268 Ribonucleotide reductase, small chain EB778_RS08385 PF03477 ATP cone domain EB778_RS08385 PF02867 Ribonucleotide reductase, barrel domain EB778_RS08385 PF00317 Ribonucleotide reductase, all-alpha domain EB778_RS08400 PF07690 Major Facilitator Superfamily EB778_RS08405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS08405 PF13378 Enolase C-terminal domain-like EB778_RS08410 PF00521 DNA gyrase/topoisomerase IV, subunit A EB778_RS08410 PF03989 DNA gyrase C-terminal domain, beta-propeller EB778_RS08415 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS08415 PF09456 RcsC Alpha-Beta-Loop (ABL) EB778_RS08415 PF00072 Response regulator receiver domain EB778_RS08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS08420 PF00072 Response regulator receiver domain EB778_RS08420 PF00196 Bacterial regulatory proteins, luxR family EB778_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS08425 PF16359 RcsD-ABL domain EB778_RS08425 PF01627 Hpt domain EB778_RS08430 PF00267 Gram-negative porin EB778_RS08435 PF02424 ApbE family EB778_RS08440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EB778_RS08440 PF02805 Metal binding domain of Ada EB778_RS08440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EB778_RS08440 PF12833 Helix-turn-helix domain EB778_RS08445 PF13532 2OG-Fe(II) oxygenase superfamily EB778_RS08450 PF00005 ABC transporter EB778_RS08455 PF03974 Ecotin EB778_RS08460 PF13187 4Fe-4S dicluster domain EB778_RS08460 PF12800 4Fe-4S binding domain EB778_RS08460 PF00037 4Fe-4S binding domain EB778_RS08465 PF03927 NapD protein EB778_RS08470 PF01568 Molydopterin dinucleotide binding domain EB778_RS08470 PF00384 Molybdopterin oxidoreductase EB778_RS08470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS08475 PF12838 4Fe-4S dicluster domain EB778_RS08475 PF12800 4Fe-4S binding domain EB778_RS08480 PF13237 4Fe-4S dicluster domain EB778_RS08480 PF12801 4Fe-4S binding domain EB778_RS08485 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EB778_RS08490 PF03264 NapC/NirT cytochrome c family, N-terminal region EB778_RS08495 PF00005 ABC transporter EB778_RS08500 PF03379 CcmB protein EB778_RS08505 PF01578 Cytochrome C assembly protein EB778_RS08510 PF04995 Heme exporter protein D (CcmD) EB778_RS08515 PF03100 CcmE EB778_RS08520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EB778_RS08520 PF01578 Cytochrome C assembly protein EB778_RS08525 PF08534 Redoxin EB778_RS08530 PF03918 Cytochrome C biogenesis protein EB778_RS08535 PF00196 Bacterial regulatory proteins, luxR family EB778_RS08535 PF00072 Response regulator receiver domain EB778_RS08560 PF11893 Domain of unknown function (DUF3413) EB778_RS08560 PF00884 Sulfatase EB778_RS08565 PF07208 Protein of unknown function (DUF1414) EB778_RS08570 PF04245 37-kD nucleoid-associated bacterial protein EB778_RS08580 PF01386 Ribosomal L25p family EB778_RS08585 PF00271 Helicase conserved C-terminal domain EB778_RS08585 PF04851 Type III restriction enzyme, res subunit EB778_RS08590 PF01479 S4 domain EB778_RS08590 PF00849 RNA pseudouridylate synthase EB778_RS08595 PF07690 Major Facilitator Superfamily EB778_RS08600 PF13989 YejG-like protein EB778_RS08605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS08605 PF00005 ABC transporter EB778_RS08610 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS08625 PF12792 CSS motif domain associated with EAL EB778_RS08625 PF00563 EAL domain EB778_RS08630 PF00877 NlpC/P60 family EB778_RS08635 PF01569 PAP2 superfamily EB778_RS08640 PF02492 CobW/HypB/UreG, nucleotide-binding domain EB778_RS08640 PF07683 Cobalamin synthesis protein cobW C-terminal domain EB778_RS08645 PF01132 Elongation factor P (EF-P) OB domain EB778_RS08645 PF08207 Elongation factor P (EF-P) KOW-like domain EB778_RS08645 PF09285 Elongation factor P, C-terminal EB778_RS08650 PF03692 Putative zinc- or iron-chelating domain EB778_RS08665 PF07690 Major Facilitator Superfamily EB778_RS08670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS08670 PF00381 PTS HPr component phosphorylation site EB778_RS08675 PF00294 pfkB family carbohydrate kinase EB778_RS08680 PF02378 Phosphotransferase system, EIIC EB778_RS08680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS08685 PF01261 Xylose isomerase-like TIM barrel EB778_RS08690 PF03601 Conserved hypothetical protein 698 EB778_RS08695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS08695 PF03466 LysR substrate binding domain EB778_RS08700 PF00324 Amino acid permease EB778_RS08705 PF00593 TonB dependent receptor EB778_RS08705 PF07715 TonB-dependent Receptor Plug Domain EB778_RS08710 PF07690 Major Facilitator Superfamily EB778_RS08715 PF18429 Domain of unknown function (DUF5609) EB778_RS08720 PF03313 Serine dehydratase alpha chain EB778_RS08720 PF03315 Serine dehydratase beta chain EB778_RS08730 PF00756 Putative esterase EB778_RS08735 PF01227 GTP cyclohydrolase I EB778_RS08740 PF04235 Protein of unknown function (DUF418) EB778_RS08745 PF00356 Bacterial regulatory proteins, lacI family EB778_RS08750 PF13407 Periplasmic binding protein domain EB778_RS08755 PF00005 ABC transporter EB778_RS08760 PF02653 Branched-chain amino acid transport system / permease component EB778_RS08765 PF01180 Dihydroorotate dehydrogenase EB778_RS08770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS08770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EB778_RS08775 PF10808 Protein of unknown function (DUF2542) EB778_RS08780 PF02698 DUF218 domain EB778_RS08785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EB778_RS08785 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EB778_RS08790 PF04172 LrgB-like family EB778_RS08795 PF03788 LrgA family EB778_RS08800 PF03466 LysR substrate binding domain EB778_RS08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS08805 PF07690 Major Facilitator Superfamily EB778_RS08810 PF07883 Cupin domain EB778_RS08815 PF01557 Fumarylacetoacetate (FAA) hydrolase family EB778_RS08820 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS08820 PF14497 Glutathione S-transferase, C-terminal domain EB778_RS08825 PF01494 FAD binding domain EB778_RS08830 PF01207 Dihydrouridine synthase (Dus) EB778_RS08840 PF02321 Outer membrane efflux protein EB778_RS08850 PF09335 SNARE associated Golgi protein EB778_RS08855 PF04893 Yip1 domain EB778_RS08860 PF00768 D-alanyl-D-alanine carboxypeptidase EB778_RS08865 PF09330 D-lactate dehydrogenase, membrane binding EB778_RS08865 PF01565 FAD binding domain EB778_RS08870 PF00933 Glycosyl hydrolase family 3 N terminal domain EB778_RS08870 PF14310 Fibronectin type III-like domain EB778_RS08870 PF01915 Glycosyl hydrolase family 3 C-terminal domain EB778_RS08875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EB778_RS08880 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08885 PF00005 ABC transporter EB778_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS08900 PF13411 MerR HTH family regulatory protein EB778_RS08905 PF07694 5TMR of 5TMR-LYT EB778_RS08905 PF06580 Histidine kinase EB778_RS08910 PF04397 LytTr DNA-binding domain EB778_RS08910 PF00072 Response regulator receiver domain EB778_RS08915 PF07308 Protein of unknown function (DUF1456) EB778_RS08920 PF06998 Protein of unknown function (DUF1307) EB778_RS08925 PF06998 Protein of unknown function (DUF1307) EB778_RS08930 PF09334 tRNA synthetases class I (M) EB778_RS08930 PF01588 Putative tRNA binding domain EB778_RS08935 PF10609 NUBPL iron-transfer P-loop NTPase EB778_RS08950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS08950 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS08955 PF13954 PapC N-terminal domain EB778_RS08955 PF13953 PapC C-terminal domain EB778_RS08955 PF00577 Outer membrane usher protein EB778_RS08960 PF00419 Fimbrial protein EB778_RS08965 PF11776 Nickel/cobalt transporter regulator EB778_RS08970 PF02110 Hydroxyethylthiazole kinase family EB778_RS08975 PF08543 Phosphomethylpyrimidine kinase EB778_RS08980 PF07702 UTRA domain EB778_RS08980 PF00392 Bacterial regulatory proteins, gntR family EB778_RS08985 PF00294 pfkB family carbohydrate kinase EB778_RS08990 PF03747 ADP-ribosylglycohydrolase EB778_RS08995 PF03825 Nucleoside H+ symporter EB778_RS09000 PF01791 DeoC/LacD family aldolase EB778_RS09005 PF00781 Diacylglycerol kinase catalytic domain EB778_RS09015 PF05932 Tir chaperone protein (CesT) family EB778_RS09025 PF01136 Peptidase family U32 EB778_RS09025 PF16325 Peptidase family U32 C-terminal domain EB778_RS09085 PF15606 Bacterial toxin 34 EB778_RS09085 PF03527 RHS protein EB778_RS09085 PF05593 RHS Repeat EB778_RS09090 PF03130 PBS lyase HEAT-like repeat EB778_RS09110 PF03811 InsA N-terminal domain EB778_RS09110 PF12759 InsA C-terminal domain EB778_RS09140 PF00072 Response regulator receiver domain EB778_RS09140 PF00486 Transcriptional regulatory protein, C terminal EB778_RS09145 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS09145 PF00672 HAMP domain EB778_RS09150 PF07690 Major Facilitator Superfamily EB778_RS09155 PF00873 AcrB/AcrD/AcrF family EB778_RS09160 PF00873 AcrB/AcrD/AcrF family EB778_RS09165 PF13533 Biotin-lipoyl like EB778_RS09175 PF00012 Hsp70 protein EB778_RS09180 PF06029 AlkA N-terminal domain EB778_RS09180 PF00730 HhH-GPD superfamily base excision DNA repair protein EB778_RS09185 PF13426 PAS domain EB778_RS09185 PF08448 PAS fold EB778_RS09185 PF08447 PAS fold EB778_RS09185 PF05231 MASE1 EB778_RS09185 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS09185 PF00563 EAL domain EB778_RS09190 PF00485 Phosphoribulokinase / Uridine kinase family EB778_RS09195 PF00692 dUTPase EB778_RS09200 PF05170 AsmA family EB778_RS09205 PF00571 CBS domain EB778_RS09205 PF03741 Integral membrane protein TerC family EB778_RS09205 PF03471 Transporter associated domain EB778_RS09210 PF02563 Polysaccharide biosynthesis/export protein EB778_RS09210 PF10531 SLBB domain EB778_RS09210 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EB778_RS09215 PF01451 Low molecular weight phosphotyrosine protein phosphatase EB778_RS09220 PF02706 Chain length determinant protein EB778_RS09220 PF13807 G-rich domain on putative tyrosine kinase EB778_RS09220 PF13614 AAA domain EB778_RS09225 PF00535 Glycosyl transferase family 2 EB778_RS09230 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS09235 PF00534 Glycosyl transferases group 1 EB778_RS09235 PF13439 Glycosyltransferase Family 4 EB778_RS09245 PF00535 Glycosyl transferase family 2 EB778_RS09250 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS09255 PF16363 GDP-mannose 4,6 dehydratase EB778_RS09260 PF01370 NAD dependent epimerase/dehydratase family EB778_RS09265 PF00293 NUDIX domain EB778_RS09270 PF00534 Glycosyl transferases group 1 EB778_RS09270 PF13579 Glycosyl transferase 4-like domain EB778_RS09275 PF01050 Mannose-6-phosphate isomerase EB778_RS09275 PF00483 Nucleotidyl transferase EB778_RS09280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EB778_RS09280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EB778_RS09280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EB778_RS09280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EB778_RS09285 PF02397 Bacterial sugar transferase EB778_RS09295 PF04230 Polysaccharide pyruvyl transferase EB778_RS09300 PF00534 Glycosyl transferases group 1 EB778_RS09300 PF13439 Glycosyltransferase Family 4 EB778_RS09310 PF00483 Nucleotidyl transferase EB778_RS09315 PF16363 GDP-mannose 4,6 dehydratase EB778_RS09320 PF04321 RmlD substrate binding domain EB778_RS09325 PF00483 Nucleotidyl transferase EB778_RS09330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EB778_RS09335 PF00175 Oxidoreductase NAD-binding domain EB778_RS09335 PF00970 Oxidoreductase FAD-binding domain EB778_RS09335 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS09340 PF00483 Nucleotidyl transferase EB778_RS09345 PF16363 GDP-mannose 4,6 dehydratase EB778_RS09350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EB778_RS09355 PF01370 NAD dependent epimerase/dehydratase family EB778_RS09365 PF00535 Glycosyl transferase family 2 EB778_RS09370 PF13439 Glycosyltransferase Family 4 EB778_RS09370 PF00534 Glycosyl transferases group 1 EB778_RS09375 PF00535 Glycosyl transferase family 2 EB778_RS09380 PF00483 Nucleotidyl transferase EB778_RS09380 PF01050 Mannose-6-phosphate isomerase EB778_RS09385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EB778_RS09385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EB778_RS09385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EB778_RS09385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EB778_RS09390 PF02397 Bacterial sugar transferase EB778_RS09395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EB778_RS09395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EB778_RS09400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EB778_RS09400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EB778_RS09405 PF02706 Chain length determinant protein EB778_RS09410 PF01502 Phosphoribosyl-AMP cyclohydrolase EB778_RS09410 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EB778_RS09415 PF00977 Histidine biosynthesis protein EB778_RS09420 PF00977 Histidine biosynthesis protein EB778_RS09425 PF00117 Glutamine amidotransferase class-I EB778_RS09430 PF00475 Imidazoleglycerol-phosphate dehydratase EB778_RS09435 PF00155 Aminotransferase class I and II EB778_RS09440 PF00815 Histidinol dehydrogenase EB778_RS09445 PF08029 HisG, C-terminal domain EB778_RS09445 PF01634 ATP phosphoribosyltransferase EB778_RS09455 PF01370 NAD dependent epimerase/dehydratase family EB778_RS09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS09460 PF03466 LysR substrate binding domain EB778_RS09470 PF13520 Amino acid permease EB778_RS09475 PF08411 Exonuclease C-terminal EB778_RS09475 PF00929 Exonuclease EB778_RS09480 PF13979 SopA-like catalytic domain EB778_RS09480 PF13981 SopA-like central domain EB778_RS09490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS09490 PF00384 Molybdopterin oxidoreductase EB778_RS09490 PF01568 Molydopterin dinucleotide binding domain EB778_RS09495 PF12800 4Fe-4S binding domain EB778_RS09495 PF13247 4Fe-4S dicluster domain EB778_RS09500 PF01292 Prokaryotic cytochrome b561 EB778_RS09505 PF07943 Penicillin-binding protein 5, C-terminal domain EB778_RS09505 PF00768 D-alanyl-D-alanine carboxypeptidase EB778_RS09510 PF06445 GyrI-like small molecule binding domain EB778_RS09515 PF04632 Fusaric acid resistance protein family EB778_RS09520 PF04363 Protein of unknown function (DUF496) EB778_RS09525 PF00288 GHMP kinases N terminal domain EB778_RS09530 PF00871 Acetokinase family EB778_RS09535 PF10662 Ethanolamine utilisation - propanediol utilisation EB778_RS09540 PF00936 BMC domain EB778_RS09550 PF13375 RnfC Barrel sandwich hybrid domain EB778_RS09550 PF10531 SLBB domain EB778_RS09550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EB778_RS09550 PF13237 4Fe-4S dicluster domain EB778_RS09555 PF00171 Aldehyde dehydrogenase family EB778_RS09555 PF00465 Iron-containing alcohol dehydrogenase EB778_RS09560 PF00171 Aldehyde dehydrogenase family EB778_RS09565 PF01923 Cobalamin adenosyltransferase EB778_RS09570 PF03319 Ethanolamine utilisation protein EutN/carboxysome EB778_RS09580 PF06130 Phosphate propanoyltransferase EB778_RS09585 PF00936 BMC domain EB778_RS09590 PF00936 BMC domain EB778_RS09600 PF18427 DD-reactivating factor swiveling domain EB778_RS09600 PF08841 Diol dehydratase reactivase ATPase-like domain EB778_RS09605 PF02287 Dehydratase small subunit EB778_RS09610 PF02288 Dehydratase medium subunit EB778_RS09615 PF02286 Dehydratase large subunit EB778_RS09620 PF00936 BMC domain EB778_RS09625 PF00936 BMC domain EB778_RS09630 PF00230 Major intrinsic protein EB778_RS09635 PF12833 Helix-turn-helix domain EB778_RS09635 PF10114 Sensory domain found in PocR EB778_RS09640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EB778_RS09640 PF07685 CobB/CobQ-like glutamine amidotransferase domain EB778_RS09645 PF03186 CobD/Cbib protein EB778_RS09650 PF02570 Precorrin-8X methylmutase EB778_RS09655 PF01888 CbiD EB778_RS09660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS09665 PF05175 Methyltransferase small domain EB778_RS09670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS09675 PF01890 Cobalamin synthesis G C-terminus EB778_RS09675 PF11760 Cobalamin synthesis G N-terminal EB778_RS09675 PF11761 Cobalamin biosynthesis central region EB778_RS09680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS09685 PF02571 Precorrin-6x reductase CbiJ/CobK EB778_RS09690 PF06180 Cobalt chelatase (CbiK) EB778_RS09695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EB778_RS09700 PF01891 Cobalt uptake substrate-specific transmembrane region EB778_RS09705 PF02553 Cobalt transport protein component CbiN EB778_RS09710 PF02361 Cobalt transport protein EB778_RS09715 PF00005 ABC transporter EB778_RS09720 PF07685 CobB/CobQ-like glutamine amidotransferase domain EB778_RS09725 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EB778_RS09730 PF02654 Cobalamin-5-phosphate synthase EB778_RS09735 PF02277 Phosphoribosyltransferase EB778_RS09740 PF03734 L,D-transpeptidase catalytic domain EB778_RS09740 PF17969 L,D-transpeptidase C-terminal domain EB778_RS09750 PF01022 Bacterial regulatory protein, arsR family EB778_RS09755 PF01451 Low molecular weight phosphotyrosine protein phosphatase EB778_RS09760 PF06953 Arsenical resistance operon trans-acting repressor ArsD EB778_RS09765 PF02374 Anion-transporting ATPase EB778_RS09770 PF01758 Sodium Bile acid symporter family EB778_RS09785 PF01554 MatE EB778_RS09810 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus EB778_RS09810 PF01048 Phosphorylase superfamily EB778_RS09880 PF00816 H-NS histone family EB778_RS09910 PF00293 NUDIX domain EB778_RS10035 PF00589 Phage integrase family EB778_RS10035 PF13356 Arm DNA-binding domain EB778_RS10055 PF06167 Glucose-regulated metallo-peptidase M90 EB778_RS10105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EB778_RS10110 PF02811 PHP domain EB778_RS10115 PF02613 Nitrate reductase delta subunit EB778_RS10120 PF06496 Protein of unknown function (DUF1097) EB778_RS10125 PF03783 Curli production assembly/transport component CsgG EB778_RS10130 PF10614 Type VIII secretion system (T8SS), CsgF protein EB778_RS10135 PF10627 Curli assembly protein CsgE EB778_RS10140 PF00196 Bacterial regulatory proteins, luxR family EB778_RS10145 PF07012 Curlin associated repeat EB778_RS10150 PF07012 Curlin associated repeat EB778_RS10155 PF10610 Thin aggregative fimbriae synthesis protein EB778_RS10165 PF01661 Macro domain EB778_RS10170 PF13091 PLD-like domain EB778_RS10175 PF01757 Acyltransferase family EB778_RS10180 PF04349 Periplasmic glucan biosynthesis protein, MdoG EB778_RS10185 PF00535 Glycosyl transferase family 2 EB778_RS10190 PF07119 Protein of unknown function (DUF1375) EB778_RS10195 PF13984 MsyB protein EB778_RS10200 PF07690 Major Facilitator Superfamily EB778_RS10205 PF03279 Bacterial lipid A biosynthesis acyltransferase EB778_RS10210 PF00581 Rhodanese-like domain EB778_RS10210 PF12368 Rhodanase C-terminal EB778_RS10210 PF17773 UPF0176 acylphosphatase like domain EB778_RS10215 PF04264 YceI-like domain EB778_RS10220 PF01292 Prokaryotic cytochrome b561 EB778_RS10225 PF10968 Protein of unknown function (DUF2770) EB778_RS10230 PF01266 FAD dependent oxidoreductase EB778_RS10235 PF13991 BssS protein family EB778_RS10240 PF06183 DinI-like family EB778_RS10245 PF01979 Amidohydrolase family EB778_RS10250 PF07273 Protein of unknown function (DUF1439) EB778_RS10255 PF04399 Glutaredoxin 2, C terminal domain EB778_RS10255 PF13417 Glutathione S-transferase, N-terminal domain EB778_RS10260 PF07690 Major Facilitator Superfamily EB778_RS10265 PF13302 Acetyltransferase (GNAT) domain EB778_RS10270 PF04337 Protein of unknown function, DUF480 EB778_RS10275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS10280 PF03023 Lipid II flippase MurJ EB778_RS10285 PF05130 FlgN protein EB778_RS10290 PF04316 Anti-sigma-28 factor, FlgM EB778_RS10295 PF13144 Chaperone for flagella basal body P-ring formation EB778_RS10300 PF00460 Flagella basal body rod protein EB778_RS10305 PF00460 Flagella basal body rod protein EB778_RS10305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EB778_RS10310 PF13860 FlgD Ig-like domain EB778_RS10310 PF13861 FlgD Tudor-like domain EB778_RS10310 PF03963 Flagellar hook capping protein - N-terminal region EB778_RS10315 PF07559 Flagellar basal body protein FlaE EB778_RS10315 PF00460 Flagella basal body rod protein EB778_RS10315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EB778_RS10320 PF00460 Flagella basal body rod protein EB778_RS10320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EB778_RS10325 PF00460 Flagella basal body rod protein EB778_RS10325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EB778_RS10330 PF02107 Flagellar L-ring protein EB778_RS10335 PF02119 Flagellar P-ring protein EB778_RS10340 PF10135 Rod binding protein EB778_RS10340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EB778_RS10345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EB778_RS10345 PF00460 Flagella basal body rod protein EB778_RS10350 PF00669 Bacterial flagellin N-terminal helical region EB778_RS10355 PF10150 Ribonuclease E/G family EB778_RS10355 PF12111 Polyribonucleotide phosphorylase C terminal EB778_RS10355 PF00575 S1 RNA binding domain EB778_RS10360 PF01479 S4 domain EB778_RS10360 PF00849 RNA pseudouridylate synthase EB778_RS10375 PF02545 Maf-like protein EB778_RS10380 PF02620 Large ribosomal RNA subunit accumulation protein YceD EB778_RS10385 PF01783 Ribosomal L32p protein family EB778_RS10390 PF02504 Fatty acid synthesis protein EB778_RS10395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EB778_RS10395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EB778_RS10400 PF00698 Acyl transferase domain EB778_RS10410 PF00550 Phosphopantetheine attachment site EB778_RS10415 PF02801 Beta-ketoacyl synthase, C-terminal domain EB778_RS10415 PF00109 Beta-ketoacyl synthase, N-terminal domain EB778_RS10420 PF01063 Amino-transferase class IV EB778_RS10425 PF02618 YceG-like family EB778_RS10430 PF02223 Thymidylate kinase EB778_RS10435 PF09115 DNA polymerase III, delta subunit, C terminal EB778_RS10440 PF01026 TatD related DNase EB778_RS10445 PF00367 phosphotransferase system, EIIB EB778_RS10445 PF02378 Phosphotransferase system, EIIC EB778_RS10450 PF00593 TonB dependent receptor EB778_RS10450 PF07715 TonB-dependent Receptor Plug Domain EB778_RS10455 PF01230 HIT domain EB778_RS10460 PF07233 Protein of unknown function (DUF1425) EB778_RS10465 PF13036 Peptidoglycan-synthase activator LpoB EB778_RS10470 PF01636 Phosphotransferase enzyme family EB778_RS10475 PF00933 Glycosyl hydrolase family 3 N terminal domain EB778_RS10480 PF05728 Uncharacterised protein family (UPF0227) EB778_RS10485 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS10490 PF05433 Glycine zipper 2TM domain EB778_RS10495 PF00440 Bacterial regulatory proteins, tetR family EB778_RS10500 PF07338 Protein of unknown function (DUF1471) EB778_RS10505 PF03734 L,D-transpeptidase catalytic domain EB778_RS10505 PF17969 L,D-transpeptidase C-terminal domain EB778_RS10505 PF01476 LysM domain EB778_RS10510 PF00270 DEAD/DEAH box helicase EB778_RS10510 PF03461 TRCF domain EB778_RS10510 PF02559 CarD-like/TRCF domain EB778_RS10510 PF17757 UvrB interaction domain EB778_RS10510 PF00271 Helicase conserved C-terminal domain EB778_RS10515 PF02687 FtsX-like permease family EB778_RS10515 PF12704 MacB-like periplasmic core domain EB778_RS10520 PF00005 ABC transporter EB778_RS10525 PF02687 FtsX-like permease family EB778_RS10525 PF12704 MacB-like periplasmic core domain EB778_RS10530 PF00480 ROK family EB778_RS10535 PF02146 Sir2 family EB778_RS10540 PF13416 Bacterial extracellular solute-binding protein EB778_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS10550 PF06767 Sif protein EB778_RS10555 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS10560 PF08402 TOBE domain EB778_RS10560 PF00005 ABC transporter EB778_RS10565 PF01546 Peptidase family M20/M25/M40 EB778_RS10565 PF07687 Peptidase dimerisation domain EB778_RS10575 PF08007 Cupin superfamily protein EB778_RS10580 PF08918 PhoQ Sensor EB778_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS10585 PF00072 Response regulator receiver domain EB778_RS10585 PF00486 Transcriptional regulatory protein, C terminal EB778_RS10590 PF00206 Lyase EB778_RS10590 PF08328 Adenylosuccinate lyase C-terminal EB778_RS10595 PF04356 Protein of unknown function (DUF489) EB778_RS10605 PF00293 NUDIX domain EB778_RS10615 PF00849 RNA pseudouridylate synthase EB778_RS10620 PF00180 Isocitrate/isopropylmalate dehydrogenase EB778_RS10650 PF06183 DinI-like family EB778_RS10655 PF00652 Ricin-type beta-trefoil lectin domain EB778_RS10660 PF00313 'Cold-shock' DNA-binding domain EB778_RS10680 PF06316 Enterobacterial Ail/Lom protein EB778_RS10705 PF00011 Hsp20/alpha crystallin family EB778_RS10715 PF01292 Prokaryotic cytochrome b561 EB778_RS10725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS10730 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS10735 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS10735 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS10740 PF00005 ABC transporter EB778_RS10745 PF00005 ABC transporter EB778_RS10750 PF00924 Mechanosensitive ion channel EB778_RS10765 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EB778_RS10770 PF01909 Nucleotidyltransferase domain EB778_RS10770 PF13427 Domain of unknown function (DUF4111) EB778_RS10780 PF09278 MerR, DNA binding EB778_RS10780 PF00376 MerR family regulatory protein EB778_RS10790 PF01817 Chorismate mutase type II EB778_RS10795 PF01810 LysE type translocator EB778_RS10800 PF09313 Domain of unknown function (DUF1971) EB778_RS10805 PF08956 Domain of unknown function (DUF1869) EB778_RS10820 PF04226 Transglycosylase associated protein EB778_RS10830 PF03891 Domain of unknown function (DUF333) EB778_RS10840 PF04343 Protein of unknown function, DUF488 EB778_RS10845 PF07690 Major Facilitator Superfamily EB778_RS10850 PF02311 AraC-like ligand binding domain EB778_RS10850 PF12833 Helix-turn-helix domain EB778_RS10855 PF04284 Protein of unknown function (DUF441) EB778_RS10865 PF04073 Aminoacyl-tRNA editing domain EB778_RS10870 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS10870 PF17155 Gammaproteobacterial periplasmic sensor domain EB778_RS10880 PF04285 Protein of unknown function (DUF444) EB778_RS10885 PF06798 PrkA serine protein kinase C-terminal domain EB778_RS10885 PF08298 PrkA AAA domain EB778_RS10890 PF06629 MltA-interacting protein MipA EB778_RS10895 PF04055 Radical SAM superfamily EB778_RS10895 PF13186 Iron-sulfur cluster-binding domain EB778_RS10900 PF00248 Aldo/keto reductase family EB778_RS10905 PF01263 Aldose 1-epimerase EB778_RS10910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EB778_RS10910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EB778_RS10915 PF01641 SelR domain EB778_RS10920 PF07023 Protein of unknown function (DUF1315) EB778_RS10925 PF00857 Isochorismatase family EB778_RS10930 PF00710 Asparaginase, N-terminal EB778_RS10930 PF17763 Glutaminase/Asparaginase C-terminal domain EB778_RS10935 PF01343 Peptidase family S49 EB778_RS10940 PF00881 Nitroreductase family EB778_RS10945 PF00586 AIR synthase related protein, N-terminal domain EB778_RS10945 PF02769 AIR synthase related protein, C-terminal domain EB778_RS10950 PF01751 Toprim domain EB778_RS10950 PF01131 DNA topoisomerase EB778_RS10955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EB778_RS10955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EB778_RS10960 PF07383 Protein of unknown function (DUF1496) EB778_RS10965 PF00293 NUDIX domain EB778_RS10970 PF03372 Endonuclease/Exonuclease/phosphatase family EB778_RS10975 PF00202 Aminotransferase class-III EB778_RS10980 PF04958 Arginine N-succinyltransferase beta subunit EB778_RS10985 PF00171 Aldehyde dehydrogenase family EB778_RS10990 PF04996 Succinylarginine dihydrolase EB778_RS10995 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EB778_RS11000 PF07813 LTXXQ motif family protein EB778_RS11010 PF02540 NAD synthase EB778_RS11015 PF04355 SmpA / OmlA family EB778_RS11020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS11025 PF02378 Phosphotransferase system, EIIC EB778_RS11030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EB778_RS11035 PF12833 Helix-turn-helix domain EB778_RS11035 PF07883 Cupin domain EB778_RS11040 PF11975 Family 4 glycosyl hydrolase C-terminal domain EB778_RS11040 PF02056 Family 4 glycosyl hydrolase EB778_RS11045 PF04794 YdjC-like protein EB778_RS11050 PF18011 C-terminal domain found in long catalases EB778_RS11050 PF06628 Catalase-related immune-responsive EB778_RS11050 PF00199 Catalase EB778_RS11055 PF10729 Cell division activator CedA EB778_RS11060 PF00375 Sodium:dicarboxylate symporter family EB778_RS11065 PF04307 LexA-binding, inner membrane-associated putative hydrolase EB778_RS11070 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS11075 PF14002 YniB-like protein EB778_RS11080 PF03881 Fructosamine kinase EB778_RS11085 PF11080 Endoribonuclease GhoS EB778_RS11090 PF00294 pfkB family carbohydrate kinase EB778_RS11095 PF04338 Protein of unknown function, DUF481 EB778_RS11110 PF01223 DNA/RNA non-specific endonuclease EB778_RS11130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EB778_RS11130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EB778_RS11130 PF02824 TGS domain EB778_RS11130 PF03129 Anticodon binding domain EB778_RS11135 PF00707 Translation initiation factor IF-3, C-terminal domain EB778_RS11135 PF05198 Translation initiation factor IF-3, N-terminal domain EB778_RS11140 PF01632 Ribosomal protein L35 EB778_RS11145 PF00453 Ribosomal protein L20 EB778_RS11155 PF01409 tRNA synthetases class II core domain (F) EB778_RS11155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EB778_RS11160 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EB778_RS11160 PF03483 B3/4 domain EB778_RS11160 PF03147 Ferredoxin-fold anticodon binding domain EB778_RS11160 PF01588 Putative tRNA binding domain EB778_RS11160 PF03484 tRNA synthetase B5 domain EB778_RS11165 PF00216 Bacterial DNA-binding protein EB778_RS11170 PF01032 FecCD transport family EB778_RS11175 PF00255 Glutathione peroxidase EB778_RS11180 PF00005 ABC transporter EB778_RS11185 PF00877 NlpC/P60 family EB778_RS11190 PF00563 EAL domain EB778_RS11195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EB778_RS11200 PF10636 Hemin uptake protein hemP EB778_RS11205 PF00793 DAHP synthetase I family EB778_RS11210 PF03618 Kinase/pyrophosphorylase EB778_RS11215 PF02896 PEP-utilising enzyme, TIM barrel domain EB778_RS11215 PF00391 PEP-utilising enzyme, mobile domain EB778_RS11215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EB778_RS11220 PF00501 AMP-binding enzyme EB778_RS11220 PF13193 AMP-binding enzyme C-terminal domain EB778_RS11230 PF01494 FAD binding domain EB778_RS11235 PF01012 Electron transfer flavoprotein domain EB778_RS11235 PF00766 Electron transfer flavoprotein FAD-binding domain EB778_RS11240 PF01012 Electron transfer flavoprotein domain EB778_RS11245 PF02311 AraC-like ligand binding domain EB778_RS11245 PF12833 Helix-turn-helix domain EB778_RS11250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EB778_RS11250 PF02770 Acyl-CoA dehydrogenase, middle domain EB778_RS11250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EB778_RS11255 PF01144 Coenzyme A transferase EB778_RS11260 PF01487 Type I 3-dehydroquinase EB778_RS11265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EB778_RS11265 PF08501 Shikimate dehydrogenase substrate binding domain EB778_RS11270 PF07690 Major Facilitator Superfamily EB778_RS11275 PF07690 Major Facilitator Superfamily EB778_RS11280 PF08965 Domain of unknown function (DUF1870) EB778_RS11290 PF01594 AI-2E family transporter EB778_RS11295 PF13183 4Fe-4S dicluster domain EB778_RS11295 PF02913 FAD linked oxidases, C-terminal domain EB778_RS11295 PF01565 FAD binding domain EB778_RS11300 PF03061 Thioesterase superfamily EB778_RS11305 PF15930 Domain of unknown function EB778_RS11310 PF00375 Sodium:dicarboxylate symporter family EB778_RS11315 PF01521 Iron-sulphur cluster biosynthesis EB778_RS11320 PF01458 Uncharacterized protein family (UPF0051) EB778_RS11325 PF00005 ABC transporter EB778_RS11330 PF01458 Uncharacterized protein family (UPF0051) EB778_RS11335 PF00266 Aminotransferase class-V EB778_RS11340 PF02657 Fe-S metabolism associated domain EB778_RS11345 PF03734 L,D-transpeptidase catalytic domain EB778_RS11345 PF17969 L,D-transpeptidase C-terminal domain EB778_RS11345 PF01476 LysM domain EB778_RS11350 PF04728 Lipoprotein leucine-zipper EB778_RS11355 PF04728 Lipoprotein leucine-zipper EB778_RS11360 PF02887 Pyruvate kinase, alpha/beta domain EB778_RS11360 PF00224 Pyruvate kinase, barrel domain EB778_RS11365 PF00324 Amino acid permease EB778_RS11370 PF00561 alpha/beta hydrolase fold EB778_RS11380 PF00294 pfkB family carbohydrate kinase EB778_RS11385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS11385 PF00384 Molybdopterin oxidoreductase EB778_RS11385 PF01568 Molydopterin dinucleotide binding domain EB778_RS11390 PF03916 Polysulphide reductase, NrfD EB778_RS11395 PF13247 4Fe-4S dicluster domain EB778_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS11400 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS11405 PF00072 Response regulator receiver domain EB778_RS11405 PF00196 Bacterial regulatory proteins, luxR family EB778_RS11410 PF10965 Protein of unknown function (DUF2767) EB778_RS11415 PF08349 Protein of unknown function (DUF1722) EB778_RS11420 PF13411 MerR HTH family regulatory protein EB778_RS11425 PF00196 Bacterial regulatory proteins, luxR family EB778_RS11425 PF00072 Response regulator receiver domain EB778_RS11430 PF00672 HAMP domain EB778_RS11430 PF01627 Hpt domain EB778_RS11430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EB778_RS11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS11430 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS11430 PF00072 Response regulator receiver domain EB778_RS11440 PF00263 Bacterial type II and III secretion system protein EB778_RS11440 PF03958 Bacterial type II/III secretion system short domain EB778_RS11460 PF03433 EspA-like secreted protein EB778_RS11470 PF04888 Secretion system effector C (SseC) like family EB778_RS11475 PF05802 Enterobacterial EspB protein EB778_RS11515 PF01514 Secretory protein of YscJ/FliF family EB778_RS11530 PF07201 HrpJ-like domain EB778_RS11540 PF00771 FHIPEP family EB778_RS11545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS11545 PF18269 T3SS EscN ATPase C-terminal domain EB778_RS11560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EB778_RS11565 PF00813 FliP family EB778_RS11570 PF01313 Bacterial export proteins, family 3 EB778_RS11575 PF01311 Bacterial export proteins, family 1 EB778_RS11580 PF01312 FlhB HrpN YscU SpaS Family EB778_RS11595 PF01554 MatE EB778_RS11600 PF00677 Lumazine binding domain EB778_RS11610 PF07690 Major Facilitator Superfamily EB778_RS11615 PF03466 LysR substrate binding domain EB778_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS11620 PF00356 Bacterial regulatory proteins, lacI family EB778_RS11630 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EB778_RS11630 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EB778_RS11635 PF00877 NlpC/P60 family EB778_RS11640 PF00462 Glutaredoxin EB778_RS11650 PF00929 Exonuclease EB778_RS11655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EB778_RS11660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EB778_RS11665 PF00440 Bacterial regulatory proteins, tetR family EB778_RS11665 PF16925 Tetracyclin repressor-like, C-terminal domain EB778_RS11670 PF06945 Protein of unknown function (DUF1289) EB778_RS11675 PF00248 Aldo/keto reductase family EB778_RS11680 PF00080 Copper/zinc superoxide dismutase (SODC) EB778_RS11685 PF04632 Fusaric acid resistance protein family EB778_RS11690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS11690 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS11695 PF07869 Protein of unknown function (DUF1656) EB778_RS11700 PF01047 MarR family EB778_RS11705 PF05433 Glycine zipper 2TM domain EB778_RS11710 PF03702 Anhydro-N-acetylmuramic acid kinase EB778_RS11715 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme EB778_RS11720 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EB778_RS11720 PF01243 Pyridoxamine 5'-phosphate oxidase EB778_RS11725 PF00579 tRNA synthetases class I (W and Y) EB778_RS11725 PF01479 S4 domain EB778_RS11730 PF08543 Phosphomethylpyrimidine kinase EB778_RS11735 PF02798 Glutathione S-transferase, N-terminal domain EB778_RS11735 PF00043 Glutathione S-transferase, C-terminal domain EB778_RS11740 PF00854 POT family EB778_RS11745 PF10576 Iron-sulfur binding domain of endonuclease III EB778_RS11745 PF00730 HhH-GPD superfamily base excision DNA repair protein EB778_RS11745 PF00633 Helix-hairpin-helix motif EB778_RS11750 PF02508 Rnf-Nqr subunit, membrane protein EB778_RS11755 PF04205 FMN-binding domain EB778_RS11760 PF03116 NQR2, RnfD, RnfE family EB778_RS11765 PF12838 4Fe-4S dicluster domain EB778_RS11765 PF10531 SLBB domain EB778_RS11765 PF13375 RnfC Barrel sandwich hybrid domain EB778_RS11765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EB778_RS11770 PF04060 Putative Fe-S cluster EB778_RS11775 PF02508 Rnf-Nqr subunit, membrane protein EB778_RS11780 PF10754 Protein of unknown function (DUF2569) EB778_RS11785 PF05321 Haemolysin expression modulating protein EB778_RS11795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EB778_RS11795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS11800 PF00962 Adenosine/AMP deaminase EB778_RS11805 PF00155 Aminotransferase class I and II EB778_RS11815 PF06097 Bacterial protein of unknown function (DUF945) EB778_RS11820 PF01238 Phosphomannose isomerase type I EB778_RS11825 PF05683 Fumarase C-terminus EB778_RS11825 PF05681 Fumarate hydratase (Fumerase) EB778_RS11830 PF10415 Fumarase C C-terminus EB778_RS11830 PF00206 Lyase EB778_RS11835 PF05472 DNA replication terminus site-binding protein (Ter protein) EB778_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS11840 PF00672 HAMP domain EB778_RS11840 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS11845 PF13382 Adenine deaminase C-terminal domain EB778_RS11845 PF01979 Amidohydrolase family EB778_RS11850 PF00267 Gram-negative porin EB778_RS11860 PF00072 Response regulator receiver domain EB778_RS11860 PF00486 Transcriptional regulatory protein, C terminal EB778_RS11865 PF06942 GlpM protein EB778_RS11870 PF13520 Amino acid permease EB778_RS11875 PF07338 Protein of unknown function (DUF1471) EB778_RS11880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EB778_RS11880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EB778_RS11880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EB778_RS11885 PF02233 NAD(P) transhydrogenase beta subunit EB778_RS11890 PF01594 AI-2E family transporter EB778_RS11900 PF00893 Small Multidrug Resistance protein EB778_RS11905 PF00893 Small Multidrug Resistance protein EB778_RS11910 PF00089 Trypsin EB778_RS11920 PF07690 Major Facilitator Superfamily EB778_RS11925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS11925 PF03466 LysR substrate binding domain EB778_RS11930 PF00480 ROK family EB778_RS11940 PF00654 Voltage gated chloride channel EB778_RS11945 PF00571 CBS domain EB778_RS11945 PF00005 ABC transporter EB778_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS11955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EB778_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS11965 PF02613 Nitrate reductase delta subunit EB778_RS11970 PF04976 DMSO reductase anchor subunit (DmsC) EB778_RS11975 PF13247 4Fe-4S dicluster domain EB778_RS11975 PF12800 4Fe-4S binding domain EB778_RS11980 PF00384 Molybdopterin oxidoreductase EB778_RS11980 PF01568 Molydopterin dinucleotide binding domain EB778_RS11980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS11985 PF01568 Molydopterin dinucleotide binding domain EB778_RS11985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS11985 PF00384 Molybdopterin oxidoreductase EB778_RS11990 PF06649 Protein of unknown function (DUF1161) EB778_RS11995 PF06788 Uncharacterised protein family (UPF0257) EB778_RS12000 PF13302 Acetyltransferase (GNAT) domain EB778_RS12005 PF06932 Protein of unknown function (DUF1283) EB778_RS12010 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EB778_RS12015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS12015 PF13378 Enolase C-terminal domain-like EB778_RS12020 PF00107 Zinc-binding dehydrogenase EB778_RS12020 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12030 PF01232 Mannitol dehydrogenase Rossmann domain EB778_RS12030 PF08125 Mannitol dehydrogenase C-terminal domain EB778_RS12035 PF14001 YdfZ protein EB778_RS12040 PF07729 FCD domain EB778_RS12040 PF00392 Bacterial regulatory proteins, gntR family EB778_RS12045 PF00106 short chain dehydrogenase EB778_RS12050 PF01432 Peptidase family M3 EB778_RS12060 PF10685 Stress-induced bacterial acidophilic repeat motif EB778_RS12065 PF02464 Competence-damaged protein EB778_RS12070 PF04076 Bacterial OB fold (BOF) protein EB778_RS12080 PF07690 Major Facilitator Superfamily EB778_RS12085 PF00892 EamA-like transporter family EB778_RS12090 PF13999 MarB protein EB778_RS12095 PF12833 Helix-turn-helix domain EB778_RS12100 PF01047 MarR family EB778_RS12105 PF01914 MarC family integral membrane protein EB778_RS12110 PF07690 Major Facilitator Superfamily EB778_RS12115 PF03466 LysR substrate binding domain EB778_RS12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS12120 PF00171 Aldehyde dehydrogenase family EB778_RS12125 PF04960 Glutaminase EB778_RS12130 PF13811 Domain of unknown function (DUF4186) EB778_RS12135 PF01062 Bestrophin, RFP-TM, chloride channel EB778_RS12145 PF00267 Gram-negative porin EB778_RS12150 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EB778_RS12160 PF04809 HupH hydrogenase expression protein, C-terminal conserved region EB778_RS12170 PF01455 HupF/HypC family EB778_RS12175 PF01750 Hydrogenase maturation protease EB778_RS12180 PF01292 Prokaryotic cytochrome b561 EB778_RS12185 PF00374 Nickel-dependent hydrogenase EB778_RS12190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EB778_RS12190 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EB778_RS12200 PF07729 FCD domain EB778_RS12200 PF00392 Bacterial regulatory proteins, gntR family EB778_RS12205 PF00107 Zinc-binding dehydrogenase EB778_RS12205 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12210 PF07690 Major Facilitator Superfamily EB778_RS12220 PF07690 Major Facilitator Superfamily EB778_RS12225 PF01494 FAD binding domain EB778_RS12235 PF02547 Queuosine biosynthesis protein EB778_RS12240 PF01042 Endoribonuclease L-PSP EB778_RS12265 PF03611 PTS system sugar-specific permease component EB778_RS12270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS12270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS12275 PF00107 Zinc-binding dehydrogenase EB778_RS12275 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12280 PF07702 UTRA domain EB778_RS12280 PF00392 Bacterial regulatory proteins, gntR family EB778_RS12285 PF01116 Fructose-bisphosphate aldolase class-II EB778_RS12295 PF01975 Survival protein SurE EB778_RS12300 PF00107 Zinc-binding dehydrogenase EB778_RS12300 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12320 PF03466 LysR substrate binding domain EB778_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS12325 PF03060 Nitronate monooxygenase EB778_RS12335 PF00356 Bacterial regulatory proteins, lacI family EB778_RS12340 PF03553 Na+/H+ antiporter family EB778_RS12345 PF00155 Aminotransferase class I and II EB778_RS12350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EB778_RS12350 PF00128 Alpha amylase, catalytic domain EB778_RS12355 PF00128 Alpha amylase, catalytic domain EB778_RS12360 PF11941 Domain of unknown function (DUF3459) EB778_RS12360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EB778_RS12360 PF00128 Alpha amylase, catalytic domain EB778_RS12370 PF06411 HdeA/HdeB family EB778_RS12375 PF02566 OsmC-like protein EB778_RS12380 PF10684 Putative biofilm-dependent modulation protein EB778_RS12385 PF08136 30S ribosomal protein subunit S22 family EB778_RS12390 PF00390 Malic enzyme, N-terminal domain EB778_RS12390 PF03949 Malic enzyme, NAD binding domain EB778_RS12395 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12395 PF00107 Zinc-binding dehydrogenase EB778_RS12400 PF01292 Prokaryotic cytochrome b561 EB778_RS12405 PF13247 4Fe-4S dicluster domain EB778_RS12405 PF12800 4Fe-4S binding domain EB778_RS12405 PF09163 Formate dehydrogenase N, transmembrane EB778_RS12415 PF00892 EamA-like transporter family EB778_RS12420 PF00267 Gram-negative porin EB778_RS12430 PF07690 Major Facilitator Superfamily EB778_RS12435 PF00440 Bacterial regulatory proteins, tetR family EB778_RS12440 PF07690 Major Facilitator Superfamily EB778_RS12450 PF13247 4Fe-4S dicluster domain EB778_RS12450 PF14711 Respiratory nitrate reductase beta C-terminal EB778_RS12455 PF02613 Nitrate reductase delta subunit EB778_RS12460 PF02665 Nitrate reductase gamma subunit EB778_RS12465 PF02567 Phenazine biosynthesis-like protein EB778_RS12470 PF00797 N-acetyltransferase EB778_RS12485 PF00324 Amino acid permease EB778_RS12490 PF06004 Bacterial protein of unknown function (DUF903) EB778_RS12500 PF00593 TonB dependent receptor EB778_RS12500 PF07715 TonB-dependent Receptor Plug Domain EB778_RS12505 PF00392 Bacterial regulatory proteins, gntR family EB778_RS12505 PF07729 FCD domain EB778_RS12510 PF16884 N-terminal domain of oxidoreductase EB778_RS12510 PF00107 Zinc-binding dehydrogenase EB778_RS12520 PF04657 Putative inner membrane exporter, YdcZ EB778_RS12525 PF10735 Protein of unknown function (DUF2526) EB778_RS12545 PF10753 Toxin GhoT_OrtT EB778_RS12555 PF00171 Aldehyde dehydrogenase family EB778_RS12560 PF00155 Aminotransferase class I and II EB778_RS12560 PF00392 Bacterial regulatory proteins, gntR family EB778_RS12565 PF01427 D-ala-D-ala dipeptidase EB778_RS12580 PF06767 Sif protein EB778_RS12585 PF10829 Protein of unknown function (DUF2554) EB778_RS12590 PF01136 Peptidase family U32 EB778_RS12590 PF12392 Collagenase EB778_RS12595 PF01381 Helix-turn-helix EB778_RS12595 PF07883 Cupin domain EB778_RS12600 PF03594 Benzoate membrane transport protein EB778_RS12605 PF11769 Protein of unknown function (DUF3313) EB778_RS12610 PF03848 Tellurite resistance protein TehB EB778_RS12615 PF03595 Voltage-dependent anion channel EB778_RS12620 PF18836 Beta solenoid repeat from YDCK EB778_RS12625 PF13302 Acetyltransferase (GNAT) domain EB778_RS12630 PF05343 M42 glutamyl aminopeptidase EB778_RS12635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS12640 PF03611 PTS system sugar-specific permease component EB778_RS12645 PF03437 BtpA family EB778_RS12650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS12655 PF00834 Ribulose-phosphate 3 epimerase family EB778_RS12660 PF08220 DeoR-like helix-turn-helix domain EB778_RS12660 PF00455 DeoR C terminal sensor domain EB778_RS12665 PF00583 Acetyltransferase (GNAT) family EB778_RS12670 PF01070 FMN-dependent dehydrogenase EB778_RS12675 PF04264 YceI-like domain EB778_RS12680 PF04349 Periplasmic glucan biosynthesis protein, MdoG EB778_RS12685 PF00135 Carboxylesterase family EB778_RS12690 PF07063 Domain of unknown function (DUF1338) EB778_RS12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS12695 PF03466 LysR substrate binding domain EB778_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS12700 PF02203 Tar ligand binding domain homologue EB778_RS12700 PF00672 HAMP domain EB778_RS12705 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS12705 PF00107 Zinc-binding dehydrogenase EB778_RS12710 PF02583 Metal-sensitive transcriptional repressor EB778_RS12725 PF06767 Sif protein EB778_RS12725 PF00657 GDSL-like Lipase/Acylhydrolase EB778_RS12735 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS12740 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS12745 PF00005 ABC transporter EB778_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS12760 PF08242 Methyltransferase domain EB778_RS12765 PF01292 Prokaryotic cytochrome b561 EB778_RS12770 PF02698 DUF218 domain EB778_RS12775 PF04408 Helicase associated domain (HA2) EB778_RS12775 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EB778_RS12775 PF00271 Helicase conserved C-terminal domain EB778_RS12775 PF11898 Domain of unknown function (DUF3418) EB778_RS12775 PF00270 DEAD/DEAH box helicase EB778_RS12780 PF02525 Flavodoxin-like fold EB778_RS12790 PF07027 Protein of unknown function (DUF1318) EB778_RS12795 PF13617 YnbE-like lipoprotein EB778_RS12800 PF11739 Dicarboxylate transport EB778_RS12805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EB778_RS12805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EB778_RS12810 PF03724 META domain EB778_RS12815 PF03891 Domain of unknown function (DUF333) EB778_RS12825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EB778_RS12825 PF10371 Domain of unknown function EB778_RS12825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EB778_RS12825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EB778_RS12825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS12830 PF00582 Universal stress protein family EB778_RS12835 PF00893 Small Multidrug Resistance protein EB778_RS12850 PF01171 PP-loop family EB778_RS12855 PF03880 DbpA RNA binding domain EB778_RS12855 PF00270 DEAD/DEAH box helicase EB778_RS12855 PF00271 Helicase conserved C-terminal domain EB778_RS12865 PF01544 CorA-like Mg2+ transporter protein EB778_RS12870 PF02203 Tar ligand binding domain homologue EB778_RS12870 PF00672 HAMP domain EB778_RS12870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS12875 PF01713 Smr domain EB778_RS12880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EB778_RS12880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EB778_RS12885 PF13545 Crp-like helix-turn-helix domain EB778_RS12885 PF00027 Cyclic nucleotide-binding domain EB778_RS12890 PF00582 Universal stress protein family EB778_RS12895 PF10749 Protein of unknown function (DUF2534) EB778_RS12900 PF00924 Mechanosensitive ion channel EB778_RS12920 PF08534 Redoxin EB778_RS12940 PF06445 GyrI-like small molecule binding domain EB778_RS12940 PF12833 Helix-turn-helix domain EB778_RS12955 PF00440 Bacterial regulatory proteins, tetR family EB778_RS12965 PF00248 Aldo/keto reductase family EB778_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS12970 PF03466 LysR substrate binding domain EB778_RS12980 PF01053 Cys/Met metabolism PLP-dependent enzyme EB778_RS12985 PF03222 Tryptophan/tyrosine permease family EB778_RS12990 PF01042 Endoribonuclease L-PSP EB778_RS12995 PF03466 LysR substrate binding domain EB778_RS12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS13000 PF03466 LysR substrate binding domain EB778_RS13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS13015 PF02627 Carboxymuconolactone decarboxylase family EB778_RS13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS13025 PF00246 Zinc carboxypeptidase EB778_RS13030 PF13378 Enolase C-terminal domain-like EB778_RS13030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EB778_RS13035 PF08534 Redoxin EB778_RS13040 PF00158 Sigma-54 interaction domain EB778_RS13040 PF18024 Helix-turn-helix domain EB778_RS13045 PF05128 Domain of unknown function (DUF697) EB778_RS13050 PF04317 YcjX-like family, DUF463 EB778_RS13055 PF00581 Rhodanese-like domain EB778_RS13060 PF09584 Phage shock protein PspD (Phageshock_PspD) EB778_RS13065 PF04024 PspC domain EB778_RS13070 PF06667 Phage shock protein B EB778_RS13075 PF04012 PspA/IM30 family EB778_RS13080 PF02954 Bacterial regulatory protein, Fis family EB778_RS13080 PF00158 Sigma-54 interaction domain EB778_RS13085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS13090 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS13095 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS13095 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS13100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS13100 PF00005 ABC transporter EB778_RS13105 PF00005 ABC transporter EB778_RS13140 PF00575 S1 RNA binding domain EB778_RS13140 PF00773 RNB domain EB778_RS13140 PF17876 Cold shock domain EB778_RS13140 PF08206 Ribonuclease B OB domain EB778_RS13145 PF13426 PAS domain EB778_RS13145 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS13145 PF00563 EAL domain EB778_RS13155 PF00455 DeoR C terminal sensor domain EB778_RS13155 PF08220 DeoR-like helix-turn-helix domain EB778_RS13160 PF05433 Glycine zipper 2TM domain EB778_RS13165 PF01253 Translation initiation factor SUI1 EB778_RS13170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EB778_RS13175 PF18073 Rubredoxin metal binding domain EB778_RS13180 PF06305 Lipopolysaccharide assembly protein A domain EB778_RS13185 PF01569 PAP2 superfamily EB778_RS13190 PF00925 GTP cyclohydrolase II EB778_RS13195 PF00694 Aconitase C-terminal domain EB778_RS13195 PF00330 Aconitase family (aconitate hydratase) EB778_RS13210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS13210 PF03466 LysR substrate binding domain EB778_RS13220 PF01131 DNA topoisomerase EB778_RS13220 PF08272 Topoisomerase I zinc-ribbon-like EB778_RS13220 PF01396 Topoisomerase DNA binding C4 zinc finger EB778_RS13220 PF01751 Toprim domain EB778_RS13225 PF10692 Protein of unknown function (DUF2498) EB778_RS13230 PF01343 Peptidase family S49 EB778_RS13230 PF08496 Peptidase family S49 N-terminal EB778_RS13235 PF00106 short chain dehydrogenase EB778_RS13240 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EB778_RS13245 PF01479 S4 domain EB778_RS13245 PF00849 RNA pseudouridylate synthase EB778_RS13250 PF01300 Telomere recombination EB778_RS13255 PF02811 PHP domain EB778_RS13260 PF08255 Trp-operon Leader Peptide EB778_RS13265 PF00425 chorismate binding enzyme EB778_RS13265 PF04715 Anthranilate synthase component I, N terminal region EB778_RS13270 PF00117 Glutamine amidotransferase class-I EB778_RS13270 PF02885 Glycosyl transferase family, helical bundle domain EB778_RS13270 PF00591 Glycosyl transferase family, a/b domain EB778_RS13275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EB778_RS13275 PF00218 Indole-3-glycerol phosphate synthase EB778_RS13280 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS13285 PF00290 Tryptophan synthase alpha chain EB778_RS13290 PF10685 Stress-induced bacterial acidophilic repeat motif EB778_RS13295 PF05974 Domain of unknown function (DUF892) EB778_RS13300 PF05974 Domain of unknown function (DUF892) EB778_RS13305 PF05067 Manganese containing catalase EB778_RS13310 PF03922 OmpW family EB778_RS13315 PF03692 Putative zinc- or iron-chelating domain EB778_RS13325 PF04279 Intracellular septation protein A EB778_RS13330 PF03061 Thioesterase superfamily EB778_RS13335 PF03544 Gram-negative bacterial TonB protein C-terminal EB778_RS13340 PF03795 YCII-related domain EB778_RS13350 PF13091 PLD-like domain EB778_RS13350 PF13396 Phospholipase_D-nuclease N-terminal EB778_RS13355 PF04269 Protein of unknown function, DUF440 EB778_RS13360 PF00520 Ion transport protein EB778_RS13360 PF00027 Cyclic nucleotide-binding domain EB778_RS13365 PF00005 ABC transporter EB778_RS13365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS13370 PF00005 ABC transporter EB778_RS13370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS13375 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS13390 PF01914 MarC family integral membrane protein EB778_RS13395 PF00171 Aldehyde dehydrogenase family EB778_RS13395 PF00465 Iron-containing alcohol dehydrogenase EB778_RS13400 PF00265 Thymidine kinase EB778_RS13405 PF00816 H-NS histone family EB778_RS13410 PF00483 Nucleotidyl transferase EB778_RS13415 PF00072 Response regulator receiver domain EB778_RS13420 PF01734 Patatin-like phospholipase EB778_RS13425 PF02810 SEC-C motif EB778_RS13430 PF00551 Formyl transferase EB778_RS13430 PF01842 ACT domain EB778_RS13470 PF02665 Nitrate reductase gamma subunit EB778_RS13475 PF02613 Nitrate reductase delta subunit EB778_RS13480 PF14711 Respiratory nitrate reductase beta C-terminal EB778_RS13480 PF13247 4Fe-4S dicluster domain EB778_RS13485 PF14710 Respiratory nitrate reductase alpha N-terminal EB778_RS13485 PF01568 Molydopterin dinucleotide binding domain EB778_RS13485 PF00384 Molybdopterin oxidoreductase EB778_RS13490 PF07690 Major Facilitator Superfamily EB778_RS13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS13495 PF00672 HAMP domain EB778_RS13495 PF07730 Histidine kinase EB778_RS13495 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EB778_RS13500 PF00072 Response regulator receiver domain EB778_RS13500 PF00196 Bacterial regulatory proteins, luxR family EB778_RS13505 PF11924 Inverse autotransporter, beta-domain EB778_RS13510 PF02635 DsrE/DsrF-like family EB778_RS13515 PF06150 ChaB EB778_RS13520 PF01699 Sodium/calcium exchanger protein EB778_RS13525 PF00793 DAHP synthetase I family EB778_RS13530 PF13369 Transglutaminase-like superfamily EB778_RS13535 PF04247 Invasion gene expression up-regulator, SirB EB778_RS13540 PF13847 Methyltransferase domain EB778_RS13540 PF17827 PrmC N-terminal domain EB778_RS13545 PF00472 RF-1 domain EB778_RS13545 PF03462 PCRF domain EB778_RS13550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EB778_RS13550 PF01488 Shikimate / quinate 5-dehydrogenase EB778_RS13550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EB778_RS13555 PF03550 Outer membrane lipoprotein LolB EB778_RS13560 PF00288 GHMP kinases N terminal domain EB778_RS13560 PF08544 GHMP kinases C terminal EB778_RS13565 PF14572 Phosphoribosyl synthetase-associated domain EB778_RS13565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EB778_RS13570 PF00916 Sulfate permease family EB778_RS13570 PF01740 STAS domain EB778_RS13575 PF10762 Protein of unknown function (DUF2583) EB778_RS13580 PF01195 Peptidyl-tRNA hydrolase EB778_RS13585 PF06071 Protein of unknown function (DUF933) EB778_RS13585 PF01926 50S ribosome-binding GTPase EB778_RS13605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EB778_RS13605 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EB778_RS13610 PF00374 Nickel-dependent hydrogenase EB778_RS13615 PF01292 Prokaryotic cytochrome b561 EB778_RS13620 PF01750 Hydrogenase maturation protease EB778_RS13625 PF07449 Hydrogenase-1 expression protein HyaE EB778_RS13630 PF04809 HupH hydrogenase expression protein, C-terminal conserved region EB778_RS13635 PF01654 Cytochrome bd terminal oxidase subunit I EB778_RS13640 PF02322 Cytochrome bd terminal oxidase subunit II EB778_RS13645 PF08173 Membrane bound YbgT-like protein EB778_RS13650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EB778_RS13650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EB778_RS13655 PF01204 Trehalase EB778_RS13660 PF04226 Transglycosylase associated protein EB778_RS13665 PF07238 PilZ domain EB778_RS13665 PF07317 Flagellar regulator YcgR EB778_RS13670 PF01464 Transglycosylase SLT domain EB778_RS13675 PF17676 LD-carboxypeptidase C-terminal domain EB778_RS13675 PF02016 LD-carboxypeptidase N-terminal domain EB778_RS13680 PF00999 Sodium/hydrogen exchanger family EB778_RS13680 PF03471 Transporter associated domain EB778_RS13680 PF02080 TrkA-C domain EB778_RS13685 PF00842 Alanine racemase, C-terminal domain EB778_RS13685 PF01168 Alanine racemase, N-terminal domain EB778_RS13690 PF01266 FAD dependent oxidoreductase EB778_RS13695 PF04293 SpoVR like protein EB778_RS13700 PF00392 Bacterial regulatory proteins, gntR family EB778_RS13700 PF07840 FadR C-terminal domain EB778_RS13705 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EB778_RS13710 PF02600 Disulfide bond formation protein DsbB EB778_RS13720 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system EB778_RS13730 PF03692 Putative zinc- or iron-chelating domain EB778_RS13735 PF01557 Fumarylacetoacetate (FAA) hydrolase family EB778_RS13740 PF05166 YcgL domain EB778_RS13745 PF05209 Septum formation inhibitor MinC, N-terminal domain EB778_RS13745 PF03775 Septum formation inhibitor MinC, C-terminal domain EB778_RS13750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EB778_RS13755 PF03776 Septum formation topological specificity factor MinE EB778_RS13760 PF00570 HRDC domain EB778_RS13760 PF01612 3'-5' exonuclease EB778_RS13765 PF00501 AMP-binding enzyme EB778_RS13765 PF13193 AMP-binding enzyme C-terminal domain EB778_RS13770 PF03843 Outer membrane lipoprotein Slp family EB778_RS13775 PF00814 Glycoprotease family EB778_RS13780 PF04851 Type III restriction enzyme, res subunit EB778_RS13780 PF13307 Helicase C-terminal domain EB778_RS13785 PF01042 Endoribonuclease L-PSP EB778_RS13790 PF03701 Uncharacterised protein family (UPF0181) EB778_RS13795 PF00425 chorismate binding enzyme EB778_RS13795 PF04715 Anthranilate synthase component I, N terminal region EB778_RS13800 PF00293 NUDIX domain EB778_RS13805 PF03315 Serine dehydratase beta chain EB778_RS13805 PF03313 Serine dehydratase alpha chain EB778_RS13810 PF00563 EAL domain EB778_RS13810 PF12792 CSS motif domain associated with EAL EB778_RS13815 PF03741 Integral membrane protein TerC family EB778_RS13815 PF03471 Transporter associated domain EB778_RS13820 PF03610 PTS system fructose IIA component EB778_RS13820 PF03830 PTS system sorbose subfamily IIB component EB778_RS13825 PF03609 PTS system sorbose-specific iic component EB778_RS13830 PF03613 PTS system mannose/fructose/sorbose family IID component EB778_RS13835 PF06173 Protein of unknown function (DUF986) EB778_RS13840 PF02659 Putative manganese efflux pump EB778_RS13845 PF13847 Methyltransferase domain EB778_RS13850 PF00905 Penicillin binding protein transpeptidase domain EB778_RS13850 PF03717 Penicillin-binding Protein dimerisation domain EB778_RS13855 PF00313 'Cold-shock' DNA-binding domain EB778_RS13860 PF10736 Protein of unknown function (DUF2627) EB778_RS13865 PF13974 YebO-like protein EB778_RS13870 PF13998 MgrB protein EB778_RS13875 PF13996 YobH-like protein EB778_RS13880 PF01614 Bacterial transcriptional regulator EB778_RS13880 PF09339 IclR helix-turn-helix domain EB778_RS13885 PF07690 Major Facilitator Superfamily EB778_RS13890 PF01435 Peptidase family M48 EB778_RS13895 PF17804 Tail specific protease N-terminal domain EB778_RS13895 PF11818 C-terminal domain of tail specific protease (DUF3340) EB778_RS13895 PF00595 PDZ domain EB778_RS13895 PF03572 Peptidase family S41 EB778_RS13900 PF17516 ProQ C-terminal domain EB778_RS13900 PF04352 ProQ/FINO family EB778_RS13905 PF13185 GAF domain EB778_RS13910 PF04403 Paraquat-inducible protein A EB778_RS13915 PF02470 MlaD protein EB778_RS13920 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF EB778_RS13920 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EB778_RS13920 PF01189 16S rRNA methyltransferase RsmB/F EB778_RS13925 PF07351 Protein of unknown function (DUF1480) EB778_RS13930 PF07358 Protein of unknown function (DUF1482) EB778_RS13935 PF00149 Calcineurin-like phosphoesterase EB778_RS13945 PF07487 SopE GEF domain EB778_RS13945 PF05364 Salmonella type III secretion SopE effector N-terminus EB778_RS13950 PF07166 Protein of unknown function (DUF1398) EB778_RS13960 PF00583 Acetyltransferase (GNAT) family EB778_RS13970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EB778_RS13970 PF02824 TGS domain EB778_RS13970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EB778_RS13970 PF03129 Anticodon binding domain EB778_RS13990 PF14496 C-terminal novel E3 ligase, LRR-interacting EB778_RS13990 PF12468 Type III secretion system leucine rich repeat protein EB778_RS14005 PF10709 Protein of unknown function (DUF2511) EB778_RS14010 PF05425 Copper resistance protein D EB778_RS14015 PF04234 CopC domain EB778_RS14020 PF06440 DNA polymerase III, theta subunit EB778_RS14025 PF00795 Carbon-nitrogen hydrolase EB778_RS14030 PF00929 Exonuclease EB778_RS14035 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EB778_RS14035 PF00326 Prolyl oligopeptidase family EB778_RS14040 PF04391 Protein of unknown function (DUF533) EB778_RS14045 PF13995 YebF-like protein EB778_RS14050 PF07130 YebG protein EB778_RS14055 PF02222 ATP-grasp domain EB778_RS14060 PF01081 KDPG and KHG aldolase EB778_RS14065 PF00920 Dehydratase family EB778_RS14070 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EB778_RS14070 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EB778_RS14075 PF01418 Helix-turn-helix domain, rpiR family EB778_RS14075 PF01380 SIS domain EB778_RS14080 PF00224 Pyruvate kinase, barrel domain EB778_RS14080 PF02887 Pyruvate kinase, alpha/beta domain EB778_RS14085 PF03279 Bacterial lipid A biosynthesis acyltransferase EB778_RS14090 PF01551 Peptidase family M23 EB778_RS14090 PF08525 Opacity-associated protein A N-terminal motif EB778_RS14090 PF01476 LysM domain EB778_RS14095 PF01297 Zinc-uptake complex component A periplasmic EB778_RS14100 PF00005 ABC transporter EB778_RS14105 PF00950 ABC 3 transport family EB778_RS14110 PF17864 RuvB AAA lid domain EB778_RS14110 PF05491 RuvB C-terminal winged helix domain EB778_RS14110 PF05496 Holliday junction DNA helicase RuvB P-loop domain EB778_RS14115 PF01330 RuvA N terminal domain EB778_RS14115 PF07499 RuvA, C-terminal domain EB778_RS14125 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family EB778_RS14130 PF02075 Crossover junction endodeoxyribonuclease RuvC EB778_RS14135 PF01709 Transcriptional regulator EB778_RS14140 PF00293 NUDIX domain EB778_RS14145 PF02938 GAD domain EB778_RS14145 PF01336 OB-fold nucleic acid binding domain EB778_RS14145 PF00152 tRNA synthetases class II (D, K and N) EB778_RS14150 PF00857 Isochorismatase family EB778_RS14155 PF01904 Protein of unknown function DUF72 EB778_RS14160 PF01124 MAPEG family EB778_RS14165 PF13649 Methyltransferase domain EB778_RS14170 PF08003 Protein of unknown function (DUF1698) EB778_RS14175 PF03932 CutC family EB778_RS14180 PF06185 YecM protein EB778_RS14185 PF03485 Arginyl tRNA synthetase N terminal domain EB778_RS14185 PF00750 tRNA synthetases class I (R) EB778_RS14185 PF05746 DALR anticodon binding domain EB778_RS14190 PF00905 Penicillin binding protein transpeptidase domain EB778_RS14190 PF03717 Penicillin-binding Protein dimerisation domain EB778_RS14195 PF07470 Glycosyl Hydrolase Family 88 EB778_RS14200 PF06366 Flagellar protein FlhE EB778_RS14205 PF00771 FHIPEP family EB778_RS14210 PF01312 FlhB HrpN YscU SpaS Family EB778_RS14215 PF04344 Chemotaxis phosphatase, CheZ EB778_RS14220 PF00072 Response regulator receiver domain EB778_RS14225 PF01339 CheB methylesterase EB778_RS14225 PF00072 Response regulator receiver domain EB778_RS14230 PF03705 CheR methyltransferase, all-alpha domain EB778_RS14230 PF01739 CheR methyltransferase, SAM binding domain EB778_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EB778_RS14235 PF02203 Tar ligand binding domain homologue EB778_RS14235 PF00672 HAMP domain EB778_RS14240 PF01584 CheW-like domain EB778_RS14245 PF01584 CheW-like domain EB778_RS14245 PF01627 Hpt domain EB778_RS14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS14245 PF02895 Signal transducing histidine kinase, homodimeric domain EB778_RS14245 PF09078 CheY binding EB778_RS14250 PF13677 Membrane MotB of proton-channel complex MotA/MotB EB778_RS14250 PF00691 OmpA family EB778_RS14255 PF01618 MotA/TolQ/ExbB proton channel family EB778_RS14260 PF05280 Flagellar transcriptional activator (FlhC) EB778_RS14265 PF05247 Flagellar transcriptional activator (FlhD) EB778_RS14275 PF00582 Universal stress protein family EB778_RS14280 PF00982 Glycosyltransferase family 20 EB778_RS14285 PF02358 Trehalose-phosphatase EB778_RS14300 PF00210 Ferritin-like domain EB778_RS14310 PF13992 YecR-like lipoprotein EB778_RS14315 PF00210 Ferritin-like domain EB778_RS14320 PF10678 Protein of unknown function (DUF2492) EB778_RS14325 PF03222 Tryptophan/tyrosine permease family EB778_RS14330 PF03695 Uncharacterised protein family (UPF0149) EB778_RS14330 PF02810 SEC-C motif EB778_RS14365 PF01066 CDP-alcohol phosphatidyltransferase EB778_RS14370 PF01541 GIY-YIG catalytic domain EB778_RS14370 PF02151 UvrB/uvrC motif EB778_RS14370 PF08459 UvrC Helix-hairpin-helix N-terminal EB778_RS14375 PF00072 Response regulator receiver domain EB778_RS14375 PF00196 Bacterial regulatory proteins, luxR family EB778_RS14385 PF10769 Protein of unknown function (DUF2594) EB778_RS14390 PF00196 Bacterial regulatory proteins, luxR family EB778_RS14390 PF03472 Autoinducer binding domain EB778_RS14395 PF00005 ABC transporter EB778_RS14400 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS14405 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS14410 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS14415 PF02899 Phage integrase, N-terminal SAM-like domain EB778_RS14420 PF04542 Sigma-70 region 2 EB778_RS14420 PF04539 Sigma-70 region 3 EB778_RS14420 PF04545 Sigma-70, region 4 EB778_RS14430 PF00700 Bacterial flagellin C-terminal helical region EB778_RS14430 PF00669 Bacterial flagellin N-terminal helical region EB778_RS14440 PF02465 Flagellar hook-associated protein 2 N-terminus EB778_RS14440 PF07195 Flagellar hook-associated protein 2 C-terminus EB778_RS14440 PF07196 Flagellin hook IN motif EB778_RS14445 PF02561 Flagellar protein FliS EB778_RS14450 PF05400 Flagellar protein FliT EB778_RS14455 PF02806 Alpha amylase, C-terminal all-beta domain EB778_RS14455 PF00128 Alpha amylase, catalytic domain EB778_RS14460 PF13987 YedD-like protein EB778_RS14465 PF04143 Sulphur transport EB778_RS14470 PF01206 Sulfurtransferase TusA EB778_RS14480 PF02049 Flagellar hook-basal body complex protein FliE EB778_RS14485 PF01514 Secretory protein of YscJ/FliF family EB778_RS14485 PF08345 Flagellar M-ring protein C-terminal EB778_RS14490 PF14841 FliG middle domain EB778_RS14490 PF01706 FliG C-terminal domain EB778_RS14490 PF14842 FliG N-terminal domain EB778_RS14495 PF02108 Flagellar assembly protein FliH EB778_RS14500 PF18269 T3SS EscN ATPase C-terminal domain EB778_RS14500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS14505 PF02050 Flagellar FliJ protein EB778_RS14510 PF02120 Flagellar hook-length control protein FliK EB778_RS14515 PF03748 Flagellar basal body-associated protein FliL EB778_RS14520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EB778_RS14520 PF02154 Flagellar motor switch protein FliM EB778_RS14525 PF16973 Flagellar motor switch protein FliN N-terminal EB778_RS14525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EB778_RS14530 PF04347 Flagellar biosynthesis protein, FliO EB778_RS14535 PF00813 FliP family EB778_RS14540 PF01313 Bacterial export proteins, family 3 EB778_RS14545 PF01311 Bacterial export proteins, family 1 EB778_RS14550 PF00196 Bacterial regulatory proteins, luxR family EB778_RS14555 PF10781 Dextransucrase DSRB EB778_RS14560 PF10733 Protein of unknown function (DUF2525) EB778_RS14570 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS14570 PF17151 Periplasmic sensor domain EB778_RS14575 PF09926 Uncharacterized small protein (DUF2158) EB778_RS14580 PF05661 Protein of unknown function (DUF808) EB778_RS14585 PF00892 EamA-like transporter family EB778_RS14590 PF03852 DNA mismatch endonuclease Vsr EB778_RS14595 PF00145 C-5 cytosine-specific DNA methylase EB778_RS14595 PF18284 DNA methylase N-terminal domain EB778_RS14600 PF01966 HD domain EB778_RS14610 PF00267 Gram-negative porin EB778_RS14620 PF00313 'Cold-shock' DNA-binding domain EB778_RS14660 PF02562 PhoH-like protein EB778_RS14665 PF00474 Sodium:solute symporter family EB778_RS14670 PF14850 DNA-binding domain of Proline dehydrogenase EB778_RS14670 PF01619 Proline dehydrogenase EB778_RS14670 PF00171 Aldehyde dehydrogenase family EB778_RS14670 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EB778_RS14680 PF08362 YcdC-like protein, C-terminal region EB778_RS14680 PF00440 Bacterial regulatory proteins, tetR family EB778_RS14685 PF10685 Stress-induced bacterial acidophilic repeat motif EB778_RS14690 PF03358 NADPH-dependent FMN reductase EB778_RS14695 PF13993 YccJ-like protein EB778_RS14700 PF00328 Histidine phosphatase superfamily (branch 2) EB778_RS14705 PF00578 AhpC/TSA family EB778_RS14710 PF13462 Thioredoxin EB778_RS14710 PF06965 Na+/H+ antiporter 1 EB778_RS14715 PF11412 Disulphide bond corrector protein DsbC EB778_RS14715 PF02683 Cytochrome C biogenesis protein transmembrane region EB778_RS14715 PF13098 Thioredoxin-like domain EB778_RS14725 PF00226 DnaJ domain EB778_RS14725 PF01556 DnaJ C terminal domain EB778_RS14740 PF12706 Beta-lactamase superfamily domain EB778_RS14750 PF07690 Major Facilitator Superfamily EB778_RS14755 PF03328 HpcH/HpaI aldolase/citrate lyase family EB778_RS14760 PF01557 Fumarylacetoacetate (FAA) hydrolase family EB778_RS14765 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase EB778_RS14770 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EB778_RS14775 PF00171 Aldehyde dehydrogenase family EB778_RS14780 PF01557 Fumarylacetoacetate (FAA) hydrolase family EB778_RS14785 PF01047 MarR family EB778_RS14790 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal EB778_RS14790 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal EB778_RS14795 PF01613 Flavin reductase like domain EB778_RS14800 PF00576 HIUase/Transthyretin family EB778_RS14805 PF00486 Transcriptional regulatory protein, C terminal EB778_RS14805 PF00072 Response regulator receiver domain EB778_RS14810 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS14815 PF03577 Peptidase family C69 EB778_RS14825 PF13132 Domain of unknown function (DUF3950) EB778_RS14830 PF05925 Enterobacterial virulence protein IpgD EB778_RS14835 PF07824 Type III secretion chaperone domain EB778_RS14840 PF00805 Pentapeptide repeats (8 copies) EB778_RS14855 PF01027 Inhibitor of apoptosis-promoting Bax1 EB778_RS14860 PF04358 DsrC like protein EB778_RS14865 PF00708 Acylphosphatase EB778_RS14870 PF12833 Helix-turn-helix domain EB778_RS14875 PF01161 Phosphatidylethanolamine-binding protein EB778_RS14880 PF10672 S-adenosylmethionine-dependent methyltransferase EB778_RS14880 PF17785 PUA-like domain EB778_RS14885 PF08755 Hemimethylated DNA-binding protein YccV like EB778_RS14890 PF13380 CoA binding domain EB778_RS14895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EB778_RS14900 PF02142 MGS-like domain EB778_RS14905 PF00580 UvrD/REP helicase N-terminal domain EB778_RS14905 PF13361 UvrD-like helicase C-terminal domain EB778_RS14905 PF12462 DNA helicase IV / RNA helicase N terminal EB778_RS14910 PF03733 Inner membrane component domain EB778_RS14915 PF12805 FUSC-like inner membrane protein yccS EB778_RS14920 PF04994 TfoX C-terminal domain EB778_RS14920 PF04993 TfoX N-terminal domain EB778_RS14925 PF03846 Cell division inhibitor SulA EB778_RS14930 PF01389 OmpA-like transmembrane domain EB778_RS14930 PF00691 OmpA family EB778_RS14935 PF06303 MatP N-terminal domain EB778_RS14935 PF17414 MatP C-terminal ribbon-helix-helix domain EB778_RS14940 PF13654 AAA domain EB778_RS14940 PF05362 Lon protease (S16) C-terminal proteolytic domain EB778_RS14945 PF07977 FabA-like domain EB778_RS14950 PF04957 Ribosome modulation factor EB778_RS14955 PF03886 ABC-type transport auxiliary lipoprotein component EB778_RS14960 PF02470 MlaD protein EB778_RS14965 PF04403 Paraquat-inducible protein A EB778_RS14970 PF00005 ABC transporter EB778_RS14970 PF16326 ABC transporter C-terminal domain EB778_RS14970 PF12848 ABC transporter EB778_RS14975 PF10672 S-adenosylmethionine-dependent methyltransferase EB778_RS14975 PF02926 THUMP domain EB778_RS14975 PF01170 Putative RNA methylase family UPF0020 EB778_RS14980 PF03476 MOSC N-terminal beta barrel domain EB778_RS14980 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS14980 PF03473 MOSC domain EB778_RS14985 PF07126 Cell-division protein ZapC EB778_RS14990 PF01180 Dihydroorotate dehydrogenase EB778_RS14995 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EB778_RS14995 PF01433 Peptidase family M1 domain EB778_RS14995 PF11940 Domain of unknown function (DUF3458) Ig-like fold EB778_RS15000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EB778_RS15000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EB778_RS15005 PF01235 Sodium:alanine symporter family EB778_RS15010 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS15020 PF01037 Lrp/AsnC ligand binding domain EB778_RS15020 PF13404 AsnC-type helix-turn-helix domain EB778_RS15025 PF01336 OB-fold nucleic acid binding domain EB778_RS15025 PF00152 tRNA synthetases class II (D, K and N) EB778_RS15030 PF00267 Gram-negative porin EB778_RS15035 PF00155 Aminotransferase class I and II EB778_RS15040 PF00753 Metallo-beta-lactamase superfamily EB778_RS15045 PF05951 Bacterial protein of unknown function (DUF882) EB778_RS15050 PF03734 L,D-transpeptidase catalytic domain EB778_RS15050 PF01471 Putative peptidoglycan binding domain EB778_RS15055 PF04310 MukB N-terminal EB778_RS15055 PF16330 MukB hinge domain EB778_RS15060 PF04288 MukE-like family EB778_RS15065 PF03882 MukF winged-helix domain EB778_RS15065 PF17192 MukF middle domain EB778_RS15065 PF17193 MukF C-terminal domain EB778_RS15070 PF13847 Methyltransferase domain EB778_RS15075 PF02698 DUF218 domain EB778_RS15080 PF01636 Phosphotransferase enzyme family EB778_RS15085 PF02348 Cytidylyltransferase EB778_RS15090 PF03966 Trm112p-like protein EB778_RS15095 PF06224 Winged helix DNA-binding domain EB778_RS15100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EB778_RS15105 PF00005 ABC transporter EB778_RS15105 PF00664 ABC transporter transmembrane region EB778_RS15110 PF00753 Metallo-beta-lactamase superfamily EB778_RS15110 PF03772 Competence protein EB778_RS15115 PF00216 Bacterial DNA-binding protein EB778_RS15120 PF00575 S1 RNA binding domain EB778_RS15125 PF02224 Cytidylate kinase EB778_RS15130 PF01435 Peptidase family M48 EB778_RS15135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EB778_RS15140 PF00266 Aminotransferase class-V EB778_RS15145 PF04239 Protein of unknown function (DUF421) EB778_RS15150 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EB778_RS15150 PF18381 YcaO cyclodehydratase C-terminal domain EB778_RS15155 PF01226 Formate/nitrite transporter EB778_RS15160 PF01228 Glycine radical EB778_RS15160 PF02901 Pyruvate formate lyase-like EB778_RS15165 PF11047 Salmonella outer protein D EB778_RS15175 PF04055 Radical SAM superfamily EB778_RS15180 PF13520 Amino acid permease EB778_RS15185 PF07690 Major Facilitator Superfamily EB778_RS15190 PF04976 DMSO reductase anchor subunit (DmsC) EB778_RS15195 PF13247 4Fe-4S dicluster domain EB778_RS15195 PF12800 4Fe-4S binding domain EB778_RS15200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS15200 PF00384 Molybdopterin oxidoreductase EB778_RS15200 PF01568 Molydopterin dinucleotide binding domain EB778_RS15205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EB778_RS15205 PF02403 Seryl-tRNA synthetase N-terminal domain EB778_RS15210 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS15210 PF16193 AAA C-terminal domain EB778_RS15210 PF12002 MgsA AAA+ ATPase C terminal EB778_RS15215 PF03548 Outer membrane lipoprotein carrier protein LolA EB778_RS15220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EB778_RS15220 PF01580 FtsK/SpoIIIE family EB778_RS15220 PF17854 FtsK alpha domain EB778_RS15220 PF09397 Ftsk gamma domain EB778_RS15225 PF01037 Lrp/AsnC ligand binding domain EB778_RS15230 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS15235 PF00005 ABC transporter EB778_RS15235 PF00664 ABC transporter transmembrane region EB778_RS15240 PF00664 ABC transporter transmembrane region EB778_RS15240 PF00005 ABC transporter EB778_RS15245 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EB778_RS15255 PF01176 Translation initiation factor 1A / IF-1 EB778_RS15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS15260 PF03466 LysR substrate binding domain EB778_RS15265 PF05726 Pirin C-terminal cupin domain EB778_RS15265 PF02678 Pirin EB778_RS15270 PF00857 Isochorismatase family EB778_RS15285 PF10431 C-terminal, D2-small domain, of ClpB protein EB778_RS15285 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS15285 PF07724 AAA domain (Cdc48 subfamily) EB778_RS15285 PF17871 AAA lid domain EB778_RS15285 PF02861 Clp amino terminal domain, pathogenicity island component EB778_RS15290 PF02617 ATP-dependent Clp protease adaptor protein ClpS EB778_RS15295 PF00313 'Cold-shock' DNA-binding domain EB778_RS15300 PF12704 MacB-like periplasmic core domain EB778_RS15300 PF02687 FtsX-like permease family EB778_RS15300 PF00005 ABC transporter EB778_RS15305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS15310 PF04393 Protein of unknown function (DUF535) EB778_RS15315 PF11398 Protein of unknown function (DUF2813) EB778_RS15320 PF03956 Lysine exporter LysO EB778_RS15325 PF03063 Prismane/CO dehydrogenase family EB778_RS15330 PF00970 Oxidoreductase FAD-binding domain EB778_RS15330 PF00175 Oxidoreductase NAD-binding domain EB778_RS15330 PF00111 2Fe-2S iron-sulfur cluster binding domain EB778_RS15335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS15335 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS15335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS15340 PF01212 Beta-eliminating lyase EB778_RS15345 PF13460 NAD(P)H-binding EB778_RS15345 PF11066 Protein of unknown function (DUF2867) EB778_RS15350 PF01370 NAD dependent epimerase/dehydratase family EB778_RS15355 PF01510 N-acetylmuramoyl-L-alanine amidase EB778_RS15360 PF01906 Putative heavy-metal-binding EB778_RS15365 PF12883 Protein of unknown function (DUF3828) EB778_RS15370 PF00005 ABC transporter EB778_RS15375 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15390 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS15405 PF03611 PTS system sugar-specific permease component EB778_RS15410 PF05958 tRNA (Uracil-5-)-methyltransferase EB778_RS15415 PF10767 Protein of unknown function (DUF2593) EB778_RS15420 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15425 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15430 PF00005 ABC transporter EB778_RS15430 PF08402 TOBE domain EB778_RS15435 PF13416 Bacterial extracellular solute-binding protein EB778_RS15440 PF10722 Putative bacterial sensory transduction regulator EB778_RS15445 PF08443 RimK-like ATP-grasp domain EB778_RS15445 PF18030 RimK PreATP-grasp domain EB778_RS15450 PF00881 Nitroreductase family EB778_RS15455 PF07214 Protein of unknown function (DUF1418) EB778_RS15460 PF00462 Glutaredoxin EB778_RS15465 PF11045 Putative inner membrane protein of Enterobacteriaceae EB778_RS15470 PF06826 Predicted Permease Membrane Region EB778_RS15470 PF02080 TrkA-C domain EB778_RS15480 PF00440 Bacterial regulatory proteins, tetR family EB778_RS15485 PF07690 Major Facilitator Superfamily EB778_RS15495 PF07690 Major Facilitator Superfamily EB778_RS15500 PF01569 PAP2 superfamily EB778_RS15505 PF08220 DeoR-like helix-turn-helix domain EB778_RS15505 PF00455 DeoR C terminal sensor domain EB778_RS15510 PF00768 D-alanyl-D-alanine carboxypeptidase EB778_RS15510 PF07943 Penicillin-binding protein 5, C-terminal domain EB778_RS15515 PF00043 Glutathione S-transferase, C-terminal domain EB778_RS15515 PF13417 Glutathione S-transferase, N-terminal domain EB778_RS15520 PF07995 Glucose / Sorbosone dehydrogenase EB778_RS15525 PF10799 Biofilm formation protein (YliH/bssR) EB778_RS15530 PF18693 TRAM domain EB778_RS15530 PF00919 Uncharacterized protein family UPF0004 EB778_RS15530 PF04055 Radical SAM superfamily EB778_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15535 PF12911 N-terminal TM domain of oligopeptide transport permease C EB778_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS15550 PF00005 ABC transporter EB778_RS15550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EB778_RS15555 PF01112 Asparaginase EB778_RS15560 PF00994 Probable molybdopterin binding domain EB778_RS15560 PF03454 MoeA C-terminal region (domain IV) EB778_RS15560 PF03453 MoeA N-terminal region (domain I and II) EB778_RS15565 PF00899 ThiF family EB778_RS15570 PF04055 Radical SAM superfamily EB778_RS15575 PF01228 Glycine radical EB778_RS15575 PF02901 Pyruvate formate lyase-like EB778_RS15585 PF07350 Protein of unknown function (DUF1479) EB778_RS15600 PF12848 ABC transporter EB778_RS15600 PF00005 ABC transporter EB778_RS15605 PF17969 L,D-transpeptidase C-terminal domain EB778_RS15605 PF03734 L,D-transpeptidase catalytic domain EB778_RS15610 PF03600 Citrate transporter EB778_RS15615 PF01325 Iron dependent repressor, N-terminal DNA binding domain EB778_RS15615 PF02742 Iron dependent repressor, metal binding and dimerisation domain EB778_RS15625 PF00884 Sulfatase EB778_RS15630 PF13505 Outer membrane protein beta-barrel domain EB778_RS15635 PF00892 EamA-like transporter family EB778_RS15640 PF00210 Ferritin-like domain EB778_RS15645 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15655 PF00005 ABC transporter EB778_RS15660 PF00924 Mechanosensitive ion channel EB778_RS15665 PF05971 RNA methyltransferase EB778_RS15670 PF01258 Prokaryotic dksA/traR C4-type zinc finger EB778_RS15675 PF07338 Protein of unknown function (DUF1471) EB778_RS15680 PF02885 Glycosyl transferase family, helical bundle domain EB778_RS15685 PF06733 DEAD_2 EB778_RS15685 PF13307 Helicase C-terminal domain EB778_RS15690 PF00270 DEAD/DEAH box helicase EB778_RS15690 PF00271 Helicase conserved C-terminal domain EB778_RS15695 PF00171 Aldehyde dehydrogenase family EB778_RS15695 PF00465 Iron-containing alcohol dehydrogenase EB778_RS15700 PF02780 Transketolase, C-terminal domain EB778_RS15700 PF02779 Transketolase, pyrimidine binding domain EB778_RS15705 PF00456 Transketolase, thiamine diphosphate binding domain EB778_RS15715 PF07690 Major Facilitator Superfamily EB778_RS15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS15720 PF03466 LysR substrate binding domain EB778_RS15725 PF09209 Tetracyclin repressor-like, C-terminal domain EB778_RS15725 PF00440 Bacterial regulatory proteins, tetR family EB778_RS15730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS15735 PF00005 ABC transporter EB778_RS15750 PF11076 Putative inner membrane protein YbhQ EB778_RS15755 PF03372 Endonuclease/Exonuclease/phosphatase family EB778_RS15760 PF13091 PLD-like domain EB778_RS15765 PF03706 Lysylphosphatidylglycerol synthase TM region EB778_RS15785 PF01027 Inhibitor of apoptosis-promoting Bax1 EB778_RS15790 PF02391 MoaE protein EB778_RS15795 PF02597 ThiS family EB778_RS15800 PF01967 MoaC family EB778_RS15805 PF00994 Probable molybdopterin binding domain EB778_RS15810 PF04055 Radical SAM superfamily EB778_RS15810 PF06463 Molybdenum Cofactor Synthesis C EB778_RS15815 PF01933 Uncharacterised protein family UPF0052 EB778_RS15820 PF14496 C-terminal novel E3 ligase, LRR-interacting EB778_RS15820 PF12468 Type III secretion system leucine rich repeat protein EB778_RS15825 PF12344 Ultra-violet resistance protein B EB778_RS15825 PF04851 Type III restriction enzyme, res subunit EB778_RS15825 PF02151 UvrB/uvrC motif EB778_RS15825 PF17757 UvrB interaction domain EB778_RS15825 PF00271 Helicase conserved C-terminal domain EB778_RS15840 PF08241 Methyltransferase domain EB778_RS15845 PF00155 Aminotransferase class I and II EB778_RS15850 PF06968 Biotin and Thiamin Synthesis associated domain EB778_RS15850 PF04055 Radical SAM superfamily EB778_RS15855 PF00202 Aminotransferase class-III EB778_RS15860 PF01161 Phosphatidylethanolamine-binding protein EB778_RS15865 PF00221 Aromatic amino acid lyase EB778_RS15870 PF01175 Urocanase Rossmann-like domain EB778_RS15870 PF17392 Urocanase C-terminal domain EB778_RS15870 PF17391 Urocanase N-terminal domain EB778_RS15875 PF07702 UTRA domain EB778_RS15875 PF00392 Bacterial regulatory proteins, gntR family EB778_RS15880 PF00491 Arginase family EB778_RS15885 PF01979 Amidohydrolase family EB778_RS15890 PF01095 Pectinesterase EB778_RS15895 PF10282 Lactonase, 7-bladed beta-propeller EB778_RS15905 PF00005 ABC transporter EB778_RS15905 PF03459 TOBE domain EB778_RS15910 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS15920 PF10766 Multidrug efflux pump-associated protein AcrZ EB778_RS15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS15925 PF03459 TOBE domain EB778_RS15930 PF00005 ABC transporter EB778_RS15940 PF16363 GDP-mannose 4,6 dehydratase EB778_RS15945 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EB778_RS15945 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EB778_RS15950 PF08544 GHMP kinases C terminal EB778_RS15950 PF00288 GHMP kinases N terminal domain EB778_RS15950 PF10509 Galactokinase galactose-binding signature EB778_RS15955 PF01263 Aldose 1-epimerase EB778_RS15960 PF00300 Histidine phosphatase superfamily (branch 1) EB778_RS15965 PF00005 ABC transporter EB778_RS15970 PF01032 FecCD transport family EB778_RS15975 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EB778_RS15980 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EB778_RS15985 PF02436 Conserved carboxylase domain EB778_RS15985 PF00364 Biotin-requiring enzyme EB778_RS15985 PF00682 HMGL-like EB778_RS15990 PF04277 Oxaloacetate decarboxylase, gamma chain EB778_RS15995 PF02080 TrkA-C domain EB778_RS15995 PF03600 Citrate transporter EB778_RS16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS16000 PF03466 LysR substrate binding domain EB778_RS16005 PF03466 LysR substrate binding domain EB778_RS16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS16010 PF05681 Fumarate hydratase (Fumerase) EB778_RS16015 PF05681 Fumarate hydratase (Fumerase) EB778_RS16015 PF05683 Fumarase C-terminus EB778_RS16020 PF00793 DAHP synthetase I family EB778_RS16025 PF13985 YbgS-like protein EB778_RS16030 PF01545 Cation efflux family EB778_RS16035 PF04973 Nicotinamide mononucleotide transporter EB778_RS16040 PF02445 Quinolinate synthetase A protein EB778_RS16075 PF13174 Tetratricopeptide repeat EB778_RS16075 PF16331 TolA binding protein trimerisation EB778_RS16080 PF00691 OmpA family EB778_RS16085 PF07676 WD40-like Beta Propeller Repeat EB778_RS16085 PF04052 TolB amino-terminal domain EB778_RS16090 PF06519 TolA C-terminal EB778_RS16095 PF02472 Biopolymer transport protein ExbD/TolR EB778_RS16100 PF01618 MotA/TolQ/ExbB proton channel family EB778_RS16105 PF03061 Thioesterase superfamily EB778_RS16110 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) EB778_RS16115 PF08173 Membrane bound YbgT-like protein EB778_RS16120 PF02322 Cytochrome bd terminal oxidase subunit II EB778_RS16125 PF01654 Cytochrome bd terminal oxidase subunit I EB778_RS16130 PF02629 CoA binding domain EB778_RS16130 PF00549 CoA-ligase EB778_RS16135 PF00549 CoA-ligase EB778_RS16135 PF08442 ATP-grasp domain EB778_RS16140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EB778_RS16140 PF00364 Biotin-requiring enzyme EB778_RS16140 PF02817 e3 binding domain EB778_RS16145 PF02779 Transketolase, pyrimidine binding domain EB778_RS16145 PF16078 2-oxoglutarate dehydrogenase N-terminus EB778_RS16145 PF16870 2-oxoglutarate dehydrogenase C-terminal EB778_RS16145 PF00676 Dehydrogenase E1 component EB778_RS16150 PF13085 2Fe-2S iron-sulfur cluster binding domain EB778_RS16155 PF02910 Fumarate reductase flavoprotein C-term EB778_RS16155 PF00890 FAD binding domain EB778_RS16160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EB778_RS16165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EB778_RS16170 PF00285 Citrate synthase, C-terminal domain EB778_RS16175 PF05145 Transition state regulatory protein AbrB EB778_RS16180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EB778_RS16180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EB778_RS16180 PF06827 Zinc finger found in FPG and IleRS EB778_RS16200 PF17994 Galactofuranosyltransferase 2 N-terminal EB778_RS16205 PF00005 ABC transporter EB778_RS16210 PF01061 ABC-2 type transporter EB778_RS16225 PF03275 UDP-galactopyranose mutase EB778_RS16240 PF00589 Phage integrase family EB778_RS16250 PF03746 LamB/YcsF family EB778_RS16255 PF02626 Carboxyltransferase domain, subdomain A and B EB778_RS16260 PF02682 Carboxyltransferase domain, subdomain C and D EB778_RS16265 PF01784 NIF3 (NGG1p interacting factor 3) EB778_RS16270 PF00854 POT family EB778_RS16275 PF00875 DNA photolyase EB778_RS16275 PF03441 FAD binding domain of DNA photolyase EB778_RS16280 PF10725 Protein of unknown function (DUF2517) EB778_RS16285 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) EB778_RS16290 PF03814 Potassium-transporting ATPase A subunit EB778_RS16300 PF02669 K+-transporting ATPase, c chain EB778_RS16305 PF13492 GAF domain EB778_RS16305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS16305 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS16305 PF02702 Osmosensitive K+ channel His kinase sensor domain EB778_RS16305 PF13493 Domain of unknown function (DUF4118) EB778_RS16310 PF00486 Transcriptional regulatory protein, C terminal EB778_RS16310 PF00072 Response regulator receiver domain EB778_RS16315 PF10940 Protein of unknown function (DUF2618) EB778_RS16320 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EB778_RS16320 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EB778_RS16320 PF01276 Orn/Lys/Arg decarboxylase, major domain EB778_RS16325 PF13520 Amino acid permease EB778_RS16335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EB778_RS16335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EB778_RS16335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EB778_RS16335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EB778_RS16340 PF17206 SeqA protein N-terminal domain EB778_RS16340 PF03925 SeqA protein C-terminal domain EB778_RS16345 PF12697 Alpha/beta hydrolase family EB778_RS16350 PF01402 Ribbon-helix-helix protein, copG family EB778_RS16355 PF00258 Flavodoxin EB778_RS16360 PF01475 Ferric uptake regulator family EB778_RS16365 PF03466 LysR substrate binding domain EB778_RS16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS16370 PF00890 FAD binding domain EB778_RS16370 PF14537 Cytochrome c3 EB778_RS16380 PF07690 Major Facilitator Superfamily EB778_RS16385 PF13982 YbfN-like lipoprotein EB778_RS16390 PF03573 outer membrane porin, OprD family EB778_RS16395 PF00749 tRNA synthetases class I (E and Q), catalytic domain EB778_RS16395 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EB778_RS16400 PF02378 Phosphotransferase system, EIIC EB778_RS16400 PF00367 phosphotransferase system, EIIB EB778_RS16400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EB778_RS16405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EB778_RS16410 PF01979 Amidohydrolase family EB778_RS16415 PF01047 MarR family EB778_RS16415 PF00480 ROK family EB778_RS16420 PF13344 Haloacid dehalogenase-like hydrolase EB778_RS16425 PF00733 Asparagine synthase EB778_RS16425 PF13537 Glutamine amidotransferase domain EB778_RS16465 PF01494 FAD binding domain EB778_RS16470 PF04055 Radical SAM superfamily EB778_RS16470 PF01938 TRAM domain EB778_RS16470 PF00919 Uncharacterized protein family UPF0004 EB778_RS16475 PF02562 PhoH-like protein EB778_RS16480 PF02130 Uncharacterized protein family UPF0054 EB778_RS16485 PF00571 CBS domain EB778_RS16485 PF03471 Transporter associated domain EB778_RS16490 PF00795 Carbon-nitrogen hydrolase EB778_RS16495 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS16500 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS16505 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS16510 PF00005 ABC transporter EB778_RS16515 PF01156 Inosine-uridine preferring nucleoside hydrolase EB778_RS16525 PF00012 Hsp70 protein EB778_RS16535 PF06889 Protein of unknown function (DUF1266) EB778_RS16545 PF06889 Protein of unknown function (DUF1266) EB778_RS16555 PF07295 Zinc-ribbon containing domain EB778_RS16560 PF00989 PAS fold EB778_RS16560 PF02954 Bacterial regulatory protein, Fis family EB778_RS16560 PF00158 Sigma-54 interaction domain EB778_RS16565 PF03812 2-keto-3-deoxygluconate permease EB778_RS16570 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EB778_RS16580 PF00133 tRNA synthetases class I (I, L, M and V) EB778_RS16580 PF13603 Leucyl-tRNA synthetase, Domain 2 EB778_RS16580 PF08264 Anticodon-binding domain of tRNA EB778_RS16585 PF04390 Lipopolysaccharide-assembly EB778_RS16590 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EB778_RS16590 PF06144 DNA polymerase III, delta subunit EB778_RS16595 PF01467 Cytidylyltransferase-like EB778_RS16600 PF00155 Aminotransferase class I and II EB778_RS16605 PF00300 Histidine phosphatase superfamily (branch 1) EB778_RS16615 PF02590 Predicted SPOUT methyltransferase EB778_RS16620 PF00905 Penicillin binding protein transpeptidase domain EB778_RS16620 PF03717 Penicillin-binding Protein dimerisation domain EB778_RS16625 PF01098 Cell cycle protein EB778_RS16630 PF05036 Sporulation related domain EB778_RS16630 PF03330 Lytic transglycolase EB778_RS16635 PF07943 Penicillin-binding protein 5, C-terminal domain EB778_RS16635 PF00768 D-alanyl-D-alanine carboxypeptidase EB778_RS16640 PF04359 Protein of unknown function (DUF493) EB778_RS16645 PF03099 Biotin/lipoate A/B protein ligase family EB778_RS16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS16650 PF03466 LysR substrate binding domain EB778_RS16655 PF04055 Radical SAM superfamily EB778_RS16655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EB778_RS16660 PF02416 mttA/Hcf106 family EB778_RS16665 PF00795 Carbon-nitrogen hydrolase EB778_RS16670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EB778_RS16675 PF00313 'Cold-shock' DNA-binding domain EB778_RS16680 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP EB778_RS16685 PF03606 C4-dicarboxylate anaerobic carrier EB778_RS16690 PF12431 Transcriptional regulator EB778_RS16690 PF00072 Response regulator receiver domain EB778_RS16695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EB778_RS16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS16695 PF00989 PAS fold EB778_RS16695 PF17203 Single cache domain 3 EB778_RS16700 PF08218 Citrate lyase ligase C-terminal domain EB778_RS16705 PF06857 Malonate decarboxylase delta subunit (MdcD) EB778_RS16710 PF03328 HpcH/HpaI aldolase/citrate lyase family EB778_RS16715 PF04223 Citrate lyase, alpha subunit (CitF) EB778_RS16720 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EB778_RS16725 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EB778_RS16730 PF00939 Sodium:sulfate symporter transmembrane region EB778_RS16735 PF00445 Ribonuclease T2 family EB778_RS16740 PF14760 Rnk N-terminus EB778_RS16740 PF01272 Transcription elongation factor, GreA/GreB, C-term EB778_RS16745 PF13823 Alcohol dehydrogenase GroES-associated EB778_RS16745 PF00107 Zinc-binding dehydrogenase EB778_RS16745 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS16750 PF00582 Universal stress protein family EB778_RS16760 PF13247 4Fe-4S dicluster domain EB778_RS16765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS16765 PF00384 Molybdopterin oxidoreductase EB778_RS16765 PF01568 Molydopterin dinucleotide binding domain EB778_RS16775 PF13192 Thioredoxin domain EB778_RS16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS16780 PF00578 AhpC/TSA family EB778_RS16780 PF10417 C-terminal domain of 1-Cys peroxiredoxin EB778_RS16785 PF13098 Thioredoxin-like domain EB778_RS16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS16790 PF03466 LysR substrate binding domain EB778_RS16795 PF11922 Domain of unknown function (DUF3440) EB778_RS16795 PF01507 Phosphoadenosine phosphosulfate reductase family EB778_RS16800 PF02195 ParB-like nuclease domain EB778_RS16805 PF00155 Aminotransferase class I and II EB778_RS16810 PF00465 Iron-containing alcohol dehydrogenase EB778_RS16815 PF04328 Selenoprotein, putative EB778_RS16820 PF02554 Carbon starvation protein CstA EB778_RS16820 PF13722 5TM C-terminal transporter carbon starvation CstA EB778_RS16825 PF03061 Thioesterase superfamily EB778_RS16835 PF00550 Phosphopantetheine attachment site EB778_RS16835 PF00857 Isochorismatase family EB778_RS16840 PF13193 AMP-binding enzyme C-terminal domain EB778_RS16840 PF00501 AMP-binding enzyme EB778_RS16845 PF00425 chorismate binding enzyme EB778_RS16850 PF01497 Periplasmic binding protein EB778_RS16855 PF05977 Transmembrane secretion effector EB778_RS16860 PF01032 FecCD transport family EB778_RS16865 PF01032 FecCD transport family EB778_RS16870 PF00005 ABC transporter EB778_RS16875 PF02706 Chain length determinant protein EB778_RS16880 PF00975 Thioesterase domain EB778_RS16880 PF13193 AMP-binding enzyme C-terminal domain EB778_RS16880 PF00501 AMP-binding enzyme EB778_RS16880 PF00550 Phosphopantetheine attachment site EB778_RS16880 PF00668 Condensation domain EB778_RS16885 PF03621 MbtH-like protein EB778_RS16890 PF00756 Putative esterase EB778_RS16890 PF11806 Domain of unknown function (DUF3327) EB778_RS16895 PF07715 TonB-dependent Receptor Plug Domain EB778_RS16895 PF00593 TonB dependent receptor EB778_RS16900 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EB778_RS16900 PF01648 4'-phosphopantetheinyl transferase superfamily EB778_RS16905 PF04107 Glutamate-cysteine ligase family 2(GCS2) EB778_RS16910 PF06643 Protein of unknown function (DUF1158) EB778_RS16915 PF12833 Helix-turn-helix domain EB778_RS16920 PF16295 Tetracyclin repressor-like, C-terminal domain EB778_RS16920 PF00440 Bacterial regulatory proteins, tetR family EB778_RS16925 PF04237 YjbR EB778_RS16930 PF00881 Nitroreductase family EB778_RS16940 PF03830 PTS system sorbose subfamily IIB component EB778_RS16950 PF03613 PTS system mannose/fructose/sorbose family IID component EB778_RS16960 PF01380 SIS domain EB778_RS16965 PF00158 Sigma-54 interaction domain EB778_RS16965 PF03610 PTS system fructose IIA component EB778_RS16965 PF00874 PRD domain EB778_RS16970 PF03797 Autotransporter beta-domain EB778_RS16970 PF00657 GDSL-like Lipase/Acylhydrolase EB778_RS16975 PF00924 Mechanosensitive ion channel EB778_RS16980 PF00324 Amino acid permease EB778_RS16990 PF04224 Protein of unknown function, DUF417 EB778_RS16995 PF07338 Protein of unknown function (DUF1471) EB778_RS17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS17000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EB778_RS17005 PF12833 Helix-turn-helix domain EB778_RS17005 PF12852 Cupin EB778_RS17025 PF04138 GtrA-like protein EB778_RS17030 PF00535 Glycosyl transferase family 2 EB778_RS17060 PF00196 Bacterial regulatory proteins, luxR family EB778_RS17075 PF00072 Response regulator receiver domain EB778_RS17075 PF00196 Bacterial regulatory proteins, luxR family EB778_RS17080 PF00419 Fimbrial protein EB778_RS17085 PF00419 Fimbrial protein EB778_RS17090 PF00577 Outer membrane usher protein EB778_RS17090 PF13954 PapC N-terminal domain EB778_RS17090 PF13953 PapC C-terminal domain EB778_RS17095 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS17095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS17105 PF00419 Fimbrial protein EB778_RS17115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EB778_RS17115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EB778_RS17125 PF04307 LexA-binding, inner membrane-associated putative hydrolase EB778_RS17140 PF01406 tRNA synthetases class I (C) catalytic domain EB778_RS17140 PF09190 DALR domain EB778_RS17145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EB778_RS17150 PF12850 Calcineurin-like phosphoesterase superfamily domain EB778_RS17155 PF00731 AIR carboxylase EB778_RS17160 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EB778_RS17160 PF02222 ATP-grasp domain EB778_RS17165 PF00696 Amino acid kinase family EB778_RS17170 PF11392 Protein of unknown function (DUF2877) EB778_RS17175 PF06545 Protein of unknown function (DUF1116) EB778_RS17180 PF00549 CoA-ligase EB778_RS17180 PF02629 CoA binding domain EB778_RS17185 PF02615 Malate/L-lactate dehydrogenase EB778_RS17190 PF01546 Peptidase family M20/M25/M40 EB778_RS17195 PF05899 Protein of unknown function (DUF861) EB778_RS17195 PF07883 Cupin domain EB778_RS17200 PF02595 Glycerate kinase family EB778_RS17205 PF00860 Permease family EB778_RS17210 PF01979 Amidohydrolase family EB778_RS17215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EB778_RS17225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EB778_RS17225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EB778_RS17230 PF01261 Xylose isomerase-like TIM barrel EB778_RS17235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS17235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS17235 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS17240 PF09339 IclR helix-turn-helix domain EB778_RS17240 PF01614 Bacterial transcriptional regulator EB778_RS17245 PF04115 Ureidoglycolate lyase EB778_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS17250 PF03466 LysR substrate binding domain EB778_RS17260 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS17265 PF00005 ABC transporter EB778_RS17265 PF09383 NIL domain EB778_RS17270 PF03180 NLPA lipoprotein EB778_RS17285 PF00005 ABC transporter EB778_RS17290 PF13472 GDSL-like Lipase/Acylhydrolase family EB778_RS17295 PF00106 short chain dehydrogenase EB778_RS17300 PF00085 Thioredoxin EB778_RS17305 PF03649 Uncharacterised protein family (UPF0014) EB778_RS17310 PF00005 ABC transporter EB778_RS17315 PF16200 C-terminal region of band_7 EB778_RS17315 PF01145 SPFH domain / Band 7 family EB778_RS17320 PF01957 NfeD-like C-terminal, partner-binding EB778_RS17325 PF13411 MerR HTH family regulatory protein EB778_RS17330 PF00403 Heavy-metal-associated domain EB778_RS17340 PF01963 TraB family EB778_RS17345 PF04073 Aminoacyl-tRNA editing domain EB778_RS17350 PF02872 5'-nucleotidase, C-terminal domain EB778_RS17350 PF00149 Calcineurin-like phosphoesterase EB778_RS17355 PF07690 Major Facilitator Superfamily EB778_RS17360 PF00999 Sodium/hydrogen exchanger family EB778_RS17360 PF02254 TrkA-N domain EB778_RS17365 PF00294 pfkB family carbohydrate kinase EB778_RS17370 PF07859 alpha/beta hydrolase fold EB778_RS17375 PF00762 Ferrochelatase EB778_RS17380 PF05191 Adenylate kinase, active site lid EB778_RS17385 PF00183 Hsp90 protein EB778_RS17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS17390 PF13662 Toprim domain EB778_RS17390 PF02132 RecR protein EB778_RS17395 PF02575 YbaB/EbfC DNA-binding family EB778_RS17400 PF12169 DNA polymerase III subunits gamma and tau domain III EB778_RS17400 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EB778_RS17400 PF12170 DNA polymerase III tau subunit V interacting with alpha EB778_RS17405 PF00156 Phosphoribosyl transferase domain EB778_RS17410 PF04304 Protein of unknown function (DUF454) EB778_RS17415 PF07445 Primosomal replication protein priC EB778_RS17420 PF10689 Protein of unknown function (DUF2496) EB778_RS17425 PF04754 Putative transposase, YhgA-like EB778_RS17430 PF12795 Mechanosensitive ion channel porin domain EB778_RS17430 PF00924 Mechanosensitive ion channel EB778_RS17430 PF12794 Mechanosensitive ion channel inner membrane domain 1 EB778_RS17435 PF08361 MAATS-type transcriptional repressor, C-terminal region EB778_RS17435 PF00440 Bacterial regulatory proteins, tetR family EB778_RS17440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS17440 PF00529 HlyD membrane-fusion protein of T1SS EB778_RS17445 PF00873 AcrB/AcrD/AcrF family EB778_RS17450 PF10757 Biofilm formation regulator YbaJ EB778_RS17455 PF05321 Haemolysin expression modulating protein EB778_RS17460 PF14602 Hexapeptide repeat of succinyl-transferase EB778_RS17460 PF12464 Maltose acetyltransferase EB778_RS17465 PF10777 Inner membrane protein YlaC EB778_RS17470 PF00444 Ribosomal protein L36 EB778_RS17475 PF01197 Ribosomal protein L31 EB778_RS17480 PF00563 EAL domain EB778_RS17480 PF12792 CSS motif domain associated with EAL EB778_RS17490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EB778_RS17495 PF09619 Type III secretion system lipoprotein chaperone (YscW) EB778_RS17505 PF00909 Ammonium Transporter Family EB778_RS17510 PF00543 Nitrogen regulatory protein P-II EB778_RS17515 PF00664 ABC transporter transmembrane region EB778_RS17515 PF00005 ABC transporter EB778_RS17520 PF00664 ABC transporter transmembrane region EB778_RS17520 PF00005 ABC transporter EB778_RS17525 PF13404 AsnC-type helix-turn-helix domain EB778_RS17525 PF01037 Lrp/AsnC ligand binding domain EB778_RS17540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS17540 PF12793 Sugar transport-related sRNA regulator N-term EB778_RS17545 PF06508 Queuosine biosynthesis protein QueC EB778_RS17560 PF13145 PPIC-type PPIASE domain EB778_RS17565 PF00216 Bacterial DNA-binding protein EB778_RS17570 PF02190 ATP-dependent protease La (LON) substrate-binding domain EB778_RS17570 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS17570 PF05362 Lon protease (S16) C-terminal proteolytic domain EB778_RS17575 PF07724 AAA domain (Cdc48 subfamily) EB778_RS17575 PF10431 C-terminal, D2-small domain, of ClpB protein EB778_RS17575 PF06689 ClpX C4-type zinc finger EB778_RS17580 PF00574 Clp protease EB778_RS17585 PF05697 Bacterial trigger factor protein (TF) EB778_RS17585 PF05698 Bacterial trigger factor protein (TF) C-terminus EB778_RS17585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EB778_RS17595 PF01722 BolA-like protein EB778_RS17600 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EB778_RS17600 PF03923 Uncharacterized lipoprotein EB778_RS17605 PF07690 Major Facilitator Superfamily EB778_RS17610 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EB778_RS17610 PF06481 COX Aromatic Rich Motif EB778_RS17615 PF00115 Cytochrome C and Quinol oxidase polypeptide I EB778_RS17620 PF00510 Cytochrome c oxidase subunit III EB778_RS17625 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EB778_RS17630 PF01040 UbiA prenyltransferase family EB778_RS17650 PF07690 Major Facilitator Superfamily EB778_RS17655 PF04461 Protein of unknown function (DUF520) EB778_RS17660 PF02558 Ketopantoate reductase PanE/ApbA EB778_RS17660 PF08546 Ketopantoate reductase PanE/ApbA C terminal EB778_RS17665 PF01965 DJ-1/PfpI family EB778_RS17675 PF00266 Aminotransferase class-V EB778_RS17680 PF00392 Bacterial regulatory proteins, gntR family EB778_RS17680 PF07702 UTRA domain EB778_RS17685 PF01547 Bacterial extracellular solute-binding protein EB778_RS17690 PF08402 TOBE domain EB778_RS17690 PF00005 ABC transporter EB778_RS17695 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS17700 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS17705 PF02568 Thiamine biosynthesis protein (ThiI) EB778_RS17705 PF02926 THUMP domain EB778_RS17710 PF02609 Exonuclease VII small subunit EB778_RS17715 PF00348 Polyprenyl synthetase EB778_RS17720 PF02779 Transketolase, pyrimidine binding domain EB778_RS17720 PF02780 Transketolase, C-terminal domain EB778_RS17720 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EB778_RS17725 PF00248 Aldo/keto reductase family EB778_RS17730 PF04608 Phosphatidylglycerophosphatase A EB778_RS17735 PF00586 AIR synthase related protein, N-terminal domain EB778_RS17735 PF02769 AIR synthase related protein, C-terminal domain EB778_RS17740 PF01029 NusB family EB778_RS17745 PF00885 6,7-dimethyl-8-ribityllumazine synthase EB778_RS17750 PF01872 RibD C-terminal domain EB778_RS17750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EB778_RS17755 PF03477 ATP cone domain EB778_RS17760 PF11622 Protein of unknown function (DUF3251) EB778_RS17765 PF03502 Nucleoside-specific channel-forming protein, Tsx EB778_RS17780 PF01844 HNH endonuclease EB778_RS17785 PF02355 Protein export membrane protein EB778_RS17785 PF07549 SecD/SecF GG Motif EB778_RS17790 PF13721 SecD export protein N-terminal TM region EB778_RS17790 PF02355 Protein export membrane protein EB778_RS17790 PF07549 SecD/SecF GG Motif EB778_RS17795 PF02699 Preprotein translocase subunit EB778_RS17800 PF01702 Queuine tRNA-ribosyltransferase EB778_RS17805 PF02547 Queuosine biosynthesis protein EB778_RS17810 PF04336 Acyl carrier protein phosphodiesterase EB778_RS17815 PF10417 C-terminal domain of 1-Cys peroxiredoxin EB778_RS17815 PF00578 AhpC/TSA family EB778_RS17820 PF02903 Alpha amylase, N-terminal ig-like domain EB778_RS17820 PF00128 Alpha amylase, catalytic domain EB778_RS17825 PF00324 Amino acid permease EB778_RS17830 PF05525 Branched-chain amino acid transport protein EB778_RS17835 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS17835 PF11808 Phosphate regulon sensor protein PhoR EB778_RS17835 PF00989 PAS fold EB778_RS17840 PF00486 Transcriptional regulatory protein, C terminal EB778_RS17840 PF00072 Response regulator receiver domain EB778_RS17845 PF00149 Calcineurin-like phosphoesterase EB778_RS17845 PF12320 Type 5 capsule protein repressor C-terminal domain EB778_RS17850 PF13476 AAA domain EB778_RS17855 PF07690 Major Facilitator Superfamily EB778_RS17860 PF00480 ROK family EB778_RS17865 PF04381 Putative exonuclease, RdgC EB778_RS17870 PF06865 Pyrimidine/purine nucleoside phosphorylase EB778_RS17875 PF07302 AroM protein EB778_RS17880 PF16362 YaiA protein EB778_RS17885 PF01202 Shikimate kinase EB778_RS17890 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EB778_RS17895 PF14748 Pyrroline-5-carboxylate reductase dimerisation EB778_RS17895 PF03807 NADP oxidoreductase coenzyme F420-dependent EB778_RS17900 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS17900 PF05230 MASE2 domain EB778_RS17905 PF07769 psiF repeat EB778_RS17910 PF10796 Sigma-S stabilisation anti-adaptor protein EB778_RS17915 PF07690 Major Facilitator Superfamily EB778_RS17925 PF07478 D-ala D-ala ligase C-terminus EB778_RS17925 PF01820 D-ala D-ala ligase N-terminus EB778_RS17930 PF10953 Protein of unknown function (DUF2754) EB778_RS17935 PF10954 Protein of unknown function (DUF2755) EB778_RS17940 PF07759 Protein of unknown function (DUF1615) EB778_RS17945 PF05992 SbmA/BacA-like family EB778_RS17950 PF00144 Beta-lactamase EB778_RS17955 PF15977 Winged helix-turn-helix DNA binding EB778_RS17960 PF03797 Autotransporter beta-domain EB778_RS17965 PF00490 Delta-aminolevulinic acid dehydratase EB778_RS17970 PF13193 AMP-binding enzyme C-terminal domain EB778_RS17970 PF16177 Acetyl-coenzyme A synthetase N-terminus EB778_RS17970 PF00501 AMP-binding enzyme EB778_RS17975 PF03972 MmgE/PrpD family EB778_RS17980 PF00285 Citrate synthase, C-terminal domain EB778_RS17990 PF00158 Sigma-54 interaction domain EB778_RS17990 PF02954 Bacterial regulatory protein, Fis family EB778_RS17990 PF06506 Propionate catabolism activator EB778_RS17995 PF07338 Protein of unknown function (DUF1471) EB778_RS18000 PF01810 LysE type translocator EB778_RS18005 PF07715 TonB-dependent Receptor Plug Domain EB778_RS18005 PF00593 TonB dependent receptor EB778_RS18020 PF02322 Cytochrome bd terminal oxidase subunit II EB778_RS18025 PF01654 Cytochrome bd terminal oxidase subunit I EB778_RS18035 PF04851 Type III restriction enzyme, res subunit EB778_RS18035 PF08774 VRR-NUC domain EB778_RS18040 PF01555 DNA methylase EB778_RS18040 PF18273 Type III R-M EcoP15I C-terminal domain EB778_RS18045 PF07690 Major Facilitator Superfamily EB778_RS18055 PF00376 MerR family regulatory protein EB778_RS18055 PF09278 MerR, DNA binding EB778_RS18060 PF00403 Heavy-metal-associated domain EB778_RS18065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EB778_RS18070 PF00873 AcrB/AcrD/AcrF family EB778_RS18075 PF02321 Outer membrane efflux protein EB778_RS18095 PF13505 Outer membrane protein beta-barrel domain EB778_RS18110 PF12792 CSS motif domain associated with EAL EB778_RS18110 PF00563 EAL domain EB778_RS18125 PF16970 Type-1 fimbrial protein, A EB778_RS18130 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS18130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS18135 PF13953 PapC C-terminal domain EB778_RS18135 PF13954 PapC N-terminal domain EB778_RS18135 PF00577 Outer membrane usher protein EB778_RS18145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS18145 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS18160 PF03466 LysR substrate binding domain EB778_RS18165 PF00561 alpha/beta hydrolase fold EB778_RS18170 PF01557 Fumarylacetoacetate (FAA) hydrolase family EB778_RS18175 PF00694 Aconitase C-terminal domain EB778_RS18180 PF00330 Aconitase family (aconitate hydratase) EB778_RS18185 PF07690 Major Facilitator Superfamily EB778_RS18190 PF08986 Domain of unknown function (DUF1889) EB778_RS18195 PF08841 Diol dehydratase reactivase ATPase-like domain EB778_RS18195 PF18427 DD-reactivating factor swiveling domain EB778_RS18210 PF00589 Phage integrase family EB778_RS18210 PF13356 Arm DNA-binding domain EB778_RS18215 PF14282 FlxA-like protein EB778_RS18230 PF02796 Helix-turn-helix domain of resolvase EB778_RS18230 PF00239 Resolvase, N terminal domain EB778_RS18235 PF07487 SopE GEF domain EB778_RS18235 PF05364 Salmonella type III secretion SopE effector N-terminus EB778_RS18240 PF02413 Caudovirales tail fibre assembly protein, lambda gpK EB778_RS18250 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) EB778_RS18255 PF04865 Baseplate J-like protein EB778_RS18275 PF07157 DNA circularisation protein N-terminus EB778_RS18305 PF04984 Phage tail sheath protein subtilisin-like domain EB778_RS18305 PF17482 Phage tail sheath C-terminal domain EB778_RS18350 PF04860 Phage portal protein EB778_RS18360 PF03354 Phage Terminase EB778_RS18395 PF01555 DNA methylase EB778_RS18405 PF03589 Antitermination protein EB778_RS18410 PF06147 Protein of unknown function (DUF968) EB778_RS18420 PF05866 Endodeoxyribonuclease RusA EB778_RS18425 PF00717 Peptidase S24-like EB778_RS18425 PF01726 LexA DNA binding domain EB778_RS18430 PF05869 DNA N-6-adenine-methyltransferase (Dam) EB778_RS18435 PF06069 PerC transcriptional activator EB778_RS18460 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT EB778_RS18465 PF00717 Peptidase S24-like EB778_RS18485 PF10065 Uncharacterized conserved protein (DUF2303) EB778_RS18510 PF00589 Phage integrase family EB778_RS18520 PF00171 Aldehyde dehydrogenase family EB778_RS18525 PF00696 Amino acid kinase family EB778_RS18525 PF01472 PUA domain EB778_RS18530 PF00267 Gram-negative porin EB778_RS18535 PF07417 Sigma factor-binding transcriptional regulator Crl EB778_RS18540 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) EB778_RS18545 PF00156 Phosphoribosyl transferase domain EB778_RS18550 PF01546 Peptidase family M20/M25/M40 EB778_RS18550 PF07687 Peptidase dimerisation domain EB778_RS18560 PF00472 RF-1 domain EB778_RS18570 PF11799 impB/mucB/samB family C-terminal domain EB778_RS18570 PF11798 IMS family HHH motif EB778_RS18570 PF00817 impB/mucB/samB family EB778_RS18575 PF03734 L,D-transpeptidase catalytic domain EB778_RS18580 PF13230 Glutamine amidotransferases class-II EB778_RS18585 PF13580 SIS domain EB778_RS18590 PF02770 Acyl-CoA dehydrogenase, middle domain EB778_RS18590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EB778_RS18590 PF09317 Domain of unknown function (DUF1974) EB778_RS18590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EB778_RS18595 PF00795 Carbon-nitrogen hydrolase EB778_RS18605 PF13505 Outer membrane protein beta-barrel domain EB778_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS18615 PF03466 LysR substrate binding domain EB778_RS18635 PF13953 PapC C-terminal domain EB778_RS18635 PF13954 PapC N-terminal domain EB778_RS18635 PF00577 Outer membrane usher protein EB778_RS18640 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS18640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS18700 PF05593 RHS Repeat EB778_RS18700 PF03527 RHS protein EB778_RS18710 PF04717 Type VI secretion system, phage-baseplate injector EB778_RS18710 PF06715 Gp5 C-terminal repeat (3 copies) EB778_RS18740 PF14331 ImcF-related N-terminal domain EB778_RS18740 PF06744 Type VI secretion protein IcmF C-terminal EB778_RS18740 PF06761 Intracellular multiplication and human macrophage-killing EB778_RS18755 PF05736 OprF membrane domain EB778_RS18755 PF00691 OmpA family EB778_RS18760 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE EB778_RS18800 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath EB778_RS18805 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 EB778_RS18810 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS18810 PF07724 AAA domain (Cdc48 subfamily) EB778_RS18810 PF17871 AAA lid domain EB778_RS18810 PF10431 C-terminal, D2-small domain, of ClpB protein EB778_RS18825 PF04965 Gene 25-like lysozyme EB778_RS18830 PF05947 Type VI secretion system, TssF EB778_RS18850 PF00929 Exonuclease EB778_RS18855 PF00075 RNase H EB778_RS18860 PF08241 Methyltransferase domain EB778_RS18865 PF00753 Metallo-beta-lactamase superfamily EB778_RS18865 PF16123 Hydroxyacylglutathione hydrolase C-terminus EB778_RS18870 PF01464 Transglycosylase SLT domain EB778_RS18870 PF01476 LysM domain EB778_RS18875 PF08241 Methyltransferase domain EB778_RS18880 PF03372 Endonuclease/Exonuclease/phosphatase family EB778_RS18885 PF07690 Major Facilitator Superfamily EB778_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS18890 PF03466 LysR substrate binding domain EB778_RS18895 PF00248 Aldo/keto reductase family EB778_RS18935 PF00005 ABC transporter EB778_RS18935 PF09383 NIL domain EB778_RS18940 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS18945 PF03180 NLPA lipoprotein EB778_RS18950 PF16358 RcsF lipoprotein EB778_RS18955 PF18389 TrmO C-terminal domain EB778_RS18955 PF01980 tRNA-methyltransferase O EB778_RS18960 PF04073 Aminoacyl-tRNA editing domain EB778_RS18960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EB778_RS18960 PF03129 Anticodon binding domain EB778_RS18965 PF04170 NlpE N-terminal domain EB778_RS18965 PF17185 NlpE C-terminal OB domain EB778_RS18970 PF00472 RF-1 domain EB778_RS18975 PF07152 YaeQ protein EB778_RS18980 PF06786 Uncharacterised protein family (UPF0253) EB778_RS18985 PF07073 Modulator of Rho-dependent transcription termination (ROF) EB778_RS18990 PF01171 PP-loop family EB778_RS18990 PF09179 TilS substrate binding domain EB778_RS18990 PF11734 TilS substrate C-terminal domain EB778_RS18995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EB778_RS19000 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EB778_RS19000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EB778_RS19000 PF01276 Orn/Lys/Arg decarboxylase, major domain EB778_RS19005 PF18416 N-acetylglucosamine binding protein domain 2 EB778_RS19005 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EB778_RS19020 PF01797 Transposase IS200 like EB778_RS19025 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EB778_RS19030 PF14579 Helix-hairpin-helix motif EB778_RS19030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EB778_RS19030 PF07733 Bacterial DNA polymerase III alpha NTPase domain EB778_RS19030 PF01336 OB-fold nucleic acid binding domain EB778_RS19030 PF02811 PHP domain EB778_RS19035 PF01351 Ribonuclease HII EB778_RS19040 PF02684 Lipid-A-disaccharide synthetase EB778_RS19045 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS19045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EB778_RS19050 PF07977 FabA-like domain EB778_RS19055 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS19055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EB778_RS19060 PF03938 Outer membrane protein (OmpH-like) EB778_RS19065 PF01103 Surface antigen EB778_RS19065 PF07244 Surface antigen variable number repeat EB778_RS19070 PF17820 PDZ domain EB778_RS19070 PF02163 Peptidase family M50 EB778_RS19080 PF01255 Putative undecaprenyl diphosphate synthase EB778_RS19085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EB778_RS19085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EB778_RS19085 PF13288 DXP reductoisomerase C-terminal domain EB778_RS19090 PF01765 Ribosome recycling factor EB778_RS19095 PF00696 Amino acid kinase family EB778_RS19100 PF00889 Elongation factor TS EB778_RS19105 PF00318 Ribosomal protein S2 EB778_RS19110 PF00557 Metallopeptidase family M24 EB778_RS19115 PF01842 ACT domain EB778_RS19115 PF08335 GlnD PII-uridylyltransferase EB778_RS19115 PF01966 HD domain EB778_RS19115 PF01909 Nucleotidyltransferase domain EB778_RS19120 PF14602 Hexapeptide repeat of succinyl-transferase EB778_RS19120 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EB778_RS19120 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS19125 PF00083 Sugar (and other) transporter EB778_RS19125 PF07690 Major Facilitator Superfamily EB778_RS19130 PF11944 Protein of unknown function (DUF3461) EB778_RS19135 PF17853 GGDEF-like domain EB778_RS19135 PF13556 PucR C-terminal helix-turn-helix domain EB778_RS19135 PF05651 Putative sugar diacid recognition EB778_RS19140 PF00595 PDZ domain EB778_RS19145 PF01966 HD domain EB778_RS19145 PF13286 Phosphohydrolase-associated domain EB778_RS19150 PF01048 Phosphorylase superfamily EB778_RS19155 PF01497 Periplasmic binding protein EB778_RS19160 PF03458 UPF0126 domain EB778_RS19165 PF01521 Iron-sulphur cluster biosynthesis EB778_RS19170 PF00654 Voltage gated chloride channel EB778_RS19175 PF00202 Aminotransferase class-III EB778_RS19180 PF11245 Protein of unknown function (DUF2544) EB778_RS19185 PF00419 Fimbrial protein EB778_RS19190 PF00419 Fimbrial protein EB778_RS19195 PF00419 Fimbrial protein EB778_RS19200 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS19200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS19205 PF13954 PapC N-terminal domain EB778_RS19205 PF00577 Outer membrane usher protein EB778_RS19205 PF13953 PapC C-terminal domain EB778_RS19215 PF01032 FecCD transport family EB778_RS19220 PF01497 Periplasmic binding protein EB778_RS19225 PF00005 ABC transporter EB778_RS19230 PF07715 TonB-dependent Receptor Plug Domain EB778_RS19230 PF00593 TonB dependent receptor EB778_RS19235 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal EB778_RS19235 PF00905 Penicillin binding protein transpeptidase domain EB778_RS19235 PF00912 Transglycosylase EB778_RS19235 PF14814 Bifunctional transglycosylase second domain EB778_RS19240 PF00270 DEAD/DEAH box helicase EB778_RS19240 PF04408 Helicase associated domain (HA2) EB778_RS19240 PF00271 Helicase conserved C-terminal domain EB778_RS19240 PF08482 ATP-dependent helicase C-terminal EB778_RS19245 PF02834 LigT like Phosphoesterase EB778_RS19250 PF03749 Sugar fermentation stimulation protein RE domain EB778_RS19250 PF17746 SfsA N-terminal OB domain EB778_RS19255 PF01258 Prokaryotic dksA/traR C4-type zinc finger EB778_RS19260 PF00749 tRNA synthetases class I (E and Q), catalytic domain EB778_RS19265 PF01743 Poly A polymerase head domain EB778_RS19265 PF12627 Probable RNA and SrmB- binding site of polymerase A EB778_RS19265 PF12626 Polymerase A arginine-rich C-terminus EB778_RS19270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EB778_RS19275 PF02548 Ketopantoate hydroxymethyltransferase EB778_RS19280 PF02569 Pantoate-beta-alanine ligase EB778_RS19285 PF02261 Aspartate decarboxylase EB778_RS19290 PF01522 Polysaccharide deacetylase EB778_RS19295 PF03610 PTS system fructose IIA component EB778_RS19305 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS19305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS19310 PF00577 Outer membrane usher protein EB778_RS19310 PF13953 PapC C-terminal domain EB778_RS19310 PF13954 PapC N-terminal domain EB778_RS19315 PF00419 Fimbrial protein EB778_RS19320 PF01061 ABC-2 type transporter EB778_RS19325 PF00005 ABC transporter EB778_RS19330 PF00484 Carbonic anhydrase EB778_RS19335 PF00156 Phosphoribosyl transferase domain EB778_RS19340 PF01011 PQQ enzyme repeat EB778_RS19345 PF07731 Multicopper oxidase EB778_RS19345 PF07732 Multicopper oxidase EB778_RS19345 PF00394 Multicopper oxidase EB778_RS19350 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) EB778_RS19355 PF17284 Spermidine synthase tetramerisation domain EB778_RS19360 PF02675 S-adenosylmethionine decarboxylase EB778_RS19365 PF08220 DeoR-like helix-turn-helix domain EB778_RS19365 PF00455 DeoR C terminal sensor domain EB778_RS19370 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EB778_RS19375 PF17042 Nucleotide-binding C-terminal domain EB778_RS19375 PF07005 Sugar-binding N-terminal domain EB778_RS19380 PF03812 2-keto-3-deoxygluconate permease EB778_RS19385 PF06062 Uncharacterised protein family (UPF0231) EB778_RS19400 PF00330 Aconitase family (aconitate hydratase) EB778_RS19400 PF06434 Aconitate hydratase 2 N-terminus EB778_RS19400 PF11791 Aconitate B N-terminal domain EB778_RS19430 PF00330 Aconitase family (aconitate hydratase) EB778_RS19430 PF06434 Aconitate hydratase 2 N-terminus EB778_RS19430 PF11791 Aconitate B N-terminal domain EB778_RS19435 PF11737 Protein of unknown function (DUF3300) EB778_RS19450 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS19450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EB778_RS19455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EB778_RS19455 PF00364 Biotin-requiring enzyme EB778_RS19455 PF02817 e3 binding domain EB778_RS19460 PF17831 Pyruvate dehydrogenase E1 component middle domain EB778_RS19460 PF00456 Transketolase, thiamine diphosphate binding domain EB778_RS19465 PF00392 Bacterial regulatory proteins, gntR family EB778_RS19465 PF07729 FCD domain EB778_RS19470 PF00324 Amino acid permease EB778_RS19480 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain EB778_RS19480 PF04616 Glycosyl hydrolases family 43 EB778_RS19485 PF17113 Regulatory signalling modulator protein AmpE EB778_RS19490 PF01510 N-acetylmuramoyl-L-alanine amidase EB778_RS19495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EB778_RS19495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EB778_RS19500 PF07963 Prokaryotic N-terminal methylation motif EB778_RS19505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EB778_RS19505 PF00437 Type II/IV secretion system protein EB778_RS19510 PF00482 Type II secretion system (T2SS), protein F EB778_RS19515 PF00478 IMP dehydrogenase / GMP reductase domain EB778_RS19520 PF01121 Dephospho-CoA kinase EB778_RS19525 PF07072 Cell division protein EB778_RS19530 PF03884 DNA gyrase inhibitor YacG EB778_RS19545 PF00293 NUDIX domain EB778_RS19550 PF07517 SecA DEAD-like domain EB778_RS19550 PF01043 SecA preprotein cross-linking domain EB778_RS19550 PF07516 SecA Wing and Scaffold domain EB778_RS19550 PF02810 SEC-C motif EB778_RS19555 PF06558 Secretion monitor precursor protein (SecM) EB778_RS19560 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EB778_RS19565 PF00091 Tubulin/FtsZ family, GTPase domain EB778_RS19565 PF12327 FtsZ family, C-terminal domain EB778_RS19570 PF02491 SHS2 domain inserted in FTSA EB778_RS19575 PF08478 POTRA domain, FtsQ-type EB778_RS19575 PF03799 Cell division protein FtsQ EB778_RS19580 PF01820 D-ala D-ala ligase N-terminus EB778_RS19580 PF07478 D-ala D-ala ligase C-terminus EB778_RS19585 PF08245 Mur ligase middle domain EB778_RS19585 PF01225 Mur ligase family, catalytic domain EB778_RS19585 PF02875 Mur ligase family, glutamate ligase domain EB778_RS19590 PF04101 Glycosyltransferase family 28 C-terminal domain EB778_RS19590 PF03033 Glycosyltransferase family 28 N-terminal domain EB778_RS19595 PF01098 Cell cycle protein EB778_RS19600 PF02875 Mur ligase family, glutamate ligase domain EB778_RS19600 PF08245 Mur ligase middle domain EB778_RS19605 PF00953 Glycosyl transferase family 4 EB778_RS19605 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EB778_RS19610 PF01225 Mur ligase family, catalytic domain EB778_RS19610 PF02875 Mur ligase family, glutamate ligase domain EB778_RS19610 PF08245 Mur ligase middle domain EB778_RS19615 PF01225 Mur ligase family, catalytic domain EB778_RS19615 PF02875 Mur ligase family, glutamate ligase domain EB778_RS19615 PF08245 Mur ligase middle domain EB778_RS19620 PF00905 Penicillin binding protein transpeptidase domain EB778_RS19620 PF03717 Penicillin-binding Protein dimerisation domain EB778_RS19625 PF04999 Cell division protein FtsL EB778_RS19630 PF01795 MraW methylase family EB778_RS19635 PF02381 MraZ protein, putative antitoxin-like EB778_RS19640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EB778_RS19640 PF00356 Bacterial regulatory proteins, lacI family EB778_RS19645 PF10369 Small subunit of acetolactate synthase EB778_RS19650 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS19650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS19650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS19655 PF03466 LysR substrate binding domain EB778_RS19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS19660 PF08054 Leucine operon leader peptide EB778_RS19665 PF00682 HMGL-like EB778_RS19665 PF08502 LeuA allosteric (dimerisation) domain EB778_RS19670 PF00180 Isocitrate/isopropylmalate dehydrogenase EB778_RS19675 PF00330 Aconitase family (aconitate hydratase) EB778_RS19680 PF00694 Aconitase C-terminal domain EB778_RS19690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS19690 PF12793 Sugar transport-related sRNA regulator N-term EB778_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS19705 PF00005 ABC transporter EB778_RS19710 PF09335 SNARE associated Golgi protein EB778_RS19715 PF12833 Helix-turn-helix domain EB778_RS19715 PF02311 AraC-like ligand binding domain EB778_RS19720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS19725 PF11762 L-arabinose isomerase C-terminal domain EB778_RS19725 PF02610 L-arabinose isomerase EB778_RS19730 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS19750 PF00136 DNA polymerase family B EB778_RS19750 PF03104 DNA polymerase family B, exonuclease domain EB778_RS19755 PF18337 RapA N-terminal Tudor like domain EB778_RS19755 PF00271 Helicase conserved C-terminal domain EB778_RS19755 PF18339 RapA N-terminal Tudor like domain 1 EB778_RS19755 PF12137 RNA polymerase recycling family C-terminal EB778_RS19755 PF00176 SNF2 family N-terminal domain EB778_RS19760 PF00849 RNA pseudouridylate synthase EB778_RS19765 PF05099 Tellurite resistance protein TerB EB778_RS19765 PF00226 DnaJ domain EB778_RS19770 PF03968 OstA-like protein EB778_RS19770 PF04453 LPS transport system D EB778_RS19775 PF09312 SurA N-terminal domain EB778_RS19775 PF00639 PPIC-type PPIASE domain EB778_RS19780 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EB778_RS19785 PF00398 Ribosomal RNA adenine dimethylase EB778_RS19790 PF04379 ApaG domain EB778_RS19795 PF00149 Calcineurin-like phosphoesterase EB778_RS19800 PF00186 Dihydrofolate reductase EB778_RS19805 PF00999 Sodium/hydrogen exchanger family EB778_RS19805 PF02254 TrkA-N domain EB778_RS19810 PF02525 Flavodoxin-like fold EB778_RS19815 PF00884 Sulfatase EB778_RS19830 PF06004 Bacterial protein of unknown function (DUF903) EB778_RS19835 PF00083 Sugar (and other) transporter EB778_RS19845 PF01494 FAD binding domain EB778_RS19850 PF00766 Electron transfer flavoprotein FAD-binding domain EB778_RS19850 PF01012 Electron transfer flavoprotein domain EB778_RS19855 PF01012 Electron transfer flavoprotein domain EB778_RS19860 PF02028 BCCT, betaine/carnitine/choline family transporter EB778_RS19865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EB778_RS19865 PF02770 Acyl-CoA dehydrogenase, middle domain EB778_RS19865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EB778_RS19870 PF02515 CoA-transferase family III EB778_RS19875 PF13193 AMP-binding enzyme C-terminal domain EB778_RS19875 PF00501 AMP-binding enzyme EB778_RS19880 PF00378 Enoyl-CoA hydratase/isomerase EB778_RS19885 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS19890 PF07180 CaiF/GrlA transcriptional regulator EB778_RS19895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EB778_RS19895 PF02142 MGS-like domain EB778_RS19895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EB778_RS19900 PF00117 Glutamine amidotransferase class-I EB778_RS19900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EB778_RS19910 PF05173 Dihydrodipicolinate reductase, C-terminus EB778_RS19910 PF01113 Dihydrodipicolinate reductase, N-terminus EB778_RS19915 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EB778_RS19920 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EB778_RS19925 PF04223 Citrate lyase, alpha subunit (CitF) EB778_RS19930 PF03328 HpcH/HpaI aldolase/citrate lyase family EB778_RS19935 PF06857 Malonate decarboxylase delta subunit (MdcD) EB778_RS19940 PF08218 Citrate lyase ligase C-terminal domain EB778_RS19940 PF00583 Acetyltransferase (GNAT) family EB778_RS19945 PF03390 2-hydroxycarboxylate transporter family EB778_RS19950 PF04277 Oxaloacetate decarboxylase, gamma chain EB778_RS19955 PF02436 Conserved carboxylase domain EB778_RS19955 PF00682 HMGL-like EB778_RS19955 PF00364 Biotin-requiring enzyme EB778_RS19960 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EB778_RS19965 PF17203 Single cache domain 3 EB778_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS19970 PF12431 Transcriptional regulator EB778_RS19970 PF00072 Response regulator receiver domain EB778_RS19975 PF01156 Inosine-uridine preferring nucleoside hydrolase EB778_RS19985 PF02401 LytB protein EB778_RS19990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EB778_RS20000 PF01252 Signal peptidase (SPase) II EB778_RS20005 PF08264 Anticodon-binding domain of tRNA EB778_RS20005 PF00133 tRNA synthetases class I (I, L, M and V) EB778_RS20005 PF06827 Zinc finger found in FPG and IleRS EB778_RS20010 PF06574 FAD synthetase EB778_RS20010 PF01687 Riboflavin kinase EB778_RS20015 PF10837 Protein of unknown function (DUF2575) EB778_RS20020 PF01649 Ribosomal protein S20 EB778_RS20030 PF01055 Glycosyl hydrolases family 31 EB778_RS20035 PF03466 LysR substrate binding domain EB778_RS20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS20040 PF06965 Na+/H+ antiporter 1 EB778_RS20060 PF13186 Iron-sulfur cluster-binding domain EB778_RS20060 PF04055 Radical SAM superfamily EB778_RS20065 PF16385 Domain of unknown function EB778_RS20065 PF00884 Sulfatase EB778_RS20100 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS20100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS20105 PF16970 Type-1 fimbrial protein, A EB778_RS20110 PF00419 Fimbrial protein EB778_RS20115 PF00419 Fimbrial protein EB778_RS20120 PF13953 PapC C-terminal domain EB778_RS20120 PF00577 Outer membrane usher protein EB778_RS20120 PF13954 PapC N-terminal domain EB778_RS20125 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS20125 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS20130 PF00419 Fimbrial protein EB778_RS20145 PF00704 Glycosyl hydrolases family 18 EB778_RS20165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS20165 PF03466 LysR substrate binding domain EB778_RS20170 PF01556 DnaJ C terminal domain EB778_RS20170 PF00684 DnaJ central domain EB778_RS20170 PF00226 DnaJ domain EB778_RS20175 PF00012 Hsp70 protein EB778_RS20180 PF10807 Protein of unknown function (DUF2541) EB778_RS20185 PF13099 Domain of unknown function (DUF3944) EB778_RS20185 PF03981 Ubiquinol-cytochrome C chaperone EB778_RS20190 PF01184 GPR1/FUN34/yaaH family EB778_RS20195 PF00994 Probable molybdopterin binding domain EB778_RS20200 PF00923 Transaldolase/Fructose-6-phosphate aldolase EB778_RS20205 PF01235 Sodium:alanine symporter family EB778_RS20210 PF03883 Peroxide stress protein YaaA EB778_RS20215 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS20215 PF14821 Threonine synthase N terminus EB778_RS20220 PF08544 GHMP kinases C terminal EB778_RS20220 PF00288 GHMP kinases N terminal domain EB778_RS20225 PF00696 Amino acid kinase family EB778_RS20225 PF03447 Homoserine dehydrogenase, NAD binding domain EB778_RS20225 PF00742 Homoserine dehydrogenase EB778_RS20225 PF13840 ACT domain EB778_RS20225 PF01842 ACT domain EB778_RS20230 PF08254 Threonine leader peptide EB778_RS20235 PF00588 SpoU rRNA Methylase family EB778_RS20245 PF00486 Transcriptional regulatory protein, C terminal EB778_RS20245 PF00072 Response regulator receiver domain EB778_RS20255 PF15977 Winged helix-turn-helix DNA binding EB778_RS20265 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS20265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS20270 PF13954 PapC N-terminal domain EB778_RS20270 PF13953 PapC C-terminal domain EB778_RS20270 PF00577 Outer membrane usher protein EB778_RS20285 PF06123 Inner membrane protein CreD EB778_RS20290 PF00672 HAMP domain EB778_RS20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS20290 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS20295 PF00486 Transcriptional regulatory protein, C terminal EB778_RS20295 PF00072 Response regulator receiver domain EB778_RS20300 PF05981 CreA protein EB778_RS20305 PF06445 GyrI-like small molecule binding domain EB778_RS20305 PF12833 Helix-turn-helix domain EB778_RS20310 PF00300 Histidine phosphatase superfamily (branch 1) EB778_RS20315 PF01931 Protein of unknown function DUF84 EB778_RS20320 PF01371 Trp repressor protein EB778_RS20325 PF01464 Transglycosylase SLT domain EB778_RS20325 PF14718 Soluble lytic murein transglycosylase L domain EB778_RS20330 PF00005 ABC transporter EB778_RS20330 PF12848 ABC transporter EB778_RS20335 PF01381 Helix-turn-helix EB778_RS20335 PF13521 AAA domain EB778_RS20340 PF18073 Rubredoxin metal binding domain EB778_RS20345 PF18429 Domain of unknown function (DUF5609) EB778_RS20350 PF10144 Bacterial virulence factor haemolysin EB778_RS20355 PF10437 Bacterial lipoate protein ligase C-terminus EB778_RS20355 PF03099 Biotin/lipoate A/B protein ligase family EB778_RS20365 PF01048 Phosphorylase superfamily EB778_RS20370 PF01676 Metalloenzyme superfamily EB778_RS20375 PF00591 Glycosyl transferase family, a/b domain EB778_RS20375 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EB778_RS20375 PF02885 Glycosyl transferase family, helical bundle domain EB778_RS20380 PF01791 DeoC/LacD family aldolase EB778_RS20385 PF11230 Protein of unknown function (DUF3029) EB778_RS20390 PF04055 Radical SAM superfamily EB778_RS20395 PF01026 TatD related DNase EB778_RS20400 PF01734 Patatin-like phospholipase EB778_RS20405 PF07043 Protein of unknown function (DUF1328) EB778_RS20410 PF04972 BON domain EB778_RS20415 PF16658 Class II release factor RF3, C-terminal domain EB778_RS20415 PF03144 Elongation factor Tu domain 2 EB778_RS20415 PF00009 Elongation factor Tu GTP binding domain EB778_RS20420 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS20425 PF00583 Acetyltransferase (GNAT) family EB778_RS20430 PF03603 DNA polymerase III psi subunit EB778_RS20435 PF08468 Methyltransferase small domain N-terminal EB778_RS20435 PF05175 Methyltransferase small domain EB778_RS20455 PF07256 Protein of unknown function (DUF1435) EB778_RS20460 PF05230 MASE2 domain EB778_RS20460 PF00990 Diguanylate cyclase, GGDEF domain EB778_RS20465 PF06276 Ferric iron reductase FhuF-like transporter EB778_RS20465 PF11575 FhuF 2Fe-2S C-terminal domain EB778_RS20470 PF04073 Aminoacyl-tRNA editing domain EB778_RS20475 PF00196 Bacterial regulatory proteins, luxR family EB778_RS20480 PF00196 Bacterial regulatory proteins, luxR family EB778_RS20485 PF06738 Putative threonine/serine exporter EB778_RS20490 PF12821 Threonine/Serine exporter, ThrE EB778_RS20495 PF17948 DnaT DNA-binding domain EB778_RS20500 PF01695 IstB-like ATP binding protein EB778_RS20505 PF10696 Protein of unknown function (DUF2501) EB778_RS20510 PF00884 Sulfatase EB778_RS20515 PF01380 SIS domain EB778_RS20520 PF01380 SIS domain EB778_RS20525 PF03613 PTS system mannose/fructose/sorbose family IID component EB778_RS20530 PF03609 PTS system sorbose-specific iic component EB778_RS20535 PF03830 PTS system sorbose subfamily IIB component EB778_RS20545 PF00874 PRD domain EB778_RS20545 PF00158 Sigma-54 interaction domain EB778_RS20560 PF02554 Carbon starvation protein CstA EB778_RS20560 PF13722 5TM C-terminal transporter carbon starvation CstA EB778_RS20565 PF04328 Selenoprotein, putative EB778_RS20570 PF02492 CobW/HypB/UreG, nucleotide-binding domain EB778_RS20570 PF07683 Cobalamin synthesis protein cobW C-terminal domain EB778_RS20580 PF00271 Helicase conserved C-terminal domain EB778_RS20580 PF08463 EcoEI R protein C-terminal EB778_RS20580 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EB778_RS20580 PF04851 Type III restriction enzyme, res subunit EB778_RS20585 PF02384 N-6 DNA Methylase EB778_RS20585 PF12161 HsdM N-terminal domain EB778_RS20590 PF01420 Type I restriction modification DNA specificity domain EB778_RS20595 PF08845 Toxin SymE, type I toxin-antitoxin system EB778_RS20620 PF00171 Aldehyde dehydrogenase family EB778_RS20625 PF04754 Putative transposase, YhgA-like EB778_RS20630 PF07690 Major Facilitator Superfamily EB778_RS20635 PF04286 Protein of unknown function (DUF445) EB778_RS20640 PF06779 Uncharacterised MFS-type transporter YbfB EB778_RS20650 PF07670 Nucleoside recognition EB778_RS20655 PF07670 Nucleoside recognition EB778_RS20660 PF01979 Amidohydrolase family EB778_RS20665 PF03466 LysR substrate binding domain EB778_RS20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS20670 PF01177 Asp/Glu/Hydantoin racemase EB778_RS20680 PF00579 tRNA synthetases class I (W and Y) EB778_RS20685 PF00392 Bacterial regulatory proteins, gntR family EB778_RS20685 PF07729 FCD domain EB778_RS20690 PF01738 Dienelactone hydrolase family EB778_RS20695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EB778_RS20695 PF03625 Domain of unknown function DUF302 EB778_RS20715 PF09857 Putative toxin of bacterial toxin-antitoxin pair EB778_RS20720 PF13847 Methyltransferase domain EB778_RS20725 PF01709 Transcriptional regulator EB778_RS20740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EB778_RS20745 PF00580 UvrD/REP helicase N-terminal domain EB778_RS20745 PF13361 UvrD-like helicase C-terminal domain EB778_RS20750 PF00270 DEAD/DEAH box helicase EB778_RS20750 PF09369 Domain of unknown function (DUF1998) EB778_RS20750 PF00271 Helicase conserved C-terminal domain EB778_RS20760 PF12137 RNA polymerase recycling family C-terminal EB778_RS20760 PF18337 RapA N-terminal Tudor like domain EB778_RS20760 PF18339 RapA N-terminal Tudor like domain 1 EB778_RS20760 PF00176 SNF2 family N-terminal domain EB778_RS20760 PF00271 Helicase conserved C-terminal domain EB778_RS20810 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS20810 PF00107 Zinc-binding dehydrogenase EB778_RS20815 PF01202 Shikimate kinase EB778_RS20820 PF00107 Zinc-binding dehydrogenase EB778_RS20820 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS20825 PF00106 short chain dehydrogenase EB778_RS20830 PF02447 GntP family permease EB778_RS20835 PF00356 Bacterial regulatory proteins, lacI family EB778_RS20840 PF03739 Lipopolysaccharide export system permease LptF/LptG EB778_RS20845 PF03739 Lipopolysaccharide export system permease LptF/LptG EB778_RS20850 PF02789 Cytosol aminopeptidase family, N-terminal domain EB778_RS20850 PF00883 Cytosol aminopeptidase family, catalytic domain EB778_RS20855 PF04364 DNA polymerase III chi subunit, HolC EB778_RS20860 PF00133 tRNA synthetases class I (I, L, M and V) EB778_RS20860 PF10458 Valyl tRNA synthetase tRNA binding arm EB778_RS20860 PF08264 Anticodon-binding domain of tRNA EB778_RS20865 PF05987 Bacterial protein of unknown function (DUF898) EB778_RS20870 PF00583 Acetyltransferase (GNAT) family EB778_RS20875 PF12276 Protein of unknown function (DUF3617) EB778_RS20880 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EB778_RS20885 PF06877 Regulator of ribonuclease activity B EB778_RS20890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EB778_RS20890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EB778_RS20895 PF04074 YhcH/YjgK/YiaL EB778_RS20905 PF00696 Amino acid kinase family EB778_RS20910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EB778_RS20910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EB778_RS20915 PF03606 C4-dicarboxylate anaerobic carrier EB778_RS20920 PF02863 Arginine repressor, C-terminal domain EB778_RS20920 PF01316 Arginine repressor, DNA binding domain EB778_RS20930 PF08052 PyrBI operon leader peptide EB778_RS20935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EB778_RS20935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EB778_RS20940 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain EB778_RS20940 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain EB778_RS20945 PF01042 Endoribonuclease L-PSP EB778_RS20955 PF00689 Cation transporting ATPase, C-terminus EB778_RS20955 PF00690 Cation transporter/ATPase, N-terminus EB778_RS20960 PF17059 MgtA leader peptide EB778_RS20965 PF00356 Bacterial regulatory proteins, lacI family EB778_RS20970 PF02378 Phosphotransferase system, EIIC EB778_RS20970 PF00367 phosphotransferase system, EIIB EB778_RS20975 PF00128 Alpha amylase, catalytic domain EB778_RS20975 PF11941 Domain of unknown function (DUF3459) EB778_RS20980 PF03477 ATP cone domain EB778_RS20980 PF13597 Anaerobic ribonucleoside-triphosphate reductase EB778_RS20990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EB778_RS20995 PF01850 PIN domain EB778_RS21000 PF08279 HTH domain EB778_RS21000 PF05043 Mga helix-turn-helix domain EB778_RS21000 PF00874 PRD domain EB778_RS21000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS21005 PF07071 KDGP aldolase EB778_RS21010 PF03841 L-seryl-tRNA selenium transferase EB778_RS21015 PF01979 Amidohydrolase family EB778_RS21045 PF07361 Cytochrome b562 EB778_RS21050 PF01523 Putative modulator of DNA gyrase EB778_RS21055 PF04751 Protein of unknown function (DUF615) EB778_RS21060 PF01261 Xylose isomerase-like TIM barrel EB778_RS21070 PF07690 Major Facilitator Superfamily EB778_RS21075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS21075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EB778_RS21080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS21080 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS21080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS21085 PF00294 pfkB family carbohydrate kinase EB778_RS21090 PF07690 Major Facilitator Superfamily EB778_RS21095 PF01261 Xylose isomerase-like TIM barrel EB778_RS21100 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EB778_RS21105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EB778_RS21105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EB778_RS21110 PF01261 Xylose isomerase-like TIM barrel EB778_RS21125 PF00171 Aldehyde dehydrogenase family EB778_RS21130 PF04962 KduI/IolB family EB778_RS21135 PF00083 Sugar (and other) transporter EB778_RS21145 PF00083 Sugar (and other) transporter EB778_RS21150 PF01380 SIS domain EB778_RS21150 PF01418 Helix-turn-helix domain, rpiR family EB778_RS21150 PF02685 Glucokinase EB778_RS21155 PF02875 Mur ligase family, glutamate ligase domain EB778_RS21155 PF01225 Mur ligase family, catalytic domain EB778_RS21155 PF08245 Mur ligase middle domain EB778_RS21160 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EB778_RS21165 PF00719 Inorganic pyrophosphatase EB778_RS21170 PF01979 Amidohydrolase family EB778_RS21175 PF07690 Major Facilitator Superfamily EB778_RS21180 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EB778_RS21185 PF04357 TamB, inner membrane protein subunit of TAM complex EB778_RS21190 PF07244 Surface antigen variable number repeat EB778_RS21190 PF17243 POTRA domain TamA domain 1 EB778_RS21190 PF01103 Surface antigen EB778_RS21195 PF01625 Peptide methionine sulfoxide reductase EB778_RS21200 PF00571 CBS domain EB778_RS21200 PF03471 Transporter associated domain EB778_RS21200 PF01595 Cyclin M transmembrane N-terminal domain EB778_RS21205 PF06526 Protein of unknown function (DUF1107) EB778_RS21210 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EB778_RS21215 PF00459 Inositol monophosphatase family EB778_RS21220 PF02872 5'-nucleotidase, C-terminal domain EB778_RS21220 PF00149 Calcineurin-like phosphoesterase EB778_RS21225 PF01638 HxlR-like helix-turn-helix EB778_RS21230 PF05368 NmrA-like family EB778_RS21235 PF00892 EamA-like transporter family EB778_RS21240 PF01814 Hemerythrin HHE cation binding domain EB778_RS21240 PF04405 Domain of Unknown function (DUF542) EB778_RS21245 PF00324 Amino acid permease EB778_RS21250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EB778_RS21250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EB778_RS21255 PF08525 Opacity-associated protein A N-terminal motif EB778_RS21255 PF04225 Opacity-associated protein A LysM-like domain EB778_RS21265 PF01281 Ribosomal protein L9, N-terminal domain EB778_RS21265 PF03948 Ribosomal protein L9, C-terminal domain EB778_RS21270 PF01084 Ribosomal protein S18 EB778_RS21275 PF00436 Single-strand binding protein family EB778_RS21280 PF01250 Ribosomal protein S6 EB778_RS21295 PF07338 Protein of unknown function (DUF1471) EB778_RS21300 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS21305 PF01261 Xylose isomerase-like TIM barrel EB778_RS21310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EB778_RS21315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EB778_RS21320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS21325 PF03611 PTS system sugar-specific permease component EB778_RS21335 PF00455 DeoR C terminal sensor domain EB778_RS21335 PF08220 DeoR-like helix-turn-helix domain EB778_RS21340 PF00326 Prolyl oligopeptidase family EB778_RS21345 PF07338 Protein of unknown function (DUF1471) EB778_RS21350 PF07338 Protein of unknown function (DUF1471) EB778_RS21355 PF18158 Adaptive response protein AidB N-terminal domain EB778_RS21355 PF02770 Acyl-CoA dehydrogenase, middle domain EB778_RS21355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EB778_RS21360 PF03738 Glutathionylspermidine synthase preATP-grasp EB778_RS21365 PF06693 Protein of unknown function (DUF1190) EB778_RS21370 PF03994 Domain of Unknown Function (DUF350) EB778_RS21375 PF10679 Protein of unknown function (DUF2491) EB778_RS21380 PF04012 PspA/IM30 family EB778_RS21385 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) EB778_RS21390 PF00588 SpoU rRNA Methylase family EB778_RS21390 PF08032 RNA 2'-O ribose methyltransferase substrate binding EB778_RS21395 PF00575 S1 RNA binding domain EB778_RS21395 PF00773 RNB domain EB778_RS21395 PF08206 Ribonuclease B OB domain EB778_RS21395 PF08461 Ribonuclease R winged-helix domain EB778_RS21395 PF17876 Cold shock domain EB778_RS21400 PF02082 Transcriptional regulator EB778_RS21405 PF00709 Adenylosuccinate synthetase EB778_RS21410 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) EB778_RS21415 PF01145 SPFH domain / Band 7 family EB778_RS21420 PF01145 SPFH domain / Band 7 family EB778_RS21420 PF12221 Bacterial membrane protein N terminal EB778_RS21425 PF16360 GTP-binding GTPase Middle Region EB778_RS21425 PF13167 GTP-binding GTPase N-terminal EB778_RS21425 PF01926 50S ribosome-binding GTPase EB778_RS21430 PF17209 Hfq protein EB778_RS21440 PF01119 DNA mismatch repair protein, C-terminal domain EB778_RS21440 PF08676 MutL C terminal dimerisation domain EB778_RS21445 PF01520 N-acetylmuramoyl-L-alanine amidase EB778_RS21450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EB778_RS21455 PF01256 Carbohydrate kinase EB778_RS21455 PF03853 YjeF-related protein N-terminus EB778_RS21460 PF08331 Domain of unknown function (DUF1730) EB778_RS21485 PF00497 Bacterial extracellular solute-binding proteins, family 3 EB778_RS21490 PF00929 Exonuclease EB778_RS21495 PF03193 RsgA GTPase EB778_RS21500 PF02666 Phosphatidylserine decarboxylase EB778_RS21505 PF12794 Mechanosensitive ion channel inner membrane domain 1 EB778_RS21505 PF00924 Mechanosensitive ion channel EB778_RS21505 PF12795 Mechanosensitive ion channel porin domain EB778_RS21515 PF13520 Amino acid permease EB778_RS21520 PF00152 tRNA synthetases class II (D, K and N) EB778_RS21525 PF02910 Fumarate reductase flavoprotein C-term EB778_RS21525 PF00890 FAD binding domain EB778_RS21530 PF13183 4Fe-4S dicluster domain EB778_RS21530 PF13085 2Fe-2S iron-sulfur cluster binding domain EB778_RS21535 PF02300 Fumarate reductase subunit C EB778_RS21540 PF02313 Fumarate reductase subunit D EB778_RS21545 PF08212 Lipocalin-like domain EB778_RS21550 PF00893 Small Multidrug Resistance protein EB778_RS21555 PF00196 Bacterial regulatory proteins, luxR family EB778_RS21560 PF08085 Entericidin EcnA/B family EB778_RS21565 PF08085 Entericidin EcnA/B family EB778_RS21570 PF08207 Elongation factor P (EF-P) KOW-like domain EB778_RS21570 PF09285 Elongation factor P, C-terminal EB778_RS21570 PF01132 Elongation factor P (EF-P) OB domain EB778_RS21575 PF04055 Radical SAM superfamily EB778_RS21580 PF15922 YjeJ-like EB778_RS21585 PF13698 Domain of unknown function (DUF4156) EB778_RS21590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EB778_RS21595 PF00118 TCP-1/cpn60 chaperonin family EB778_RS21600 PF00166 Chaperonin 10 Kd subunit EB778_RS21605 PF13520 Amino acid permease EB778_RS21610 PF04186 FxsA cytoplasmic membrane protein EB778_RS21615 PF10415 Fumarase C C-terminus EB778_RS21615 PF00206 Lyase EB778_RS21620 PF03605 Anaerobic c4-dicarboxylate membrane transporter EB778_RS21625 PF03091 CutA1 divalent ion tolerance protein EB778_RS21630 PF02683 Cytochrome C biogenesis protein transmembrane region EB778_RS21630 PF11412 Disulphide bond corrector protein DsbC EB778_RS21645 PF00589 Phage integrase family EB778_RS21645 PF13356 Arm DNA-binding domain EB778_RS21705 PF00376 MerR family regulatory protein EB778_RS21705 PF09278 MerR, DNA binding EB778_RS21715 PF01569 PAP2 superfamily EB778_RS21720 PF06977 SdiA-regulated EB778_RS21735 PF01323 DSBA-like thioredoxin domain EB778_RS21750 PF13954 PapC N-terminal domain EB778_RS21750 PF13953 PapC C-terminal domain EB778_RS21750 PF00577 Outer membrane usher protein EB778_RS21755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EB778_RS21755 PF02753 Pili assembly chaperone PapD, C-terminal domain EB778_RS21760 PF03333 Adhesin biosynthesis transcription regulatory protein EB778_RS21790 PF12833 Helix-turn-helix domain EB778_RS21795 PF00072 Response regulator receiver domain EB778_RS21795 PF00196 Bacterial regulatory proteins, luxR family EB778_RS21810 PF06977 SdiA-regulated EB778_RS21820 PF02613 Nitrate reductase delta subunit EB778_RS21825 PF04976 DMSO reductase anchor subunit (DmsC) EB778_RS21830 PF13247 4Fe-4S dicluster domain EB778_RS21830 PF12800 4Fe-4S binding domain EB778_RS21835 PF00384 Molybdopterin oxidoreductase EB778_RS21835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EB778_RS21835 PF01568 Molydopterin dinucleotide binding domain EB778_RS21840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS21840 PF00989 PAS fold EB778_RS21840 PF17203 Single cache domain 3 EB778_RS21840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EB778_RS21845 PF00072 Response regulator receiver domain EB778_RS21855 PF03605 Anaerobic c4-dicarboxylate membrane transporter EB778_RS21860 PF05683 Fumarase C-terminus EB778_RS21860 PF05681 Fumarate hydratase (Fumerase) EB778_RS21870 PF11975 Family 4 glycosyl hydrolase C-terminal domain EB778_RS21870 PF02056 Family 4 glycosyl hydrolase EB778_RS21875 PF12833 Helix-turn-helix domain EB778_RS21880 PF01276 Orn/Lys/Arg decarboxylase, major domain EB778_RS21880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EB778_RS21880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EB778_RS21885 PF12833 Helix-turn-helix domain EB778_RS21890 PF13520 Amino acid permease EB778_RS21895 PF08019 Phosphoethanolamine transferase EptA/EptB EB778_RS21895 PF00884 Sulfatase EB778_RS21900 PF00072 Response regulator receiver domain EB778_RS21900 PF00486 Transcriptional regulatory protein, C terminal EB778_RS21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS21905 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS21915 PF00083 Sugar (and other) transporter EB778_RS21915 PF08946 Osmosensory transporter coiled coil EB778_RS21920 PF03831 PhnA domain EB778_RS21920 PF08274 PhnA Zinc-Ribbon EB778_RS21925 PF06983 3-demethylubiquinone-9 3-methyltransferase EB778_RS21930 PF00583 Acetyltransferase (GNAT) family EB778_RS21945 PF08238 Sel1 repeat EB778_RS21950 PF00375 Sodium:dicarboxylate symporter family EB778_RS21960 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EB778_RS21960 PF01578 Cytochrome C assembly protein EB778_RS21965 PF03916 Polysulphide reductase, NrfD EB778_RS21970 PF00037 4Fe-4S binding domain EB778_RS21970 PF13247 4Fe-4S dicluster domain EB778_RS21975 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) EB778_RS21975 PF13435 Cytochrome c554 and c-prime EB778_RS21980 PF02335 Cytochrome c552 EB778_RS21985 PF16177 Acetyl-coenzyme A synthetase N-terminus EB778_RS21985 PF13193 AMP-binding enzyme C-terminal domain EB778_RS21985 PF00501 AMP-binding enzyme EB778_RS21990 PF04341 Protein of unknown function, DUF485 EB778_RS21995 PF00474 Sodium:solute symporter family EB778_RS22000 PF04172 LrgB-like family EB778_RS22005 PF03788 LrgA family EB778_RS22010 PF03466 LysR substrate binding domain EB778_RS22010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS22015 PF00999 Sodium/hydrogen exchanger family EB778_RS22020 PF00860 Permease family EB778_RS22030 PF00376 MerR family regulatory protein EB778_RS22030 PF09278 MerR, DNA binding EB778_RS22035 PF12833 Helix-turn-helix domain EB778_RS22040 PF00563 EAL domain EB778_RS22040 PF12792 CSS motif domain associated with EAL EB778_RS22045 PF15940 Family of unknown function EB778_RS22050 PF00664 ABC transporter transmembrane region EB778_RS22050 PF00005 ABC transporter EB778_RS22085 PF00436 Single-strand binding protein family EB778_RS22090 PF17755 UvrA DNA-binding domain EB778_RS22090 PF00005 ABC transporter EB778_RS22090 PF17760 UvrA interaction domain EB778_RS22105 PF04237 YjbR EB778_RS22110 PF01894 Uncharacterised protein family UPF0047 EB778_RS22115 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EB778_RS22120 PF00155 Aminotransferase class I and II EB778_RS22125 PF00842 Alanine racemase, C-terminal domain EB778_RS22125 PF01168 Alanine racemase, N-terminal domain EB778_RS22130 PF00772 DnaB-like helicase N terminal domain EB778_RS22130 PF03796 DnaB-like helicase C terminal domain EB778_RS22135 PF08240 Alcohol dehydrogenase GroES-like domain EB778_RS22135 PF00107 Zinc-binding dehydrogenase EB778_RS22140 PF09583 Phage shock protein G (Phageshock_PspG) EB778_RS22145 PF01207 Dihydrouridine synthase (Dus) EB778_RS22155 PF01475 Ferric uptake regulator family EB778_RS22160 PF05532 CsbD-like EB778_RS22170 PF01554 MatE EB778_RS22175 PF00717 Peptidase S24-like EB778_RS22175 PF01726 LexA DNA binding domain EB778_RS22180 PF01219 Prokaryotic diacylglycerol kinase EB778_RS22185 PF01553 Acyltransferase EB778_RS22190 PF01040 UbiA prenyltransferase family EB778_RS22195 PF04345 Chorismate lyase EB778_RS22200 PF07148 Maltose operon periplasmic protein precursor (MalM) EB778_RS22205 PF02264 LamB porin EB778_RS22210 PF17912 MalK OB fold domain EB778_RS22210 PF00005 ABC transporter EB778_RS22215 PF01547 Bacterial extracellular solute-binding protein EB778_RS22220 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS22220 PF14785 Maltose transport system permease protein MalF P2 domain EB778_RS22225 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS22230 PF06146 Phosphate-starvation-inducible E EB778_RS22235 PF06082 Exopolysaccharide biosynthesis protein YbjH EB778_RS22240 PF06251 Capsule biosynthesis GfcC EB778_RS22245 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF EB778_RS22255 PF00342 Phosphoglucose isomerase EB778_RS22260 PF00696 Amino acid kinase family EB778_RS22260 PF01842 ACT domain EB778_RS22265 PF08765 Mor transcription activator family EB778_RS22345 PF04138 GtrA-like protein EB778_RS22350 PF00535 Glycosyl transferase family 2 EB778_RS22375 PF03335 Phage tail fibre repeat EB778_RS22375 PF07484 Phage Tail Collar Domain EB778_RS22375 PF08400 Prophage tail fibre N-terminal EB778_RS22400 PF01758 Sodium Bile acid symporter family EB778_RS22405 PF11656 YjbD family (DUF3811) EB778_RS22410 PF01479 S4 domain EB778_RS22410 PF00849 RNA pseudouridylate synthase EB778_RS22415 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EB778_RS22425 PF03575 Peptidase family S51 EB778_RS22430 PF02690 Na+/Pi-cotransporter EB778_RS22435 PF02310 B12 binding domain EB778_RS22435 PF00809 Pterin binding enzyme EB778_RS22435 PF02965 Vitamin B12 dependent methionine synthase, activation domain EB778_RS22435 PF02607 B12 binding domain EB778_RS22435 PF02574 Homocysteine S-methyltransferase EB778_RS22440 PF09339 IclR helix-turn-helix domain EB778_RS22440 PF01614 Bacterial transcriptional regulator EB778_RS22450 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EB778_RS22455 PF00463 Isocitrate lyase family EB778_RS22460 PF01274 Malate synthase EB778_RS22465 PF04204 Homoserine O-succinyltransferase EB778_RS22470 PF13673 Acetyltransferase (GNAT) domain EB778_RS22495 PF01808 AICARFT/IMPCHase bienzyme EB778_RS22495 PF02142 MGS-like domain EB778_RS22500 PF02844 Phosphoribosylglycinamide synthetase, N domain EB778_RS22500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EB778_RS22500 PF02843 Phosphoribosylglycinamide synthetase, C domain EB778_RS22505 PF00072 Response regulator receiver domain EB778_RS22505 PF00158 Sigma-54 interaction domain EB778_RS22505 PF02954 Bacterial regulatory protein, Fis family EB778_RS22510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS22510 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS22515 PF13801 Heavy-metal resistance EB778_RS22520 PF07356 Protein of unknown function (DUF1481) EB778_RS22525 PF00216 Bacterial DNA-binding protein EB778_RS22530 PF04222 Protein of unknown function (DUF416) EB778_RS22535 PF04493 Endonuclease V EB778_RS22540 PF01208 Uroporphyrinogen decarboxylase (URO-D) EB778_RS22545 PF00293 NUDIX domain EB778_RS22545 PF09297 NADH pyrophosphatase zinc ribbon domain EB778_RS22550 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EB778_RS22555 PF01964 Radical SAM ThiC family EB778_RS22555 PF13667 ThiC-associated domain EB778_RS22560 PF02581 Thiamine monophosphate synthase EB778_RS22565 PF00899 ThiF family EB778_RS22570 PF02597 ThiS family EB778_RS22575 PF05690 Thiazole biosynthesis protein ThiG EB778_RS22580 PF04055 Radical SAM superfamily EB778_RS22580 PF06968 Biotin and Thiamin Synthesis associated domain EB778_RS22605 PF04997 RNA polymerase Rpb1, domain 1 EB778_RS22605 PF04998 RNA polymerase Rpb1, domain 5 EB778_RS22605 PF00623 RNA polymerase Rpb1, domain 2 EB778_RS22605 PF05000 RNA polymerase Rpb1, domain 4 EB778_RS22605 PF04983 RNA polymerase Rpb1, domain 3 EB778_RS22610 PF10385 RNA polymerase beta subunit external 1 domain EB778_RS22610 PF04563 RNA polymerase beta subunit EB778_RS22610 PF00562 RNA polymerase Rpb2, domain 6 EB778_RS22610 PF04565 RNA polymerase Rpb2, domain 3 EB778_RS22610 PF04560 RNA polymerase Rpb2, domain 7 EB778_RS22610 PF04561 RNA polymerase Rpb2, domain 2 EB778_RS22615 PF00542 Ribosomal protein L7/L12 C-terminal domain EB778_RS22615 PF16320 Ribosomal protein L7/L12 dimerisation domain EB778_RS22620 PF00466 Ribosomal protein L10 EB778_RS22625 PF00687 Ribosomal protein L1p/L10e family EB778_RS22630 PF00298 Ribosomal protein L11, RNA binding domain EB778_RS22630 PF03946 Ribosomal protein L11, N-terminal domain EB778_RS22635 PF02357 Transcription termination factor nusG EB778_RS22635 PF00467 KOW motif EB778_RS22640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EB778_RS22645 PF03144 Elongation factor Tu domain 2 EB778_RS22645 PF03143 Elongation factor Tu C-terminal domain EB778_RS22645 PF00009 Elongation factor Tu GTP binding domain EB778_RS22675 PF00485 Phosphoribulokinase / Uridine kinase family EB778_RS22680 PF02237 Biotin protein ligase C terminal domain EB778_RS22680 PF08279 HTH domain EB778_RS22680 PF03099 Biotin/lipoate A/B protein ligase family EB778_RS22685 PF01565 FAD binding domain EB778_RS22685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EB778_RS22715 PF01177 Asp/Glu/Hydantoin racemase EB778_RS22720 PF07715 TonB-dependent Receptor Plug Domain EB778_RS22720 PF00593 TonB dependent receptor EB778_RS22725 PF05958 tRNA (Uracil-5-)-methyltransferase EB778_RS22730 PF07226 Protein of unknown function (DUF1422) EB778_RS22735 PF00440 Bacterial regulatory proteins, tetR family EB778_RS22740 PF07992 Pyridine nucleotide-disulphide oxidoreductase EB778_RS22740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EB778_RS22745 PF03466 LysR substrate binding domain EB778_RS22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS22750 PF00206 Lyase EB778_RS22750 PF14698 Argininosuccinate lyase C-terminal EB778_RS22755 PF00696 Amino acid kinase family EB778_RS22760 PF01118 Semialdehyde dehydrogenase, NAD binding domain EB778_RS22760 PF02774 Semialdehyde dehydrogenase, dimerisation domain EB778_RS22765 PF01546 Peptidase family M20/M25/M40 EB778_RS22765 PF07687 Peptidase dimerisation domain EB778_RS22770 PF00311 Phosphoenolpyruvate carboxylase EB778_RS22775 PF00884 Sulfatase EB778_RS22780 PF12833 Helix-turn-helix domain EB778_RS22785 PF00923 Transaldolase/Fructose-6-phosphate aldolase EB778_RS22790 PF00465 Iron-containing alcohol dehydrogenase EB778_RS22795 PF06940 Domain of unknown function (DUF1287) EB778_RS22800 PF00141 Peroxidase EB778_RS22805 PF02219 Methylenetetrahydrofolate reductase EB778_RS22810 PF00149 Calcineurin-like phosphoesterase EB778_RS22810 PF02872 5'-nucleotidase, C-terminal domain EB778_RS22810 PF17936 Bacterial Ig domain EB778_RS22825 PF00924 Mechanosensitive ion channel EB778_RS22825 PF05552 Conserved TM helix EB778_RS22830 PF00742 Homoserine dehydrogenase EB778_RS22830 PF03447 Homoserine dehydrogenase, NAD binding domain EB778_RS22830 PF00696 Amino acid kinase family EB778_RS22835 PF01053 Cys/Met metabolism PLP-dependent enzyme EB778_RS22840 PF01340 Met Apo-repressor, MetJ EB778_RS22845 PF17425 Arylsulfotransferase Ig-like domain EB778_RS22845 PF05935 Arylsulfotransferase (ASST) EB778_RS22855 PF01197 Ribosomal protein L31 EB778_RS22860 PF00270 DEAD/DEAH box helicase EB778_RS22860 PF00271 Helicase conserved C-terminal domain EB778_RS22860 PF18074 Primosomal protein N C-terminal domain EB778_RS22860 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EB778_RS22860 PF17764 3′ DNA-binding domain (3′BD) EB778_RS22865 PF00356 Bacterial regulatory proteins, lacI family EB778_RS22870 PF05036 Sporulation related domain EB778_RS22875 PF00227 Proteasome subunit EB778_RS22880 PF10431 C-terminal, D2-small domain, of ClpB protein EB778_RS22880 PF00004 ATPase family associated with various cellular activities (AAA) EB778_RS22880 PF07724 AAA domain (Cdc48 subfamily) EB778_RS22885 PF01040 UbiA prenyltransferase family EB778_RS22890 PF03737 Aldolase/RraA EB778_RS22895 PF06005 Cell division protein ZapB EB778_RS22900 PF00230 Major intrinsic protein EB778_RS22905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS22905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS22910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EB778_RS22915 PF00970 Oxidoreductase FAD-binding domain EB778_RS22915 PF00175 Oxidoreductase NAD-binding domain EB778_RS22920 PF05656 Protein of unknown function (DUF805) EB778_RS22925 PF07305 Protein of unknown function (DUF1454) EB778_RS22930 PF00121 Triosephosphate isomerase EB778_RS22940 PF00155 Aminotransferase class I and II EB778_RS22940 PF00392 Bacterial regulatory proteins, gntR family EB778_RS22950 PF00294 pfkB family carbohydrate kinase EB778_RS22960 PF02611 CDP-diacylglycerol pyrophosphatase EB778_RS22970 PF00365 Phosphofructokinase EB778_RS22975 PF16916 Dimerisation domain of Zinc Transporter EB778_RS22975 PF01545 Cation efflux family EB778_RS22980 PF07813 LTXXQ motif family protein EB778_RS22985 PF00072 Response regulator receiver domain EB778_RS22985 PF00486 Transcriptional regulatory protein, C terminal EB778_RS22990 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS22990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS22990 PF00672 HAMP domain EB778_RS22990 PF16527 Two-component sensor protein CpxA, periplasmic domain EB778_RS23005 PF03475 3-alpha domain EB778_RS23005 PF03473 MOSC domain EB778_RS23010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EB778_RS23010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EB778_RS23015 PF03480 Bacterial extracellular solute-binding protein, family 7 EB778_RS23020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EB778_RS23025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EB778_RS23030 PF06178 Oligogalacturonate-specific porin protein (KdgM) EB778_RS23035 PF06379 L-rhamnose-proton symport protein (RhaT) EB778_RS23040 PF02311 AraC-like ligand binding domain EB778_RS23040 PF12833 Helix-turn-helix domain EB778_RS23045 PF02311 AraC-like ligand binding domain EB778_RS23045 PF12833 Helix-turn-helix domain EB778_RS23050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EB778_RS23050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EB778_RS23055 PF06134 L-rhamnose isomerase (RhaA) EB778_RS23060 PF00596 Class II Aldolase and Adducin N-terminal domain EB778_RS23065 PF00465 Iron-containing alcohol dehydrogenase EB778_RS23070 PF05336 L-rhamnose mutarotase EB778_RS23080 PF03591 AzlC protein EB778_RS23090 PF12889 Protein of unknown function (DUF3829) EB778_RS23095 PF12889 Protein of unknown function (DUF3829) EB778_RS23100 PF02634 FdhD/NarQ family EB778_RS23110 PF13247 4Fe-4S dicluster domain EB778_RS23110 PF09163 Formate dehydrogenase N, transmembrane EB778_RS23115 PF01292 Prokaryotic cytochrome b561 EB778_RS23120 PF04216 Protein involved in formate dehydrogenase formation EB778_RS23130 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system EB778_RS23135 PF07859 alpha/beta hydrolase fold EB778_RS23140 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system EB778_RS23145 PF01381 Helix-turn-helix EB778_RS23150 PF09500 Putative thioesterase (yiiD_Cterm) EB778_RS23150 PF00583 Acetyltransferase (GNAT) family EB778_RS23155 PF02580 D-Tyr-tRNA(Tyr) deacylase EB778_RS23160 PF03631 Virulence factor BrkB EB778_RS23165 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS23170 PF00455 DeoR C terminal sensor domain EB778_RS23170 PF08220 DeoR-like helix-turn-helix domain EB778_RS23175 PF00294 pfkB family carbohydrate kinase EB778_RS23180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EB778_RS23180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EB778_RS23185 PF01791 DeoC/LacD family aldolase EB778_RS23195 PF01263 Aldose 1-epimerase EB778_RS23200 PF01055 Glycosyl hydrolases family 31 EB778_RS23215 PF06178 Oligogalacturonate-specific porin protein (KdgM) EB778_RS23235 PF04055 Radical SAM superfamily EB778_RS23250 PF00679 Elongation factor G C-terminus EB778_RS23250 PF00009 Elongation factor Tu GTP binding domain EB778_RS23250 PF03144 Elongation factor Tu domain 2 EB778_RS23255 PF00120 Glutamine synthetase, catalytic domain EB778_RS23255 PF03951 Glutamine synthetase, beta-Grasp domain EB778_RS23260 PF00989 PAS fold EB778_RS23260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EB778_RS23260 PF00512 His Kinase A (phospho-acceptor) domain EB778_RS23265 PF00072 Response regulator receiver domain EB778_RS23265 PF02954 Bacterial regulatory protein, Fis family EB778_RS23265 PF00158 Sigma-54 interaction domain EB778_RS23275 PF04055 Radical SAM superfamily EB778_RS23275 PF06969 HemN C-terminal domain EB778_RS23280 PF04220 Der GTPase activator (YihI) EB778_RS23290 PF01926 50S ribosome-binding GTPase EB778_RS23295 PF01367 5'-3' exonuclease, C-terminal SAM fold EB778_RS23295 PF01612 3'-5' exonuclease EB778_RS23295 PF00476 DNA polymerase family A EB778_RS23295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EB778_RS23300 PF01553 Acyltransferase EB778_RS23305 PF01323 DSBA-like thioredoxin domain EB778_RS23310 PF01636 Phosphotransferase enzyme family EB778_RS23315 PF06288 Protein of unknown function (DUF1040) EB778_RS23320 PF12804 MobA-like NTP transferase domain EB778_RS23325 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EB778_RS23355 PF12724 Flavodoxin domain EB778_RS23360 PF02386 Cation transport protein EB778_RS23365 PF09186 Domain of unknown function (DUF1949) EB778_RS23365 PF01205 Uncharacterized protein family UPF0029 EB778_RS23370 PF00557 Metallopeptidase family M24 EB778_RS23375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EB778_RS23375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EB778_RS23375 PF00378 Enoyl-CoA hydratase/isomerase EB778_RS23380 PF02803 Thiolase, C-terminal domain EB778_RS23380 PF00108 Thiolase, N-terminal domain EB778_RS23385 PF05935 Arylsulfotransferase (ASST) EB778_RS23385 PF17425 Arylsulfotransferase Ig-like domain EB778_RS23390 PF00970 Oxidoreductase FAD-binding domain EB778_RS23390 PF00175 Oxidoreductase NAD-binding domain EB778_RS23395 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EB778_RS23400 PF02357 Transcription termination factor nusG EB778_RS23405 PF01026 TatD related DNase EB778_RS23410 PF00902 Sec-independent protein translocase protein (TatC) EB778_RS23420 PF02416 mttA/Hcf106 family EB778_RS23425 PF03109 ABC1 family EB778_RS23430 PF02036 SCP-2 sterol transfer family EB778_RS23435 PF01209 ubiE/COQ5 methyltransferase family EB778_RS23440 PF02646 RmuC family EB778_RS23445 PF01048 Phosphorylase superfamily EB778_RS23450 PF01738 Dienelactone hydrolase family EB778_RS23455 PF13186 Iron-sulfur cluster-binding domain EB778_RS23455 PF04055 Radical SAM superfamily EB778_RS23465 PF01717 Cobalamin-independent synthase, Catalytic domain EB778_RS23465 PF08267 Cobalamin-independent synthase, N-terminal domain EB778_RS23470 PF03466 LysR substrate binding domain EB778_RS23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS23475 PF00892 EamA-like transporter family EB778_RS23485 PF12146 Serine aminopeptidase, S33 EB778_RS23490 PF01810 LysE type translocator EB778_RS23495 PF01810 LysE type translocator EB778_RS23500 PF00570 HRDC domain EB778_RS23500 PF00270 DEAD/DEAH box helicase EB778_RS23500 PF16124 RecQ zinc-binding EB778_RS23500 PF09382 RQC domain EB778_RS23500 PF00271 Helicase conserved C-terminal domain EB778_RS23505 PF02253 Phospholipase A1 EB778_RS23510 PF03061 Thioesterase superfamily EB778_RS23515 PF00892 EamA-like transporter family EB778_RS23525 PF10947 Protein of unknown function (DUF2628) EB778_RS23530 PF01544 CorA-like Mg2+ transporter protein EB778_RS23535 PF13361 UvrD-like helicase C-terminal domain EB778_RS23535 PF00580 UvrD/REP helicase N-terminal domain EB778_RS23540 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS23545 PF02899 Phage integrase, N-terminal SAM-like domain EB778_RS23545 PF00589 Phage integrase family EB778_RS23550 PF04340 Protein of unknown function, DUF484 EB778_RS23555 PF01678 Diaminopimelate epimerase EB778_RS23560 PF13627 Prokaryotic lipoprotein-attachment site EB778_RS23575 PF01491 Frataxin-like domain EB778_RS23595 PF01295 Adenylate cyclase, class-I EB778_RS23595 PF12633 Adenylate cyclase NT domain EB778_RS23600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EB778_RS23600 PF03900 Porphobilinogen deaminase, C-terminal domain EB778_RS23605 PF02602 Uroporphyrinogen-III synthase HemD EB778_RS23610 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EB778_RS23615 PF07719 Tetratricopeptide repeat EB778_RS23615 PF07219 HemY protein N-terminus EB778_RS23640 PF00324 Amino acid permease EB778_RS23645 PF03808 Glycosyl transferase WecB/TagA/CpsF family EB778_RS23650 PF06899 WzyE protein, O-antigen assembly polymerase EB778_RS23655 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 EB778_RS23660 PF01943 Polysaccharide biosynthesis protein EB778_RS23665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EB778_RS23675 PF00483 Nucleotidyl transferase EB778_RS23675 PF00483 Nucleotidyl transferase EB778_RS23680 PF16363 GDP-mannose 4,6 dehydratase EB778_RS23685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EB778_RS23685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EB778_RS23685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EB778_RS23690 PF02350 UDP-N-acetylglucosamine 2-epimerase EB778_RS23695 PF02706 Chain length determinant protein EB778_RS23700 PF00953 Glycosyl transferase family 4 EB778_RS23705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS23705 PF07498 Rho termination factor, N-terminal domain EB778_RS23705 PF07497 Rho termination factor, RNA-binding domain EB778_RS23715 PF00085 Thioredoxin EB778_RS23720 PF00271 Helicase conserved C-terminal domain EB778_RS23720 PF00270 DEAD/DEAH box helicase EB778_RS23725 PF02541 Ppx/GppA phosphatase family EB778_RS23730 PF13361 UvrD-like helicase C-terminal domain EB778_RS23730 PF00580 UvrD/REP helicase N-terminal domain EB778_RS23735 PF04973 Nicotinamide mononucleotide transporter EB778_RS23740 PF01048 Phosphorylase superfamily EB778_RS23755 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EB778_RS23755 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EB778_RS23760 PF03466 LysR substrate binding domain EB778_RS23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS23775 PF00291 Pyridoxal-phosphate dependent enzyme EB778_RS23775 PF00585 C-terminal regulatory domain of Threonine dehydratase EB778_RS23780 PF00920 Dehydratase family EB778_RS23785 PF01063 Amino-transferase class IV EB778_RS23795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EB778_RS23795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EB778_RS23795 PF00205 Thiamine pyrophosphate enzyme, central domain EB778_RS23800 PF08046 IlvGEDA operon leader peptide EB778_RS23805 PF01078 Magnesium chelatase, subunit ChlI EB778_RS23805 PF13335 Magnesium chelatase, subunit ChlI C-terminal EB778_RS23810 PF04219 Protein of unknown function, DUF EB778_RS23815 PF03466 LysR substrate binding domain EB778_RS23815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS23850 PF00392 Bacterial regulatory proteins, gntR family EB778_RS23850 PF07729 FCD domain EB778_RS23855 PF07690 Major Facilitator Superfamily EB778_RS23860 PF00356 Bacterial regulatory proteins, lacI family EB778_RS23865 PF00294 pfkB family carbohydrate kinase EB778_RS23870 PF13407 Periplasmic binding protein domain EB778_RS23875 PF02653 Branched-chain amino acid transport system / permease component EB778_RS23880 PF00005 ABC transporter EB778_RS23885 PF05025 RbsD / FucU transport protein family EB778_RS23890 PF02705 K+ potassium transporter EB778_RS23895 PF12592 Protein of unknown function (DUF3763) EB778_RS23895 PF17868 AAA lid domain EB778_RS23895 PF07728 AAA domain (dynein-related subfamily) EB778_RS23900 PF05762 VWA domain containing CoxE-like protein EB778_RS23905 PF03590 Aspartate-ammonia ligase EB778_RS23910 PF01037 Lrp/AsnC ligand binding domain EB778_RS23915 PF00258 Flavodoxin EB778_RS23920 PF13932 GidA associated domain EB778_RS23920 PF01134 Glucose inhibited division protein A EB778_RS23925 PF02527 rRNA small subunit methyltransferase G EB778_RS23930 PF03899 ATP synthase I chain EB778_RS23935 PF00119 ATP synthase A chain EB778_RS23940 PF00137 ATP synthase subunit C EB778_RS23945 PF00430 ATP synthase B/B' CF(0) EB778_RS23950 PF00213 ATP synthase delta (OSCP) subunit EB778_RS23955 PF00306 ATP synthase alpha/beta chain, C terminal domain EB778_RS23955 PF02874 ATP synthase alpha/beta family, beta-barrel domain EB778_RS23955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS23960 PF00231 ATP synthase EB778_RS23965 PF02874 ATP synthase alpha/beta family, beta-barrel domain EB778_RS23965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EB778_RS23970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EB778_RS23970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EB778_RS23980 PF00132 Bacterial transferase hexapeptide (six repeats) EB778_RS23980 PF12804 MobA-like NTP transferase domain EB778_RS23985 PF01380 SIS domain EB778_RS23990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EB778_RS23990 PF12793 Sugar transport-related sRNA regulator N-term EB778_RS23995 PF08501 Shikimate dehydrogenase substrate binding domain EB778_RS24000 PF02378 Phosphotransferase system, EIIC EB778_RS24000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EB778_RS24005 PF12849 PBP superfamily domain EB778_RS24010 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS24015 PF00528 Binding-protein-dependent transport system inner membrane component EB778_RS24020 PF00005 ABC transporter EB778_RS24025 PF01895 PhoU domain EB778_RS24030 PF13419 Haloacid dehalogenase-like hydrolase EB778_RS24035 PF00860 Permease family EB778_RS24040 PF03358 NADPH-dependent FMN reductase EB778_RS24050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EB778_RS24050 PF03466 LysR substrate binding domain EB778_RS24055 PF07690 Major Facilitator Superfamily EB778_RS24060 PF10396 GTP-binding protein TrmE N-terminus EB778_RS24060 PF01926 50S ribosome-binding GTPase EB778_RS24060 PF12631 MnmE helical domain EB778_RS24065 PF02096 60Kd inner membrane protein EB778_RS24065 PF14849 YidC periplasmic domain EB778_RS24070 PF01809 Putative membrane protein insertion efficiency factor EB778_RS24075 PF00825 Ribonuclease P EB778_RS24080 PF00468 Ribosomal protein L34