locus-tag class description DOE60_RS00005 IPR004506 tRNA-specific 2-thiouridylase DOE60_RS00005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS00005 IPR023382 Adenine nucleotide alpha hydrolase-like domains DOE60_RS00010 IPR035932 HflD-like superfamily DOE60_RS00010 IPR007451 High frequency lysogenization protein HflD DOE60_RS00015 IPR000362 Fumarate lyase family DOE60_RS00015 IPR020557 Fumarate lyase, conserved site DOE60_RS00015 IPR024083 Fumarase/histidase, N-terminal DOE60_RS00015 IPR022761 Fumarate lyase, N-terminal DOE60_RS00015 IPR008948 L-Aspartase-like DOE60_RS00015 IPR004769 Adenylosuccinate lyase DOE60_RS00015 IPR013539 Adenylosuccinate lyase PurB, C-terminal DOE60_RS00020 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS00020 IPR011006 CheY-like superfamily DOE60_RS00020 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS00020 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS00020 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS00025 IPR003660 HAMP domain DOE60_RS00025 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS00025 IPR038429 PhoQ Sensor superfamily DOE60_RS00025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS00025 IPR015014 PhoQ Sensor DOE60_RS00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS00025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS00025 IPR005467 Histidine kinase domain DOE60_RS00030 IPR003347 JmjC domain DOE60_RS00030 IPR039994 JmjC domain-containing DOE60_RS00040 IPR011650 Peptidase M20, dimerisation domain DOE60_RS00040 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE60_RS00040 IPR036264 Bacterial exopeptidase dimerisation domain DOE60_RS00040 IPR002933 Peptidase M20 DOE60_RS00040 IPR010161 Peptidase M20B, tripeptide aminopeptidase DOE60_RS00045 IPR003593 AAA+ ATPase domain DOE60_RS00045 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA DOE60_RS00045 IPR003439 ABC transporter-like DOE60_RS00045 IPR017871 ABC transporter, conserved site DOE60_RS00045 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS00045 IPR013611 Transport-associated OB, type 2 DOE60_RS00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00045 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DOE60_RS00050 IPR035906 MetI-like superfamily DOE60_RS00050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS00055 IPR010637 Sif DOE60_RS00060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS00060 IPR035906 MetI-like superfamily DOE60_RS00065 IPR006059 Bacterial extracellular solute-binding protein DOE60_RS00065 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DOE60_RS00070 IPR003000 Sirtuin family DOE60_RS00070 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS00070 IPR026591 Sirtuin, catalytic core small domain superfamily DOE60_RS00070 IPR027546 Sirtuin, class III DOE60_RS00070 IPR026590 Sirtuin family, catalytic core domain DOE60_RS00075 IPR000600 ROK family DOE60_RS00075 IPR023505 N-acetyl-D-glucosamine kinase DOE60_RS00080 IPR003838 ABC transporter permease protein domain DOE60_RS00080 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DOE60_RS00080 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type DOE60_RS00080 IPR025857 MacB-like periplasmic core domain DOE60_RS00085 IPR003593 AAA+ ATPase domain DOE60_RS00085 IPR003439 ABC transporter-like DOE60_RS00085 IPR015854 ABC transporter, lipoprotein release, LolD DOE60_RS00085 IPR017871 ABC transporter, conserved site DOE60_RS00085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00085 IPR011924 Lipoprotein releasing system, ATP-binding protein DOE60_RS00090 IPR003838 ABC transporter permease protein domain DOE60_RS00090 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DOE60_RS00090 IPR025857 MacB-like periplasmic core domain DOE60_RS00095 IPR036101 CarD-like/TRCF domain superfamily DOE60_RS00095 IPR037235 TRCF-like, C-terminal domain DOE60_RS00095 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00095 IPR004576 Transcription-repair coupling factor DOE60_RS00095 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS00095 IPR011545 DEAD/DEAH box helicase domain DOE60_RS00095 IPR003711 CarD-like/TRCF domain DOE60_RS00095 IPR005118 Transcription-repair-coupling factor, C-terminal domain DOE60_RS00095 IPR001650 Helicase, C-terminal DOE60_RS00095 IPR041471 UvrB, interaction domain DOE60_RS00100 IPR005490 L,D-transpeptidase catalytic domain DOE60_RS00100 IPR038063 L,D-transpeptidase catalytic domain-like DOE60_RS00100 IPR018392 LysM domain DOE60_RS00100 IPR041597 L,D-transpeptidase C-terminal domain DOE60_RS00105 IPR036275 YdgH-like superfamily DOE60_RS00105 IPR010854 Domain of unknown function DUF1471 DOE60_RS00105 IPR025543 Dodecin-like DOE60_RS00110 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS00110 IPR009057 Homeobox-like domain superfamily DOE60_RS00110 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS00115 IPR008816 Glycine zipper 2TM domain DOE60_RS00120 IPR023753 FAD/NAD(P)-binding domain DOE60_RS00120 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS00125 IPR029058 Alpha/Beta hydrolase fold DOE60_RS00125 IPR022987 Uncharacterised protein family UPF0227 DOE60_RS00125 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DOE60_RS00130 IPR001764 Glycoside hydrolase, family 3, N-terminal DOE60_RS00130 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOE60_RS00130 IPR017853 Glycoside hydrolase superfamily DOE60_RS00130 IPR022956 Beta-hexosaminidase, bacterial DOE60_RS00130 IPR019800 Glycoside hydrolase, family 3, active site DOE60_RS00135 IPR014093 Thiamine kinase DOE60_RS00135 IPR011009 Protein kinase-like domain superfamily DOE60_RS00135 IPR002575 Aminoglycoside phosphotransferase DOE60_RS00140 IPR014094 Penicillin-binding protein activator LpoB DOE60_RS00145 IPR010824 Protein of unknown function DUF1425 DOE60_RS00145 IPR038483 YcfL-like superfamily DOE60_RS00150 IPR036265 HIT-like superfamily DOE60_RS00150 IPR001310 Histidine triad (HIT) protein DOE60_RS00150 IPR019808 Histidine triad, conserved site DOE60_RS00150 IPR011146 HIT-like domain DOE60_RS00155 IPR012910 TonB-dependent receptor, plug domain DOE60_RS00155 IPR010916 TonB box, conserved site DOE60_RS00155 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS00155 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS00155 IPR010105 TonB-dependent siderophore receptor DOE60_RS00155 IPR010917 TonB-dependent receptor, conserved site DOE60_RS00155 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS00155 IPR039423 TonB-dependent receptor-like DOE60_RS00160 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE60_RS00160 IPR001996 Phosphotransferase system, IIB component, type 1 DOE60_RS00160 IPR011299 PTS system glucose-specific IIBC component DOE60_RS00160 IPR036878 Glucose permease domain IIB DOE60_RS00160 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE60_RS00160 IPR003352 Phosphotransferase system, EIIC DOE60_RS00160 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE60_RS00165 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE60_RS00165 IPR032466 Metal-dependent hydrolase DOE60_RS00165 IPR015991 Uncharacterised hydrolase TatD-type DOE60_RS00165 IPR001130 TatD family DOE60_RS00170 IPR004622 DNA polymerase III, delta prime subunit DOE60_RS00170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00170 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE60_RS00170 IPR015199 DNA polymerase III, delta subunit, C-terminal DOE60_RS00175 IPR039430 Thymidylate kinase-like domain DOE60_RS00175 IPR018094 Thymidylate kinase DOE60_RS00175 IPR018095 Thymidylate kinase, conserved site DOE60_RS00175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00180 IPR003770 Endolytic murein transglycosylase DOE60_RS00195 IPR001829 Pili assembly chaperone, bacterial DOE60_RS00195 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS00195 IPR008962 PapD-like superfamily DOE60_RS00195 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS00195 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS00195 IPR013783 Immunoglobulin-like fold DOE60_RS00195 IPR018046 Pili assembly chaperone, conserved site DOE60_RS00200 IPR025949 PapC-like, C-terminal domain DOE60_RS00200 IPR000015 Outer membrane usher protein DOE60_RS00200 IPR025885 PapC, N-terminal domain DOE60_RS00200 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS00200 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS00200 IPR037224 PapC, N-terminal domain superfamily DOE60_RS00220 IPR000794 Beta-ketoacyl synthase DOE60_RS00220 IPR018201 Beta-ketoacyl synthase, active site DOE60_RS00220 IPR014031 Beta-ketoacyl synthase, C-terminal DOE60_RS00220 IPR014030 Beta-ketoacyl synthase, N-terminal DOE60_RS00220 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOE60_RS00220 IPR016039 Thiolase-like DOE60_RS00220 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DOE60_RS00225 IPR003231 Acyl carrier protein (ACP) DOE60_RS00225 IPR009081 Phosphopantetheine binding ACP domain DOE60_RS00225 IPR006162 Phosphopantetheine attachment site DOE60_RS00225 IPR036736 ACP-like superfamily DOE60_RS00230 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS00230 IPR036291 NAD(P)-binding domain superfamily DOE60_RS00230 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS00230 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DOE60_RS00235 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOE60_RS00235 IPR014043 Acyl transferase DOE60_RS00235 IPR024925 Malonyl CoA-acyl carrier protein transacylase DOE60_RS00235 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE60_RS00235 IPR001227 Acyl transferase domain superfamily DOE60_RS00235 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DOE60_RS00240 IPR016039 Thiolase-like DOE60_RS00240 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOE60_RS00240 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DOE60_RS00240 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DOE60_RS00245 IPR012281 Phospholipid biosynthesis protein, PlsX-like DOE60_RS00245 IPR003664 Fatty acid synthesis PlsX protein DOE60_RS00250 IPR002677 Ribosomal protein L32p DOE60_RS00250 IPR011332 Zinc-binding ribosomal protein DOE60_RS00255 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DOE60_RS00255 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DOE60_RS00260 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOE60_RS00260 IPR029001 Inosine triphosphate pyrophosphatase-like DOE60_RS00265 IPR002942 RNA-binding S4 domain DOE60_RS00265 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS00265 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE60_RS00265 IPR006225 Pseudouridine synthase, RluC/RluD DOE60_RS00265 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS00265 IPR036986 RNA-binding S4 domain superfamily DOE60_RS00275 IPR028878 Ribonuclease E DOE60_RS00275 IPR021968 Polyribonucleotide phosphorylase C-terminal DOE60_RS00275 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOE60_RS00275 IPR003029 S1 domain DOE60_RS00275 IPR004659 Ribonuclease E/G DOE60_RS00275 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS00275 IPR022967 RNA-binding domain, S1 DOE60_RS00285 IPR001029 Flagellin, D0/D1 domain DOE60_RS00285 IPR013384 Flagellar hook-associated protein 3 DOE60_RS00290 IPR002371 Flagellar hook-associated protein 1 DOE60_RS00290 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00290 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00290 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE60_RS00295 IPR019301 Flagellar protein FlgJ, N-terminal DOE60_RS00295 IPR013377 Peptidoglycan hydrolase FlgJ DOE60_RS00295 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DOE60_RS00300 IPR001782 Flagellar P-ring protein DOE60_RS00305 IPR000527 Flagellar L-ring protein DOE60_RS00310 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE60_RS00310 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00310 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE60_RS00310 IPR012834 Flagellar basal-body rod FlgG DOE60_RS00310 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00310 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE60_RS00315 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE60_RS00315 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00315 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE60_RS00315 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE60_RS00315 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00320 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE60_RS00320 IPR011491 Flagellar hook protein FlgE DOE60_RS00320 IPR037058 Flagellar hook protein FlgE superfamily DOE60_RS00320 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00320 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00320 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE60_RS00320 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE60_RS00325 IPR005648 Flagellar hook capping protein DOE60_RS00325 IPR025963 FlgD Tudor-like domain DOE60_RS00325 IPR025965 FlgD Ig-like domain DOE60_RS00330 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE60_RS00330 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00330 IPR006299 Flagellar basal-body rod protein FlgC DOE60_RS00330 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00335 IPR006300 Flagellar basal-body rod protein FlgB DOE60_RS00335 IPR001444 Flagellar basal body rod protein, N-terminal DOE60_RS00335 IPR019776 Flagellar basal body rod protein, conserved site DOE60_RS00340 IPR039246 Flagellar protein FlgA DOE60_RS00340 IPR013974 SAF domain DOE60_RS00340 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DOE60_RS00345 IPR035890 Anti-sigma-28 factor FlgM superfamily DOE60_RS00345 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DOE60_RS00345 IPR007412 Anti-sigma-28 factor, FlgM DOE60_RS00350 IPR036679 FlgN-like superfamily DOE60_RS00350 IPR007809 FlgN-like protein DOE60_RS00355 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE60_RS00360 IPR000683 Oxidoreductase, N-terminal DOE60_RS00360 IPR036291 NAD(P)-binding domain superfamily DOE60_RS00365 IPR007432 Protein of unknown function DUF480 DOE60_RS00365 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS00365 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS00370 IPR000182 GNAT domain DOE60_RS00370 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS00375 IPR022855 Multidrug resistance protein MdtH DOE60_RS00375 IPR036259 MFS transporter superfamily DOE60_RS00375 IPR020846 Major facilitator superfamily domain DOE60_RS00375 IPR011701 Major facilitator superfamily DOE60_RS00380 IPR036249 Thioredoxin-like superfamily DOE60_RS00380 IPR011901 Glutaredoxin-2 DOE60_RS00380 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS00380 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS00380 IPR007494 Glutaredoxin 2, C-terminal DOE60_RS00380 IPR011767 Glutaredoxin active site DOE60_RS00385 IPR010835 Protein of unknown function DUF1439 DOE60_RS00390 IPR006680 Amidohydrolase-related DOE60_RS00390 IPR032466 Metal-dependent hydrolase DOE60_RS00390 IPR004721 Dihydroorotase homodimeric type DOE60_RS00390 IPR002195 Dihydroorotase, conserved site DOE60_RS00395 IPR010391 DNA damage-inducible protein DinI-like DOE60_RS00395 IPR036687 DinI-like superfamily DOE60_RS00400 IPR025730 Biofilm regulator BssS DOE60_RS00405 IPR006076 FAD dependent oxidoreductase DOE60_RS00405 IPR023493 N-methyl-L-tryptophan oxidase MTOX DOE60_RS00405 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS00410 IPR024494 Protein of unknown function DUF2770 DOE60_RS00415 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS00415 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS00420 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE60_RS00420 IPR023480 Uncharacterised protein family UPF0312/YceI DOE60_RS00420 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE60_RS00425 IPR040503 UPF0176, acylphosphatase-like domain DOE60_RS00425 IPR001763 Rhodanese-like domain DOE60_RS00425 IPR020936 Uncharacterised protein family UPF0176 DOE60_RS00425 IPR022111 Rhodanase, C-terminal DOE60_RS00425 IPR036873 Rhodanese-like domain superfamily DOE60_RS00430 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE60_RS00430 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOE60_RS00440 IPR011701 Major facilitator superfamily DOE60_RS00440 IPR020846 Major facilitator superfamily domain DOE60_RS00440 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE60_RS00440 IPR036259 MFS transporter superfamily DOE60_RS00440 IPR023692 Multidrug resistance protein MdtG DOE60_RS00445 IPR025729 MsyB protein DOE60_RS00450 IPR010780 Protein of unknown function DUF1375 DOE60_RS00455 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS00455 IPR001173 Glycosyltransferase 2-like DOE60_RS00455 IPR023725 Glucan biosynthesis glucosyltransferase H DOE60_RS00460 IPR014756 Immunoglobulin E-set DOE60_RS00460 IPR023704 Glucan biosynthesis protein G DOE60_RS00460 IPR013783 Immunoglobulin-like fold DOE60_RS00460 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal DOE60_RS00460 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS00460 IPR014438 Glucan biosynthesis protein MdoG/MdoD DOE60_RS00460 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS00465 IPR023723 Glucan biosynthesis protein C DOE60_RS00465 IPR002656 Acyltransferase 3 DOE60_RS00470 IPR030871 Cardiolipin synthase C DOE60_RS00470 IPR025202 Phospholipase D-like domain DOE60_RS00470 IPR001736 Phospholipase D/Transphosphatidylase DOE60_RS00475 IPR002589 Macro domain DOE60_RS00475 IPR024900 O-acetyl-ADP-ribose deacetylase DOE60_RS00485 IPR014491 Curli production protein CsgC DOE60_RS00490 IPR009742 Curlin associated DOE60_RS00495 IPR009742 Curlin associated DOE60_RS00505 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS00505 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS00505 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS00510 IPR018900 Curli assembly protein CsgE DOE60_RS00515 IPR018893 Type VIII secretion system, CsgF DOE60_RS00520 IPR005534 Curli production assembly/transport component CsgG DOE60_RS00525 IPR009476 Protein of unknown function DUF1097 DOE60_RS00530 IPR036411 TorD-like superfamily DOE60_RS00530 IPR026269 Tat proofreading chaperone DmsD-type DOE60_RS00530 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS00535 IPR023710 Probable phosphatase YcdX DOE60_RS00535 IPR004013 PHP domain DOE60_RS00535 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE60_RS00535 IPR016195 Polymerase/histidinol phosphatase-like DOE60_RS00540 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE60_RS00540 IPR023514 Glyoxylate/hydroxypyruvate reductase A DOE60_RS00540 IPR036291 NAD(P)-binding domain superfamily DOE60_RS00580 IPR001734 Sodium/solute symporter DOE60_RS00580 IPR011851 Sodium/proline symporter DOE60_RS00580 IPR038377 Sodium/glucose symporter superfamily DOE60_RS00580 IPR018212 Sodium/solute symporter, conserved site DOE60_RS00590 IPR029041 FAD-linked oxidoreductase-like DOE60_RS00590 IPR013321 Arc-type ribbon-helix-helix DOE60_RS00590 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DOE60_RS00590 IPR024090 Proline dehydrogenase PutA, domain I DOE60_RS00590 IPR024089 Proline dehydrogenase PutA, domain I/II DOE60_RS00590 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DOE60_RS00590 IPR015590 Aldehyde dehydrogenase domain DOE60_RS00590 IPR024082 Proline dehydrogenase PutA, domain II DOE60_RS00590 IPR002872 Proline dehydrogenase domain DOE60_RS00590 IPR010985 Ribbon-helix-helix DOE60_RS00590 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS00590 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS00590 IPR025703 Bifunctional protein PutA DOE60_RS00590 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS00590 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS00590 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS00600 IPR019915 Transcription regulator, pyrimidine utilisation, RutR DOE60_RS00600 IPR013573 Transcription regulator YcdC, C-terminal DOE60_RS00600 IPR009057 Homeobox-like domain superfamily DOE60_RS00600 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS00600 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS00605 IPR019626 Stress-induced protein, KGG, repeat DOE60_RS00610 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS00610 IPR010089 Flavoprotein WrbA-like DOE60_RS00610 IPR029039 Flavoprotein-like superfamily DOE60_RS00610 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic DOE60_RS00610 IPR005025 NADPH-dependent FMN reductase-like DOE60_RS00615 IPR025600 YccJ-like protein DOE60_RS00620 IPR029033 Histidine phosphatase superfamily DOE60_RS00620 IPR033379 Histidine acid phosphatase active site DOE60_RS00620 IPR000560 Histidine phosphatase superfamily, clade-2 DOE60_RS00625 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE60_RS00625 IPR017937 Thioredoxin, conserved site DOE60_RS00625 IPR036249 Thioredoxin-like superfamily DOE60_RS00625 IPR013766 Thioredoxin domain DOE60_RS00630 IPR023171 Na/H antiporter domain superfamily DOE60_RS00630 IPR012336 Thioredoxin-like fold DOE60_RS00630 IPR036249 Thioredoxin-like superfamily DOE60_RS00630 IPR013766 Thioredoxin domain DOE60_RS00630 IPR004670 Na+/H+ antiporter NhaA DOE60_RS00635 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DOE60_RS00635 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DOE60_RS00635 IPR017937 Thioredoxin, conserved site DOE60_RS00635 IPR022910 Thiol:disulphide interchange protein DsbD DOE60_RS00635 IPR012336 Thioredoxin-like fold DOE60_RS00635 IPR036249 Thioredoxin-like superfamily DOE60_RS00635 IPR013766 Thioredoxin domain DOE60_RS00635 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DOE60_RS00635 IPR035671 DsbD gamma DOE60_RS00650 IPR036869 Chaperone J-domain superfamily DOE60_RS00650 IPR018253 DnaJ domain, conserved site DOE60_RS00650 IPR008971 HSP40/DnaJ peptide-binding DOE60_RS00650 IPR001623 DnaJ domain DOE60_RS00650 IPR002939 Chaperone DnaJ, C-terminal DOE60_RS00650 IPR023859 DNA-binding protein, curved-DNA DOE60_RS00655 IPR022835 Chaperone modulatory protein CbpM DOE60_RS00665 IPR014448 Anti-adapter protein IraM DOE60_RS00670 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS00670 IPR001279 Metallo-beta-lactamase DOE60_RS00670 IPR013471 Ribonuclease Z/BN DOE60_RS00680 IPR011701 Major facilitator superfamily DOE60_RS00680 IPR020846 Major facilitator superfamily domain DOE60_RS00680 IPR036259 MFS transporter superfamily DOE60_RS00685 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS00685 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS00685 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE60_RS00685 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales DOE60_RS00685 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase DOE60_RS00690 IPR011234 Fumarylacetoacetase-like, C-terminal DOE60_RS00690 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE60_RS00690 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase DOE60_RS00695 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase DOE60_RS00695 IPR014347 Tautomerase/MIF superfamily DOE60_RS00700 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase DOE60_RS00700 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOE60_RS00705 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS00705 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS00705 IPR015590 Aldehyde dehydrogenase domain DOE60_RS00705 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase DOE60_RS00705 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS00705 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS00705 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS00710 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit DOE60_RS00710 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit DOE60_RS00710 IPR011234 Fumarylacetoacetase-like, C-terminal DOE60_RS00710 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE60_RS00715 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS00715 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS00715 IPR000835 MarR-type HTH domain DOE60_RS00715 IPR023187 Transcriptional regulator MarR-type, conserved site DOE60_RS00715 IPR012712 HTH-type transcriptional regulator HpaR/FarR DOE60_RS00720 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE60_RS00720 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein DOE60_RS00720 IPR004925 HpaB/PvcC/4-BUDH DOE60_RS00720 IPR024719 HpaB/PvcC/4-BUDH C-terminal DOE60_RS00720 IPR024674 HpaB/PvcC/4-BUDH N-terminal DOE60_RS00720 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria DOE60_RS00720 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE60_RS00725 IPR012349 FMN-binding split barrel DOE60_RS00725 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component DOE60_RS00725 IPR002563 Flavin reductase like domain DOE60_RS00745 IPR011006 CheY-like superfamily DOE60_RS00745 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS00745 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS00745 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS00745 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DOE60_RS00745 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS00745 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS00750 IPR005467 Histidine kinase domain DOE60_RS00750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS00750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS00750 IPR006290 Heavy metal sensor kinase DOE60_RS00750 IPR003660 HAMP domain DOE60_RS00750 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS00750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS00750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS00755 IPR005322 Peptidase C69, dipeptidase A DOE60_RS00765 IPR025030 Domain of unknown function DUF3950 DOE60_RS00805 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS00805 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS00805 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS00810 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS00810 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS00810 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS00835 IPR006213 Bax inhibitor 1, conserved site DOE60_RS00835 IPR006214 Bax inhibitor 1-related DOE60_RS00840 IPR007453 Sulphur transfer protein DsrC/TusE DOE60_RS00840 IPR025526 DsrC-like domain superfamily DOE60_RS00840 IPR042072 DsrC-like protein, C-terminal domain DOE60_RS00845 IPR028627 Acylphosphatase, bacteria DOE60_RS00845 IPR036046 Acylphosphatase-like domain superfamily DOE60_RS00845 IPR001792 Acylphosphatase-like domain DOE60_RS00845 IPR020456 Acylphosphatase DOE60_RS00845 IPR017968 Acylphosphatase, conserved site DOE60_RS00850 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS00850 IPR018062 HTH domain AraC-type, conserved site DOE60_RS00850 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS00850 IPR009057 Homeobox-like domain superfamily DOE60_RS00855 IPR036610 PEBP-like superfamily DOE60_RS00855 IPR008914 Phosphatidylethanolamine-binding protein DOE60_RS00855 IPR005247 YbhB/YbcL DOE60_RS00860 IPR015947 PUA-like superfamily DOE60_RS00860 IPR023542 rRNA large subunit methyltransferase I DOE60_RS00860 IPR036974 PUA domain superfamily DOE60_RS00860 IPR041532 RlmI, PUA-like domain DOE60_RS00860 IPR002478 PUA domain DOE60_RS00860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS00860 IPR019614 S-adenosylmethionine-dependent methyltransferase DOE60_RS00865 IPR036623 Hemimethylated DNA-binding domain superfamily DOE60_RS00865 IPR022866 Heat shock protein HspQ DOE60_RS00865 IPR011722 Hemimethylated DNA-binding domain DOE60_RS00870 IPR036291 NAD(P)-binding domain superfamily DOE60_RS00870 IPR003781 CoA-binding DOE60_RS00875 IPR018635 Uncharacterised protein family UPF0319 DOE60_RS00880 IPR004363 Methylglyoxal synthase DOE60_RS00880 IPR036914 Methylglyoxal synthase-like domain superfamily DOE60_RS00880 IPR011607 Methylglyoxal synthase-like domain DOE60_RS00880 IPR018148 Methylglyoxal synthase, active site DOE60_RS00890 IPR005185 Inner membrane component domain DOE60_RS00890 IPR031308 Uncharacterised conserved protein UCP028777 DOE60_RS00895 IPR032692 Integral membrane protein YccS, N-terminal DOE60_RS00895 IPR010020 Integral membrane protein, YccS/YhfK DOE60_RS00895 IPR010019 Integral membrane protein, YccS DOE60_RS00900 IPR007076 TfoX, N-terminal DOE60_RS00900 IPR026256 Transcriptional regulator, TfoX/Sxy-type DOE60_RS00900 IPR007077 TfoX, C-terminal DOE60_RS00905 IPR004596 Cell division suppressor protein, SulA DOE60_RS00905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00910 IPR006665 OmpA-like domain DOE60_RS00910 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS00910 IPR006664 Outer membrane protein, bacterial DOE60_RS00910 IPR000498 Outer membrane protein OmpA-like, transmembrane domain DOE60_RS00910 IPR036737 OmpA-like domain superfamily DOE60_RS00910 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE60_RS00910 IPR002368 Outer membrane protein, OmpA DOE60_RS00915 IPR013321 Arc-type ribbon-helix-helix DOE60_RS00915 IPR038339 MatP, N-terminal domain superfamily DOE60_RS00915 IPR009390 Macrodomain Ter protein, MatP DOE60_RS00915 IPR035375 MatP, C-terminal ribbon-helix-helix domain DOE60_RS00915 IPR035087 MatP, N-terminal DOE60_RS00920 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS00920 IPR027065 Lon protease DOE60_RS00920 IPR008269 Peptidase S16, Lon proteolytic domain DOE60_RS00920 IPR041699 Lon protease, AAA domain DOE60_RS00920 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS00925 IPR029069 HotDog domain superfamily DOE60_RS00925 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA DOE60_RS00925 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOE60_RS00930 IPR023200 Ribosome modulation factor domain superfamily DOE60_RS00930 IPR007040 Ribosome modulation factor DOE60_RS00935 IPR005586 ABC-type transport auxiliary lipoprotein component DOE60_RS00940 IPR003399 Mce/MlaD DOE60_RS00945 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DOE60_RS00945 IPR007498 Intermembrane transport protein PqiA-like DOE60_RS00950 IPR003593 AAA+ ATPase domain DOE60_RS00950 IPR032781 ABC-transporter extension domain DOE60_RS00950 IPR003439 ABC transporter-like DOE60_RS00950 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DOE60_RS00950 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS00950 IPR032524 ABC transporter Uup, C-terminal DOE60_RS00950 IPR017871 ABC transporter, conserved site DOE60_RS00955 IPR019614 S-adenosylmethionine-dependent methyltransferase DOE60_RS00955 IPR017244 Ribosomal RNA large subunit methyltransferase K/L DOE60_RS00955 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS00955 IPR000241 Putative RNA methylase domain DOE60_RS00955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS00955 IPR004114 THUMP domain DOE60_RS00960 IPR005302 Molybdenum cofactor sulfurase, C-terminal DOE60_RS00960 IPR012675 Beta-grasp domain superfamily DOE60_RS00960 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS00960 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS00960 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE60_RS00960 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE60_RS00960 IPR005303 MOSC, N-terminal beta barrel DOE60_RS00965 IPR009809 Cell division protein ZapC DOE60_RS00970 IPR001295 Dihydroorotate dehydrogenase, conserved site DOE60_RS00970 IPR005719 Dihydroorotate dehydrogenase, class 2 DOE60_RS00970 IPR013785 Aldolase-type TIM barrel DOE60_RS00970 IPR005720 Dihydroorotate dehydrogenase domain DOE60_RS00970 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DOE60_RS00975 IPR012779 Peptidase M1, alanyl aminopeptidase DOE60_RS00975 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DOE60_RS00975 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DOE60_RS00975 IPR042097 Aminopeptidase N-like , N-terminal DOE60_RS00975 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DOE60_RS00975 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DOE60_RS00975 IPR027268 Peptidase M4/M1, CTD superfamily DOE60_RS00975 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DOE60_RS00975 IPR014782 Peptidase M1, membrane alanine aminopeptidase DOE60_RS00980 IPR010391 DNA damage-inducible protein DinI-like DOE60_RS00980 IPR036687 DinI-like superfamily DOE60_RS00985 IPR005135 Endonuclease/exonuclease/phosphatase DOE60_RS00985 IPR003539 Cytolethal distending toxin B DOE60_RS00985 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE60_RS01005 IPR008992 Enterotoxin DOE60_RS01020 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS01020 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS01020 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS01070 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS01070 IPR010998 Integrase/recombinase, N-terminal DOE60_RS01070 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS01070 IPR002104 Integrase, catalytic domain DOE60_RS01070 IPR022000 Min27-like integrase, DNA-binding domain DOE60_RS01075 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DOE60_RS01075 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOE60_RS01075 IPR006406 Nicotinate phosphoribosyltransferase DOE60_RS01075 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DOE60_RS01075 IPR007229 Nicotinate phosphoribosyltransferase family DOE60_RS01080 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE60_RS01080 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE60_RS01080 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOE60_RS01080 IPR004522 Asparagine-tRNA ligase DOE60_RS01080 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS01080 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS01085 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS01085 IPR033900 Porin domain, Gram-negative type DOE60_RS01085 IPR023614 Porin domain superfamily DOE60_RS01085 IPR001897 Porin, gammaproteobacterial DOE60_RS01085 IPR001702 Porin, Gram-negative type DOE60_RS01090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS01090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS01090 IPR004839 Aminotransferase, class I/classII DOE60_RS01090 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS01090 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE60_RS01090 IPR000796 Aspartate/other aminotransferase DOE60_RS01095 IPR001279 Metallo-beta-lactamase DOE60_RS01095 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS01100 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE60_RS01100 IPR010275 Protein of unknown function DUF882 DOE60_RS01100 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS01115 IPR032520 MukB, hinge domain DOE60_RS01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01115 IPR012090 Chromosome partition protein MukB DOE60_RS01115 IPR007406 MukB, N-terminal domain DOE60_RS01120 IPR042038 MukE, N-terminal domain DOE60_RS01120 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE DOE60_RS01120 IPR042037 MukE, C-terminal domain DOE60_RS01125 IPR033440 Chromosome partition protein MukF, middle domain DOE60_RS01125 IPR033439 Chromosome partition protein MukF, winged-helix domain DOE60_RS01125 IPR036141 MukF, middle domain superfamily DOE60_RS01125 IPR038198 MukF, C-terminal domain superfamily DOE60_RS01125 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01125 IPR005582 Chromosome partition protein MukF DOE60_RS01125 IPR033441 Chromosome partition protein MukF, C-terminal domain DOE60_RS01125 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS01130 IPR025714 Methyltransferase domain DOE60_RS01130 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase DOE60_RS01135 IPR003848 Domain of unknown function DUF218 DOE60_RS01140 IPR011009 Protein kinase-like domain superfamily DOE60_RS01140 IPR002575 Aminoglycoside phosphotransferase DOE60_RS01145 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS01145 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DOE60_RS01145 IPR003329 Acylneuraminate cytidylyltransferase DOE60_RS01150 IPR005651 Trm112-like DOE60_RS01155 IPR009351 Protein of unknown function DUF1006 DOE60_RS01160 IPR003758 Tetraacyldisaccharide 4'-kinase DOE60_RS01160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01165 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS01165 IPR039421 Type I protein exporter DOE60_RS01165 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS01165 IPR003439 ABC transporter-like DOE60_RS01165 IPR017871 ABC transporter, conserved site DOE60_RS01165 IPR011917 ABC transporter, lipid A export, MsbA DOE60_RS01165 IPR003593 AAA+ ATPase domain DOE60_RS01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01170 IPR035681 ComA-like, MBL domain DOE60_RS01170 IPR004797 Competence protein ComEC/Rec2 DOE60_RS01170 IPR004477 ComEC/Rec2-related protein DOE60_RS01170 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS01170 IPR001279 Metallo-beta-lactamase DOE60_RS01175 IPR020816 Histone-like DNA-binding protein, conserved site DOE60_RS01175 IPR000119 Histone-like DNA-binding protein DOE60_RS01175 IPR005685 Integration host factor, beta subunit DOE60_RS01175 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE60_RS01180 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS01180 IPR022967 RNA-binding domain, S1 DOE60_RS01180 IPR000110 Ribosomal protein S1 DOE60_RS01180 IPR003029 S1 domain DOE60_RS01185 IPR011994 Cytidylate kinase domain DOE60_RS01185 IPR003136 Cytidylate kinase DOE60_RS01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01195 IPR001915 Peptidase M48 DOE60_RS01200 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DOE60_RS01200 IPR001986 Enolpyruvate transferase domain DOE60_RS01200 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOE60_RS01200 IPR036968 Enolpyruvate transferase domain superfamily DOE60_RS01200 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DOE60_RS01205 IPR000192 Aminotransferase class V domain DOE60_RS01205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS01205 IPR022278 Phosphoserine aminotransferase DOE60_RS01205 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE60_RS01205 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS01205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS01210 IPR023090 UPF0702, alpha/beta domain superfamily DOE60_RS01210 IPR007353 Protein of unknown function DUF421 DOE60_RS01215 IPR041080 YcaO cyclodehydratase, C-terminal DOE60_RS01215 IPR003776 YcaO-like domain DOE60_RS01220 IPR023999 Formate transporter FocA, putative DOE60_RS01220 IPR023271 Aquaporin-like DOE60_RS01220 IPR000292 Formate/nitrite transporter DOE60_RS01220 IPR024002 Formate/nitrite transporter, conserved site DOE60_RS01225 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE60_RS01225 IPR001150 Glycine radical domain DOE60_RS01225 IPR004184 Pyruvate formate lyase domain DOE60_RS01225 IPR005949 Formate acetyltransferase DOE60_RS01230 IPR022747 Salmonella outer protein D DOE60_RS01235 IPR013785 Aldolase-type TIM barrel DOE60_RS01235 IPR034457 Organic radical-activating enzymes DOE60_RS01235 IPR012839 Organic radical enzyme activase DOE60_RS01235 IPR007197 Radical SAM DOE60_RS01235 IPR001989 Radical-activating enzyme, conserved site DOE60_RS01235 IPR034465 Pyruvate formate-lyase activase DOE60_RS01235 IPR012838 Pyruvate formate-lyase 1 activating enzyme DOE60_RS01240 IPR038177 Inverse autotransporter, beta-domain superfamily DOE60_RS01240 IPR013783 Immunoglobulin-like fold DOE60_RS01240 IPR003344 Big-1 (bacterial Ig-like domain 1) domain DOE60_RS01240 IPR024519 Inverse autotransporter, beta-domain DOE60_RS01240 IPR003535 Intimin/invasin bacterial adhesion mediator protein DOE60_RS01240 IPR013117 Intimin, C-terminal DOE60_RS01240 IPR016187 C-type lectin fold DOE60_RS01240 IPR015217 Invasin, domain 3 DOE60_RS01240 IPR016186 C-type lectin-like/link domain superfamily DOE60_RS01240 IPR008964 Invasin/intimin cell-adhesion fragments DOE60_RS01245 IPR002293 Amino acid/polyamine transporter I DOE60_RS01250 IPR020846 Major facilitator superfamily domain DOE60_RS01250 IPR036259 MFS transporter superfamily DOE60_RS01250 IPR023745 MSF-type transporter, YcaD DOE60_RS01250 IPR011701 Major facilitator superfamily DOE60_RS01260 IPR007059 DMSO reductase anchor subunit (DmsC) DOE60_RS01265 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS01265 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS01265 IPR014297 Dimethylsulphoxide reductase, chain B DOE60_RS01270 IPR006656 Molybdopterin oxidoreductase DOE60_RS01270 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS01270 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS01270 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE60_RS01270 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS01270 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS01270 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS01270 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS01270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS01275 IPR033729 Serine-tRNA ligase catalytic core domain DOE60_RS01275 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE60_RS01275 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS01275 IPR015866 Serine-tRNA synthetase, type1, N-terminal DOE60_RS01275 IPR002317 Serine-tRNA ligase, type1 DOE60_RS01275 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE60_RS01275 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily DOE60_RS01285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01285 IPR003959 ATPase, AAA-type, core DOE60_RS01285 IPR032423 AAA C-terminal domain DOE60_RS01285 IPR003593 AAA+ ATPase domain DOE60_RS01285 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE60_RS01285 IPR021886 MgsA AAA+ ATPase C-terminal DOE60_RS01290 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOE60_RS01290 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DOE60_RS01290 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria DOE60_RS01295 IPR018541 FtsK gamma domain DOE60_RS01295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01295 IPR002543 FtsK domain DOE60_RS01295 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01295 IPR041027 FtsK alpha domain DOE60_RS01295 IPR025199 DNA translocase FtsK, 4TM region DOE60_RS01295 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01300 IPR019888 Transcription regulator AsnC-type DOE60_RS01300 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE60_RS01300 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE60_RS01300 IPR011008 Dimeric alpha-beta barrel DOE60_RS01300 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS01300 IPR000485 AsnC-type HTH domain DOE60_RS01300 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01300 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01310 IPR023753 FAD/NAD(P)-binding domain DOE60_RS01310 IPR005982 Thioredoxin reductase DOE60_RS01310 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOE60_RS01310 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS01315 IPR003439 ABC transporter-like DOE60_RS01315 IPR039421 Type I protein exporter DOE60_RS01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01315 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD DOE60_RS01315 IPR017871 ABC transporter, conserved site DOE60_RS01315 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS01315 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS01315 IPR003593 AAA+ ATPase domain DOE60_RS01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01320 IPR017871 ABC transporter, conserved site DOE60_RS01320 IPR003439 ABC transporter-like DOE60_RS01320 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC DOE60_RS01320 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS01320 IPR003593 AAA+ ATPase domain DOE60_RS01320 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS01325 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase DOE60_RS01325 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal DOE60_RS01325 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS01335 IPR004368 Translation initiation factor IF-1 DOE60_RS01335 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS01335 IPR006196 RNA-binding domain, S1, IF1 type DOE60_RS01335 IPR022967 RNA-binding domain, S1 DOE60_RS01345 IPR014710 RmlC-like jelly roll fold DOE60_RS01345 IPR012093 Pirin DOE60_RS01345 IPR011051 RmlC-like cupin domain superfamily DOE60_RS01345 IPR003829 Pirin, N-terminal domain DOE60_RS01345 IPR008778 Pirin, C-terminal domain DOE60_RS01350 IPR036380 Isochorismatase-like superfamily DOE60_RS01350 IPR000868 Isochorismatase-like DOE60_RS01360 IPR001270 ClpA/B family DOE60_RS01360 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DOE60_RS01360 IPR004176 Clp, N-terminal DOE60_RS01360 IPR028299 ClpA/B, conserved site 2 DOE60_RS01360 IPR003959 ATPase, AAA-type, core DOE60_RS01360 IPR041546 ClpA/ClpB, AAA lid domain DOE60_RS01360 IPR003593 AAA+ ATPase domain DOE60_RS01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01360 IPR036628 Clp, N-terminal domain superfamily DOE60_RS01360 IPR018368 ClpA/B, conserved site 1 DOE60_RS01360 IPR019489 Clp ATPase, C-terminal DOE60_RS01365 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE60_RS01365 IPR003769 Adaptor protein ClpS, core DOE60_RS01365 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DOE60_RS01370 IPR012156 Cold shock, CspA DOE60_RS01370 IPR011129 Cold shock domain DOE60_RS01370 IPR019844 Cold-shock (CSD) domain DOE60_RS01370 IPR012751 CspD, cold shock DOE60_RS01370 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS01370 IPR002059 Cold-shock protein, DNA-binding DOE60_RS01380 IPR025857 MacB-like periplasmic core domain DOE60_RS01380 IPR017911 ABC transporter, macrolide export, ATP-binding domain DOE60_RS01380 IPR017871 ABC transporter, conserved site DOE60_RS01380 IPR003439 ABC transporter-like DOE60_RS01380 IPR003838 ABC transporter permease protein domain DOE60_RS01380 IPR003593 AAA+ ATPase domain DOE60_RS01380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01385 IPR030190 Macrolide export protein MacA DOE60_RS01385 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS01385 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS01390 IPR007488 Protein of unknown function DUF535 DOE60_RS01395 IPR022602 Protein of unknown function DUF2813 DOE60_RS01395 IPR034139 OLD protein-like, TOPRIM domain DOE60_RS01395 IPR006171 TOPRIM domain DOE60_RS01395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01405 IPR005642 Lysine exporter LysO DOE60_RS01410 IPR010048 Hydroxylamine reductase DOE60_RS01410 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase DOE60_RS01410 IPR016099 Prismane-like, alpha/beta-sandwich DOE60_RS01410 IPR016100 Prismane, alpha-bundle DOE60_RS01410 IPR011254 Prismane-like superfamily DOE60_RS01415 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS01415 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS01415 IPR000951 Phthalate dioxygenase reductase DOE60_RS01415 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS01415 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS01415 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS01415 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE60_RS01415 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS01415 IPR012675 Beta-grasp domain superfamily DOE60_RS01420 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE60_RS01420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS01420 IPR000399 TPP-binding enzyme, conserved site DOE60_RS01420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS01420 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS01420 IPR029061 Thiamin diphosphate-binding fold DOE60_RS01425 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS01425 IPR023603 Threonine aldolase DOE60_RS01425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS01425 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase DOE60_RS01425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS01430 IPR021295 Protein of unknown function DUF2867 DOE60_RS01430 IPR016040 NAD(P)-binding domain DOE60_RS01430 IPR036291 NAD(P)-binding domain superfamily DOE60_RS01435 IPR036291 NAD(P)-binding domain superfamily DOE60_RS01435 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS01440 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOE60_RS01440 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOE60_RS01440 IPR036365 PGBD-like superfamily DOE60_RS01440 IPR036366 PGBD superfamily DOE60_RS01445 IPR035439 UPF0145 domain superfamily DOE60_RS01445 IPR002765 Uncharacterised protein family UPF0145 DOE60_RS01450 IPR024289 Domain of unknown function DUF3828 DOE60_RS01455 IPR017871 ABC transporter, conserved site DOE60_RS01455 IPR003439 ABC transporter-like DOE60_RS01455 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS01455 IPR003593 AAA+ ATPase domain DOE60_RS01455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01460 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS01460 IPR001320 Ionotropic glutamate receptor DOE60_RS01460 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE60_RS01460 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS01465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS01465 IPR035906 MetI-like superfamily DOE60_RS01470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS01470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01470 IPR035906 MetI-like superfamily DOE60_RS01475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS01475 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS01475 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE60_RS01475 IPR001320 Ionotropic glutamate receptor DOE60_RS01495 IPR004703 Phosphotransferase system, sugar-specific permease component DOE60_RS01505 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC DOE60_RS01505 IPR030391 RNA methyltransferase TrmA, conserved site DOE60_RS01505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS01505 IPR010280 (Uracil-5)-methyltransferase family DOE60_RS01505 IPR030390 RNA methyltransferase TrmA, active site DOE60_RS01510 IPR019703 Protein of unknown function DUF2593 DOE60_RS01515 IPR035906 MetI-like superfamily DOE60_RS01515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01520 IPR035906 MetI-like superfamily DOE60_RS01520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01525 IPR003593 AAA+ ATPase domain DOE60_RS01525 IPR013611 Transport-associated OB, type 2 DOE60_RS01525 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DOE60_RS01525 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01525 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS01525 IPR003439 ABC transporter-like DOE60_RS01525 IPR017871 ABC transporter, conserved site DOE60_RS01530 IPR006059 Bacterial extracellular solute-binding protein DOE60_RS01530 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DOE60_RS01535 IPR019660 Putative sensory transduction regulator YbjN DOE60_RS01540 IPR011761 ATP-grasp fold DOE60_RS01540 IPR013651 ATP-grasp fold, RimK-type DOE60_RS01540 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DOE60_RS01540 IPR041107 RimK, PreATP-grasp domain DOE60_RS01540 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS01540 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX DOE60_RS01545 IPR016446 Flavin oxidoreductase Frp family DOE60_RS01545 IPR029479 Nitroreductase DOE60_RS01545 IPR000415 Nitroreductase-like DOE60_RS01550 IPR010815 Protein of unknown function DUF1418 DOE60_RS01555 IPR036249 Thioredoxin-like superfamily DOE60_RS01555 IPR002109 Glutaredoxin DOE60_RS01555 IPR014025 Glutaredoxin subgroup DOE60_RS01555 IPR011902 Glutaredoxin, GrxA DOE60_RS01555 IPR011767 Glutaredoxin active site DOE60_RS01560 IPR020368 Uncharacterised protein family YbjM DOE60_RS01570 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE60_RS01570 IPR006037 Regulator of K+ conductance, C-terminal DOE60_RS01570 IPR023017 Transport protein YbjL, putative DOE60_RS01570 IPR006512 YidE/YbjL duplication DOE60_RS01575 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS01575 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS01575 IPR009057 Homeobox-like domain superfamily DOE60_RS01580 IPR011701 Major facilitator superfamily DOE60_RS01580 IPR020846 Major facilitator superfamily domain DOE60_RS01580 IPR036259 MFS transporter superfamily DOE60_RS01585 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS01585 IPR036412 HAD-like superfamily DOE60_RS01585 IPR000150 Cof family DOE60_RS01585 IPR023214 HAD superfamily DOE60_RS01590 IPR020846 Major facilitator superfamily domain DOE60_RS01590 IPR036259 MFS transporter superfamily DOE60_RS01590 IPR005829 Sugar transporter, conserved site DOE60_RS01590 IPR011701 Major facilitator superfamily DOE60_RS01595 IPR033879 Undecaprenyl-diphosphatase DOE60_RS01595 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE60_RS01595 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE60_RS01600 IPR014036 DeoR C-terminal sensor domain DOE60_RS01600 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS01600 IPR001034 DeoR-type HTH domain DOE60_RS01600 IPR037171 NagB/RpiA transferase-like DOE60_RS01605 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE60_RS01605 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE60_RS01605 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE60_RS01605 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE60_RS01605 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS01605 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE60_RS01610 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS01610 IPR036249 Thioredoxin-like superfamily DOE60_RS01610 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS01610 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS01610 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS01615 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase DOE60_RS01615 IPR012938 Glucose/Sorbosone dehydrogenase DOE60_RS01615 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS01620 IPR020359 Biofilm regulator BssR DOE60_RS01625 IPR002792 TRAM domain DOE60_RS01625 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS01625 IPR007197 Radical SAM DOE60_RS01625 IPR041582 RimO, TRAM domain DOE60_RS01625 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DOE60_RS01625 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE60_RS01625 IPR013848 Methylthiotransferase, N-terminal DOE60_RS01625 IPR020612 Methylthiotransferase, conserved site DOE60_RS01625 IPR005839 Methylthiotransferase DOE60_RS01625 IPR006638 Elp3/MiaB/NifB DOE60_RS01630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01630 IPR035906 MetI-like superfamily DOE60_RS01630 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS01635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01635 IPR035906 MetI-like superfamily DOE60_RS01640 IPR039424 Solute-binding protein family 5 DOE60_RS01640 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS01640 IPR000914 Solute-binding protein family 5 domain DOE60_RS01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01645 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS01645 IPR017871 ABC transporter, conserved site DOE60_RS01645 IPR003439 ABC transporter-like DOE60_RS01645 IPR003593 AAA+ ATPase domain DOE60_RS01650 IPR036688 MoeA, C-terminal, domain IV superfamily DOE60_RS01650 IPR005110 MoeA, N-terminal and linker domain DOE60_RS01650 IPR001453 MoaB/Mog domain DOE60_RS01650 IPR036425 MoaB/Mog-like domain superfamily DOE60_RS01650 IPR038987 Molybdopterin biosynthesis protein MoeA-like DOE60_RS01650 IPR005111 MoeA, C-terminal, domain IV DOE60_RS01650 IPR036135 MoeA, N-terminal and linker domain superfamily DOE60_RS01650 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE60_RS01655 IPR012730 Molybdopterin synthase sulfurylase MoeB DOE60_RS01655 IPR000594 THIF-type NAD/FAD binding fold DOE60_RS01655 IPR035985 Ubiquitin-activating enzyme DOE60_RS01660 IPR034465 Pyruvate formate-lyase activase DOE60_RS01660 IPR012839 Organic radical enzyme activase DOE60_RS01660 IPR007197 Radical SAM DOE60_RS01660 IPR013785 Aldolase-type TIM barrel DOE60_RS01660 IPR034457 Organic radical-activating enzymes DOE60_RS01660 IPR001989 Radical-activating enzyme, conserved site DOE60_RS01665 IPR004184 Pyruvate formate lyase domain DOE60_RS01665 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family DOE60_RS01665 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE60_RS01665 IPR001150 Glycine radical domain DOE60_RS01685 IPR000150 Cof family DOE60_RS01685 IPR023214 HAD superfamily DOE60_RS01685 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS01685 IPR036412 HAD-like superfamily DOE60_RS01690 IPR010856 Protein of unknown function DUF1479 DOE60_RS01690 IPR027443 Isopenicillin N synthase-like DOE60_RS01695 IPR003593 AAA+ ATPase domain DOE60_RS01695 IPR032781 ABC-transporter extension domain DOE60_RS01695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01695 IPR003439 ABC transporter-like DOE60_RS01700 IPR041597 L,D-transpeptidase C-terminal domain DOE60_RS01700 IPR005490 L,D-transpeptidase catalytic domain DOE60_RS01700 IPR038063 L,D-transpeptidase catalytic domain-like DOE60_RS01705 IPR004680 Citrate transporter-like domain DOE60_RS01710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01710 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01710 IPR022689 Iron dependent repressor DOE60_RS01710 IPR022687 DTXR-type HTH domain DOE60_RS01710 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily DOE60_RS01710 IPR001367 Iron dependent repressor, metal binding and dimerisation domain DOE60_RS01720 IPR000917 Sulfatase, N-terminal DOE60_RS01720 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS01720 IPR040423 Phosphoethanolamine transferase DOE60_RS01725 IPR000758 Virulence-related outer membrane protein DOE60_RS01725 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS01725 IPR027385 Outer membrane protein beta-barrel domain DOE60_RS01730 IPR000620 EamA domain DOE60_RS01735 IPR008331 Ferritin/DPS protein domain DOE60_RS01735 IPR009078 Ferritin-like superfamily DOE60_RS01735 IPR012347 Ferritin-like DOE60_RS01735 IPR023067 DNA protection during starvation protein, gammaproteobacteria DOE60_RS01735 IPR023188 DNA-binding protein Dps, conserved site DOE60_RS01735 IPR002177 DNA-binding protein Dps DOE60_RS01745 IPR001320 Ionotropic glutamate receptor DOE60_RS01745 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS01745 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS01750 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS01750 IPR035906 MetI-like superfamily DOE60_RS01750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS01755 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01755 IPR017871 ABC transporter, conserved site DOE60_RS01755 IPR003439 ABC transporter-like DOE60_RS01755 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS01755 IPR003593 AAA+ ATPase domain DOE60_RS01760 IPR010920 LSM domain superfamily DOE60_RS01760 IPR006685 Mechanosensitive ion channel MscS DOE60_RS01760 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS01760 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS01760 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS01765 IPR010286 METTL16/RlmF family DOE60_RS01765 IPR016909 Ribosomal RNA large subunit methyltransferase F DOE60_RS01765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS01770 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOE60_RS01770 IPR000962 Zinc finger, DksA/TraR C4-type DOE60_RS01770 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DOE60_RS01775 IPR036275 YdgH-like superfamily DOE60_RS01775 IPR010854 Domain of unknown function DUF1471 DOE60_RS01775 IPR025543 Dodecin-like DOE60_RS01780 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE60_RS01780 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE60_RS01780 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE60_RS01785 IPR039000 ATP-dependent DNA helicase DinG DOE60_RS01785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01785 IPR010614 DEAD2 DOE60_RS01785 IPR006555 ATP-dependent helicase, C-terminal DOE60_RS01785 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOE60_RS01785 IPR006554 Helicase-like, DEXD box c2 type DOE60_RS01785 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS01785 IPR001650 Helicase, C-terminal DOE60_RS01790 IPR014014 RNA helicase, DEAD-box type, Q motif DOE60_RS01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01790 IPR001650 Helicase, C-terminal DOE60_RS01790 IPR028622 ATP-dependent RNA helicase RhlE DOE60_RS01790 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS01790 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE60_RS01790 IPR011545 DEAD/DEAH box helicase domain DOE60_RS01795 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS01795 IPR009057 Homeobox-like domain superfamily DOE60_RS01795 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS01795 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS01795 IPR015292 Transcription regulator YbiH, C-terminal DOE60_RS01800 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG DOE60_RS01800 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS01810 IPR000412 ABC-2 transporter DOE60_RS01815 IPR000412 ABC-2 transporter DOE60_RS01820 IPR021303 Uncharacterised protein family, inner membrane, YbhQ DOE60_RS01825 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE60_RS01825 IPR005135 Endonuclease/exonuclease/phosphatase DOE60_RS01830 IPR030872 Cardiolipin synthase B DOE60_RS01830 IPR025202 Phospholipase D-like domain DOE60_RS01830 IPR001736 Phospholipase D/Transphosphatidylase DOE60_RS01835 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DOE60_RS01860 IPR006214 Bax inhibitor 1-related DOE60_RS01865 IPR003448 Molybdopterin biosynthesis MoaE DOE60_RS01865 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DOE60_RS01870 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE60_RS01870 IPR012675 Beta-grasp domain superfamily DOE60_RS01870 IPR003749 Sulfur carrier ThiS/MoaD-like DOE60_RS01875 IPR023045 Molybdenum cofactor biosynthesis C DOE60_RS01875 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily DOE60_RS01875 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain DOE60_RS01880 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria DOE60_RS01880 IPR001453 MoaB/Mog domain DOE60_RS01880 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE60_RS01880 IPR012245 Molybdenum cofactor biosynthesis protein MoaB DOE60_RS01880 IPR036425 MoaB/Mog-like domain superfamily DOE60_RS01885 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DOE60_RS01885 IPR013785 Aldolase-type TIM barrel DOE60_RS01885 IPR006638 Elp3/MiaB/NifB DOE60_RS01885 IPR013483 Molybdenum cofactor biosynthesis protein A DOE60_RS01885 IPR007197 Radical SAM DOE60_RS01885 IPR010505 Molybdenum cofactor synthesis C-terminal DOE60_RS01890 IPR010119 Gluconeogenesis factor DOE60_RS01890 IPR038136 Gluconeogenesis factor superfamily DOE60_RS01890 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DOE60_RS01895 IPR001650 Helicase, C-terminal DOE60_RS01895 IPR001943 UVR domain DOE60_RS01895 IPR024759 UvrB, YAD/RRR-motif-containing domain DOE60_RS01895 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS01895 IPR006935 Helicase/UvrB, N-terminal DOE60_RS01895 IPR036876 UVR domain superfamily DOE60_RS01895 IPR004807 UvrABC system, subunit B DOE60_RS01895 IPR041471 UvrB, interaction domain DOE60_RS01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01905 IPR004472 Dethiobiotin synthase BioD DOE60_RS01910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS01910 IPR013216 Methyltransferase type 11 DOE60_RS01910 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DOE60_RS01915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS01915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS01915 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS01915 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria DOE60_RS01915 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DOE60_RS01915 IPR004839 Aminotransferase, class I/classII DOE60_RS01915 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE60_RS01920 IPR007197 Radical SAM DOE60_RS01920 IPR013785 Aldolase-type TIM barrel DOE60_RS01920 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DOE60_RS01920 IPR024177 Biotin synthase DOE60_RS01920 IPR010722 Biotin and thiamin synthesis-associated domain DOE60_RS01920 IPR006638 Elp3/MiaB/NifB DOE60_RS01925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS01925 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DOE60_RS01925 IPR005814 Aminotransferase class-III DOE60_RS01925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS01925 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS01930 IPR008914 Phosphatidylethanolamine-binding protein DOE60_RS01930 IPR005247 YbhB/YbcL DOE60_RS01930 IPR036610 PEBP-like superfamily DOE60_RS01935 IPR001106 Aromatic amino acid lyase DOE60_RS01935 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DOE60_RS01935 IPR008948 L-Aspartase-like DOE60_RS01935 IPR005921 Histidine ammonia-lyase DOE60_RS01935 IPR024083 Fumarase/histidase, N-terminal DOE60_RS01940 IPR036190 Urocanase superfamily DOE60_RS01940 IPR023636 Urocanase conserved site DOE60_RS01940 IPR038364 Urocanase, central domain superfamily DOE60_RS01940 IPR035085 Urocanase, Rossmann-like domain DOE60_RS01940 IPR023637 Urocanase DOE60_RS01940 IPR035401 Urocanase, C-terminal domain DOE60_RS01940 IPR035400 Urocanase, N-terminal domain DOE60_RS01945 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE60_RS01945 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01945 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01945 IPR010248 Histidine utilization repressor DOE60_RS01945 IPR000524 Transcription regulator HTH, GntR DOE60_RS01945 IPR011663 UbiC transcription regulator-associated DOE60_RS01950 IPR023696 Ureohydrolase domain superfamily DOE60_RS01950 IPR006035 Ureohydrolase DOE60_RS01950 IPR005923 Formiminoglutamase DOE60_RS01955 IPR032466 Metal-dependent hydrolase DOE60_RS01955 IPR006680 Amidohydrolase-related DOE60_RS01955 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS01955 IPR005920 Imidazolonepropionase DOE60_RS01960 IPR012334 Pectin lyase fold DOE60_RS01960 IPR011050 Pectin lyase fold/virulence factor DOE60_RS01960 IPR033131 Pectinesterase, Asp active site DOE60_RS01960 IPR000070 Pectinesterase, catalytic DOE60_RS01965 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE60_RS01965 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOE60_RS01965 IPR015932 Aconitase, domain 2 DOE60_RS01965 IPR036008 Aconitase, iron-sulfur domain DOE60_RS01965 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE60_RS01970 IPR001898 Solute carrier family 13 DOE60_RS01970 IPR030676 Citrate carrier CitT-related DOE60_RS01975 IPR007400 PrpF protein DOE60_RS01980 IPR005119 LysR, substrate-binding DOE60_RS01980 IPR000847 Transcription regulator HTH, LysR DOE60_RS01980 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS01980 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS01985 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE60_RS01985 IPR011045 Nitrous oxide reductase, N-terminal DOE60_RS01985 IPR019405 Lactonase, 7-bladed beta propeller DOE60_RS01985 IPR022528 6-phosphogluconolactonase, YbhE-type DOE60_RS01990 IPR023214 HAD superfamily DOE60_RS01990 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS01990 IPR036412 HAD-like superfamily DOE60_RS01990 IPR000150 Cof family DOE60_RS01995 IPR015852 ABC transporter, molybdenum import, ModC DOE60_RS01995 IPR003593 AAA+ ATPase domain DOE60_RS01995 IPR003439 ABC transporter-like DOE60_RS01995 IPR017871 ABC transporter, conserved site DOE60_RS01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS01995 IPR004606 Molybdenum-pterin binding DOE60_RS01995 IPR011868 Molybdate ABC transporter, ATP-binding protein DOE60_RS01995 IPR005116 Transport-associated OB, type 1 DOE60_RS01995 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS02000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS02000 IPR035906 MetI-like superfamily DOE60_RS02000 IPR011867 Molybdate ABC transporter, permease protein DOE60_RS02005 IPR005950 Molybdate ABC transporter, substrate-binding protein DOE60_RS02010 IPR019702 Multidrug efflux pump accessory protein AcrZ DOE60_RS02015 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02015 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS02015 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02015 IPR000847 Transcription regulator HTH, LysR DOE60_RS02015 IPR005116 Transport-associated OB, type 1 DOE60_RS02015 IPR016462 Molybdate-dependent transcriptional regulator ModE DOE60_RS02015 IPR003725 Molybdenum-binding protein ModE, N-terminal DOE60_RS02015 IPR004606 Molybdenum-pterin binding DOE60_RS02020 IPR003593 AAA+ ATPase domain DOE60_RS02020 IPR003439 ABC transporter-like DOE60_RS02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02030 IPR005886 UDP-glucose 4-epimerase DOE60_RS02030 IPR036291 NAD(P)-binding domain superfamily DOE60_RS02030 IPR016040 NAD(P)-binding domain DOE60_RS02035 IPR001937 Galactose-1-phosphate uridyl transferase, class I DOE60_RS02035 IPR036265 HIT-like superfamily DOE60_RS02035 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal DOE60_RS02035 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site DOE60_RS02035 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal DOE60_RS02040 IPR019741 Galactokinase, conserved site DOE60_RS02040 IPR006206 Mevalonate/galactokinase DOE60_RS02040 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS02040 IPR019539 Galactokinase galactose-binding domain DOE60_RS02040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS02040 IPR006204 GHMP kinase N-terminal domain DOE60_RS02040 IPR036554 GHMP kinase, C-terminal domain superfamily DOE60_RS02040 IPR000705 Galactokinase DOE60_RS02040 IPR022963 Galactokinase, bacterial DOE60_RS02040 IPR006203 GHMP kinase, ATP-binding, conserved site DOE60_RS02040 IPR013750 GHMP kinase, C-terminal domain DOE60_RS02045 IPR018052 Aldose 1-epimerase, conserved site DOE60_RS02045 IPR013458 Aldose 1-epimerase, bacterial DOE60_RS02045 IPR015443 Aldose 1-epimerase DOE60_RS02045 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE60_RS02045 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS02045 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS02055 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE60_RS02055 IPR013078 Histidine phosphatase superfamily, clade-1 DOE60_RS02055 IPR005952 Phosphoglycerate mutase 1 DOE60_RS02055 IPR029033 Histidine phosphatase superfamily DOE60_RS02060 IPR017871 ABC transporter, conserved site DOE60_RS02060 IPR003593 AAA+ ATPase domain DOE60_RS02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02060 IPR003439 ABC transporter-like DOE60_RS02065 IPR000522 ABC transporter, permease protein, BtuC-like DOE60_RS02065 IPR037294 ABC transporter, BtuC-like DOE60_RS02070 IPR006219 DHAP synthase, class 1 DOE60_RS02070 IPR006218 DAHP synthetase I/KDSA DOE60_RS02070 IPR013785 Aldolase-type TIM barrel DOE60_RS02075 IPR020363 Uncharacterised protein family YbgS DOE60_RS02080 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOE60_RS02080 IPR023500 Zinc transporter ZitB DOE60_RS02080 IPR002524 Cation efflux protein DOE60_RS02080 IPR027469 Cation efflux transmembrane domain superfamily DOE60_RS02085 IPR006419 Nicotinamide mononucleotide transporter PnuC DOE60_RS02090 IPR003473 Quinolinate synthetase A DOE60_RS02090 IPR036094 Quinolinate synthetase A superfamily DOE60_RS02090 IPR023513 Quinolinate synthase A, type 1 DOE60_RS02125 IPR034706 Cell division coordinator CpoB DOE60_RS02125 IPR014162 Cell division coordinator CpoB, C-terminal DOE60_RS02125 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS02125 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS02125 IPR019734 Tetratricopeptide repeat DOE60_RS02125 IPR032519 YbgF, trimerisation domain DOE60_RS02130 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE60_RS02130 IPR006665 OmpA-like domain DOE60_RS02130 IPR036737 OmpA-like domain superfamily DOE60_RS02130 IPR039001 Peptidoglycan-associated lipoprotein DOE60_RS02130 IPR006664 Outer membrane protein, bacterial DOE60_RS02130 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal DOE60_RS02135 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS02135 IPR011659 WD40-like Beta Propeller DOE60_RS02135 IPR014167 Tol-Pal system protein TolB DOE60_RS02135 IPR007195 TolB, N-terminal DOE60_RS02135 IPR036752 TolB, N-terminal domain superfamily DOE60_RS02140 IPR014161 Tol-Pal system, TolA DOE60_RS02145 IPR014168 Tol-Pal system protein TolR DOE60_RS02145 IPR003400 Biopolymer transport protein ExbD/TolR DOE60_RS02150 IPR014163 Tol-Pal system, TolQ DOE60_RS02150 IPR002898 MotA/TolQ/ExbB proton channel DOE60_RS02155 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site DOE60_RS02155 IPR029069 HotDog domain superfamily DOE60_RS02155 IPR006683 Thioesterase domain DOE60_RS02155 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DOE60_RS02155 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOE60_RS02160 IPR011846 Cyd operon protein YbgE DOE60_RS02170 IPR011724 Cyd operon protein YbgT DOE60_RS02170 IPR012994 Membrane bound YbgT-like DOE60_RS02175 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE60_RS02180 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE60_RS02190 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOE60_RS02190 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DOE60_RS02190 IPR003781 CoA-binding DOE60_RS02190 IPR005810 Succinyl-CoA ligase, alpha subunit DOE60_RS02190 IPR036291 NAD(P)-binding domain superfamily DOE60_RS02190 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DOE60_RS02190 IPR016102 Succinyl-CoA synthetase-like DOE60_RS02195 IPR016102 Succinyl-CoA synthetase-like DOE60_RS02195 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DOE60_RS02195 IPR005809 Succinate--CoA synthetase, beta subunit DOE60_RS02195 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DOE60_RS02195 IPR011761 ATP-grasp fold DOE60_RS02195 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOE60_RS02195 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS02200 IPR000089 Biotin/lipoyl attachment DOE60_RS02200 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE60_RS02200 IPR036625 E3-binding domain superfamily DOE60_RS02200 IPR004167 Peripheral subunit-binding domain DOE60_RS02200 IPR011053 Single hybrid motif DOE60_RS02200 IPR006255 Dihydrolipoamide succinyltransferase DOE60_RS02200 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE60_RS02200 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOE60_RS02205 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal DOE60_RS02205 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain DOE60_RS02205 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily DOE60_RS02205 IPR029061 Thiamin diphosphate-binding fold DOE60_RS02205 IPR005475 Transketolase-like, pyrimidine-binding domain DOE60_RS02205 IPR001017 Dehydrogenase, E1 component DOE60_RS02205 IPR011603 2-oxoglutarate dehydrogenase E1 component DOE60_RS02210 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DOE60_RS02210 IPR009051 Alpha-helical ferredoxin DOE60_RS02210 IPR012675 Beta-grasp domain superfamily DOE60_RS02210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS02210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS02210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS02210 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS02210 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DOE60_RS02215 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE60_RS02215 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS02215 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DOE60_RS02215 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE60_RS02215 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DOE60_RS02215 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE60_RS02215 IPR011281 Succinate dehydrogenase, flavoprotein subunit DOE60_RS02215 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE60_RS02220 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE60_RS02220 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOE60_RS02220 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor DOE60_RS02225 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOE60_RS02225 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site DOE60_RS02225 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE60_RS02225 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit DOE60_RS02240 IPR024176 Citrate synthase, bacterial-type DOE60_RS02240 IPR002020 Citrate synthase DOE60_RS02240 IPR019810 Citrate synthase active site DOE60_RS02240 IPR016142 Citrate synthase-like, large alpha subdomain DOE60_RS02240 IPR016143 Citrate synthase-like, small alpha subdomain DOE60_RS02240 IPR010953 Citrate synthase, type I DOE60_RS02240 IPR036969 Citrate synthase superfamily DOE60_RS02245 IPR017516 AbrB duplication DOE60_RS02245 IPR007820 AbrB family DOE60_RS02250 IPR035937 MutM-like, N-terminal DOE60_RS02250 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DOE60_RS02250 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DOE60_RS02250 IPR010663 Zinc finger, FPG/IleRS-type DOE60_RS02250 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DOE60_RS02250 IPR023713 Endonuclease VIII DOE60_RS02250 IPR010979 Ribosomal protein S13-like, H2TH DOE60_RS02250 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DOE60_RS02260 IPR001296 Glycosyl transferase, family 1 DOE60_RS02260 IPR017814 Mycothiol biosynthesis protein, MshA DOE60_RS02260 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS02265 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS02265 IPR001296 Glycosyl transferase, family 1 DOE60_RS02275 IPR003593 AAA+ ATPase domain DOE60_RS02275 IPR003439 ABC transporter-like DOE60_RS02275 IPR017871 ABC transporter, conserved site DOE60_RS02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02290 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DOE60_RS02290 IPR011051 RmlC-like cupin domain superfamily DOE60_RS02290 IPR014710 RmlC-like jelly roll fold DOE60_RS02290 IPR005835 Nucleotidyl transferase domain DOE60_RS02290 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS02290 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DOE60_RS02310 IPR002104 Integrase, catalytic domain DOE60_RS02310 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS02310 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS02320 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS02320 IPR005501 LamB/YcsF/PxpA-like DOE60_RS02325 IPR029000 Cyclophilin-like domain superfamily DOE60_RS02325 IPR003778 Carboxyltransferase domain, subdomain A and B DOE60_RS02330 IPR003833 Carboxyltransferase domain, subdomain C and D DOE60_RS02330 IPR029000 Cyclophilin-like domain superfamily DOE60_RS02330 IPR010016 KipI family DOE60_RS02335 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DOE60_RS02335 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DOE60_RS02345 IPR020846 Major facilitator superfamily domain DOE60_RS02345 IPR036259 MFS transporter superfamily DOE60_RS02345 IPR000109 Proton-dependent oligopeptide transporter family DOE60_RS02345 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE60_RS02345 IPR023777 Amino acid/peptide transporter family, dipeptide permease D DOE60_RS02345 IPR005279 Dipeptide/tripeptide permease DOE60_RS02365 IPR003615 HNH nuclease DOE60_RS02365 IPR008514 Type VI secretion system effector, Hcp DOE60_RS02365 IPR036624 Hcp1-like superfamily DOE60_RS02370 IPR019663 Uncharacterised protein YbfA DOE60_RS02375 IPR011726 K+ transporting P-type ATPase, F subunit DOE60_RS02380 IPR004623 Potassium-transporting ATPase A chain DOE60_RS02385 IPR036412 HAD-like superfamily DOE60_RS02385 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS02385 IPR018303 P-type ATPase, phosphorylation site DOE60_RS02385 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS02385 IPR008250 P-type ATPase, A domain superfamily DOE60_RS02385 IPR006391 P-type ATPase, B chain, subfamily IA DOE60_RS02385 IPR001757 P-type ATPase DOE60_RS02390 IPR003820 Potassium-transporting ATPase C chain DOE60_RS02395 IPR003018 GAF domain DOE60_RS02395 IPR029016 GAF-like domain superfamily DOE60_RS02395 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS02395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS02395 IPR025201 Sensor protein KdpD, transmembrane domain DOE60_RS02395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS02395 IPR038318 KdpD, transmembrane domain superfamily DOE60_RS02395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS02395 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DOE60_RS02395 IPR005467 Histidine kinase domain DOE60_RS02395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS02400 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02400 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS02400 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS02400 IPR011006 CheY-like superfamily DOE60_RS02400 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS02405 IPR021237 Protein of unknown function DUF2618 DOE60_RS02410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS02410 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE60_RS02410 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE60_RS02410 IPR027464 Ornithine decarboxylase, N-terminal DOE60_RS02410 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE60_RS02410 IPR011193 Ornithine/lysine/arginine decarboxylase DOE60_RS02410 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE60_RS02410 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS02410 IPR027568 Ornithine decarboxylase SpeF DOE60_RS02410 IPR011006 CheY-like superfamily DOE60_RS02410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS02415 IPR027566 Putrescine transporter PotE DOE60_RS02415 IPR004754 Amino acid antiporter DOE60_RS02415 IPR002293 Amino acid/polyamine transporter I DOE60_RS02425 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE60_RS02425 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE60_RS02425 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE60_RS02425 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE60_RS02425 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE60_RS02425 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE60_RS02425 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE60_RS02425 IPR005852 Phosphoglucomutase, alpha-D-glucose specific DOE60_RS02430 IPR005621 Negative modulator of initiation of replication SeqA DOE60_RS02430 IPR010985 Ribbon-helix-helix DOE60_RS02430 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily DOE60_RS02430 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain DOE60_RS02430 IPR013321 Arc-type ribbon-helix-helix DOE60_RS02430 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal DOE60_RS02435 IPR029058 Alpha/Beta hydrolase fold DOE60_RS02435 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS02440 IPR002145 Ribbon-helix-helix protein, CopG DOE60_RS02440 IPR010985 Ribbon-helix-helix DOE60_RS02445 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS02445 IPR001226 Flavodoxin, conserved site DOE60_RS02445 IPR010086 Flavodoxin, long chain DOE60_RS02445 IPR029039 Flavoprotein-like superfamily DOE60_RS02450 IPR002481 Ferric-uptake regulator DOE60_RS02450 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02450 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02455 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02455 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02455 IPR000847 Transcription regulator HTH, LysR DOE60_RS02455 IPR005119 LysR, substrate-binding DOE60_RS02460 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE60_RS02460 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS02460 IPR012286 Tetrahaem cytochrome domain DOE60_RS02460 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE60_RS02460 IPR036280 Multiheme cytochrome superfamily DOE60_RS02460 IPR011031 Multihaem cytochrome DOE60_RS02460 IPR010960 Flavocytochrome c DOE60_RS02465 IPR036197 NarG-like superfamily DOE60_RS02465 IPR012830 Citrate utilization protein B DOE60_RS02470 IPR011701 Major facilitator superfamily DOE60_RS02470 IPR020846 Major facilitator superfamily domain DOE60_RS02470 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS02470 IPR005829 Sugar transporter, conserved site DOE60_RS02470 IPR036259 MFS transporter superfamily DOE60_RS02475 IPR025727 YbfN-like lipoprotein DOE60_RS02480 IPR005318 Outer membrane porin, bacterial DOE60_RS02480 IPR023614 Porin domain superfamily DOE60_RS02495 IPR004514 Glutamine-tRNA synthetase DOE60_RS02495 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily DOE60_RS02495 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain DOE60_RS02495 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE60_RS02495 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE60_RS02495 IPR022861 Glutamine-tRNA ligase, bacterial DOE60_RS02495 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOE60_RS02495 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOE60_RS02495 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS02495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02510 IPR004547 Glucosamine-6-phosphate isomerase DOE60_RS02510 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DOE60_RS02510 IPR018321 Glucosamine-6-phosphate isomerase, conserved site DOE60_RS02510 IPR037171 NagB/RpiA transferase-like DOE60_RS02515 IPR032466 Metal-dependent hydrolase DOE60_RS02515 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS02515 IPR003764 N-acetylglucosamine-6-phosphate deacetylase DOE60_RS02515 IPR006680 Amidohydrolase-related DOE60_RS02520 IPR000835 MarR-type HTH domain DOE60_RS02520 IPR000600 ROK family DOE60_RS02520 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02520 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02525 IPR036412 HAD-like superfamily DOE60_RS02525 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOE60_RS02525 IPR023214 HAD superfamily DOE60_RS02530 IPR006426 Asparagine synthase, glutamine-hydrolyzing DOE60_RS02530 IPR033738 Asparagine synthase, N-terminal domain DOE60_RS02530 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS02530 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS02530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02530 IPR001962 Asparagine synthase DOE60_RS02575 IPR002938 FAD-binding domain DOE60_RS02575 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS02575 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE60_RS02575 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE60_RS02580 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE60_RS02580 IPR013848 Methylthiotransferase, N-terminal DOE60_RS02580 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS02580 IPR007197 Radical SAM DOE60_RS02580 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB DOE60_RS02580 IPR006638 Elp3/MiaB/NifB DOE60_RS02580 IPR002792 TRAM domain DOE60_RS02580 IPR020612 Methylthiotransferase, conserved site DOE60_RS02580 IPR005839 Methylthiotransferase DOE60_RS02585 IPR003714 PhoH-like protein DOE60_RS02585 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02590 IPR002036 Endoribonuclease YbeY DOE60_RS02590 IPR020549 Endoribonuclease YbeY, conserved site DOE60_RS02590 IPR023091 Metalloprotease catalytic domain superfamily, predicted DOE60_RS02595 IPR005170 Transporter-associated domain DOE60_RS02595 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS02595 IPR000644 CBS domain DOE60_RS02595 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS02600 IPR003010 Carbon-nitrogen hydrolase DOE60_RS02600 IPR036526 Carbon-nitrogen hydrolase superfamily DOE60_RS02600 IPR004563 Apolipoprotein N-acyltransferase DOE60_RS02605 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS02610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS02610 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ DOE60_RS02610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS02610 IPR035906 MetI-like superfamily DOE60_RS02615 IPR035906 MetI-like superfamily DOE60_RS02615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS02615 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS02615 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM DOE60_RS02620 IPR003439 ABC transporter-like DOE60_RS02620 IPR017871 ABC transporter, conserved site DOE60_RS02620 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS02620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02620 IPR003593 AAA+ ATPase domain DOE60_RS02625 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site DOE60_RS02625 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA DOE60_RS02625 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOE60_RS02625 IPR036452 Ribonucleoside hydrolase-like DOE60_RS02625 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOE60_RS02630 IPR009912 Zinc-ribbon containing domain DOE60_RS02640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS02640 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE60_RS02640 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE60_RS02640 IPR002302 Leucine-tRNA ligase DOE60_RS02640 IPR025709 Leucyl-tRNA synthetase, editing domain DOE60_RS02640 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE60_RS02640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02640 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS02645 IPR007485 LPS-assembly lipoprotein LptE DOE60_RS02650 IPR032780 DNA polymerase III subunit delta, C-terminal DOE60_RS02650 IPR010372 DNA polymerase III delta, N-terminal DOE60_RS02650 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02650 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE60_RS02650 IPR005790 DNA polymerase III, delta subunit DOE60_RS02655 IPR004821 Cytidyltransferase-like domain DOE60_RS02655 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase DOE60_RS02655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS02660 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS02660 IPR005860 L-threonine-O-3-phosphate decarboxylase DOE60_RS02660 IPR004839 Aminotransferase, class I/classII DOE60_RS02660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS02660 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE60_RS02665 IPR013078 Histidine phosphatase superfamily, clade-1 DOE60_RS02665 IPR029033 Histidine phosphatase superfamily DOE60_RS02665 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE60_RS02665 IPR017578 Alpha-ribazole phosphatase, CobC DOE60_RS02670 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DOE60_RS02675 IPR003742 RNA methyltransferase RlmH DOE60_RS02675 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS02675 IPR029028 Alpha/beta knot methyltransferases DOE60_RS02680 IPR017790 Penicillin-binding protein 2 DOE60_RS02680 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE60_RS02680 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS02680 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS02680 IPR005311 Penicillin-binding protein, dimerisation domain DOE60_RS02685 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DOE60_RS02685 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB DOE60_RS02685 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOE60_RS02690 IPR036908 RlpA-like domain superfamily DOE60_RS02690 IPR007730 Sporulation-like domain DOE60_RS02690 IPR012997 Rare lipoprotein A DOE60_RS02690 IPR009009 RlpA-like protein, double-psi beta-barrel domain DOE60_RS02690 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DOE60_RS02690 IPR036680 Sporulation-like domain superfamily DOE60_RS02695 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE60_RS02695 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE60_RS02695 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE60_RS02695 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE60_RS02695 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS02695 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE60_RS02700 IPR007454 Uncharacterised protein family UPF0250 DOE60_RS02700 IPR027471 YbeD-like domain superfamily DOE60_RS02705 IPR020605 Octanoyltransferase, conserved site DOE60_RS02705 IPR000544 Octanoyltransferase DOE60_RS02705 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE60_RS02710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02710 IPR005119 LysR, substrate-binding DOE60_RS02710 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02710 IPR000847 Transcription regulator HTH, LysR DOE60_RS02715 IPR003698 Lipoyl synthase DOE60_RS02715 IPR013785 Aldolase-type TIM barrel DOE60_RS02715 IPR006638 Elp3/MiaB/NifB DOE60_RS02715 IPR031691 Lipoyl synthase, N-terminal DOE60_RS02715 IPR007197 Radical SAM DOE60_RS02720 IPR006312 Sec-independent protein translocase protein TatA/E DOE60_RS02720 IPR024905 Sec-independent protein translocase protein TatE DOE60_RS02720 IPR003369 Sec-independent protein translocase protein TatA/B/E DOE60_RS02725 IPR001110 Uncharacterised protein family UPF0012, conserved site DOE60_RS02725 IPR036526 Carbon-nitrogen hydrolase superfamily DOE60_RS02725 IPR003010 Carbon-nitrogen hydrolase DOE60_RS02730 IPR003691 Putative fluoride ion transporter CrcB DOE60_RS02735 IPR002059 Cold-shock protein, DNA-binding DOE60_RS02735 IPR019844 Cold-shock (CSD) domain DOE60_RS02735 IPR011129 Cold shock domain DOE60_RS02735 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS02735 IPR012156 Cold shock, CspA DOE60_RS02740 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS02740 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP DOE60_RS02745 IPR004669 C4-dicarboxylate anaerobic carrier DOE60_RS02745 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE60_RS02750 IPR028141 Transcriptional regulator DOE60_RS02750 IPR024187 Signal transduction response regulator, citrate/malate metabolism DOE60_RS02750 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS02750 IPR011006 CheY-like superfamily DOE60_RS02765 IPR005216 Citrate lyase ligase DOE60_RS02765 IPR013166 Citrate lyase ligase, C-terminal DOE60_RS02765 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS02765 IPR000182 GNAT domain DOE60_RS02765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02765 IPR004821 Cytidyltransferase-like domain DOE60_RS02770 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DOE60_RS02770 IPR006495 Citrate lyase acyl carrier protein CitD DOE60_RS02775 IPR011206 Citrate lyase beta subunit-like DOE60_RS02775 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE60_RS02775 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS02775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS02775 IPR006475 Citrate lyase, beta subunit, bacteria DOE60_RS02780 IPR037171 NagB/RpiA transferase-like DOE60_RS02780 IPR006472 Citrate lyase, alpha subunit DOE60_RS02785 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DOE60_RS02790 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG DOE60_RS02790 IPR002736 Triphosphoribosyl-dephospho-CoA protein DOE60_RS02795 IPR001898 Solute carrier family 13 DOE60_RS02795 IPR030676 Citrate carrier CitT-related DOE60_RS02800 IPR036430 Ribonuclease T2-like superfamily DOE60_RS02800 IPR018188 Ribonuclease T2, His active site 1 DOE60_RS02800 IPR033130 Ribonuclease T2, His active site 2 DOE60_RS02800 IPR001568 Ribonuclease T2-like DOE60_RS02800 IPR039378 Ribonuclease T2, prokaryotic DOE60_RS02810 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE60_RS02810 IPR028625 Regulator of nucleoside diphosphate kinase DOE60_RS02810 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain DOE60_RS02810 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE60_RS02810 IPR023459 Transcription elongation factor GreA/GreB family DOE60_RS02815 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS02815 IPR027399 Alcohol dehydrogenase GroES-associated DOE60_RS02815 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS02815 IPR011032 GroES-like superfamily DOE60_RS02815 IPR036291 NAD(P)-binding domain superfamily DOE60_RS02815 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS02820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02820 IPR006015 Universal stress protein A family DOE60_RS02820 IPR006016 UspA DOE60_RS02830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS02830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS02830 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS02835 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS02835 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS02835 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS02835 IPR006656 Molybdopterin oxidoreductase DOE60_RS02835 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS02835 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS02845 IPR012336 Thioredoxin-like fold DOE60_RS02845 IPR012081 Alkyl hydroperoxide reductase subunit F DOE60_RS02845 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS02845 IPR023753 FAD/NAD(P)-binding domain DOE60_RS02845 IPR002109 Glutaredoxin DOE60_RS02845 IPR036249 Thioredoxin-like superfamily DOE60_RS02845 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOE60_RS02850 IPR013766 Thioredoxin domain DOE60_RS02850 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE60_RS02850 IPR036249 Thioredoxin-like superfamily DOE60_RS02850 IPR024706 Peroxiredoxin, AhpC-type DOE60_RS02850 IPR017559 Alkyl hydroperoxide reductase subunit C DOE60_RS02850 IPR019479 Peroxiredoxin, C-terminal DOE60_RS02855 IPR033954 Disulphide bond isomerase, DsbC/G DOE60_RS02855 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DOE60_RS02855 IPR036249 Thioredoxin-like superfamily DOE60_RS02855 IPR012336 Thioredoxin-like fold DOE60_RS02865 IPR000847 Transcription regulator HTH, LysR DOE60_RS02865 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS02865 IPR005119 LysR, substrate-binding DOE60_RS02865 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS02870 IPR021845 Protein of unknown function DUF3440 DOE60_RS02870 IPR002500 Phosphoadenosine phosphosulphate reductase DOE60_RS02870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS02875 IPR003115 ParB/Sulfiredoxin DOE60_RS02875 IPR036086 ParB/Sulfiredoxin superfamily DOE60_RS02880 IPR004839 Aminotransferase, class I/classII DOE60_RS02880 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS02880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS02880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS02885 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS02885 IPR016205 Glycerol dehydrogenase DOE60_RS02885 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS02890 IPR007423 Selenoprotein, putative DOE60_RS02895 IPR003706 CstA, N-terminal domain DOE60_RS02895 IPR025299 CstA, C-terminal domain DOE60_RS02900 IPR006683 Thioesterase domain DOE60_RS02900 IPR026576 Proofreading thioesterase EntH DOE60_RS02900 IPR003736 Phenylacetic acid degradation-related domain DOE60_RS02900 IPR029069 HotDog domain superfamily DOE60_RS02905 IPR036291 NAD(P)-binding domain superfamily DOE60_RS02905 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase DOE60_RS02905 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS02905 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS02910 IPR016291 Isochorismatase DOE60_RS02910 IPR009081 Phosphopantetheine binding ACP domain DOE60_RS02910 IPR000868 Isochorismatase-like DOE60_RS02910 IPR036380 Isochorismatase-like superfamily DOE60_RS02910 IPR036736 ACP-like superfamily DOE60_RS02915 IPR011963 2,3-dihydroxybenzoate-AMP ligase DOE60_RS02915 IPR000873 AMP-dependent synthetase/ligase DOE60_RS02915 IPR020845 AMP-binding, conserved site DOE60_RS02915 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS02915 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS02920 IPR005801 ADC synthase DOE60_RS02920 IPR015890 Chorismate-utilising enzyme, C-terminal DOE60_RS02920 IPR004561 Isochorismate synthase DOE60_RS02925 IPR002491 ABC transporter periplasmic binding domain DOE60_RS02930 IPR010290 Transmembrane secretion effector DOE60_RS02930 IPR036259 MFS transporter superfamily DOE60_RS02930 IPR023722 Enterobactin exporter, EntS DOE60_RS02930 IPR020846 Major facilitator superfamily domain DOE60_RS02935 IPR037294 ABC transporter, BtuC-like DOE60_RS02935 IPR000522 ABC transporter, permease protein, BtuC-like DOE60_RS02940 IPR037294 ABC transporter, BtuC-like DOE60_RS02940 IPR000522 ABC transporter, permease protein, BtuC-like DOE60_RS02945 IPR003439 ABC transporter-like DOE60_RS02945 IPR003593 AAA+ ATPase domain DOE60_RS02945 IPR017871 ABC transporter, conserved site DOE60_RS02945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS02950 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE60_RS02955 IPR009081 Phosphopantetheine binding ACP domain DOE60_RS02955 IPR001242 Condensation domain DOE60_RS02955 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE60_RS02955 IPR000873 AMP-dependent synthetase/ligase DOE60_RS02955 IPR006162 Phosphopantetheine attachment site DOE60_RS02955 IPR001031 Thioesterase DOE60_RS02955 IPR020802 Polyketide synthase, thioesterase domain DOE60_RS02955 IPR010071 Amino acid adenylation domain DOE60_RS02955 IPR029058 Alpha/Beta hydrolase fold DOE60_RS02955 IPR036736 ACP-like superfamily DOE60_RS02955 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS02955 IPR020845 AMP-binding, conserved site DOE60_RS02955 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS02955 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOE60_RS02960 IPR005153 MbtH-like domain DOE60_RS02960 IPR038020 MbtH-like domain superfamily DOE60_RS02960 IPR037407 MbtH-like protein DOE60_RS02965 IPR014756 Immunoglobulin E-set DOE60_RS02965 IPR013783 Immunoglobulin-like fold DOE60_RS02965 IPR021764 Enterochelin esterase, N-terminal DOE60_RS02965 IPR029058 Alpha/Beta hydrolase fold DOE60_RS02965 IPR000801 Putative esterase DOE60_RS02970 IPR039426 Vitamin B12 transporter BtuB-like DOE60_RS02970 IPR012910 TonB-dependent receptor, plug domain DOE60_RS02970 IPR010105 TonB-dependent siderophore receptor DOE60_RS02970 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS02970 IPR010917 TonB-dependent receptor, conserved site DOE60_RS02970 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS02970 IPR010916 TonB box, conserved site DOE60_RS02970 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS02975 IPR003542 Enterobactin synthetase-like, component D DOE60_RS02975 IPR008278 4'-phosphopantetheinyl transferase domain DOE60_RS02975 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain DOE60_RS02975 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE60_RS02980 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE60_RS02980 IPR011793 Putative glutamate--cysteine ligase YbdK DOE60_RS02980 IPR006336 Glutamate--cysteine ligase, GCS2 DOE60_RS02985 IPR010590 Protein of unknown function DUF1158 DOE60_RS02990 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS02990 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS02990 IPR018062 HTH domain AraC-type, conserved site DOE60_RS02990 IPR009057 Homeobox-like domain superfamily DOE60_RS02995 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS02995 IPR009057 Homeobox-like domain superfamily DOE60_RS02995 IPR032551 HTH-type transcriptional repressor, C-terminal DOE60_RS02995 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS02995 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS03000 IPR007351 Uncharacterised protein YjbR DOE60_RS03000 IPR038056 YjbR-like superfamily DOE60_RS03005 IPR000415 Nitroreductase-like DOE60_RS03005 IPR029479 Nitroreductase DOE60_RS03005 IPR033878 Nitroreductase NfsB-like DOE60_RS03015 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE60_RS03015 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE60_RS03025 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE60_RS03035 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 DOE60_RS03035 IPR024713 Fructosamine deglycase FrlB DOE60_RS03035 IPR035490 GlmS/FrlB, SIS domain 2 DOE60_RS03035 IPR001347 Sugar isomerase (SIS) DOE60_RS03040 IPR011608 PRD domain DOE60_RS03040 IPR036634 PRD domain superfamily DOE60_RS03040 IPR001550 Transcription antiterminator, conserved site DOE60_RS03040 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS03040 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS03040 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS03040 IPR003593 AAA+ ATPase domain DOE60_RS03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03040 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS03040 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS03040 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE60_RS03045 IPR006315 Outer membrane autotransporter barrel DOE60_RS03045 IPR017186 Lipase, autotransporter EstA DOE60_RS03045 IPR001087 GDSL lipase/esterase DOE60_RS03045 IPR036709 Autotransporter beta-domain superfamily DOE60_RS03045 IPR036514 SGNH hydrolase superfamily DOE60_RS03045 IPR005546 Autotransporter beta-domain DOE60_RS03045 IPR008265 Lipase, GDSL, active site DOE60_RS03055 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS03055 IPR006685 Mechanosensitive ion channel MscS DOE60_RS03055 IPR010920 LSM domain superfamily DOE60_RS03055 IPR030192 Miniconductance mechanosensitive channel YbdG DOE60_RS03060 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS03060 IPR004840 Amino acid permease, conserved site DOE60_RS03070 IPR007339 Inner membrane protein RclC-like DOE60_RS03070 IPR016865 Inner membrane protein RclC DOE60_RS03075 IPR025543 Dodecin-like DOE60_RS03075 IPR010854 Domain of unknown function DUF1471 DOE60_RS03075 IPR036275 YdgH-like superfamily DOE60_RS03080 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE60_RS03080 IPR023753 FAD/NAD(P)-binding domain DOE60_RS03080 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE60_RS03080 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE60_RS03080 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS03080 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE60_RS03085 IPR009057 Homeobox-like domain superfamily DOE60_RS03085 IPR011051 RmlC-like cupin domain superfamily DOE60_RS03085 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS03085 IPR032783 AraC-type transcription regulator, ligand-binding domain DOE60_RS03085 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS03090 IPR001036 Acriflavin resistance protein DOE60_RS03090 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS03090 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DOE60_RS03095 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS03095 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS03100 IPR021647 Copper binding periplasmic protein CusF DOE60_RS03105 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE60_RS03105 IPR003423 Outer membrane efflux protein DOE60_RS03110 IPR011006 CheY-like superfamily DOE60_RS03110 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS03110 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS03110 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS03110 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS03110 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DOE60_RS03110 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS03115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS03115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS03115 IPR005467 Histidine kinase domain DOE60_RS03115 IPR003660 HAMP domain DOE60_RS03115 IPR006290 Heavy metal sensor kinase DOE60_RS03115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS03115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS03115 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS03135 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS03135 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS03135 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS03150 IPR011006 CheY-like superfamily DOE60_RS03150 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS03150 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS03150 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS03155 IPR000259 Fimbrial-type adhesion domain DOE60_RS03155 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS03155 IPR008966 Adhesion domain superfamily DOE60_RS03160 IPR008966 Adhesion domain superfamily DOE60_RS03160 IPR000259 Fimbrial-type adhesion domain DOE60_RS03160 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS03165 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS03165 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS03165 IPR025949 PapC-like, C-terminal domain DOE60_RS03165 IPR025885 PapC, N-terminal domain DOE60_RS03165 IPR000015 Outer membrane usher protein DOE60_RS03165 IPR037224 PapC, N-terminal domain superfamily DOE60_RS03170 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS03170 IPR008962 PapD-like superfamily DOE60_RS03170 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS03170 IPR001829 Pili assembly chaperone, bacterial DOE60_RS03170 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS03170 IPR013783 Immunoglobulin-like fold DOE60_RS03170 IPR018046 Pili assembly chaperone, conserved site DOE60_RS03175 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS03175 IPR008966 Adhesion domain superfamily DOE60_RS03180 IPR008966 Adhesion domain superfamily DOE60_RS03180 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS03180 IPR000259 Fimbrial-type adhesion domain DOE60_RS03190 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOE60_RS03190 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DOE60_RS03190 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOE60_RS03190 IPR036291 NAD(P)-binding domain superfamily DOE60_RS03190 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DOE60_RS03195 IPR002942 RNA-binding S4 domain DOE60_RS03195 IPR036986 RNA-binding S4 domain superfamily DOE60_RS03200 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE60_RS03205 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS03205 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DOE60_RS03205 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DOE60_RS03205 IPR015803 Cysteine-tRNA ligase DOE60_RS03205 IPR032678 tRNA synthetases class I, catalytic domain DOE60_RS03205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS03210 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS03210 IPR029000 Cyclophilin-like domain superfamily DOE60_RS03210 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DOE60_RS03210 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOE60_RS03215 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type DOE60_RS03215 IPR010138 UDP-2,3-diacylglucosamine hydrolase DOE60_RS03230 IPR011054 Rudiment single hybrid motif DOE60_RS03230 IPR011761 ATP-grasp fold DOE60_RS03230 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOE60_RS03230 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS03230 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS03230 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit DOE60_RS03230 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain DOE60_RS03235 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase DOE60_RS03235 IPR036873 Rhodanese-like domain superfamily DOE60_RS03235 IPR001763 Rhodanese-like domain DOE60_RS03240 IPR035906 MetI-like superfamily DOE60_RS03240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS03245 IPR017871 ABC transporter, conserved site DOE60_RS03245 IPR003593 AAA+ ATPase domain DOE60_RS03245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03245 IPR018449 NIL domain DOE60_RS03245 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DOE60_RS03245 IPR026253 Methionine import ATP-binding protein MetN DOE60_RS03245 IPR003439 ABC transporter-like DOE60_RS03245 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DOE60_RS03250 IPR004872 Lipoprotein NlpA family DOE60_RS03260 IPR038766 Membrane component of ABC transporter, predicted DOE60_RS03265 IPR003593 AAA+ ATPase domain DOE60_RS03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03265 IPR017871 ABC transporter, conserved site DOE60_RS03265 IPR003439 ABC transporter-like DOE60_RS03270 IPR008265 Lipase, GDSL, active site DOE60_RS03270 IPR013830 SGNH hydrolase-type esterase domain DOE60_RS03270 IPR036514 SGNH hydrolase superfamily DOE60_RS03275 IPR036291 NAD(P)-binding domain superfamily DOE60_RS03275 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS03275 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS03280 IPR013766 Thioredoxin domain DOE60_RS03280 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS03280 IPR036249 Thioredoxin-like superfamily DOE60_RS03285 IPR005226 UPF0014 family DOE60_RS03290 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03290 IPR017871 ABC transporter, conserved site DOE60_RS03290 IPR003439 ABC transporter-like DOE60_RS03290 IPR003593 AAA+ ATPase domain DOE60_RS03295 IPR018080 Band 7/stomatin-like, conserved site DOE60_RS03295 IPR032435 Band 7, C-terminal extension DOE60_RS03295 IPR036013 Band 7/SPFH domain superfamily DOE60_RS03295 IPR001107 Band 7 domain DOE60_RS03295 IPR001972 Stomatin family DOE60_RS03300 IPR002810 NfeD-like, C-terminal domain DOE60_RS03305 IPR011789 Cu(I)-responsive transcriptional regulator DOE60_RS03305 IPR009061 Putative DNA-binding domain superfamily DOE60_RS03305 IPR000551 MerR-type HTH domain DOE60_RS03310 IPR006121 Heavy metal-associated domain, HMA DOE60_RS03310 IPR023214 HAD superfamily DOE60_RS03310 IPR036412 HAD-like superfamily DOE60_RS03310 IPR036163 Heavy metal-associated domain superfamily DOE60_RS03310 IPR027256 P-type ATPase, subfamily IB DOE60_RS03310 IPR017969 Heavy-metal-associated, conserved site DOE60_RS03310 IPR008250 P-type ATPase, A domain superfamily DOE60_RS03310 IPR001757 P-type ATPase DOE60_RS03310 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS03310 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS03310 IPR018303 P-type ATPase, phosphorylation site DOE60_RS03320 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DOE60_RS03320 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE60_RS03320 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE60_RS03325 IPR029052 Metallo-dependent phosphatase-like DOE60_RS03325 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS03325 IPR006146 5'-Nucleotidase, conserved site DOE60_RS03325 IPR006179 5'-Nucleotidase/apyrase DOE60_RS03325 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE60_RS03325 IPR008334 5'-Nucleotidase, C-terminal DOE60_RS03330 IPR036259 MFS transporter superfamily DOE60_RS03330 IPR020846 Major facilitator superfamily domain DOE60_RS03330 IPR011701 Major facilitator superfamily DOE60_RS03335 IPR006153 Cation/H+ exchanger DOE60_RS03335 IPR004771 K+/H+ exchanger DOE60_RS03335 IPR038770 Sodium/solute symporter superfamily DOE60_RS03335 IPR003148 Regulator of K+ conductance, N-terminal DOE60_RS03335 IPR036291 NAD(P)-binding domain superfamily DOE60_RS03340 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS03340 IPR029056 Ribokinase-like DOE60_RS03340 IPR011611 Carbohydrate kinase PfkB DOE60_RS03345 IPR033140 Lipase, GDXG, putative serine active site DOE60_RS03345 IPR013094 Alpha/beta hydrolase fold-3 DOE60_RS03345 IPR023508 Acetyl esterase DOE60_RS03345 IPR029058 Alpha/Beta hydrolase fold DOE60_RS03350 IPR001015 Ferrochelatase DOE60_RS03350 IPR019772 Ferrochelatase, active site DOE60_RS03350 IPR033644 Ferrochelatase, C-terminal DOE60_RS03350 IPR033659 Ferrochelatase, N-terminal DOE60_RS03355 IPR007862 Adenylate kinase, active site lid domain DOE60_RS03355 IPR033690 Adenylate kinase, conserved site DOE60_RS03355 IPR000850 Adenylate kinase/UMP-CMP kinase DOE60_RS03355 IPR006259 Adenylate kinase subfamily DOE60_RS03355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03370 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS03370 IPR020575 Heat shock protein Hsp90, N-terminal DOE60_RS03370 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS03370 IPR001404 Heat shock protein Hsp90 family DOE60_RS03370 IPR037196 HSP90, C-terminal domain DOE60_RS03370 IPR019805 Heat shock protein Hsp90, conserved site DOE60_RS03370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS03375 IPR000093 DNA recombination protein RecR DOE60_RS03375 IPR023627 Recombination protein RecR DOE60_RS03375 IPR023628 Recombination protein RecR, C4-type zinc finger DOE60_RS03375 IPR015967 Recombination protein RecR, conserved site DOE60_RS03375 IPR034137 RecR, TOPRIM domain DOE60_RS03375 IPR006171 TOPRIM domain DOE60_RS03380 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE60_RS03380 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DOE60_RS03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03385 IPR021029 DNA polymerase III, tau subunit, domain V DOE60_RS03385 IPR012763 DNA polymerase III, subunit gamma/ tau DOE60_RS03385 IPR022754 DNA polymerase III, gamma subunit, domain III DOE60_RS03385 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV DOE60_RS03385 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE60_RS03385 IPR001270 ClpA/B family DOE60_RS03385 IPR003593 AAA+ ATPase domain DOE60_RS03385 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily DOE60_RS03390 IPR000836 Phosphoribosyltransferase domain DOE60_RS03390 IPR029057 Phosphoribosyltransferase-like DOE60_RS03390 IPR005764 Adenine phosphoribosyl transferase DOE60_RS03400 IPR007401 Protein of unknown function DUF454 DOE60_RS03405 IPR038338 PriB/PriC superfamily DOE60_RS03405 IPR010890 Primosomal replication PriB/PriC DOE60_RS03410 IPR019630 Protein of unknown function DUF2496, YbaM-related DOE60_RS03425 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DOE60_RS03425 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE60_RS03425 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS03425 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS03425 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS03425 IPR010920 LSM domain superfamily DOE60_RS03425 IPR006685 Mechanosensitive ion channel MscS DOE60_RS03425 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS03425 IPR024393 Mechanosensitive ion channel MscS, porin domain DOE60_RS03430 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS03430 IPR009057 Homeobox-like domain superfamily DOE60_RS03430 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS03430 IPR013572 Transcription regulator MAATS, C-terminal DOE60_RS03430 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS03435 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS03435 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS03440 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS03440 IPR001036 Acriflavin resistance protein DOE60_RS03440 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE60_RS03445 IPR019693 Biofilm formation regulator YbaJ DOE60_RS03450 IPR036666 HHA superfamily DOE60_RS03450 IPR007985 Haemolysin expression modulating, HHA DOE60_RS03455 IPR011004 Trimeric LpxA-like superfamily DOE60_RS03455 IPR018357 Hexapeptide transferase, conserved site DOE60_RS03455 IPR001451 Hexapeptide repeat DOE60_RS03455 IPR024688 Maltose/galactoside acetyltransferase DOE60_RS03460 IPR019713 Inner membrane protein YlaC DOE60_RS03465 IPR000473 Ribosomal protein L36 DOE60_RS03465 IPR035977 Ribosomal protein L36 superfamily DOE60_RS03470 IPR027493 Ribosomal protein L31 type B DOE60_RS03470 IPR002150 Ribosomal protein L31 DOE60_RS03470 IPR042105 Ribosomal protein L31 superfamily DOE60_RS03470 IPR034704 L28p-like DOE60_RS03475 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE60_RS03475 IPR035919 EAL domain superfamily DOE60_RS03475 IPR001633 EAL domain DOE60_RS03490 IPR039366 YscW/ExsB DOE60_RS03495 IPR029069 HotDog domain superfamily DOE60_RS03495 IPR003703 Acyl-CoA thioesterase DOE60_RS03500 IPR024041 Ammonium transporter AmtB-like domain DOE60_RS03500 IPR018047 Ammonium transporter, conserved site DOE60_RS03500 IPR001905 Ammonium transporter DOE60_RS03500 IPR029020 Ammonium/urea transporter DOE60_RS03505 IPR002187 Nitrogen regulatory protein PII DOE60_RS03505 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE60_RS03505 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE60_RS03505 IPR017918 Nitrogen regulatory protein PII, conserved site DOE60_RS03505 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOE60_RS03510 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS03510 IPR003593 AAA+ ATPase domain DOE60_RS03510 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS03510 IPR017871 ABC transporter, conserved site DOE60_RS03510 IPR003439 ABC transporter-like DOE60_RS03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03510 IPR039421 Type I protein exporter DOE60_RS03515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03515 IPR003593 AAA+ ATPase domain DOE60_RS03515 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS03515 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS03515 IPR039421 Type I protein exporter DOE60_RS03515 IPR003439 ABC transporter-like DOE60_RS03515 IPR017871 ABC transporter, conserved site DOE60_RS03520 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE60_RS03520 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS03520 IPR019888 Transcription regulator AsnC-type DOE60_RS03520 IPR011008 Dimeric alpha-beta barrel DOE60_RS03520 IPR000485 AsnC-type HTH domain DOE60_RS03520 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS03520 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS03520 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE60_RS03530 IPR000150 Cof family DOE60_RS03530 IPR036412 HAD-like superfamily DOE60_RS03530 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS03530 IPR023938 HMP-PP phosphatase DOE60_RS03530 IPR023214 HAD superfamily DOE60_RS03535 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE60_RS03535 IPR039424 Solute-binding protein family 5 DOE60_RS03535 IPR000914 Solute-binding protein family 5 domain DOE60_RS03540 IPR018317 Queuosine biosynthesis protein QueC DOE60_RS03540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS03545 IPR029069 HotDog domain superfamily DOE60_RS03545 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOE60_RS03550 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DOE60_RS03550 IPR010994 RuvA domain 2-like DOE60_RS03550 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE60_RS03555 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE60_RS03555 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE60_RS03555 IPR027304 Trigger factor/SurA domain superfamily DOE60_RS03560 IPR000119 Histone-like DNA-binding protein DOE60_RS03560 IPR020816 Histone-like DNA-binding protein, conserved site DOE60_RS03560 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE60_RS03565 IPR027543 Lon protease, bacterial DOE60_RS03565 IPR004815 Lon protease, bacterial/eukaryotic-type DOE60_RS03565 IPR003111 Lon, substrate-binding domain DOE60_RS03565 IPR027065 Lon protease DOE60_RS03565 IPR008269 Peptidase S16, Lon proteolytic domain DOE60_RS03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03565 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS03565 IPR015947 PUA-like superfamily DOE60_RS03565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS03565 IPR008268 Peptidase S16, active site DOE60_RS03565 IPR003959 ATPase, AAA-type, core DOE60_RS03565 IPR003593 AAA+ ATPase domain DOE60_RS03570 IPR003593 AAA+ ATPase domain DOE60_RS03570 IPR003959 ATPase, AAA-type, core DOE60_RS03570 IPR019489 Clp ATPase, C-terminal DOE60_RS03570 IPR004487 Clp protease, ATP-binding subunit ClpX DOE60_RS03570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03570 IPR010603 Zinc finger, ClpX C4-type DOE60_RS03570 IPR038366 Zinc finger, ClpX C4-type superfamily DOE60_RS03575 IPR001907 ATP-dependent Clp protease proteolytic subunit DOE60_RS03575 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOE60_RS03575 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS03575 IPR033135 ClpP, histidine active site DOE60_RS03575 IPR018215 ClpP, Ser active site DOE60_RS03580 IPR036611 Trigger factor ribosome-binding domain superfamily DOE60_RS03580 IPR008881 Trigger factor, ribosome-binding, bacterial DOE60_RS03580 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS03580 IPR037041 Trigger factor, C-terminal domain superfamily DOE60_RS03580 IPR008880 Trigger factor, C-terminal DOE60_RS03580 IPR027304 Trigger factor/SurA domain superfamily DOE60_RS03580 IPR005215 Trigger factor DOE60_RS03595 IPR036065 BolA-like superfamily DOE60_RS03595 IPR002634 BolA protein DOE60_RS03600 IPR012640 Membrane lipoprotein, lipid attachment site DOE60_RS03600 IPR005619 Uncharacterised protein family, YajG DOE60_RS03605 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 DOE60_RS03605 IPR011701 Major facilitator superfamily DOE60_RS03605 IPR020846 Major facilitator superfamily domain DOE60_RS03605 IPR036259 MFS transporter superfamily DOE60_RS03610 IPR008972 Cupredoxin DOE60_RS03610 IPR006333 Cytochrome o ubiquinol oxidase subunit II DOE60_RS03610 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DOE60_RS03610 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain DOE60_RS03610 IPR010514 COX aromatic rich motif DOE60_RS03610 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DOE60_RS03610 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DOE60_RS03615 IPR023616 Cytochrome c oxidase-like, subunit I domain DOE60_RS03615 IPR014207 Cytochrome o ubiquinol oxidase, subunit I DOE60_RS03615 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DOE60_RS03615 IPR000883 Cytochrome c oxidase subunit I DOE60_RS03615 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DOE60_RS03620 IPR035973 Cytochrome c oxidase subunit III-like superfamily DOE60_RS03620 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DOE60_RS03620 IPR014206 Cytochrome o ubiquinol oxidase, subunit III DOE60_RS03620 IPR033946 Ubiquinol oxidase subunit III domain DOE60_RS03620 IPR024791 Cytochrome c oxidase subunit III DOE60_RS03620 IPR000298 Cytochrome c oxidase subunit III-like DOE60_RS03625 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DOE60_RS03625 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DOE60_RS03630 IPR030470 UbiA prenyltransferase conserved site DOE60_RS03630 IPR000537 UbiA prenyltransferase family DOE60_RS03630 IPR006369 Protohaem IX farnesyltransferase DOE60_RS03640 IPR011701 Major facilitator superfamily DOE60_RS03640 IPR020846 Major facilitator superfamily domain DOE60_RS03640 IPR036259 MFS transporter superfamily DOE60_RS03645 IPR007551 Protein of unknown function DUF520 DOE60_RS03645 IPR036183 YajQ-like superfamily DOE60_RS03645 IPR035570 UPF0234, N-terminal DOE60_RS03645 IPR035571 UPF0234-like, C-terminal DOE60_RS03650 IPR036291 NAD(P)-binding domain superfamily DOE60_RS03650 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS03650 IPR013752 Ketopantoate reductase, C-terminal domain DOE60_RS03650 IPR013332 Ketopantoate reductase, N-terminal domain DOE60_RS03650 IPR003710 Ketopantoate reductase ApbA/PanE DOE60_RS03650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS03655 IPR002818 DJ-1/PfpI DOE60_RS03655 IPR006287 Protein/nucleic acid deglycase DJ-1 DOE60_RS03655 IPR029062 Class I glutamine amidotransferase-like DOE60_RS03665 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS03665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS03665 IPR014297 Dimethylsulphoxide reductase, chain B DOE60_RS03670 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS03670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS03670 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS03670 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS03670 IPR037920 Probable oxidoreductase YoaE, C-terminal DOE60_RS03670 IPR006656 Molybdopterin oxidoreductase DOE60_RS03680 IPR001763 Rhodanese-like domain DOE60_RS03680 IPR036873 Rhodanese-like domain superfamily DOE60_RS03680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS03680 IPR003720 tRNA sulfurtransferase ThiI DOE60_RS03680 IPR004114 THUMP domain DOE60_RS03680 IPR026340 Thiazole biosynthesis domain DOE60_RS03680 IPR020536 Thil, AANH domain DOE60_RS03685 IPR037004 Exonuclease VII, small subunit superfamily DOE60_RS03685 IPR003761 Exonuclease VII, small subunit DOE60_RS03690 IPR033749 Polyprenyl synthetase, conserved site DOE60_RS03690 IPR000092 Polyprenyl synthetase DOE60_RS03690 IPR008949 Isoprenoid synthase domain superfamily DOE60_RS03695 IPR005474 Transketolase, N-terminal DOE60_RS03695 IPR033248 Transketolase, C-terminal domain DOE60_RS03695 IPR020826 Transketolase binding site DOE60_RS03695 IPR005475 Transketolase-like, pyrimidine-binding domain DOE60_RS03695 IPR029061 Thiamin diphosphate-binding fold DOE60_RS03695 IPR005477 Deoxyxylulose-5-phosphate synthase DOE60_RS03695 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS03700 IPR020471 Aldo/keto reductase DOE60_RS03700 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS03700 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS03705 IPR007686 YutG/PgpA domain DOE60_RS03705 IPR036681 PgpA-like superfamily DOE60_RS03705 IPR026037 Phosphatidylglycerophosphatase A DOE60_RS03710 IPR010918 PurM-like, C-terminal domain DOE60_RS03710 IPR036921 PurM-like, N-terminal domain superfamily DOE60_RS03710 IPR016188 PurM-like, N-terminal domain DOE60_RS03710 IPR006283 Thiamine-monophosphate kinase DOE60_RS03710 IPR036676 PurM-like, C-terminal domain superfamily DOE60_RS03715 IPR006027 NusB/RsmB/TIM44 DOE60_RS03715 IPR011605 NusB antitermination factor DOE60_RS03715 IPR035926 NusB-like superfamily DOE60_RS03720 IPR034964 Lumazine synthase DOE60_RS03720 IPR002180 Lumazine/riboflavin synthase DOE60_RS03720 IPR036467 Lumazine/riboflavin synthase superfamily DOE60_RS03725 IPR011549 Riboflavin-specific deaminase, C-terminal DOE60_RS03725 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE60_RS03725 IPR016193 Cytidine deaminase-like DOE60_RS03725 IPR024072 Dihydrofolate reductase-like domain superfamily DOE60_RS03725 IPR004794 Riboflavin biosynthesis protein RibD DOE60_RS03725 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DOE60_RS03725 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE60_RS03730 IPR003796 Ribonucleotide reductase regulator NrdR-like DOE60_RS03730 IPR005144 ATP-cone domain DOE60_RS03735 IPR037125 Lipoprotein YajI-like superfamily DOE60_RS03735 IPR021658 Domain of unknown function DUF3251 DOE60_RS03740 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily DOE60_RS03740 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like DOE60_RS03740 IPR003055 Nucleoside-specific channel-forming protein Tsx DOE60_RS03745 IPR002711 HNH endonuclease DOE60_RS03745 IPR003615 HNH nuclease DOE60_RS03750 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOE60_RS03750 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE60_RS03750 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE60_RS03750 IPR005665 Protein-export membrane protein SecF, bacterial DOE60_RS03755 IPR027398 SecD export protein N-terminal TM domain DOE60_RS03755 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE60_RS03755 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE60_RS03755 IPR005791 Protein translocase subunit SecD DOE60_RS03755 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOE60_RS03760 IPR003849 Preprotein translocase YajC DOE60_RS03765 IPR002616 tRNA-guanine(15) transglycosylase-like DOE60_RS03765 IPR036511 Queuine tRNA-ribosyltransferase-like DOE60_RS03765 IPR004803 tRNA-guanine transglycosylase DOE60_RS03775 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DOE60_RS03775 IPR042119 QueA, domain 2 DOE60_RS03775 IPR042118 QueA, domain 1 DOE60_RS03775 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DOE60_RS03780 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria DOE60_RS03780 IPR007431 Acyl carrier protein phosphodiesterase DOE60_RS03785 IPR013766 Thioredoxin domain DOE60_RS03785 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE60_RS03785 IPR024706 Peroxiredoxin, AhpC-type DOE60_RS03785 IPR019479 Peroxiredoxin, C-terminal DOE60_RS03785 IPR036249 Thioredoxin-like superfamily DOE60_RS03790 IPR017853 Glycoside hydrolase superfamily DOE60_RS03790 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS03790 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain DOE60_RS03790 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS03790 IPR017069 Maltodextrin glucosidase DOE60_RS03790 IPR014756 Immunoglobulin E-set DOE60_RS03795 IPR004840 Amino acid permease, conserved site DOE60_RS03795 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS03800 IPR004685 Branched-chain amino acid transport system II carrier protein DOE60_RS03805 IPR005467 Histidine kinase domain DOE60_RS03805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS03805 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR DOE60_RS03805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS03805 IPR021766 Phosphate regulon sensor protein PhoR DOE60_RS03805 IPR013767 PAS fold DOE60_RS03805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS03805 IPR035965 PAS domain superfamily DOE60_RS03805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS03805 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS03805 IPR000014 PAS domain DOE60_RS03810 IPR011006 CheY-like superfamily DOE60_RS03810 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS03810 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS03810 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS03810 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS03810 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DOE60_RS03815 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain DOE60_RS03815 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS03815 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DOE60_RS03815 IPR029052 Metallo-dependent phosphatase-like DOE60_RS03815 IPR004593 Nuclease SbcCD subunit D DOE60_RS03820 IPR004592 Nuclease SbcC, gammaproteobacteria type DOE60_RS03820 IPR038729 Rad50/SbcC-type AAA domain DOE60_RS03820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03825 IPR000259 Fimbrial-type adhesion domain DOE60_RS03825 IPR008966 Adhesion domain superfamily DOE60_RS03825 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS03830 IPR025885 PapC, N-terminal domain DOE60_RS03830 IPR025949 PapC-like, C-terminal domain DOE60_RS03830 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS03830 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS03830 IPR000015 Outer membrane usher protein DOE60_RS03830 IPR037224 PapC, N-terminal domain superfamily DOE60_RS03835 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS03835 IPR013783 Immunoglobulin-like fold DOE60_RS03835 IPR008962 PapD-like superfamily DOE60_RS03835 IPR001829 Pili assembly chaperone, bacterial DOE60_RS03835 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS03835 IPR018046 Pili assembly chaperone, conserved site DOE60_RS03835 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS03845 IPR011701 Major facilitator superfamily DOE60_RS03845 IPR036259 MFS transporter superfamily DOE60_RS03845 IPR020846 Major facilitator superfamily domain DOE60_RS03850 IPR000600 ROK family DOE60_RS03855 IPR007476 Putative exonuclease, RdgC DOE60_RS03860 IPR011051 RmlC-like cupin domain superfamily DOE60_RS03860 IPR014710 RmlC-like jelly roll fold DOE60_RS03860 IPR009664 Pyrimidine/purine nucleoside phosphorylase DOE60_RS03865 IPR010843 Uncharacterised protein family AroM DOE60_RS03870 IPR032303 YaiA protein DOE60_RS03870 IPR038462 YaiA-like superfamily DOE60_RS03875 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03875 IPR031322 Shikimate kinase/gluconokinase DOE60_RS03875 IPR023000 Shikimate kinase, conserved site DOE60_RS03875 IPR000623 Shikimate kinase/Threonine synthase-like 1 DOE60_RS03875 IPR027544 Shikimate kinase 2 DOE60_RS03880 IPR003791 Protein of unknown function UPF0178 DOE60_RS03885 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE60_RS03885 IPR036291 NAD(P)-binding domain superfamily DOE60_RS03885 IPR000304 Pyrroline-5-carboxylate reductase DOE60_RS03885 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS03885 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DOE60_RS03890 IPR000160 GGDEF domain DOE60_RS03890 IPR007894 MASE2 DOE60_RS03890 IPR029787 Nucleotide cyclase DOE60_RS03895 IPR011690 Phosphate-starvation-induced PsiF repeat DOE60_RS03905 IPR019732 Sigma-S stabilisation anti-adaptor protein DOE60_RS03910 IPR023692 Multidrug resistance protein MdtG DOE60_RS03910 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE60_RS03910 IPR036259 MFS transporter superfamily DOE60_RS03910 IPR020846 Major facilitator superfamily domain DOE60_RS03910 IPR011701 Major facilitator superfamily DOE60_RS03920 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS03920 IPR011761 ATP-grasp fold DOE60_RS03920 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOE60_RS03920 IPR005905 D-alanine--D-alanine ligase DOE60_RS03920 IPR011095 D-alanine--D-alanine ligase, C-terminal DOE60_RS03920 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOE60_RS03920 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS03925 IPR020490 Uncharacterised protein family YaiZ DOE60_RS03930 IPR020513 Uncharacterised protein family, inner membrane YaiY DOE60_RS03935 IPR011673 Protein of unknown function DUF1615 DOE60_RS03940 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS03940 IPR009248 SbmA/BacA-like DOE60_RS03950 IPR001466 Beta-lactamase-related DOE60_RS03950 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS03955 IPR018490 Cyclic nucleotide-binding-like DOE60_RS03955 IPR000595 Cyclic nucleotide-binding domain DOE60_RS03955 IPR034719 Inhibitor of hydrogen peroxide resistance DOE60_RS03955 IPR041687 IprA, winged helix-turn-helix domain DOE60_RS03960 IPR036709 Autotransporter beta-domain superfamily DOE60_RS03960 IPR006315 Outer membrane autotransporter barrel DOE60_RS03960 IPR011050 Pectin lyase fold/virulence factor DOE60_RS03960 IPR003991 Pertactin virulence factor family DOE60_RS03960 IPR005546 Autotransporter beta-domain DOE60_RS03965 IPR013785 Aldolase-type TIM barrel DOE60_RS03965 IPR001731 Delta-aminolevulinic acid dehydratase DOE60_RS03965 IPR030656 Delta-aminolevulinic acid dehydratase, active site DOE60_RS03970 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DOE60_RS03970 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS03970 IPR020845 AMP-binding, conserved site DOE60_RS03970 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS03970 IPR012694 Propionate--CoA ligase DOE60_RS03970 IPR000873 AMP-dependent synthetase/ligase DOE60_RS03975 IPR005656 MmgE/PrpD DOE60_RS03975 IPR036148 MmgE/PrpD superfamily DOE60_RS03975 IPR042188 MmgE/PrpD superfamily, domain 2 DOE60_RS03975 IPR042183 MmgE/PrpD superfamily, domain 1 DOE60_RS03975 IPR012705 2-methylcitrate dehydratase PrpD DOE60_RS03980 IPR019810 Citrate synthase active site DOE60_RS03980 IPR011278 2-methylcitrate synthase/citrate synthase type I DOE60_RS03980 IPR016142 Citrate synthase-like, large alpha subdomain DOE60_RS03980 IPR016143 Citrate synthase-like, small alpha subdomain DOE60_RS03980 IPR002020 Citrate synthase DOE60_RS03980 IPR036969 Citrate synthase superfamily DOE60_RS03980 IPR024176 Citrate synthase, bacterial-type DOE60_RS03985 IPR039556 ICL/PEPM domain DOE60_RS03985 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOE60_RS03985 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS03985 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS03985 IPR012695 2-methylisocitrate lyase DOE60_RS03990 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS03990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS03990 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS03990 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS03990 IPR003593 AAA+ ATPase domain DOE60_RS03990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS03990 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR DOE60_RS03990 IPR009057 Homeobox-like domain superfamily DOE60_RS03990 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal DOE60_RS03995 IPR010854 Domain of unknown function DUF1471 DOE60_RS03995 IPR036275 YdgH-like superfamily DOE60_RS03995 IPR025543 Dodecin-like DOE60_RS04000 IPR001123 Amino acid exporter protein, LeuE-type DOE60_RS04000 IPR004778 Homoserine/Threonine efflux protein DOE60_RS04005 IPR010105 TonB-dependent siderophore receptor DOE60_RS04005 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS04005 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS04005 IPR039423 TonB-dependent receptor-like DOE60_RS04005 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS04005 IPR012910 TonB-dependent receptor, plug domain DOE60_RS04020 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE60_RS04025 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE60_RS04035 IPR006935 Helicase/UvrB, N-terminal DOE60_RS04035 IPR014883 VRR-NUC domain DOE60_RS04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS04040 IPR041405 Type III R-M EcoP15I, C-terminal DOE60_RS04040 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class DOE60_RS04040 IPR002941 DNA methylase N-4/N-6 DOE60_RS04040 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS04040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS04045 IPR036259 MFS transporter superfamily DOE60_RS04045 IPR011701 Major facilitator superfamily DOE60_RS04045 IPR020846 Major facilitator superfamily domain DOE60_RS04055 IPR015358 Transcription regulator MerR, DNA binding DOE60_RS04055 IPR000551 MerR-type HTH domain DOE60_RS04055 IPR009061 Putative DNA-binding domain superfamily DOE60_RS04055 IPR011789 Cu(I)-responsive transcriptional regulator DOE60_RS04060 IPR001757 P-type ATPase DOE60_RS04060 IPR027256 P-type ATPase, subfamily IB DOE60_RS04060 IPR036163 Heavy metal-associated domain superfamily DOE60_RS04060 IPR006121 Heavy metal-associated domain, HMA DOE60_RS04060 IPR006122 Heavy metal-associated domain, copper ion-binding DOE60_RS04060 IPR008250 P-type ATPase, A domain superfamily DOE60_RS04060 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS04060 IPR023214 HAD superfamily DOE60_RS04060 IPR036412 HAD-like superfamily DOE60_RS04060 IPR018303 P-type ATPase, phosphorylation site DOE60_RS04060 IPR017969 Heavy-metal-associated, conserved site DOE60_RS04060 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS04065 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS04065 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS04070 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE60_RS04070 IPR001036 Acriflavin resistance protein DOE60_RS04070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS04075 IPR003423 Outer membrane efflux protein DOE60_RS04075 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE60_RS04095 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS04095 IPR027385 Outer membrane protein beta-barrel domain DOE60_RS04095 IPR000758 Virulence-related outer membrane protein DOE60_RS04110 IPR001633 EAL domain DOE60_RS04110 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE60_RS04110 IPR035919 EAL domain superfamily DOE60_RS04130 IPR039458 FimA-like DOE60_RS04130 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS04130 IPR008966 Adhesion domain superfamily DOE60_RS04135 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS04135 IPR008962 PapD-like superfamily DOE60_RS04135 IPR013783 Immunoglobulin-like fold DOE60_RS04135 IPR018046 Pili assembly chaperone, conserved site DOE60_RS04135 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS04135 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS04135 IPR001829 Pili assembly chaperone, bacterial DOE60_RS04140 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS04140 IPR037224 PapC, N-terminal domain superfamily DOE60_RS04140 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS04140 IPR025885 PapC, N-terminal domain DOE60_RS04140 IPR025949 PapC-like, C-terminal domain DOE60_RS04140 IPR000015 Outer membrane usher protein DOE60_RS04150 IPR013783 Immunoglobulin-like fold DOE60_RS04150 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS04150 IPR001829 Pili assembly chaperone, bacterial DOE60_RS04150 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS04150 IPR018046 Pili assembly chaperone, conserved site DOE60_RS04150 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS04150 IPR008962 PapD-like superfamily DOE60_RS04155 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS04155 IPR001927 Sodium:galactoside symporter DOE60_RS04155 IPR036259 MFS transporter superfamily DOE60_RS04155 IPR039672 Lactose permease-like DOE60_RS04170 IPR003836 Glucokinase DOE60_RS04175 IPR003807 Domain of unknown function DUF202 DOE60_RS04185 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS04185 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS04185 IPR000847 Transcription regulator HTH, LysR DOE60_RS04185 IPR005119 LysR, substrate-binding DOE60_RS04200 IPR023380 DsbB-like superfamily DOE60_RS04200 IPR022920 Disulphide bond formation protein DsbB DOE60_RS04200 IPR003752 Disulphide bond formation protein DsbB/BdbC DOE60_RS04210 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOE60_RS04210 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOE60_RS04210 IPR036366 PGBD superfamily DOE60_RS04210 IPR036365 PGBD-like superfamily DOE60_RS04235 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS04235 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS04235 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS04360 IPR006528 Phage head morphogenesis domain DOE60_RS04360 IPR000836 Phosphoribosyltransferase domain DOE60_RS04390 IPR023346 Lysozyme-like domain superfamily DOE60_RS04390 IPR000726 Glycoside hydrolase, family 19, catalytic DOE60_RS04455 IPR036687 DinI-like superfamily DOE60_RS04455 IPR010391 DNA damage-inducible protein DinI-like DOE60_RS04495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS04495 IPR002611 IstB-like ATP-binding protein DOE60_RS04495 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein DOE60_RS04530 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain DOE60_RS04530 IPR010584 Exodeoxyribonuclease 8 DOE60_RS04550 IPR002104 Integrase, catalytic domain DOE60_RS04550 IPR010998 Integrase/recombinase, N-terminal DOE60_RS04550 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS04550 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS04560 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS04560 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS04560 IPR015590 Aldehyde dehydrogenase domain DOE60_RS04560 IPR000965 GPR domain DOE60_RS04560 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DOE60_RS04560 IPR012134 Glutamate-5-semialdehyde dehydrogenase DOE60_RS04560 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS04565 IPR011529 Glutamate 5-kinase DOE60_RS04565 IPR036974 PUA domain superfamily DOE60_RS04565 IPR015947 PUA-like superfamily DOE60_RS04565 IPR019797 Glutamate 5-kinase, conserved site DOE60_RS04565 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DOE60_RS04565 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS04565 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS04565 IPR041739 Glutamate-5-kinase domain DOE60_RS04565 IPR002478 PUA domain DOE60_RS04565 IPR001057 Glutamate/acetylglutamate kinase DOE60_RS04570 IPR001897 Porin, gammaproteobacterial DOE60_RS04570 IPR023614 Porin domain superfamily DOE60_RS04570 IPR001702 Porin, Gram-negative type DOE60_RS04570 IPR033900 Porin domain, Gram-negative type DOE60_RS04570 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS04575 IPR038208 Sigma factor-binding protein Crl superfamily DOE60_RS04575 IPR009986 Sigma factor-binding transcriptional regulator Crl DOE60_RS04580 IPR029058 Alpha/Beta hydrolase fold DOE60_RS04580 IPR010520 UPF0255 family DOE60_RS04585 IPR000836 Phosphoribosyltransferase domain DOE60_RS04585 IPR029057 Phosphoribosyltransferase-like DOE60_RS04585 IPR023747 Xanthine-guanine phosphoribosyltransferase DOE60_RS04590 IPR001160 Peptidase M20C, Xaa-His dipeptidase DOE60_RS04590 IPR011650 Peptidase M20, dimerisation domain DOE60_RS04590 IPR002933 Peptidase M20 DOE60_RS04595 IPR017509 Putative peptide chain release factor H DOE60_RS04595 IPR000352 Peptide chain release factor class I DOE60_RS04600 IPR036025 tRNA-splicing ligase RtcB-like superfamily DOE60_RS04605 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOE60_RS04605 IPR001126 UmuC domain DOE60_RS04605 IPR024728 DNA polymerase type-Y, HhH motif DOE60_RS04605 IPR022880 DNA polymerase IV DOE60_RS04605 IPR017961 DNA polymerase, Y-family, little finger domain DOE60_RS04610 IPR005490 L,D-transpeptidase catalytic domain DOE60_RS04610 IPR038063 L,D-transpeptidase catalytic domain-like DOE60_RS04615 IPR026869 Putative glutamine amidotransferase type 2 DOE60_RS04615 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS04615 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS04620 IPR035461 GmhA/DiaA DOE60_RS04620 IPR004515 Phosphoheptose isomerase DOE60_RS04620 IPR001347 Sugar isomerase (SIS) DOE60_RS04625 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type DOE60_RS04625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOE60_RS04625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE60_RS04625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOE60_RS04625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE60_RS04625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE60_RS04625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE60_RS04630 IPR003010 Carbon-nitrogen hydrolase DOE60_RS04630 IPR036526 Carbon-nitrogen hydrolase superfamily DOE60_RS04630 IPR001110 Uncharacterised protein family UPF0012, conserved site DOE60_RS04645 IPR027385 Outer membrane protein beta-barrel domain DOE60_RS04645 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS04705 IPR006530 YD repeat DOE60_RS04705 IPR022385 Rhs repeat-associated core DOE60_RS04705 IPR001826 RHS protein DOE60_RS04705 IPR025479 Domain of unknown function DUF4329 DOE60_RS04705 IPR031325 RHS repeat DOE60_RS04730 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS04765 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DOE60_RS04765 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DOE60_RS04765 IPR037026 Vgr protein, OB-fold domain superfamily DOE60_RS04765 IPR006531 Gp5 N-terminal DOE60_RS04770 IPR036624 Hcp1-like superfamily DOE60_RS04770 IPR008514 Type VI secretion system effector, Hcp DOE60_RS04780 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DOE60_RS04810 IPR010263 Type VI secretion protein, VC_A0114 DOE60_RS04820 IPR036628 Clp, N-terminal domain superfamily DOE60_RS04820 IPR003959 ATPase, AAA-type, core DOE60_RS04820 IPR017729 Type VI secretion system, ATPase ClpV1 DOE60_RS04820 IPR019489 Clp ATPase, C-terminal DOE60_RS04820 IPR001270 ClpA/B family DOE60_RS04820 IPR018368 ClpA/B, conserved site 1 DOE60_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS04820 IPR041546 ClpA/ClpB, AAA lid domain DOE60_RS04820 IPR003593 AAA+ ATPase domain DOE60_RS04820 IPR004176 Clp, N-terminal DOE60_RS04835 IPR009612 IcmF-related DOE60_RS04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS04835 IPR010623 Type VI secretion system IcmF, C-terminal DOE60_RS04835 IPR025743 IcmF-related, N-terminal domain DOE60_RS04835 IPR017731 Type VI secretion system, IcmF DOE60_RS04890 IPR006309 DNA polymerase 3, epsilon subunit DOE60_RS04890 IPR036397 Ribonuclease H superfamily DOE60_RS04890 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DOE60_RS04890 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE60_RS04890 IPR012337 Ribonuclease H-like superfamily DOE60_RS04895 IPR012337 Ribonuclease H-like superfamily DOE60_RS04895 IPR002156 Ribonuclease H domain DOE60_RS04895 IPR036397 Ribonuclease H superfamily DOE60_RS04895 IPR022892 Ribonuclease HI DOE60_RS04900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS04900 IPR026669 Arsenite methyltransferase-like DOE60_RS04900 IPR013216 Methyltransferase type 11 DOE60_RS04905 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DOE60_RS04905 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS04905 IPR001279 Metallo-beta-lactamase DOE60_RS04905 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DOE60_RS04905 IPR017782 Hydroxyacylglutathione hydrolase DOE60_RS04910 IPR008258 Transglycosylase SLT domain 1 DOE60_RS04910 IPR018392 LysM domain DOE60_RS04910 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS04910 IPR023346 Lysozyme-like domain superfamily DOE60_RS04910 IPR036779 LysM domain superfamily DOE60_RS04915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS04915 IPR013216 Methyltransferase type 11 DOE60_RS04920 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE60_RS04920 IPR022958 Uncharacterised protein family UPF0294 DOE60_RS04920 IPR005135 Endonuclease/exonuclease/phosphatase DOE60_RS04925 IPR000847 Transcription regulator HTH, LysR DOE60_RS04925 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS04925 IPR005119 LysR, substrate-binding DOE60_RS04925 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS04960 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DOE60_RS04960 IPR023214 HAD superfamily DOE60_RS04960 IPR036412 HAD-like superfamily DOE60_RS04960 IPR006543 Histidinol-phosphate phosphatase DOE60_RS04960 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DOE60_RS04965 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria DOE60_RS04965 IPR018449 NIL domain DOE60_RS04965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS04965 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DOE60_RS04965 IPR017871 ABC transporter, conserved site DOE60_RS04965 IPR003439 ABC transporter-like DOE60_RS04965 IPR003593 AAA+ ATPase domain DOE60_RS04965 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DOE60_RS04965 IPR026253 Methionine import ATP-binding protein MetN DOE60_RS04970 IPR035906 MetI-like superfamily DOE60_RS04970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS04975 IPR004872 Lipoprotein NlpA family DOE60_RS04980 IPR030852 Outer membrane lipoprotein RcsF DOE60_RS04985 IPR023368 Uncharacterised protein family UPF0066, conserved site DOE60_RS04985 IPR040372 YaeB-like DOE60_RS04985 IPR041369 TrmO, C-terminal DOE60_RS04985 IPR036413 YaeB-like superfamily DOE60_RS04985 IPR036414 YaeB, N-terminal domain superfamily DOE60_RS04985 IPR023370 TrmO-like, N-terminal domain DOE60_RS04990 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE60_RS04990 IPR004154 Anticodon-binding DOE60_RS04990 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE60_RS04990 IPR033730 Prokaryote proline-tRNA ligase core domain DOE60_RS04990 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DOE60_RS04990 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DOE60_RS04990 IPR002316 Proline-tRNA ligase, class IIa DOE60_RS04990 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE60_RS04990 IPR036621 Anticodon-binding domain superfamily DOE60_RS04990 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS04995 IPR038139 NlpE, C-terminal domain superfamily DOE60_RS04995 IPR007298 Copper resistance lipoprotein NlpE DOE60_RS04995 IPR033450 NlpE, C-terminal OB domain DOE60_RS05000 IPR000352 Peptide chain release factor class I DOE60_RS05005 IPR011335 Restriction endonuclease type II-like DOE60_RS05005 IPR038590 YaeQ superfamily DOE60_RS05005 IPR009822 YaeQ DOE60_RS05010 IPR009624 Uncharacterised protein family UPF0253 DOE60_RS05015 IPR038626 Rof-like superfamily DOE60_RS05015 IPR023534 Rof/RNase P-like DOE60_RS05015 IPR009778 Modulator of Rho-dependent transcription termination DOE60_RS05020 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DOE60_RS05020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05020 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOE60_RS05020 IPR012094 tRNA(Ile)-lysidine synthase DOE60_RS05020 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal DOE60_RS05020 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain DOE60_RS05025 IPR037478 YwkD-like domain DOE60_RS05025 IPR037523 Vicinal oxygen chelate (VOC) domain DOE60_RS05025 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE60_RS05025 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE60_RS05030 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE60_RS05030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS05030 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE60_RS05030 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE60_RS05030 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE60_RS05030 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS05030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS05030 IPR011193 Ornithine/lysine/arginine decarboxylase DOE60_RS05035 IPR014756 Immunoglobulin E-set DOE60_RS05035 IPR020879 N-acetylglucosamine-binding protein A DOE60_RS05035 IPR041029 N-acetylglucosamine binding protein A domain 2 DOE60_RS05035 IPR004302 Cellulose/chitin-binding protein, N-terminal DOE60_RS05040 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS05040 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DOE60_RS05040 IPR001095 Acetyl-CoA carboxylase, alpha subunit DOE60_RS05045 IPR004013 PHP domain DOE60_RS05045 IPR016195 Polymerase/histidinol phosphatase-like DOE60_RS05045 IPR029460 DNA polymerase, helix-hairpin-helix motif DOE60_RS05045 IPR040982 DNA polymerase III alpha subunit finger domain DOE60_RS05045 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DOE60_RS05045 IPR004805 DNA polymerase III, alpha subunit DOE60_RS05045 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE60_RS05045 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE60_RS05045 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain DOE60_RS05050 IPR036397 Ribonuclease H superfamily DOE60_RS05050 IPR012337 Ribonuclease H-like superfamily DOE60_RS05050 IPR024567 Ribonuclease HII/HIII domain DOE60_RS05050 IPR001352 Ribonuclease HII/HIII DOE60_RS05050 IPR022898 Ribonuclease HII DOE60_RS05055 IPR003835 Glycosyl transferase, family 19 DOE60_RS05060 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal DOE60_RS05060 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily DOE60_RS05060 IPR001451 Hexapeptide repeat DOE60_RS05060 IPR018357 Hexapeptide transferase, conserved site DOE60_RS05060 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DOE60_RS05060 IPR011004 Trimeric LpxA-like superfamily DOE60_RS05065 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DOE60_RS05065 IPR029069 HotDog domain superfamily DOE60_RS05065 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOE60_RS05070 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region DOE60_RS05070 IPR011004 Trimeric LpxA-like superfamily DOE60_RS05070 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD DOE60_RS05070 IPR018357 Hexapeptide transferase, conserved site DOE60_RS05070 IPR001451 Hexapeptide repeat DOE60_RS05075 IPR005632 Chaperone protein Skp DOE60_RS05075 IPR024930 Skp domain superfamily DOE60_RS05080 IPR023707 Outer membrane protein assembly factor BamA DOE60_RS05080 IPR034746 POTRA domain DOE60_RS05080 IPR000184 Bacterial surface antigen (D15) DOE60_RS05080 IPR010827 POTRA domain, BamA/TamA-like DOE60_RS05080 IPR039910 Surface antigen D15-like DOE60_RS05085 IPR036034 PDZ superfamily DOE60_RS05085 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase DOE60_RS05085 IPR041489 PDZ domain 6 DOE60_RS05085 IPR001478 PDZ domain DOE60_RS05085 IPR008915 Peptidase M50 DOE60_RS05090 IPR000374 Phosphatidate cytidylyltransferase DOE60_RS05095 IPR036424 Decaprenyl diphosphate synthase-like superfamily DOE60_RS05095 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DOE60_RS05095 IPR001441 Decaprenyl diphosphate synthase-like DOE60_RS05105 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DOE60_RS05105 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DOE60_RS05105 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DOE60_RS05105 IPR036291 NAD(P)-binding domain superfamily DOE60_RS05105 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DOE60_RS05105 IPR026877 DXP reductoisomerase C-terminal domain DOE60_RS05110 IPR023584 Ribosome recycling factor domain DOE60_RS05110 IPR036191 RRF superfamily DOE60_RS05110 IPR002661 Ribosome recycling factor DOE60_RS05115 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS05115 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS05115 IPR011817 Uridylate kinase DOE60_RS05115 IPR015963 Uridylate kinase, bacteria DOE60_RS05120 IPR018101 Translation elongation factor Ts, conserved site DOE60_RS05120 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DOE60_RS05120 IPR001816 Translation elongation factor EFTs/EF1B DOE60_RS05120 IPR036402 Elongation factor Ts, dimerisation domain superfamily DOE60_RS05120 IPR009060 UBA-like superfamily DOE60_RS05130 IPR001865 Ribosomal protein S2 DOE60_RS05130 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DOE60_RS05130 IPR018130 Ribosomal protein S2, conserved site DOE60_RS05130 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DOE60_RS05135 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DOE60_RS05135 IPR036005 Creatinase/aminopeptidase-like DOE60_RS05135 IPR000994 Peptidase M24 DOE60_RS05135 IPR001714 Peptidase M24, methionine aminopeptidase DOE60_RS05140 IPR002912 ACT domain DOE60_RS05140 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme DOE60_RS05140 IPR006674 HD domain DOE60_RS05140 IPR002934 Polymerase, nucleotidyl transferase domain DOE60_RS05140 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DOE60_RS05140 IPR003607 HD/PDEase domain DOE60_RS05145 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DOE60_RS05145 IPR001451 Hexapeptide repeat DOE60_RS05145 IPR018357 Hexapeptide transferase, conserved site DOE60_RS05145 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DOE60_RS05145 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily DOE60_RS05145 IPR011004 Trimeric LpxA-like superfamily DOE60_RS05150 IPR020846 Major facilitator superfamily domain DOE60_RS05150 IPR011701 Major facilitator superfamily DOE60_RS05150 IPR005829 Sugar transporter, conserved site DOE60_RS05150 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS05150 IPR036259 MFS transporter superfamily DOE60_RS05150 IPR005828 Major facilitator, sugar transporter-like DOE60_RS05155 IPR020911 Uncharacterised protein family UPF0325 DOE60_RS05165 IPR008599 Putative sugar diacid recognition DOE60_RS05165 IPR025736 PucR C-terminal helix-turn-helix domain DOE60_RS05165 IPR042070 PucR C-terminal helix-turn-helix domain superfamily DOE60_RS05165 IPR041522 CdaR, GGDEF-like domain DOE60_RS05170 IPR009003 Peptidase S1, PA clan DOE60_RS05170 IPR001940 Peptidase S1C DOE60_RS05170 IPR001478 PDZ domain DOE60_RS05170 IPR036034 PDZ superfamily DOE60_RS05170 IPR011782 Peptidase S1C, Do DOE60_RS05175 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily DOE60_RS05175 IPR020779 dNTP triphosphohydrolase, type 1 DOE60_RS05175 IPR006674 HD domain DOE60_RS05175 IPR026875 Phosphohydrolase-associated domain DOE60_RS05175 IPR006261 dNTP triphosphohydrolase DOE60_RS05175 IPR003607 HD/PDEase domain DOE60_RS05180 IPR035994 Nucleoside phosphorylase superfamily DOE60_RS05180 IPR000845 Nucleoside phosphorylase domain DOE60_RS05180 IPR010049 MTA/SAH nucleosidase DOE60_RS05185 IPR023544 ABC transporter, vitamin B12-binding protein DOE60_RS05185 IPR002491 ABC transporter periplasmic binding domain DOE60_RS05190 IPR005115 Uncharacterised domain UPF0126 DOE60_RS05195 IPR023063 FeS cluster insertion protein ErpA DOE60_RS05195 IPR035903 HesB-like domain superfamily DOE60_RS05195 IPR016092 FeS cluster insertion protein DOE60_RS05195 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE60_RS05195 IPR000361 FeS cluster biogenesis DOE60_RS05200 IPR001807 Chloride channel, voltage gated DOE60_RS05200 IPR014743 Chloride channel, core DOE60_RS05200 IPR023861 Chloride channel, ClcA DOE60_RS05205 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DOE60_RS05205 IPR005814 Aminotransferase class-III DOE60_RS05205 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS05205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS05205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS05215 IPR037294 ABC transporter, BtuC-like DOE60_RS05215 IPR000522 ABC transporter, permease protein, BtuC-like DOE60_RS05220 IPR002491 ABC transporter periplasmic binding domain DOE60_RS05225 IPR003439 ABC transporter-like DOE60_RS05225 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05225 IPR017871 ABC transporter, conserved site DOE60_RS05225 IPR003593 AAA+ ATPase domain DOE60_RS05230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS05230 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS05230 IPR010917 TonB-dependent receptor, conserved site DOE60_RS05230 IPR012910 TonB-dependent receptor, plug domain DOE60_RS05230 IPR010105 TonB-dependent siderophore receptor DOE60_RS05230 IPR010916 TonB box, conserved site DOE60_RS05230 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS05230 IPR039423 TonB-dependent receptor-like DOE60_RS05235 IPR001264 Glycosyl transferase, family 51 DOE60_RS05235 IPR036950 Penicillin binding protein transglycosylase domain DOE60_RS05235 IPR028166 Bifunctional transglycosylase second domain DOE60_RS05235 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS05235 IPR023346 Lysozyme-like domain superfamily DOE60_RS05235 IPR011813 Penicillin-binding protein 1B DOE60_RS05235 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain DOE60_RS05235 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS05240 IPR011545 DEAD/DEAH box helicase domain DOE60_RS05240 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DOE60_RS05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05240 IPR010225 ATP-dependent helicase HrpB DOE60_RS05240 IPR001650 Helicase, C-terminal DOE60_RS05240 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS05240 IPR007502 Helicase-associated domain DOE60_RS05245 IPR009097 Cyclic phosphodiesterase DOE60_RS05245 IPR014051 Phosphoesterase, HXTX DOE60_RS05245 IPR004175 RNA 2',3'-cyclic phosphodiesterase DOE60_RS05250 IPR005224 Sugar fermentation stimulation protein DOE60_RS05250 IPR041465 SfsA, N-terminal OB domain DOE60_RS05250 IPR040452 Sugar fermentation stimulation protein, C-terminal DOE60_RS05255 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DOE60_RS05255 IPR037187 DksA, N-terminal domain superfamily DOE60_RS05255 IPR012784 RNA polymerase-binding transcription factor DksA DOE60_RS05255 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOE60_RS05255 IPR000962 Zinc finger, DksA/TraR C4-type DOE60_RS05260 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE60_RS05260 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE60_RS05260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05260 IPR022380 Glutamyl-Q tRNA(Asp) synthetase DOE60_RS05265 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOE60_RS05265 IPR025866 Polymerase A arginine-rich C-terminal domain DOE60_RS05265 IPR010206 Poly(A) polymerase I DOE60_RS05265 IPR002646 Poly A polymerase, head domain DOE60_RS05270 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DOE60_RS05270 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DOE60_RS05280 IPR013783 Immunoglobulin-like fold DOE60_RS05280 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS05280 IPR001829 Pili assembly chaperone, bacterial DOE60_RS05280 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS05280 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS05280 IPR018046 Pili assembly chaperone, conserved site DOE60_RS05280 IPR008962 PapD-like superfamily DOE60_RS05285 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS05285 IPR000015 Outer membrane usher protein DOE60_RS05285 IPR025885 PapC, N-terminal domain DOE60_RS05285 IPR025949 PapC-like, C-terminal domain DOE60_RS05285 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS05285 IPR037224 PapC, N-terminal domain superfamily DOE60_RS05290 IPR008966 Adhesion domain superfamily DOE60_RS05290 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS05290 IPR000259 Fimbrial-type adhesion domain DOE60_RS05295 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS05295 IPR008966 Adhesion domain superfamily DOE60_RS05295 IPR000259 Fimbrial-type adhesion domain DOE60_RS05300 IPR000259 Fimbrial-type adhesion domain DOE60_RS05300 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS05300 IPR008966 Adhesion domain superfamily DOE60_RS05310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS05310 IPR003700 Ketopantoate hydroxymethyltransferase DOE60_RS05310 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS05315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05315 IPR004821 Cytidyltransferase-like domain DOE60_RS05315 IPR003721 Pantoate-beta-alanine ligase DOE60_RS05315 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain DOE60_RS05320 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS05320 IPR003190 Aspartate decarboxylase DOE60_RS05325 IPR002509 NodB homology domain DOE60_RS05325 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS05330 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE60_RS05330 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS05330 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS05335 IPR013525 ABC-2 type transporter DOE60_RS05335 IPR000412 ABC-2 transporter DOE60_RS05340 IPR017871 ABC transporter, conserved site DOE60_RS05340 IPR003439 ABC transporter-like DOE60_RS05340 IPR003593 AAA+ ATPase domain DOE60_RS05340 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05345 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DOE60_RS05345 IPR036874 Carbonic anhydrase superfamily DOE60_RS05345 IPR001765 Carbonic anhydrase DOE60_RS05350 IPR005904 Hypoxanthine phosphoribosyl transferase DOE60_RS05350 IPR000836 Phosphoribosyltransferase domain DOE60_RS05350 IPR029057 Phosphoribosyltransferase-like DOE60_RS05355 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOE60_RS05355 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOE60_RS05355 IPR017511 PQQ-dependent membrane bound dehydrogenase DOE60_RS05355 IPR002372 Pyrrolo-quinoline quinone repeat DOE60_RS05355 IPR001479 Quinoprotein dehydrogenase, conserved site DOE60_RS05360 IPR008972 Cupredoxin DOE60_RS05360 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS05360 IPR011706 Multicopper oxidase, type 2 DOE60_RS05360 IPR001117 Multicopper oxidase, type 1 DOE60_RS05360 IPR002355 Multicopper oxidase, copper-binding site DOE60_RS05360 IPR011707 Multicopper oxidase, type 3 DOE60_RS05365 IPR038432 PulS/OutS-like superfamily DOE60_RS05365 IPR019114 Chaperone lipoprotein, PulS/OutS-like DOE60_RS05370 IPR030374 Polyamine biosynthesis domain DOE60_RS05370 IPR030373 Polyamine biosynthesis domain, conserved site DOE60_RS05370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS05370 IPR001045 Spermidine/spermine synthases DOE60_RS05370 IPR035246 Spermidine synthase, tetramerisation domain DOE60_RS05370 IPR037163 Spermidine synthase, tetramerisation domain superfamily DOE60_RS05375 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic DOE60_RS05375 IPR009165 S-adenosylmethionine decarboxylase, bacterial DOE60_RS05375 IPR016067 S-adenosylmethionine decarboxylase, core DOE60_RS05380 IPR001034 DeoR-type HTH domain DOE60_RS05380 IPR037171 NagB/RpiA transferase-like DOE60_RS05380 IPR014036 DeoR C-terminal sensor domain DOE60_RS05380 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS05380 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS05380 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS05385 IPR005255 PdxA family DOE60_RS05390 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DOE60_RS05390 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DOE60_RS05390 IPR031475 Nucleotide-binding C-terminal domain DOE60_RS05390 IPR042213 Nucleotide-binding, C-terminal domain superfamily DOE60_RS05395 IPR004684 2-keto-3-deoxygluconate permease DOE60_RS05400 IPR008249 Uncharacterised protein family UPF0231 DOE60_RS05410 IPR004406 Aconitase B DOE60_RS05410 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE60_RS05410 IPR036288 Aconitase B, HEAT-like domain superfamily DOE60_RS05410 IPR015929 Aconitase B, swivel DOE60_RS05410 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE60_RS05410 IPR036008 Aconitase, iron-sulfur domain DOE60_RS05410 IPR015933 Aconitase B, HEAT-like domain DOE60_RS05410 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE60_RS05410 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE60_RS05410 IPR015932 Aconitase, domain 2 DOE60_RS05415 IPR021728 Protein of unknown function DUF3300 DOE60_RS05430 IPR023753 FAD/NAD(P)-binding domain DOE60_RS05430 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS05430 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE60_RS05430 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE60_RS05430 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE60_RS05430 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE60_RS05430 IPR006258 Dihydrolipoamide dehydrogenase DOE60_RS05435 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOE60_RS05435 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DOE60_RS05435 IPR000089 Biotin/lipoyl attachment DOE60_RS05435 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE60_RS05435 IPR036625 E3-binding domain superfamily DOE60_RS05435 IPR004167 Peripheral subunit-binding domain DOE60_RS05435 IPR011053 Single hybrid motif DOE60_RS05435 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE60_RS05440 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal DOE60_RS05440 IPR005474 Transketolase, N-terminal DOE60_RS05440 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS05440 IPR029061 Thiamin diphosphate-binding fold DOE60_RS05440 IPR041621 Pyruvate dehydrogenase E1 component, middle domain DOE60_RS05440 IPR004660 Pyruvate dehydrogenase E1 component DOE60_RS05445 IPR011711 GntR, C-terminal DOE60_RS05445 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS05445 IPR000524 Transcription regulator HTH, GntR DOE60_RS05445 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS05445 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS05450 IPR000290 Colicin immunity protein/pyocin immunity protein DOE60_RS05450 IPR035900 Colicin E immunity protein superfamily DOE60_RS05460 IPR035900 Colicin E immunity protein superfamily DOE60_RS05460 IPR000290 Colicin immunity protein/pyocin immunity protein DOE60_RS05470 IPR000290 Colicin immunity protein/pyocin immunity protein DOE60_RS05470 IPR035900 Colicin E immunity protein superfamily DOE60_RS05475 IPR035900 Colicin E immunity protein superfamily DOE60_RS05475 IPR000290 Colicin immunity protein/pyocin immunity protein DOE60_RS05485 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS05485 IPR004840 Amino acid permease, conserved site DOE60_RS05490 IPR039672 Lactose permease-like DOE60_RS05490 IPR036259 MFS transporter superfamily DOE60_RS05490 IPR001927 Sodium:galactoside symporter DOE60_RS05490 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS05495 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE60_RS05495 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain DOE60_RS05495 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily DOE60_RS05495 IPR006710 Glycoside hydrolase, family 43 DOE60_RS05500 IPR031347 Protein AmpE DOE60_RS05505 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOE60_RS05505 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOE60_RS05510 IPR004393 Nicotinate-nucleotide pyrophosphorylase DOE60_RS05510 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily DOE60_RS05510 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DOE60_RS05510 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DOE60_RS05510 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOE60_RS05510 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DOE60_RS05510 IPR013785 Aldolase-type TIM barrel DOE60_RS05520 IPR012902 Prokaryotic N-terminal methylation site DOE60_RS05525 IPR007831 General secretory system II, protein E, N-terminal DOE60_RS05525 IPR001482 Type II/IV secretion system protein DOE60_RS05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05530 IPR003004 GspF/PilC family DOE60_RS05530 IPR001992 Type II secretion system conserved site DOE60_RS05530 IPR018076 Type II secretion system F domain DOE60_RS05530 IPR042094 Type II secretion system F domain superfamily DOE60_RS05535 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOE60_RS05535 IPR005993 GMP reductase DOE60_RS05535 IPR013785 Aldolase-type TIM barrel DOE60_RS05535 IPR001093 IMP dehydrogenase/GMP reductase DOE60_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05540 IPR001977 Dephospho-CoA kinase DOE60_RS05545 IPR009777 Cell division protein ZapD DOE60_RS05545 IPR027462 Z ring-associated protein D, C-terminal DOE60_RS05545 IPR036268 ZapD domain superfamily DOE60_RS05550 IPR013088 Zinc finger, NHR/GATA-type DOE60_RS05550 IPR005584 DNA gyrase inhibitor YacG DOE60_RS05555 IPR005119 LysR, substrate-binding DOE60_RS05555 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS05555 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS05555 IPR000847 Transcription regulator HTH, LysR DOE60_RS05560 IPR018170 Aldo/keto reductase, conserved site DOE60_RS05560 IPR020471 Aldo/keto reductase DOE60_RS05560 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS05560 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS05565 IPR001959 Probable transposase, IS891/IS1136/IS1341 DOE60_RS05565 IPR010095 Transposase IS605, OrfB, C-terminal DOE60_RS05565 IPR021027 Transposase, putative, helix-turn-helix domain DOE60_RS05575 IPR020476 NUDIX hydrolase DOE60_RS05575 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS05575 IPR020084 NUDIX hydrolase, conserved site DOE60_RS05575 IPR000086 NUDIX hydrolase domain DOE60_RS05575 IPR003561 Mutator MutT DOE60_RS05580 IPR011115 SecA DEAD-like, N-terminal DOE60_RS05580 IPR011130 SecA, preprotein cross-linking domain DOE60_RS05580 IPR014018 SecA motor DEAD DOE60_RS05580 IPR020937 SecA conserved site DOE60_RS05580 IPR036670 SecA, preprotein cross-linking domain superfamily DOE60_RS05580 IPR004027 SEC-C motif DOE60_RS05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05580 IPR036266 SecA, Wing/Scaffold superfamily DOE60_RS05580 IPR000185 Protein translocase subunit SecA DOE60_RS05580 IPR011116 SecA Wing/Scaffold DOE60_RS05585 IPR009502 Secretion monitor DOE60_RS05590 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DOE60_RS05590 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DOE60_RS05590 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DOE60_RS05590 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS05595 IPR024757 Cell division protein FtsZ, C-terminal DOE60_RS05595 IPR008280 Tubulin/FtsZ, C-terminal DOE60_RS05595 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DOE60_RS05595 IPR000158 Cell division protein FtsZ DOE60_RS05595 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DOE60_RS05595 IPR020805 Cell division protein FtsZ, conserved site DOE60_RS05595 IPR003008 Tubulin/FtsZ, GTPase domain DOE60_RS05600 IPR003494 SHS2 domain inserted in FtsA DOE60_RS05600 IPR020823 Cell division protein FtsA DOE60_RS05605 IPR005548 Cell division protein FtsQ/DivIB DOE60_RS05605 IPR034746 POTRA domain DOE60_RS05605 IPR026579 Cell division protein FtsQ DOE60_RS05605 IPR013685 POTRA domain, FtsQ-type DOE60_RS05610 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS05610 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOE60_RS05610 IPR011095 D-alanine--D-alanine ligase, C-terminal DOE60_RS05610 IPR005905 D-alanine--D-alanine ligase DOE60_RS05610 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOE60_RS05610 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS05610 IPR011761 ATP-grasp fold DOE60_RS05615 IPR004101 Mur ligase, C-terminal DOE60_RS05615 IPR013221 Mur ligase, central DOE60_RS05615 IPR000713 Mur ligase, N-terminal catalytic domain DOE60_RS05615 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS05615 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DOE60_RS05615 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS05620 IPR006009 N-acetylglucosaminyltransferase, MurG DOE60_RS05620 IPR007235 Glycosyl transferase, family 28, C-terminal DOE60_RS05620 IPR004276 Glycosyltransferase family 28, N-terminal domain DOE60_RS05625 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOE60_RS05625 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DOE60_RS05625 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DOE60_RS05630 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DOE60_RS05630 IPR013221 Mur ligase, central DOE60_RS05630 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS05630 IPR004101 Mur ligase, C-terminal DOE60_RS05630 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS05635 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DOE60_RS05635 IPR000715 Glycosyl transferase, family 4 DOE60_RS05635 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DOE60_RS05640 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DOE60_RS05640 IPR035911 MurE/MurF, N-terminal DOE60_RS05640 IPR000713 Mur ligase, N-terminal catalytic domain DOE60_RS05640 IPR013221 Mur ligase, central DOE60_RS05640 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS05640 IPR004101 Mur ligase, C-terminal DOE60_RS05640 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS05645 IPR000713 Mur ligase, N-terminal catalytic domain DOE60_RS05645 IPR013221 Mur ligase, central DOE60_RS05645 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS05645 IPR004101 Mur ligase, C-terminal DOE60_RS05645 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS05645 IPR035911 MurE/MurF, N-terminal DOE60_RS05645 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase DOE60_RS05650 IPR005311 Penicillin-binding protein, dimerisation domain DOE60_RS05650 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DOE60_RS05650 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS05650 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS05650 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE60_RS05660 IPR011922 Cell division protein FtsL DOE60_RS05665 IPR002903 Ribosomal RNA small subunit methyltransferase H DOE60_RS05665 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily DOE60_RS05665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS05670 IPR035644 MraZ, C-terminal DOE60_RS05670 IPR020603 MraZ domain DOE60_RS05670 IPR038619 MraZ superfamily DOE60_RS05670 IPR035642 MraZ, N-terminal DOE60_RS05670 IPR007159 SpoVT-AbrB domain DOE60_RS05670 IPR003444 Transcriptional regulator MraZ DOE60_RS05670 IPR037914 SpoVT-AbrB domain superfamily DOE60_RS05675 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE60_RS05675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS05675 IPR000843 LacI-type HTH domain DOE60_RS05675 IPR028082 Periplasmic binding protein-like I DOE60_RS05675 IPR012781 D-fructose-responsive transcription factor DOE60_RS05680 IPR004789 Acetolactate synthase, small subunit DOE60_RS05680 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DOE60_RS05680 IPR019455 Acetolactate synthase, small subunit, C-terminal DOE60_RS05680 IPR039557 AHAS, ACT domain DOE60_RS05680 IPR002912 ACT domain DOE60_RS05685 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS05685 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE60_RS05685 IPR029061 Thiamin diphosphate-binding fold DOE60_RS05685 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS05685 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE60_RS05685 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE60_RS05685 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS05685 IPR000399 TPP-binding enzyme, conserved site DOE60_RS05690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS05690 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS05690 IPR000847 Transcription regulator HTH, LysR DOE60_RS05690 IPR005119 LysR, substrate-binding DOE60_RS05695 IPR012570 Leucine operon leader peptide DOE60_RS05700 IPR000891 Pyruvate carboxyltransferase DOE60_RS05700 IPR005671 2-isopropylmalate synthase, bacterial-type DOE60_RS05700 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DOE60_RS05700 IPR013785 Aldolase-type TIM barrel DOE60_RS05700 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DOE60_RS05700 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DOE60_RS05705 IPR004429 Isopropylmalate dehydrogenase DOE60_RS05705 IPR024084 Isopropylmalate dehydrogenase-like domain DOE60_RS05705 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOE60_RS05710 IPR036008 Aconitase, iron-sulfur domain DOE60_RS05710 IPR033941 3-Isopropylmalate dehydratase, catalytic domain DOE60_RS05710 IPR004430 3-isopropylmalate dehydratase, large subunit DOE60_RS05710 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE60_RS05710 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE60_RS05710 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE60_RS05715 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE60_RS05715 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOE60_RS05715 IPR033940 3-isopropylmalate dehydratase, swivel domain DOE60_RS05715 IPR004431 3-isopropylmalate dehydratase, small subunit DOE60_RS05720 IPR020846 Major facilitator superfamily domain DOE60_RS05720 IPR036259 MFS transporter superfamily DOE60_RS05720 IPR011701 Major facilitator superfamily DOE60_RS05720 IPR004750 Sugar efflux DOE60_RS05730 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS05730 IPR023767 Transcriptional regulator SgrR DOE60_RS05730 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE60_RS05730 IPR000914 Solute-binding protein family 5 domain DOE60_RS05730 IPR039424 Solute-binding protein family 5 DOE60_RS05735 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria DOE60_RS05735 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter DOE60_RS05735 IPR006061 Solute-binding family 1, conserved site DOE60_RS05740 IPR005947 Thiamine ABC transporter, permease protein DOE60_RS05740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS05740 IPR035906 MetI-like superfamily DOE60_RS05745 IPR003439 ABC transporter-like DOE60_RS05745 IPR003593 AAA+ ATPase domain DOE60_RS05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05745 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ DOE60_RS05745 IPR017871 ABC transporter, conserved site DOE60_RS05750 IPR032816 SNARE associated Golgi protein DOE60_RS05750 IPR032818 DedA family DOE60_RS05755 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS05755 IPR037923 Transcription regulator HTH-like DOE60_RS05755 IPR009057 Homeobox-like domain superfamily DOE60_RS05755 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE60_RS05755 IPR018062 HTH domain AraC-type, conserved site DOE60_RS05755 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS05760 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS05760 IPR005929 Ribulokinase DOE60_RS05765 IPR003762 L-arabinose isomerase DOE60_RS05765 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily DOE60_RS05765 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE60_RS05765 IPR038583 L-arabinose isomerase, N-terminal domain superfamily DOE60_RS05765 IPR024664 L-arabinose isomerase, C-terminal DOE60_RS05770 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS05770 IPR004661 L-ribulose-5-phosphate 4-epimerase DOE60_RS05770 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD DOE60_RS05770 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS05795 IPR040765 RapA, N-terminal Tudor like domain 1 DOE60_RS05795 IPR000330 SNF2-related, N-terminal domain DOE60_RS05795 IPR038718 SNF2-like, N-terminal domain superfamily DOE60_RS05795 IPR022737 RNA polymerase recycling, bacterial, C-terminal DOE60_RS05795 IPR040766 RapA, N-terminal Tudor-like domain 2 DOE60_RS05795 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS05795 IPR023949 RNA polymerase-associated protein RapA DOE60_RS05795 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS05795 IPR001650 Helicase, C-terminal DOE60_RS05800 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS05800 IPR006225 Pseudouridine synthase, RluC/RluD DOE60_RS05800 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE60_RS05800 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS05805 IPR029024 TerB-like DOE60_RS05805 IPR007791 Co-chaperone DjlA, N-terminal DOE60_RS05805 IPR001623 DnaJ domain DOE60_RS05805 IPR036869 Chaperone J-domain superfamily DOE60_RS05805 IPR023749 Co-chaperone DjlA DOE60_RS05810 IPR005653 Organic solvent tolerance-like, N-terminal DOE60_RS05810 IPR007543 LptD, C-terminal DOE60_RS05810 IPR020889 LPS-assembly protein LptD DOE60_RS05815 IPR027304 Trigger factor/SurA domain superfamily DOE60_RS05815 IPR023034 Peptidyl-prolyl isomerase SurA DOE60_RS05815 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE60_RS05815 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE60_RS05815 IPR015391 SurA N-terminal DOE60_RS05820 IPR005255 PdxA family DOE60_RS05820 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase DOE60_RS05825 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DOE60_RS05825 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DOE60_RS05825 IPR023165 rRNA adenine dimethylase-like DOE60_RS05825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS05825 IPR011530 Ribosomal RNA adenine dimethylase DOE60_RS05825 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DOE60_RS05830 IPR023065 Uncharacterised protein family ApaG DOE60_RS05830 IPR007474 ApaG domain DOE60_RS05830 IPR036767 ApaG domain superfamily DOE60_RS05835 IPR029052 Metallo-dependent phosphatase-like DOE60_RS05835 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) DOE60_RS05835 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS05840 IPR017925 Dihydrofolate reductase conserved site DOE60_RS05840 IPR012259 Dihydrofolate reductase DOE60_RS05840 IPR001796 Dihydrofolate reductase domain DOE60_RS05840 IPR024072 Dihydrofolate reductase-like domain superfamily DOE60_RS05850 IPR006036 Potassium uptake protein TrkA DOE60_RS05850 IPR038770 Sodium/solute symporter superfamily DOE60_RS05850 IPR006153 Cation/H+ exchanger DOE60_RS05850 IPR003148 Regulator of K+ conductance, N-terminal DOE60_RS05850 IPR023941 Glutathione-regulated potassium-efflux system protein KefC DOE60_RS05850 IPR036291 NAD(P)-binding domain superfamily DOE60_RS05850 IPR004771 K+/H+ exchanger DOE60_RS05855 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF DOE60_RS05855 IPR029039 Flavoprotein-like superfamily DOE60_RS05855 IPR003680 Flavodoxin-like fold DOE60_RS05860 IPR010920 LSM domain superfamily DOE60_RS05860 IPR010305 Protein of unknown function DUF903 DOE60_RS05865 IPR036259 MFS transporter superfamily DOE60_RS05865 IPR005828 Major facilitator, sugar transporter-like DOE60_RS05865 IPR020846 Major facilitator superfamily domain DOE60_RS05870 IPR012206 Ferredoxin-like, FixX DOE60_RS05875 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS05875 IPR002938 FAD-binding domain DOE60_RS05875 IPR039651 Protein FixC-like DOE60_RS05880 IPR023461 Electron transfer flavoprotein FixB subunit DOE60_RS05880 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS05880 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE60_RS05880 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DOE60_RS05880 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DOE60_RS05880 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DOE60_RS05880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05885 IPR012255 Electron transfer flavoprotein, beta subunit DOE60_RS05885 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DOE60_RS05885 IPR023463 Electron transfer flavoprotein, FixA subunit DOE60_RS05885 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DOE60_RS05885 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE60_RS05890 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT DOE60_RS05890 IPR018093 BCCT transporter, conserved site DOE60_RS05890 IPR000060 BCCT transporter family DOE60_RS05895 IPR006089 Acyl-CoA dehydrogenase, conserved site DOE60_RS05895 IPR023450 Crotonobetainyl-CoA reductase CaiA DOE60_RS05895 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE60_RS05895 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOE60_RS05895 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOE60_RS05895 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE60_RS05895 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE60_RS05895 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE60_RS05900 IPR003673 CoA-transferase family III DOE60_RS05900 IPR023452 L-carnitine CoA-transferase CaiB DOE60_RS05900 IPR023606 CoA-transferase family III domain superfamily DOE60_RS05905 IPR020845 AMP-binding, conserved site DOE60_RS05905 IPR000873 AMP-dependent synthetase/ligase DOE60_RS05905 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS05905 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC DOE60_RS05905 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS05910 IPR001753 Enoyl-CoA hydratase/isomerase DOE60_RS05910 IPR022852 Carnitinyl-CoA dehydratase DOE60_RS05910 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS05910 IPR014748 Enoyl-CoA hydratase, C-terminal DOE60_RS05910 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE60_RS05920 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS05920 IPR024607 Sulfatase, conserved site DOE60_RS05920 IPR000917 Sulfatase, N-terminal DOE60_RS05940 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS05940 IPR020357 Transcription regulator CaiF/GrlA DOE60_RS05945 IPR006275 Carbamoyl-phosphate synthase, large subunit DOE60_RS05945 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain DOE60_RS05945 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily DOE60_RS05945 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOE60_RS05945 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain DOE60_RS05945 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain DOE60_RS05945 IPR011607 Methylglyoxal synthase-like domain DOE60_RS05945 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS05945 IPR011761 ATP-grasp fold DOE60_RS05945 IPR036914 Methylglyoxal synthase-like domain superfamily DOE60_RS05950 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain DOE60_RS05950 IPR029062 Class I glutamine amidotransferase-like DOE60_RS05950 IPR017926 Glutamine amidotransferase DOE60_RS05950 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain DOE60_RS05950 IPR006274 Carbamoyl-phosphate synthase, small subunit DOE60_RS05950 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily DOE60_RS05965 IPR036291 NAD(P)-binding domain superfamily DOE60_RS05965 IPR023940 Dihydrodipicolinate reductase DOE60_RS05965 IPR022664 Dihydrodipicolinate reductase, conserved site DOE60_RS05965 IPR022663 Dihydrodipicolinate reductase, C-terminal DOE60_RS05965 IPR000846 Dihydrodipicolinate reductase, N-terminal DOE60_RS05970 IPR036452 Ribonucleoside hydrolase-like DOE60_RS05970 IPR022976 Non-specific ribonucleoside hydrolase RihC DOE60_RS05970 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOE60_RS05970 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOE60_RS05975 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DOE60_RS05980 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS05985 IPR001872 Peptidase A8, signal peptidase II DOE60_RS05990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05990 IPR002301 Isoleucine-tRNA ligase DOE60_RS05990 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS05990 IPR023585 Isoleucine-tRNA ligase, type 1 DOE60_RS05990 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE60_RS05990 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DOE60_RS05990 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE60_RS05990 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS05990 IPR010663 Zinc finger, FPG/IleRS-type DOE60_RS05990 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE60_RS05995 IPR015864 FAD synthetase DOE60_RS05995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS05995 IPR002606 Riboflavin kinase, bacterial DOE60_RS05995 IPR023468 Riboflavin kinase DOE60_RS05995 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DOE60_RS05995 IPR023465 Riboflavin kinase domain superfamily DOE60_RS06000 IPR020105 Uncharacterised protein family YaaY DOE60_RS06005 IPR036510 Ribosomal protein S20 superfamily DOE60_RS06005 IPR002583 Ribosomal protein S20 DOE60_RS06010 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06010 IPR005119 LysR, substrate-binding DOE60_RS06010 IPR000847 Transcription regulator HTH, LysR DOE60_RS06010 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06015 IPR023171 Na/H antiporter domain superfamily DOE60_RS06015 IPR004670 Na+/H+ antiporter NhaA DOE60_RS06030 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE60_RS06030 IPR023885 4Fe4S-binding SPASM domain DOE60_RS06030 IPR013785 Aldolase-type TIM barrel DOE60_RS06030 IPR007197 Radical SAM DOE60_RS06035 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS06035 IPR032158 Domain of unknown function DUF4994 DOE60_RS06035 IPR024607 Sulfatase, conserved site DOE60_RS06035 IPR000917 Sulfatase, N-terminal DOE60_RS06045 IPR006146 5'-Nucleotidase, conserved site DOE60_RS06045 IPR029052 Metallo-dependent phosphatase-like DOE60_RS06045 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS06045 IPR006179 5'-Nucleotidase/apyrase DOE60_RS06045 IPR008334 5'-Nucleotidase, C-terminal DOE60_RS06045 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE60_RS06060 IPR005119 LysR, substrate-binding DOE60_RS06060 IPR000847 Transcription regulator HTH, LysR DOE60_RS06060 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06060 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06080 IPR013783 Immunoglobulin-like fold DOE60_RS06080 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS06080 IPR018046 Pili assembly chaperone, conserved site DOE60_RS06080 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS06080 IPR001829 Pili assembly chaperone, bacterial DOE60_RS06080 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS06080 IPR008962 PapD-like superfamily DOE60_RS06085 IPR039458 FimA-like DOE60_RS06085 IPR008966 Adhesion domain superfamily DOE60_RS06085 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS06090 IPR008966 Adhesion domain superfamily DOE60_RS06090 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS06090 IPR000259 Fimbrial-type adhesion domain DOE60_RS06100 IPR025885 PapC, N-terminal domain DOE60_RS06100 IPR025949 PapC-like, C-terminal domain DOE60_RS06100 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS06100 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS06100 IPR000015 Outer membrane usher protein DOE60_RS06100 IPR037224 PapC, N-terminal domain superfamily DOE60_RS06105 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS06105 IPR018046 Pili assembly chaperone, conserved site DOE60_RS06105 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS06105 IPR001829 Pili assembly chaperone, bacterial DOE60_RS06105 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS06105 IPR013783 Immunoglobulin-like fold DOE60_RS06105 IPR008962 PapD-like superfamily DOE60_RS06110 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS06110 IPR000259 Fimbrial-type adhesion domain DOE60_RS06110 IPR008966 Adhesion domain superfamily DOE60_RS06125 IPR017853 Glycoside hydrolase superfamily DOE60_RS06125 IPR001223 Glycoside hydrolase family 18, catalytic domain DOE60_RS06125 IPR029070 Chitinase insertion domain superfamily DOE60_RS06125 IPR011583 Chitinase II DOE60_RS06145 IPR000847 Transcription regulator HTH, LysR DOE60_RS06145 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06145 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06145 IPR037416 Nodulation protein D, PBP2 DOE60_RS06145 IPR005119 LysR, substrate-binding DOE60_RS06150 IPR012724 Chaperone DnaJ DOE60_RS06150 IPR002939 Chaperone DnaJ, C-terminal DOE60_RS06150 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DOE60_RS06150 IPR018253 DnaJ domain, conserved site DOE60_RS06150 IPR036869 Chaperone J-domain superfamily DOE60_RS06150 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DOE60_RS06150 IPR001623 DnaJ domain DOE60_RS06150 IPR008971 HSP40/DnaJ peptide-binding DOE60_RS06155 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DOE60_RS06155 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DOE60_RS06155 IPR013126 Heat shock protein 70 family DOE60_RS06155 IPR018181 Heat shock protein 70, conserved site DOE60_RS06155 IPR012725 Chaperone DnaK DOE60_RS06160 IPR020240 Uncharacterised protein family UPF0412, YaaI DOE60_RS06165 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 DOE60_RS06165 IPR025217 Domain of unknown function DUF3944 DOE60_RS06170 IPR000791 Acetate transporter GPR1/FUN34/SatP family DOE60_RS06175 IPR001453 MoaB/Mog domain DOE60_RS06175 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE60_RS06175 IPR036425 MoaB/Mog-like domain superfamily DOE60_RS06180 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE60_RS06180 IPR013785 Aldolase-type TIM barrel DOE60_RS06180 IPR004730 Transaldolase type 1 DOE60_RS06180 IPR018225 Transaldolase, active site DOE60_RS06185 IPR001463 Sodium:alanine symporter DOE60_RS06190 IPR005583 Peroxide stress protein YaaA DOE60_RS06195 IPR004450 Threonine synthase-like DOE60_RS06195 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS06195 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE60_RS06195 IPR029144 Threonine synthase, N-terminal DOE60_RS06195 IPR037158 Threonine synthase, N-terminal domain superfamily DOE60_RS06195 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS06200 IPR000870 Homoserine kinase DOE60_RS06200 IPR006203 GHMP kinase, ATP-binding, conserved site DOE60_RS06200 IPR013750 GHMP kinase, C-terminal domain DOE60_RS06200 IPR036554 GHMP kinase, C-terminal domain superfamily DOE60_RS06200 IPR006204 GHMP kinase N-terminal domain DOE60_RS06200 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS06200 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS06205 IPR019811 Homoserine dehydrogenase, conserved site DOE60_RS06205 IPR027795 CASTOR, ACT domain DOE60_RS06205 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOE60_RS06205 IPR001341 Aspartate kinase DOE60_RS06205 IPR036291 NAD(P)-binding domain superfamily DOE60_RS06205 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOE60_RS06205 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS06205 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOE60_RS06205 IPR002912 ACT domain DOE60_RS06205 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS06205 IPR018042 Aspartate kinase, conserved site DOE60_RS06205 IPR001342 Homoserine dehydrogenase, catalytic DOE60_RS06210 IPR011720 Thr operon leader peptide DOE60_RS06215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS06215 IPR004384 RNA methyltransferase TrmJ/LasT DOE60_RS06215 IPR029028 Alpha/beta knot methyltransferases DOE60_RS06215 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS06230 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS06230 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS06230 IPR011006 CheY-like superfamily DOE60_RS06230 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS06230 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS06230 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06240 IPR018490 Cyclic nucleotide-binding-like DOE60_RS06240 IPR041687 IprA, winged helix-turn-helix domain DOE60_RS06240 IPR034719 Inhibitor of hydrogen peroxide resistance DOE60_RS06240 IPR000595 Cyclic nucleotide-binding domain DOE60_RS06250 IPR001829 Pili assembly chaperone, bacterial DOE60_RS06250 IPR018046 Pili assembly chaperone, conserved site DOE60_RS06250 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS06250 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS06250 IPR008962 PapD-like superfamily DOE60_RS06250 IPR013783 Immunoglobulin-like fold DOE60_RS06250 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS06255 IPR037224 PapC, N-terminal domain superfamily DOE60_RS06255 IPR025885 PapC, N-terminal domain DOE60_RS06255 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS06255 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS06255 IPR025949 PapC-like, C-terminal domain DOE60_RS06255 IPR000015 Outer membrane usher protein DOE60_RS06270 IPR010364 Uncharacterised protein family, inner membrane CreD DOE60_RS06275 IPR010364 Uncharacterised protein family, inner membrane CreD DOE60_RS06280 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS06280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS06280 IPR005467 Histidine kinase domain DOE60_RS06280 IPR003660 HAMP domain DOE60_RS06280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS06280 IPR029151 Periplasmic sensor-like domain superfamily DOE60_RS06280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS06280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS06285 IPR011006 CheY-like superfamily DOE60_RS06285 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS06285 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06285 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS06285 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS06285 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS06290 IPR010292 Uncharacterised protein family CreA DOE60_RS06295 IPR018062 HTH domain AraC-type, conserved site DOE60_RS06295 IPR011256 Regulatory factor, effector binding domain superfamily DOE60_RS06295 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS06295 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS06295 IPR009057 Homeobox-like domain superfamily DOE60_RS06295 IPR029442 GyrI-like small molecule binding domain DOE60_RS06295 IPR010499 Bacterial transcription activator, effector binding DOE60_RS06300 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE60_RS06300 IPR029033 Histidine phosphatase superfamily DOE60_RS06300 IPR023086 Phosphoglycerate mutase, GpmB, probable DOE60_RS06300 IPR013078 Histidine phosphatase superfamily, clade-1 DOE60_RS06305 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 DOE60_RS06305 IPR002786 Inosine/xanthosine triphosphatase DOE60_RS06305 IPR029001 Inosine triphosphate pyrophosphatase-like DOE60_RS06310 IPR038116 TrpR-like superfamily DOE60_RS06310 IPR010921 Trp repressor/replication initiator DOE60_RS06310 IPR013335 Trp repressor, bacterial DOE60_RS06310 IPR000831 Trp repressor DOE60_RS06315 IPR008939 Lytic transglycosylase, superhelical U-shaped DOE60_RS06315 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS06315 IPR008258 Transglycosylase SLT domain 1 DOE60_RS06315 IPR012289 Lytic transglycosylase, superhelical linker DOE60_RS06315 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily DOE60_RS06315 IPR023346 Lysozyme-like domain superfamily DOE60_RS06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06325 IPR022374 Energy-dependent translational throttle protein EttA DOE60_RS06325 IPR003439 ABC transporter-like DOE60_RS06325 IPR032781 ABC-transporter extension domain DOE60_RS06325 IPR003593 AAA+ ATPase domain DOE60_RS06325 IPR017871 ABC transporter, conserved site DOE60_RS06330 IPR006417 Nicotinamide-nucleotide adenylyltransferase DOE60_RS06330 IPR038727 NadR/Ttd14, AAA domain DOE60_RS06330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS06330 IPR004821 Cytidyltransferase-like domain DOE60_RS06330 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain DOE60_RS06330 IPR016429 NAD biosynthesis/regulator protein NadR DOE60_RS06330 IPR001387 Cro/C1-type helix-turn-helix domain DOE60_RS06330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06335 IPR003593 AAA+ ATPase domain DOE60_RS06335 IPR004504 DNA repair protein RadA DOE60_RS06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06335 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOE60_RS06335 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS06335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS06335 IPR041166 LapB, rubredoxin metal binding domain DOE60_RS06340 IPR036412 HAD-like superfamily DOE60_RS06340 IPR023190 Phosphoserine phosphatase, domain 2 DOE60_RS06340 IPR041449 Phosphoserine phosphatase, N-terminal DOE60_RS06340 IPR023214 HAD superfamily DOE60_RS06350 IPR019305 Uncharacterised protein family Smp DOE60_RS06355 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE60_RS06355 IPR023741 Lipoate-protein ligase A DOE60_RS06355 IPR019491 Lipoate protein ligase, C-terminal DOE60_RS06355 IPR004562 Lipoyltransferase/lipoate-protein ligase DOE60_RS06360 IPR010546 Protein of unknown function DUF1120 DOE60_RS06370 IPR008962 PapD-like superfamily DOE60_RS06370 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS06370 IPR013783 Immunoglobulin-like fold DOE60_RS06370 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS06375 IPR025949 PapC-like, C-terminal domain DOE60_RS06375 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS06375 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS06375 IPR037224 PapC, N-terminal domain superfamily DOE60_RS06375 IPR000015 Outer membrane usher protein DOE60_RS06375 IPR025885 PapC, N-terminal domain DOE60_RS06385 IPR035994 Nucleoside phosphorylase superfamily DOE60_RS06385 IPR004402 Purine nucleoside phosphorylase DeoD-type DOE60_RS06385 IPR018016 Nucleoside phosphorylase, conserved site DOE60_RS06385 IPR000845 Nucleoside phosphorylase domain DOE60_RS06390 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS06390 IPR010045 Phosphopentomutase DOE60_RS06390 IPR006124 Metalloenzyme DOE60_RS06390 IPR024052 Phosphopentomutase DeoB cap domain superfamily DOE60_RS06395 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE60_RS06395 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily DOE60_RS06395 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal DOE60_RS06395 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic DOE60_RS06395 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site DOE60_RS06395 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase DOE60_RS06395 IPR013465 Thymidine phosphorylase DOE60_RS06395 IPR000312 Glycosyl transferase, family 3 DOE60_RS06395 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE60_RS06395 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE60_RS06400 IPR002915 DeoC/FbaB/ lacD aldolase DOE60_RS06400 IPR023649 Deoxyribose-phosphate aldolase type II DOE60_RS06400 IPR013785 Aldolase-type TIM barrel DOE60_RS06400 IPR011343 Deoxyribose-phosphate aldolase DOE60_RS06405 IPR016905 Glycyl radical enzyme, HI0521, predicted DOE60_RS06410 IPR007197 Radical SAM DOE60_RS06410 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW DOE60_RS06410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS06410 IPR012839 Organic radical enzyme activase DOE60_RS06410 IPR034457 Organic radical-activating enzymes DOE60_RS06410 IPR013785 Aldolase-type TIM barrel DOE60_RS06410 IPR001989 Radical-activating enzyme, conserved site DOE60_RS06410 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS06415 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE60_RS06415 IPR032466 Metal-dependent hydrolase DOE60_RS06415 IPR001130 TatD family DOE60_RS06420 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE60_RS06420 IPR002641 Patatin-like phospholipase domain DOE60_RS06420 IPR037483 YjjU-like DOE60_RS06425 IPR009760 Protein of unknown function DUF1328 DOE60_RS06430 IPR007055 BON domain DOE60_RS06430 IPR014004 Transport-associated and nodulation domain, bacteria DOE60_RS06435 IPR032090 Peptide chain release factor 3, C-terminal DOE60_RS06435 IPR041732 Peptide chain release factor 3, GTP-binding domain DOE60_RS06435 IPR005225 Small GTP-binding protein domain DOE60_RS06435 IPR000795 Transcription factor, GTP-binding domain DOE60_RS06435 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS06435 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS06435 IPR031157 Tr-type G domain, conserved site DOE60_RS06435 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06435 IPR004548 Peptide chain release factor 3 DOE60_RS06435 IPR035647 EF-G domain III/V-like DOE60_RS06435 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DOE60_RS06440 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS06440 IPR036412 HAD-like superfamily DOE60_RS06440 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB DOE60_RS06440 IPR006439 HAD hydrolase, subfamily IA DOE60_RS06440 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS06440 IPR023214 HAD superfamily DOE60_RS06445 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS06445 IPR000182 GNAT domain DOE60_RS06445 IPR006464 N-acetyltransferase RimI/Ard1 DOE60_RS06450 IPR036654 DNA polymerase III, psi subunit superfamily DOE60_RS06450 IPR018382 DNA polymerase III, psi subunit, subgroup DOE60_RS06450 IPR004615 DNA polymerase III, psi subunit DOE60_RS06455 IPR013675 Methyltransferase small, N-terminal DOE60_RS06455 IPR007848 Methyltransferase small domain DOE60_RS06455 IPR023543 rRNA small subunit methyltransferase C DOE60_RS06455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS06455 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS06475 IPR009885 Protein of unknown function DUF1435 DOE60_RS06485 IPR008090 Ferric iron reductase DOE60_RS06485 IPR022770 Ferric iron reductase FhuF domain DOE60_RS06485 IPR024726 Ferric iron reductase, C-terminal DOE60_RS06490 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE60_RS06490 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE60_RS06495 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS06495 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS06495 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06500 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS06500 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS06505 IPR010619 Putative threonine/serine exporter DOE60_RS06510 IPR020914 Uncharacterised protein family UPF0442 DOE60_RS06510 IPR024528 Threonine/Serine exporter, ThrE DOE60_RS06515 IPR020917 Primosomal protein 1 DOE60_RS06515 IPR040480 DnaT, DNA-binding domain DOE60_RS06520 IPR003593 AAA+ ATPase domain DOE60_RS06520 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein DOE60_RS06520 IPR002611 IstB-like ATP-binding protein DOE60_RS06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06525 IPR019637 Protein of unknown function DUF2501 DOE60_RS06530 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS06530 IPR020881 Phosphoglycerol transferase I DOE60_RS06530 IPR000917 Sulfatase, N-terminal DOE60_RS06535 IPR035466 GlmS/AgaS, SIS domain 1 DOE60_RS06535 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOE60_RS06535 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS06535 IPR001347 Sugar isomerase (SIS) DOE60_RS06535 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS06535 IPR035490 GlmS/FrlB, SIS domain 2 DOE60_RS06540 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS06540 IPR035466 GlmS/AgaS, SIS domain 1 DOE60_RS06540 IPR035490 GlmS/FrlB, SIS domain 2 DOE60_RS06540 IPR001347 Sugar isomerase (SIS) DOE60_RS06540 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOE60_RS06540 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS06545 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE60_RS06550 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit DOE60_RS06555 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup DOE60_RS06555 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE60_RS06555 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE60_RS06565 IPR003593 AAA+ ATPase domain DOE60_RS06565 IPR011608 PRD domain DOE60_RS06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06565 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS06565 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS06565 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS06565 IPR036634 PRD domain superfamily DOE60_RS06570 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS06570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS06570 IPR003660 HAMP domain DOE60_RS06570 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS06570 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS06570 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS06575 IPR003706 CstA, N-terminal domain DOE60_RS06575 IPR025299 CstA, C-terminal domain DOE60_RS06580 IPR007423 Selenoprotein, putative DOE60_RS06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06585 IPR036627 CobW-like, C-terminal domain superfamily DOE60_RS06585 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE60_RS06585 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE60_RS06590 IPR007560 Restriction endonuclease type IV, Mrr DOE60_RS06590 IPR011335 Restriction endonuclease type II-like DOE60_RS06590 IPR025745 Restriction system protein Mrr-like N-terminal domain DOE60_RS06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06595 IPR006935 Helicase/UvrB, N-terminal DOE60_RS06595 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS06595 IPR029464 Type I restriction enzyme R protein, N-terminal domain DOE60_RS06595 IPR001650 Helicase, C-terminal DOE60_RS06595 IPR013670 EcoEI R protein C-terminal domain DOE60_RS06600 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DOE60_RS06600 IPR003356 DNA methylase, adenine-specific DOE60_RS06600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS06600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS06600 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DOE60_RS06610 IPR000055 Restriction endonuclease, type I, HsdS DOE60_RS06615 IPR020883 Type I toxin-antitoxin system, SymE toxin DOE60_RS06615 IPR014944 Toxin SymE-like DOE60_RS06615 IPR007159 SpoVT-AbrB domain DOE60_RS06635 IPR015590 Aldehyde dehydrogenase domain DOE60_RS06635 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS06635 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS06635 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS06635 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS06640 IPR010106 Recombination-promoting nuclease RpnA DOE60_RS06640 IPR006842 Transposase (putative), YhgA-like DOE60_RS06645 IPR011701 Major facilitator superfamily DOE60_RS06645 IPR005829 Sugar transporter, conserved site DOE60_RS06645 IPR020846 Major facilitator superfamily domain DOE60_RS06645 IPR036259 MFS transporter superfamily DOE60_RS06650 IPR007383 Protein of unknown function DUF445 DOE60_RS06655 IPR010645 Uncharacterised MFS-type transporter YbfB DOE60_RS06655 IPR036259 MFS transporter superfamily DOE60_RS06660 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE60_RS06665 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE60_RS06670 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS06670 IPR033826 Isoaspartyl-dipeptidase DOE60_RS06670 IPR006680 Amidohydrolase-related DOE60_RS06670 IPR010229 Peptidase M38, beta-aspartyl dipeptidase DOE60_RS06670 IPR032466 Metal-dependent hydrolase DOE60_RS06675 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06675 IPR000847 Transcription regulator HTH, LysR DOE60_RS06675 IPR005119 LysR, substrate-binding DOE60_RS06675 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06680 IPR001920 Asp/Glu racemase DOE60_RS06680 IPR033134 Asp/Glu racemase, active site 2 DOE60_RS06680 IPR004380 Aspartate racemase DOE60_RS06680 IPR015942 Asp/Glu/hydantoin racemase DOE60_RS06690 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS06690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS06690 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE60_RS06690 IPR002306 Tryptophan-tRNA ligase DOE60_RS06695 IPR011711 GntR, C-terminal DOE60_RS06695 IPR000524 Transcription regulator HTH, GntR DOE60_RS06695 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06695 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06695 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS06705 IPR005180 Domain of unknown function DUF302 DOE60_RS06705 IPR035923 TT1751-like domain superfamily DOE60_RS06705 IPR003691 Putative fluoride ion transporter CrcB DOE60_RS06735 IPR018654 Putative toxin of bacterial toxin-antitoxin pair DOE60_RS06740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS06740 IPR025714 Methyltransferase domain DOE60_RS06740 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type DOE60_RS06750 IPR026564 Transcriptional regulator TACO1-like, domain 3 DOE60_RS06750 IPR026562 Probable transcriptional regulatory protein YeeN DOE60_RS06750 IPR029072 YebC-like DOE60_RS06750 IPR002876 Transcriptional regulator TACO1-like DOE60_RS06750 IPR017856 Integrase-like, N-terminal DOE60_RS06780 IPR003439 ABC transporter-like DOE60_RS06780 IPR017871 ABC transporter, conserved site DOE60_RS06780 IPR003593 AAA+ ATPase domain DOE60_RS06780 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06780 IPR005895 ABC transporter, haem export, CcmA DOE60_RS06815 IPR009057 Homeobox-like domain superfamily DOE60_RS06815 IPR002514 Transposase IS3/IS911family DOE60_RS06825 IPR003346 Transposase, IS116/IS110/IS902 DOE60_RS06825 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal DOE60_RS06845 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS06845 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS06845 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE60_RS06845 IPR011032 GroES-like superfamily DOE60_RS06845 IPR036291 NAD(P)-binding domain superfamily DOE60_RS06845 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS06845 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS06850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS06850 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DOE60_RS06850 IPR031322 Shikimate kinase/gluconokinase DOE60_RS06855 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS06855 IPR036291 NAD(P)-binding domain superfamily DOE60_RS06855 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS06855 IPR011032 GroES-like superfamily DOE60_RS06860 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS06860 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS06860 IPR036291 NAD(P)-binding domain superfamily DOE60_RS06865 IPR003474 Gluconate transporter DOE60_RS06870 IPR000843 LacI-type HTH domain DOE60_RS06870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS06870 IPR028082 Periplasmic binding protein-like I DOE60_RS06875 IPR005495 Permease LptG/LptF-related DOE60_RS06875 IPR030923 LPS export ABC transporter permease LptG DOE60_RS06880 IPR005495 Permease LptG/LptF-related DOE60_RS06880 IPR030922 LPS export ABC transporter permease LptF DOE60_RS06895 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DOE60_RS06895 IPR023042 Peptidase M17, leucine aminopeptidase DOE60_RS06895 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOE60_RS06895 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOE60_RS06900 IPR036768 DNA polymerase III subunit chi superfamily DOE60_RS06900 IPR007459 DNA polymerase III chi subunit, HolC DOE60_RS06905 IPR002303 Valine-tRNA ligase DOE60_RS06905 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DOE60_RS06905 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE60_RS06905 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE60_RS06905 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS06905 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE60_RS06905 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE60_RS06905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS06905 IPR033705 Valyl tRNA synthetase, anticodon-binding domain DOE60_RS06905 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DOE60_RS06905 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS06910 IPR010295 Protein of unknown function DUF898 DOE60_RS06915 IPR000182 GNAT domain DOE60_RS06915 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS06920 IPR022061 Protein of unknown function DUF3617 DOE60_RS06935 IPR010386 tRNA-hydroxylase MiaE DOE60_RS06935 IPR009078 Ferritin-like superfamily DOE60_RS06935 IPR012347 Ferritin-like DOE60_RS06940 IPR009671 Regulator of ribonuclease activity B domain DOE60_RS06940 IPR036701 RraB-like superfamily DOE60_RS06940 IPR016716 Regulator of ribonuclease activity B DOE60_RS06945 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE60_RS06945 IPR024904 Ornithine carbamoyltransferase DOE60_RS06945 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE60_RS06945 IPR006130 Aspartate/ornithine carbamoyltransferase DOE60_RS06945 IPR002292 Ornithine/putrescine carbamoyltransferase DOE60_RS06945 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE60_RS06950 IPR037012 YhcH/YjgK/YiaL superfamily DOE60_RS06950 IPR004375 YhcH/YjgK/YiaL family DOE60_RS06960 IPR003876 Arginine deiminase DOE60_RS06965 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS06965 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS06965 IPR003964 Carbamate kinase DOE60_RS06970 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE60_RS06970 IPR002292 Ornithine/putrescine carbamoyltransferase DOE60_RS06970 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE60_RS06970 IPR024904 Ornithine carbamoyltransferase DOE60_RS06970 IPR006130 Aspartate/ornithine carbamoyltransferase DOE60_RS06970 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE60_RS06975 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE60_RS06980 IPR020900 Arginine repressor, DNA-binding domain DOE60_RS06980 IPR036251 Arginine repressor, C-terminal domain superfamily DOE60_RS06980 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS06980 IPR020899 Arginine repressor, C-terminal DOE60_RS06980 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS06980 IPR001669 Arginine repressor DOE60_RS06990 IPR012602 PyrBI operon leader peptide DOE60_RS06995 IPR002082 Aspartate carbamoyltransferase DOE60_RS06995 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE60_RS06995 IPR006130 Aspartate/ornithine carbamoyltransferase DOE60_RS06995 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE60_RS06995 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE60_RS07000 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DOE60_RS07000 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily DOE60_RS07000 IPR002801 Aspartate transcarbamylase regulatory subunit DOE60_RS07000 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DOE60_RS07000 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DOE60_RS07005 IPR019897 RidA, conserved site DOE60_RS07005 IPR006175 YjgF/YER057c/UK114 family DOE60_RS07005 IPR035959 RutC-like superfamily DOE60_RS07005 IPR006056 RidA family DOE60_RS07010 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS07010 IPR018303 P-type ATPase, phosphorylation site DOE60_RS07010 IPR036412 HAD-like superfamily DOE60_RS07010 IPR008250 P-type ATPase, A domain superfamily DOE60_RS07010 IPR004014 Cation-transporting P-type ATPase, N-terminal DOE60_RS07010 IPR006068 Cation-transporting P-type ATPase, C-terminal DOE60_RS07010 IPR023214 HAD superfamily DOE60_RS07010 IPR001757 P-type ATPase DOE60_RS07010 IPR006415 P-type ATPase, subfamily IIIB DOE60_RS07010 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS07015 IPR031434 MgtA leader peptide DOE60_RS07020 IPR012771 Trehalose operon repressor DOE60_RS07020 IPR028082 Periplasmic binding protein-like I DOE60_RS07020 IPR000843 LacI-type HTH domain DOE60_RS07020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS07025 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE60_RS07025 IPR001996 Phosphotransferase system, IIB component, type 1 DOE60_RS07025 IPR003352 Phosphotransferase system, EIIC DOE60_RS07025 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE60_RS07025 IPR011296 Phosphotransferase system, trehalose-specific IIBC component DOE60_RS07025 IPR036878 Glucose permease domain IIB DOE60_RS07025 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE60_RS07030 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS07030 IPR017853 Glycoside hydrolase superfamily DOE60_RS07030 IPR012769 Trehalose-6-phosphate hydrolase DOE60_RS07030 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS07030 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DOE60_RS07035 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE60_RS07035 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic DOE60_RS07035 IPR005144 ATP-cone domain DOE60_RS07035 IPR001150 Glycine radical domain DOE60_RS07040 IPR013785 Aldolase-type TIM barrel DOE60_RS07040 IPR034457 Organic radical-activating enzymes DOE60_RS07040 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic DOE60_RS07040 IPR001989 Radical-activating enzyme, conserved site DOE60_RS07040 IPR007197 Radical SAM DOE60_RS07045 IPR037914 SpoVT-AbrB domain superfamily DOE60_RS07045 IPR007159 SpoVT-AbrB domain DOE60_RS07050 IPR022907 VapC family DOE60_RS07050 IPR002716 PIN domain DOE60_RS07050 IPR029060 PIN-like domain superfamily DOE60_RS07055 IPR036634 PRD domain superfamily DOE60_RS07055 IPR007737 Mga helix-turn-helix domain DOE60_RS07055 IPR002178 PTS EIIA type-2 domain DOE60_RS07055 IPR036095 PTS system IIB component-like superfamily DOE60_RS07055 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS07055 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07055 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07055 IPR013196 Helix-turn-helix, type 11 DOE60_RS07055 IPR016152 Phosphotransferase/anion transporter DOE60_RS07055 IPR011608 PRD domain DOE60_RS07060 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase DOE60_RS07060 IPR013785 Aldolase-type TIM barrel DOE60_RS07065 IPR018319 L-seryl-tRNA selenium transferase-like DOE60_RS07065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS07065 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS07065 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like DOE60_RS07070 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS07070 IPR032466 Metal-dependent hydrolase DOE60_RS07070 IPR006680 Amidohydrolase-related DOE60_RS07070 IPR020043 Deacetylase Atu3266-like DOE60_RS07100 IPR010980 Cytochrome c/b562 DOE60_RS07100 IPR009155 Cytochrome b562 DOE60_RS07105 IPR036059 Metalloprotease TldD/PmbA superfamily DOE60_RS07105 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOE60_RS07105 IPR002510 Metalloprotease TldD/PmbA DOE60_RS07110 IPR006839 Ribosome-associated, YjgA DOE60_RS07110 IPR023153 PSPTO4464-like domain superfamily DOE60_RS07115 IPR004101 Mur ligase, C-terminal DOE60_RS07115 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS07115 IPR005757 Murein peptide ligase DOE60_RS07115 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS07115 IPR000713 Mur ligase, N-terminal catalytic domain DOE60_RS07115 IPR013221 Mur ligase, central DOE60_RS07120 IPR020548 Fructose-1,6-bisphosphatase, active site DOE60_RS07120 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal DOE60_RS07120 IPR000146 Fructose-1,6-bisphosphatase class 1 DOE60_RS07120 IPR028343 Fructose-1,6-bisphosphatase DOE60_RS07125 IPR001851 ABC transporter, permease DOE60_RS07130 IPR001851 ABC transporter, permease DOE60_RS07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07135 IPR003593 AAA+ ATPase domain DOE60_RS07135 IPR017871 ABC transporter, conserved site DOE60_RS07135 IPR003439 ABC transporter-like DOE60_RS07140 IPR033893 ABC transporter periplasmic-binding protein YtfQ DOE60_RS07140 IPR025997 Periplasmic binding protein DOE60_RS07140 IPR028082 Periplasmic binding protein-like I DOE60_RS07145 IPR008162 Inorganic pyrophosphatase DOE60_RS07145 IPR036649 Inorganic pyrophosphatase superfamily DOE60_RS07150 IPR013024 Gamma-glutamyl cyclotransferase-like DOE60_RS07150 IPR039126 Gamma-glutamylaminecyclotransferase DOE60_RS07150 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DOE60_RS07150 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DOE60_RS07155 IPR007452 Translocation and assembly module TamB DOE60_RS07160 IPR035243 TamA, POTRA domain 1 DOE60_RS07160 IPR010827 POTRA domain, BamA/TamA-like DOE60_RS07160 IPR034746 POTRA domain DOE60_RS07160 IPR000184 Bacterial surface antigen (D15) DOE60_RS07160 IPR039910 Surface antigen D15-like DOE60_RS07165 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DOE60_RS07165 IPR002569 Peptide methionine sulphoxide reductase MsrA DOE60_RS07170 IPR005170 Transporter-associated domain DOE60_RS07170 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS07170 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS07170 IPR000644 CBS domain DOE60_RS07170 IPR002550 CNNM, transmembrane domain DOE60_RS07175 IPR009491 Protein of unknown function DUF1107 DOE60_RS07185 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DOE60_RS07190 IPR020550 Inositol monophosphatase, conserved site DOE60_RS07190 IPR000760 Inositol monophosphatase-like DOE60_RS07190 IPR020583 Inositol monophosphatase, metal-binding site DOE60_RS07190 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ DOE60_RS07195 IPR006179 5'-Nucleotidase/apyrase DOE60_RS07195 IPR006146 5'-Nucleotidase, conserved site DOE60_RS07195 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase DOE60_RS07195 IPR041827 CpdB, N-terminal metallophosphatase domain DOE60_RS07195 IPR008334 5'-Nucleotidase, C-terminal DOE60_RS07195 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE60_RS07195 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS07195 IPR029052 Metallo-dependent phosphatase-like DOE60_RS07200 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07200 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07200 IPR002577 Helix-turn-helix, HxlR type DOE60_RS07205 IPR008030 NmrA-like domain DOE60_RS07205 IPR036291 NAD(P)-binding domain superfamily DOE60_RS07210 IPR000620 EamA domain DOE60_RS07215 IPR023742 Iron-sulfur cluster repair protein YftE DOE60_RS07215 IPR012312 Haemerythrin-like DOE60_RS07215 IPR019903 Repair of iron centres family DOE60_RS07220 IPR004840 Amino acid permease, conserved site DOE60_RS07220 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS07225 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS07225 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOE60_RS07225 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOE60_RS07235 IPR007340 Opacity-associated protein A DOE60_RS07235 IPR013731 Opacity-associated protein A, N-terminal DOE60_RS07245 IPR000244 Ribosomal protein L9 DOE60_RS07245 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DOE60_RS07245 IPR020070 Ribosomal protein L9, N-terminal DOE60_RS07245 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DOE60_RS07245 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DOE60_RS07245 IPR020069 Ribosomal protein L9, C-terminal DOE60_RS07245 IPR020594 Ribosomal protein L9, bacteria/chloroplast DOE60_RS07250 IPR018275 Ribosomal protein S18, conserved site DOE60_RS07250 IPR036870 Ribosomal protein S18 superfamily DOE60_RS07250 IPR001648 Ribosomal protein S18 DOE60_RS07255 IPR000424 Primosome PriB/single-strand DNA-binding DOE60_RS07255 IPR023646 Primosomal replication protein PriB DOE60_RS07255 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS07260 IPR000529 Ribosomal protein S6 DOE60_RS07260 IPR020814 Ribosomal protein S6, plastid/chloroplast DOE60_RS07260 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DOE60_RS07260 IPR035980 Ribosomal protein S6 superfamily DOE60_RS07260 IPR020815 Ribosomal protein S6, conserved site DOE60_RS07270 IPR036275 YdgH-like superfamily DOE60_RS07270 IPR025543 Dodecin-like DOE60_RS07270 IPR010854 Domain of unknown function DUF1471 DOE60_RS07275 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS07275 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS07275 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF DOE60_RS07280 IPR004560 L-ribulose-5-phosphate 3-epimerase DOE60_RS07280 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae DOE60_RS07280 IPR036237 Xylose isomerase-like superfamily DOE60_RS07280 IPR013022 Xylose isomerase-like, TIM barrel domain DOE60_RS07285 IPR041710 HPS/KGPDC domain DOE60_RS07285 IPR011060 Ribulose-phosphate binding barrel DOE60_RS07285 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE60_RS07285 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD DOE60_RS07285 IPR013785 Aldolase-type TIM barrel DOE60_RS07290 IPR016152 Phosphotransferase/anion transporter DOE60_RS07290 IPR002178 PTS EIIA type-2 domain DOE60_RS07295 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS07295 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS07295 IPR036095 PTS system IIB component-like superfamily DOE60_RS07300 IPR004703 Phosphotransferase system, sugar-specific permease component DOE60_RS07305 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS07305 IPR023951 L-ascorbate-6-phosphate lactonase UlaG DOE60_RS07310 IPR014036 DeoR C-terminal sensor domain DOE60_RS07310 IPR001034 DeoR-type HTH domain DOE60_RS07310 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS07310 IPR023711 Transcription regulator HTH, UlaR DOE60_RS07310 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07310 IPR037171 NagB/RpiA transferase-like DOE60_RS07315 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOE60_RS07315 IPR029058 Alpha/Beta hydrolase fold DOE60_RS07320 IPR025543 Dodecin-like DOE60_RS07320 IPR010854 Domain of unknown function DUF1471 DOE60_RS07320 IPR036275 YdgH-like superfamily DOE60_RS07325 IPR010854 Domain of unknown function DUF1471 DOE60_RS07325 IPR036275 YdgH-like superfamily DOE60_RS07325 IPR025543 Dodecin-like DOE60_RS07330 IPR034184 Putative acyl-CoA dehydrogenase AidB DOE60_RS07330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE60_RS07330 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE60_RS07330 IPR006089 Acyl-CoA dehydrogenase, conserved site DOE60_RS07330 IPR041504 Adaptive response protein AidB, N-terminal DOE60_RS07330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE60_RS07330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE60_RS07335 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE60_RS07335 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS07340 IPR009576 Biofilm formation YgiB DOE60_RS07345 IPR007140 Protein of unknown function DUF350 DOE60_RS07350 IPR019621 Protein of unknown function DUF2491 DOE60_RS07360 IPR007157 PspA/IM30 DOE60_RS07365 IPR019231 Protein of unknown function DUF2170 DOE60_RS07370 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOE60_RS07370 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS07370 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DOE60_RS07370 IPR004441 RNA methyltransferase TrmH family DOE60_RS07370 IPR029028 Alpha/beta knot methyltransferases DOE60_RS07370 IPR029064 50S ribosomal protein L30e-like DOE60_RS07370 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS07375 IPR003029 S1 domain DOE60_RS07375 IPR011805 Ribonuclease R DOE60_RS07375 IPR004476 Ribonuclease II/ribonuclease R DOE60_RS07375 IPR022967 RNA-binding domain, S1 DOE60_RS07375 IPR013223 Ribonuclease B, N-terminal OB domain DOE60_RS07375 IPR022966 Ribonuclease II/R, conserved site DOE60_RS07375 IPR001900 Ribonuclease II/R DOE60_RS07375 IPR040476 RNase II/RNase R, cold shock domain DOE60_RS07375 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS07375 IPR013668 Ribonuclease R winged-helix domain DOE60_RS07375 IPR011129 Cold shock domain DOE60_RS07380 IPR000944 Transcription regulator Rrf2-type DOE60_RS07380 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07380 IPR023761 Transcriptional repressor HTH, NsrR DOE60_RS07380 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07390 IPR018220 Adenylosuccinate synthase, GTP-binding site DOE60_RS07390 IPR033128 Adenylosuccinate synthase, active site DOE60_RS07390 IPR042110 Adenylosuccinate synthetase, domain 2 DOE60_RS07390 IPR042111 Adenylosuccinate synthetase, domain 3 DOE60_RS07390 IPR001114 Adenylosuccinate synthetase DOE60_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07390 IPR042109 Adenylosuccinate synthetase, domain 1 DOE60_RS07395 IPR019201 Protein of unknown function DUF2065 DOE60_RS07400 IPR010200 HflC DOE60_RS07400 IPR036013 Band 7/SPFH domain superfamily DOE60_RS07400 IPR001107 Band 7 domain DOE60_RS07405 IPR001107 Band 7 domain DOE60_RS07405 IPR010201 HflK DOE60_RS07405 IPR001972 Stomatin family DOE60_RS07405 IPR036013 Band 7/SPFH domain superfamily DOE60_RS07405 IPR020980 Menbrane protein HflK, N-terminal DOE60_RS07410 IPR035647 EF-G domain III/V-like DOE60_RS07410 IPR030394 HflX-type guanine nucleotide-binding (G) domain DOE60_RS07410 IPR016496 GTPase HflX DOE60_RS07410 IPR032305 GTP-binding protein, middle domain DOE60_RS07410 IPR006073 GTP binding domain DOE60_RS07410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07410 IPR042108 GTPase HflX, N-terminal domain superfamily DOE60_RS07410 IPR025121 GTPase HflX, N-terminal DOE60_RS07415 IPR010920 LSM domain superfamily DOE60_RS07415 IPR005001 RNA-binding protein Hfq DOE60_RS07420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07420 IPR018022 IPP transferase DOE60_RS07420 IPR039657 Dimethylallyltransferase DOE60_RS07430 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE60_RS07435 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DOE60_RS07435 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07440 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr DOE60_RS07440 IPR004443 YjeF N-terminal domain DOE60_RS07440 IPR017953 Carbohydrate kinase, predicted, conserved site DOE60_RS07440 IPR029056 Ribokinase-like DOE60_RS07440 IPR036652 YjeF N-terminal domain superfamily DOE60_RS07440 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DOE60_RS07445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS07445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS07445 IPR013542 Domain of unknown function DUF1730 DOE60_RS07445 IPR004453 Epoxyqueuosine reductase QueG DOE60_RS07465 IPR001320 Ionotropic glutamate receptor DOE60_RS07465 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS07465 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS07465 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE60_RS07470 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE60_RS07470 IPR012337 Ribonuclease H-like superfamily DOE60_RS07470 IPR036397 Ribonuclease H superfamily DOE60_RS07470 IPR022894 Oligoribonuclease DOE60_RS07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07475 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DOE60_RS07475 IPR004881 Ribosome biogenesis GTPase RsgA DOE60_RS07475 IPR010914 RsgA GTPase domain DOE60_RS07480 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 DOE60_RS07480 IPR033177 Phosphatidylserine decarboxylase DOE60_RS07480 IPR003817 Phosphatidylserine decarboxylase-related DOE60_RS07485 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS07485 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS07485 IPR024393 Mechanosensitive ion channel MscS, porin domain DOE60_RS07485 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS07485 IPR006685 Mechanosensitive ion channel MscS DOE60_RS07485 IPR010920 LSM domain superfamily DOE60_RS07485 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE60_RS07485 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DOE60_RS07490 IPR002293 Amino acid/polyamine transporter I DOE60_RS07495 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOE60_RS07495 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE60_RS07495 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS07495 IPR004525 Elongation factor P--(R)-beta-lysine ligase DOE60_RS07500 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DOE60_RS07500 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE60_RS07500 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DOE60_RS07500 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE60_RS07500 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE60_RS07500 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS07500 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE60_RS07500 IPR005884 Fumarate reductase, flavoprotein subunit DOE60_RS07505 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS07505 IPR012675 Beta-grasp domain superfamily DOE60_RS07505 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE60_RS07505 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS07505 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DOE60_RS07505 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DOE60_RS07505 IPR009051 Alpha-helical ferredoxin DOE60_RS07505 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS07505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS07510 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE60_RS07510 IPR003510 Fumarate reductase, subunit C DOE60_RS07515 IPR003418 Fumarate reductase, subunit D DOE60_RS07515 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE60_RS07520 IPR012674 Calycin DOE60_RS07520 IPR022272 Lipocalin family conserved site DOE60_RS07520 IPR000566 Lipocalin/cytosolic fatty-acid binding domain DOE60_RS07520 IPR002446 Lipocalin, bacterial DOE60_RS07520 IPR022271 Lipocalin, ApoD type DOE60_RS07525 IPR000390 Small multidrug resistance protein family DOE60_RS07530 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS07530 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS07530 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS07535 IPR012556 Entericidin A/B DOE60_RS07540 IPR012556 Entericidin A/B DOE60_RS07545 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS07545 IPR013852 Translation elongation factor P/YeiP, conserved site DOE60_RS07545 IPR001059 Translation elongation factor P/YeiP, central DOE60_RS07545 IPR013185 Translation elongation factor, KOW-like DOE60_RS07545 IPR020599 Translation elongation factor P/YeiP DOE60_RS07545 IPR014722 Ribosomal protein L2, domain 2 DOE60_RS07545 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS07545 IPR015365 Elongation factor P, C-terminal DOE60_RS07545 IPR011768 Translation elongation factor P DOE60_RS07550 IPR013785 Aldolase-type TIM barrel DOE60_RS07550 IPR007197 Radical SAM DOE60_RS07550 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DOE60_RS07550 IPR022462 Lysine-2,3-aminomutase-like DOE60_RS07555 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS07555 IPR009722 SdiA-regulated DOE60_RS07575 IPR003467 Fimbrial, major/minor subunit DOE60_RS07585 IPR035191 K88 minor fimbrial subunit FaeF DOE60_RS07590 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS07590 IPR018046 Pili assembly chaperone, conserved site DOE60_RS07590 IPR013783 Immunoglobulin-like fold DOE60_RS07590 IPR001829 Pili assembly chaperone, bacterial DOE60_RS07590 IPR008962 PapD-like superfamily DOE60_RS07590 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS07595 IPR000015 Outer membrane usher protein DOE60_RS07595 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS07595 IPR025885 PapC, N-terminal domain DOE60_RS07595 IPR037224 PapC, N-terminal domain superfamily DOE60_RS07595 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS07600 IPR008966 Adhesion domain superfamily DOE60_RS07600 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS07600 IPR016372 K88 fimbrial protein A DOE60_RS07605 IPR004356 Adhesin operon regulatory protein DOE60_RS07610 IPR006793 FaeA-like protein DOE60_RS07610 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07610 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07620 IPR002686 Transposase IS200-like DOE60_RS07620 IPR036515 Transposase IS200-like superfamily DOE60_RS07625 IPR031810 YjeJ-like DOE60_RS07630 IPR025294 Protein of unknown function DUF4156 DOE60_RS07635 IPR018370 Chaperonin Cpn60, conserved site DOE60_RS07635 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DOE60_RS07635 IPR002423 Chaperonin Cpn60/TCP-1 family DOE60_RS07635 IPR027409 GroEL-like apical domain superfamily DOE60_RS07635 IPR027413 GroEL-like equatorial domain superfamily DOE60_RS07635 IPR001844 Chaperonin Cpn60 DOE60_RS07640 IPR011032 GroES-like superfamily DOE60_RS07640 IPR018369 Chaperonin GroES, conserved site DOE60_RS07640 IPR037124 GroES chaperonin superfamily DOE60_RS07640 IPR020818 GroES chaperonin family DOE60_RS07645 IPR002293 Amino acid/polyamine transporter I DOE60_RS07650 IPR007313 FxsA cytoplasmic membrane protein DOE60_RS07655 IPR024083 Fumarase/histidase, N-terminal DOE60_RS07655 IPR008948 L-Aspartase-like DOE60_RS07655 IPR004708 Aspartate ammonia-lyase DOE60_RS07655 IPR000362 Fumarate lyase family DOE60_RS07655 IPR018951 Fumarase C, C-terminal DOE60_RS07655 IPR022761 Fumarate lyase, N-terminal DOE60_RS07655 IPR020557 Fumarate lyase, conserved site DOE60_RS07660 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE60_RS07665 IPR004323 Divalent ion tolerance protein, CutA DOE60_RS07665 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria DOE60_RS07665 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE60_RS07665 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE60_RS07670 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DOE60_RS07670 IPR035671 DsbD gamma DOE60_RS07670 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DOE60_RS07670 IPR022910 Thiol:disulphide interchange protein DsbD DOE60_RS07670 IPR036249 Thioredoxin-like superfamily DOE60_RS07670 IPR013766 Thioredoxin domain DOE60_RS07670 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DOE60_RS07670 IPR017937 Thioredoxin, conserved site DOE60_RS07675 IPR009057 Homeobox-like domain superfamily DOE60_RS07675 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS07675 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS07685 IPR025166 Integrase, DNA-binding domain DOE60_RS07685 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS07685 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS07685 IPR002104 Integrase, catalytic domain DOE60_RS07685 IPR010998 Integrase/recombinase, N-terminal DOE60_RS07685 IPR038488 Integrase, DNA-binding domain superfamily DOE60_RS07690 IPR001845 HTH ArsR-type DNA-binding domain DOE60_RS07690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07690 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS07690 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS07695 IPR005509 A-factor biosynthesis hotdog domain DOE60_RS07700 IPR036396 Cytochrome P450 superfamily DOE60_RS07700 IPR017972 Cytochrome P450, conserved site DOE60_RS07700 IPR002397 Cytochrome P450, B-class DOE60_RS07700 IPR001128 Cytochrome P450 DOE60_RS07725 IPR026866 Protein CR006, P-loop domain DOE60_RS07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07770 IPR018062 HTH domain AraC-type, conserved site DOE60_RS07770 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS07770 IPR009057 Homeobox-like domain superfamily DOE60_RS07770 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS07775 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS07775 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS07790 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS07790 IPR009722 SdiA-regulated DOE60_RS07800 IPR026269 Tat proofreading chaperone DmsD-type DOE60_RS07800 IPR028611 Tat proofreading chaperone DmsD DOE60_RS07800 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS07800 IPR036411 TorD-like superfamily DOE60_RS07805 IPR007059 DMSO reductase anchor subunit (DmsC) DOE60_RS07810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS07810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS07810 IPR014297 Dimethylsulphoxide reductase, chain B DOE60_RS07815 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS07815 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS07815 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS07815 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS07815 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS07815 IPR006656 Molybdopterin oxidoreductase DOE60_RS07815 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS07815 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE60_RS07815 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS07820 IPR013767 PAS fold DOE60_RS07820 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB DOE60_RS07820 IPR039506 SpoOB, alpha-helical domain DOE60_RS07820 IPR029151 Periplasmic sensor-like domain superfamily DOE60_RS07820 IPR033463 Single cache domain 3 DOE60_RS07820 IPR035965 PAS domain superfamily DOE60_RS07820 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS07820 IPR005467 Histidine kinase domain DOE60_RS07820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS07820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS07820 IPR000014 PAS domain DOE60_RS07825 IPR024187 Signal transduction response regulator, citrate/malate metabolism DOE60_RS07825 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS07825 IPR011006 CheY-like superfamily DOE60_RS07835 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE60_RS07840 IPR011167 Iron-dependent fumarate hydratase DOE60_RS07840 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE60_RS07840 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE60_RS07840 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE60_RS07840 IPR020557 Fumarate lyase, conserved site DOE60_RS07845 IPR022616 Glycosyl hydrolase, family 4, C-terminal DOE60_RS07845 IPR019802 Glycoside hydrolase, family 4, conserved site DOE60_RS07845 IPR001088 Glycoside hydrolase, family 4 DOE60_RS07845 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE60_RS07845 IPR036291 NAD(P)-binding domain superfamily DOE60_RS07850 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS07850 IPR018062 HTH domain AraC-type, conserved site DOE60_RS07850 IPR011051 RmlC-like cupin domain superfamily DOE60_RS07850 IPR014710 RmlC-like jelly roll fold DOE60_RS07850 IPR009057 Homeobox-like domain superfamily DOE60_RS07850 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS07850 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily DOE60_RS07855 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS07855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS07855 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE60_RS07855 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE60_RS07855 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE60_RS07855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS07855 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE60_RS07855 IPR011193 Ornithine/lysine/arginine decarboxylase DOE60_RS07860 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS07860 IPR018062 HTH domain AraC-type, conserved site DOE60_RS07860 IPR009057 Homeobox-like domain superfamily DOE60_RS07860 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS07865 IPR002293 Amino acid/polyamine transporter I DOE60_RS07870 IPR000917 Sulfatase, N-terminal DOE60_RS07870 IPR040423 Phosphoethanolamine transferase DOE60_RS07870 IPR012549 Phosphoethanolamine transferase, N-terminal DOE60_RS07870 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS07875 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS07875 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS07875 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS07875 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS07875 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS07875 IPR011006 CheY-like superfamily DOE60_RS07880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS07880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS07880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS07880 IPR005467 Histidine kinase domain DOE60_RS07880 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS07880 IPR003660 HAMP domain DOE60_RS07880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS07890 IPR015041 Osmosensory transporter coiled coil DOE60_RS07890 IPR020846 Major facilitator superfamily domain DOE60_RS07890 IPR005828 Major facilitator, sugar transporter-like DOE60_RS07890 IPR036259 MFS transporter superfamily DOE60_RS07890 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS07890 IPR005829 Sugar transporter, conserved site DOE60_RS07890 IPR036292 Proline/betaine transporter ProP, C-terminal DOE60_RS07895 IPR013988 PhnA protein, C-terminal DOE60_RS07895 IPR004624 PhnA protein DOE60_RS07895 IPR013987 PhnA protein, N-terminal DOE60_RS07900 IPR028973 PhnB-like DOE60_RS07900 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE60_RS07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07905 IPR012693 ABC transporter, phosphonate import, PhnC DOE60_RS07905 IPR017871 ABC transporter, conserved site DOE60_RS07905 IPR003439 ABC transporter-like DOE60_RS07905 IPR003593 AAA+ ATPase domain DOE60_RS07910 IPR017797 Phosphonate ABC transporter, substrate-binding protein DOE60_RS07910 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein DOE60_RS07915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS07915 IPR035906 MetI-like superfamily DOE60_RS07915 IPR005769 ABC transporter, permease PhnE/PtxC DOE60_RS07920 IPR009609 Phosphonate metabolism PhnG DOE60_RS07925 IPR008772 Bacterial phosphonate metabolism, PhnH DOE60_RS07925 IPR038058 PhnH-like superfamily DOE60_RS07930 IPR008773 Phosphonate metabolism protein PhnI DOE60_RS07935 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase DOE60_RS07940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07940 IPR012700 Phosphonate C-P lyase system, PhnK DOE60_RS07940 IPR017871 ABC transporter, conserved site DOE60_RS07940 IPR003439 ABC transporter-like DOE60_RS07940 IPR003593 AAA+ ATPase domain DOE60_RS07945 IPR017871 ABC transporter, conserved site DOE60_RS07945 IPR012701 Phosphonate C-P lyase system, PhnL DOE60_RS07945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07945 IPR003593 AAA+ ATPase domain DOE60_RS07945 IPR003439 ABC transporter-like DOE60_RS07950 IPR013108 Amidohydrolase 3 DOE60_RS07950 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS07950 IPR032466 Metal-dependent hydrolase DOE60_RS07950 IPR012696 Phosphonate metabolism PhnM DOE60_RS07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS07955 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN DOE60_RS07955 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE60_RS07960 IPR000182 GNAT domain DOE60_RS07960 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS07965 IPR017693 Phosphonate metabolism protein PhnP DOE60_RS07965 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS07965 IPR001279 Metallo-beta-lactamase DOE60_RS07965 IPR035682 Phosphonate metabolism protein, MBL domain DOE60_RS07970 IPR029229 Alkyl sulfatase, C-terminal DOE60_RS07970 IPR029228 Alkyl sulfatase dimerisation domain DOE60_RS07970 IPR001279 Metallo-beta-lactamase DOE60_RS07970 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily DOE60_RS07970 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS07970 IPR036527 SCP2 sterol-binding domain superfamily DOE60_RS07975 IPR031381 Uncharacterised protein YtcA DOE60_RS07980 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS07980 IPR030196 Multidrug resistance protein MdtN DOE60_RS07980 IPR005694 Efflux pump membrane protein DOE60_RS07985 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE60_RS07990 IPR003423 Outer membrane efflux protein DOE60_RS07990 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE60_RS08000 IPR006597 Sel1-like repeat DOE60_RS08000 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS08005 IPR034703 Proton/glutamate-aspartate symporter GltP DOE60_RS08005 IPR033380 Glutamate-aspartate symport protein GltP/GltT DOE60_RS08005 IPR001991 Sodium:dicarboxylate symporter DOE60_RS08005 IPR018107 Sodium:dicarboxylate symporter, conserved site DOE60_RS08005 IPR036458 Sodium:dicarboxylate symporter superfamily DOE60_RS08010 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS08010 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS08010 IPR019734 Tetratricopeptide repeat DOE60_RS08020 IPR005614 NrfD family DOE60_RS08020 IPR017566 NrfD DOE60_RS08025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS08025 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS08025 IPR017567 Cytochrome c nitrite reductase, Fe-S protein DOE60_RS08025 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS08025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS08030 IPR011031 Multihaem cytochrome DOE60_RS08030 IPR023155 Cytochrome c-552/4 DOE60_RS08030 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit DOE60_RS08030 IPR010177 Doubled CXXCH motif DOE60_RS08030 IPR036280 Multiheme cytochrome superfamily DOE60_RS08035 IPR011031 Multihaem cytochrome DOE60_RS08035 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit DOE60_RS08035 IPR003321 Cytochrome c552 DOE60_RS08035 IPR036280 Multiheme cytochrome superfamily DOE60_RS08045 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DOE60_RS08045 IPR011904 Acetate-CoA ligase DOE60_RS08045 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS08045 IPR000873 AMP-dependent synthetase/ligase DOE60_RS08045 IPR020845 AMP-binding, conserved site DOE60_RS08045 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS08060 IPR018212 Sodium/solute symporter, conserved site DOE60_RS08060 IPR014083 Cation/acetate symporter ActP DOE60_RS08060 IPR038377 Sodium/glucose symporter superfamily DOE60_RS08060 IPR001734 Sodium/solute symporter DOE60_RS08065 IPR005261 Conserved hypothetical protein CHP00659 DOE60_RS08065 IPR007300 CidB/LrgB family DOE60_RS08070 IPR023760 Holin-like protein CidA DOE60_RS08070 IPR005538 LrgA/CidA family DOE60_RS08075 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08075 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08075 IPR005119 LysR, substrate-binding DOE60_RS08075 IPR000847 Transcription regulator HTH, LysR DOE60_RS08080 IPR006153 Cation/H+ exchanger DOE60_RS08080 IPR018422 Cation/H+ exchanger, CPA1 family DOE60_RS08080 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria DOE60_RS08080 IPR038770 Sodium/solute symporter superfamily DOE60_RS08090 IPR006043 Xanthine/uracil/vitamin C permease DOE60_RS08100 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS08100 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS08100 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS08100 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS08100 IPR036249 Thioredoxin-like superfamily DOE60_RS08105 IPR000551 MerR-type HTH domain DOE60_RS08105 IPR010211 Redox-sensitive transcriptional activator SoxR DOE60_RS08105 IPR015358 Transcription regulator MerR, DNA binding DOE60_RS08105 IPR009061 Putative DNA-binding domain superfamily DOE60_RS08110 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS08110 IPR018062 HTH domain AraC-type, conserved site DOE60_RS08110 IPR009057 Homeobox-like domain superfamily DOE60_RS08110 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS08115 IPR001633 EAL domain DOE60_RS08115 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE60_RS08115 IPR035919 EAL domain superfamily DOE60_RS08120 IPR016958 Uncharacterised conserved protein UCP030798 DOE60_RS08125 IPR011917 ABC transporter, lipid A export, MsbA DOE60_RS08125 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS08125 IPR003439 ABC transporter-like DOE60_RS08125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08125 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS08125 IPR017871 ABC transporter, conserved site DOE60_RS08125 IPR003593 AAA+ ATPase domain DOE60_RS08155 IPR000424 Primosome PriB/single-strand DNA-binding DOE60_RS08155 IPR011344 Single-stranded DNA-binding protein DOE60_RS08155 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS08165 IPR004602 UvrABC system subunit A DOE60_RS08165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08165 IPR003439 ABC transporter-like DOE60_RS08165 IPR017871 ABC transporter, conserved site DOE60_RS08165 IPR041102 UvrA, interaction domain DOE60_RS08165 IPR041552 UvrA DNA-binding domain DOE60_RS08180 IPR038056 YjbR-like superfamily DOE60_RS08180 IPR007351 Uncharacterised protein YjbR DOE60_RS08185 IPR035917 YjbQ-like superfamily DOE60_RS08185 IPR001602 Uncharacterised protein family UPF0047 DOE60_RS08190 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA DOE60_RS08190 IPR005519 Acid phosphatase, class B-like DOE60_RS08190 IPR023214 HAD superfamily DOE60_RS08190 IPR036412 HAD-like superfamily DOE60_RS08195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS08195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS08195 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS08195 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE60_RS08195 IPR000796 Aspartate/other aminotransferase DOE60_RS08195 IPR004839 Aminotransferase, class I/classII DOE60_RS08200 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE60_RS08200 IPR029066 PLP-binding barrel DOE60_RS08200 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DOE60_RS08200 IPR001608 Alanine racemase, N-terminal DOE60_RS08200 IPR011079 Alanine racemase, C-terminal DOE60_RS08200 IPR000821 Alanine racemase DOE60_RS08205 IPR003593 AAA+ ATPase domain DOE60_RS08205 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DOE60_RS08205 IPR007692 DNA helicase, DnaB type DOE60_RS08205 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE60_RS08205 IPR007693 DNA helicase, DnaB-like, N-terminal DOE60_RS08205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08205 IPR007694 DNA helicase, DnaB-like, C-terminal DOE60_RS08210 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS08210 IPR036291 NAD(P)-binding domain superfamily DOE60_RS08210 IPR011032 GroES-like superfamily DOE60_RS08210 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS08210 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DOE60_RS08210 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS08215 IPR014318 Phage shock protein, PspG DOE60_RS08220 IPR013785 Aldolase-type TIM barrel DOE60_RS08220 IPR035587 DUS-like, FMN-binding domain DOE60_RS08220 IPR004653 tRNA-dihydrouridine(20/20a) synthase DOE60_RS08220 IPR001269 tRNA-dihydrouridine synthase DOE60_RS08220 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE60_RS08230 IPR002481 Ferric-uptake regulator DOE60_RS08230 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08230 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08235 IPR036629 YjbJ superfamily DOE60_RS08235 IPR008462 CsbD-like domain DOE60_RS08235 IPR026042 Stress response protein YjbJ DOE60_RS08245 IPR002528 Multi antimicrobial extrusion protein DOE60_RS08250 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08250 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08250 IPR015927 Peptidase S24/S26A/S26B/S26C DOE60_RS08250 IPR006199 LexA repressor, DNA-binding domain DOE60_RS08250 IPR006197 Peptidase S24, LexA-like DOE60_RS08250 IPR036286 LexA/Signal peptidase-like superfamily DOE60_RS08250 IPR039418 LexA-like DOE60_RS08250 IPR006200 Transcription regulator LexA DOE60_RS08255 IPR000829 DAGK family DOE60_RS08255 IPR033718 Diacylglycerol kinase, prokaryotic DOE60_RS08255 IPR036945 Diacylglycerol kinase (DAGK) superfamily DOE60_RS08260 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase DOE60_RS08260 IPR002123 Phospholipid/glycerol acyltransferase DOE60_RS08260 IPR041728 GPAT/DHAPAT, acyltransferase domain DOE60_RS08260 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB DOE60_RS08265 IPR006370 4-hydroxybenzoate polyprenyltransferase-like DOE60_RS08265 IPR030470 UbiA prenyltransferase conserved site DOE60_RS08265 IPR039653 Prenyltransferase DOE60_RS08265 IPR000537 UbiA prenyltransferase family DOE60_RS08270 IPR007440 Chorismate--pyruvate lyase DOE60_RS08270 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE60_RS08275 IPR010794 Maltose operon periplasmic DOE60_RS08280 IPR003192 Porin, LamB-type DOE60_RS08280 IPR023738 Maltoporin DOE60_RS08280 IPR036998 Porin, LamB-type superfamily DOE60_RS08285 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS08285 IPR003593 AAA+ ATPase domain DOE60_RS08285 IPR003439 ABC transporter-like DOE60_RS08285 IPR017871 ABC transporter, conserved site DOE60_RS08285 IPR015855 ABC transporter, maltose/maltodextrin import, MalK DOE60_RS08285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08285 IPR040582 MalK, OB fold domain DOE60_RS08290 IPR006061 Solute-binding family 1, conserved site DOE60_RS08290 IPR006059 Bacterial extracellular solute-binding protein DOE60_RS08290 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein DOE60_RS08295 IPR029345 Maltose transport system permease protein MalF, P2 domain DOE60_RS08295 IPR035277 MalF, N-terminal DOE60_RS08295 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like DOE60_RS08295 IPR035906 MetI-like superfamily DOE60_RS08295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS08300 IPR035906 MetI-like superfamily DOE60_RS08300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS08305 IPR036259 MFS transporter superfamily DOE60_RS08305 IPR020846 Major facilitator superfamily domain DOE60_RS08305 IPR005828 Major facilitator, sugar transporter-like DOE60_RS08305 IPR005829 Sugar transporter, conserved site DOE60_RS08305 IPR003663 Sugar/inositol transporter DOE60_RS08310 IPR020948 Phosphate-starvation-induced PsiE-like DOE60_RS08310 IPR009315 Phosphate-starvation-induced PsiE DOE60_RS08315 IPR010344 Exopolysaccharide biosynthesis protein YbjH DOE60_RS08320 IPR010425 Domain of unknown function DUF1017 DOE60_RS08325 IPR023373 YmcC-like superfamily DOE60_RS08325 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB DOE60_RS08335 IPR035482 Phosphoglucose isomerase, SIS domain 2 DOE60_RS08335 IPR001672 Phosphoglucose isomerase (PGI) DOE60_RS08335 IPR023096 Phosphoglucose isomerase, C-terminal DOE60_RS08335 IPR035476 Phosphoglucose isomerase, SIS domain 1 DOE60_RS08335 IPR018189 Phosphoglucose isomerase, conserved site DOE60_RS08340 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS08340 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain DOE60_RS08340 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS08340 IPR001341 Aspartate kinase DOE60_RS08340 IPR018042 Aspartate kinase, conserved site DOE60_RS08340 IPR005260 Aspartate kinase, monofunctional class DOE60_RS08340 IPR002912 ACT domain DOE60_RS08345 IPR009057 Homeobox-like domain superfamily DOE60_RS08345 IPR014875 Mor transcription activator DOE60_RS08355 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS08355 IPR023346 Lysozyme-like domain superfamily DOE60_RS08355 IPR008258 Transglycosylase SLT domain 1 DOE60_RS08435 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal DOE60_RS08435 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE60_RS08435 IPR037053 Phage tail collar domain superfamily DOE60_RS08435 IPR011083 Phage tail collar domain DOE60_RS08435 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE60_RS08440 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE60_RS08460 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS08460 IPR036412 HAD-like superfamily DOE60_RS08460 IPR000150 Cof family DOE60_RS08465 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08465 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS08465 IPR037171 NagB/RpiA transferase-like DOE60_RS08465 IPR014036 DeoR C-terminal sensor domain DOE60_RS08465 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08465 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS08465 IPR001034 DeoR-type HTH domain DOE60_RS08470 IPR020317 Uncharacterised protein family YjbD DOE60_RS08475 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS08475 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE60_RS08475 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE60_RS08475 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS08475 IPR002942 RNA-binding S4 domain DOE60_RS08475 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE60_RS08475 IPR036986 RNA-binding S4 domain superfamily DOE60_RS08480 IPR018636 Protein of unknown function DUF2058 DOE60_RS08490 IPR029062 Class I glutamine amidotransferase-like DOE60_RS08490 IPR005320 Peptidase S51 DOE60_RS08490 IPR023172 Peptidase S51, dipeptidase E DOE60_RS08495 IPR003841 Sodium-dependent phosphate transport protein DOE60_RS08495 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein DOE60_RS08500 IPR036724 Cobalamin-binding domain superfamily DOE60_RS08500 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DOE60_RS08500 IPR006158 Cobalamin (vitamin B12)-binding domain DOE60_RS08500 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily DOE60_RS08500 IPR003726 Homocysteine-binding domain DOE60_RS08500 IPR011005 Dihydropteroate synthase-like DOE60_RS08500 IPR036589 Homocysteine-binding domain superfamily DOE60_RS08500 IPR033706 Methionine synthase, B12-binding domain DOE60_RS08500 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DOE60_RS08500 IPR011822 Cobalamin-dependent methionine synthase DOE60_RS08500 IPR000489 Pterin-binding domain DOE60_RS08500 IPR036594 Methionine synthase domain DOE60_RS08510 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08510 IPR029016 GAF-like domain superfamily DOE60_RS08510 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08510 IPR014757 Transcription regulator IclR, C-terminal DOE60_RS08510 IPR005471 Transcription regulator IclR, N-terminal DOE60_RS08520 IPR010452 Isocitrate dehydrogenase kinasephosphatase DOE60_RS08525 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS08525 IPR006254 Isocitrate lyase DOE60_RS08525 IPR039556 ICL/PEPM domain DOE60_RS08525 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOE60_RS08525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS08530 IPR011076 Malate synthase-like superfamily DOE60_RS08530 IPR006252 Malate synthase A DOE60_RS08530 IPR019830 Malate synthase, conserved site DOE60_RS08530 IPR001465 Malate synthase DOE60_RS08535 IPR029062 Class I glutamine amidotransferase-like DOE60_RS08535 IPR033752 MetA family DOE60_RS08535 IPR005697 Homoserine O-succinyltransferase MetA DOE60_RS08540 IPR000182 GNAT domain DOE60_RS08540 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS08565 IPR036914 Methylglyoxal synthase-like domain superfamily DOE60_RS08565 IPR024051 AICAR transformylase, duplicated domain superfamily DOE60_RS08565 IPR016193 Cytidine deaminase-like DOE60_RS08565 IPR011607 Methylglyoxal synthase-like domain DOE60_RS08565 IPR002695 Bifunctional purine biosynthesis protein PurH-like DOE60_RS08570 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS08570 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS08570 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOE60_RS08570 IPR000115 Phosphoribosylglycinamide synthetase DOE60_RS08570 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DOE60_RS08570 IPR020559 Phosphoribosylglycinamide synthetase, conserved site DOE60_RS08570 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DOE60_RS08570 IPR011054 Rudiment single hybrid motif DOE60_RS08570 IPR011761 ATP-grasp fold DOE60_RS08570 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DOE60_RS08575 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS08575 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS08575 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS08575 IPR003593 AAA+ ATPase domain DOE60_RS08575 IPR011006 CheY-like superfamily DOE60_RS08575 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS08575 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS08575 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08575 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS08575 IPR009057 Homeobox-like domain superfamily DOE60_RS08580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS08580 IPR029151 Periplasmic sensor-like domain superfamily DOE60_RS08580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS08580 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS08580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS08580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS08580 IPR005467 Histidine kinase domain DOE60_RS08585 IPR025961 Heavy-metal resistance protein DOE60_RS08590 IPR016500 Uncharacterised conserved protein UCP006993 DOE60_RS08590 IPR010858 Protein of unknown function DUF1481 DOE60_RS08595 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE60_RS08595 IPR020816 Histone-like DNA-binding protein, conserved site DOE60_RS08595 IPR000119 Histone-like DNA-binding protein DOE60_RS08600 IPR007338 Protein of unknown function DUF416 DOE60_RS08600 IPR023381 YP001051499.1-like domain superfamily DOE60_RS08605 IPR007581 Endonuclease V DOE60_RS08610 IPR038071 UROD/MetE-like superfamily DOE60_RS08610 IPR006361 Uroporphyrinogen decarboxylase HemE DOE60_RS08610 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DOE60_RS08615 IPR000086 NUDIX hydrolase domain DOE60_RS08615 IPR015376 Zinc ribbon, NADH pyrophosphatase DOE60_RS08615 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS08615 IPR022925 NADH pyrophosphatase NudC DOE60_RS08615 IPR020084 NUDIX hydrolase, conserved site DOE60_RS08620 IPR038309 Rsd/AlgQ superfamily DOE60_RS08620 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd DOE60_RS08620 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DOE60_RS08625 IPR037509 Phosphomethylpyrimidine synthase DOE60_RS08625 IPR025747 ThiC-associated domain DOE60_RS08625 IPR038521 ThiC/Bza superfamily DOE60_RS08625 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B DOE60_RS08630 IPR013785 Aldolase-type TIM barrel DOE60_RS08630 IPR036206 Thiamin phosphate synthase superfamily DOE60_RS08630 IPR022998 Thiamine phosphate synthase/TenI DOE60_RS08630 IPR034291 Thiamine phosphate synthase DOE60_RS08635 IPR035985 Ubiquitin-activating enzyme DOE60_RS08635 IPR000594 THIF-type NAD/FAD binding fold DOE60_RS08635 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF DOE60_RS08640 IPR012675 Beta-grasp domain superfamily DOE60_RS08640 IPR003749 Sulfur carrier ThiS/MoaD-like DOE60_RS08640 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE60_RS08640 IPR010035 ThiS, thiamine-biosynthesis DOE60_RS08645 IPR013785 Aldolase-type TIM barrel DOE60_RS08645 IPR008867 Thiazole synthase DOE60_RS08645 IPR033983 Thiazole synthase ThiG DOE60_RS08650 IPR034428 ThiH/NocL/HydG-like DOE60_RS08650 IPR007197 Radical SAM DOE60_RS08650 IPR010722 Biotin and thiamin synthesis-associated domain DOE60_RS08650 IPR012726 Thiazole biosynthesis ThiH DOE60_RS08650 IPR013785 Aldolase-type TIM barrel DOE60_RS08660 IPR007080 RNA polymerase Rpb1, domain 1 DOE60_RS08660 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DOE60_RS08660 IPR000722 RNA polymerase, alpha subunit DOE60_RS08660 IPR006592 RNA polymerase, N-terminal DOE60_RS08660 IPR038120 RNA polymerase Rpb1, funnel domain superfamily DOE60_RS08660 IPR007081 RNA polymerase Rpb1, domain 5 DOE60_RS08660 IPR007066 RNA polymerase Rpb1, domain 3 DOE60_RS08660 IPR042102 RNA polymerase Rpb1, domain 3 superfamily DOE60_RS08660 IPR007083 RNA polymerase Rpb1, domain 4 DOE60_RS08665 IPR014724 RNA polymerase Rpb2, OB-fold DOE60_RS08665 IPR007641 RNA polymerase Rpb2, domain 7 DOE60_RS08665 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DOE60_RS08665 IPR037034 RNA polymerase Rpb2, domain 2 superfamily DOE60_RS08665 IPR015712 DNA-directed RNA polymerase, subunit 2 DOE60_RS08665 IPR007644 RNA polymerase, beta subunit, protrusion DOE60_RS08665 IPR007121 RNA polymerase, beta subunit, conserved site DOE60_RS08665 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type DOE60_RS08665 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily DOE60_RS08665 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain DOE60_RS08665 IPR007645 RNA polymerase Rpb2, domain 3 DOE60_RS08665 IPR007642 RNA polymerase Rpb2, domain 2 DOE60_RS08670 IPR000206 Ribosomal protein L7/L12 DOE60_RS08670 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE60_RS08670 IPR013823 Ribosomal protein L7/L12, C-terminal DOE60_RS08670 IPR008932 Ribosomal protein L7/L12, oligomerisation DOE60_RS08670 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DOE60_RS08675 IPR022973 Ribosomal protein L10 DOE60_RS08675 IPR002363 Ribosomal protein L10, eubacterial, conserved site DOE60_RS08675 IPR001790 Ribosomal protein L10P DOE60_RS08690 IPR023673 Ribosomal protein L1, conserved site DOE60_RS08690 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DOE60_RS08690 IPR023674 Ribosomal protein L1-like DOE60_RS08690 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DOE60_RS08690 IPR005878 Ribosomal protein L1, bacterial-type DOE60_RS08690 IPR002143 Ribosomal protein L1 DOE60_RS08695 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DOE60_RS08695 IPR020784 Ribosomal protein L11, N-terminal DOE60_RS08695 IPR020785 Ribosomal protein L11, conserved site DOE60_RS08695 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DOE60_RS08695 IPR020783 Ribosomal protein L11, C-terminal DOE60_RS08695 IPR006519 Ribosomal protein L11, bacterial-type DOE60_RS08695 IPR000911 Ribosomal protein L11/L12 DOE60_RS08700 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS08700 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DOE60_RS08700 IPR001062 Transcription antitermination protein, NusG DOE60_RS08700 IPR036735 NusG, N-terminal domain superfamily DOE60_RS08700 IPR014722 Ribosomal protein L2, domain 2 DOE60_RS08700 IPR005824 KOW DOE60_RS08700 IPR006645 NusG, N-terminal DOE60_RS08705 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DOE60_RS08705 IPR038379 SecE superfamily DOE60_RS08705 IPR005807 SecE subunit of protein translocation complex, bacterial-like DOE60_RS08745 IPR004566 Pantothenate kinase DOE60_RS08745 IPR006083 Phosphoribulokinase/uridine kinase DOE60_RS08745 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08750 IPR030855 Bifunctional ligase/repressor BirA DOE60_RS08750 IPR013196 Helix-turn-helix, type 11 DOE60_RS08750 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE60_RS08750 IPR003142 Biotin protein ligase, C-terminal DOE60_RS08750 IPR004409 Biotin operon repressor, helix-turn-helix domain DOE60_RS08750 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DOE60_RS08750 IPR008988 Transcriptional repressor, C-terminal DOE60_RS08750 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08750 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08755 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DOE60_RS08755 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS08755 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS08755 IPR016166 FAD-binding domain, PCMH-type DOE60_RS08755 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE60_RS08755 IPR006094 FAD linked oxidase, N-terminal DOE60_RS08755 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DOE60_RS08755 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DOE60_RS08785 IPR001920 Asp/Glu racemase DOE60_RS08785 IPR018187 Asp/Glu racemase, active site 1 DOE60_RS08785 IPR033134 Asp/Glu racemase, active site 2 DOE60_RS08785 IPR004391 Glutamate racemase DOE60_RS08785 IPR015942 Asp/Glu/hydantoin racemase DOE60_RS08790 IPR010917 TonB-dependent receptor, conserved site DOE60_RS08790 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOE60_RS08790 IPR039426 Vitamin B12 transporter BtuB-like DOE60_RS08790 IPR012910 TonB-dependent receptor, plug domain DOE60_RS08790 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS08790 IPR010916 TonB box, conserved site DOE60_RS08790 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS08790 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS08795 IPR030390 RNA methyltransferase TrmA, active site DOE60_RS08795 IPR030391 RNA methyltransferase TrmA, conserved site DOE60_RS08795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS08795 IPR010280 (Uracil-5)-methyltransferase family DOE60_RS08795 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA DOE60_RS08800 IPR009867 Protein of unknown function DUF1422 DOE60_RS08805 IPR023764 Transcriptional repressor HTH, FabR DOE60_RS08805 IPR009057 Homeobox-like domain superfamily DOE60_RS08805 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS08815 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS08815 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE60_RS08815 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE60_RS08815 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE60_RS08815 IPR023753 FAD/NAD(P)-binding domain DOE60_RS08815 IPR022962 Soluble pyridine nucleotide transhydrogenase DOE60_RS08820 IPR000847 Transcription regulator HTH, LysR DOE60_RS08820 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS08820 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS08820 IPR005119 LysR, substrate-binding DOE60_RS08830 IPR009049 Argininosuccinate lyase DOE60_RS08830 IPR008948 L-Aspartase-like DOE60_RS08830 IPR024083 Fumarase/histidase, N-terminal DOE60_RS08830 IPR020557 Fumarate lyase, conserved site DOE60_RS08830 IPR029419 Argininosuccinate lyase, C-terminal DOE60_RS08830 IPR022761 Fumarate lyase, N-terminal DOE60_RS08830 IPR000362 Fumarate lyase family DOE60_RS08835 IPR037528 Acetylglutamate kinase ArgB DOE60_RS08835 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS08835 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic DOE60_RS08835 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS08835 IPR004662 Acetylglutamate kinase family DOE60_RS08840 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE60_RS08840 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE60_RS08840 IPR036291 NAD(P)-binding domain superfamily DOE60_RS08840 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site DOE60_RS08840 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 DOE60_RS08845 IPR011650 Peptidase M20, dimerisation domain DOE60_RS08845 IPR010169 Acetylornithine deacetylase ArgE DOE60_RS08845 IPR036264 Bacterial exopeptidase dimerisation domain DOE60_RS08845 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE60_RS08845 IPR002933 Peptidase M20 DOE60_RS08850 IPR033129 Phosphoenolpyruvate carboxylase, His active site DOE60_RS08850 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site DOE60_RS08850 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type DOE60_RS08850 IPR021135 Phosphoenolpyruvate carboxylase DOE60_RS08850 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS08855 IPR040423 Phosphoethanolamine transferase DOE60_RS08855 IPR000917 Sulfatase, N-terminal DOE60_RS08855 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS08860 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS08860 IPR009057 Homeobox-like domain superfamily DOE60_RS08860 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS08860 IPR018062 HTH domain AraC-type, conserved site DOE60_RS08865 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE60_RS08865 IPR013785 Aldolase-type TIM barrel DOE60_RS08865 IPR023001 Fructose-6-phosphate aldolase DOE60_RS08865 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase DOE60_RS08865 IPR018225 Transaldolase, active site DOE60_RS08865 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial DOE60_RS08870 IPR016205 Glycerol dehydrogenase DOE60_RS08870 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS08870 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS08875 IPR009706 Protein of unknown function DUF1287 DOE60_RS08880 IPR019793 Peroxidases heam-ligand binding site DOE60_RS08880 IPR019794 Peroxidase, active site DOE60_RS08880 IPR010255 Haem peroxidase superfamily DOE60_RS08880 IPR002016 Haem peroxidase DOE60_RS08880 IPR000763 Catalase-peroxidase haem DOE60_RS08885 IPR004620 5,10-methylenetetrahydrofolate reductase DOE60_RS08885 IPR003171 Methylenetetrahydrofolate reductase DOE60_RS08885 IPR029041 FAD-linked oxidoreductase-like DOE60_RS08890 IPR029052 Metallo-dependent phosphatase-like DOE60_RS08890 IPR008334 5'-Nucleotidase, C-terminal DOE60_RS08890 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE60_RS08890 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS08890 IPR041498 Bacterial Ig domain DOE60_RS08890 IPR006179 5'-Nucleotidase/apyrase DOE60_RS08890 IPR006146 5'-Nucleotidase, conserved site DOE60_RS08905 IPR018042 Aspartate kinase, conserved site DOE60_RS08905 IPR001341 Aspartate kinase DOE60_RS08905 IPR001342 Homoserine dehydrogenase, catalytic DOE60_RS08905 IPR019811 Homoserine dehydrogenase, conserved site DOE60_RS08905 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOE60_RS08905 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOE60_RS08905 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS08905 IPR036291 NAD(P)-binding domain superfamily DOE60_RS08905 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS08905 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOE60_RS08910 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOE60_RS08910 IPR011821 O-succinylhomoserine (thiol)-lyase DOE60_RS08910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS08910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS08910 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS08915 IPR023453 Methionine repressor MetJ domain superfamily DOE60_RS08915 IPR010985 Ribbon-helix-helix DOE60_RS08915 IPR002084 Methionine repressor MetJ DOE60_RS08920 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DOE60_RS08920 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS08945 IPR025479 Domain of unknown function DUF4329 DOE60_RS08945 IPR001826 RHS protein DOE60_RS08945 IPR022385 Rhs repeat-associated core DOE60_RS08945 IPR031325 RHS repeat DOE60_RS08945 IPR006530 YD repeat DOE60_RS08955 IPR002150 Ribosomal protein L31 DOE60_RS08955 IPR027491 Ribosomal protein L31 type A DOE60_RS08955 IPR042105 Ribosomal protein L31 superfamily DOE60_RS08955 IPR034704 L28p-like DOE60_RS08960 IPR005259 Primosomal protein N' DOE60_RS08960 IPR001650 Helicase, C-terminal DOE60_RS08960 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS08960 IPR011545 DEAD/DEAH box helicase domain DOE60_RS08960 IPR041222 Primosomal protein N', 3' DNA-binding domain DOE60_RS08960 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily DOE60_RS08960 IPR041236 Primosomal protein N, C-terminal domain DOE60_RS08960 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain DOE60_RS08960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08965 IPR000843 LacI-type HTH domain DOE60_RS08965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS08965 IPR028082 Periplasmic binding protein-like I DOE60_RS08970 IPR036680 Sporulation-like domain superfamily DOE60_RS08970 IPR007730 Sporulation-like domain DOE60_RS08970 IPR011930 Cell division protein FtsN DOE60_RS08975 IPR022281 ATP-dependent protease, HslV subunit DOE60_RS08975 IPR023333 Proteasome B-type subunit DOE60_RS08975 IPR001353 Proteasome, subunit alpha/beta DOE60_RS08975 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS08980 IPR004491 Heat shock protein HslU DOE60_RS08980 IPR019489 Clp ATPase, C-terminal DOE60_RS08980 IPR003959 ATPase, AAA-type, core DOE60_RS08980 IPR003593 AAA+ ATPase domain DOE60_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS08985 IPR000537 UbiA prenyltransferase family DOE60_RS08985 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase DOE60_RS08985 IPR026046 UbiA prenyltransferase domain containing protein 1 DOE60_RS08990 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria DOE60_RS08990 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DOE60_RS08990 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DOE60_RS08990 IPR010203 Regulator of ribonuclease activity A DOE60_RS08995 IPR009252 Cell division protein ZapB DOE60_RS09000 IPR022357 Major intrinsic protein, conserved site DOE60_RS09000 IPR023271 Aquaporin-like DOE60_RS09000 IPR000425 Major intrinsic protein DOE60_RS09005 IPR000577 Carbohydrate kinase, FGGY DOE60_RS09005 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS09005 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE60_RS09005 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE60_RS09005 IPR005999 Glycerol kinase DOE60_RS09010 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase DOE60_RS09015 IPR033892 Ferredoxin--NADP reductase, bacteria DOE60_RS09015 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS09015 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS09015 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS09015 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE60_RS09015 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS09020 IPR008523 Protein of unknown function DUF805 DOE60_RS09025 IPR009918 Protein of unknown function DUF1454 DOE60_RS09030 IPR020861 Triosephosphate isomerase, active site DOE60_RS09030 IPR035990 Triosephosphate isomerase superfamily DOE60_RS09030 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DOE60_RS09030 IPR000652 Triosephosphate isomerase DOE60_RS09030 IPR013785 Aldolase-type TIM barrel DOE60_RS09035 IPR030676 Citrate carrier CitT-related DOE60_RS09035 IPR001898 Solute carrier family 13 DOE60_RS09045 IPR003763 CDP-diacylglycerol pyrophosphatase DOE60_RS09045 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial DOE60_RS09045 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily DOE60_RS09045 IPR036265 HIT-like superfamily DOE60_RS09050 IPR034408 Sulphate/thiosulphate-binding site DOE60_RS09050 IPR000957 Sulphate/thiosulphate-binding, conserved site DOE60_RS09050 IPR005669 Thiosulphate/Sulfate-binding protein DOE60_RS09055 IPR000023 Phosphofructokinase domain DOE60_RS09055 IPR015912 Phosphofructokinase, conserved site DOE60_RS09055 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic DOE60_RS09055 IPR022953 ATP-dependent 6-phosphofructokinase DOE60_RS09055 IPR035966 Phosphofructokinase superfamily DOE60_RS09055 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type DOE60_RS09060 IPR002524 Cation efflux protein DOE60_RS09060 IPR027470 Cation efflux protein, cytoplasmic domain DOE60_RS09060 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOE60_RS09060 IPR023783 Cation efflux pump FieF DOE60_RS09060 IPR027469 Cation efflux transmembrane domain superfamily DOE60_RS09065 IPR012899 LTXXQ motif family protein DOE60_RS09070 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS09070 IPR011006 CheY-like superfamily DOE60_RS09070 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS09070 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS09070 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09075 IPR003660 HAMP domain DOE60_RS09075 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS09075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS09075 IPR005467 Histidine kinase domain DOE60_RS09075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS09075 IPR032404 Two-component sensor protein CpxA, periplasmic domain DOE60_RS09075 IPR038515 CpxA, periplasmic domain superfamily DOE60_RS09075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS09075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS09080 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE60_RS09080 IPR005163 3-alpha domain DOE60_RS09080 IPR005302 Molybdenum cofactor sulfurase, C-terminal DOE60_RS09085 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOE60_RS09085 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOE60_RS09085 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOE60_RS09085 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOE60_RS09085 IPR001189 Manganese/iron superoxide dismutase DOE60_RS09085 IPR019833 Manganese/iron superoxide dismutase, binding site DOE60_RS09090 IPR004682 TRAP transporter solute receptor, DctP family DOE60_RS09090 IPR018389 TRAP transporter solute receptor DctP/TeaA DOE60_RS09090 IPR038404 TRAP transporter solute receptor DctP superfamily DOE60_RS09095 IPR007387 TRAP transporter, small membrane protein DctQ DOE60_RS09105 IPR009331 Oligogalacturonate-specific porin DOE60_RS09110 IPR004673 L-rhamnose-proton symport, RhaT DOE60_RS09115 IPR023699 Transcription activator HTH, RhaR DOE60_RS09115 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS09115 IPR014710 RmlC-like jelly roll fold DOE60_RS09115 IPR009057 Homeobox-like domain superfamily DOE60_RS09115 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS09115 IPR018062 HTH domain AraC-type, conserved site DOE60_RS09115 IPR011051 RmlC-like cupin domain superfamily DOE60_RS09115 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE60_RS09120 IPR018062 HTH domain AraC-type, conserved site DOE60_RS09120 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS09120 IPR023609 Transcription regulator HTH, RhaS DOE60_RS09120 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE60_RS09120 IPR009057 Homeobox-like domain superfamily DOE60_RS09120 IPR037923 Transcription regulator HTH-like DOE60_RS09120 IPR014710 RmlC-like jelly roll fold DOE60_RS09120 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS09130 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE60_RS09130 IPR013449 Rhamnulokinase DOE60_RS09130 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS09135 IPR036237 Xylose isomerase-like superfamily DOE60_RS09135 IPR009308 Rhamnose isomerase DOE60_RS09140 IPR013447 Rhamnulose-1-phosphate aldolase DOE60_RS09140 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS09140 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS09145 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS09145 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS09145 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS09150 IPR008000 Rhamnose/fucose mutarotase DOE60_RS09150 IPR013448 L-rhamnose mutarotase DOE60_RS09150 IPR011008 Dimeric alpha-beta barrel DOE60_RS09160 IPR011606 Branched-chain amino acid transport, permease DOE60_RS09160 IPR004471 Branched-chain amino acid transport, AzlC DOE60_RS09175 IPR024291 Protein of unknown function DUF3829 DOE60_RS09180 IPR003786 Sulfur carrier protein FdhD DOE60_RS09180 IPR016193 Cytidine deaminase-like DOE60_RS09190 IPR025949 PapC-like, C-terminal domain DOE60_RS09190 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS09190 IPR025885 PapC, N-terminal domain DOE60_RS09190 IPR037224 PapC, N-terminal domain superfamily DOE60_RS09190 IPR000015 Outer membrane usher protein DOE60_RS09190 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS09195 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS09195 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS09195 IPR013783 Immunoglobulin-like fold DOE60_RS09195 IPR008962 PapD-like superfamily DOE60_RS09205 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS09205 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS09205 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS09205 IPR006443 Formate dehydrogenase-N, alpha subunit DOE60_RS09205 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS09205 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS09205 IPR006656 Molybdopterin oxidoreductase DOE60_RS09205 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS09210 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS09210 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS09210 IPR006443 Formate dehydrogenase-N, alpha subunit DOE60_RS09210 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS09210 IPR006656 Molybdopterin oxidoreductase DOE60_RS09210 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS09210 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS09210 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS09215 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria DOE60_RS09215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS09215 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DOE60_RS09215 IPR014603 Formate dehydrogenase iron-sulphur subunit DOE60_RS09215 IPR015246 Formate dehydrogenase, transmembrane DOE60_RS09215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS09220 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS09220 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS09220 IPR006471 Formate dehydrogenase, gamma subunit DOE60_RS09225 IPR006452 Formate dehydrogenase accessory protein DOE60_RS09225 IPR024064 FdhE-like superfamily DOE60_RS09235 IPR009387 Toxin HigB-2 DOE60_RS09240 IPR029058 Alpha/Beta hydrolase fold DOE60_RS09240 IPR013094 Alpha/beta hydrolase fold-3 DOE60_RS09245 IPR029069 HotDog domain superfamily DOE60_RS09245 IPR012660 Thioesterase, putative DOE60_RS09245 IPR000182 GNAT domain DOE60_RS09245 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS09250 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DOE60_RS09250 IPR003732 D-aminoacyl-tRNA deacylase DTD DOE60_RS09255 IPR023679 Uncharacterised protein family UPF0761, bacterial DOE60_RS09255 IPR017039 Virulence factor BrkB DOE60_RS09260 IPR036412 HAD-like superfamily DOE60_RS09260 IPR023214 HAD superfamily DOE60_RS09260 IPR006439 HAD hydrolase, subfamily IA DOE60_RS09260 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS09260 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS09265 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS09265 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS09265 IPR001034 DeoR-type HTH domain DOE60_RS09265 IPR014036 DeoR C-terminal sensor domain DOE60_RS09265 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09265 IPR037171 NagB/RpiA transferase-like DOE60_RS09265 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS09270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS09270 IPR011611 Carbohydrate kinase PfkB DOE60_RS09270 IPR002139 Ribokinase/fructokinase DOE60_RS09270 IPR029056 Ribokinase-like DOE60_RS09270 IPR030877 Sulfofructose kinase DOE60_RS09275 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE60_RS09275 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS09275 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS09275 IPR036291 NAD(P)-binding domain superfamily DOE60_RS09275 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE60_RS09275 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE60_RS09275 IPR030876 3-sulfolactaldehyde reductase DOE60_RS09275 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE60_RS09280 IPR017291 Sulfofructosephosphate aldolase, YihT DOE60_RS09280 IPR013785 Aldolase-type TIM barrel DOE60_RS09280 IPR002915 DeoC/FbaB/ lacD aldolase DOE60_RS09285 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS09285 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS09285 IPR034116 AGE domain DOE60_RS09285 IPR030875 Sulfoquinovose isomerase DOE60_RS09290 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS09290 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE60_RS09290 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS09290 IPR037480 YihR-like DOE60_RS09295 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS09295 IPR000322 Glycoside hydrolase family 31 DOE60_RS09295 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS09295 IPR017853 Glycoside hydrolase superfamily DOE60_RS09300 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS09300 IPR001927 Sodium:galactoside symporter DOE60_RS09300 IPR036259 MFS transporter superfamily DOE60_RS09300 IPR039672 Lactose permease-like DOE60_RS09305 IPR001927 Sodium:galactoside symporter DOE60_RS09305 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS09305 IPR036259 MFS transporter superfamily DOE60_RS09305 IPR039672 Lactose permease-like DOE60_RS09310 IPR009331 Oligogalacturonate-specific porin DOE60_RS09330 IPR004559 Heme chaperone HemW-like DOE60_RS09330 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOE60_RS09330 IPR006638 Elp3/MiaB/NifB DOE60_RS09330 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS09330 IPR007197 Radical SAM DOE60_RS09340 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS09340 IPR036412 HAD-like superfamily DOE60_RS09340 IPR023214 HAD superfamily DOE60_RS09340 IPR000150 Cof family DOE60_RS09345 IPR006298 GTP-binding protein TypA DOE60_RS09345 IPR035647 EF-G domain III/V-like DOE60_RS09345 IPR000640 Elongation factor EFG, domain V-like DOE60_RS09345 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS09345 IPR031157 Tr-type G domain, conserved site DOE60_RS09345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09345 IPR005225 Small GTP-binding protein domain DOE60_RS09345 IPR000795 Transcription factor, GTP-binding domain DOE60_RS09345 IPR035651 BipA, domain V DOE60_RS09345 IPR042116 GTP-binding protein TypA/BipA, C-terminal DOE60_RS09345 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS09355 IPR027302 Glutamine synthetase, N-terminal conserved site DOE60_RS09355 IPR008146 Glutamine synthetase, catalytic domain DOE60_RS09355 IPR027303 Glutamine synthetase, glycine-rich site DOE60_RS09355 IPR036651 Glutamine synthetase, N-terminal domain superfamily DOE60_RS09355 IPR001637 Glutamine synthetase class-I, adenylation site DOE60_RS09355 IPR008147 Glutamine synthetase, beta-Grasp domain DOE60_RS09355 IPR004809 Glutamine synthetase type I DOE60_RS09355 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE60_RS09360 IPR000014 PAS domain DOE60_RS09360 IPR035965 PAS domain superfamily DOE60_RS09360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS09360 IPR013767 PAS fold DOE60_RS09360 IPR005467 Histidine kinase domain DOE60_RS09360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS09360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS09360 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS09360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS09365 IPR010114 DNA-binding transcriptional regulator NtrC DOE60_RS09365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS09365 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS09365 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS09365 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS09365 IPR009057 Homeobox-like domain superfamily DOE60_RS09365 IPR003593 AAA+ ATPase domain DOE60_RS09365 IPR011006 CheY-like superfamily DOE60_RS09365 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS09365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09365 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS09375 IPR007197 Radical SAM DOE60_RS09375 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN DOE60_RS09375 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS09375 IPR010723 HemN, C-terminal DOE60_RS09375 IPR006638 Elp3/MiaB/NifB DOE60_RS09375 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOE60_RS09380 IPR007336 Der GTPase activator DOE60_RS09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09390 IPR006073 GTP binding domain DOE60_RS09390 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DOE60_RS09390 IPR030393 EngB-type guanine nucleotide-binding (G) domain DOE60_RS09395 IPR001098 DNA-directed DNA polymerase, family A, palm domain DOE60_RS09395 IPR002562 3'-5' exonuclease domain DOE60_RS09395 IPR012337 Ribonuclease H-like superfamily DOE60_RS09395 IPR029060 PIN-like domain superfamily DOE60_RS09395 IPR002421 5'-3' exonuclease, N-terminal DOE60_RS09395 IPR036397 Ribonuclease H superfamily DOE60_RS09395 IPR008918 Helix-hairpin-helix motif, class 2 DOE60_RS09395 IPR002298 DNA polymerase A DOE60_RS09395 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOE60_RS09395 IPR019760 DNA-directed DNA polymerase, family A, conserved site DOE60_RS09395 IPR018320 DNA polymerase 1 DOE60_RS09395 IPR020045 DNA polymerase I-like, H3TH domain DOE60_RS09395 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE60_RS09405 IPR002123 Phospholipid/glycerol acyltransferase DOE60_RS09410 IPR017937 Thioredoxin, conserved site DOE60_RS09410 IPR013766 Thioredoxin domain DOE60_RS09410 IPR001853 DSBA-like thioredoxin domain DOE60_RS09410 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DOE60_RS09410 IPR036249 Thioredoxin-like superfamily DOE60_RS09415 IPR032882 SrkA/RdoA protein kinase DOE60_RS09415 IPR011009 Protein kinase-like domain superfamily DOE60_RS09415 IPR002575 Aminoglycoside phosphotransferase DOE60_RS09420 IPR038134 YihD-like superfamily DOE60_RS09420 IPR009383 Protein of unknown function DUF1040 DOE60_RS09425 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS09425 IPR025877 MobA-like NTP transferase DOE60_RS09425 IPR013482 Molybdenum cofactor guanylyltransferase DOE60_RS09430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09430 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain DOE60_RS09460 IPR026816 Flavodoxin domain DOE60_RS09460 IPR001226 Flavodoxin, conserved site DOE60_RS09460 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS09460 IPR029039 Flavoprotein-like superfamily DOE60_RS09465 IPR004772 TrkH potassium transport family DOE60_RS09465 IPR003445 Cation transporter DOE60_RS09470 IPR001498 Impact, N-terminal DOE60_RS09470 IPR035647 EF-G domain III/V-like DOE60_RS09470 IPR023582 Impact family DOE60_RS09470 IPR015796 Impact family, bacterial/archaeal DOE60_RS09470 IPR036956 Impact, N-terminal domain superfamily DOE60_RS09470 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS09470 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DOE60_RS09470 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DOE60_RS09475 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE60_RS09475 IPR000994 Peptidase M24 DOE60_RS09475 IPR036005 Creatinase/aminopeptidase-like DOE60_RS09475 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE60_RS09475 IPR022846 Xaa-Pro dipeptidase DOE60_RS09480 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS09480 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE60_RS09480 IPR001753 Enoyl-CoA hydratase/isomerase DOE60_RS09480 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS09480 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOE60_RS09480 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOE60_RS09480 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DOE60_RS09480 IPR036291 NAD(P)-binding domain superfamily DOE60_RS09480 IPR012799 Fatty oxidation complex, alpha subunit FadB DOE60_RS09485 IPR020610 Thiolase, active site DOE60_RS09485 IPR016039 Thiolase-like DOE60_RS09485 IPR002155 Thiolase DOE60_RS09485 IPR012805 Acetyl-CoA C-acyltransferase FadA DOE60_RS09485 IPR020617 Thiolase, C-terminal DOE60_RS09485 IPR020613 Thiolase, conserved site DOE60_RS09485 IPR020616 Thiolase, N-terminal DOE60_RS09485 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE60_RS09490 IPR010262 Arylsulfotransferase, bacteria DOE60_RS09490 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria DOE60_RS09490 IPR038477 Arylsulfotransferase, N-terminal domain superfamily DOE60_RS09490 IPR035391 Arylsulfotransferase, Ig-like domain DOE60_RS09495 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE60_RS09495 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS09495 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS09495 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS09495 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS09500 IPR023677 UbiD decarboxylyase, bacteria DOE60_RS09500 IPR002830 UbiD decarboxylyase family DOE60_RS09505 IPR010215 Transcription antitermination protein RfaH DOE60_RS09505 IPR036735 NusG, N-terminal domain superfamily DOE60_RS09505 IPR006645 NusG, N-terminal DOE60_RS09510 IPR001130 TatD family DOE60_RS09510 IPR032466 Metal-dependent hydrolase DOE60_RS09510 IPR024918 3'-5' ssDNA/RNA exonuclease TatD DOE60_RS09510 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE60_RS09515 IPR019820 Sec-independent periplasmic protein translocase, conserved site DOE60_RS09515 IPR002033 Sec-independent periplasmic protein translocase TatC DOE60_RS09520 IPR018448 Twin-arginine translocation protein TatB DOE60_RS09525 IPR003369 Sec-independent protein translocase protein TatA/B/E DOE60_RS09525 IPR006312 Sec-independent protein translocase protein TatA/E DOE60_RS09530 IPR010232 Probable protein kinase UbiB DOE60_RS09530 IPR011009 Protein kinase-like domain superfamily DOE60_RS09530 IPR004147 UbiB domain DOE60_RS09535 IPR036527 SCP2 sterol-binding domain superfamily DOE60_RS09535 IPR038989 Ubiquinone biosynthesis protein UbiJ DOE60_RS09535 IPR003033 SCP2 sterol-binding domain DOE60_RS09540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS09540 IPR004033 UbiE/COQ5 methyltransferase DOE60_RS09540 IPR023576 UbiE/COQ5 methyltransferase, conserved site DOE60_RS09545 IPR003798 DNA recombination RmuC DOE60_RS09550 IPR010058 Uridine phosphorylase DOE60_RS09550 IPR035994 Nucleoside phosphorylase superfamily DOE60_RS09550 IPR000845 Nucleoside phosphorylase domain DOE60_RS09550 IPR018016 Nucleoside phosphorylase, conserved site DOE60_RS09555 IPR029058 Alpha/Beta hydrolase fold DOE60_RS09555 IPR002925 Dienelactone hydrolase DOE60_RS09560 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE60_RS09560 IPR013785 Aldolase-type TIM barrel DOE60_RS09560 IPR023885 4Fe4S-binding SPASM domain DOE60_RS09560 IPR007197 Radical SAM DOE60_RS09565 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DOE60_RS09565 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DOE60_RS09565 IPR006276 Cobalamin-independent methionine synthase DOE60_RS09565 IPR038071 UROD/MetE-like superfamily DOE60_RS09575 IPR005119 LysR, substrate-binding DOE60_RS09575 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain DOE60_RS09575 IPR000847 Transcription regulator HTH, LysR DOE60_RS09575 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09575 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS09580 IPR004779 Carboxylate/Amino Acid/Amine Transporter DOE60_RS09580 IPR000620 EamA domain DOE60_RS09585 IPR000150 Cof family DOE60_RS09585 IPR036412 HAD-like superfamily DOE60_RS09585 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS09585 IPR023214 HAD superfamily DOE60_RS09590 IPR022742 Serine aminopeptidase, S33 DOE60_RS09590 IPR029058 Alpha/Beta hydrolase fold DOE60_RS09595 IPR001123 Amino acid exporter protein, LeuE-type DOE60_RS09595 IPR004778 Homoserine/Threonine efflux protein DOE60_RS09600 IPR004778 Homoserine/Threonine efflux protein DOE60_RS09600 IPR001123 Amino acid exporter protein, LeuE-type DOE60_RS09605 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09605 IPR018982 RQC domain DOE60_RS09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09605 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DOE60_RS09605 IPR010997 HRDC-like superfamily DOE60_RS09605 IPR002121 HRDC domain DOE60_RS09605 IPR011545 DEAD/DEAH box helicase domain DOE60_RS09605 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS09605 IPR004589 DNA helicase, ATP-dependent, RecQ type DOE60_RS09605 IPR001650 Helicase, C-terminal DOE60_RS09605 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DOE60_RS09610 IPR036541 Phospholipase A1 superfamily DOE60_RS09610 IPR003187 Phospholipase A1 DOE60_RS09615 IPR003736 Phenylacetic acid degradation-related domain DOE60_RS09615 IPR006683 Thioesterase domain DOE60_RS09615 IPR029069 HotDog domain superfamily DOE60_RS09620 IPR000620 EamA domain DOE60_RS09620 IPR004626 RarD protein DOE60_RS09630 IPR024399 Protein of unknown function DUF2628 DOE60_RS09635 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DOE60_RS09635 IPR004488 Magnesium/cobalt transport protein CorA DOE60_RS09645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09645 IPR000212 DNA helicase, UvrD/REP type DOE60_RS09645 IPR014017 UvrD-like DNA helicase, C-terminal DOE60_RS09645 IPR034739 UvrD/AddA helicase, N-terminal DOE60_RS09645 IPR005753 DNA helicase, ATP-dependent, UvrD type DOE60_RS09645 IPR014016 UvrD-like helicase, ATP-binding domain DOE60_RS09645 IPR013986 DExx box DNA helicase domain superfamily DOE60_RS09650 IPR036412 HAD-like superfamily DOE60_RS09650 IPR006439 HAD hydrolase, subfamily IA DOE60_RS09650 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS09650 IPR023214 HAD superfamily DOE60_RS09655 IPR002104 Integrase, catalytic domain DOE60_RS09655 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS09655 IPR011931 Tyrosine recombinase XerC DOE60_RS09655 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS09655 IPR023009 Tyrosine recombinase XerC/XerD DOE60_RS09655 IPR010998 Integrase/recombinase, N-terminal DOE60_RS09655 IPR004107 Integrase, SAM-like, N-terminal DOE60_RS09660 IPR007435 Protein of unknown function DUF484 DOE60_RS09660 IPR029016 GAF-like domain superfamily DOE60_RS09665 IPR018510 Diaminopimelate epimerase, active site DOE60_RS09665 IPR001653 Diaminopimelate epimerase, DapF DOE60_RS09670 IPR032831 Prokaryotic lipoprotein-attachment site DOE60_RS09680 IPR020895 Frataxin conserved site DOE60_RS09680 IPR036524 Frataxin/CyaY superfamily DOE60_RS09680 IPR002908 Frataxin/CyaY DOE60_RS09685 IPR024686 Adenylate cyclase class-I, conserved site DOE60_RS09685 IPR024685 Adenylate cyclase class-I, N-terminal domain DOE60_RS09685 IPR000274 Adenylate cyclase, class-I DOE60_RS09695 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DOE60_RS09695 IPR022418 Porphobilinogen deaminase, C-terminal DOE60_RS09695 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DOE60_RS09695 IPR022417 Porphobilinogen deaminase, N-terminal DOE60_RS09695 IPR000860 Porphobilinogen deaminase DOE60_RS09700 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily DOE60_RS09700 IPR039793 Uroporphyrinogen-III synthase DOE60_RS09700 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase DOE60_RS09705 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DOE60_RS09710 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS09710 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS09710 IPR013105 Tetratricopeptide repeat 2 DOE60_RS09710 IPR019734 Tetratricopeptide repeat DOE60_RS09710 IPR005254 Heme biosynthesis-associated TPR protein DOE60_RS09710 IPR010817 HemY, N-terminal DOE60_RS09735 IPR004840 Amino acid permease, conserved site DOE60_RS09735 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS09740 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase DOE60_RS09740 IPR004629 Glycosyl transferase WecB/TagA/CpsF DOE60_RS09745 IPR010691 Probable ECA polymerase WzyE DOE60_RS09750 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase DOE60_RS09755 IPR032896 Lipid III flippase WzxE DOE60_RS09755 IPR002797 Polysaccharide biosynthesis protein DOE60_RS09760 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE DOE60_RS09760 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS09760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS09760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS09760 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like DOE60_RS09760 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE60_RS09765 IPR000182 GNAT domain DOE60_RS09765 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS09765 IPR020683 Ankyrin repeat-containing domain DOE60_RS09765 IPR012752 dTDP-fucosamine acetyltransferase WecD DOE60_RS09765 IPR002110 Ankyrin repeat DOE60_RS09770 IPR005835 Nucleotidyl transferase domain DOE60_RS09770 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS09770 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOE60_RS09775 IPR036291 NAD(P)-binding domain superfamily DOE60_RS09775 IPR005888 dTDP-glucose 4,6-dehydratase DOE60_RS09775 IPR016040 NAD(P)-binding domain DOE60_RS09780 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOE60_RS09780 IPR036291 NAD(P)-binding domain superfamily DOE60_RS09780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS09780 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC DOE60_RS09780 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase DOE60_RS09780 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOE60_RS09780 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOE60_RS09780 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOE60_RS09780 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOE60_RS09785 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB DOE60_RS09785 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain DOE60_RS09785 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like DOE60_RS09790 IPR032895 ECA polysaccharide chain length modulation protein WzzE DOE60_RS09790 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE60_RS09795 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase DOE60_RS09795 IPR000715 Glycosyl transferase, family 4 DOE60_RS09805 IPR041703 Transcription termination factor Rho, ATP binding domain DOE60_RS09805 IPR003593 AAA+ ATPase domain DOE60_RS09805 IPR011113 Rho termination factor, RNA-binding domain DOE60_RS09805 IPR036269 Rho termination factor, N-terminal domain superfamily DOE60_RS09805 IPR011112 Rho termination factor, N-terminal DOE60_RS09805 IPR004665 Transcription termination factor Rho DOE60_RS09805 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS09805 IPR011129 Cold shock domain DOE60_RS09805 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09815 IPR013766 Thioredoxin domain DOE60_RS09815 IPR017937 Thioredoxin, conserved site DOE60_RS09815 IPR005746 Thioredoxin DOE60_RS09815 IPR036249 Thioredoxin-like superfamily DOE60_RS09820 IPR001650 Helicase, C-terminal DOE60_RS09820 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09820 IPR023554 ATP-dependent RNA helicase RhlB type DOE60_RS09820 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE60_RS09820 IPR011545 DEAD/DEAH box helicase domain DOE60_RS09820 IPR014014 RNA helicase, DEAD-box type, Q motif DOE60_RS09830 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase DOE60_RS09830 IPR003695 Ppx/GppA phosphatase DOE60_RS09830 IPR030673 Pyrophosphatase, GppA/Ppx-type DOE60_RS09835 IPR013986 DExx box DNA helicase domain superfamily DOE60_RS09835 IPR000212 DNA helicase, UvrD/REP type DOE60_RS09835 IPR005752 ATP-dependent DNA helicase Rep DOE60_RS09835 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09835 IPR034739 UvrD/AddA helicase, N-terminal DOE60_RS09835 IPR014017 UvrD-like DNA helicase, C-terminal DOE60_RS09835 IPR014016 UvrD-like helicase, ATP-binding domain DOE60_RS09840 IPR006419 Nicotinamide mononucleotide transporter PnuC DOE60_RS09855 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE60_RS09855 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE60_RS09860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS09860 IPR013023 Ketol-acid reductoisomerase DOE60_RS09860 IPR000506 Ketol-acid reductoisomerase, C-terminal DOE60_RS09860 IPR013116 Ketol-acid reductoisomerase, N-terminal DOE60_RS09860 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS09860 IPR036291 NAD(P)-binding domain superfamily DOE60_RS09865 IPR005119 LysR, substrate-binding DOE60_RS09865 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS09865 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09865 IPR000847 Transcription regulator HTH, LysR DOE60_RS09865 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain DOE60_RS09875 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS09875 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE60_RS09875 IPR001721 Threonine dehydratase, ACT-like domain DOE60_RS09875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS09875 IPR005787 Threonine dehydratase, biosynthetic DOE60_RS09875 IPR038110 Threonine dehydratase, ACT-like domain superfamily DOE60_RS09880 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DOE60_RS09880 IPR037237 IlvD/EDD, N-terminal domain DOE60_RS09880 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DOE60_RS09880 IPR004404 Dihydroxy-acid dehydratase DOE60_RS09880 IPR042096 Dihydroxy-acid dehydratase, C-terminal DOE60_RS09885 IPR036038 Aminotransferase-like, PLP-dependent enzymes DOE60_RS09885 IPR018300 Aminotransferase, class IV, conserved site DOE60_RS09885 IPR001544 Aminotransferase class IV DOE60_RS09885 IPR005785 Branched-chain amino acid aminotransferase I DOE60_RS09885 IPR033939 Branched-chain aminotransferase DOE60_RS09890 IPR002912 ACT domain DOE60_RS09895 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE60_RS09895 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS09895 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS09895 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS09895 IPR029061 Thiamin diphosphate-binding fold DOE60_RS09895 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE60_RS09895 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE60_RS09895 IPR000399 TPP-binding enzyme, conserved site DOE60_RS09900 IPR012567 IlvGEDA operon leader peptide DOE60_RS09905 IPR004482 Mg chelatase-related protein DOE60_RS09905 IPR025158 Mg chelatase-related protein, C-terminal domain DOE60_RS09905 IPR000523 Magnesium chelatase ChlI domain DOE60_RS09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09905 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS09905 IPR003593 AAA+ ATPase domain DOE60_RS09905 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS09910 IPR007335 Protein of unknown function DUF413 DOE60_RS09915 IPR005119 LysR, substrate-binding DOE60_RS09915 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09915 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS09915 IPR020890 Transcription regulator HTH, HdfR DOE60_RS09915 IPR000847 Transcription regulator HTH, LysR DOE60_RS09950 IPR011711 GntR, C-terminal DOE60_RS09950 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS09950 IPR000524 Transcription regulator HTH, GntR DOE60_RS09950 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS09950 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS09955 IPR036259 MFS transporter superfamily DOE60_RS09955 IPR011701 Major facilitator superfamily DOE60_RS09955 IPR020846 Major facilitator superfamily domain DOE60_RS09955 IPR004638 Drug resistance transporter EmrB-like DOE60_RS09960 IPR028082 Periplasmic binding protein-like I DOE60_RS09960 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS09960 IPR000843 LacI-type HTH domain DOE60_RS09965 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS09965 IPR011611 Carbohydrate kinase PfkB DOE60_RS09965 IPR011877 Ribokinase DOE60_RS09965 IPR029056 Ribokinase-like DOE60_RS09965 IPR002139 Ribokinase/fructokinase DOE60_RS09970 IPR028082 Periplasmic binding protein-like I DOE60_RS09970 IPR025997 Periplasmic binding protein DOE60_RS09975 IPR001851 ABC transporter, permease DOE60_RS09980 IPR015861 ABC transporter, ribose import, RbsA DOE60_RS09980 IPR003439 ABC transporter-like DOE60_RS09980 IPR003593 AAA+ ATPase domain DOE60_RS09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS09980 IPR017871 ABC transporter, conserved site DOE60_RS09985 IPR023750 RbsD-like superfamily DOE60_RS09985 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU DOE60_RS09985 IPR023064 D-ribose pyranase DOE60_RS09990 IPR003855 Potassium transporter DOE60_RS09990 IPR023051 Potassium uptake protein, low affinity, Kup DOE60_RS10000 IPR022547 ATPase, RavA, C-terminal DOE60_RS10000 IPR011704 ATPase, dynein-related, AAA domain DOE60_RS10000 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10000 IPR003593 AAA+ ATPase domain DOE60_RS10000 IPR041538 ATPase RavA-like, AAA lid domain DOE60_RS10000 IPR023671 ATPase RavA DOE60_RS10010 IPR004618 Aspartate--ammonia ligase DOE60_RS10010 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS10015 IPR011008 Dimeric alpha-beta barrel DOE60_RS10015 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10015 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10015 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE60_RS10015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE60_RS10015 IPR019888 Transcription regulator AsnC-type DOE60_RS10015 IPR000485 AsnC-type HTH domain DOE60_RS10015 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS10020 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS10020 IPR029039 Flavoprotein-like superfamily DOE60_RS10030 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DOE60_RS10030 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DOE60_RS10030 IPR026904 GidA associated domain 3 DOE60_RS10030 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS10030 IPR020595 MnmG-related, conserved site DOE60_RS10035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS10035 IPR003682 rRNA small subunit methyltransferase G DOE60_RS10040 IPR005598 ATP synthase protein I DOE60_RS10045 IPR035908 ATP synthase, F0 complex, subunit A superfamily DOE60_RS10045 IPR023011 ATP synthase, F0 complex, subunit A, active site DOE60_RS10045 IPR000568 ATP synthase, F0 complex, subunit A DOE60_RS10050 IPR002379 V-ATPase proteolipid subunit C-like domain DOE60_RS10050 IPR035921 F/V-ATP synthase subunit C superfamily DOE60_RS10050 IPR038662 F1F0 ATP synthase subunit C superfamily DOE60_RS10050 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DOE60_RS10050 IPR000454 ATP synthase, F0 complex, subunit C DOE60_RS10050 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DOE60_RS10055 IPR005864 ATP synthase, F0 complex, subunit b, bacterial DOE60_RS10055 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast DOE60_RS10055 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DOE60_RS10060 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily DOE60_RS10060 IPR000711 ATPase, OSCP/delta subunit DOE60_RS10060 IPR020781 ATPase, OSCP/delta subunit, conserved site DOE60_RS10065 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DOE60_RS10065 IPR005294 ATP synthase, F1 complex, alpha subunit DOE60_RS10065 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DOE60_RS10065 IPR000793 ATP synthase, alpha subunit, C-terminal DOE60_RS10065 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOE60_RS10065 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10065 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE60_RS10065 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOE60_RS10065 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS10065 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE60_RS10070 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DOE60_RS10070 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DOE60_RS10070 IPR000131 ATP synthase, F1 complex, gamma subunit DOE60_RS10075 IPR003593 AAA+ ATPase domain DOE60_RS10075 IPR005722 ATP synthase, F1 complex, beta subunit DOE60_RS10075 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOE60_RS10075 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE60_RS10075 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE60_RS10075 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS10075 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DOE60_RS10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10080 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DOE60_RS10080 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DOE60_RS10080 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DOE60_RS10080 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DOE60_RS10080 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DOE60_RS10095 IPR038009 GlmU, C-terminal LbH domain DOE60_RS10095 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DOE60_RS10095 IPR011004 Trimeric LpxA-like superfamily DOE60_RS10095 IPR001451 Hexapeptide repeat DOE60_RS10095 IPR025877 MobA-like NTP transferase DOE60_RS10095 IPR018357 Hexapeptide transferase, conserved site DOE60_RS10095 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS10100 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOE60_RS10100 IPR035490 GlmS/FrlB, SIS domain 2 DOE60_RS10100 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS10100 IPR035466 GlmS/AgaS, SIS domain 1 DOE60_RS10100 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS10100 IPR001347 Sugar isomerase (SIS) DOE60_RS10105 IPR024370 PBP domain DOE60_RS10105 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS DOE60_RS10110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS10110 IPR035906 MetI-like superfamily DOE60_RS10110 IPR011864 Phosphate ABC transporter, permease protein PstC DOE60_RS10115 IPR005672 Phosphate transport system permease protein PstA DOE60_RS10115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS10115 IPR035906 MetI-like superfamily DOE60_RS10120 IPR003439 ABC transporter-like DOE60_RS10120 IPR017871 ABC transporter, conserved site DOE60_RS10120 IPR015850 ABC transporter, phosphate import, PstB DOE60_RS10120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10120 IPR005670 Phosphate transport system permease protein 1 DOE60_RS10120 IPR003593 AAA+ ATPase domain DOE60_RS10125 IPR026022 PhoU domain DOE60_RS10125 IPR028366 Phosphate transport system protein PhoU DOE60_RS10125 IPR038078 PhoU-like domain superfamily DOE60_RS10130 IPR006439 HAD hydrolase, subfamily IA DOE60_RS10130 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS10130 IPR023214 HAD superfamily DOE60_RS10130 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS10130 IPR036412 HAD-like superfamily DOE60_RS10135 IPR026033 Azaguanine-like transporters DOE60_RS10135 IPR006043 Xanthine/uracil/vitamin C permease DOE60_RS10140 IPR005025 NADPH-dependent FMN reductase-like DOE60_RS10140 IPR029039 Flavoprotein-like superfamily DOE60_RS10145 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE60_RS10150 IPR005119 LysR, substrate-binding DOE60_RS10150 IPR000847 Transcription regulator HTH, LysR DOE60_RS10150 IPR023746 Transcription regulator HTH, YidZ DOE60_RS10150 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10150 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10150 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain DOE60_RS10155 IPR036259 MFS transporter superfamily DOE60_RS10155 IPR020846 Major facilitator superfamily domain DOE60_RS10155 IPR011701 Major facilitator superfamily DOE60_RS10155 IPR023697 Multidrug resistance protein MdtL DOE60_RS10160 IPR031168 TrmE-type guanine nucleotide-binding domain DOE60_RS10160 IPR018948 GTP-binding protein TrmE, N-terminal DOE60_RS10160 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOE60_RS10160 IPR006073 GTP binding domain DOE60_RS10160 IPR004520 tRNA modification GTPase MnmE DOE60_RS10160 IPR025867 MnmE, helical domain DOE60_RS10160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10160 IPR005225 Small GTP-binding protein domain DOE60_RS10160 IPR027368 tRNA modification GTPase MnmE domain 2 DOE60_RS10165 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DOE60_RS10165 IPR028053 Membrane insertase YidC, N-terminal DOE60_RS10165 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 DOE60_RS10165 IPR038210 Membrane insertase YidC, periplasmic domain DOE60_RS10165 IPR019998 Membrane insertase YidC DOE60_RS10165 IPR038221 YidC, periplasmic domain superfamily DOE60_RS10170 IPR002696 Putative membrane protein insertion efficiency factor DOE60_RS10175 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS10175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS10175 IPR000100 Ribonuclease P DOE60_RS10175 IPR020539 Ribonuclease P, conserved site DOE60_RS10180 IPR000271 Ribosomal protein L34 DOE60_RS10180 IPR020939 Ribosomal protein L34, conserved site DOE60_RS10185 IPR013317 Chromosomal replication initiator protein DnaA DOE60_RS10185 IPR010921 Trp repressor/replication initiator DOE60_RS10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10185 IPR038454 DnaA, N-terminal domain superfamily DOE60_RS10185 IPR024633 DnaA N-terminal domain DOE60_RS10185 IPR013159 Chromosomal replication initiator, DnaA C-terminal DOE60_RS10185 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DOE60_RS10185 IPR020591 Chromosomal replication control, initiator DnaA-like DOE60_RS10185 IPR001957 Chromosomal replication control, initiator DnaA DOE60_RS10185 IPR003593 AAA+ ATPase domain DOE60_RS10190 IPR001001 DNA polymerase III, beta sliding clamp DOE60_RS10190 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DOE60_RS10190 IPR022637 DNA polymerase III, beta sliding clamp, central DOE60_RS10190 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DOE60_RS10195 IPR003395 RecF/RecN/SMC, N-terminal DOE60_RS10195 IPR042174 DNA-binding RecF, domain 2 DOE60_RS10195 IPR001238 DNA-binding, RecF DOE60_RS10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10195 IPR018078 DNA-binding, RecF, conserved site DOE60_RS10200 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS10200 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS10200 IPR041423 DNA gyrase subunit B insert domain DOE60_RS10200 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS10200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS10200 IPR034160 DNA gyrase subunit B, TOPRIM domain DOE60_RS10200 IPR006171 TOPRIM domain DOE60_RS10200 IPR018522 DNA topoisomerase, type IIA, conserved site DOE60_RS10200 IPR002288 DNA gyrase B subunit, C-terminal DOE60_RS10200 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOE60_RS10200 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOE60_RS10200 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE60_RS10200 IPR001241 DNA topoisomerase, type IIA DOE60_RS10200 IPR011557 DNA gyrase, subunit B DOE60_RS10205 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS10205 IPR023214 HAD superfamily DOE60_RS10205 IPR000150 Cof family DOE60_RS10205 IPR036412 HAD-like superfamily DOE60_RS10210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS10210 IPR003660 HAMP domain DOE60_RS10210 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE60_RS10210 IPR037952 Sensor histidine kinase TorS, sensor domain DOE60_RS10210 IPR011006 CheY-like superfamily DOE60_RS10210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS10210 IPR036641 HPT domain superfamily DOE60_RS10210 IPR005467 Histidine kinase domain DOE60_RS10210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS10210 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS10210 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS10210 IPR038188 TorS, sensor domain superfamily DOE60_RS10210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS10215 IPR028082 Periplasmic binding protein-like I DOE60_RS10215 IPR014301 TMAO reductase system, periplasmic protein TorT DOE60_RS10215 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE60_RS10220 IPR011006 CheY-like superfamily DOE60_RS10220 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS10220 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10220 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS10220 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS10225 IPR005126 NapC/NirT cytochrome c, N-terminal DOE60_RS10225 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK DOE60_RS10225 IPR011031 Multihaem cytochrome DOE60_RS10225 IPR036280 Multiheme cytochrome superfamily DOE60_RS10225 IPR038266 NapC/NirT cytochrome c superfamily DOE60_RS10230 IPR011887 Trimethylamine-N-oxide reductase TorA DOE60_RS10230 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS10230 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase DOE60_RS10230 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS10230 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS10230 IPR041460 Molybdopterin oxidoreductase, N-terminal DOE60_RS10230 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain DOE60_RS10230 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS10230 IPR006656 Molybdopterin oxidoreductase DOE60_RS10235 IPR023069 Chaperone TorD DOE60_RS10235 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS10235 IPR036386 HscB, C-terminal domain superfamily DOE60_RS10235 IPR036411 TorD-like superfamily DOE60_RS10240 IPR025992 Haem-binding domain DOE60_RS10240 IPR004852 Di-haem cytochrome c peroxidase DOE60_RS10240 IPR009056 Cytochrome c-like domain DOE60_RS10240 IPR036909 Cytochrome c-like domain superfamily DOE60_RS10245 IPR003439 ABC transporter-like DOE60_RS10245 IPR017871 ABC transporter, conserved site DOE60_RS10245 IPR005895 ABC transporter, haem export, CcmA DOE60_RS10245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10245 IPR003593 AAA+ ATPase domain DOE60_RS10250 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DOE60_RS10250 IPR003544 Cytochrome c-type biogenesis protein CcmB DOE60_RS10255 IPR003557 Cytochrome c-type biogenesis protein CcmC DOE60_RS10255 IPR002541 Cytochrome c assembly protein DOE60_RS10260 IPR007078 Haem exporter protein D (CcmD) DOE60_RS10280 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE DOE60_RS10280 IPR013740 Redoxin DOE60_RS10280 IPR017937 Thioredoxin, conserved site DOE60_RS10280 IPR013766 Thioredoxin domain DOE60_RS10280 IPR036249 Thioredoxin-like superfamily DOE60_RS10285 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS10285 IPR019734 Tetratricopeptide repeat DOE60_RS10285 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS10285 IPR005616 CcmH/CycL/Ccl2/NrfF family DOE60_RS10285 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOE60_RS10290 IPR002938 FAD-binding domain DOE60_RS10290 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS10295 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS10295 IPR022223 Protein of unknown function DUF3748 DOE60_RS10295 IPR011659 WD40-like Beta Propeller DOE60_RS10300 IPR010780 Protein of unknown function DUF1375 DOE60_RS10310 IPR002068 Alpha crystallin/Hsp20 domain DOE60_RS10310 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE60_RS10310 IPR023728 Small heat shock protein IbpA DOE60_RS10310 IPR008978 HSP20-like chaperone DOE60_RS10315 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE60_RS10315 IPR022848 Small heat shock protein IbpB DOE60_RS10315 IPR008978 HSP20-like chaperone DOE60_RS10315 IPR002068 Alpha crystallin/Hsp20 domain DOE60_RS10320 IPR023018 Transport protein YidE, putative DOE60_RS10320 IPR006512 YidE/YbjL duplication DOE60_RS10320 IPR006037 Regulator of K+ conductance, C-terminal DOE60_RS10320 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE60_RS10325 IPR003807 Domain of unknown function DUF202 DOE60_RS10330 IPR003807 Domain of unknown function DUF202 DOE60_RS10335 IPR013785 Aldolase-type TIM barrel DOE60_RS10340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE60_RS10340 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS10340 IPR011780 D-serine ammonia-lyase DOE60_RS10340 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS10345 IPR003474 Gluconate transporter DOE60_RS10350 IPR005119 LysR, substrate-binding DOE60_RS10350 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10350 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10350 IPR000847 Transcription regulator HTH, LysR DOE60_RS10350 IPR011781 D-serine deaminase transcriptional activator DOE60_RS10360 IPR020846 Major facilitator superfamily domain DOE60_RS10360 IPR036259 MFS transporter superfamily DOE60_RS10360 IPR011701 Major facilitator superfamily DOE60_RS10360 IPR004734 Multidrug resistance protein DOE60_RS10365 IPR021027 Transposase, putative, helix-turn-helix domain DOE60_RS10365 IPR001959 Probable transposase, IS891/IS1136/IS1341 DOE60_RS10365 IPR010095 Transposase IS605, OrfB, C-terminal DOE60_RS10375 IPR025211 Toxin TisB, type I toxin-antitoxin system DOE60_RS10390 IPR012566 IlvB leader peptide DOE60_RS10395 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS10395 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS10395 IPR000399 TPP-binding enzyme, conserved site DOE60_RS10395 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE60_RS10395 IPR029061 Thiamin diphosphate-binding fold DOE60_RS10395 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE60_RS10395 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS10395 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE60_RS10400 IPR002912 ACT domain DOE60_RS10400 IPR004789 Acetolactate synthase, small subunit DOE60_RS10400 IPR039557 AHAS, ACT domain DOE60_RS10405 IPR001034 DeoR-type HTH domain DOE60_RS10405 IPR014036 DeoR C-terminal sensor domain DOE60_RS10405 IPR037171 NagB/RpiA transferase-like DOE60_RS10405 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS10410 IPR002139 Ribokinase/fructokinase DOE60_RS10410 IPR011877 Ribokinase DOE60_RS10410 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS10410 IPR029056 Ribokinase-like DOE60_RS10410 IPR011611 Carbohydrate kinase PfkB DOE60_RS10425 IPR011006 CheY-like superfamily DOE60_RS10425 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS10425 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS10425 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS10430 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS10430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS10430 IPR005467 Histidine kinase domain DOE60_RS10430 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE60_RS10430 IPR007895 MASE1 DOE60_RS10435 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE60_RS10435 IPR000849 Sugar phosphate transporter DOE60_RS10435 IPR036259 MFS transporter superfamily DOE60_RS10435 IPR011701 Major facilitator superfamily DOE60_RS10435 IPR020846 Major facilitator superfamily domain DOE60_RS10440 IPR020846 Major facilitator superfamily domain DOE60_RS10440 IPR000849 Sugar phosphate transporter DOE60_RS10440 IPR011701 Major facilitator superfamily DOE60_RS10440 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE60_RS10440 IPR036259 MFS transporter superfamily DOE60_RS10465 IPR009587 Protein of unknown function DUF1198 DOE60_RS10480 IPR036259 MFS transporter superfamily DOE60_RS10480 IPR023680 Purine ribonucleoside efflux pump, NepI DOE60_RS10480 IPR020846 Major facilitator superfamily domain DOE60_RS10480 IPR011701 Major facilitator superfamily DOE60_RS10485 IPR001360 Glycoside hydrolase family 1 DOE60_RS10485 IPR017853 Glycoside hydrolase superfamily DOE60_RS10485 IPR018120 Glycoside hydrolase family 1, active site DOE60_RS10495 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS10495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10495 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS10495 IPR011608 PRD domain DOE60_RS10495 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS10495 IPR036634 PRD domain superfamily DOE60_RS10495 IPR003593 AAA+ ATPase domain DOE60_RS10505 IPR013789 Phosphotransferase system, mannose family IIA component DOE60_RS10505 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS10505 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE60_RS10505 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS10505 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup DOE60_RS10505 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE60_RS10505 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE60_RS10510 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit DOE60_RS10515 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE60_RS10520 IPR018319 L-seryl-tRNA selenium transferase-like DOE60_RS10520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS10520 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS10520 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like DOE60_RS10525 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase DOE60_RS10525 IPR013785 Aldolase-type TIM barrel DOE60_RS10530 IPR006842 Transposase (putative), YhgA-like DOE60_RS10530 IPR010106 Recombination-promoting nuclease RpnA DOE60_RS10535 IPR000620 EamA domain DOE60_RS10540 IPR003416 MgtC/SapB/SrpB/YhiD family DOE60_RS10545 IPR036412 HAD-like superfamily DOE60_RS10545 IPR006068 Cation-transporting P-type ATPase, C-terminal DOE60_RS10545 IPR004014 Cation-transporting P-type ATPase, N-terminal DOE60_RS10545 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS10545 IPR018303 P-type ATPase, phosphorylation site DOE60_RS10545 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS10545 IPR008250 P-type ATPase, A domain superfamily DOE60_RS10545 IPR023214 HAD superfamily DOE60_RS10545 IPR001757 P-type ATPase DOE60_RS10545 IPR006415 P-type ATPase, subfamily IIIB DOE60_RS10560 IPR000868 Isochorismatase-like DOE60_RS10560 IPR036380 Isochorismatase-like superfamily DOE60_RS10570 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS10570 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS10570 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10580 IPR011050 Pectin lyase fold/virulence factor DOE60_RS10580 IPR005546 Autotransporter beta-domain DOE60_RS10580 IPR012332 P22 tailspike-like, C-terminal domain superfamily DOE60_RS10580 IPR006315 Outer membrane autotransporter barrel DOE60_RS10580 IPR036709 Autotransporter beta-domain superfamily DOE60_RS10585 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS10585 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS10625 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS10625 IPR039672 Lactose permease-like DOE60_RS10625 IPR036259 MFS transporter superfamily DOE60_RS10625 IPR001927 Sodium:galactoside symporter DOE60_RS10630 IPR017853 Glycoside hydrolase superfamily DOE60_RS10630 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS10630 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS10630 IPR025887 Glycoside hydrolase family 31, N-terminal domain DOE60_RS10630 IPR000322 Glycoside hydrolase family 31 DOE60_RS10635 IPR007844 AsmA DOE60_RS10640 IPR006042 Xanthine/uracil permease DOE60_RS10640 IPR006043 Xanthine/uracil/vitamin C permease DOE60_RS10645 IPR004445 Sodium/glutamate symport carrier protein GltS DOE60_RS10650 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS10650 IPR033454 RecG, wedge domain DOE60_RS10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10650 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS10650 IPR001650 Helicase, C-terminal DOE60_RS10650 IPR011545 DEAD/DEAH box helicase domain DOE60_RS10650 IPR004609 ATP-dependent DNA helicase RecG DOE60_RS10655 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal DOE60_RS10655 IPR029028 Alpha/beta knot methyltransferases DOE60_RS10655 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS10655 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS10655 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase DOE60_RS10660 IPR012675 Beta-grasp domain superfamily DOE60_RS10660 IPR012676 TGS-like DOE60_RS10660 IPR007685 RelA/SpoT DOE60_RS10660 IPR002912 ACT domain DOE60_RS10660 IPR004811 RelA/SpoT family DOE60_RS10660 IPR033655 RelA, TGS domain DOE60_RS10660 IPR003607 HD/PDEase domain DOE60_RS10660 IPR004095 TGS DOE60_RS10665 IPR003716 DNA-directed RNA polymerase, omega subunit DOE60_RS10665 IPR006110 RNA polymerase, subunit omega/K/RPB6 DOE60_RS10665 IPR012293 RNA polymerase subunit, RPB6/omega DOE60_RS10665 IPR036161 RPB6/omega subunit-like superfamily DOE60_RS10670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10670 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE60_RS10670 IPR008144 Guanylate kinase-like domain DOE60_RS10670 IPR017665 Guanylate kinase DOE60_RS10670 IPR020590 Guanylate kinase, conserved site DOE60_RS10675 IPR013840 NAD-dependent DNA ligase, N-terminal DOE60_RS10675 IPR020923 DNA ligase B DOE60_RS10675 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS10675 IPR004150 NAD-dependent DNA ligase, OB-fold DOE60_RS10675 IPR010994 RuvA domain 2-like DOE60_RS10675 IPR018239 NAD-dependent DNA ligase, active site DOE60_RS10675 IPR013839 NAD-dependent DNA ligase, adenylation DOE60_RS10675 IPR033136 NAD-dependent DNA ligase, conserved site DOE60_RS10680 IPR005115 Uncharacterised domain UPF0126 DOE60_RS10690 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10690 IPR000847 Transcription regulator HTH, LysR DOE60_RS10690 IPR005119 LysR, substrate-binding DOE60_RS10695 IPR005229 Conserved hypothetical protein CHP00255 DOE60_RS10695 IPR013551 Domain of unknown function DUF1732 DOE60_RS10695 IPR013527 YicC-like, N-terminal DOE60_RS10705 IPR018336 Ribonuclease PH, conserved site DOE60_RS10705 IPR036345 Exoribonuclease, PH domain 2 superfamily DOE60_RS10705 IPR002381 Ribonuclease PH, bacterial-type DOE60_RS10705 IPR027408 PNPase/RNase PH domain superfamily DOE60_RS10705 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOE60_RS10705 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOE60_RS10705 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS10710 IPR004467 Orotate phosphoribosyl transferase domain DOE60_RS10710 IPR000836 Phosphoribosyltransferase domain DOE60_RS10710 IPR029057 Phosphoribosyltransferase-like DOE60_RS10710 IPR023031 Orotate phosphoribosyltransferase DOE60_RS10715 IPR009057 Homeobox-like domain superfamily DOE60_RS10715 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS10715 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS10715 IPR023769 Nucleoid occlusion factor SlmA DOE60_RS10715 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS10720 IPR036157 dUTPase-like superfamily DOE60_RS10720 IPR033704 dUTPase, trimeric DOE60_RS10720 IPR029054 dUTPase-like DOE60_RS10720 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DOE60_RS10725 IPR036551 Flavin prenyltransferase-like DOE60_RS10725 IPR003382 Flavoprotein DOE60_RS10725 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DOE60_RS10725 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DOE60_RS10725 IPR035929 CoaB-like superfamily DOE60_RS10730 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily DOE60_RS10730 IPR020891 Uncharacterised protein family UPF0758, conserved site DOE60_RS10730 IPR001405 Uncharacterised protein family UPF0758 DOE60_RS10730 IPR010994 RuvA domain 2-like DOE60_RS10730 IPR025657 RadC-like JAB domain DOE60_RS10730 IPR037518 MPN domain DOE60_RS10735 IPR001383 Ribosomal protein L28 DOE60_RS10735 IPR037147 Ribosomal protein L28/L24 superfamily DOE60_RS10735 IPR026569 Ribosomal protein L28/L24 DOE60_RS10735 IPR034704 L28p-like DOE60_RS10740 IPR018264 Ribosomal protein L33, conserved site DOE60_RS10740 IPR001705 Ribosomal protein L33 DOE60_RS10740 IPR038584 Ribosomal protein L33 superfamily DOE60_RS10740 IPR011332 Zinc-binding ribosomal protein DOE60_RS10745 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DOE60_RS10745 IPR035937 MutM-like, N-terminal DOE60_RS10745 IPR010979 Ribosomal protein S13-like, H2TH DOE60_RS10745 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DOE60_RS10745 IPR010663 Zinc finger, FPG/IleRS-type DOE60_RS10745 IPR020629 Formamidopyrimidine-DNA glycosylase DOE60_RS10745 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DOE60_RS10745 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DOE60_RS10750 IPR004821 Cytidyltransferase-like domain DOE60_RS10750 IPR001980 Phosphopantetheine adenylyltransferase DOE60_RS10750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS10755 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DOE60_RS10755 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily DOE60_RS10755 IPR039901 3-deoxy-D-manno-octulosonic acid transferase DOE60_RS10760 IPR002201 Glycosyl transferase, family 9 DOE60_RS10760 IPR011916 Lipopolysaccharide heptosyltransferase III, putative DOE60_RS10765 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS10765 IPR001296 Glycosyl transferase, family 1 DOE60_RS10770 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP DOE60_RS10770 IPR011009 Protein kinase-like domain superfamily DOE60_RS10780 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS10780 IPR001296 Glycosyl transferase, family 1 DOE60_RS10785 IPR013645 Glycosyl transferase, family 8, C-terminal DOE60_RS10785 IPR002495 Glycosyl transferase, family 8 DOE60_RS10785 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS10790 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS10790 IPR002495 Glycosyl transferase, family 8 DOE60_RS10790 IPR013645 Glycosyl transferase, family 8, C-terminal DOE60_RS10795 IPR011009 Protein kinase-like domain superfamily DOE60_RS10795 IPR009330 Lipopolysaccharide core heptose(II) kinase DOE60_RS10800 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ DOE60_RS10805 IPR001296 Glycosyl transferase, family 1 DOE60_RS10810 IPR007016 O-antigen ligase-related DOE60_RS10815 IPR011908 Lipopolysaccharide heptosyltransferase I DOE60_RS10815 IPR002201 Glycosyl transferase, family 9 DOE60_RS10820 IPR011910 ADP-heptose--LPS heptosyltransferase 2 DOE60_RS10820 IPR002201 Glycosyl transferase, family 9 DOE60_RS10825 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DOE60_RS10825 IPR036291 NAD(P)-binding domain superfamily DOE60_RS10825 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS10830 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase DOE60_RS10830 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE60_RS10830 IPR004839 Aminotransferase, class I/classII DOE60_RS10830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS10830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS10830 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS10835 IPR004627 L-threonine 3-dehydrogenase DOE60_RS10835 IPR011032 GroES-like superfamily DOE60_RS10835 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS10835 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS10835 IPR036291 NAD(P)-binding domain superfamily DOE60_RS10835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS10835 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS10845 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS10845 IPR006837 Divergent polysaccharide deacetylase DOE60_RS10850 IPR016047 Peptidase M23 DOE60_RS10850 IPR011055 Duplicated hybrid motif DOE60_RS10855 IPR011258 BPG-independent PGAM, N-terminal DOE60_RS10855 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS10855 IPR006124 Metalloenzyme DOE60_RS10855 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily DOE60_RS10855 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent DOE60_RS10860 IPR036873 Rhodanese-like domain superfamily DOE60_RS10860 IPR001763 Rhodanese-like domain DOE60_RS10865 IPR011767 Glutaredoxin active site DOE60_RS10865 IPR002109 Glutaredoxin DOE60_RS10865 IPR014025 Glutaredoxin subgroup DOE60_RS10865 IPR036249 Thioredoxin-like superfamily DOE60_RS10865 IPR011900 Glutaredoxin, GrxC DOE60_RS10870 IPR035958 SecB-like superfamily DOE60_RS10870 IPR003708 Bacterial protein export chaperone SecB DOE60_RS10875 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DOE60_RS10875 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DOE60_RS10875 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS10875 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DOE60_RS10875 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS10875 IPR036291 NAD(P)-binding domain superfamily DOE60_RS10880 IPR010493 Serine acetyltransferase, N-terminal DOE60_RS10880 IPR018357 Hexapeptide transferase, conserved site DOE60_RS10880 IPR001451 Hexapeptide repeat DOE60_RS10880 IPR011004 Trimeric LpxA-like superfamily DOE60_RS10880 IPR005881 Serine O-acetyltransferase DOE60_RS10880 IPR042122 Serine acetyltransferase, N-terminal domain superfamily DOE60_RS10885 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DOE60_RS10885 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS10885 IPR029028 Alpha/beta knot methyltransferases DOE60_RS10885 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS10890 IPR000262 FMN-dependent dehydrogenase DOE60_RS10890 IPR037396 FMN hydroxy acid dehydrogenase domain DOE60_RS10890 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DOE60_RS10890 IPR013785 Aldolase-type TIM barrel DOE60_RS10890 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site DOE60_RS10890 IPR020920 L-lactate dehydrogenase, bacterial DOE60_RS10895 IPR000524 Transcription regulator HTH, GntR DOE60_RS10895 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10895 IPR011711 GntR, C-terminal DOE60_RS10895 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10895 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS10900 IPR003804 L-lactate permease DOE60_RS10905 IPR021230 Protein of unknown function DUF2810 DOE60_RS10915 IPR038026 MtlR-like superfamily DOE60_RS10915 IPR007761 Mannitol repressor MtlR-like DOE60_RS10920 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS10920 IPR013131 Mannitol dehydrogenase, N-terminal DOE60_RS10920 IPR023027 Mannitol dehydrogenase, conserved site DOE60_RS10920 IPR013118 Mannitol dehydrogenase, C-terminal DOE60_RS10920 IPR000669 Mannitol dehydrogenase DOE60_RS10920 IPR023028 Mannitol-1-phosphate 5-dehydrogenase DOE60_RS10920 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS10920 IPR036291 NAD(P)-binding domain superfamily DOE60_RS10925 IPR036095 PTS system IIB component-like superfamily DOE60_RS10925 IPR003352 Phosphotransferase system, EIIC DOE60_RS10925 IPR002178 PTS EIIA type-2 domain DOE60_RS10925 IPR016152 Phosphotransferase/anion transporter DOE60_RS10925 IPR029503 Phosphotransferase system EIIB component, mannitol-specific DOE60_RS10925 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS10925 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS10925 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS10925 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC DOE60_RS10930 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS10930 IPR036249 Thioredoxin-like superfamily DOE60_RS10930 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS10930 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS10930 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS10930 IPR034343 Uncharacterized GST-like protein YibF DOE60_RS10935 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain DOE60_RS10935 IPR004534 L-seryl-tRNA(Sec) selenium transferase DOE60_RS10935 IPR018319 L-seryl-tRNA selenium transferase-like DOE60_RS10935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS10935 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS10940 IPR004535 Translation elongation factor, selenocysteine-specific DOE60_RS10940 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS10940 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS10940 IPR015190 Translation elongation factor SelB, winged helix, type 2 DOE60_RS10940 IPR015191 Translation elongation factor SelB, winged helix, type 3 DOE60_RS10940 IPR031157 Tr-type G domain, conserved site DOE60_RS10940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS10940 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS10940 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE60_RS10940 IPR000795 Transcription factor, GTP-binding domain DOE60_RS10940 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS10945 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS10945 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS10945 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS10950 IPR000600 ROK family DOE60_RS10955 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS10955 IPR015590 Aldehyde dehydrogenase domain DOE60_RS10955 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS10955 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS10955 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS10955 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS10960 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS10960 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS10960 IPR004661 L-ribulose-5-phosphate 4-epimerase DOE60_RS10965 IPR001719 AP endonuclease 2 DOE60_RS10965 IPR004560 L-ribulose-5-phosphate 3-epimerase DOE60_RS10965 IPR036237 Xylose isomerase-like superfamily DOE60_RS10965 IPR013022 Xylose isomerase-like, TIM barrel domain DOE60_RS10970 IPR011060 Ribulose-phosphate binding barrel DOE60_RS10970 IPR013785 Aldolase-type TIM barrel DOE60_RS10970 IPR041710 HPS/KGPDC domain DOE60_RS10970 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE60_RS10975 IPR000577 Carbohydrate kinase, FGGY DOE60_RS10975 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS10975 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE60_RS10975 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE60_RS10980 IPR011701 Major facilitator superfamily DOE60_RS10980 IPR020846 Major facilitator superfamily domain DOE60_RS10980 IPR036259 MFS transporter superfamily DOE60_RS10980 IPR000849 Sugar phosphate transporter DOE60_RS10985 IPR032344 Protein of unknown function DUF4862 DOE60_RS10985 IPR036237 Xylose isomerase-like superfamily DOE60_RS10990 IPR037012 YhcH/YjgK/YiaL superfamily DOE60_RS10990 IPR004375 YhcH/YjgK/YiaL family DOE60_RS10995 IPR023689 2,3-diketo-L-gulonate reductase DOE60_RS10995 IPR003767 Malate/L-lactate dehydrogenase-like DOE60_RS10995 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily DOE60_RS11000 IPR029016 GAF-like domain superfamily DOE60_RS11000 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11000 IPR014757 Transcription regulator IclR, C-terminal DOE60_RS11000 IPR005471 Transcription regulator IclR, N-terminal DOE60_RS11000 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS11005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS11010 IPR004839 Aminotransferase, class I/classII DOE60_RS11010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS11010 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS11015 IPR014635 Alpha-amylase, MalS type DOE60_RS11015 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS11015 IPR017853 Glycoside hydrolase superfamily DOE60_RS11020 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DOE60_RS11025 IPR018062 HTH domain AraC-type, conserved site DOE60_RS11025 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS11025 IPR009057 Homeobox-like domain superfamily DOE60_RS11025 IPR028082 Periplasmic binding protein-like I DOE60_RS11025 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS11035 IPR036237 Xylose isomerase-like superfamily DOE60_RS11035 IPR013452 Xylose isomerase, bacterial-type DOE60_RS11035 IPR001998 Xylose isomerase DOE60_RS11040 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE60_RS11040 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE60_RS11040 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS11040 IPR000577 Carbohydrate kinase, FGGY DOE60_RS11040 IPR006000 Xylulokinase DOE60_RS11045 IPR038972 Inner membrane protein YiaA-like DOE60_RS11045 IPR008024 YiaAB two helix DOE60_RS11050 IPR008024 YiaAB two helix DOE60_RS11050 IPR038972 Inner membrane protein YiaA-like DOE60_RS11055 IPR002656 Acyltransferase 3 DOE60_RS11055 IPR032905 O-acetyltransferase WecH DOE60_RS11065 IPR025728 YsaB-like lipoprotein DOE60_RS11070 IPR006194 Glycine-tRNA synthetase, heterodimeric DOE60_RS11070 IPR002310 Glycine-tRNA ligase, alpha subunit DOE60_RS11075 IPR008909 DALR anticodon binding DOE60_RS11075 IPR015944 Glycine-tRNA ligase, beta subunit DOE60_RS11075 IPR006194 Glycine-tRNA synthetase, heterodimeric DOE60_RS11080 IPR000021 Hok/gef cell toxic protein DOE60_RS11080 IPR018084 Hok/gef cell toxic protein, conserved site DOE60_RS11090 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS11090 IPR002059 Cold-shock protein, DNA-binding DOE60_RS11090 IPR019844 Cold-shock (CSD) domain DOE60_RS11090 IPR012156 Cold shock, CspA DOE60_RS11090 IPR011129 Cold shock domain DOE60_RS11095 IPR001387 Cro/C1-type helix-turn-helix domain DOE60_RS11095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS11100 IPR021413 Protein of unknown function DUF3053 DOE60_RS11110 IPR036737 OmpA-like domain superfamily DOE60_RS11110 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE60_RS11110 IPR006664 Outer membrane protein, bacterial DOE60_RS11110 IPR039567 Glycine zipper domain DOE60_RS11110 IPR006665 OmpA-like domain DOE60_RS11115 IPR006656 Molybdopterin oxidoreductase DOE60_RS11115 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS11115 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS11115 IPR041460 Molybdopterin oxidoreductase, N-terminal DOE60_RS11115 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain DOE60_RS11115 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase DOE60_RS11115 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS11120 IPR000182 GNAT domain DOE60_RS11120 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS11125 IPR004597 DNA-3-methyladenine glycosylase I DOE60_RS11125 IPR011257 DNA glycosylase DOE60_RS11125 IPR005019 Methyladenine glycosylase DOE60_RS11130 IPR006315 Outer membrane autotransporter barrel DOE60_RS11130 IPR036709 Autotransporter beta-domain superfamily DOE60_RS11130 IPR016955 Autotransporter, YhjY, predicted DOE60_RS11130 IPR005546 Autotransporter beta-domain DOE60_RS11135 IPR040423 Phosphoethanolamine transferase DOE60_RS11135 IPR012549 Phosphoethanolamine transferase, N-terminal DOE60_RS11135 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS11135 IPR000917 Sulfatase, N-terminal DOE60_RS11160 IPR039424 Solute-binding protein family 5 DOE60_RS11160 IPR023765 Solute-binding protein family 5, conserved site DOE60_RS11160 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS11160 IPR000914 Solute-binding protein family 5 domain DOE60_RS11165 IPR035906 MetI-like superfamily DOE60_RS11165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS11170 IPR035906 MetI-like superfamily DOE60_RS11170 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS11170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS11175 IPR017871 ABC transporter, conserved site DOE60_RS11175 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11175 IPR003593 AAA+ ATPase domain DOE60_RS11175 IPR003439 ABC transporter-like DOE60_RS11180 IPR003593 AAA+ ATPase domain DOE60_RS11180 IPR017871 ABC transporter, conserved site DOE60_RS11180 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11180 IPR003439 ABC transporter-like DOE60_RS11185 IPR018227 Amino acid/polyamine transporter 2 DOE60_RS11200 IPR025253 Type I toxin-antitoxin system, toxin Ldr DOE60_RS11205 IPR017744 Cellulose biosynthesis protein BcsG DOE60_RS11210 IPR019995 Cellulose biosynthesis, BcsF/YhjT DOE60_RS11215 IPR017745 Cellulose biosynthesis protein BcsE DOE60_RS11220 IPR024487 Protein YhjR DOE60_RS11225 IPR017746 Cellulose synthase operon protein BcsQ DOE60_RS11225 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11230 IPR005150 Cellulose synthase DOE60_RS11230 IPR009875 PilZ domain DOE60_RS11230 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS11230 IPR001173 Glycosyltransferase 2-like DOE60_RS11230 IPR003919 Cellulose synthase, subunit A DOE60_RS11235 IPR003920 Cellulose synthase, subunit B DOE60_RS11235 IPR018513 Cellulose synthase BcsB, bacterial DOE60_RS11235 IPR008979 Galactose-binding-like domain superfamily DOE60_RS11240 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS11240 IPR019834 Glycoside hydrolase, family 8, conserved site DOE60_RS11240 IPR002037 Glycoside hydrolase, family 8 DOE60_RS11240 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS11245 IPR019734 Tetratricopeptide repeat DOE60_RS11245 IPR008410 Cellulose synthase operon C, C-terminal DOE60_RS11245 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS11245 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS11255 IPR000160 GGDEF domain DOE60_RS11255 IPR003660 HAMP domain DOE60_RS11255 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 DOE60_RS11255 IPR029787 Nucleotide cyclase DOE60_RS11255 IPR001633 EAL domain DOE60_RS11255 IPR035919 EAL domain superfamily DOE60_RS11260 IPR001991 Sodium:dicarboxylate symporter DOE60_RS11260 IPR023954 C4-dicarboxylate transport protein DOE60_RS11260 IPR018107 Sodium:dicarboxylate symporter, conserved site DOE60_RS11260 IPR036458 Sodium:dicarboxylate symporter superfamily DOE60_RS11265 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE60_RS11265 IPR011765 Peptidase M16, N-terminal DOE60_RS11265 IPR007863 Peptidase M16, C-terminal DOE60_RS11270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS11270 IPR011611 Carbohydrate kinase PfkB DOE60_RS11270 IPR029056 Ribokinase-like DOE60_RS11275 IPR035919 EAL domain superfamily DOE60_RS11275 IPR001633 EAL domain DOE60_RS11280 IPR007844 AsmA DOE60_RS11285 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS11285 IPR011701 Major facilitator superfamily DOE60_RS11285 IPR005829 Sugar transporter, conserved site DOE60_RS11285 IPR036259 MFS transporter superfamily DOE60_RS11285 IPR005828 Major facilitator, sugar transporter-like DOE60_RS11285 IPR020846 Major facilitator superfamily domain DOE60_RS11295 IPR005274 Inner membrane protein YhjD DOE60_RS11295 IPR017039 Virulence factor BrkB DOE60_RS11300 IPR005119 LysR, substrate-binding DOE60_RS11300 IPR000847 Transcription regulator HTH, LysR DOE60_RS11300 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11300 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11305 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS11305 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS11320 IPR018232 Glycoside hydrolase, family 37, conserved site DOE60_RS11320 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS11320 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS11320 IPR001661 Glycoside hydrolase, family 37 DOE60_RS11320 IPR023715 Trehalase, cytoplasmic DOE60_RS11325 IPR000524 Transcription regulator HTH, GntR DOE60_RS11325 IPR011663 UbiC transcription regulator-associated DOE60_RS11325 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11325 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11325 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE60_RS11330 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 DOE60_RS11330 IPR035490 GlmS/FrlB, SIS domain 2 DOE60_RS11330 IPR001347 Sugar isomerase (SIS) DOE60_RS11330 IPR024713 Fructosamine deglycase FrlB DOE60_RS11335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS11335 IPR011611 Carbohydrate kinase PfkB DOE60_RS11335 IPR029056 Ribokinase-like DOE60_RS11340 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE60_RS11345 IPR036152 Asparaginase/glutaminase-like superfamily DOE60_RS11345 IPR006034 Asparaginase/glutaminase-like DOE60_RS11345 IPR020827 Asparaginase/glutaminase, active site 1 DOE60_RS11345 IPR004550 L-asparaginase, type II DOE60_RS11345 IPR027475 Asparaginase/glutaminase, active site 2 DOE60_RS11345 IPR040919 Asparaginase/glutaminase, C-terminal DOE60_RS11345 IPR027473 L-asparaginase, C-terminal DOE60_RS11345 IPR027474 L-asparaginase, N-terminal DOE60_RS11345 IPR037152 L-asparaginase, N-terminal domain superfamily DOE60_RS11350 IPR023753 FAD/NAD(P)-binding domain DOE60_RS11350 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE60_RS11350 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE60_RS11350 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS11350 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE60_RS11350 IPR006322 Glutathione reductase, eukaryote/bacterial DOE60_RS11350 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE60_RS11355 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS11355 IPR007473 Ribosomal RNA large subunit methyltransferase J DOE60_RS11355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS11360 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE60_RS11360 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE60_RS11360 IPR033879 Undecaprenyl-diphosphatase DOE60_RS11365 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOE60_RS11365 IPR001567 Peptidase M3A/M3B catalytic domain DOE60_RS11370 IPR007536 Ribosomal RNA small subunit methyltransferase J DOE60_RS11370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS11375 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS11375 IPR023753 FAD/NAD(P)-binding domain DOE60_RS11380 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11380 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11380 IPR030489 Transcription regulator Rrf2-type, conserved site DOE60_RS11380 IPR000944 Transcription regulator Rrf2-type DOE60_RS11380 IPR010242 Transcription factor HTH, IscR DOE60_RS11385 IPR036259 MFS transporter superfamily DOE60_RS11385 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B DOE60_RS11385 IPR000109 Proton-dependent oligopeptide transporter family DOE60_RS11385 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE60_RS11385 IPR005279 Dipeptide/tripeptide permease DOE60_RS11390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS11390 IPR006015 Universal stress protein A family DOE60_RS11390 IPR006016 UspA DOE60_RS11395 IPR019598 Universal stress protein B DOE60_RS11400 IPR001204 Phosphate transporter DOE60_RS11405 IPR023166 HI0933-like insert domain superfamily DOE60_RS11405 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like DOE60_RS11405 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS11410 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE60_RS11415 IPR000412 ABC-2 transporter DOE60_RS11415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11415 IPR003439 ABC transporter-like DOE60_RS11415 IPR003593 AAA+ ATPase domain DOE60_RS11415 IPR017871 ABC transporter, conserved site DOE60_RS11420 IPR000412 ABC-2 transporter DOE60_RS11425 IPR013321 Arc-type ribbon-helix-helix DOE60_RS11425 IPR002145 Ribbon-helix-helix protein, CopG DOE60_RS11425 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DOE60_RS11425 IPR022988 Nickel-responsive transcriptional regulator NikR DOE60_RS11425 IPR014864 Transcription factor, NikR, nickel binding C-terminal DOE60_RS11425 IPR010985 Ribbon-helix-helix DOE60_RS11425 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria DOE60_RS11430 IPR008278 4'-phosphopantetheinyl transferase domain DOE60_RS11430 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE60_RS11435 IPR002549 Transmembrane protein TqsA-like DOE60_RS11440 IPR023008 Uncharacterized MFS-type transporter YhhS-like DOE60_RS11440 IPR011701 Major facilitator superfamily DOE60_RS11440 IPR020846 Major facilitator superfamily domain DOE60_RS11440 IPR036259 MFS transporter superfamily DOE60_RS11445 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich DOE60_RS11445 IPR014894 Protein DcrB DOE60_RS11450 IPR003744 Queuosine precursor transporter DOE60_RS11455 IPR001455 TusA-like domain DOE60_RS11455 IPR022931 Sulfur carrier protein TusA DOE60_RS11455 IPR036868 TusA-like domain superfamily DOE60_RS11460 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS11460 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS11460 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS11460 IPR003660 HAMP domain DOE60_RS11460 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS11460 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS11465 IPR027256 P-type ATPase, subfamily IB DOE60_RS11465 IPR008250 P-type ATPase, A domain superfamily DOE60_RS11465 IPR023299 P-type ATPase, cytoplasmic domain N DOE60_RS11465 IPR018303 P-type ATPase, phosphorylation site DOE60_RS11465 IPR023298 P-type ATPase, transmembrane domain superfamily DOE60_RS11465 IPR036412 HAD-like superfamily DOE60_RS11465 IPR023214 HAD superfamily DOE60_RS11465 IPR017969 Heavy-metal-associated, conserved site DOE60_RS11465 IPR006121 Heavy metal-associated domain, HMA DOE60_RS11465 IPR036163 Heavy metal-associated domain superfamily DOE60_RS11465 IPR001757 P-type ATPase DOE60_RS11470 IPR012506 YhhN-like DOE60_RS11475 IPR019635 Protein of unknown function DUF2500 DOE60_RS11480 IPR009525 Protein of unknown function DUF1145 DOE60_RS11485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS11485 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS11485 IPR004398 RNA methyltransferase, RsmD DOE60_RS11490 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOE60_RS11490 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOE60_RS11490 IPR036225 SRP/SRP receptor, N-terminal DOE60_RS11490 IPR004390 Signal-recognition particle receptor FtsY DOE60_RS11490 IPR013822 Signal recognition particle SRP54, helical bundle DOE60_RS11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11490 IPR003593 AAA+ ATPase domain DOE60_RS11495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11495 IPR005286 Cell division protein FtsE, ATP-binding DOE60_RS11495 IPR017871 ABC transporter, conserved site DOE60_RS11495 IPR003439 ABC transporter-like DOE60_RS11495 IPR003593 AAA+ ATPase domain DOE60_RS11500 IPR040690 FtsX, extracellular domain DOE60_RS11500 IPR003838 ABC transporter permease protein domain DOE60_RS11500 IPR004513 Cell division protein FtsX DOE60_RS11505 IPR007627 RNA polymerase sigma-70 region 2 DOE60_RS11505 IPR013325 RNA polymerase sigma factor, region 2 DOE60_RS11505 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE60_RS11505 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria DOE60_RS11505 IPR000943 RNA polymerase sigma-70 DOE60_RS11505 IPR014284 RNA polymerase sigma-70 like domain DOE60_RS11505 IPR007630 RNA polymerase sigma-70 region 4 DOE60_RS11510 IPR000709 Leu/Ile/Val-binding protein DOE60_RS11510 IPR028082 Periplasmic binding protein-like I DOE60_RS11510 IPR028081 Leucine-binding protein domain DOE60_RS11520 IPR007156 LemA DOE60_RS11520 IPR023353 LemA-like domain superfamily DOE60_RS11525 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS11525 IPR000182 GNAT domain DOE60_RS11525 IPR032900 PanD regulatory factor PanZ DOE60_RS11525 IPR040448 PanZ, acetyltransferase (GNAT) domain DOE60_RS11530 IPR028081 Leucine-binding protein domain DOE60_RS11530 IPR028082 Periplasmic binding protein-like I DOE60_RS11530 IPR000709 Leu/Ile/Val-binding protein DOE60_RS11535 IPR001851 ABC transporter, permease DOE60_RS11540 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal DOE60_RS11540 IPR001851 ABC transporter, permease DOE60_RS11545 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE60_RS11545 IPR003593 AAA+ ATPase domain DOE60_RS11545 IPR003439 ABC transporter-like DOE60_RS11545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11545 IPR017871 ABC transporter, conserved site DOE60_RS11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11550 IPR017871 ABC transporter, conserved site DOE60_RS11550 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DOE60_RS11550 IPR003439 ABC transporter-like DOE60_RS11550 IPR003593 AAA+ ATPase domain DOE60_RS11560 IPR006061 Solute-binding family 1, conserved site DOE60_RS11560 IPR006059 Bacterial extracellular solute-binding protein DOE60_RS11565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS11565 IPR035906 MetI-like superfamily DOE60_RS11570 IPR035906 MetI-like superfamily DOE60_RS11570 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE DOE60_RS11570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS11575 IPR003593 AAA+ ATPase domain DOE60_RS11575 IPR003439 ABC transporter-like DOE60_RS11575 IPR017871 ABC transporter, conserved site DOE60_RS11575 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS11575 IPR040582 MalK, OB fold domain DOE60_RS11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11575 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC DOE60_RS11580 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DOE60_RS11580 IPR030395 Glycerophosphodiester phosphodiesterase domain DOE60_RS11585 IPR020158 Protein of unknown function DUF2756 DOE60_RS11590 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS11590 IPR000101 Gamma-glutamyltranspeptidase DOE60_RS11600 IPR029082 Immunity protein 35 DOE60_RS11605 IPR008514 Type VI secretion system effector, Hcp DOE60_RS11605 IPR036624 Hcp1-like superfamily DOE60_RS11605 IPR003615 HNH nuclease DOE60_RS11610 IPR004104 Oxidoreductase, C-terminal DOE60_RS11610 IPR036291 NAD(P)-binding domain superfamily DOE60_RS11610 IPR000683 Oxidoreductase, N-terminal DOE60_RS11615 IPR012093 Pirin DOE60_RS11615 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DOE60_RS11615 IPR011051 RmlC-like cupin domain superfamily DOE60_RS11615 IPR014710 RmlC-like jelly roll fold DOE60_RS11615 IPR003829 Pirin, N-terminal domain DOE60_RS11620 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS11620 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE60_RS11620 IPR000843 LacI-type HTH domain DOE60_RS11620 IPR028082 Periplasmic binding protein-like I DOE60_RS11625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11625 IPR031322 Shikimate kinase/gluconokinase DOE60_RS11625 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DOE60_RS11630 IPR003474 Gluconate transporter DOE60_RS11640 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE60_RS11640 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE60_RS11640 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site DOE60_RS11640 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type DOE60_RS11640 IPR012080 Aspartate-semialdehyde dehydrogenase DOE60_RS11640 IPR036291 NAD(P)-binding domain superfamily DOE60_RS11645 IPR014756 Immunoglobulin E-set DOE60_RS11645 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE60_RS11645 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS11645 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB DOE60_RS11645 IPR037439 1,4-alpha-glucan-branching enzyme DOE60_RS11645 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta DOE60_RS11645 IPR013783 Immunoglobulin-like fold DOE60_RS11645 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS11645 IPR017853 Glycoside hydrolase superfamily DOE60_RS11650 IPR022844 Glycogen debranching enzyme, bacterial DOE60_RS11650 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS11650 IPR011837 Glycogen debranching enzyme, GlgX type DOE60_RS11650 IPR014756 Immunoglobulin E-set DOE60_RS11650 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE60_RS11650 IPR017853 Glycoside hydrolase superfamily DOE60_RS11650 IPR013783 Immunoglobulin-like fold DOE60_RS11650 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS11650 IPR040784 Glycogen debranching enzyme, C-terminal domain DOE60_RS11655 IPR011831 Glucose-1-phosphate adenylyltransferase DOE60_RS11655 IPR005836 ADP-glucose pyrophosphorylase, conserved site DOE60_RS11655 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial DOE60_RS11655 IPR005835 Nucleotidyl transferase domain DOE60_RS11655 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS11655 IPR011004 Trimeric LpxA-like superfamily DOE60_RS11660 IPR011835 Bacterial/plant glycogen synthase DOE60_RS11660 IPR013534 Starch synthase, catalytic domain DOE60_RS11660 IPR001296 Glycosyl transferase, family 1 DOE60_RS11665 IPR011833 Glycogen/starch/alpha-glucan phosphorylase DOE60_RS11665 IPR000811 Glycosyl transferase, family 35 DOE60_RS11665 IPR035090 Phosphorylase pyridoxal-phosphate attachment site DOE60_RS11670 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily DOE60_RS11670 IPR031656 Alpha-glycerophosphate oxidase, C-terminal DOE60_RS11670 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DOE60_RS11670 IPR006076 FAD dependent oxidoreductase DOE60_RS11670 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS11675 IPR001763 Rhodanese-like domain DOE60_RS11675 IPR036873 Rhodanese-like domain superfamily DOE60_RS11675 IPR023695 Thiosulfate sulfurtransferase, bacterial DOE60_RS11680 IPR022764 Peptidase S54, rhomboid domain DOE60_RS11680 IPR022732 Peptidase S54, GlpG peptidase, N-terminal DOE60_RS11680 IPR038236 GlpG peptidase, N-terminal domain superfamily DOE60_RS11680 IPR035952 Rhomboid-like superfamily DOE60_RS11680 IPR023662 Rhomboid protease GlpG DOE60_RS11685 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11685 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS11685 IPR037171 NagB/RpiA transferase-like DOE60_RS11685 IPR001034 DeoR-type HTH domain DOE60_RS11685 IPR014036 DeoR C-terminal sensor domain DOE60_RS11685 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11690 IPR003593 AAA+ ATPase domain DOE60_RS11690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS11690 IPR009715 Regulator of RNA terminal phosphate cyclase DOE60_RS11690 IPR017183 Sigma54-dependent transcriptional activator, RtcR DOE60_RS11690 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11695 IPR036025 tRNA-splicing ligase RtcB-like superfamily DOE60_RS11695 IPR001233 tRNA-splicing ligase, RtcB DOE60_RS11700 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily DOE60_RS11700 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOE60_RS11700 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain DOE60_RS11700 IPR000228 RNA 3'-terminal phosphate cyclase DOE60_RS11700 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily DOE60_RS11700 IPR023797 RNA 3'-terminal phosphate cyclase domain DOE60_RS11700 IPR017770 RNA 3'-terminal phosphate cyclase type 1 DOE60_RS11705 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS11705 IPR023768 Transcriptional regulator HTH-type, MalT DOE60_RS11705 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS11705 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS11705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11705 IPR041617 MalT-like TPR region DOE60_RS11705 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11720 IPR000811 Glycosyl transferase, family 35 DOE60_RS11720 IPR035090 Phosphorylase pyridoxal-phosphate attachment site DOE60_RS11720 IPR011833 Glycogen/starch/alpha-glucan phosphorylase DOE60_RS11725 IPR017853 Glycoside hydrolase superfamily DOE60_RS11725 IPR003385 Glycoside hydrolase, family 77 DOE60_RS11730 IPR003474 Gluconate transporter DOE60_RS11735 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal DOE60_RS11735 IPR035903 HesB-like domain superfamily DOE60_RS11735 IPR034904 Fe-S cluster assembly domain superfamily DOE60_RS11735 IPR000361 FeS cluster biogenesis DOE60_RS11735 IPR017726 Fe/S biogenesis protein NfuA DOE60_RS11740 IPR000836 Phosphoribosyltransferase domain DOE60_RS11740 IPR029057 Phosphoribosyltransferase-like DOE60_RS11740 IPR005222 Competence protein ComF DOE60_RS11745 IPR029058 Alpha/Beta hydrolase fold DOE60_RS11745 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS11745 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase DOE60_RS11750 IPR006842 Transposase (putative), YhgA-like DOE60_RS11750 IPR010106 Recombination-promoting nuclease RpnA DOE60_RS11755 IPR023732 Probable [Fe-S]-dependent transcriptional repressor DOE60_RS11755 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11755 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11755 IPR015102 Transcriptional regulator HTH-type, FeoC DOE60_RS11760 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DOE60_RS11760 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE60_RS11760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11760 IPR005225 Small GTP-binding protein domain DOE60_RS11760 IPR041069 FeoB, cytosolic helical domain DOE60_RS11760 IPR011640 Ferrous iron transport protein B, C-terminal DOE60_RS11760 IPR003373 Ferrous iron transport protein B DOE60_RS11765 IPR008988 Transcriptional repressor, C-terminal DOE60_RS11765 IPR038157 Ferrous iron transporter, core domain DOE60_RS11765 IPR007167 Ferrous iron transporter FeoA domain DOE60_RS11775 IPR006641 YqgF/RNase H-like domain DOE60_RS11775 IPR032639 Tex protein, YqgF-like domain DOE60_RS11775 IPR018974 Tex-like protein, N-terminal DOE60_RS11775 IPR037027 YqgF/RNase H-like domain superfamily DOE60_RS11775 IPR023319 Tex-like protein, HTH domain superfamily DOE60_RS11775 IPR003029 S1 domain DOE60_RS11775 IPR022967 RNA-binding domain, S1 DOE60_RS11775 IPR041692 HHH domain 9 DOE60_RS11775 IPR012337 Ribonuclease H-like superfamily DOE60_RS11775 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS11775 IPR010994 RuvA domain 2-like DOE60_RS11775 IPR023323 Tex-like domain superfamily DOE60_RS11780 IPR023459 Transcription elongation factor GreA/GreB family DOE60_RS11780 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOE60_RS11780 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE60_RS11780 IPR028624 Transcription elongation factor GreA/GreB DOE60_RS11780 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOE60_RS11780 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOE60_RS11780 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE60_RS11780 IPR006358 Transcription elongation factor GreB DOE60_RS11785 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS11785 IPR011006 CheY-like superfamily DOE60_RS11785 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS11785 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11785 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS11785 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS11790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS11790 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS11790 IPR003660 HAMP domain DOE60_RS11790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS11790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS11790 IPR005467 Histidine kinase domain DOE60_RS11790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS11795 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal DOE60_RS11795 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal DOE60_RS11795 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising DOE60_RS11795 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site DOE60_RS11800 IPR025291 Protein of unknown function DUF4153 DOE60_RS11805 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DOE60_RS11805 IPR016153 Heat shock protein Hsp33, N-terminal DOE60_RS11805 IPR016154 Heat shock protein Hsp33, C-terminal DOE60_RS11805 IPR000397 Heat shock protein Hsp33 DOE60_RS11810 IPR036986 RNA-binding S4 domain superfamily DOE60_RS11810 IPR025708 Heat shock protein 15 DOE60_RS11810 IPR002942 RNA-binding S4 domain DOE60_RS11815 IPR036412 HAD-like superfamily DOE60_RS11815 IPR006439 HAD hydrolase, subfamily IA DOE60_RS11815 IPR023214 HAD superfamily DOE60_RS11815 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS11820 IPR010771 Intracellular growth attenuator IgaA DOE60_RS11825 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS11825 IPR020084 NUDIX hydrolase, conserved site DOE60_RS11825 IPR000086 NUDIX hydrolase domain DOE60_RS11830 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS11830 IPR001264 Glycosyl transferase, family 51 DOE60_RS11830 IPR023346 Lysozyme-like domain superfamily DOE60_RS11830 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS11830 IPR031376 Penicillin-binding protein, OB-like domain DOE60_RS11830 IPR036950 Penicillin binding protein transglycosylase domain DOE60_RS11840 IPR007813 Fimbrial assembly PilN DOE60_RS11850 IPR019684 HofP protein DOE60_RS11855 IPR004846 Type II/III secretion system DOE60_RS11855 IPR013355 Type IV pilus secretin PilQ DOE60_RS11855 IPR005644 NolW-like DOE60_RS11855 IPR001775 GspD/PilQ family DOE60_RS11855 IPR004845 Type II secretion system GspD, conserved site DOE60_RS11855 IPR011662 Secretin/TonB, short N-terminal domain DOE60_RS11855 IPR038591 NolW-like superfamily DOE60_RS11865 IPR023000 Shikimate kinase, conserved site DOE60_RS11865 IPR000623 Shikimate kinase/Threonine synthase-like 1 DOE60_RS11865 IPR031322 Shikimate kinase/gluconokinase DOE60_RS11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11870 IPR016037 3-dehydroquinate synthase AroB DOE60_RS11870 IPR030963 3-dehydroquinate synthase family DOE60_RS11870 IPR030960 3-dehydroquinate synthase domain DOE60_RS11875 IPR032899 Cell division protein DamX DOE60_RS11875 IPR007730 Sporulation-like domain DOE60_RS11875 IPR036680 Sporulation-like domain superfamily DOE60_RS11880 IPR012263 Adenine modification methylase, M.EcoRV-type DOE60_RS11880 IPR012327 D12 class N6 adenine-specific DNA methyltransferase DOE60_RS11880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS11880 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS11880 IPR023095 Adenine-specific methyltransferase, domain 2 DOE60_RS11885 IPR013785 Aldolase-type TIM barrel DOE60_RS11885 IPR026019 Ribulose-phosphate 3-epimerase DOE60_RS11885 IPR011060 Ribulose-phosphate binding barrel DOE60_RS11885 IPR000056 Ribulose-phosphate 3-epimerase-like DOE60_RS11890 IPR036412 HAD-like superfamily DOE60_RS11890 IPR037512 Phosphoglycolate phosphatase, prokaryotic DOE60_RS11890 IPR006439 HAD hydrolase, subfamily IA DOE60_RS11890 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS11890 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DOE60_RS11890 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS11890 IPR023214 HAD superfamily DOE60_RS11895 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS11895 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE60_RS11895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS11895 IPR024109 Tryptophan-tRNA ligase, bacterial-type DOE60_RS11895 IPR002306 Tryptophan-tRNA ligase DOE60_RS11900 IPR025318 Protein of unknown function DUF4223 DOE60_RS11905 IPR036709 Autotransporter beta-domain superfamily DOE60_RS11905 IPR005546 Autotransporter beta-domain DOE60_RS11910 IPR036291 NAD(P)-binding domain superfamily DOE60_RS11910 IPR006366 Uroporphyrin-III C-methyltransferase DOE60_RS11910 IPR012409 Sirohaem synthase DOE60_RS11910 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE60_RS11910 IPR037115 Sirohaem synthase, dimerisation domain superfamily DOE60_RS11910 IPR028281 Siroheme synthase, central domain DOE60_RS11910 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE60_RS11910 IPR006367 Sirohaem synthase, N-terminal DOE60_RS11910 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS11910 IPR000878 Tetrapyrrole methylase DOE60_RS11910 IPR019478 Sirohaem synthase, dimerisation domain DOE60_RS11910 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS11915 IPR023271 Aquaporin-like DOE60_RS11915 IPR024002 Formate/nitrite transporter, conserved site DOE60_RS11915 IPR000292 Formate/nitrite transporter DOE60_RS11920 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOE60_RS11920 IPR017881 Nitrite reductase (NADH) small subunit DOE60_RS11920 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type DOE60_RS11925 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB DOE60_RS11925 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE60_RS11925 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE60_RS11925 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE60_RS11925 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS11925 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE60_RS11925 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal DOE60_RS11925 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE60_RS11925 IPR017121 Nitrite reductase [NAD(P)H], large subunit DOE60_RS11925 IPR007419 BFD-like [2Fe-2S]-binding domain DOE60_RS11925 IPR023753 FAD/NAD(P)-binding domain DOE60_RS11930 IPR023528 Major facilitator superfamily transporter, TsgA DOE60_RS11930 IPR011701 Major facilitator superfamily DOE60_RS11930 IPR020846 Major facilitator superfamily domain DOE60_RS11930 IPR036259 MFS transporter superfamily DOE60_RS11935 IPR029000 Cyclophilin-like domain superfamily DOE60_RS11935 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS11935 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOE60_RS11940 IPR022541 Protein of unknown function DUF2559 DOE60_RS11945 IPR036597 Fido-like domain superfamily DOE60_RS11945 IPR003812 Fido domain DOE60_RS11950 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DOE60_RS11950 IPR029062 Class I glutamine amidotransferase-like DOE60_RS11950 IPR017926 Glutamine amidotransferase DOE60_RS11955 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DOE60_RS11955 IPR005814 Aminotransferase class-III DOE60_RS11955 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS11955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS11955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS11955 IPR004636 Acetylornithine/Succinylornithine transaminase family DOE60_RS11960 IPR010020 Integral membrane protein, YccS/YhfK DOE60_RS11960 IPR032692 Integral membrane protein YccS, N-terminal DOE60_RS11965 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS11965 IPR012318 Crp-type HTH domain DOE60_RS11965 IPR018490 Cyclic nucleotide-binding-like DOE60_RS11965 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOE60_RS11965 IPR018488 Cyclic nucleotide-binding, conserved site DOE60_RS11965 IPR014710 RmlC-like jelly roll fold DOE60_RS11965 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS11965 IPR000595 Cyclic nucleotide-binding domain DOE60_RS11970 IPR015946 K homology domain-like, alpha/beta DOE60_RS11970 IPR003718 OsmC/Ohr family DOE60_RS11970 IPR036102 OsmC/Ohr superfamily DOE60_RS11975 IPR006083 Phosphoribulokinase/uridine kinase DOE60_RS11975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS11975 IPR006082 Phosphoribulokinase DOE60_RS11980 IPR010648 Uncharacterised protein family UPF0270 DOE60_RS11980 IPR036685 YehU-like superfamily DOE60_RS11985 IPR000952 AB hydrolase 4, conserved site DOE60_RS11985 IPR012020 AB hydrolase 4 family DOE60_RS11985 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS11985 IPR029058 Alpha/Beta hydrolase fold DOE60_RS11990 IPR014910 Putative monooxygenase YdhR DOE60_RS11990 IPR011008 Dimeric alpha-beta barrel DOE60_RS11995 IPR037171 NagB/RpiA transferase-like DOE60_RS11995 IPR005777 Acetyl-S-ACP:malonate ACP transferase DOE60_RS12000 IPR017555 Triphosphoribosyl-dephospho-CoA synthase DOE60_RS12000 IPR002736 Triphosphoribosyl-dephospho-CoA protein DOE60_RS12005 IPR009662 Malonate decarboxylase delta subunit DOE60_RS12005 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DOE60_RS12010 IPR034733 Acetyl-CoA carboxylase DOE60_RS12010 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS12010 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOE60_RS12010 IPR017556 Biotin-independent malonate decarboxylase, beta subunit DOE60_RS12015 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit DOE60_RS12015 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS12015 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DOE60_RS12020 IPR004776 Membrane transport protein DOE60_RS12020 IPR014024 Auxin efflux carrier, plant type DOE60_RS12025 IPR017557 Phosphoribosyl-dephospho-CoA transferase DOE60_RS12030 IPR001227 Acyl transferase domain superfamily DOE60_RS12030 IPR014043 Acyl transferase DOE60_RS12030 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE60_RS12030 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOE60_RS12030 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DOE60_RS12030 IPR024925 Malonyl CoA-acyl carrier protein transacylase DOE60_RS12035 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS12035 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain DOE60_RS12035 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS12035 IPR000847 Transcription regulator HTH, LysR DOE60_RS12035 IPR005119 LysR, substrate-binding DOE60_RS12040 IPR032781 ABC-transporter extension domain DOE60_RS12040 IPR003439 ABC transporter-like DOE60_RS12040 IPR003593 AAA+ ATPase domain DOE60_RS12040 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12040 IPR017871 ABC transporter, conserved site DOE60_RS12045 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG DOE60_RS12045 IPR003680 Flavodoxin-like fold DOE60_RS12045 IPR029039 Flavoprotein-like superfamily DOE60_RS12050 IPR003148 Regulator of K+ conductance, N-terminal DOE60_RS12050 IPR036291 NAD(P)-binding domain superfamily DOE60_RS12050 IPR006036 Potassium uptake protein TrkA DOE60_RS12050 IPR020884 Glutathione-regulated potassium-efflux system protein KefB DOE60_RS12050 IPR004771 K+/H+ exchanger DOE60_RS12050 IPR006153 Cation/H+ exchanger DOE60_RS12050 IPR038770 Sodium/solute symporter superfamily DOE60_RS12055 IPR012658 Conserved hypothetical protein CHP02443 DOE60_RS12060 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS12070 IPR007236 SlyX DOE60_RS12075 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE60_RS12075 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOE60_RS12075 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOE60_RS12080 IPR013559 YheO-like DOE60_RS12080 IPR039446 Transcriptional regulator DauR-like DOE60_RS12080 IPR039445 Transcriptional regulator DauR-like, HTH domain DOE60_RS12085 IPR003787 Sulphur relay, DsrE/F-like protein DOE60_RS12085 IPR027396 DsrEFH-like DOE60_RS12085 IPR017463 Sulphur relay, TusD/DsrE DOE60_RS12090 IPR027396 DsrEFH-like DOE60_RS12090 IPR003787 Sulphur relay, DsrE/F-like protein DOE60_RS12090 IPR037450 Sulphur relay, TusC DOE60_RS12090 IPR017462 Sulphur relay, TusC/DsrF DOE60_RS12095 IPR027396 DsrEFH-like DOE60_RS12095 IPR023526 Sulphur relay, TusB DOE60_RS12095 IPR007215 Sulphur relay, TusB/DsrH DOE60_RS12100 IPR006032 Ribosomal protein S12/S23 DOE60_RS12100 IPR005679 Ribosomal protein S12, bacterial-type DOE60_RS12100 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12105 IPR020606 Ribosomal protein S7, conserved site DOE60_RS12105 IPR023798 Ribosomal protein S7 domain DOE60_RS12105 IPR005717 Ribosomal protein S7, bacterial/organellar-type DOE60_RS12105 IPR000235 Ribosomal protein S5/S7 DOE60_RS12105 IPR036823 Ribosomal protein S7 domain superfamily DOE60_RS12110 IPR005517 Translation elongation factor EFG/EF2, domain IV DOE60_RS12110 IPR041095 Elongation Factor G, domain II DOE60_RS12110 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS12110 IPR000795 Transcription factor, GTP-binding domain DOE60_RS12110 IPR005225 Small GTP-binding protein domain DOE60_RS12110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS12110 IPR009022 Elongation factor G, domain III DOE60_RS12110 IPR035647 EF-G domain III/V-like DOE60_RS12110 IPR035649 EFG, domain V DOE60_RS12110 IPR000640 Elongation factor EFG, domain V-like DOE60_RS12110 IPR004540 Translation elongation factor EFG/EF2 DOE60_RS12110 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS12110 IPR031157 Tr-type G domain, conserved site DOE60_RS12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12110 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS12115 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DOE60_RS12115 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOE60_RS12115 IPR000795 Transcription factor, GTP-binding domain DOE60_RS12115 IPR005225 Small GTP-binding protein domain DOE60_RS12115 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DOE60_RS12115 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS12115 IPR033720 Elongation factor Tu, domain 2 DOE60_RS12115 IPR031157 Tr-type G domain, conserved site DOE60_RS12115 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12115 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE60_RS12130 IPR007419 BFD-like [2Fe-2S]-binding domain DOE60_RS12130 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE60_RS12135 IPR009078 Ferritin-like superfamily DOE60_RS12135 IPR009040 Ferritin-like diiron domain DOE60_RS12135 IPR012347 Ferritin-like DOE60_RS12135 IPR002024 Bacterioferritin DOE60_RS12135 IPR008331 Ferritin/DPS protein domain DOE60_RS12140 IPR014032 Peptidase A24A, prepilin type IV, bacterial DOE60_RS12140 IPR000045 Prepilin type IV endopeptidase, peptidase domain DOE60_RS12150 IPR027486 Ribosomal protein S10 domain DOE60_RS12150 IPR001848 Ribosomal protein S10 DOE60_RS12150 IPR036838 Ribosomal protein S10 domain superfamily DOE60_RS12150 IPR018268 Ribosomal protein S10, conserved site DOE60_RS12155 IPR000597 Ribosomal protein L3 DOE60_RS12155 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS12155 IPR019927 Ribosomal protein L3, bacterial/organelle-type DOE60_RS12155 IPR019926 Ribosomal protein L3, conserved site DOE60_RS12160 IPR002136 Ribosomal protein L4/L1e DOE60_RS12160 IPR013005 50S ribosomal protein uL4 DOE60_RS12160 IPR023574 Ribosomal protein L4 domain superfamily DOE60_RS12165 IPR013025 Ribosomal protein L25/L23 DOE60_RS12165 IPR001014 Ribosomal protein L23/L25, conserved site DOE60_RS12165 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE60_RS12165 IPR012678 Ribosomal protein L23/L15e core domain superfamily DOE60_RS12170 IPR022669 Ribosomal protein L2, C-terminal DOE60_RS12170 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS12170 IPR005880 Ribosomal protein L2, bacterial/organellar-type DOE60_RS12170 IPR022671 Ribosomal protein L2, conserved site DOE60_RS12170 IPR002171 Ribosomal protein L2 DOE60_RS12170 IPR014722 Ribosomal protein L2, domain 2 DOE60_RS12170 IPR022666 Ribosomal Proteins L2, RNA binding domain DOE60_RS12170 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12170 IPR014726 Ribosomal protein L2, domain 3 DOE60_RS12175 IPR002222 Ribosomal protein S19/S15 DOE60_RS12175 IPR005732 Ribosomal protein S19, bacterial-type DOE60_RS12175 IPR023575 Ribosomal protein S19, superfamily DOE60_RS12175 IPR020934 Ribosomal protein S19 conserved site DOE60_RS12180 IPR018260 Ribosomal protein L22/L17, conserved site DOE60_RS12180 IPR036394 Ribosomal protein L22/L17 superfamily DOE60_RS12180 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DOE60_RS12180 IPR001063 Ribosomal protein L22/L17 DOE60_RS12185 IPR036419 Ribosomal protein S3, C-terminal domain superfamily DOE60_RS12185 IPR004087 K Homology domain DOE60_RS12185 IPR015946 K homology domain-like, alpha/beta DOE60_RS12185 IPR004044 K Homology domain, type 2 DOE60_RS12185 IPR009019 K homology domain superfamily, prokaryotic type DOE60_RS12185 IPR005704 Ribosomal protein S3, bacterial-type DOE60_RS12185 IPR018280 Ribosomal protein S3, conserved site DOE60_RS12185 IPR001351 Ribosomal protein S3, C-terminal DOE60_RS12190 IPR016180 Ribosomal protein L10e/L16 DOE60_RS12190 IPR036920 Ribosomal protein L10e/L16 superfamily DOE60_RS12190 IPR000114 Ribosomal protein L16 DOE60_RS12190 IPR020798 Ribosomal protein L16, conserved site DOE60_RS12195 IPR018254 Ribosomal protein L29, conserved site DOE60_RS12195 IPR036049 Ribosomal protein L29/L35 superfamily DOE60_RS12195 IPR001854 Ribosomal protein L29/L35 DOE60_RS12200 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12200 IPR019984 30S ribosomal protein S17 DOE60_RS12200 IPR000266 Ribosomal protein S17/S11 DOE60_RS12200 IPR019979 Ribosomal protein S17, conserved site DOE60_RS12205 IPR000218 Ribosomal protein L14P DOE60_RS12205 IPR036853 Ribosomal protein L14 superfamily DOE60_RS12205 IPR005745 Ribosomal protein L14P, bacterial-type DOE60_RS12205 IPR019972 Ribosomal protein L14P, conserved site DOE60_RS12210 IPR005824 KOW DOE60_RS12210 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS12210 IPR005825 Ribosomal protein L24/L26, conserved site DOE60_RS12210 IPR003256 Ribosomal protein L24 DOE60_RS12210 IPR014722 Ribosomal protein L2, domain 2 DOE60_RS12210 IPR041988 Ribosomal Protein L26/L24, KOW domain DOE60_RS12215 IPR002132 Ribosomal protein L5 DOE60_RS12215 IPR020930 Ribosomal protein L5, bacterial-type DOE60_RS12215 IPR031309 Ribosomal protein L5, C-terminal DOE60_RS12215 IPR020929 Ribosomal protein L5, conserved site DOE60_RS12215 IPR031310 Ribosomal protein L5, N-terminal DOE60_RS12215 IPR022803 Ribosomal protein L5 domain superfamily DOE60_RS12220 IPR018271 Ribosomal protein S14, conserved site DOE60_RS12220 IPR023036 Ribosomal protein S14, bacterial/plastid DOE60_RS12220 IPR001209 Ribosomal protein S14 DOE60_RS12225 IPR000630 Ribosomal protein S8 DOE60_RS12225 IPR035987 Ribosomal protein S8 superfamily DOE60_RS12230 IPR000702 Ribosomal protein L6 DOE60_RS12230 IPR020040 Ribosomal protein L6, alpha-beta domain DOE60_RS12230 IPR019906 Ribosomal protein L6, bacterial-type DOE60_RS12230 IPR002358 Ribosomal protein L6, conserved site DOE60_RS12230 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DOE60_RS12235 IPR005484 Ribosomal protein L18 DOE60_RS12235 IPR004389 Ribosomal protein L18, bacterial-type DOE60_RS12240 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS12240 IPR005324 Ribosomal protein S5, C-terminal DOE60_RS12240 IPR005712 Ribosomal protein S5, bacterial-type DOE60_RS12240 IPR000851 Ribosomal protein S5 DOE60_RS12240 IPR013810 Ribosomal protein S5, N-terminal DOE60_RS12240 IPR018192 Ribosomal protein S5, N-terminal, conserved site DOE60_RS12240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS12245 IPR018038 Ribosomal protein L30, conserved site DOE60_RS12245 IPR005996 Ribosomal protein L30, bacterial-type DOE60_RS12245 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DOE60_RS12245 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DOE60_RS12250 IPR005749 Ribosomal protein L15, bacterial-type DOE60_RS12250 IPR021131 Ribosomal protein L18e/L15P DOE60_RS12250 IPR001196 Ribosomal protein L15, conserved site DOE60_RS12250 IPR036227 Ribosomal L18e/L15P superfamily DOE60_RS12250 IPR030878 Ribosomal protein L15 DOE60_RS12255 IPR030659 SecY conserved site DOE60_RS12255 IPR002208 SecY/SEC61-alpha family DOE60_RS12255 IPR026593 Protein translocase subunit SecY DOE60_RS12255 IPR023201 SecY domain superfamily DOE60_RS12260 IPR035977 Ribosomal protein L36 superfamily DOE60_RS12260 IPR000473 Ribosomal protein L36 DOE60_RS12265 IPR001892 Ribosomal protein S13 DOE60_RS12265 IPR010979 Ribosomal protein S13-like, H2TH DOE60_RS12265 IPR019980 Ribosomal protein S13, bacterial-type DOE60_RS12265 IPR018269 Ribosomal protein S13, conserved site DOE60_RS12265 IPR027437 30s ribosomal protein S13, C-terminal DOE60_RS12270 IPR001971 Ribosomal protein S11 DOE60_RS12270 IPR019981 Ribosomal protein S11, bacterial-type DOE60_RS12270 IPR036967 Ribosomal protein S11 superfamily DOE60_RS12270 IPR018102 Ribosomal S11, conserved site DOE60_RS12275 IPR002942 RNA-binding S4 domain DOE60_RS12275 IPR001912 Ribosomal protein S4/S9, N-terminal DOE60_RS12275 IPR018079 Ribosomal protein S4, conserved site DOE60_RS12275 IPR005709 Ribosomal protein S4, bacterial-type DOE60_RS12275 IPR022801 Ribosomal protein S4/S9 DOE60_RS12275 IPR036986 RNA-binding S4 domain superfamily DOE60_RS12280 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DOE60_RS12280 IPR011262 DNA-directed RNA polymerase, insert domain DOE60_RS12280 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DOE60_RS12280 IPR011773 DNA-directed RNA polymerase, alpha subunit DOE60_RS12280 IPR036603 RNA polymerase, RBP11-like subunit DOE60_RS12280 IPR011260 RNA polymerase, alpha subunit, C-terminal DOE60_RS12285 IPR000456 Ribosomal protein L17 DOE60_RS12285 IPR036373 Ribosomal protein L17 superfamily DOE60_RS12290 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DOE60_RS12295 IPR009061 Putative DNA-binding domain superfamily DOE60_RS12295 IPR000551 MerR-type HTH domain DOE60_RS12295 IPR011788 Zn(II)-responsive transcriptional regulator DOE60_RS12300 IPR005589 Alternative ribosome-rescue factor A DOE60_RS12305 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DOE60_RS12305 IPR036019 Gated mechanosensitive channel DOE60_RS12305 IPR019823 Large-conductance mechanosensitive channel, conserved site DOE60_RS12305 IPR001185 Large-conductance mechanosensitive channel DOE60_RS12310 IPR006036 Potassium uptake protein TrkA DOE60_RS12310 IPR036291 NAD(P)-binding domain superfamily DOE60_RS12310 IPR006037 Regulator of K+ conductance, C-terminal DOE60_RS12310 IPR003148 Regulator of K+ conductance, N-terminal DOE60_RS12310 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE60_RS12315 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae DOE60_RS12315 IPR004573 rRNA small subunit methyltransferase B DOE60_RS12315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS12315 IPR023267 RNA (C5-cytosine) methyltransferase DOE60_RS12315 IPR035926 NusB-like superfamily DOE60_RS12315 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DOE60_RS12315 IPR006027 NusB/RsmB/TIM44 DOE60_RS12315 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DOE60_RS12320 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOE60_RS12320 IPR036477 Formyl transferase, N-terminal domain superfamily DOE60_RS12320 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOE60_RS12320 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DOE60_RS12320 IPR037022 Formyl transferase, C-terminal domain superfamily DOE60_RS12320 IPR002376 Formyl transferase, N-terminal DOE60_RS12320 IPR005793 Formyl transferase, C-terminal DOE60_RS12320 IPR005794 Methionyl-tRNA formyltransferase DOE60_RS12325 IPR036821 Peptide deformylase superfamily DOE60_RS12325 IPR023635 Peptide deformylase DOE60_RS12330 IPR003488 DNA recombination-mediator protein A DOE60_RS12330 IPR041614 DprA, winged helix domain DOE60_RS12330 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS12335 IPR007456 Smg DOE60_RS12340 IPR000380 DNA topoisomerase, type IA DOE60_RS12340 IPR013498 DNA topoisomerase, type IA, zn finger DOE60_RS12345 IPR006070 YrdC-like domain DOE60_RS12345 IPR023535 Threonylcarbamoyl-AMP synthase DOE60_RS12345 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE60_RS12350 IPR036291 NAD(P)-binding domain superfamily DOE60_RS12350 IPR011342 Shikimate dehydrogenase DOE60_RS12350 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DOE60_RS12350 IPR022893 Shikimate dehydrogenase family DOE60_RS12350 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE60_RS12350 IPR041121 SDH, C-terminal DOE60_RS12355 IPR009962 Protein of unknown function DUF1488 DOE60_RS12355 IPR036692 Shew3726-like superfamily DOE60_RS12360 IPR001451 Hexapeptide repeat DOE60_RS12360 IPR011004 Trimeric LpxA-like superfamily DOE60_RS12400 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS12400 IPR001036 Acriflavin resistance protein DOE60_RS12400 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE60_RS12405 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS12405 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS12410 IPR013572 Transcription regulator MAATS, C-terminal DOE60_RS12410 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS12410 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS12410 IPR009057 Homeobox-like domain superfamily DOE60_RS12410 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS12415 IPR005330 MHYT domain DOE60_RS12415 IPR029787 Nucleotide cyclase DOE60_RS12415 IPR035919 EAL domain superfamily DOE60_RS12415 IPR001633 EAL domain DOE60_RS12415 IPR000160 GGDEF domain DOE60_RS12420 IPR022540 Protein of unknown function DUF2556 DOE60_RS12425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS12425 IPR001091 Restriction/modification DNA-methylase DOE60_RS12425 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS12425 IPR002941 DNA methylase N-4/N-6 DOE60_RS12430 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS12430 IPR009057 Homeobox-like domain superfamily DOE60_RS12430 IPR005412 DNA-binding protein Fis DOE60_RS12435 IPR035587 DUS-like, FMN-binding domain DOE60_RS12435 IPR032887 tRNA-dihydrouridine synthase B DOE60_RS12435 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DOE60_RS12435 IPR001269 tRNA-dihydrouridine synthase DOE60_RS12435 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE60_RS12435 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DOE60_RS12435 IPR013785 Aldolase-type TIM barrel DOE60_RS12445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS12445 IPR004498 Ribosomal protein L11 methyltransferase DOE60_RS12450 IPR018212 Sodium/solute symporter, conserved site DOE60_RS12450 IPR038377 Sodium/glucose symporter superfamily DOE60_RS12450 IPR011849 Sodium/pantothenate symporter DOE60_RS12450 IPR001734 Sodium/solute symporter DOE60_RS12455 IPR010398 Protein of unknown function DUF997 DOE60_RS12460 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DOE60_RS12460 IPR011761 ATP-grasp fold DOE60_RS12460 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS12460 IPR005481 Biotin carboxylase-like, N-terminal domain DOE60_RS12460 IPR011054 Rudiment single hybrid motif DOE60_RS12460 IPR011764 Biotin carboxylation domain DOE60_RS12460 IPR005482 Biotin carboxylase, C-terminal DOE60_RS12460 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOE60_RS12460 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS12465 IPR001882 Biotin-binding site DOE60_RS12465 IPR001249 Acetyl-CoA biotin carboxyl carrier DOE60_RS12465 IPR000089 Biotin/lipoyl attachment DOE60_RS12465 IPR011053 Single hybrid motif DOE60_RS12470 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ DOE60_RS12470 IPR013130 Ferric reductase transmembrane component-like domain DOE60_RS12475 IPR000572 Oxidoreductase, molybdopterin-binding domain DOE60_RS12475 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP DOE60_RS12475 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily DOE60_RS12475 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS12480 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS12480 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS12480 IPR014188 Acrylyl-CoA reductase AcuI DOE60_RS12480 IPR011032 GroES-like superfamily DOE60_RS12480 IPR036291 NAD(P)-binding domain superfamily DOE60_RS12480 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS12485 IPR001633 EAL domain DOE60_RS12485 IPR035919 EAL domain superfamily DOE60_RS12485 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 DOE60_RS12485 IPR029787 Nucleotide cyclase DOE60_RS12485 IPR000160 GGDEF domain DOE60_RS12500 IPR004753 Cell shape determining protein MreB DOE60_RS12505 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 DOE60_RS12505 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 DOE60_RS12505 IPR007221 Rod shape-determining protein MreC DOE60_RS12510 IPR007227 Cell shape-determining protein MreD DOE60_RS12510 IPR026034 Cell shape-determining protein MreD, proteobacterial type DOE60_RS12515 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOE60_RS12515 IPR029001 Inosine triphosphate pyrophosphatase-like DOE60_RS12520 IPR022967 RNA-binding domain, S1 DOE60_RS12520 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOE60_RS12520 IPR004659 Ribonuclease E/G DOE60_RS12520 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12520 IPR003029 S1 domain DOE60_RS12525 IPR025263 Domain of unknown function DUF3971 DOE60_RS12525 IPR032712 AsmA-like, C-terminal DOE60_RS12525 IPR011836 Conserved hypothetical protein CHP02099 DOE60_RS12530 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOE60_RS12530 IPR036059 Metalloprotease TldD/PmbA superfamily DOE60_RS12530 IPR002510 Metalloprotease TldD/PmbA DOE60_RS12530 IPR025502 TldD DOE60_RS12540 IPR012451 Protein of unknown function DUF1656 DOE60_RS12545 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE60_RS12545 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA DOE60_RS12545 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS12550 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE60_RS12550 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB DOE60_RS12555 IPR035905 Barstar-like superfamily DOE60_RS12555 IPR000468 Barstar (barnase inhibitor) DOE60_RS12560 IPR025543 Dodecin-like DOE60_RS12560 IPR010854 Domain of unknown function DUF1471 DOE60_RS12560 IPR036275 YdgH-like superfamily DOE60_RS12565 IPR025543 Dodecin-like DOE60_RS12565 IPR010854 Domain of unknown function DUF1471 DOE60_RS12565 IPR036275 YdgH-like superfamily DOE60_RS12570 IPR001669 Arginine repressor DOE60_RS12570 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS12570 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS12570 IPR020900 Arginine repressor, DNA-binding domain DOE60_RS12570 IPR036251 Arginine repressor, C-terminal domain superfamily DOE60_RS12570 IPR020899 Arginine repressor, C-terminal DOE60_RS12575 IPR022383 Lactate/malate dehydrogenase, C-terminal DOE60_RS12575 IPR001236 Lactate/malate dehydrogenase, N-terminal DOE60_RS12575 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE60_RS12575 IPR001252 Malate dehydrogenase, active site DOE60_RS12575 IPR010097 Malate dehydrogenase, type 1 DOE60_RS12575 IPR023958 Malate dehydrogenase, type 1, bacterial DOE60_RS12575 IPR036291 NAD(P)-binding domain superfamily DOE60_RS12575 IPR001557 L-lactate/malate dehydrogenase DOE60_RS12580 IPR036034 PDZ superfamily DOE60_RS12580 IPR001478 PDZ domain DOE60_RS12580 IPR001940 Peptidase S1C DOE60_RS12580 IPR011783 Peptidase S1C, DegS DOE60_RS12580 IPR009003 Peptidase S1, PA clan DOE60_RS12585 IPR001478 PDZ domain DOE60_RS12585 IPR009003 Peptidase S1, PA clan DOE60_RS12585 IPR001940 Peptidase S1C DOE60_RS12585 IPR011782 Peptidase S1C, Do DOE60_RS12585 IPR036034 PDZ superfamily DOE60_RS12590 IPR009386 Protein of unknown function DUF1043 DOE60_RS12595 IPR030870 Cell division protein ZapE DOE60_RS12595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12595 IPR005654 ATPase, AFG1-like DOE60_RS12600 IPR036899 Ribosomal protein L13 superfamily DOE60_RS12600 IPR023563 Ribosomal protein L13, conserved site DOE60_RS12600 IPR005823 Ribosomal protein L13, bacterial-type DOE60_RS12600 IPR005822 Ribosomal protein L13 DOE60_RS12605 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS12605 IPR000754 Ribosomal protein S9 DOE60_RS12605 IPR020574 Ribosomal protein S9, conserved site DOE60_RS12605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS12605 IPR023035 Ribosomal protein S9, bacterial/plastid DOE60_RS12615 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS12615 IPR040079 Glutathione Transferase family DOE60_RS12615 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS12615 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS12615 IPR034341 Stringent starvation protein A, N-terminal DOE60_RS12615 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS12615 IPR036249 Thioredoxin-like superfamily DOE60_RS12620 IPR007481 Stringent starvation protein B DOE60_RS12620 IPR036760 SspB-like superfamily DOE60_RS12625 IPR011711 GntR, C-terminal DOE60_RS12625 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS12625 IPR000524 Transcription regulator HTH, GntR DOE60_RS12625 IPR023730 HTH-type transcriptional repressor NanR DOE60_RS12625 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS12625 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS12630 IPR013785 Aldolase-type TIM barrel DOE60_RS12630 IPR020624 Schiff base-forming aldolase, conserved site DOE60_RS12630 IPR002220 DapA-like DOE60_RS12630 IPR020625 Schiff base-forming aldolase, active site DOE60_RS12630 IPR005264 N-acetylneuraminate lyase DOE60_RS12635 IPR011701 Major facilitator superfamily DOE60_RS12635 IPR020846 Major facilitator superfamily domain DOE60_RS12635 IPR036259 MFS transporter superfamily DOE60_RS12635 IPR004742 Sialic acid transporter DOE60_RS12640 IPR013785 Aldolase-type TIM barrel DOE60_RS12640 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase DOE60_RS12640 IPR011060 Ribulose-phosphate binding barrel DOE60_RS12645 IPR023945 N-acetylmannosamine kinase, bacterial DOE60_RS12645 IPR000600 ROK family DOE60_RS12650 IPR004375 YhcH/YjgK/YiaL family DOE60_RS12650 IPR037012 YhcH/YjgK/YiaL superfamily DOE60_RS12660 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS12660 IPR037224 PapC, N-terminal domain superfamily DOE60_RS12660 IPR025885 PapC, N-terminal domain DOE60_RS12660 IPR025949 PapC-like, C-terminal domain DOE60_RS12660 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS12660 IPR000015 Outer membrane usher protein DOE60_RS12665 IPR013783 Immunoglobulin-like fold DOE60_RS12665 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS12665 IPR008962 PapD-like superfamily DOE60_RS12665 IPR018046 Pili assembly chaperone, conserved site DOE60_RS12665 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS12665 IPR001829 Pili assembly chaperone, bacterial DOE60_RS12665 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS12670 IPR008966 Adhesion domain superfamily DOE60_RS12670 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS12670 IPR000259 Fimbrial-type adhesion domain DOE60_RS12675 IPR008966 Adhesion domain superfamily DOE60_RS12675 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS12675 IPR000259 Fimbrial-type adhesion domain DOE60_RS12680 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS12680 IPR008966 Adhesion domain superfamily DOE60_RS12680 IPR000259 Fimbrial-type adhesion domain DOE60_RS12685 IPR021407 Protein of unknown function DUF2544 DOE60_RS12690 IPR013108 Amidohydrolase 3 DOE60_RS12690 IPR032466 Metal-dependent hydrolase DOE60_RS12690 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS12695 IPR030191 Cytosine permease DOE60_RS12695 IPR001248 Purine-cytosine permease DOE60_RS12695 IPR038271 Purine-cytosine permease superfamily DOE60_RS12700 IPR009362 YhcG PDDEXK nuclease domain DOE60_RS12700 IPR041527 YhcG, N-terminal DOE60_RS12705 IPR023753 FAD/NAD(P)-binding domain DOE60_RS12705 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DOE60_RS12705 IPR009051 Alpha-helical ferredoxin DOE60_RS12705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS12705 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS12705 IPR028261 Dihydroprymidine dehydrogenase domain II DOE60_RS12710 IPR002932 Glutamate synthase domain DOE60_RS12710 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS12710 IPR013785 Aldolase-type TIM barrel DOE60_RS12710 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS12710 IPR002489 Glutamate synthase, alpha subunit, C-terminal DOE60_RS12710 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily DOE60_RS12710 IPR006982 Glutamate synthase, central-N DOE60_RS12725 IPR006638 Elp3/MiaB/NifB DOE60_RS12725 IPR005911 Protein YhcC-like DOE60_RS12725 IPR039661 ELP3/YhcC DOE60_RS12725 IPR032432 Radical SAM, C-terminal extension DOE60_RS12725 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS12725 IPR007197 Radical SAM DOE60_RS12730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS12730 IPR005467 Histidine kinase domain DOE60_RS12730 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS12730 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS12730 IPR011006 CheY-like superfamily DOE60_RS12730 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily DOE60_RS12730 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB DOE60_RS12730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE60_RS12730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS12730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS12730 IPR013767 PAS fold DOE60_RS12730 IPR035965 PAS domain superfamily DOE60_RS12730 IPR040642 Histidine kinase receptor ArcB, transmembrane domain DOE60_RS12730 IPR036641 HPT domain superfamily DOE60_RS12730 IPR000014 PAS domain DOE60_RS12730 IPR000700 PAS-associated, C-terminal DOE60_RS12730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS12735 IPR026041 Glyoxalase ElbB DOE60_RS12735 IPR029062 Class I glutamine amidotransferase-like DOE60_RS12740 IPR001264 Glycosyl transferase, family 51 DOE60_RS12740 IPR023346 Lysozyme-like domain superfamily DOE60_RS12740 IPR011812 Biosynthetic peptidoglycan transglycosylase DOE60_RS12740 IPR036950 Penicillin binding protein transglycosylase domain DOE60_RS12745 IPR019647 PhoP regulatory network protein YrbL DOE60_RS12745 IPR011009 Protein kinase-like domain superfamily DOE60_RS12750 IPR000032 Phosphocarrier protein HPr-like DOE60_RS12750 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE60_RS12750 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE60_RS12750 IPR035895 HPr-like superfamily DOE60_RS12755 IPR005337 RapZ-like family DOE60_RS12755 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12760 IPR016152 Phosphotransferase/anion transporter DOE60_RS12760 IPR002178 PTS EIIA type-2 domain DOE60_RS12760 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DOE60_RS12765 IPR003489 Ribosome hibernation promoting factor/RaiA DOE60_RS12765 IPR036567 Ribosome hibernation promotion factor-like DOE60_RS12770 IPR007634 RNA polymerase sigma factor 54, DNA-binding DOE60_RS12770 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DOE60_RS12770 IPR000394 RNA polymerase sigma factor 54 DOE60_RS12770 IPR007046 RNA polymerase sigma factor 54, core-binding domain DOE60_RS12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12775 IPR003593 AAA+ ATPase domain DOE60_RS12775 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DOE60_RS12775 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE60_RS12775 IPR017871 ABC transporter, conserved site DOE60_RS12775 IPR003439 ABC transporter-like DOE60_RS12780 IPR014340 Lipopolysaccharide export system protein LptA DOE60_RS12780 IPR005653 Organic solvent tolerance-like, N-terminal DOE60_RS12785 IPR026265 Lipopolysaccharide export system protein LptC DOE60_RS12785 IPR010664 Lipopolysaccharide assembly, LptC-related DOE60_RS12790 IPR036412 HAD-like superfamily DOE60_RS12790 IPR010023 KdsC family DOE60_RS12790 IPR023214 HAD superfamily DOE60_RS12795 IPR035474 KpsF-like, SIS domain DOE60_RS12795 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DOE60_RS12795 IPR001347 Sugar isomerase (SIS) DOE60_RS12795 IPR000644 CBS domain DOE60_RS12800 IPR004837 Sodium/calcium exchanger membrane region DOE60_RS12800 IPR004481 Sodium/potassium/calcium exchanger DOE60_RS12805 IPR003593 AAA+ ATPase domain DOE60_RS12805 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DOE60_RS12805 IPR017871 ABC transporter, conserved site DOE60_RS12805 IPR003439 ABC transporter-like DOE60_RS12805 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12810 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DOE60_RS12810 IPR030802 ABC transporter permease MalE DOE60_RS12815 IPR003399 Mce/MlaD DOE60_RS12815 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD DOE60_RS12820 IPR042245 Tgt2/MlaC superfamily DOE60_RS12820 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DOE60_RS12825 IPR036513 STAS domain superfamily DOE60_RS12825 IPR002645 STAS domain DOE60_RS12830 IPR002634 BolA protein DOE60_RS12830 IPR036065 BolA-like superfamily DOE60_RS12835 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DOE60_RS12835 IPR001986 Enolpyruvate transferase domain DOE60_RS12835 IPR036968 Enolpyruvate transferase domain superfamily DOE60_RS12835 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOE60_RS12840 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS12840 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DOE60_RS12845 IPR000092 Polyprenyl synthetase DOE60_RS12845 IPR008949 Isoprenoid synthase domain superfamily DOE60_RS12845 IPR033749 Polyprenyl synthetase, conserved site DOE60_RS12850 IPR018258 Ribosomal protein L21, conserved site DOE60_RS12850 IPR001787 Ribosomal protein L21 DOE60_RS12850 IPR028909 Ribosomal protein L21-like DOE60_RS12850 IPR036164 L21-like superfamily DOE60_RS12855 IPR018261 Ribosomal protein L27, conserved site DOE60_RS12855 IPR001684 Ribosomal protein L27 DOE60_RS12860 IPR000620 EamA domain DOE60_RS12865 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOE60_RS12865 IPR006074 GTP1/OBG, conserved site DOE60_RS12865 IPR006073 GTP binding domain DOE60_RS12865 IPR036726 GTP1/OBG domain superfamily DOE60_RS12865 IPR035101 GTP-binding protein, Obg-type DOE60_RS12865 IPR006169 GTP1/OBG domain DOE60_RS12865 IPR014100 GTP-binding protein Obg/CgtA DOE60_RS12865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12870 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS12870 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C DOE60_RS12875 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOE60_RS12875 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE60_RS12875 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOE60_RS12875 IPR023459 Transcription elongation factor GreA/GreB family DOE60_RS12875 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE60_RS12875 IPR028624 Transcription elongation factor GreA/GreB DOE60_RS12875 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOE60_RS12875 IPR006359 Transcription elongation factor GreA DOE60_RS12880 IPR001890 RNA-binding, CRM domain DOE60_RS12880 IPR035920 YhbY-like superfamily DOE60_RS12880 IPR017924 RNA-binding protein YhbY DOE60_RS12885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS12885 IPR015507 Ribosomal RNA large subunit methyltransferase E DOE60_RS12885 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOE60_RS12885 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria DOE60_RS12895 IPR041569 AAA ATPase, AAA+ lid domain DOE60_RS12895 IPR011546 Peptidase M41, FtsH extracellular DOE60_RS12895 IPR000642 Peptidase M41 DOE60_RS12895 IPR037219 Peptidase M41-like DOE60_RS12895 IPR003960 ATPase, AAA-type, conserved site DOE60_RS12895 IPR003959 ATPase, AAA-type, core DOE60_RS12895 IPR003593 AAA+ ATPase domain DOE60_RS12895 IPR005936 Peptidase, FtsH DOE60_RS12895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12900 IPR006390 Dihydropteroate synthase DOE60_RS12900 IPR011005 Dihydropteroate synthase-like DOE60_RS12900 IPR000489 Pterin-binding domain DOE60_RS12905 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE60_RS12905 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE60_RS12905 IPR006352 Phosphoglucosamine mutase, bacterial type DOE60_RS12905 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE60_RS12905 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE60_RS12905 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE60_RS12905 IPR005841 Alpha-D-phosphohexomutase superfamily DOE60_RS12905 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE60_RS12905 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE60_RS12910 IPR004692 Preprotein translocase SecG subunit DOE60_RS12920 IPR023437 Argininosuccinate synthase, type 2 subfamily DOE60_RS12920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS12920 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail DOE60_RS12920 IPR018223 Argininosuccinate synthase, conserved site DOE60_RS12920 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body DOE60_RS12920 IPR001518 Argininosuccinate synthase DOE60_RS12930 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DOE60_RS12930 IPR028989 Ribosome maturation factor RimP, N-terminal DOE60_RS12930 IPR035956 RimP, N-terminal domain superfamily DOE60_RS12930 IPR003728 Ribosome maturation factor RimP DOE60_RS12930 IPR028998 Ribosome maturation factor RimP, C-terminal DOE60_RS12935 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DOE60_RS12935 IPR022967 RNA-binding domain, S1 DOE60_RS12935 IPR013735 Transcription factor NusA, N-terminal DOE60_RS12935 IPR004087 K Homology domain DOE60_RS12935 IPR010213 Transcription termination factor NusA DOE60_RS12935 IPR015946 K homology domain-like, alpha/beta DOE60_RS12935 IPR025249 KH domain, NusA-like DOE60_RS12935 IPR009019 K homology domain superfamily, prokaryotic type DOE60_RS12935 IPR010214 Transcription termination factor NusA, C-terminal duplication DOE60_RS12935 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12935 IPR030842 Transcription termination/antitermination protein NusA, bacterial DOE60_RS12935 IPR036555 NusA, N-terminal domain superfamily DOE60_RS12935 IPR003029 S1 domain DOE60_RS12940 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DOE60_RS12940 IPR006847 Translation initiation factor IF-2, N-terminal DOE60_RS12940 IPR009061 Putative DNA-binding domain superfamily DOE60_RS12940 IPR013575 Initiation factor 2 associated domain, bacterial DOE60_RS12940 IPR023115 Translation initiation factor IF- 2, domain 3 DOE60_RS12940 IPR015760 Translation initiation factor IF- 2 DOE60_RS12940 IPR000178 Translation initiation factor aIF-2, bacterial-like DOE60_RS12940 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS12940 IPR000795 Transcription factor, GTP-binding domain DOE60_RS12940 IPR005225 Small GTP-binding protein domain DOE60_RS12940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12945 IPR015946 K homology domain-like, alpha/beta DOE60_RS12945 IPR023799 Ribosome-binding factor A domain superfamily DOE60_RS12945 IPR000238 Ribosome-binding factor A DOE60_RS12945 IPR020053 Ribosome-binding factor A, conserved site DOE60_RS12950 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS12950 IPR032819 tRNA pseudouridylate synthase B, C-terminal DOE60_RS12950 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal DOE60_RS12950 IPR014780 tRNA pseudouridine synthase II, TruB DOE60_RS12950 IPR036974 PUA domain superfamily DOE60_RS12950 IPR015947 PUA-like superfamily DOE60_RS12950 IPR002501 Pseudouridine synthase II, N-terminal DOE60_RS12955 IPR000589 Ribosomal protein S15 DOE60_RS12955 IPR005290 Ribosomal protein S15, bacterial-type DOE60_RS12955 IPR009068 S15/NS1, RNA-binding DOE60_RS12960 IPR004087 K Homology domain DOE60_RS12960 IPR036345 Exoribonuclease, PH domain 2 superfamily DOE60_RS12960 IPR004088 K Homology domain, type 1 DOE60_RS12960 IPR036612 K Homology domain, type 1 superfamily DOE60_RS12960 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS12960 IPR027408 PNPase/RNase PH domain superfamily DOE60_RS12960 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOE60_RS12960 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOE60_RS12960 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DOE60_RS12960 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily DOE60_RS12960 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS12960 IPR012162 Polyribonucleotide nucleotidyltransferase DOE60_RS12960 IPR022967 RNA-binding domain, S1 DOE60_RS12960 IPR003029 S1 domain DOE60_RS12965 IPR019734 Tetratricopeptide repeat DOE60_RS12965 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS12965 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS12965 IPR023605 Lipoprotein NlpI DOE60_RS12965 IPR013105 Tetratricopeptide repeat 2 DOE60_RS12970 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOE60_RS12970 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE60_RS12970 IPR001650 Helicase, C-terminal DOE60_RS12970 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS12970 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS12970 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE60_RS12970 IPR034415 CsdA, RNA recognition motif DOE60_RS12970 IPR028618 ATP-dependent RNA helicase DeaD DOE60_RS12970 IPR011545 DEAD/DEAH box helicase domain DOE60_RS12970 IPR021046 Cold-shock protein, DEAD box A, C-terminal DOE60_RS12970 IPR014014 RNA helicase, DEAD-box type, Q motif DOE60_RS12975 IPR013059 Tryptophan/tyrosine transporter DOE60_RS12975 IPR013061 Tryptophan/tryrosine permease, conserved site DOE60_RS12975 IPR018227 Amino acid/polyamine transporter 2 DOE60_RS12980 IPR011251 Luciferase-like domain DOE60_RS12980 IPR036661 Luciferase-like domain superfamily DOE60_RS12980 IPR019949 Luciferase family oxidoreductase, group 1 DOE60_RS12985 IPR001539 Peptidase U32 DOE60_RS12990 IPR001539 Peptidase U32 DOE60_RS12990 IPR036206 Thiamin phosphate synthase superfamily DOE60_RS12995 IPR003033 SCP2 sterol-binding domain DOE60_RS12995 IPR036527 SCP2 sterol-binding domain superfamily DOE60_RS12995 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT DOE60_RS12995 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 DOE60_RS13000 IPR000182 GNAT domain DOE60_RS13000 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS13005 IPR000305 GIY-YIG endonuclease DOE60_RS13005 IPR035901 GIY-YIG endonuclease superfamily DOE60_RS13005 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease DOE60_RS13010 IPR012349 FMN-binding split barrel DOE60_RS13010 IPR011194 Uncharacterised protein family UPF0306 DOE60_RS13015 IPR002818 DJ-1/PfpI DOE60_RS13015 IPR006286 Deglycase PfpI DOE60_RS13015 IPR029062 Class I glutamine amidotransferase-like DOE60_RS13020 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE60_RS13020 IPR016040 NAD(P)-binding domain DOE60_RS13020 IPR036291 NAD(P)-binding domain superfamily DOE60_RS13025 IPR007055 BON domain DOE60_RS13025 IPR014004 Transport-associated and nodulation domain, bacteria DOE60_RS13030 IPR023070 DnaA initiator-associating protein DOE60_RS13030 IPR035461 GmhA/DiaA DOE60_RS13030 IPR001347 Sugar isomerase (SIS) DOE60_RS13035 IPR011335 Restriction endonuclease type II-like DOE60_RS13035 IPR003509 Uncharacterised protein family UPF0102 DOE60_RS13035 IPR011856 tRNA endonuclease-like domain superfamily DOE60_RS13040 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS13040 IPR008939 Lytic transglycosylase, superhelical U-shaped DOE60_RS13040 IPR028082 Periplasmic binding protein-like I DOE60_RS13040 IPR007443 Penicillin-binding protein activator LpoA DOE60_RS13045 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE60_RS13045 IPR008189 rRNA small subunit methyltransferase I DOE60_RS13045 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DOE60_RS13045 IPR000878 Tetrapyrrole methylase DOE60_RS13045 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS13045 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS13060 IPR023353 LemA-like domain superfamily DOE60_RS13060 IPR007156 LemA DOE60_RS13070 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13070 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13070 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS13070 IPR001034 DeoR-type HTH domain DOE60_RS13075 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS13075 IPR011032 GroES-like superfamily DOE60_RS13075 IPR036291 NAD(P)-binding domain superfamily DOE60_RS13075 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS13075 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS13075 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS13080 IPR004703 Phosphotransferase system, sugar-specific permease component DOE60_RS13080 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS13080 IPR013853 Galactitol permease IIC component DOE60_RS13085 IPR036095 PTS system IIB component-like superfamily DOE60_RS13085 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS13085 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS13090 IPR016152 Phosphotransferase/anion transporter DOE60_RS13090 IPR002178 PTS EIIA type-2 domain DOE60_RS13095 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like DOE60_RS13095 IPR013785 Aldolase-type TIM barrel DOE60_RS13095 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ DOE60_RS13100 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY DOE60_RS13100 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY DOE60_RS13100 IPR000771 Fructose-bisphosphate aldolase, class-II DOE60_RS13100 IPR013785 Aldolase-type TIM barrel DOE60_RS13105 IPR007392 D-galactarate/Altronate dehydratase, C-terminal DOE60_RS13105 IPR017654 Galactarate dehydratase GarD-like DOE60_RS13105 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae DOE60_RS13105 IPR013974 SAF domain DOE60_RS13110 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS13110 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE60_RS13110 IPR017648 5-keto-4-deoxy-D-glucarate aldolase DOE60_RS13110 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS13115 IPR036291 NAD(P)-binding domain superfamily DOE60_RS13115 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE60_RS13115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS13115 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE60_RS13115 IPR006398 2-hydroxy-3-oxopropionate reductase DOE60_RS13115 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE60_RS13115 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE60_RS13115 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS13120 IPR036129 Glycerate kinase superfamily DOE60_RS13120 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE60_RS13120 IPR004381 Glycerate kinase DOE60_RS13120 IPR018193 Glycerate kinase, flavodoxin-like fold DOE60_RS13150 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13150 IPR000847 Transcription regulator HTH, LysR DOE60_RS13150 IPR005119 LysR, substrate-binding DOE60_RS13150 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13155 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS13155 IPR005789 Threonine dehydratase, catabolic DOE60_RS13155 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE60_RS13155 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS13160 IPR023726 Threonine/serine transporter TdcC DOE60_RS13160 IPR018227 Amino acid/polyamine transporter 2 DOE60_RS13160 IPR004694 Hydroxy amino acid transporter DOE60_RS13165 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE60_RS13165 IPR000890 Aliphatic acid kinase, short-chain DOE60_RS13165 IPR004372 Acetate/propionate kinase DOE60_RS13165 IPR024917 Propionate kinase DOE60_RS13170 IPR004184 Pyruvate formate lyase domain DOE60_RS13170 IPR001150 Glycine radical domain DOE60_RS13170 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE60_RS13170 IPR005949 Formate acetyltransferase DOE60_RS13175 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE60_RS13175 IPR005131 Serine dehydratase beta chain DOE60_RS13175 IPR029009 Allosteric substrate binding domain superfamily DOE60_RS13175 IPR005130 Serine dehydratase-like, alpha subunit DOE60_RS13185 IPR021144 Uncharacterised protein family UPF0597 DOE60_RS13185 IPR005130 Serine dehydratase-like, alpha subunit DOE60_RS13195 IPR003829 Pirin, N-terminal domain DOE60_RS13195 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DOE60_RS13195 IPR014710 RmlC-like jelly roll fold DOE60_RS13195 IPR011051 RmlC-like cupin domain superfamily DOE60_RS13195 IPR012093 Pirin DOE60_RS13200 IPR005119 LysR, substrate-binding DOE60_RS13200 IPR000847 Transcription regulator HTH, LysR DOE60_RS13200 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13200 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13205 IPR008523 Protein of unknown function DUF805 DOE60_RS13210 IPR016639 Glutathione S-transferase Omega/GSH DOE60_RS13210 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS13210 IPR040079 Glutathione Transferase family DOE60_RS13210 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS13210 IPR036249 Thioredoxin-like superfamily DOE60_RS13210 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS13215 IPR032808 DoxX family DOE60_RS13220 IPR025612 YqjK-like protein DOE60_RS13225 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III DOE60_RS13230 IPR010279 Inner membrane protein YqjD/ElaB DOE60_RS13235 IPR009468 Protein of unknown function DUF1090 DOE60_RS13240 IPR027398 SecD export protein N-terminal TM domain DOE60_RS13240 IPR026574 Modulator protein MzrA DOE60_RS13245 IPR032816 SNARE associated Golgi protein DOE60_RS13245 IPR032818 DedA family DOE60_RS13250 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13250 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS13250 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13250 IPR000524 Transcription regulator HTH, GntR DOE60_RS13250 IPR011711 GntR, C-terminal DOE60_RS13255 IPR011701 Major facilitator superfamily DOE60_RS13255 IPR020846 Major facilitator superfamily domain DOE60_RS13255 IPR036259 MFS transporter superfamily DOE60_RS13260 IPR003766 Uronate isomerase DOE60_RS13260 IPR032466 Metal-dependent hydrolase DOE60_RS13265 IPR007392 D-galactarate/Altronate dehydratase, C-terminal DOE60_RS13265 IPR013974 SAF domain DOE60_RS13275 IPR022369 Integral membrane protein TerC, riboswitch-linked DOE60_RS13275 IPR005496 Integral membrane protein TerC DOE60_RS13280 IPR036291 NAD(P)-binding domain superfamily DOE60_RS13280 IPR000683 Oxidoreductase, N-terminal DOE60_RS13285 IPR003848 Domain of unknown function DUF218 DOE60_RS13290 IPR002725 Protein of unknown function DUF45 DOE60_RS13295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS13295 IPR007848 Methyltransferase small domain DOE60_RS13295 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD DOE60_RS13295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS13300 IPR023753 FAD/NAD(P)-binding domain DOE60_RS13300 IPR013785 Aldolase-type TIM barrel DOE60_RS13300 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOE60_RS13300 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS13305 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS13305 IPR001661 Glycoside hydrolase, family 37 DOE60_RS13305 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS13315 IPR002293 Amino acid/polyamine transporter I DOE60_RS13320 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS13320 IPR017853 Glycoside hydrolase superfamily DOE60_RS13320 IPR004199 Beta galactosidase small chain/ domain 5 DOE60_RS13320 IPR008979 Galactose-binding-like domain superfamily DOE60_RS13320 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS13320 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase DOE60_RS13320 IPR023232 Glycoside hydrolase, family 2, active site DOE60_RS13320 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOE60_RS13320 IPR013783 Immunoglobulin-like fold DOE60_RS13320 IPR006101 Glycoside hydrolase, family 2 DOE60_RS13320 IPR032312 Beta-galactosidase, domain 4 DOE60_RS13320 IPR006104 Glycosyl hydrolases family 2, sugar binding domain DOE60_RS13320 IPR006103 Glycoside hydrolase family 2, catalytic domain DOE60_RS13320 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DOE60_RS13320 IPR023230 Glycoside hydrolase, family 2, conserved site DOE60_RS13325 IPR037012 YhcH/YjgK/YiaL superfamily DOE60_RS13325 IPR004375 YhcH/YjgK/YiaL family DOE60_RS13330 IPR028082 Periplasmic binding protein-like I DOE60_RS13330 IPR000843 LacI-type HTH domain DOE60_RS13330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS13335 IPR002547 tRNA-binding domain DOE60_RS13335 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS13340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS13340 IPR005814 Aminotransferase class-III DOE60_RS13340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS13340 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS13340 IPR017747 Putrescine aminotransferase DOE60_RS13350 IPR000014 PAS domain DOE60_RS13350 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS13350 IPR013655 PAS fold-3 DOE60_RS13350 IPR003660 HAMP domain DOE60_RS13350 IPR001610 PAC motif DOE60_RS13350 IPR035965 PAS domain superfamily DOE60_RS13350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS13355 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS13355 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS13355 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS13355 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS13355 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS13355 IPR003660 HAMP domain DOE60_RS13360 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13360 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13360 IPR005149 Transcription regulator PadR, N-terminal DOE60_RS13365 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS13365 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS13365 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS13365 IPR013113 FAD-binding 9, siderophore-interacting DOE60_RS13365 IPR039374 Siderophore-interacting protein DOE60_RS13365 IPR007037 Siderophore-interacting protein, C-terminal domain DOE60_RS13370 IPR002104 Integrase, catalytic domain DOE60_RS13370 IPR010998 Integrase/recombinase, N-terminal DOE60_RS13370 IPR004107 Integrase, SAM-like, N-terminal DOE60_RS13370 IPR011931 Tyrosine recombinase XerC DOE60_RS13370 IPR023009 Tyrosine recombinase XerC/XerD DOE60_RS13370 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS13370 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS13380 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS13380 IPR032499 Bacteriophage CI repressor, C-terminal DOE60_RS13380 IPR010744 Bacteriophage CI repressor DOE60_RS13390 IPR009679 Bacteriophage 186, CII DOE60_RS13420 IPR023095 Adenine-specific methyltransferase, domain 2 DOE60_RS13420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS13420 IPR012263 Adenine modification methylase, M.EcoRV-type DOE60_RS13420 IPR012327 D12 class N6 adenine-specific DNA methyltransferase DOE60_RS13420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS13440 IPR006430 Phage portal protein PBSX family DOE60_RS13440 IPR030935 Phage portal protein PBSX family, Proteobacteria DOE60_RS13535 IPR037053 Phage tail collar domain superfamily DOE60_RS13535 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE60_RS13535 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal DOE60_RS13535 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE60_RS13535 IPR011083 Phage tail collar domain DOE60_RS13570 IPR005122 Uracil-DNA glycosylase-like DOE60_RS13570 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial DOE60_RS13570 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOE60_RS13570 IPR015637 G/U mismatch-specific DNA glycosylase DOE60_RS13575 IPR007127 RNA polymerase sigma factor 70, region 1.1 DOE60_RS13575 IPR013325 RNA polymerase sigma factor, region 2 DOE60_RS13575 IPR042189 Sigma-70 factor, region 1.1 superfamily DOE60_RS13575 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DOE60_RS13575 IPR007631 RNA polymerase sigma factor 70, non-essential domain DOE60_RS13575 IPR007630 RNA polymerase sigma-70 region 4 DOE60_RS13575 IPR007624 RNA polymerase sigma-70 region 3 DOE60_RS13575 IPR007627 RNA polymerase sigma-70 region 2 DOE60_RS13575 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE60_RS13575 IPR000943 RNA polymerase sigma-70 DOE60_RS13575 IPR014284 RNA polymerase sigma-70 like domain DOE60_RS13575 IPR028630 RNA polymerase sigma factor RpoD DOE60_RS13575 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13575 IPR009042 RNA polymerase sigma-70 region 1.2 DOE60_RS13580 IPR030846 DNA primase DnaG, bacteria DOE60_RS13580 IPR006171 TOPRIM domain DOE60_RS13580 IPR002694 Zinc finger, CHC2-type DOE60_RS13580 IPR036977 DNA Primase, CHC2-type zinc finger DOE60_RS13580 IPR034151 Bacterial DnaG primase, TOPRIM domain DOE60_RS13580 IPR013173 DNA primase DnaG, DnaB-binding domain DOE60_RS13580 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE60_RS13580 IPR013264 DNA primase, catalytic core, N-terminal DOE60_RS13580 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DOE60_RS13580 IPR019475 DNA primase, DnaB-helicase binding domain DOE60_RS13580 IPR006295 DNA primase, DnaG DOE60_RS13585 IPR001911 Ribosomal protein S21 DOE60_RS13585 IPR018278 Ribosomal protein S21, conserved site DOE60_RS13585 IPR038380 Ribosomal protein S21 superfamily DOE60_RS13595 IPR000905 Gcp-like domain DOE60_RS13595 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD DOE60_RS13595 IPR017860 Peptidase M22, conserved site DOE60_RS13595 IPR017861 Kae1/TsaD family DOE60_RS13605 IPR001898 Solute carrier family 13 DOE60_RS13605 IPR030676 Citrate carrier CitT-related DOE60_RS13610 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE60_RS13610 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE60_RS13615 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE60_RS13620 IPR000847 Transcription regulator HTH, LysR DOE60_RS13620 IPR005119 LysR, substrate-binding DOE60_RS13620 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13620 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS13625 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY DOE60_RS13630 IPR006156 Dihydroneopterin aldolase DOE60_RS13630 IPR006157 Dihydroneopterin aldolase/epimerase domain DOE60_RS13635 IPR003824 Undecaprenyl-diphosphatase UppP DOE60_RS13640 IPR003607 HD/PDEase domain DOE60_RS13640 IPR012006 tRNA nucleotidyltransferase, proteobacteria DOE60_RS13640 IPR006674 HD domain DOE60_RS13640 IPR002646 Poly A polymerase, head domain DOE60_RS13640 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOE60_RS13645 IPR016476 SH3 domain protein DOE60_RS13645 IPR003646 SH3-like domain, bacterial-type DOE60_RS13655 IPR039013 Inorganic triphosphatase YgiF DOE60_RS13655 IPR023577 CYTH domain DOE60_RS13655 IPR007899 CHAD domain DOE60_RS13655 IPR033469 CYTH-like domain superfamily DOE60_RS13660 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme DOE60_RS13660 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DOE60_RS13660 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain DOE60_RS13665 IPR023030 Bifunctional protein HldE DOE60_RS13665 IPR004821 Cytidyltransferase-like domain DOE60_RS13665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS13665 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS13665 IPR011611 Carbohydrate kinase PfkB DOE60_RS13665 IPR011913 RfaE bifunctional protein, domain I DOE60_RS13665 IPR011914 RfaE bifunctional protein, domain II DOE60_RS13665 IPR029056 Ribokinase-like DOE60_RS13675 IPR001107 Band 7 domain DOE60_RS13675 IPR036013 Band 7/SPFH domain superfamily DOE60_RS13675 IPR031905 Flotillin, C-terminal domain DOE60_RS13675 IPR027705 Flotillin family DOE60_RS13680 IPR010840 Protein of unknown function DUF1449 DOE60_RS13685 IPR036295 GlgS superfamily DOE60_RS13685 IPR015065 Surface composition regulator DOE60_RS13690 IPR007475 Ubiquinone biosynthesis accessory factor UbiK DOE60_RS13695 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE60_RS13695 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DOE60_RS13700 IPR008966 Adhesion domain superfamily DOE60_RS13700 IPR000259 Fimbrial-type adhesion domain DOE60_RS13700 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS13705 IPR001829 Pili assembly chaperone, bacterial DOE60_RS13705 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS13705 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS13705 IPR008962 PapD-like superfamily DOE60_RS13705 IPR013783 Immunoglobulin-like fold DOE60_RS13705 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS13705 IPR018046 Pili assembly chaperone, conserved site DOE60_RS13710 IPR025949 PapC-like, C-terminal domain DOE60_RS13710 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS13710 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS13710 IPR037224 PapC, N-terminal domain superfamily DOE60_RS13710 IPR025885 PapC, N-terminal domain DOE60_RS13710 IPR000015 Outer membrane usher protein DOE60_RS13715 IPR036937 Fimbrial-type adhesion domain superfamily DOE60_RS13715 IPR008966 Adhesion domain superfamily DOE60_RS13715 IPR000259 Fimbrial-type adhesion domain DOE60_RS13720 IPR023380 DsbB-like superfamily DOE60_RS13720 IPR003752 Disulphide bond formation protein DsbB/BdbC DOE60_RS13720 IPR023792 Protein-disulfide oxidoreductase DsbI DOE60_RS13725 IPR013766 Thioredoxin domain DOE60_RS13725 IPR036249 Thioredoxin-like superfamily DOE60_RS13725 IPR028588 Thiol:disulfide interchange protein DsbL DOE60_RS13725 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DOE60_RS13725 IPR001853 DSBA-like thioredoxin domain DOE60_RS13730 IPR010262 Arylsulfotransferase, bacteria DOE60_RS13730 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria DOE60_RS13730 IPR038477 Arylsulfotransferase, N-terminal domain superfamily DOE60_RS13730 IPR035391 Arylsulfotransferase, Ig-like domain DOE60_RS13740 IPR023498 Zinc transporter ZupT DOE60_RS13740 IPR003689 Zinc/iron permease DOE60_RS13745 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOE60_RS13745 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type DOE60_RS13750 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS13750 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE60_RS13755 IPR009576 Biofilm formation YgiB DOE60_RS13765 IPR010130 Type I secretion outer membrane protein, TolC DOE60_RS13765 IPR003423 Outer membrane efflux protein DOE60_RS13770 IPR020084 NUDIX hydrolase, conserved site DOE60_RS13770 IPR000086 NUDIX hydrolase domain DOE60_RS13770 IPR004385 Nucleoside diphosphate pyrophosphatase DOE60_RS13770 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS13775 IPR009659 Protein of unknown function DUF1249 DOE60_RS13780 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS13780 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA DOE60_RS13780 IPR029052 Metallo-dependent phosphatase-like DOE60_RS13785 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DOE60_RS13785 IPR029058 Alpha/Beta hydrolase fold DOE60_RS13790 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE60_RS13790 IPR001241 DNA topoisomerase, type IIA DOE60_RS13790 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS13790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS13790 IPR006171 TOPRIM domain DOE60_RS13790 IPR018522 DNA topoisomerase, type IIA, conserved site DOE60_RS13790 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS13790 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOE60_RS13790 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOE60_RS13790 IPR002288 DNA gyrase B subunit, C-terminal DOE60_RS13790 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS13790 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DOE60_RS13795 IPR011008 Dimeric alpha-beta barrel DOE60_RS13795 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE60_RS13800 IPR029039 Flavoprotein-like superfamily DOE60_RS13800 IPR003680 Flavodoxin-like fold DOE60_RS13805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS13805 IPR013727 Two-component sensor kinase, N-terminal DOE60_RS13805 IPR003660 HAMP domain DOE60_RS13805 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS13805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS13805 IPR005467 Histidine kinase domain DOE60_RS13805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS13805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS13810 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS13810 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS13810 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS13810 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS13810 IPR011006 CheY-like superfamily DOE60_RS13810 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS13815 IPR016052 Bacteriophage 933W, L0136 DOE60_RS13815 IPR005220 Bacterial OB-fold DOE60_RS13815 IPR036700 Bacterial OB-fold superfamily DOE60_RS13820 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOE60_RS13820 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOE60_RS13820 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE60_RS13820 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE60_RS13820 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOE60_RS13820 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DOE60_RS13820 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOE60_RS13825 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase DOE60_RS13825 IPR002123 Phospholipid/glycerol acyltransferase DOE60_RS13830 IPR011707 Multicopper oxidase, type 3 DOE60_RS13830 IPR011706 Multicopper oxidase, type 2 DOE60_RS13830 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS13830 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS13830 IPR008972 Cupredoxin DOE60_RS13830 IPR026589 Cell division protein FtsP DOE60_RS13830 IPR001117 Multicopper oxidase, type 1 DOE60_RS13835 IPR020612 Methylthiotransferase, conserved site DOE60_RS13835 IPR007197 Radical SAM DOE60_RS13835 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS13835 IPR022946 Uncharacterised protein family UPF0313 DOE60_RS13835 IPR024560 Uncharacterised protein family UPF0313, C-terminal DOE60_RS13835 IPR013704 Uncharacterised protein family UPF0313, N-terminal DOE60_RS13835 IPR006638 Elp3/MiaB/NifB DOE60_RS13845 IPR030676 Citrate carrier CitT-related DOE60_RS13845 IPR001898 Solute carrier family 13 DOE60_RS13850 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS13850 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS13850 IPR020471 Aldo/keto reductase DOE60_RS13850 IPR018170 Aldo/keto reductase, conserved site DOE60_RS13855 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS13855 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS13860 IPR009594 Transcription regulator HTH, AraC, N-terminal DOE60_RS13860 IPR009057 Homeobox-like domain superfamily DOE60_RS13860 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS13865 IPR032816 SNARE associated Golgi protein DOE60_RS13865 IPR032818 DedA family DOE60_RS13870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS13870 IPR006233 Cystathionine beta-lyase, bacterial DOE60_RS13870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS13870 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOE60_RS13870 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS13880 IPR014164 TonB-system energizer ExbB type-1 DOE60_RS13880 IPR002898 MotA/TolQ/ExbB proton channel DOE60_RS13885 IPR014170 TonB system transport protein ExbD type-1 DOE60_RS13885 IPR003400 Biopolymer transport protein ExbD/TolR DOE60_RS13890 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS13890 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS13890 IPR036291 NAD(P)-binding domain superfamily DOE60_RS13910 IPR020761 Uncharacterised protein family UPF0114, bacteria DOE60_RS13910 IPR005134 Uncharacterised protein family UPF0114 DOE60_RS13915 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS13915 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS13915 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS13915 IPR003660 HAMP domain DOE60_RS13915 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS13915 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS13920 IPR022574 Protein of unknown function DUF2623 DOE60_RS13930 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS13930 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE60_RS13930 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS13930 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE60_RS13930 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE60_RS13930 IPR001821 [NiFe]-hydrogenase, small subunit DOE60_RS13930 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE60_RS13935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS13935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS13935 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS13940 IPR005614 NrfD family DOE60_RS13945 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE60_RS13945 IPR001501 Nickel-dependent hydrogenase, large subunit DOE60_RS13945 IPR029014 [NiFe]-hydrogenase, large subunit DOE60_RS13950 IPR023430 Peptidase HybD-like domain superfamily DOE60_RS13950 IPR000671 Peptidase A31 family DOE60_RS13950 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE60_RS13955 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DOE60_RS13955 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily DOE60_RS13960 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE60_RS13960 IPR039002 Hydrogenase maturation factor HybF DOE60_RS13960 IPR000688 Hydrogenase maturation factor HypA/HybF DOE60_RS13965 IPR037254 HupF/HypC superfamily DOE60_RS13965 IPR019812 Hydrogenase assembly chaperone, conserved site DOE60_RS13965 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE60_RS13970 IPR002491 ABC transporter periplasmic binding domain DOE60_RS13980 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS13980 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS13980 IPR040079 Glutathione Transferase family DOE60_RS13980 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS13980 IPR036249 Thioredoxin-like superfamily DOE60_RS13985 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS13985 IPR007921 CHAP domain DOE60_RS13985 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE60_RS13985 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS13995 IPR032466 Metal-dependent hydrolase DOE60_RS13995 IPR003766 Uronate isomerase DOE60_RS14000 IPR013118 Mannitol dehydrogenase, C-terminal DOE60_RS14000 IPR023027 Mannitol dehydrogenase, conserved site DOE60_RS14000 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14000 IPR013131 Mannitol dehydrogenase, N-terminal DOE60_RS14000 IPR000669 Mannitol dehydrogenase DOE60_RS14000 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS14000 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS14005 IPR004628 Mannonate dehydratase DOE60_RS14005 IPR036237 Xylose isomerase-like superfamily DOE60_RS14015 IPR011701 Major facilitator superfamily DOE60_RS14015 IPR020846 Major facilitator superfamily domain DOE60_RS14015 IPR036259 MFS transporter superfamily DOE60_RS14025 IPR037950 Peptidoglycan deacetylase PgdA-like DOE60_RS14025 IPR002509 NodB homology domain DOE60_RS14025 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS14035 IPR007048 IraD/Gp25-like DOE60_RS14035 IPR023776 Anti-adapter protein, IraD DOE60_RS14040 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS14040 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS14040 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS14040 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS14040 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS14040 IPR015590 Aldehyde dehydrogenase domain DOE60_RS14045 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS14045 IPR006076 FAD dependent oxidoreductase DOE60_RS14055 IPR002293 Amino acid/polyamine transporter I DOE60_RS14055 IPR004758 Amino acid transporter DOE60_RS14065 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS14065 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS14065 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14070 IPR023885 4Fe4S-binding SPASM domain DOE60_RS14070 IPR007197 Radical SAM DOE60_RS14070 IPR013785 Aldolase-type TIM barrel DOE60_RS14070 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE60_RS14075 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS14075 IPR024607 Sulfatase, conserved site DOE60_RS14075 IPR000917 Sulfatase, N-terminal DOE60_RS14105 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS14105 IPR005714 ATPase, type III secretion system, FliI/YscN DOE60_RS14105 IPR013380 ATPase, type III secretion system, H+-transporting DOE60_RS14105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14105 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE60_RS14105 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE60_RS14105 IPR003593 AAA+ ATPase domain DOE60_RS14105 IPR040627 T3SS EscN ATPase, C-terminal DOE60_RS14110 IPR006302 Type III secretion protein HrcV DOE60_RS14110 IPR025505 FHIPEP conserved site DOE60_RS14110 IPR042196 FHIPEP, domain 4 DOE60_RS14110 IPR001712 Type III secretion system FHIPEP DOE60_RS14110 IPR042193 FHIPEP, domain 3 DOE60_RS14130 IPR006182 Secretory protein YscJ/FliF DOE60_RS14130 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOE60_RS14140 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOE60_RS14140 IPR005644 NolW-like DOE60_RS14140 IPR004845 Type II secretion system GspD, conserved site DOE60_RS14140 IPR004846 Type II/III secretion system DOE60_RS14140 IPR038591 NolW-like superfamily DOE60_RS14160 IPR023346 Lysozyme-like domain superfamily DOE60_RS14160 IPR008258 Transglycosylase SLT domain 1 DOE60_RS14165 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOE60_RS14165 IPR029025 Type III secretion system substrate exporter, C-terminal DOE60_RS14165 IPR006135 Type III secretion system substrate exporter DOE60_RS14170 IPR006304 Type III secretion protein SpaR/YscT DOE60_RS14170 IPR002010 Type III secretion system inner membrane R protein DOE60_RS14175 IPR002191 Bacterial export protein family 3 DOE60_RS14175 IPR006306 Type III secretion protein HrpO DOE60_RS14180 IPR005838 Type III secretion system inner membrane P protein DOE60_RS14180 IPR005773 Yop virulence translocation protein R DOE60_RS14205 IPR027444 Histone-like protein H-NS, C-terminal domain DOE60_RS14205 IPR027454 Histone-like protein H-NS, N-terminal DOE60_RS14205 IPR001801 Histone-like protein H-NS DOE60_RS14205 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOE60_RS14210 IPR022639 Translocated intimin receptor, C-terminal DOE60_RS14210 IPR022638 Translocated intimin receptor DOE60_RS14210 IPR022633 Translocated intimin receptor, N-terminal DOE60_RS14210 IPR037003 Translocated intimin receptor, central domain superfamily DOE60_RS14210 IPR003536 Translocated intimin receptor, central domain DOE60_RS14215 IPR010261 Tir chaperone protein (CesT) family DOE60_RS14220 IPR018392 LysM domain DOE60_RS14220 IPR013783 Immunoglobulin-like fold DOE60_RS14220 IPR003344 Big-1 (bacterial Ig-like domain 1) domain DOE60_RS14220 IPR003343 Bacterial Ig-like, group 2 DOE60_RS14220 IPR016186 C-type lectin-like/link domain superfamily DOE60_RS14220 IPR038177 Inverse autotransporter, beta-domain superfamily DOE60_RS14220 IPR003535 Intimin/invasin bacterial adhesion mediator protein DOE60_RS14220 IPR013117 Intimin, C-terminal DOE60_RS14220 IPR016187 C-type lectin fold DOE60_RS14220 IPR024519 Inverse autotransporter, beta-domain DOE60_RS14220 IPR008964 Invasin/intimin cell-adhesion fragments DOE60_RS14230 IPR013351 Type III secretion system effector delivery regulator TyeA-related DOE60_RS14230 IPR010812 Hypersensitivity response secretion-like, HrpJ DOE60_RS14245 IPR008611 Protein EaeB DOE60_RS14325 IPR006531 Gp5 N-terminal DOE60_RS14325 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DOE60_RS14325 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DOE60_RS14325 IPR037026 Vgr protein, OB-fold domain superfamily DOE60_RS14345 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DOE60_RS14345 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS14365 IPR010998 Integrase/recombinase, N-terminal DOE60_RS14365 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS14365 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS14365 IPR002104 Integrase, catalytic domain DOE60_RS14365 IPR038488 Integrase, DNA-binding domain superfamily DOE60_RS14365 IPR025166 Integrase, DNA-binding domain DOE60_RS14375 IPR007563 Protein of unknown function DUF554 DOE60_RS14385 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE60_RS14385 IPR011006 CheY-like superfamily DOE60_RS14385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS14385 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE60_RS14385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS14385 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE60_RS14385 IPR027464 Ornithine decarboxylase, N-terminal DOE60_RS14385 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS14385 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE60_RS14385 IPR011193 Ornithine/lysine/arginine decarboxylase DOE60_RS14390 IPR020846 Major facilitator superfamily domain DOE60_RS14390 IPR004740 Nucleoside:H+ symporter DOE60_RS14390 IPR036259 MFS transporter superfamily DOE60_RS14390 IPR033667 Nucleoside permease NupG DOE60_RS14395 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS14395 IPR023346 Lysozyme-like domain superfamily DOE60_RS14395 IPR023664 Murein transglycosylase-C DOE60_RS14395 IPR024570 Murein transglycosylase-C, N-terminal DOE60_RS14395 IPR008258 Transglycosylase SLT domain 1 DOE60_RS14400 IPR036766 Fe(II) trafficking protein YggX superfamily DOE60_RS14400 IPR007457 Fe(II) trafficking protein YggX DOE60_RS14405 IPR004036 Endonuclease III-like, conserved site-2 DOE60_RS14405 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOE60_RS14405 IPR004035 Endonuclease III, iron-sulphur binding site DOE60_RS14405 IPR000445 Helix-hairpin-helix motif DOE60_RS14405 IPR011257 DNA glycosylase DOE60_RS14405 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE60_RS14405 IPR029119 MutY, C-terminal DOE60_RS14405 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS14405 IPR003265 HhH-GPD domain DOE60_RS14405 IPR005760 A/G-specific adenine glycosylase MutY DOE60_RS14415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS14415 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type DOE60_RS14420 IPR007416 Protein of unknown function DUF469 DOE60_RS14425 IPR021307 Protein of unknown function DUF2884 DOE60_RS14430 IPR004550 L-asparaginase, type II DOE60_RS14430 IPR027473 L-asparaginase, C-terminal DOE60_RS14430 IPR027475 Asparaginase/glutaminase, active site 2 DOE60_RS14430 IPR020827 Asparaginase/glutaminase, active site 1 DOE60_RS14430 IPR006034 Asparaginase/glutaminase-like DOE60_RS14430 IPR037152 L-asparaginase, N-terminal domain superfamily DOE60_RS14430 IPR027474 L-asparaginase, N-terminal DOE60_RS14430 IPR040919 Asparaginase/glutaminase, C-terminal DOE60_RS14430 IPR036152 Asparaginase/glutaminase-like superfamily DOE60_RS14435 IPR009592 Protein of unknown function DUF1202 DOE60_RS14440 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOE60_RS14440 IPR010723 HemN, C-terminal DOE60_RS14440 IPR004559 Heme chaperone HemW-like DOE60_RS14440 IPR007197 Radical SAM DOE60_RS14440 IPR023404 Radical SAM, alpha/beta horseshoe DOE60_RS14440 IPR006638 Elp3/MiaB/NifB DOE60_RS14445 IPR029001 Inosine triphosphate pyrophosphatase-like DOE60_RS14445 IPR002637 Ham1-like protein DOE60_RS14445 IPR020922 dITP/XTP pyrophosphatase DOE60_RS14450 IPR003746 Protein of unknown function DUF167 DOE60_RS14450 IPR005228 Conserved hypothetical protein CHP00251 DOE60_RS14450 IPR036591 YggU-like superfamily DOE60_RS14455 IPR003425 CCB3/YggT DOE60_RS14460 IPR001608 Alanine racemase, N-terminal DOE60_RS14460 IPR029066 PLP-binding barrel DOE60_RS14460 IPR011078 Pyridoxal phosphate homeostasis protein DOE60_RS14465 IPR001482 Type II/IV secretion system protein DOE60_RS14465 IPR006321 Pilus retraction protein PilT DOE60_RS14465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14465 IPR003593 AAA+ ATPase domain DOE60_RS14475 IPR037027 YqgF/RNase H-like domain superfamily DOE60_RS14475 IPR006641 YqgF/RNase H-like domain DOE60_RS14475 IPR012337 Ribonuclease H-like superfamily DOE60_RS14475 IPR005227 Putative pre-16S rRNA nuclease DOE60_RS14480 IPR003774 Protein of unknown function UPF0301 DOE60_RS14485 IPR006284 Glutathione synthetase, prokaryotic DOE60_RS14485 IPR004218 Prokaryotic glutathione synthetase, ATP-binding DOE60_RS14485 IPR011761 ATP-grasp fold DOE60_RS14485 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS14485 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS14485 IPR004215 Prokaryotic glutathione synthetase, N-terminal DOE60_RS14490 IPR029028 Alpha/beta knot methyltransferases DOE60_RS14490 IPR006700 Ribosomal RNA small subunit methyltransferase E DOE60_RS14490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS14490 IPR015947 PUA-like superfamily DOE60_RS14495 IPR007346 Endonuclease I DOE60_RS14500 IPR035240 SprT-like, zinc ribbon domain DOE60_RS14500 IPR006640 SprT-like DOE60_RS14500 IPR023483 Uncharacterised protein family SprT DOE60_RS14505 IPR005828 Major facilitator, sugar transporter-like DOE60_RS14505 IPR036259 MFS transporter superfamily DOE60_RS14505 IPR003663 Sugar/inositol transporter DOE60_RS14505 IPR005829 Sugar transporter, conserved site DOE60_RS14505 IPR020846 Major facilitator superfamily domain DOE60_RS14510 IPR022636 S-adenosylmethionine synthetase superfamily DOE60_RS14510 IPR022630 S-adenosylmethionine synthetase, C-terminal DOE60_RS14510 IPR022629 S-adenosylmethionine synthetase, central domain DOE60_RS14510 IPR022628 S-adenosylmethionine synthetase, N-terminal DOE60_RS14510 IPR002133 S-adenosylmethionine synthetase DOE60_RS14510 IPR022631 S-adenosylmethionine synthetase, conserved site DOE60_RS14520 IPR020102 Uncharacterised protein YqgC-like DOE60_RS14525 IPR020196 Uncharacterised protein family YqgB DOE60_RS14530 IPR029066 PLP-binding barrel DOE60_RS14530 IPR000183 Ornithine/DAP/Arg decarboxylase DOE60_RS14530 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE60_RS14530 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOE60_RS14530 IPR002985 Arginine decarboxylase DOE60_RS14530 IPR040634 Arginine decarboxylase, helical bundle domain DOE60_RS14530 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE60_RS14530 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DOE60_RS14530 IPR041128 Arginine decarboxylase, C-terminal helical DOE60_RS14540 IPR000524 Transcription regulator HTH, GntR DOE60_RS14540 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS14540 IPR011711 GntR, C-terminal DOE60_RS14540 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS14540 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14545 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase DOE60_RS14545 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS14545 IPR029017 Enolase-like, N-terminal DOE60_RS14545 IPR029065 Enolase C-terminal domain-like DOE60_RS14545 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE60_RS14545 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS14550 IPR013118 Mannitol dehydrogenase, C-terminal DOE60_RS14550 IPR013131 Mannitol dehydrogenase, N-terminal DOE60_RS14550 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14550 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS14550 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS14550 IPR000669 Mannitol dehydrogenase DOE60_RS14550 IPR023027 Mannitol dehydrogenase, conserved site DOE60_RS14555 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS14555 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS14555 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS14555 IPR011032 GroES-like superfamily DOE60_RS14555 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS14555 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14560 IPR003767 Malate/L-lactate dehydrogenase-like DOE60_RS14560 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily DOE60_RS14565 IPR004375 YhcH/YjgK/YiaL family DOE60_RS14565 IPR037012 YhcH/YjgK/YiaL superfamily DOE60_RS14570 IPR000849 Sugar phosphate transporter DOE60_RS14570 IPR020846 Major facilitator superfamily domain DOE60_RS14570 IPR011701 Major facilitator superfamily DOE60_RS14570 IPR036259 MFS transporter superfamily DOE60_RS14575 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS14575 IPR029058 Alpha/Beta hydrolase fold DOE60_RS14580 IPR005925 Agmatinase-related DOE60_RS14580 IPR023694 Agmatinase DOE60_RS14580 IPR023696 Ureohydrolase domain superfamily DOE60_RS14580 IPR020855 Ureohydrolase, manganese-binding site DOE60_RS14580 IPR006035 Ureohydrolase DOE60_RS14585 IPR001915 Peptidase M48 DOE60_RS14590 IPR020826 Transketolase binding site DOE60_RS14590 IPR005478 Transketolase, bacterial-like DOE60_RS14590 IPR029061 Thiamin diphosphate-binding fold DOE60_RS14590 IPR033247 Transketolase family DOE60_RS14590 IPR033248 Transketolase, C-terminal domain DOE60_RS14590 IPR005474 Transketolase, N-terminal DOE60_RS14590 IPR005475 Transketolase-like, pyrimidine-binding domain DOE60_RS14590 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS14595 IPR002178 PTS EIIA type-2 domain DOE60_RS14595 IPR016152 Phosphotransferase/anion transporter DOE60_RS14600 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS14600 IPR029503 Phosphotransferase system EIIB component, mannitol-specific DOE60_RS14600 IPR036095 PTS system IIB component-like superfamily DOE60_RS14600 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS14600 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS14600 IPR003352 Phosphotransferase system, EIIC DOE60_RS14600 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC DOE60_RS14605 IPR011032 GroES-like superfamily DOE60_RS14605 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14605 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS14605 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS14610 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase DOE60_RS14620 IPR038026 MtlR-like superfamily DOE60_RS14620 IPR007761 Mannitol repressor MtlR-like DOE60_RS14625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14630 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14630 IPR017871 ABC transporter, conserved site DOE60_RS14630 IPR003439 ABC transporter-like DOE60_RS14630 IPR003593 AAA+ ATPase domain DOE60_RS14635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14635 IPR003593 AAA+ ATPase domain DOE60_RS14635 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 DOE60_RS14635 IPR015856 ABC transporter, CbiO/EcfA subunit DOE60_RS14635 IPR017871 ABC transporter, conserved site DOE60_RS14635 IPR003439 ABC transporter-like DOE60_RS14660 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DOE60_RS14660 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14660 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DOE60_RS14660 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DOE60_RS14660 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DOE60_RS14660 IPR006422 D-erythrose-4-phosphate dehydrogenase DOE60_RS14660 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DOE60_RS14665 IPR015824 Phosphoglycerate kinase, N-terminal DOE60_RS14665 IPR001576 Phosphoglycerate kinase DOE60_RS14665 IPR036043 Phosphoglycerate kinase superfamily DOE60_RS14665 IPR015911 Phosphoglycerate kinase, conserved site DOE60_RS14670 IPR013785 Aldolase-type TIM barrel DOE60_RS14670 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype DOE60_RS14670 IPR000771 Fructose-bisphosphate aldolase, class-II DOE60_RS14675 IPR006685 Mechanosensitive ion channel MscS DOE60_RS14675 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS14675 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE60_RS14675 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS14675 IPR008910 Conserved TM helix DOE60_RS14675 IPR010920 LSM domain superfamily DOE60_RS14675 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS14680 IPR023445 Arginine exporter protein ArgO, enterobacteria DOE60_RS14680 IPR001123 Amino acid exporter protein, LeuE-type DOE60_RS14680 IPR004777 L-lysine exporter/arginine exporter DOE60_RS14685 IPR007497 Protein of unknown function DUF541 DOE60_RS14690 IPR000847 Transcription regulator HTH, LysR DOE60_RS14690 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS14690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14690 IPR005119 LysR, substrate-binding DOE60_RS14695 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain DOE60_RS14695 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily DOE60_RS14695 IPR003702 Acetyl-CoA hydrolase/transferase DOE60_RS14695 IPR037171 NagB/RpiA transferase-like DOE60_RS14695 IPR017821 Succinate CoA transferase DOE60_RS14700 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS14700 IPR014748 Enoyl-CoA hydratase, C-terminal DOE60_RS14700 IPR001753 Enoyl-CoA hydratase/isomerase DOE60_RS14700 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE60_RS14705 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB DOE60_RS14705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS14710 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic DOE60_RS14710 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic DOE60_RS14710 IPR006159 Methylmalonyl-CoA mutase, C-terminal DOE60_RS14710 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic DOE60_RS14710 IPR006158 Cobalamin (vitamin B12)-binding domain DOE60_RS14710 IPR036724 Cobalamin-binding domain superfamily DOE60_RS14720 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria DOE60_RS14720 IPR017685 HTH-type transcriptional regulator ArgP DOE60_RS14720 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14720 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS14720 IPR005119 LysR, substrate-binding DOE60_RS14720 IPR000847 Transcription regulator HTH, LysR DOE60_RS14725 IPR004788 Ribose 5-phosphate isomerase, type A DOE60_RS14725 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup DOE60_RS14725 IPR037171 NagB/RpiA transferase-like DOE60_RS14730 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE60_RS14730 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE60_RS14730 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE60_RS14730 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE60_RS14730 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14730 IPR002912 ACT domain DOE60_RS14735 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE60_RS14735 IPR037171 NagB/RpiA transferase-like DOE60_RS14735 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE60_RS14745 IPR036192 Cell division protein ZapA-like superfamily DOE60_RS14745 IPR023771 Cell division protein ZapA, eubacteria DOE60_RS14745 IPR007838 Cell division protein ZapA-like DOE60_RS14755 IPR011978 Uncharacterised protein family UPF0149 DOE60_RS14755 IPR036255 YgfB-like superfamily DOE60_RS14760 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE60_RS14760 IPR036005 Creatinase/aminopeptidase-like DOE60_RS14760 IPR000994 Peptidase M24 DOE60_RS14760 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE60_RS14760 IPR001714 Peptidase M24, methionine aminopeptidase DOE60_RS14760 IPR007865 Aminopeptidase P, N-terminal DOE60_RS14765 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE60_RS14765 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS14765 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE60_RS14765 IPR002938 FAD-binding domain DOE60_RS14765 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase DOE60_RS14770 IPR002938 FAD-binding domain DOE60_RS14770 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE60_RS14770 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE60_RS14770 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS14775 IPR006223 Glycine cleavage system T protein DOE60_RS14775 IPR022903 Glycine cleavage system T protein, bacteria DOE60_RS14775 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DOE60_RS14775 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOE60_RS14775 IPR028896 Aminomethyltransferase-like DOE60_RS14775 IPR006222 Aminomethyltransferase, folate-binding domain DOE60_RS14775 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOE60_RS14780 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE60_RS14780 IPR000089 Biotin/lipoyl attachment DOE60_RS14780 IPR002930 Glycine cleavage system H-protein DOE60_RS14780 IPR017453 Glycine cleavage system H-protein, subgroup DOE60_RS14780 IPR033753 Glycine cleavage system H-protein/Simiate DOE60_RS14780 IPR011053 Single hybrid motif DOE60_RS14785 IPR020581 Glycine cleavage system P protein DOE60_RS14785 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS14785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS14785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS14785 IPR003437 Glycine dehydrogenase (decarboxylating) DOE60_RS14790 IPR018120 Glycoside hydrolase family 1, active site DOE60_RS14790 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE60_RS14790 IPR001360 Glycoside hydrolase family 1 DOE60_RS14790 IPR017853 Glycoside hydrolase superfamily DOE60_RS14795 IPR008314 Uncharacterised conserved protein UCP029143 DOE60_RS14795 IPR007374 ASCH domain DOE60_RS14795 IPR015947 PUA-like superfamily DOE60_RS14800 IPR005744 Hly-III DOE60_RS14800 IPR004254 AdipoR/Haemolysin-III-related DOE60_RS14805 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOE60_RS14805 IPR017703 YgfZ/GcvT conserved site DOE60_RS14805 IPR006222 Aminomethyltransferase, folate-binding domain DOE60_RS14805 IPR023758 tRNA-modifying protein YgfZ DOE60_RS14815 IPR005631 Flavinator of succinate dehydrogenase DOE60_RS14815 IPR036714 Flavinator of succinate dehydrogenase superfamily DOE60_RS14820 IPR009883 Inner membrane protein YgfX DOE60_RS14825 IPR001226 Flavodoxin, conserved site DOE60_RS14825 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS14825 IPR029039 Flavoprotein-like superfamily DOE60_RS14825 IPR010086 Flavodoxin, long chain DOE60_RS14830 IPR023009 Tyrosine recombinase XerC/XerD DOE60_RS14830 IPR011932 Tyrosine recombinase XerD DOE60_RS14830 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS14830 IPR004107 Integrase, SAM-like, N-terminal DOE60_RS14830 IPR010998 Integrase/recombinase, N-terminal DOE60_RS14830 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS14830 IPR002104 Integrase, catalytic domain DOE60_RS14835 IPR033954 Disulphide bond isomerase, DsbC/G DOE60_RS14835 IPR036249 Thioredoxin-like superfamily DOE60_RS14835 IPR012336 Thioredoxin-like fold DOE60_RS14835 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DOE60_RS14835 IPR017937 Thioredoxin, conserved site DOE60_RS14835 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DOE60_RS14840 IPR041122 RecJ, OB domain DOE60_RS14840 IPR003156 DHHA1 domain DOE60_RS14840 IPR004610 Bacterial RecJ exonuclease DOE60_RS14840 IPR038763 DHH phosphoesterase superfamily DOE60_RS14840 IPR001667 DDH domain DOE60_RS14850 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE60_RS14850 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II DOE60_RS14850 IPR002313 Lysine-tRNA ligase, class II DOE60_RS14850 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOE60_RS14850 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS14850 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE60_RS14850 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS14855 IPR000086 NUDIX hydrolase domain DOE60_RS14855 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS14855 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 DOE60_RS14860 IPR018392 LysM domain DOE60_RS14860 IPR011055 Duplicated hybrid motif DOE60_RS14860 IPR036779 LysM domain superfamily DOE60_RS14860 IPR016047 Peptidase M23 DOE60_RS14870 IPR011541 Nickel/cobalt transporter, high-affinity DOE60_RS14875 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE60_RS14875 IPR003735 Metal-sensitive transcriptional repressor DOE60_RS14880 IPR018227 Amino acid/polyamine transporter 2 DOE60_RS14890 IPR000847 Transcription regulator HTH, LysR DOE60_RS14890 IPR005119 LysR, substrate-binding DOE60_RS14890 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS14890 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14895 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE60_RS14895 IPR020610 Thiolase, active site DOE60_RS14895 IPR020613 Thiolase, conserved site DOE60_RS14895 IPR020616 Thiolase, N-terminal DOE60_RS14895 IPR002155 Thiolase DOE60_RS14895 IPR020617 Thiolase, C-terminal DOE60_RS14895 IPR016039 Thiolase-like DOE60_RS14905 IPR007045 5-keto 4-deoxyuronate isomerase DOE60_RS14905 IPR014710 RmlC-like jelly roll fold DOE60_RS14905 IPR011051 RmlC-like cupin domain superfamily DOE60_RS14905 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal DOE60_RS14905 IPR021120 KduI/IolB isomerase DOE60_RS14910 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DOE60_RS14910 IPR036291 NAD(P)-binding domain superfamily DOE60_RS14910 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS14910 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS14915 IPR036259 MFS transporter superfamily DOE60_RS14915 IPR020846 Major facilitator superfamily domain DOE60_RS14915 IPR005828 Major facilitator, sugar transporter-like DOE60_RS14915 IPR005829 Sugar transporter, conserved site DOE60_RS14915 IPR003663 Sugar/inositol transporter DOE60_RS14920 IPR015942 Asp/Glu/hydantoin racemase DOE60_RS14920 IPR001920 Asp/Glu racemase DOE60_RS14920 IPR018187 Asp/Glu racemase, active site 1 DOE60_RS14920 IPR033134 Asp/Glu racemase, active site 2 DOE60_RS14920 IPR004380 Aspartate racemase DOE60_RS14925 IPR037414 Transcriptional activator protein LysR, PBP2 domain DOE60_RS14925 IPR005119 LysR, substrate-binding DOE60_RS14925 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS14925 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS14925 IPR000847 Transcription regulator HTH, LysR DOE60_RS14930 IPR029066 PLP-binding barrel DOE60_RS14930 IPR000183 Ornithine/DAP/Arg decarboxylase DOE60_RS14930 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DOE60_RS14930 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE60_RS14930 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOE60_RS14930 IPR002986 Diaminopimelate decarboxylase, LysA DOE60_RS14930 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DOE60_RS14930 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE60_RS14935 IPR000843 LacI-type HTH domain DOE60_RS14935 IPR028082 Periplasmic binding protein-like I DOE60_RS14935 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS14940 IPR028082 Periplasmic binding protein-like I DOE60_RS14940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS14940 IPR000843 LacI-type HTH domain DOE60_RS14955 IPR000873 AMP-dependent synthetase/ligase DOE60_RS14955 IPR020845 AMP-binding, conserved site DOE60_RS14955 IPR023775 Bifunctional protein Aas DOE60_RS14955 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS14955 IPR002123 Phospholipid/glycerol acyltransferase DOE60_RS14960 IPR011701 Major facilitator superfamily DOE60_RS14960 IPR023727 Lysophospholipid transporter LplT DOE60_RS14960 IPR036259 MFS transporter superfamily DOE60_RS14965 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS14965 IPR020471 Aldo/keto reductase DOE60_RS14965 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS14970 IPR010305 Protein of unknown function DUF903 DOE60_RS14970 IPR010920 LSM domain superfamily DOE60_RS14975 IPR005496 Integral membrane protein TerC DOE60_RS14980 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II DOE60_RS14980 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily DOE60_RS14980 IPR011335 Restriction endonuclease type II-like DOE60_RS14980 IPR004230 DNA mismatch repair protein MutH DOE60_RS14985 IPR022927 RNA pyrophosphohydrolase RppH DOE60_RS14985 IPR020476 NUDIX hydrolase DOE60_RS14985 IPR000086 NUDIX hydrolase domain DOE60_RS14985 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS14985 IPR020084 NUDIX hydrolase, conserved site DOE60_RS14990 IPR000121 PEP-utilising enzyme, C-terminal DOE60_RS14990 IPR003018 GAF domain DOE60_RS14990 IPR029016 GAF-like domain superfamily DOE60_RS14990 IPR008279 PEP-utilising enzyme, mobile domain DOE60_RS14990 IPR018274 PEP-utilising enzyme, active site DOE60_RS14990 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS14990 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS14990 IPR036618 PtsI, HPr-binding domain superfamily DOE60_RS14990 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE60_RS14990 IPR006318 Phosphotransferase system, enzyme I-like DOE60_RS14990 IPR036637 Phosphohistidine domain superfamily DOE60_RS14990 IPR023151 PEP-utilising enzyme, conserved site DOE60_RS15000 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DOE60_RS15005 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DOE60_RS15005 IPR020940 Thymidylate synthase, active site DOE60_RS15005 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DOE60_RS15005 IPR000398 Thymidylate synthase DOE60_RS15015 IPR012902 Prokaryotic N-terminal methylation site DOE60_RS15020 IPR012902 Prokaryotic N-terminal methylation site DOE60_RS15020 IPR016419 Prepilin peptidase-dependent protein B, predicted DOE60_RS15025 IPR019652 Protein of unknown function DUF2509 DOE60_RS15030 IPR012902 Prokaryotic N-terminal methylation site DOE60_RS15030 IPR022204 Prepilin peptidase dependent protein C DOE60_RS15035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15035 IPR011335 Restriction endonuclease type II-like DOE60_RS15035 IPR041500 RecC, C-terminal DOE60_RS15035 IPR006697 RecBCD enzyme subunit RecC DOE60_RS15035 IPR013986 DExx box DNA helicase domain superfamily DOE60_RS15040 IPR032632 Peptidase M16, middle/third domain DOE60_RS15040 IPR007863 Peptidase M16, C-terminal DOE60_RS15040 IPR001431 Peptidase M16, zinc-binding site DOE60_RS15040 IPR011765 Peptidase M16, N-terminal DOE60_RS15040 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE60_RS15045 IPR014017 UvrD-like DNA helicase, C-terminal DOE60_RS15045 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15045 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE60_RS15045 IPR004586 RecBCD enzyme subunit RecB DOE60_RS15045 IPR034739 UvrD/AddA helicase, N-terminal DOE60_RS15045 IPR000212 DNA helicase, UvrD/REP type DOE60_RS15045 IPR011335 Restriction endonuclease type II-like DOE60_RS15045 IPR014016 UvrD-like helicase, ATP-binding domain DOE60_RS15045 IPR011604 Exonuclease, phage-type/RecB, C-terminal DOE60_RS15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15050 IPR006344 RecBCD enzyme subunit RecD DOE60_RS15050 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain DOE60_RS15050 IPR003593 AAA+ ATPase domain DOE60_RS15050 IPR027785 UvrD-like helicase C-terminal domain DOE60_RS15055 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS15055 IPR036393 Acetylglutamate kinase-like superfamily DOE60_RS15055 IPR000182 GNAT domain DOE60_RS15055 IPR010167 Amino-acid N-acetyltransferase DOE60_RS15055 IPR001048 Aspartate/glutamate/uridylate kinase DOE60_RS15055 IPR033719 N-acetylglutamate synthase, kinase-like domain DOE60_RS15060 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS15060 IPR021731 AMIN domain DOE60_RS15060 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE60_RS15075 IPR010611 3D domain DOE60_RS15075 IPR036908 RlpA-like domain superfamily DOE60_RS15075 IPR005300 Lytic transglycosylase MltA, domain B DOE60_RS15075 IPR026044 Membrane-bound lytic murein transglycosylase A DOE60_RS15075 IPR034654 MltA, 3D domain DOE60_RS15080 IPR000594 THIF-type NAD/FAD binding fold DOE60_RS15080 IPR035985 Ubiquitin-activating enzyme DOE60_RS15085 IPR000620 EamA domain DOE60_RS15085 IPR004626 RarD protein DOE60_RS15090 IPR003808 Fe-S metabolism associated domain, SufE-like DOE60_RS15090 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE DOE60_RS15095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS15095 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS15095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS15095 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA DOE60_RS15095 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE60_RS15095 IPR000192 Aminotransferase class V domain DOE60_RS15100 IPR010305 Protein of unknown function DUF903 DOE60_RS15100 IPR010920 LSM domain superfamily DOE60_RS15105 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15105 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15105 IPR005119 LysR, substrate-binding DOE60_RS15105 IPR000847 Transcription regulator HTH, LysR DOE60_RS15110 IPR006696 Protein of unknown function DUF423 DOE60_RS15115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS15115 IPR011224 Ribosomal RNA large subunit methyltransferase M DOE60_RS15115 IPR040739 RlmM ferredoxin-like domain DOE60_RS15115 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOE60_RS15120 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15120 IPR014036 DeoR C-terminal sensor domain DOE60_RS15120 IPR001034 DeoR-type HTH domain DOE60_RS15120 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS15120 IPR037171 NagB/RpiA transferase-like DOE60_RS15125 IPR023750 RbsD-like superfamily DOE60_RS15125 IPR023751 L-fucose mutarotase DOE60_RS15125 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU DOE60_RS15130 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE60_RS15130 IPR013450 L-fuculokinase DOE60_RS15130 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE60_RS15130 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE60_RS15130 IPR000577 Carbohydrate kinase, FGGY DOE60_RS15135 IPR038392 L-fucose isomerase, domain 2 superfamily DOE60_RS15135 IPR012888 L-fucose isomerase, N-terminal-1 DOE60_RS15135 IPR038393 L-fucose isomerase, domain 3 superfamily DOE60_RS15135 IPR015888 L-fucose isomerase, C-terminal DOE60_RS15135 IPR038391 L-fucose isomerase, domain 1 superfamily DOE60_RS15135 IPR012889 L-fucose isomerase, N-terminal-2 DOE60_RS15135 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily DOE60_RS15135 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE60_RS15135 IPR005763 L-fucose isomerase DOE60_RS15140 IPR036259 MFS transporter superfamily DOE60_RS15140 IPR020846 Major facilitator superfamily domain DOE60_RS15140 IPR011701 Major facilitator superfamily DOE60_RS15140 IPR005275 L-fucose permease FucP DOE60_RS15145 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS15145 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS15145 IPR004782 L-fucose phosphate aldolase DOE60_RS15150 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS15150 IPR013460 Lactaldehyde reductase DOE60_RS15150 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS15150 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS15155 IPR038969 Flap endonuclease DOE60_RS15155 IPR008918 Helix-hairpin-helix motif, class 2 DOE60_RS15155 IPR029060 PIN-like domain superfamily DOE60_RS15155 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE60_RS15155 IPR022895 Flap endonuclease Xni DOE60_RS15155 IPR020045 DNA polymerase I-like, H3TH domain DOE60_RS15155 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOE60_RS15155 IPR002421 5'-3' exonuclease, N-terminal DOE60_RS15165 IPR005131 Serine dehydratase beta chain DOE60_RS15165 IPR029009 Allosteric substrate binding domain superfamily DOE60_RS15165 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE60_RS15165 IPR005130 Serine dehydratase-like, alpha subunit DOE60_RS15170 IPR004694 Hydroxy amino acid transporter DOE60_RS15175 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily DOE60_RS15175 IPR031100 LOG family DOE60_RS15175 IPR021826 Domain of unknown function DUF3412 DOE60_RS15175 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal DOE60_RS15180 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DOE60_RS15180 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DOE60_RS15180 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DOE60_RS15185 IPR038228 Syd superfamily DOE60_RS15185 IPR009948 Syd DOE60_RS15195 IPR036814 YqcC-like superfamily DOE60_RS15195 IPR007384 Protein of unknown function UCP006257 DOE60_RS15195 IPR023376 YqcC-like domain DOE60_RS15200 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS15200 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS15200 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE60_RS15205 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS15205 IPR001094 Flavodoxin-like DOE60_RS15205 IPR029039 Flavoprotein-like superfamily DOE60_RS15215 IPR020846 Major facilitator superfamily domain DOE60_RS15215 IPR000849 Sugar phosphate transporter DOE60_RS15215 IPR036259 MFS transporter superfamily DOE60_RS15215 IPR011701 Major facilitator superfamily DOE60_RS15220 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE60_RS15220 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS15220 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS15220 IPR034598 D-Glucarate dehydratase-like DOE60_RS15220 IPR034593 Mandelate racemase-like DOE60_RS15220 IPR029017 Enolase-like, N-terminal DOE60_RS15220 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE60_RS15220 IPR029065 Enolase C-terminal domain-like DOE60_RS15225 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS15225 IPR017653 Glucarate dehydratase DOE60_RS15225 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS15225 IPR029017 Enolase-like, N-terminal DOE60_RS15225 IPR034593 Mandelate racemase-like DOE60_RS15225 IPR029065 Enolase C-terminal domain-like DOE60_RS15225 IPR034598 D-Glucarate dehydratase-like DOE60_RS15230 IPR036129 Glycerate kinase superfamily DOE60_RS15230 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE60_RS15230 IPR018193 Glycerate kinase, flavodoxin-like fold DOE60_RS15230 IPR004381 Glycerate kinase DOE60_RS15235 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE60_RS15235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS15235 IPR036641 HPT domain superfamily DOE60_RS15235 IPR019247 Histidine kinase BarA, N-terminal DOE60_RS15235 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS15235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS15235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS15235 IPR005467 Histidine kinase domain DOE60_RS15235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS15235 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS15235 IPR003660 HAMP domain DOE60_RS15235 IPR011006 CheY-like superfamily DOE60_RS15240 IPR030391 RNA methyltransferase TrmA, conserved site DOE60_RS15240 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS15240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS15240 IPR002792 TRAM domain DOE60_RS15240 IPR010280 (Uracil-5)-methyltransferase family DOE60_RS15240 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD DOE60_RS15240 IPR030390 RNA methyltransferase TrmA, active site DOE60_RS15245 IPR002912 ACT domain DOE60_RS15245 IPR012675 Beta-grasp domain superfamily DOE60_RS15245 IPR003607 HD/PDEase domain DOE60_RS15245 IPR004811 RelA/SpoT family DOE60_RS15245 IPR007685 RelA/SpoT DOE60_RS15245 IPR004095 TGS DOE60_RS15245 IPR012676 TGS-like DOE60_RS15245 IPR033655 RelA, TGS domain DOE60_RS15250 IPR011551 NTP pyrophosphohydrolase MazG DOE60_RS15250 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOE60_RS15255 IPR017456 CTP synthase, N-terminal DOE60_RS15255 IPR029062 Class I glutamine amidotransferase-like DOE60_RS15255 IPR017926 Glutamine amidotransferase DOE60_RS15255 IPR033828 CTP synthase GATase domain DOE60_RS15255 IPR004468 CTP synthase DOE60_RS15255 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15260 IPR000941 Enolase DOE60_RS15260 IPR020810 Enolase, C-terminal TIM barrel domain DOE60_RS15260 IPR029017 Enolase-like, N-terminal DOE60_RS15260 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS15260 IPR020809 Enolase, conserved site DOE60_RS15260 IPR020811 Enolase, N-terminal DOE60_RS15265 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria DOE60_RS15265 IPR024924 7-carboxy-7-deazaguanine synthase-like DOE60_RS15265 IPR013785 Aldolase-type TIM barrel DOE60_RS15265 IPR007197 Radical SAM DOE60_RS15270 IPR020605 Octanoyltransferase, conserved site DOE60_RS15270 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS15270 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE60_RS15270 IPR001279 Metallo-beta-lactamase DOE60_RS15270 IPR000544 Octanoyltransferase DOE60_RS15275 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family DOE60_RS15275 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily DOE60_RS15290 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS15290 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS15290 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS15290 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOE60_RS15290 IPR001094 Flavodoxin-like DOE60_RS15290 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS15290 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS15290 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding DOE60_RS15290 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily DOE60_RS15290 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain DOE60_RS15290 IPR029039 Flavoprotein-like superfamily DOE60_RS15290 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria DOE60_RS15295 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE60_RS15295 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit DOE60_RS15295 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE60_RS15295 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE60_RS15295 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE60_RS15300 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DOE60_RS15300 IPR002500 Phosphoadenosine phosphosulphate reductase DOE60_RS15300 IPR011800 Phosphoadenosine phosphosulphate reductase CysH DOE60_RS15300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS15305 IPR022747 Salmonella outer protein D DOE60_RS15310 IPR035011 CRISPR-associated endonuclease/helicase Cas3 DOE60_RS15310 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15310 IPR006474 Helicase Cas3, CRISPR-associated, core DOE60_RS15310 IPR001650 Helicase, C-terminal DOE60_RS15310 IPR038257 CRISPR-associated Cas3-type HD domain superfamily DOE60_RS15310 IPR006483 CRISPR-associated Cas3-type HD domain DOE60_RS15310 IPR011545 DEAD/DEAH box helicase domain DOE60_RS15310 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS15315 IPR013381 CRISPR-associated protein Cse1 DOE60_RS15325 IPR010148 CRISPR-associated protein, CT1975 DOE60_RS15330 IPR010147 CRISPR-associated protein, CasD DOE60_RS15330 IPR013422 CRISPR-associated protein Cas5, N-terminal DOE60_RS15330 IPR021124 CRISPR-associated protein, Cas5 DOE60_RS15340 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype DOE60_RS15340 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain DOE60_RS15340 IPR002729 CRISPR-associated protein Cas1 DOE60_RS15340 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain DOE60_RS15340 IPR033641 CRISPR-associated protein Cas1, type I-E DOE60_RS15345 IPR010152 CRISPR-associated protein Cas2 subtype DOE60_RS15350 IPR007484 Peptidase M28 DOE60_RS15355 IPR002500 Phosphoadenosine phosphosulphate reductase DOE60_RS15355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS15355 IPR011784 Sulphate adenylyltransferase, small subunit DOE60_RS15360 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE60_RS15360 IPR000795 Transcription factor, GTP-binding domain DOE60_RS15360 IPR011779 Sulphate adenylyltransferase, large subunit DOE60_RS15360 IPR005225 Small GTP-binding protein domain DOE60_RS15360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15360 IPR031157 Tr-type G domain, conserved site DOE60_RS15360 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DOE60_RS15360 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15365 IPR002891 Adenylyl-sulfate kinase DOE60_RS15370 IPR022721 Protein of unknown function DUF3561 DOE60_RS15375 IPR007060 Septum formation initiator FtsL/DivIC DOE60_RS15375 IPR023081 Cell division protein FtsB DOE60_RS15380 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DOE60_RS15380 IPR034683 Cytidylyltransferase IspD/TarI DOE60_RS15380 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DOE60_RS15380 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS15385 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DOE60_RS15385 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DOE60_RS15385 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DOE60_RS15390 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS15390 IPR011760 Pseudouridine synthase, TruD, insertion domain DOE60_RS15390 IPR020119 Pseudouridine synthase TruD, conserved site DOE60_RS15390 IPR001656 Pseudouridine synthase, TruD DOE60_RS15390 IPR042214 Pseudouridine synthase, TruD, catalytic domain DOE60_RS15395 IPR036523 SurE-like phosphatase/nucleotidase superfamily DOE60_RS15395 IPR002828 Survival protein SurE-like phosphatase/nucleotidase DOE60_RS15395 IPR030048 Survival protein SurE DOE60_RS15400 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DOE60_RS15400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS15405 IPR036779 LysM domain superfamily DOE60_RS15405 IPR016047 Peptidase M23 DOE60_RS15405 IPR018392 LysM domain DOE60_RS15405 IPR011055 Duplicated hybrid motif DOE60_RS15410 IPR009042 RNA polymerase sigma-70 region 1.2 DOE60_RS15410 IPR014284 RNA polymerase sigma-70 like domain DOE60_RS15410 IPR007630 RNA polymerase sigma-70 region 4 DOE60_RS15410 IPR007627 RNA polymerase sigma-70 region 2 DOE60_RS15410 IPR007624 RNA polymerase sigma-70 region 3 DOE60_RS15410 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15410 IPR013325 RNA polymerase sigma factor, region 2 DOE60_RS15410 IPR012761 RNA polymerase sigma factor RpoS DOE60_RS15410 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE60_RS15410 IPR000943 RNA polymerase sigma-70 DOE60_RS15420 IPR002830 UbiD decarboxylyase family DOE60_RS15420 IPR032902 Phenolic acid decarboxylase subunit C DOE60_RS15425 IPR036551 Flavin prenyltransferase-like DOE60_RS15425 IPR003382 Flavoprotein DOE60_RS15425 IPR004507 Flavin prenyltransferase UbiX-like DOE60_RS15425 IPR032901 Probable UbiX-like flavin prenyltransferase DOE60_RS15430 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15430 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15430 IPR023187 Transcriptional regulator MarR-type, conserved site DOE60_RS15430 IPR000835 MarR-type HTH domain DOE60_RS15435 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15435 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS15435 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15435 IPR037171 NagB/RpiA transferase-like DOE60_RS15435 IPR014036 DeoR C-terminal sensor domain DOE60_RS15435 IPR001034 DeoR-type HTH domain DOE60_RS15440 IPR036291 NAD(P)-binding domain superfamily DOE60_RS15440 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE60_RS15440 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE60_RS15440 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS15440 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE60_RS15440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS15440 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE60_RS15445 IPR042213 Nucleotide-binding, C-terminal domain superfamily DOE60_RS15445 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DOE60_RS15445 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DOE60_RS15445 IPR031475 Nucleotide-binding C-terminal domain DOE60_RS15450 IPR001303 Class II aldolase/adducin N-terminal DOE60_RS15450 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE60_RS15455 IPR013022 Xylose isomerase-like, TIM barrel domain DOE60_RS15455 IPR036237 Xylose isomerase-like superfamily DOE60_RS15455 IPR026040 Hydroxypyruvate isomerase-like DOE60_RS15460 IPR036291 NAD(P)-binding domain superfamily DOE60_RS15460 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS15465 IPR003474 Gluconate transporter DOE60_RS15470 IPR005748 DNA mismatch repair protein MutS DOE60_RS15470 IPR036678 MutS, connector domain superfamily DOE60_RS15470 IPR007696 DNA mismatch repair protein MutS, core DOE60_RS15470 IPR007861 DNA mismatch repair protein MutS, clamp DOE60_RS15470 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOE60_RS15470 IPR000432 DNA mismatch repair protein MutS, C-terminal DOE60_RS15470 IPR016151 DNA mismatch repair protein MutS, N-terminal DOE60_RS15470 IPR007860 DNA mismatch repair protein MutS, connector domain DOE60_RS15470 IPR017261 DNA mismatch repair protein MutS/MSH DOE60_RS15470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15470 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DOE60_RS15475 IPR006830 InvH outer membrane lipoprotein DOE60_RS15480 IPR009057 Homeobox-like domain superfamily DOE60_RS15480 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS15480 IPR018062 HTH domain AraC-type, conserved site DOE60_RS15485 IPR004846 Type II/III secretion system DOE60_RS15485 IPR004845 Type II secretion system GspD, conserved site DOE60_RS15485 IPR005644 NolW-like DOE60_RS15485 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOE60_RS15485 IPR038591 NolW-like superfamily DOE60_RS15490 IPR003520 Salmonella/Shigella invasion protein E DOE60_RS15490 IPR010812 Hypersensitivity response secretion-like, HrpJ DOE60_RS15490 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC DOE60_RS15495 IPR001712 Type III secretion system FHIPEP DOE60_RS15495 IPR042193 FHIPEP, domain 3 DOE60_RS15495 IPR025505 FHIPEP conserved site DOE60_RS15495 IPR006302 Type III secretion protein HrcV DOE60_RS15495 IPR042194 FHIPEP, domain 1 DOE60_RS15495 IPR042196 FHIPEP, domain 4 DOE60_RS15500 IPR003065 Surface presentation of antigens protein SpaK DOE60_RS15505 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS15505 IPR040627 T3SS EscN ATPase, C-terminal DOE60_RS15505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15505 IPR005714 ATPase, type III secretion system, FliI/YscN DOE60_RS15505 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE60_RS15505 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE60_RS15505 IPR003593 AAA+ ATPase domain DOE60_RS15510 IPR002954 Salmonella surface presentation of antigen M protein DOE60_RS15515 IPR003066 Salmonella invasion protein InvJ DOE60_RS15520 IPR001543 Surface presentation of antigen (SpoA) DOE60_RS15520 IPR003283 Type III secretion system outer membrane, SpaO DOE60_RS15520 IPR036429 SpoA-like superfamily DOE60_RS15520 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO DOE60_RS15525 IPR005838 Type III secretion system inner membrane P protein DOE60_RS15525 IPR005773 Yop virulence translocation protein R DOE60_RS15530 IPR002191 Bacterial export protein family 3 DOE60_RS15530 IPR006306 Type III secretion protein HrpO DOE60_RS15535 IPR002010 Type III secretion system inner membrane R protein DOE60_RS15535 IPR006304 Type III secretion protein SpaR/YscT DOE60_RS15540 IPR006135 Type III secretion system substrate exporter DOE60_RS15540 IPR029025 Type III secretion system substrate exporter, C-terminal DOE60_RS15540 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOE60_RS15545 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS15545 IPR011716 Tetratricopeptide TPR-3 DOE60_RS15545 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup DOE60_RS15545 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DOE60_RS15550 IPR032391 Invasin IpaB, N-terminal DOE60_RS15550 IPR006972 Secretion system effector C, SseC-like DOE60_RS15550 IPR003895 Type III secretion system, invasin protein B DOE60_RS15555 IPR005427 Salmonella/Shigella invasin protein C DOE60_RS15560 IPR009483 Type III secretion systems tip complex components DOE60_RS15560 IPR036708 BipD-like superfamily DOE60_RS15565 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain superfamily DOE60_RS15565 IPR015138 Salmonella invasion protein A, N-terminal DOE60_RS15565 IPR023225 Salmonella invasion protein A, chaperone-binding DOE60_RS15570 IPR009081 Phosphopantetheine binding ACP domain DOE60_RS15570 IPR036736 ACP-like superfamily DOE60_RS15585 IPR014773 Virulence factor YopE, GAP domain DOE60_RS15585 IPR016130 Protein-tyrosine phosphatase, active site DOE60_RS15585 IPR015203 SicP binding DOE60_RS15585 IPR037168 Virulence factor YopE, GAP domain superfamily DOE60_RS15585 IPR000242 PTP type protein phosphatase DOE60_RS15585 IPR000387 Tyrosine specific protein phosphatases domain DOE60_RS15585 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH DOE60_RS15585 IPR011070 Globular protein, non-globular alpha/beta subunit DOE60_RS15585 IPR029021 Protein-tyrosine phosphatase-like DOE60_RS15585 IPR003595 Protein-tyrosine phosphatase, catalytic DOE60_RS15590 IPR008258 Transglycosylase SLT domain 1 DOE60_RS15590 IPR023346 Lysozyme-like domain superfamily DOE60_RS15595 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS15595 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS15595 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS15595 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS15595 IPR019734 Tetratricopeptide repeat DOE60_RS15595 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS15595 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15600 IPR018062 HTH domain AraC-type, conserved site DOE60_RS15600 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS15600 IPR009057 Homeobox-like domain superfamily DOE60_RS15600 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS15605 IPR019029 Type III secretion system, PrgH/EprH-like DOE60_RS15605 IPR013387 Type III secretion system, PrgH/EprH DOE60_RS15610 IPR037203 Type III secretion, needle-protein-like superfamily DOE60_RS15610 IPR011841 Type III secretion system, needle protein DOE60_RS15610 IPR021123 Type III secretion, needle-protein-like DOE60_RS15620 IPR006182 Secretory protein YscJ/FliF DOE60_RS15620 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOE60_RS15625 IPR013388 Type III secretion apparatus protein OrgA/MxiK DOE60_RS15640 IPR018062 HTH domain AraC-type, conserved site DOE60_RS15640 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS15640 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS15640 IPR009057 Homeobox-like domain superfamily DOE60_RS15655 IPR001626 ABC transporter, TroCD-like DOE60_RS15655 IPR037294 ABC transporter, BtuC-like DOE60_RS15660 IPR037294 ABC transporter, BtuC-like DOE60_RS15660 IPR001626 ABC transporter, TroCD-like DOE60_RS15665 IPR003593 AAA+ ATPase domain DOE60_RS15665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15665 IPR017871 ABC transporter, conserved site DOE60_RS15665 IPR003439 ABC transporter-like DOE60_RS15670 IPR006128 Adhesion lipoprotein DOE60_RS15670 IPR006127 Periplasmic solute binding protein, ZnuA-like DOE60_RS15670 IPR006129 Adhesin B DOE60_RS15675 IPR020483 Uncharacterised protein family YgbA DOE60_RS15680 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS15680 IPR003593 AAA+ ATPase domain DOE60_RS15680 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS15680 IPR029016 GAF-like domain superfamily DOE60_RS15680 IPR009057 Homeobox-like domain superfamily DOE60_RS15680 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15680 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS15680 IPR003018 GAF domain DOE60_RS15685 IPR011854 Carbamoyl dehydratase HypE DOE60_RS15685 IPR010918 PurM-like, C-terminal domain DOE60_RS15685 IPR036676 PurM-like, C-terminal domain superfamily DOE60_RS15685 IPR016188 PurM-like, N-terminal domain DOE60_RS15685 IPR036921 PurM-like, N-terminal domain superfamily DOE60_RS15690 IPR042243 HypD, domain 2 DOE60_RS15690 IPR042244 HypD, domain 1 DOE60_RS15690 IPR002780 Hydrogenase formation HypD protein DOE60_RS15695 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE60_RS15695 IPR019812 Hydrogenase assembly chaperone, conserved site DOE60_RS15695 IPR037254 HupF/HypC superfamily DOE60_RS15700 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE60_RS15700 IPR004392 Hydrogenase maturation factor HypB DOE60_RS15700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15705 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE60_RS15705 IPR000688 Hydrogenase maturation factor HypA/HybF DOE60_RS15715 IPR021285 Transcription regulator, HycA DOE60_RS15720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS15720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS15725 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE60_RS15725 IPR003918 NADH:ubiquinone oxidoreductase DOE60_RS15730 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DOE60_RS15730 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DOE60_RS15735 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DOE60_RS15735 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DOE60_RS15735 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DOE60_RS15735 IPR029014 [NiFe]-hydrogenase, large subunit DOE60_RS15735 IPR001501 Nickel-dependent hydrogenase, large subunit DOE60_RS15735 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DOE60_RS15735 IPR001135 NADH-quinone oxidoreductase, subunit D DOE60_RS15740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS15740 IPR010226 NADH-quinone oxidoreductase, chain I DOE60_RS15740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS15745 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DOE60_RS15745 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE60_RS15750 IPR010005 Formate hydrogenlyase maturation HycH DOE60_RS15755 IPR004420 Peptidase A31, hydrogenase maturation protease HycI DOE60_RS15755 IPR023430 Peptidase HybD-like domain superfamily DOE60_RS15755 IPR000671 Peptidase A31 family DOE60_RS15765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS15765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS15770 IPR001792 Acylphosphatase-like domain DOE60_RS15770 IPR036046 Acylphosphatase-like domain superfamily DOE60_RS15770 IPR017968 Acylphosphatase, conserved site DOE60_RS15770 IPR011125 Zinc finger, HypF-type DOE60_RS15770 IPR006070 YrdC-like domain DOE60_RS15770 IPR041440 HypF, Kae1-like domain DOE60_RS15770 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE60_RS15770 IPR004421 Carbamoyltransferase, HypF-type DOE60_RS15775 IPR041364 Rubredoxin binding domain DOE60_RS15775 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS15775 IPR023753 FAD/NAD(P)-binding domain DOE60_RS15775 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase DOE60_RS15780 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin DOE60_RS15780 IPR008254 Flavodoxin/nitric oxide synthase DOE60_RS15780 IPR029039 Flavoprotein-like superfamily DOE60_RS15780 IPR001279 Metallo-beta-lactamase DOE60_RS15780 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS15780 IPR024934 Rubredoxin-like domain DOE60_RS15780 IPR016440 Rubredoxin-oxygen oxidoreductase DOE60_RS15780 IPR024935 Rubredoxin domain DOE60_RS15785 IPR003018 GAF domain DOE60_RS15785 IPR003593 AAA+ ATPase domain DOE60_RS15785 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS15785 IPR029016 GAF-like domain superfamily DOE60_RS15785 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS15785 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS15785 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS15785 IPR023944 Anaerobic nitric oxide reductase transcription regulator DOE60_RS15785 IPR009057 Homeobox-like domain superfamily DOE60_RS15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15790 IPR000644 CBS domain DOE60_RS15790 IPR035474 KpsF-like, SIS domain DOE60_RS15790 IPR001347 Sugar isomerase (SIS) DOE60_RS15790 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DOE60_RS15795 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15795 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15795 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS15795 IPR037171 NagB/RpiA transferase-like DOE60_RS15795 IPR014036 DeoR C-terminal sensor domain DOE60_RS15795 IPR001034 DeoR-type HTH domain DOE60_RS15800 IPR009693 Glucitol operon activator DOE60_RS15805 IPR036291 NAD(P)-binding domain superfamily DOE60_RS15805 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS15805 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS15810 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily DOE60_RS15810 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup DOE60_RS15810 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component DOE60_RS15815 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal DOE60_RS15815 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal DOE60_RS15815 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II DOE60_RS15820 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor DOE60_RS15825 IPR031304 Transglycosylase SLT domain 2 DOE60_RS15825 IPR011757 Lytic transglycosylase MltB DOE60_RS15825 IPR023346 Lysozyme-like domain superfamily DOE60_RS15835 IPR008136 CinA, C-terminal DOE60_RS15835 IPR036653 CinA-like, C-terminal DOE60_RS15840 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DOE60_RS15840 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOE60_RS15840 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15840 IPR020584 DNA recombination/repair protein RecA, conserved site DOE60_RS15840 IPR013765 DNA recombination and repair protein RecA DOE60_RS15840 IPR003593 AAA+ ATPase domain DOE60_RS15840 IPR023400 DNA recombination and repair protein RecA, C-terminal DOE60_RS15845 IPR003783 Regulatory protein RecX DOE60_RS15845 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15855 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOE60_RS15855 IPR003156 DHHA1 domain DOE60_RS15855 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DOE60_RS15855 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS15855 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOE60_RS15855 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DOE60_RS15855 IPR002318 Alanine-tRNA ligase, class IIc DOE60_RS15855 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DOE60_RS15855 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DOE60_RS15860 IPR003751 Translational regulator CsrA DOE60_RS15860 IPR036107 Carbon storage regulator superfamily DOE60_RS15890 IPR006439 HAD hydrolase, subfamily IA DOE60_RS15890 IPR036412 HAD-like superfamily DOE60_RS15890 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS15890 IPR010976 Beta-phosphoglucomutase hydrolase DOE60_RS15890 IPR023214 HAD superfamily DOE60_RS15890 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS15895 IPR032816 SNARE associated Golgi protein DOE60_RS15900 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE60_RS15900 IPR007370 Glutamate--cysteine ligase DOE60_RS15900 IPR006334 Glutamate--cysteine ligase, monofunctional DOE60_RS15905 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE60_RS15905 IPR003815 S-ribosylhomocysteinase (LuxS) DOE60_RS15905 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily DOE60_RS15925 IPR020846 Major facilitator superfamily domain DOE60_RS15925 IPR004638 Drug resistance transporter EmrB-like DOE60_RS15925 IPR036259 MFS transporter superfamily DOE60_RS15925 IPR011701 Major facilitator superfamily DOE60_RS15930 IPR005694 Efflux pump membrane protein DOE60_RS15930 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS15935 IPR000835 MarR-type HTH domain DOE60_RS15935 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15935 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15935 IPR023187 Transcriptional regulator MarR-type, conserved site DOE60_RS15940 IPR036259 MFS transporter superfamily DOE60_RS15940 IPR020846 Major facilitator superfamily domain DOE60_RS15940 IPR011701 Major facilitator superfamily DOE60_RS15945 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE60_RS15950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS15950 IPR035906 MetI-like superfamily DOE60_RS15955 IPR003593 AAA+ ATPase domain DOE60_RS15955 IPR003439 ABC transporter-like DOE60_RS15955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS15955 IPR005892 Glycine betaine transport ATP-binding subunit DOE60_RS15955 IPR000644 CBS domain DOE60_RS15955 IPR017871 ABC transporter, conserved site DOE60_RS15965 IPR033909 Ribonucleotide reductase small subunit DOE60_RS15965 IPR030475 Ribonucleotide reductase small subunit, acitve site DOE60_RS15965 IPR009078 Ferritin-like superfamily DOE60_RS15965 IPR000358 Ribonucleotide reductase small subunit family DOE60_RS15965 IPR012348 Ribonucleotide reductase-like DOE60_RS15965 IPR026494 Ribonucleoside reductase subunit beta, NrdF DOE60_RS15970 IPR013554 Ribonucleotide reductase N-terminal DOE60_RS15970 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DOE60_RS15970 IPR013509 Ribonucleotide reductase large subunit, N-terminal DOE60_RS15970 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE DOE60_RS15970 IPR013346 Ribonucleotide reductase, class I , alpha subunit DOE60_RS15970 IPR039718 Ribonucleoside-diphosphate reductase large subunit DOE60_RS15970 IPR000788 Ribonucleotide reductase large subunit, C-terminal DOE60_RS15975 IPR004465 Ribonucleotide reductase Class Ib, NrdI DOE60_RS15975 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial DOE60_RS15975 IPR029039 Flavoprotein-like superfamily DOE60_RS15980 IPR036249 Thioredoxin-like superfamily DOE60_RS15980 IPR011909 Glutaredoxin-like protein NrdH DOE60_RS15980 IPR002109 Glutaredoxin DOE60_RS15990 IPR029032 AhpD-like DOE60_RS15990 IPR003779 Carboxymuconolactone decarboxylase-like DOE60_RS15990 IPR004675 Alkylhydroperoxidase AhpD core DOE60_RS15995 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS15995 IPR004839 Aminotransferase, class I/classII DOE60_RS15995 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS15995 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS15995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS15995 IPR000524 Transcription regulator HTH, GntR DOE60_RS16000 IPR010279 Inner membrane protein YqjD/ElaB DOE60_RS16005 IPR018994 Protein of unknown function DUF2002 DOE60_RS16010 IPR010574 L-alanine exporter AlaE DOE60_RS16020 IPR001801 Histone-like protein H-NS DOE60_RS16020 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOE60_RS16020 IPR027444 Histone-like protein H-NS, C-terminal domain DOE60_RS16020 IPR027454 Histone-like protein H-NS, N-terminal DOE60_RS16030 IPR021309 Protein of unknown function DUF2892 DOE60_RS16030 IPR001763 Rhodanese-like domain DOE60_RS16030 IPR036873 Rhodanese-like domain superfamily DOE60_RS16035 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16035 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS16035 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS16035 IPR001845 HTH ArsR-type DNA-binding domain DOE60_RS16040 IPR000612 Proteolipid membrane potential modulator DOE60_RS16050 IPR014004 Transport-associated and nodulation domain, bacteria DOE60_RS16050 IPR018392 LysM domain DOE60_RS16050 IPR007055 BON domain DOE60_RS16050 IPR036779 LysM domain superfamily DOE60_RS16055 IPR000524 Transcription regulator HTH, GntR DOE60_RS16055 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS16055 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16055 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS16055 IPR011711 GntR, C-terminal DOE60_RS16060 IPR011265 GABA permease DOE60_RS16060 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS16060 IPR004840 Amino acid permease, conserved site DOE60_RS16065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS16065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS16065 IPR004632 4-aminobutyrate aminotransferase, bacterial DOE60_RS16065 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS16065 IPR005814 Aminotransferase class-III DOE60_RS16070 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS16070 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS16070 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS16070 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS16070 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS16070 IPR015590 Aldehyde dehydrogenase domain DOE60_RS16070 IPR010102 Succinate semialdehyde dehydrogenase DOE60_RS16075 IPR030862 L-2-hydroxyglutarate dehydrogenase DOE60_RS16075 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS16075 IPR006076 FAD dependent oxidoreductase DOE60_RS16080 IPR042098 Taurine dioxygenase TauD-like superfamily DOE60_RS16080 IPR015038 Glutarate 2-hydroxylase GlaH DOE60_RS16085 IPR002823 Protein of unknown function DUF112, transmembrane DOE60_RS16100 IPR011006 CheY-like superfamily DOE60_RS16100 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS16100 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS16100 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS16100 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16100 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS16105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS16105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS16105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS16105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS16105 IPR003660 HAMP domain DOE60_RS16105 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS16105 IPR005467 Histidine kinase domain DOE60_RS16110 IPR011541 Nickel/cobalt transporter, high-affinity DOE60_RS16110 IPR004688 Transition metal uptake transporter nickel/cobalt DOE60_RS16130 IPR007488 Protein of unknown function DUF535 DOE60_RS16140 IPR001646 Pentapeptide repeat DOE60_RS16150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS16150 IPR010105 TonB-dependent siderophore receptor DOE60_RS16150 IPR010917 TonB-dependent receptor, conserved site DOE60_RS16150 IPR039426 Vitamin B12 transporter BtuB-like DOE60_RS16150 IPR012910 TonB-dependent receptor, plug domain DOE60_RS16150 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS16150 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS16155 IPR029058 Alpha/Beta hydrolase fold DOE60_RS16155 IPR000801 Putative esterase DOE60_RS16165 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS16165 IPR003593 AAA+ ATPase domain DOE60_RS16165 IPR039421 Type I protein exporter DOE60_RS16165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16165 IPR017871 ABC transporter, conserved site DOE60_RS16165 IPR003439 ABC transporter-like DOE60_RS16165 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS16170 IPR030953 Glycosyltransferase, activator-dependent family DOE60_RS16170 IPR010610 Domain of unknown function DUF1205 DOE60_RS16180 IPR009057 Homeobox-like domain superfamily DOE60_RS16180 IPR006118 Recombinase, conserved site DOE60_RS16180 IPR006119 Resolvase, N-terminal catalytic domain DOE60_RS16180 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOE60_RS16180 IPR006120 Resolvase, HTH domain DOE60_RS16185 IPR001029 Flagellin, D0/D1 domain DOE60_RS16185 IPR001492 Flagellin DOE60_RS16185 IPR014981 Flagellin D3 DOE60_RS16190 IPR003223 Flagellin phase1 repressor DOE60_RS16200 IPR035959 RutC-like superfamily DOE60_RS16200 IPR006175 YjgF/YER057c/UK114 family DOE60_RS16200 IPR019897 RidA, conserved site DOE60_RS16200 IPR006056 RidA family DOE60_RS16205 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE60_RS16205 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS16205 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS16210 IPR039446 Transcriptional regulator DauR-like DOE60_RS16210 IPR013559 YheO-like DOE60_RS16210 IPR039445 Transcriptional regulator DauR-like, HTH domain DOE60_RS16245 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS16245 IPR010129 Type I secretion membrane fusion protein, HlyD family DOE60_RS16250 IPR011917 ABC transporter, lipid A export, MsbA DOE60_RS16250 IPR017871 ABC transporter, conserved site DOE60_RS16250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16250 IPR003593 AAA+ ATPase domain DOE60_RS16250 IPR003439 ABC transporter-like DOE60_RS16250 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS16250 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS16265 IPR020081 SsrA-binding protein, conserved site DOE60_RS16265 IPR000037 SsrA-binding protein DOE60_RS16265 IPR023620 Small protein B DOE60_RS16270 IPR005031 Coenzyme Q-binding protein COQ10, START domain DOE60_RS16270 IPR023393 START-like domain superfamily DOE60_RS16275 IPR005346 RnfH protein DOE60_RS16275 IPR037021 RnfH superfamily DOE60_RS16275 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE60_RS16280 IPR007450 Lipoprotein SmpA/OmlA DOE60_RS16280 IPR037873 BamE-like DOE60_RS16280 IPR026592 Outer membrane protein assembly factor BamE DOE60_RS16285 IPR003395 RecF/RecN/SMC, N-terminal DOE60_RS16285 IPR004604 DNA recombination/repair protein RecN DOE60_RS16285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16290 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE60_RS16290 IPR002504 NAD kinase DOE60_RS16290 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOE60_RS16290 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DOE60_RS16300 IPR013805 GrpE nucleotide exchange factor, coiled-coil DOE60_RS16300 IPR009012 GrpE nucleotide exchange factor, head DOE60_RS16300 IPR000740 GrpE nucleotide exchange factor DOE60_RS16305 IPR005170 Transporter-associated domain DOE60_RS16305 IPR000644 CBS domain DOE60_RS16305 IPR002550 CNNM, transmembrane domain DOE60_RS16305 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS16305 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS16310 IPR002541 Cytochrome c assembly protein DOE60_RS16320 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DOE60_RS16320 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOE60_RS16320 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DOE60_RS16320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16320 IPR003593 AAA+ ATPase domain DOE60_RS16320 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOE60_RS16320 IPR022941 Signal recognition particle, SRP54 subunit DOE60_RS16320 IPR004780 Signal recognition particle protein DOE60_RS16320 IPR013822 Signal recognition particle SRP54, helical bundle DOE60_RS16325 IPR023803 Ribosomal protein S16 domain superfamily DOE60_RS16325 IPR020592 Ribosomal protein S16, conserved site DOE60_RS16325 IPR000307 Ribosomal protein S16 DOE60_RS16330 IPR027275 PRC-barrel domain DOE60_RS16330 IPR011033 PRC-barrel-like superfamily DOE60_RS16330 IPR002676 RimM, N-terminal DOE60_RS16330 IPR036976 RimM, N-terminal domain superfamily DOE60_RS16330 IPR009000 Translation protein, beta-barrel domain superfamily DOE60_RS16330 IPR011961 16S rRNA processing protein RimM DOE60_RS16335 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS16335 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DOE60_RS16335 IPR029028 Alpha/beta knot methyltransferases DOE60_RS16335 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DOE60_RS16335 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DOE60_RS16340 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS16340 IPR001857 Ribosomal protein L19 DOE60_RS16340 IPR018257 Ribosomal protein L19, conserved site DOE60_RS16340 IPR038657 Ribosomal protein L19 superfamily DOE60_RS16345 IPR000160 GGDEF domain DOE60_RS16345 IPR029787 Nucleotide cyclase DOE60_RS16345 IPR003660 HAMP domain DOE60_RS16345 IPR033417 Periplasmic sensor domain CHASE8 DOE60_RS16350 IPR025293 YfiR/HmsC-like DOE60_RS16355 IPR006219 DHAP synthase, class 1 DOE60_RS16355 IPR013785 Aldolase-type TIM barrel DOE60_RS16355 IPR006218 DAHP synthetase I/KDSA DOE60_RS16360 IPR003099 Prephenate dehydrogenase DOE60_RS16360 IPR036291 NAD(P)-binding domain superfamily DOE60_RS16360 IPR011277 Chorismate mutase, T-protein DOE60_RS16360 IPR002701 Chorismate mutase II, prokaryotic-type DOE60_RS16360 IPR036979 Chorismate mutase domain superfamily DOE60_RS16360 IPR036263 Chorismate mutase type II superfamily DOE60_RS16360 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein DOE60_RS16360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS16365 IPR013658 SMP-30/Gluconolactonase/LRE-like region DOE60_RS16365 IPR011042 Six-bladed beta-propeller, TolB-like DOE60_RS16365 IPR005511 Senescence marker protein-30 (SMP-30) DOE60_RS16370 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DOE60_RS16370 IPR036263 Chorismate mutase type II superfamily DOE60_RS16370 IPR018528 Prephenate dehydratase, conserved site DOE60_RS16370 IPR002912 ACT domain DOE60_RS16370 IPR001086 Prephenate dehydratase DOE60_RS16370 IPR010952 Chorismate mutase, gammaproteobacteria DOE60_RS16370 IPR036979 Chorismate mutase domain superfamily DOE60_RS16370 IPR002701 Chorismate mutase II, prokaryotic-type DOE60_RS16380 IPR036567 Ribosome hibernation promotion factor-like DOE60_RS16380 IPR003489 Ribosome hibernation promoting factor/RaiA DOE60_RS16385 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS16385 IPR017689 Outer membrane protein assembly factor BamD DOE60_RS16385 IPR039565 Outer membrane lipoprotein BamD-like DOE60_RS16390 IPR006225 Pseudouridine synthase, RluC/RluD DOE60_RS16390 IPR002942 RNA-binding S4 domain DOE60_RS16390 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS16390 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS16390 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE60_RS16390 IPR036986 RNA-binding S4 domain superfamily DOE60_RS16395 IPR011324 Cytotoxic necrotizing factor-like, catalytic DOE60_RS16395 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DOE60_RS16395 IPR003730 Multi-copper polyphenol oxidoreductase DOE60_RS16400 IPR003959 ATPase, AAA-type, core DOE60_RS16400 IPR017730 Chaperonin ClpB DOE60_RS16400 IPR019489 Clp ATPase, C-terminal DOE60_RS16400 IPR036628 Clp, N-terminal domain superfamily DOE60_RS16400 IPR003593 AAA+ ATPase domain DOE60_RS16400 IPR001270 ClpA/B family DOE60_RS16400 IPR018368 ClpA/B, conserved site 1 DOE60_RS16400 IPR004176 Clp, N-terminal DOE60_RS16400 IPR041546 ClpA/ClpB, AAA lid domain DOE60_RS16400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16400 IPR028299 ClpA/B, conserved site 2 DOE60_RS16435 IPR005828 Major facilitator, sugar transporter-like DOE60_RS16435 IPR020846 Major facilitator superfamily domain DOE60_RS16435 IPR036259 MFS transporter superfamily DOE60_RS16435 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS16435 IPR005829 Sugar transporter, conserved site DOE60_RS16440 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein DOE60_RS16440 IPR017028 Uncharacterised conserved protein UCP034456 DOE60_RS16445 IPR016270 CDP-alcohol phosphatidyltransferase class-II family DOE60_RS16445 IPR025202 Phospholipase D-like domain DOE60_RS16445 IPR001736 Phospholipase D/Transphosphatidylase DOE60_RS16450 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS16450 IPR011761 ATP-grasp fold DOE60_RS16450 IPR036291 NAD(P)-binding domain superfamily DOE60_RS16450 IPR016102 Succinyl-CoA synthetase-like DOE60_RS16450 IPR000182 GNAT domain DOE60_RS16450 IPR003781 CoA-binding DOE60_RS16450 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DOE60_RS16450 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS16455 IPR005636 DTW DOE60_RS16455 IPR039262 DTW domain-containing protein 2 DOE60_RS16460 IPR013766 Thioredoxin domain DOE60_RS16460 IPR017937 Thioredoxin, conserved site DOE60_RS16460 IPR036249 Thioredoxin-like superfamily DOE60_RS16460 IPR005746 Thioredoxin DOE60_RS16465 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS16465 IPR004441 RNA methyltransferase TrmH family DOE60_RS16465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS16465 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted DOE60_RS16465 IPR029028 Alpha/beta knot methyltransferases DOE60_RS16465 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOE60_RS16465 IPR029064 50S ribosomal protein L30e-like DOE60_RS16470 IPR002043 Uracil-DNA glycosylase family 1 DOE60_RS16470 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOE60_RS16470 IPR018085 Uracil-DNA glycosylase, active site DOE60_RS16470 IPR005122 Uracil-DNA glycosylase-like DOE60_RS16475 IPR011140 Autonomous glycyl radical cofactor GrcA DOE60_RS16475 IPR001150 Glycine radical domain DOE60_RS16475 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE60_RS16480 IPR014014 RNA helicase, DEAD-box type, Q motif DOE60_RS16480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16480 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE60_RS16480 IPR001650 Helicase, C-terminal DOE60_RS16480 IPR028621 ATP-dependent RNA helicase SrmB DOE60_RS16480 IPR011545 DEAD/DEAH box helicase domain DOE60_RS16480 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS16485 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS16485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS16485 IPR007848 Methyltransferase small domain DOE60_RS16485 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase DOE60_RS16490 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE60_RS16490 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE60_RS16490 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS16490 IPR005288 L-aspartate oxidase DOE60_RS16490 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE60_RS16490 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE60_RS16500 IPR007627 RNA polymerase sigma-70 region 2 DOE60_RS16500 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DOE60_RS16500 IPR014284 RNA polymerase sigma-70 like domain DOE60_RS16500 IPR039425 RNA polymerase sigma-70 like DOE60_RS16500 IPR014286 RNA polymerase sigma-70 RpoE type DOE60_RS16500 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DOE60_RS16500 IPR013325 RNA polymerase sigma factor, region 2 DOE60_RS16500 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE60_RS16500 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16505 IPR005573 Anti sigma-E protein RseA, C-terminal DOE60_RS16505 IPR005572 Anti sigma-E protein RseA, N-terminal DOE60_RS16505 IPR026279 Sigma-E factor negative regulatory protein RseA DOE60_RS16505 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily DOE60_RS16510 IPR033436 MucB/RseB, C-terminal DOE60_RS16510 IPR038484 MucB/RseB, C-terminal domain superfamily DOE60_RS16510 IPR033434 MucB/RseB, N-terminal DOE60_RS16510 IPR005588 MucB/RseB DOE60_RS16515 IPR026268 Protein RseC DOE60_RS16515 IPR007359 Positive regulator of sigma(E), RseC/MucC DOE60_RS16525 IPR035654 Elongation factor 4, domain IV DOE60_RS16525 IPR000795 Transcription factor, GTP-binding domain DOE60_RS16525 IPR005225 Small GTP-binding protein domain DOE60_RS16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16525 IPR031157 Tr-type G domain, conserved site DOE60_RS16525 IPR038363 LepA, C-terminal domain superfamily DOE60_RS16525 IPR013842 GTP-binding protein LepA, C-terminal DOE60_RS16525 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE60_RS16525 IPR006297 Elongation factor 4 DOE60_RS16525 IPR035647 EF-G domain III/V-like DOE60_RS16525 IPR000640 Elongation factor EFG, domain V-like DOE60_RS16530 IPR019533 Peptidase S26 DOE60_RS16530 IPR036286 LexA/Signal peptidase-like superfamily DOE60_RS16530 IPR019758 Peptidase S26A, signal peptidase I, conserved site DOE60_RS16530 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DOE60_RS16530 IPR019756 Peptidase S26A, signal peptidase I, serine active site DOE60_RS16530 IPR000223 Peptidase S26A, signal peptidase I DOE60_RS16540 IPR011907 Ribonuclease III DOE60_RS16540 IPR036389 Ribonuclease III, endonuclease domain superfamily DOE60_RS16540 IPR000999 Ribonuclease III domain DOE60_RS16540 IPR014720 Double-stranded RNA-binding domain DOE60_RS16545 IPR030388 Era-type guanine nucleotide-binding (G) domain DOE60_RS16545 IPR005662 GTP-binding protein Era DOE60_RS16545 IPR006073 GTP binding domain DOE60_RS16545 IPR005225 Small GTP-binding protein domain DOE60_RS16545 IPR004044 K Homology domain, type 2 DOE60_RS16545 IPR015946 K homology domain-like, alpha/beta DOE60_RS16545 IPR009019 K homology domain superfamily, prokaryotic type DOE60_RS16545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16550 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS16550 IPR003717 Recombination protein O, RecO DOE60_RS16550 IPR022572 DNA replication/recombination mediator RecO, N-terminal DOE60_RS16550 IPR037278 ARFGAP/RecO-like zinc finger DOE60_RS16555 IPR036130 Pyridoxine 5'-phosphate synthase DOE60_RS16555 IPR013785 Aldolase-type TIM barrel DOE60_RS16555 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DOE60_RS16560 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE60_RS16560 IPR008278 4'-phosphopantetheinyl transferase domain DOE60_RS16560 IPR004568 Phosphopantetheine-protein transferase domain DOE60_RS16560 IPR002582 Holo-[acyl carrier protein] synthase DOE60_RS16565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS16565 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS16570 IPR035472 RpiR-like, SIS domain DOE60_RS16570 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16570 IPR001347 Sugar isomerase (SIS) DOE60_RS16570 IPR009057 Homeobox-like domain superfamily DOE60_RS16570 IPR000281 Helix-turn-helix protein RpiR DOE60_RS16575 IPR005486 Glucokinase regulatory protein, conserved site DOE60_RS16575 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein DOE60_RS16575 IPR001347 Sugar isomerase (SIS) DOE60_RS16575 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ DOE60_RS16580 IPR036878 Glucose permease domain IIB DOE60_RS16580 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE60_RS16580 IPR001996 Phosphotransferase system, IIB component, type 1 DOE60_RS16580 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE60_RS16580 IPR003352 Phosphotransferase system, EIIC DOE60_RS16585 IPR023214 HAD superfamily DOE60_RS16585 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB DOE60_RS16585 IPR036412 HAD-like superfamily DOE60_RS16590 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE60_RS16590 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE60_RS16590 IPR016193 Cytidine deaminase-like DOE60_RS16590 IPR028883 tRNA-specific adenosine deaminase DOE60_RS16595 IPR008258 Transglycosylase SLT domain 1 DOE60_RS16595 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS16595 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS16595 IPR023703 Membrane-bound lytic murein transglycosylase F DOE60_RS16595 IPR023346 Lysozyme-like domain superfamily DOE60_RS16605 IPR017926 Glutamine amidotransferase DOE60_RS16605 IPR010918 PurM-like, C-terminal domain DOE60_RS16605 IPR036676 PurM-like, C-terminal domain superfamily DOE60_RS16605 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DOE60_RS16605 IPR029062 Class I glutamine amidotransferase-like DOE60_RS16605 IPR036921 PurM-like, N-terminal domain superfamily DOE60_RS16605 IPR010073 Phosphoribosylformylglycinamidine synthase PurL DOE60_RS16605 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily DOE60_RS16605 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal DOE60_RS16610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS16610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS16610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS16610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS16610 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS16610 IPR005467 Histidine kinase domain DOE60_RS16615 IPR025262 Quorum-sensing regulator protein G DOE60_RS16620 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS16620 IPR011006 CheY-like superfamily DOE60_RS16620 IPR003593 AAA+ ATPase domain DOE60_RS16620 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS16620 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS16620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS16620 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS16620 IPR009057 Homeobox-like domain superfamily DOE60_RS16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16625 IPR002187 Nitrogen regulatory protein PII DOE60_RS16625 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE60_RS16625 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE60_RS16625 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOE60_RS16625 IPR017918 Nitrogen regulatory protein PII, conserved site DOE60_RS16630 IPR036259 MFS transporter superfamily DOE60_RS16630 IPR000109 Proton-dependent oligopeptide transporter family DOE60_RS16630 IPR020846 Major facilitator superfamily domain DOE60_RS16630 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE60_RS16630 IPR005279 Dipeptide/tripeptide permease DOE60_RS16635 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE60_RS16635 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE60_RS16635 IPR011193 Ornithine/lysine/arginine decarboxylase DOE60_RS16635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS16635 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS16635 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE60_RS16635 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE60_RS16635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS16640 IPR004754 Amino acid antiporter DOE60_RS16640 IPR002293 Amino acid/polyamine transporter I DOE60_RS16645 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS16645 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS16645 IPR040970 CadC C-terminal domain 1 DOE60_RS16645 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS16645 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16645 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS16650 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS16650 IPR023950 Flavohemoprotein DOE60_RS16650 IPR012292 Globin/Protoglobin DOE60_RS16650 IPR009050 Globin-like superfamily DOE60_RS16650 IPR000971 Globin DOE60_RS16650 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS16650 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS16650 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS16650 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE60_RS16655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS16655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS16655 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS16655 IPR001085 Serine hydroxymethyltransferase DOE60_RS16655 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DOE60_RS16655 IPR039429 Serine hydroxymethyltransferase-like domain DOE60_RS16660 IPR024989 Major facilitator superfamily associated domain DOE60_RS16660 IPR036259 MFS transporter superfamily DOE60_RS16660 IPR026032 Probable 3-phenylpropionic acid transporter DOE60_RS16665 IPR011608 PRD domain DOE60_RS16665 IPR036634 PRD domain superfamily DOE60_RS16675 IPR011541 Nickel/cobalt transporter, high-affinity DOE60_RS16680 IPR014261 Sulphite reductase, subunit C DOE60_RS16680 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE60_RS16680 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE60_RS16680 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS16680 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE60_RS16680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS16680 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE60_RS16685 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit DOE60_RS16685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE60_RS16685 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE60_RS16685 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain DOE60_RS16685 IPR014260 Sulphite reductase, subunit B DOE60_RS16685 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE60_RS16685 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS16690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS16690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS16690 IPR009051 Alpha-helical ferredoxin DOE60_RS16690 IPR014259 Sulphite reductase, subunit A DOE60_RS16695 IPR022742 Serine aminopeptidase, S33 DOE60_RS16695 IPR029058 Alpha/Beta hydrolase fold DOE60_RS16700 IPR022337 Inositol monophosphatase, SuhB DOE60_RS16700 IPR033942 Inositol monophosphatase DOE60_RS16700 IPR020583 Inositol monophosphatase, metal-binding site DOE60_RS16700 IPR000760 Inositol monophosphatase-like DOE60_RS16700 IPR020550 Inositol monophosphatase, conserved site DOE60_RS16705 IPR029028 Alpha/beta knot methyltransferases DOE60_RS16705 IPR004384 RNA methyltransferase TrmJ/LasT DOE60_RS16705 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE60_RS16705 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE60_RS16710 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS16710 IPR030489 Transcription regulator Rrf2-type, conserved site DOE60_RS16710 IPR010242 Transcription factor HTH, IscR DOE60_RS16710 IPR000944 Transcription regulator Rrf2-type DOE60_RS16710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS16715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS16715 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS16715 IPR016454 Cysteine desulfurase DOE60_RS16715 IPR010240 Cysteine desulfurase IscS DOE60_RS16715 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE60_RS16715 IPR000192 Aminotransferase class V domain DOE60_RS16720 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DOE60_RS16720 IPR011339 ISC system FeS cluster assembly, IscU scaffold DOE60_RS16725 IPR011302 Iron-binding protein IscA, proteobacteria DOE60_RS16725 IPR016092 FeS cluster insertion protein DOE60_RS16725 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE60_RS16725 IPR035903 HesB-like domain superfamily DOE60_RS16725 IPR000361 FeS cluster biogenesis DOE60_RS16730 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain DOE60_RS16730 IPR001623 DnaJ domain DOE60_RS16730 IPR004640 Co-chaperone Hsc20 DOE60_RS16730 IPR036869 Chaperone J-domain superfamily DOE60_RS16730 IPR036386 HscB, C-terminal domain superfamily DOE60_RS16735 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DOE60_RS16735 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DOE60_RS16735 IPR013126 Heat shock protein 70 family DOE60_RS16735 IPR010236 ISC system FeS cluster assembly, HscA chaperone DOE60_RS16735 IPR042039 HscA chaperone, nucleotide-binding domain DOE60_RS16735 IPR018181 Heat shock protein 70, conserved site DOE60_RS16740 IPR012675 Beta-grasp domain superfamily DOE60_RS16740 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria DOE60_RS16740 IPR001055 Adrenodoxin DOE60_RS16740 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS16740 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS16740 IPR018298 Adrenodoxin, iron-sulphur binding site DOE60_RS16745 IPR007479 ISC system FeS cluster assembly, IscX DOE60_RS16745 IPR036762 IscX-like superfamily DOE60_RS16750 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOE60_RS16750 IPR008330 Peptidase M17, peptidase B DOE60_RS16750 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOE60_RS16750 IPR001346 Interferon regulatory factor DNA-binding domain DOE60_RS16755 IPR009839 SseB protein N-terminal domain DOE60_RS16755 IPR027945 SseB protein, C-terminal DOE60_RS16765 IPR001763 Rhodanese-like domain DOE60_RS16765 IPR001307 Thiosulphate sulfurtransferase, conserved site DOE60_RS16765 IPR036873 Rhodanese-like domain superfamily DOE60_RS16770 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain DOE60_RS16770 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOE60_RS16770 IPR002890 Macroglobulin domain DOE60_RS16770 IPR001599 Alpha-2-macroglobulin DOE60_RS16770 IPR011626 Alpha-macroglobulin-like, TED domain DOE60_RS16770 IPR021868 Alpha-2-macroglobulin MG3 domain DOE60_RS16770 IPR040639 Alpha-2-macroglobulin, MG1 domain DOE60_RS16770 IPR011625 Alpha-2-macroglobulin, bait region domain DOE60_RS16770 IPR026284 Alpha-2-macroglobulin, bacteria DOE60_RS16770 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain DOE60_RS16770 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain DOE60_RS16775 IPR001264 Glycosyl transferase, family 51 DOE60_RS16775 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS16775 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS16775 IPR009647 Penicillin-binding, C-terminal DOE60_RS16775 IPR011815 Penicillin-binding protein 1C DOE60_RS16775 IPR023346 Lysozyme-like domain superfamily DOE60_RS16775 IPR036950 Penicillin binding protein transglycosylase domain DOE60_RS16780 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS16780 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE60_RS16780 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS16780 IPR006656 Molybdopterin oxidoreductase DOE60_RS16780 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS16780 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS16780 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS16780 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS16780 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS16785 IPR014297 Dimethylsulphoxide reductase, chain B DOE60_RS16785 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS16785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS16805 IPR013785 Aldolase-type TIM barrel DOE60_RS16805 IPR040072 Methyltransferase (Class A) DOE60_RS16805 IPR027492 Dual-specificity RNA methyltransferase RlmN DOE60_RS16805 IPR007197 Radical SAM DOE60_RS16805 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DOE60_RS16815 IPR001387 Cro/C1-type helix-turn-helix domain DOE60_RS16815 IPR023690 Cytoskeleton protein RodZ DOE60_RS16815 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS16815 IPR025194 Domain of unknown function DUF4115 DOE60_RS16820 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DOE60_RS16820 IPR011005 Dihydropteroate synthase-like DOE60_RS16820 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DOE60_RS16825 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS16825 IPR004154 Anticodon-binding DOE60_RS16825 IPR036621 Anticodon-binding domain superfamily DOE60_RS16825 IPR015807 Histidine-tRNA ligase DOE60_RS16825 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DOE60_RS16825 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DOE60_RS16825 IPR033656 Histidyl-anticodon-binding DOE60_RS16830 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS16830 IPR018704 Tetratricopeptide repeat-like domain DOE60_RS16830 IPR026039 Uncharacterised protein family UPF0070 DOE60_RS16835 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOE60_RS16835 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE60_RS16835 IPR017687 Outer membrane protein assembly factor BamB DOE60_RS16835 IPR002372 Pyrrolo-quinoline quinone repeat DOE60_RS16835 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOE60_RS16840 IPR005225 Small GTP-binding protein domain DOE60_RS16840 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16840 IPR015946 K homology domain-like, alpha/beta DOE60_RS16840 IPR032859 GTPase Der, C-terminal KH-domain-like DOE60_RS16840 IPR006073 GTP binding domain DOE60_RS16840 IPR016484 GTP-binding protein EngA DOE60_RS16840 IPR031166 EngA-type guanine nucleotide-binding (G) domain DOE60_RS16845 IPR029037 YfgJ-like DOE60_RS16845 IPR010807 Protein of unknown function DUF1407 DOE60_RS16850 IPR003535 Intimin/invasin bacterial adhesion mediator protein DOE60_RS16850 IPR022409 PKD/Chitinase domain DOE60_RS16850 IPR015217 Invasin, domain 3 DOE60_RS16850 IPR018392 LysM domain DOE60_RS16850 IPR003344 Big-1 (bacterial Ig-like domain 1) domain DOE60_RS16850 IPR013783 Immunoglobulin-like fold DOE60_RS16850 IPR008964 Invasin/intimin cell-adhesion fragments DOE60_RS16850 IPR038177 Inverse autotransporter, beta-domain superfamily DOE60_RS16850 IPR024519 Inverse autotransporter, beta-domain DOE60_RS16870 IPR032475 Protealysin, N-terminal propeptide DOE60_RS16870 IPR013856 Peptidase M4 domain DOE60_RS16870 IPR027268 Peptidase M4/M1, CTD superfamily DOE60_RS16870 IPR023612 Peptidase M4 DOE60_RS16870 IPR001570 Peptidase M4, C-terminal DOE60_RS16875 IPR003753 Exonuclease VII, large subunit DOE60_RS16875 IPR020579 Exonuclease VII, large subunit, C-terminal DOE60_RS16875 IPR025824 OB-fold nucleic acid binding domain DOE60_RS16880 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOE60_RS16880 IPR005990 Inosine-5'-monophosphate dehydrogenase DOE60_RS16880 IPR000644 CBS domain DOE60_RS16880 IPR013785 Aldolase-type TIM barrel DOE60_RS16880 IPR001093 IMP dehydrogenase/GMP reductase DOE60_RS16885 IPR017926 Glutamine amidotransferase DOE60_RS16885 IPR001674 GMP synthase, C-terminal DOE60_RS16885 IPR004739 GMP synthase, glutamine amidotransferase DOE60_RS16885 IPR025777 GMP synthetase ATP pyrophosphatase domain DOE60_RS16885 IPR022955 GMP synthase DOE60_RS16885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS16885 IPR029062 Class I glutamine amidotransferase-like DOE60_RS16885 IPR022310 NAD/GMP synthase DOE60_RS16890 IPR000847 Transcription regulator HTH, LysR DOE60_RS16890 IPR005119 LysR, substrate-binding DOE60_RS16890 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS16890 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS16895 IPR013785 Aldolase-type TIM barrel DOE60_RS16895 IPR004136 Nitronate monooxygenase DOE60_RS16910 IPR022576 Protein of unknown function DUF2633 DOE60_RS16920 IPR007895 MASE1 DOE60_RS16920 IPR001633 EAL domain DOE60_RS16920 IPR035919 EAL domain superfamily DOE60_RS16920 IPR000160 GGDEF domain DOE60_RS16925 IPR022371 Exopolyphosphatase DOE60_RS16925 IPR030673 Pyrophosphatase, GppA/Ppx-type DOE60_RS16925 IPR003695 Ppx/GppA phosphatase DOE60_RS16930 IPR001736 Phospholipase D/Transphosphatidylase DOE60_RS16930 IPR003414 Polyphosphate kinase DOE60_RS16930 IPR041108 Polyphosphate kinase, C-terminal domain 1 DOE60_RS16930 IPR024953 Polyphosphate kinase middle domain DOE60_RS16930 IPR036830 Polyphosphate kinase middle domain superfamily DOE60_RS16930 IPR025200 Polyphosphate kinase C-terminal domain 2 DOE60_RS16930 IPR025198 Polyphosphate kinase N-terminal domain DOE60_RS16930 IPR036832 Polyphosphate kinase N-terminal domain superfamily DOE60_RS16935 IPR004607 Phosphoribosylglycinamide formyltransferase DOE60_RS16935 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOE60_RS16935 IPR002376 Formyl transferase, N-terminal DOE60_RS16935 IPR036477 Formyl transferase, N-terminal domain superfamily DOE60_RS16940 IPR036676 PurM-like, C-terminal domain superfamily DOE60_RS16940 IPR036921 PurM-like, N-terminal domain superfamily DOE60_RS16940 IPR016188 PurM-like, N-terminal domain DOE60_RS16940 IPR010918 PurM-like, C-terminal domain DOE60_RS16940 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DOE60_RS16945 IPR000836 Phosphoribosyltransferase domain DOE60_RS16945 IPR005765 Uracil phosphoribosyl transferase DOE60_RS16945 IPR034332 Uracil phosphoribosyltransferase, bacterial-type DOE60_RS16945 IPR029057 Phosphoribosyltransferase-like DOE60_RS16955 IPR006042 Xanthine/uracil permease DOE60_RS16955 IPR029935 Uracil permease DOE60_RS16955 IPR006043 Xanthine/uracil/vitamin C permease DOE60_RS16960 IPR020591 Chromosomal replication control, initiator DnaA-like DOE60_RS16960 IPR013317 Chromosomal replication initiator protein DnaA DOE60_RS16960 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae DOE60_RS16960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS16960 IPR017788 DnaA regulatory inactivator Hda DOE60_RS16965 IPR036249 Thioredoxin-like superfamily DOE60_RS16965 IPR006660 Arsenate reductase-like DOE60_RS16965 IPR006659 Arsenate reductase DOE60_RS16970 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS16970 IPR030873 Beta-barrel assembly-enhancing protease DOE60_RS16970 IPR001915 Peptidase M48 DOE60_RS16975 IPR002549 Transmembrane protein TqsA-like DOE60_RS16980 IPR025736 PucR C-terminal helix-turn-helix domain DOE60_RS16980 IPR008599 Putative sugar diacid recognition DOE60_RS16980 IPR041522 CdaR, GGDEF-like domain DOE60_RS16980 IPR042070 PucR C-terminal helix-turn-helix domain superfamily DOE60_RS16985 IPR003474 Gluconate transporter DOE60_RS16990 IPR018193 Glycerate kinase, flavodoxin-like fold DOE60_RS16990 IPR004381 Glycerate kinase DOE60_RS16990 IPR036129 Glycerate kinase superfamily DOE60_RS16990 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE60_RS16995 IPR036249 Thioredoxin-like superfamily DOE60_RS16995 IPR013766 Thioredoxin domain DOE60_RS16995 IPR024706 Peroxiredoxin, AhpC-type DOE60_RS16995 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE60_RS17000 IPR016867 Glycine cleavage system transcriptional repressor DOE60_RS17000 IPR002912 ACT domain DOE60_RS17005 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DOE60_RS17005 IPR013785 Aldolase-type TIM barrel DOE60_RS17005 IPR002220 DapA-like DOE60_RS17005 IPR020624 Schiff base-forming aldolase, conserved site DOE60_RS17005 IPR020625 Schiff base-forming aldolase, active site DOE60_RS17010 IPR014524 Outer membrane protein assembly factor BamC DOE60_RS17010 IPR042268 Outer membrane protein assembly factor BamC, C-terminal DOE60_RS17010 IPR010653 NlpB/DapX lipoprotein DOE60_RS17015 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DOE60_RS17015 IPR018236 SAICAR synthetase, conserved site DOE60_RS17015 IPR028923 SAICAR synthetase/ADE2, N-terminal DOE60_RS17015 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase DOE60_RS17020 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative DOE60_RS17025 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS17025 IPR000182 GNAT domain DOE60_RS17025 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA DOE60_RS17025 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain DOE60_RS17025 IPR007807 Helicase domain DOE60_RS17025 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal DOE60_RS17025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17025 IPR032672 TmcA/NAT10/Kre33 DOE60_RS17025 IPR038321 TmcA, C-terminal domain superfamily DOE60_RS17030 IPR020910 Uncharacterised protein family UPF0370 DOE60_RS17035 IPR011650 Peptidase M20, dimerisation domain DOE60_RS17035 IPR002933 Peptidase M20 DOE60_RS17035 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DOE60_RS17035 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE60_RS17035 IPR036264 Bacterial exopeptidase dimerisation domain DOE60_RS17040 IPR036249 Thioredoxin-like superfamily DOE60_RS17040 IPR006660 Arsenate reductase-like DOE60_RS17040 IPR006504 Transcriptional regulator Spx/MgsR DOE60_RS17050 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS17050 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE60_RS17050 IPR001036 Acriflavin resistance protein DOE60_RS17055 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing DOE60_RS17055 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE60_RS17055 IPR003660 HAMP domain DOE60_RS17055 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS17055 IPR042295 NarX-like, N-terminal domain superfamily DOE60_RS17055 IPR029095 NarX-like, N-terminal DOE60_RS17055 IPR005467 Histidine kinase domain DOE60_RS17055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS17065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS17065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS17065 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DOE60_RS17065 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS17065 IPR023753 FAD/NAD(P)-binding domain DOE60_RS17065 IPR028261 Dihydroprymidine dehydrogenase domain II DOE60_RS17065 IPR009051 Alpha-helical ferredoxin DOE60_RS17070 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS17070 IPR001466 Beta-lactamase-related DOE60_RS17070 IPR022849 Peptidase S12, YfeW/YbbE-like DOE60_RS17075 IPR000086 NUDIX hydrolase domain DOE60_RS17075 IPR004385 Nucleoside diphosphate pyrophosphatase DOE60_RS17075 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS17080 IPR009560 Protein of unknown function DUF1176 DOE60_RS17090 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS17090 IPR005475 Transketolase-like, pyrimidine-binding domain DOE60_RS17090 IPR005478 Transketolase, bacterial-like DOE60_RS17090 IPR020826 Transketolase binding site DOE60_RS17090 IPR033248 Transketolase, C-terminal domain DOE60_RS17090 IPR005474 Transketolase, N-terminal DOE60_RS17090 IPR029061 Thiamin diphosphate-binding fold DOE60_RS17090 IPR033247 Transketolase family DOE60_RS17095 IPR004730 Transaldolase type 1 DOE60_RS17095 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE60_RS17095 IPR018225 Transaldolase, active site DOE60_RS17095 IPR013785 Aldolase-type TIM barrel DOE60_RS17105 IPR012301 Malic enzyme, N-terminal domain DOE60_RS17105 IPR042113 Phosphate acetyltransferase, domain 1 DOE60_RS17105 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17105 IPR012188 NAD(P)-dependent malic enzyme DOE60_RS17105 IPR012302 Malic enzyme, NAD-binding DOE60_RS17105 IPR042112 Phosphate acetyltransferase, domain 2 DOE60_RS17105 IPR002505 Phosphate acetyl/butaryl transferase DOE60_RS17105 IPR015884 Malic enzyme, conserved site DOE60_RS17105 IPR037062 Malic enzyme, N-terminal domain superfamily DOE60_RS17110 IPR000917 Sulfatase, N-terminal DOE60_RS17110 IPR024607 Sulfatase, conserved site DOE60_RS17110 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS17115 IPR007197 Radical SAM DOE60_RS17115 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE60_RS17115 IPR013785 Aldolase-type TIM barrel DOE60_RS17115 IPR023885 4Fe4S-binding SPASM domain DOE60_RS17120 IPR009307 Ethanolamine utilisation EutS DOE60_RS17120 IPR000249 Microcompartment protein, bacteria DOE60_RS17120 IPR037233 CcmK-like superfamily DOE60_RS17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17125 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV DOE60_RS17130 IPR011051 RmlC-like cupin domain superfamily DOE60_RS17130 IPR014710 RmlC-like jelly roll fold DOE60_RS17130 IPR010424 Ethanolamine utilisation EutQ DOE60_RS17135 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type DOE60_RS17135 IPR016030 Cobalamin adenosyltransferase-like DOE60_RS17135 IPR036451 Cobalamin adenosyltransferase-like superfamily DOE60_RS17140 IPR002505 Phosphate acetyl/butaryl transferase DOE60_RS17140 IPR004614 Phosphate acetyltransferase DOE60_RS17140 IPR012147 Phosphate acetyl/butyryltransferase DOE60_RS17140 IPR042113 Phosphate acetyltransferase, domain 1 DOE60_RS17140 IPR042112 Phosphate acetyltransferase, domain 2 DOE60_RS17145 IPR020808 Bacterial microcompartments protein, conserved site DOE60_RS17145 IPR037233 CcmK-like superfamily DOE60_RS17145 IPR000249 Microcompartment protein, bacteria DOE60_RS17150 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml DOE60_RS17150 IPR036677 EutN/Ccml superfamily DOE60_RS17155 IPR015590 Aldehyde dehydrogenase domain DOE60_RS17155 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS17155 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related DOE60_RS17155 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS17155 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS17165 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS17165 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS17165 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS17170 IPR007441 Ethanolamine utilisation protein EutH DOE60_RS17175 IPR009377 Ethanolamine utilisation EutA DOE60_RS17180 IPR013785 Aldolase-type TIM barrel DOE60_RS17180 IPR010628 Ethanolamine ammonia lyase large subunit DOE60_RS17185 IPR009246 Ethanolamine ammonia-lyase light chain DOE60_RS17185 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal DOE60_RS17185 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal DOE60_RS17190 IPR009193 Polyhedral organelle shell protein, EutL/PduB type DOE60_RS17190 IPR037233 CcmK-like superfamily DOE60_RS17190 IPR000249 Microcompartment protein, bacteria DOE60_RS17190 IPR030983 Ethanolamine utilization protein EutL DOE60_RS17195 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS17195 IPR000249 Microcompartment protein, bacteria DOE60_RS17195 IPR032298 Ethanolamine utilization protein EutK, C-terminal DOE60_RS17195 IPR037233 CcmK-like superfamily DOE60_RS17195 IPR020808 Bacterial microcompartments protein, conserved site DOE60_RS17200 IPR009057 Homeobox-like domain superfamily DOE60_RS17200 IPR018062 HTH domain AraC-type, conserved site DOE60_RS17200 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS17205 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily DOE60_RS17205 IPR018375 Coproporphyrinogen III oxidase, conserved site DOE60_RS17205 IPR001260 Coproporphyrinogen III oxidase, aerobic DOE60_RS17210 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE60_RS17215 IPR000182 GNAT domain DOE60_RS17215 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS17215 IPR023072 Acetyltransferase, YpeA DOE60_RS17215 IPR017255 Acetyltransferase, GNAT, predicted DOE60_RS17220 IPR021318 Protein of unknown function DUF2919 DOE60_RS17225 IPR038714 YfeY-like superfamily DOE60_RS17225 IPR010938 Protein of unknown function DUF1131 DOE60_RS17230 IPR011008 Dimeric alpha-beta barrel DOE60_RS17230 IPR006314 Dyp-type peroxidase DOE60_RS17235 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS17235 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17240 IPR005669 Thiosulphate/Sulfate-binding protein DOE60_RS17240 IPR034408 Sulphate/thiosulphate-binding site DOE60_RS17240 IPR000957 Sulphate/thiosulphate-binding, conserved site DOE60_RS17245 IPR005667 Sulphate ABC transporter permease protein 2 DOE60_RS17245 IPR035906 MetI-like superfamily DOE60_RS17245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS17245 IPR011865 Sulphate ABC transporter, permease protein CysT DOE60_RS17250 IPR005667 Sulphate ABC transporter permease protein 2 DOE60_RS17250 IPR035906 MetI-like superfamily DOE60_RS17250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS17250 IPR011866 Sulphate ABC transporter, permease protein CysW DOE60_RS17255 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DOE60_RS17255 IPR003439 ABC transporter-like DOE60_RS17255 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS17255 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17255 IPR005666 Sulphate transport system permease protein 1 DOE60_RS17255 IPR017871 ABC transporter, conserved site DOE60_RS17255 IPR003593 AAA+ ATPase domain DOE60_RS17260 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS17260 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS17260 IPR005856 Cysteine synthase DOE60_RS17260 IPR005858 Cysteine synthase CysM DOE60_RS17260 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DOE60_RS17265 IPR035242 Protein of unknown function DUF5329 DOE60_RS17270 IPR017926 Glutamine amidotransferase DOE60_RS17270 IPR029062 Class I glutamine amidotransferase-like DOE60_RS17275 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS17275 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS17275 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS17275 IPR000524 Transcription regulator HTH, GntR DOE60_RS17275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS17275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS17275 IPR004839 Aminotransferase, class I/classII DOE60_RS17280 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase DOE60_RS17280 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE60_RS17280 IPR004625 Pyridoxine kinase DOE60_RS17280 IPR029056 Ribokinase-like DOE60_RS17290 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 DOE60_RS17290 IPR011055 Duplicated hybrid motif DOE60_RS17295 IPR018274 PEP-utilising enzyme, active site DOE60_RS17295 IPR000121 PEP-utilising enzyme, C-terminal DOE60_RS17295 IPR023151 PEP-utilising enzyme, conserved site DOE60_RS17295 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE60_RS17295 IPR036637 Phosphohistidine domain superfamily DOE60_RS17295 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS17295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS17295 IPR036618 PtsI, HPr-binding domain superfamily DOE60_RS17295 IPR006318 Phosphotransferase system, enzyme I-like DOE60_RS17295 IPR008279 PEP-utilising enzyme, mobile domain DOE60_RS17295 IPR024692 Phosphotransferase system, enzyme I DOE60_RS17300 IPR000032 Phosphocarrier protein HPr-like DOE60_RS17300 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE60_RS17300 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE60_RS17300 IPR035895 HPr-like superfamily DOE60_RS17305 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS17305 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS17305 IPR005856 Cysteine synthase DOE60_RS17305 IPR005859 Cysteine synthase CysK DOE60_RS17305 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DOE60_RS17310 IPR022985 Sulfate transporter CysZ DOE60_RS17315 IPR007449 ZipA, C-terminal FtsZ-binding domain DOE60_RS17315 IPR011919 Cell division protein ZipA DOE60_RS17315 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily DOE60_RS17320 IPR010994 RuvA domain 2-like DOE60_RS17320 IPR004150 NAD-dependent DNA ligase, OB-fold DOE60_RS17320 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS17320 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE60_RS17320 IPR013840 NAD-dependent DNA ligase, N-terminal DOE60_RS17320 IPR013839 NAD-dependent DNA ligase, adenylation DOE60_RS17320 IPR001679 NAD-dependent DNA ligase DOE60_RS17320 IPR001357 BRCT domain DOE60_RS17320 IPR033136 NAD-dependent DNA ligase, conserved site DOE60_RS17320 IPR018239 NAD-dependent DNA ligase, active site DOE60_RS17320 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type DOE60_RS17320 IPR036420 BRCT domain superfamily DOE60_RS17320 IPR041663 DisA/LigA, helix-hairpin-helix motif DOE60_RS17325 IPR024530 Putative quorum-sensing-regulated virulence factor DOE60_RS17330 IPR038770 Sodium/solute symporter superfamily DOE60_RS17330 IPR016833 Putative sodium bile acid cotransporter DOE60_RS17335 IPR005119 LysR, substrate-binding DOE60_RS17335 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS17335 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS17335 IPR000847 Transcription regulator HTH, LysR DOE60_RS17345 IPR006530 YD repeat DOE60_RS17345 IPR031325 RHS repeat DOE60_RS17345 IPR022385 Rhs repeat-associated core DOE60_RS17345 IPR001826 RHS protein DOE60_RS17365 IPR031325 RHS repeat DOE60_RS17365 IPR022385 Rhs repeat-associated core DOE60_RS17365 IPR025479 Domain of unknown function DUF4329 DOE60_RS17365 IPR006530 YD repeat DOE60_RS17365 IPR001826 RHS protein DOE60_RS17410 IPR025166 Integrase, DNA-binding domain DOE60_RS17410 IPR038488 Integrase, DNA-binding domain superfamily DOE60_RS17410 IPR002104 Integrase, catalytic domain DOE60_RS17410 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS17410 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS17410 IPR010998 Integrase/recombinase, N-terminal DOE60_RS17435 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DOE60_RS17435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS17435 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE60_RS17435 IPR033910 Glutamyl-tRNA synthetase DOE60_RS17435 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS17435 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DOE60_RS17435 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DOE60_RS17435 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE60_RS17440 IPR009061 Putative DNA-binding domain superfamily DOE60_RS17440 IPR001387 Cro/C1-type helix-turn-helix domain DOE60_RS17440 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS17440 IPR010749 Protein of unknown function DUF1323 DOE60_RS17445 IPR009061 Putative DNA-binding domain superfamily DOE60_RS17445 IPR010749 Protein of unknown function DUF1323 DOE60_RS17465 IPR029787 Nucleotide cyclase DOE60_RS17465 IPR007895 MASE1 DOE60_RS17465 IPR035919 EAL domain superfamily DOE60_RS17465 IPR000160 GGDEF domain DOE60_RS17465 IPR001633 EAL domain DOE60_RS17470 IPR008276 Concentrative nucleoside transporter DOE60_RS17470 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE60_RS17470 IPR002668 Concentrative nucleoside transporter N-terminal domain DOE60_RS17470 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial DOE60_RS17470 IPR011657 Concentrative nucleoside transporter C-terminal domain DOE60_RS17475 IPR001046 NRAMP family DOE60_RS17480 IPR019638 Protein of unknown function DUF2502 DOE60_RS17485 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS17485 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS17490 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS17490 IPR029061 Thiamin diphosphate-binding fold DOE60_RS17490 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae DOE60_RS17490 IPR000399 TPP-binding enzyme, conserved site DOE60_RS17490 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme DOE60_RS17490 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS17490 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS17490 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE60_RS17495 IPR001807 Chloride channel, voltage gated DOE60_RS17495 IPR014743 Chloride channel, core DOE60_RS17495 IPR022969 Chloride channel YfeO DOE60_RS17500 IPR003836 Glucokinase DOE60_RS17505 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS17505 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS17505 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE60_RS17505 IPR036095 PTS system IIB component-like superfamily DOE60_RS17510 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS17510 IPR003352 Phosphotransferase system, EIIC DOE60_RS17515 IPR000994 Peptidase M24 DOE60_RS17515 IPR000587 Creatinase, N-terminal DOE60_RS17515 IPR036005 Creatinase/aminopeptidase-like DOE60_RS17515 IPR001714 Peptidase M24, methionine aminopeptidase DOE60_RS17515 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE60_RS17520 IPR023367 Peptidase M42, domain 2 DOE60_RS17520 IPR008007 Peptidase M42 DOE60_RS17525 IPR036637 Phosphohistidine domain superfamily DOE60_RS17525 IPR004715 Phosphotransferase system, IIA component fructose subfamily DOE60_RS17525 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE60_RS17525 IPR035895 HPr-like superfamily DOE60_RS17525 IPR023151 PEP-utilising enzyme, conserved site DOE60_RS17525 IPR008279 PEP-utilising enzyme, mobile domain DOE60_RS17525 IPR000121 PEP-utilising enzyme, C-terminal DOE60_RS17525 IPR006318 Phosphotransferase system, enzyme I-like DOE60_RS17525 IPR016152 Phosphotransferase/anion transporter DOE60_RS17525 IPR036618 PtsI, HPr-binding domain superfamily DOE60_RS17525 IPR002178 PTS EIIA type-2 domain DOE60_RS17525 IPR000032 Phosphocarrier protein HPr-like DOE60_RS17525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS17525 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS17530 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS17530 IPR018062 HTH domain AraC-type, conserved site DOE60_RS17530 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS17530 IPR009057 Homeobox-like domain superfamily DOE60_RS17535 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS17535 IPR004839 Aminotransferase, class I/classII DOE60_RS17535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS17535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS17545 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE60_RS17545 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOE60_RS17545 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP DOE60_RS17555 IPR024470 Protein of unknown function DUF2545 DOE60_RS17560 IPR005267 Glycerol-3-phosphate transporter DOE60_RS17560 IPR011701 Major facilitator superfamily DOE60_RS17560 IPR020846 Major facilitator superfamily domain DOE60_RS17560 IPR036259 MFS transporter superfamily DOE60_RS17560 IPR000849 Sugar phosphate transporter DOE60_RS17560 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE60_RS17575 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS17575 IPR005467 Histidine kinase domain DOE60_RS17575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS17575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS17575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS17575 IPR003660 HAMP domain DOE60_RS17575 IPR017116 Signal transduction histidine kinase, PgtB DOE60_RS17580 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS17580 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS17580 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS17580 IPR011006 CheY-like superfamily DOE60_RS17580 IPR009057 Homeobox-like domain superfamily DOE60_RS17580 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS17580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17585 IPR000036 Peptidase A26, omptin DOE60_RS17585 IPR020080 Outer membrane adhesin/peptidase omptin DOE60_RS17585 IPR020079 Peptidase A26, omptin, conserved site DOE60_RS17595 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DOE60_RS17595 IPR036165 YefM-like superfamily DOE60_RS17610 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE60_RS17610 IPR013762 Integrase-like, catalytic domain superfamily DOE60_RS17610 IPR010998 Integrase/recombinase, N-terminal DOE60_RS17610 IPR025166 Integrase, DNA-binding domain DOE60_RS17610 IPR038488 Integrase, DNA-binding domain superfamily DOE60_RS17610 IPR002104 Integrase, catalytic domain DOE60_RS17620 IPR023271 Aquaporin-like DOE60_RS17620 IPR000292 Formate/nitrite transporter DOE60_RS17625 IPR007428 MlaA lipoprotein DOE60_RS17630 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DOE60_RS17630 IPR042117 OMPP1/FadL/TodX superfamily DOE60_RS17635 IPR035571 UPF0234-like, C-terminal DOE60_RS17635 IPR005272 Conserved hypothetical protein CHP00743 DOE60_RS17640 IPR020613 Thiolase, conserved site DOE60_RS17640 IPR020617 Thiolase, C-terminal DOE60_RS17640 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE60_RS17640 IPR020616 Thiolase, N-terminal DOE60_RS17640 IPR012806 Acetyl-CoA C-acyltransferase FadI DOE60_RS17640 IPR002155 Thiolase DOE60_RS17640 IPR016039 Thiolase-like DOE60_RS17640 IPR020610 Thiolase, active site DOE60_RS17645 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOE60_RS17645 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DOE60_RS17645 IPR001753 Enoyl-CoA hydratase/isomerase DOE60_RS17645 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS17645 IPR012802 Fatty oxidation complex, alpha subunit FadJ DOE60_RS17645 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS17645 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOE60_RS17650 IPR004449 Phosphohistidine phosphatase SixA DOE60_RS17650 IPR013078 Histidine phosphatase superfamily, clade-1 DOE60_RS17650 IPR029033 Histidine phosphatase superfamily DOE60_RS17655 IPR022990 Uncharacterised protein family UPF0115 DOE60_RS17655 IPR002625 Smr domain DOE60_RS17655 IPR036063 Smr domain superfamily DOE60_RS17660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS17660 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase DOE60_RS17660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS17660 IPR004556 Methyltransferase HemK-like DOE60_RS17660 IPR007848 Methyltransferase small domain DOE60_RS17665 IPR000453 Chorismate synthase DOE60_RS17665 IPR035904 Chorismate synthase AroC superfamily DOE60_RS17665 IPR020541 Chorismate synthase, conserved site DOE60_RS17670 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase DOE60_RS17670 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE60_RS17680 IPR007411 Elongation factor P hydroxylase DOE60_RS17685 IPR014987 Uncharacterised protein family YfcL DOE60_RS17690 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS17690 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DOE60_RS17690 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DOE60_RS17690 IPR008471 MnmC-like methyltransferase DOE60_RS17690 IPR006076 FAD dependent oxidoreductase DOE60_RS17695 IPR000794 Beta-ketoacyl synthase DOE60_RS17695 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOE60_RS17695 IPR016039 Thiolase-like DOE60_RS17695 IPR018201 Beta-ketoacyl synthase, active site DOE60_RS17695 IPR014030 Beta-ketoacyl synthase, N-terminal DOE60_RS17695 IPR014031 Beta-ketoacyl synthase, C-terminal DOE60_RS17710 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DOE60_RS17710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS17720 IPR037541 Uncharacterized MFS-type transporter YfcJ DOE60_RS17720 IPR020846 Major facilitator superfamily domain DOE60_RS17720 IPR011701 Major facilitator superfamily DOE60_RS17720 IPR036259 MFS transporter superfamily DOE60_RS17725 IPR023597 Flagellar regulator Flk DOE60_RS17730 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE60_RS17730 IPR038251 PdxB, dimerisation domain superfamily DOE60_RS17730 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17730 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain DOE60_RS17730 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE60_RS17730 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE60_RS17730 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE60_RS17730 IPR020921 Erythronate-4-phosphate dehydrogenase DOE60_RS17735 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE60_RS17735 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17735 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE60_RS17740 IPR020095 Pseudouridine synthase I, TruA, C-terminal DOE60_RS17740 IPR001406 Pseudouridine synthase I, TruA DOE60_RS17740 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DOE60_RS17740 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS17745 IPR032816 SNARE associated Golgi protein DOE60_RS17745 IPR032818 DedA family DOE60_RS17750 IPR041010 Acetyl-coA carboxylase zinc finger domain DOE60_RS17750 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOE60_RS17750 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS17750 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit DOE60_RS17750 IPR034733 Acetyl-CoA carboxylase DOE60_RS17755 IPR018109 Folylpolyglutamate synthetase, conserved site DOE60_RS17755 IPR036565 Mur-like, catalytic domain superfamily DOE60_RS17755 IPR004101 Mur ligase, C-terminal DOE60_RS17755 IPR036615 Mur ligase, C-terminal domain superfamily DOE60_RS17755 IPR013221 Mur ligase, central DOE60_RS17755 IPR001645 Folylpolyglutamate synthetase DOE60_RS17760 IPR032898 Cell division protein DedD DOE60_RS17760 IPR036680 Sporulation-like domain superfamily DOE60_RS17760 IPR007730 Sporulation-like domain DOE60_RS17765 IPR003825 Colicin V production, CvpA DOE60_RS17770 IPR000836 Phosphoribosyltransferase domain DOE60_RS17770 IPR035584 Amidophosphoribosyltransferase, N-terminal DOE60_RS17770 IPR017932 Glutamine amidotransferase type 2 domain DOE60_RS17770 IPR005854 Amidophosphoribosyltransferase DOE60_RS17770 IPR029057 Phosphoribosyltransferase-like DOE60_RS17770 IPR029055 Nucleophile aminohydrolases, N-terminal DOE60_RS17775 IPR035965 PAS domain superfamily DOE60_RS17775 IPR000014 PAS domain DOE60_RS17775 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS17775 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS17775 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17775 IPR009057 Homeobox-like domain superfamily DOE60_RS17775 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS17775 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS17775 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS17775 IPR003593 AAA+ ATPase domain DOE60_RS17780 IPR000183 Ornithine/DAP/Arg decarboxylase DOE60_RS17780 IPR029066 PLP-binding barrel DOE60_RS17780 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE60_RS17780 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DOE60_RS17780 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE60_RS17785 IPR002293 Amino acid/polyamine transporter I DOE60_RS17790 IPR029066 PLP-binding barrel DOE60_RS17790 IPR001608 Alanine racemase, N-terminal DOE60_RS17795 IPR004840 Amino acid permease, conserved site DOE60_RS17795 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS17800 IPR036551 Flavin prenyltransferase-like DOE60_RS17800 IPR003382 Flavoprotein DOE60_RS17800 IPR004507 Flavin prenyltransferase UbiX-like DOE60_RS17810 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS17810 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE60_RS17810 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS17815 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS17815 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS17815 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE60_RS17820 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS17820 IPR035906 MetI-like superfamily DOE60_RS17820 IPR030199 Histidine transport system permease protein HisQ DOE60_RS17820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS17825 IPR035906 MetI-like superfamily DOE60_RS17825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS17825 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS17830 IPR017871 ABC transporter, conserved site DOE60_RS17830 IPR003593 AAA+ ATPase domain DOE60_RS17830 IPR003439 ABC transporter-like DOE60_RS17830 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17830 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS17835 IPR010099 Epimerase family protein SDR39U1 DOE60_RS17835 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS17835 IPR036291 NAD(P)-binding domain superfamily DOE60_RS17835 IPR013549 Domain of unknown function DUF1731 DOE60_RS17845 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS17845 IPR036249 Thioredoxin-like superfamily DOE60_RS17845 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS17845 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS17845 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS17850 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS17850 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS17850 IPR040079 Glutathione Transferase family DOE60_RS17850 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS17850 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal DOE60_RS17850 IPR036249 Thioredoxin-like superfamily DOE60_RS17855 IPR020935 Phosphodiesterase YfcE, conserved site DOE60_RS17855 IPR041802 YfcE-like, metallophosphatase domain DOE60_RS17855 IPR029052 Metallo-dependent phosphatase-like DOE60_RS17855 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type DOE60_RS17855 IPR000979 Phosphodiesterase MJ0936/Vps29 DOE60_RS17860 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS17860 IPR000086 NUDIX hydrolase domain DOE60_RS17860 IPR024195 NUDIX hydrolase, YfcD, predicted DOE60_RS17865 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS17865 IPR028082 Periplasmic binding protein-like I DOE60_RS17865 IPR000843 LacI-type HTH domain DOE60_RS17875 IPR002178 PTS EIIA type-2 domain DOE60_RS17875 IPR016152 Phosphotransferase/anion transporter DOE60_RS17885 IPR004703 Phosphotransferase system, sugar-specific permease component DOE60_RS17890 IPR029061 Thiamin diphosphate-binding fold DOE60_RS17890 IPR005474 Transketolase, N-terminal DOE60_RS17895 IPR005477 Deoxyxylulose-5-phosphate synthase DOE60_RS17895 IPR029061 Thiamin diphosphate-binding fold DOE60_RS17895 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS17895 IPR005475 Transketolase-like, pyrimidine-binding domain DOE60_RS17895 IPR020826 Transketolase binding site DOE60_RS17895 IPR005474 Transketolase, N-terminal DOE60_RS17895 IPR033248 Transketolase, C-terminal domain DOE60_RS17900 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE60_RS17905 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE60_RS17905 IPR042113 Phosphate acetyltransferase, domain 1 DOE60_RS17905 IPR042112 Phosphate acetyltransferase, domain 2 DOE60_RS17905 IPR002505 Phosphate acetyl/butaryl transferase DOE60_RS17905 IPR010766 DRTGG DOE60_RS17905 IPR004614 Phosphate acetyltransferase DOE60_RS17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS17905 IPR016475 Phosphate acetyltransferase, bacteria DOE60_RS17910 IPR004372 Acetate/propionate kinase DOE60_RS17910 IPR000890 Aliphatic acid kinase, short-chain DOE60_RS17910 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE60_RS17915 IPR007334 Uncharacterised protein family UPF0208 DOE60_RS17920 IPR005587 Uncharacterised protein family UPF0304, YfbU DOE60_RS17920 IPR023145 YfbU, helix-hairpin domain superfamily DOE60_RS17920 IPR023146 YfbU, alpha-helical bundle domain superfamily DOE60_RS17925 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS17925 IPR036412 HAD-like superfamily DOE60_RS17925 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS17925 IPR006439 HAD hydrolase, subfamily IA DOE60_RS17925 IPR023214 HAD superfamily DOE60_RS17930 IPR031312 Sodium/sulphate symporter, conserved site DOE60_RS17930 IPR006037 Regulator of K+ conductance, C-terminal DOE60_RS17930 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE60_RS17930 IPR004680 Citrate transporter-like domain DOE60_RS17935 IPR039356 Metal-dependent nucleoside 5'-monophosphatase DOE60_RS17935 IPR003607 HD/PDEase domain DOE60_RS17935 IPR022971 5'-deoxynucleotidase YfbR DOE60_RS17940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS17940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS17940 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS17940 IPR004839 Aminotransferase, class I/classII DOE60_RS17950 IPR005119 LysR, substrate-binding DOE60_RS17950 IPR000847 Transcription regulator HTH, LysR DOE60_RS17950 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS17950 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS17960 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DOE60_RS17960 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DOE60_RS17960 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily DOE60_RS17965 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE60_RS17965 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DOE60_RS17970 IPR029014 [NiFe]-hydrogenase, large subunit DOE60_RS17970 IPR010218 NADH dehydrogenase, subunit C DOE60_RS17970 IPR001135 NADH-quinone oxidoreductase, subunit D DOE60_RS17970 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DOE60_RS17970 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DOE60_RS17970 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DOE60_RS17970 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DOE60_RS17970 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DOE60_RS17970 IPR023062 NADH dehydrogenase, subunit CD DOE60_RS17975 IPR036249 Thioredoxin-like superfamily DOE60_RS17975 IPR002023 NADH-quinone oxidoreductase subunit E-like DOE60_RS17975 IPR042128 NuoE domain DOE60_RS17975 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DOE60_RS17980 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DOE60_RS17980 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE60_RS17980 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE60_RS17980 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DOE60_RS17980 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DOE60_RS17980 IPR011537 NADH ubiquinone oxidoreductase, F subunit DOE60_RS17980 IPR019554 Soluble ligand binding domain DOE60_RS17985 IPR010228 NADH:ubiquinone oxidoreductase, subunit G DOE60_RS17985 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DOE60_RS17985 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS17985 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS17985 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site DOE60_RS17985 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS17985 IPR006656 Molybdopterin oxidoreductase DOE60_RS17985 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS17985 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS17990 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DOE60_RS17990 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DOE60_RS17995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS17995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS17995 IPR010226 NADH-quinone oxidoreductase, chain I DOE60_RS18000 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DOE60_RS18000 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DOE60_RS18005 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DOE60_RS18005 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOE60_RS18010 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DOE60_RS18010 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE60_RS18010 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DOE60_RS18010 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DOE60_RS18015 IPR003918 NADH:ubiquinone oxidoreductase DOE60_RS18015 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE60_RS18015 IPR010227 NADH-quinone oxidoreductase, chain M/4 DOE60_RS18020 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DOE60_RS18020 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE60_RS18025 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18025 IPR024181 Chemotaxis response regulator CheV DOE60_RS18025 IPR036061 CheW-like domain superfamily DOE60_RS18025 IPR002545 CheW-like domain DOE60_RS18025 IPR011006 CheY-like superfamily DOE60_RS18030 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE60_RS18030 IPR001279 Metallo-beta-lactamase DOE60_RS18030 IPR013469 Ribonuclease BN DOE60_RS18030 IPR013471 Ribonuclease Z/BN DOE60_RS18035 IPR000182 GNAT domain DOE60_RS18035 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS18040 IPR010279 Inner membrane protein YqjD/ElaB DOE60_RS18045 IPR034681 Isochorismate synthase MenF DOE60_RS18045 IPR005801 ADC synthase DOE60_RS18045 IPR015890 Chorismate-utilising enzyme, C-terminal DOE60_RS18045 IPR004561 Isochorismate synthase DOE60_RS18050 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE60_RS18050 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS18050 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase DOE60_RS18050 IPR032264 Menaquinone biosynthesis protein MenD, middle domain DOE60_RS18050 IPR029061 Thiamin diphosphate-binding fold DOE60_RS18055 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase DOE60_RS18055 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS18055 IPR029058 Alpha/Beta hydrolase fold DOE60_RS18060 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS18060 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB DOE60_RS18060 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE60_RS18060 IPR014748 Enoyl-CoA hydratase, C-terminal DOE60_RS18060 IPR001753 Enoyl-CoA hydratase/isomerase DOE60_RS18065 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS18065 IPR029017 Enolase-like, N-terminal DOE60_RS18065 IPR029065 Enolase C-terminal domain-like DOE60_RS18065 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS18065 IPR010196 o-Succinylbenzoate synthase, MenC type1 DOE60_RS18070 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS18070 IPR000873 AMP-dependent synthetase/ligase DOE60_RS18070 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS18070 IPR010192 2-succinylbenzoate--CoA ligase DOE60_RS18070 IPR020845 AMP-binding, conserved site DOE60_RS18075 IPR038679 Signal transduction protein PmrD superfamily DOE60_RS18080 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF DOE60_RS18080 IPR000390 Small multidrug resistance protein family DOE60_RS18085 IPR000390 Small multidrug resistance protein family DOE60_RS18085 IPR000620 EamA domain DOE60_RS18085 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE DOE60_RS18090 IPR003342 Glycosyl transferase family 39/83 DOE60_RS18090 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase DOE60_RS18095 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS18095 IPR002509 NodB homology domain DOE60_RS18095 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable DOE60_RS18100 IPR036291 NAD(P)-binding domain superfamily DOE60_RS18100 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOE60_RS18100 IPR036477 Formyl transferase, N-terminal domain superfamily DOE60_RS18100 IPR021168 Bifunctional polymyxin resistance protein, ArnA DOE60_RS18100 IPR005793 Formyl transferase, C-terminal DOE60_RS18100 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS18100 IPR002376 Formyl transferase, N-terminal DOE60_RS18105 IPR001173 Glycosyltransferase 2-like DOE60_RS18105 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase DOE60_RS18105 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS18110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS18110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS18110 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS18110 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE60_RS18110 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB DOE60_RS18115 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase DOE60_RS18115 IPR013078 Histidine phosphatase superfamily, clade-1 DOE60_RS18115 IPR029033 Histidine phosphatase superfamily DOE60_RS18120 IPR023781 Nucleoside triphosphatase NudI DOE60_RS18120 IPR020476 NUDIX hydrolase DOE60_RS18120 IPR000086 NUDIX hydrolase domain DOE60_RS18120 IPR020084 NUDIX hydrolase, conserved site DOE60_RS18120 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS18125 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS18125 IPR009998 YfaZ DOE60_RS18125 IPR023614 Porin domain superfamily DOE60_RS18130 IPR008135 Competence-induced protein CinA DOE60_RS18130 IPR036425 MoaB/Mog-like domain superfamily DOE60_RS18130 IPR001453 MoaB/Mog domain DOE60_RS18130 IPR036653 CinA-like, C-terminal DOE60_RS18145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS18145 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit DOE60_RS18145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS18145 IPR009051 Alpha-helical ferredoxin DOE60_RS18145 IPR004017 Cysteine-rich domain DOE60_RS18150 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE60_RS18150 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS18150 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit DOE60_RS18155 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DOE60_RS18155 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE60_RS18155 IPR007419 BFD-like [2Fe-2S]-binding domain DOE60_RS18155 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit DOE60_RS18155 IPR006076 FAD dependent oxidoreductase DOE60_RS18155 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS18160 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE60_RS18160 IPR036259 MFS transporter superfamily DOE60_RS18160 IPR011701 Major facilitator superfamily DOE60_RS18160 IPR000849 Sugar phosphate transporter DOE60_RS18160 IPR020846 Major facilitator superfamily domain DOE60_RS18160 IPR005267 Glycerol-3-phosphate transporter DOE60_RS18165 IPR030395 Glycerophosphodiester phosphodiesterase domain DOE60_RS18165 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DOE60_RS18170 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS18170 IPR000847 Transcription regulator HTH, LysR DOE60_RS18170 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18170 IPR005119 LysR, substrate-binding DOE60_RS18175 IPR020846 Major facilitator superfamily domain DOE60_RS18175 IPR036259 MFS transporter superfamily DOE60_RS18175 IPR011701 Major facilitator superfamily DOE60_RS18180 IPR012675 Beta-grasp domain superfamily DOE60_RS18180 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE60_RS18180 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE60_RS18180 IPR036010 2Fe-2S ferredoxin-like superfamily DOE60_RS18185 IPR030475 Ribonucleotide reductase small subunit, acitve site DOE60_RS18185 IPR033909 Ribonucleotide reductase small subunit DOE60_RS18185 IPR012348 Ribonucleotide reductase-like DOE60_RS18185 IPR009078 Ferritin-like superfamily DOE60_RS18185 IPR000358 Ribonucleotide reductase small subunit family DOE60_RS18190 IPR000788 Ribonucleotide reductase large subunit, C-terminal DOE60_RS18190 IPR013509 Ribonucleotide reductase large subunit, N-terminal DOE60_RS18190 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DOE60_RS18190 IPR013346 Ribonucleotide reductase, class I , alpha subunit DOE60_RS18190 IPR039718 Ribonucleoside-diphosphate reductase large subunit DOE60_RS18190 IPR005144 ATP-cone domain DOE60_RS18195 IPR010233 Ubiquinone biosynthesis O-methyltransferase DOE60_RS18195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS18200 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOE60_RS18200 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOE60_RS18200 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE60_RS18200 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE60_RS18200 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOE60_RS18200 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOE60_RS18200 IPR005743 DNA gyrase, subunit A DOE60_RS18205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS18205 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS18205 IPR005467 Histidine kinase domain DOE60_RS18205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS18205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS18205 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal DOE60_RS18205 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18205 IPR038388 RcsC, C-terminal domain superfamily DOE60_RS18205 IPR011006 CheY-like superfamily DOE60_RS18205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS18205 IPR030856 Sensor histidine kinase RcsC DOE60_RS18210 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18210 IPR011006 CheY-like superfamily DOE60_RS18210 IPR030864 Transcriptional regulatory protein RcsB DOE60_RS18210 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS18210 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18210 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS18215 IPR005467 Histidine kinase domain DOE60_RS18215 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE60_RS18215 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily DOE60_RS18215 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain DOE60_RS18215 IPR030861 Phosphotransferase RcsD DOE60_RS18215 IPR036641 HPT domain superfamily DOE60_RS18215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS18215 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS18225 IPR001897 Porin, gammaproteobacterial DOE60_RS18225 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS18225 IPR023614 Porin domain superfamily DOE60_RS18225 IPR001702 Porin, Gram-negative type DOE60_RS18230 IPR042159 Flavin-trafficking protein ApbE DOE60_RS18230 IPR003374 ApbE-like superfamily DOE60_RS18230 IPR024932 Flavin transferase ApbE DOE60_RS18235 IPR009057 Homeobox-like domain superfamily DOE60_RS18235 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS18235 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DOE60_RS18235 IPR016221 Bifunctional regulatory protein Ada DOE60_RS18235 IPR004026 Ada DNA repair, metal-binding DOE60_RS18235 IPR035451 Ada-like domain superfamily DOE60_RS18235 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DOE60_RS18235 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOE60_RS18235 IPR018062 HTH domain AraC-type, conserved site DOE60_RS18235 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOE60_RS18235 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18235 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DOE60_RS18240 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DOE60_RS18240 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DOE60_RS18240 IPR005123 Oxoglutarate/iron-dependent dioxygenase DOE60_RS18240 IPR004574 Alkylated DNA repair protein AlkB DOE60_RS18245 IPR005898 Cyclic peptide transporter DOE60_RS18245 IPR003439 ABC transporter-like DOE60_RS18245 IPR017871 ABC transporter, conserved site DOE60_RS18245 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE60_RS18245 IPR011527 ABC transporter type 1, transmembrane domain DOE60_RS18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18245 IPR003593 AAA+ ATPase domain DOE60_RS18250 IPR036513 STAS domain superfamily DOE60_RS18250 IPR002645 STAS domain DOE60_RS18250 IPR018045 Sulphate anion transporter, conserved site DOE60_RS18250 IPR001902 SLC26A/SulP transporter DOE60_RS18250 IPR011547 SLC26A/SulP transporter domain DOE60_RS18255 IPR027438 Ecotin, C-terminal DOE60_RS18255 IPR036198 Ecotin superfamily DOE60_RS18255 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria DOE60_RS18255 IPR005658 Proteinase inhibitor I11, ecotin DOE60_RS18260 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS18260 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS18260 IPR004496 Ferredoxin-type protein NapF DOE60_RS18265 IPR005623 Chaperone NapD, nitrate reductase assembly DOE60_RS18270 IPR006656 Molybdopterin oxidoreductase DOE60_RS18270 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS18270 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS18270 IPR010051 Periplasmic nitrate reductase, large subunit DOE60_RS18270 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS18270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS18270 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS18270 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain DOE60_RS18270 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS18275 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS18275 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS18275 IPR004494 MauM/NapG ferredoxin-type protein DOE60_RS18275 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS18280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS18280 IPR011886 Ferredoxin-type protein, NapH/MauN family DOE60_RS18280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS18285 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DOE60_RS18285 IPR011031 Multihaem cytochrome DOE60_RS18285 IPR036280 Multiheme cytochrome superfamily DOE60_RS18290 IPR024717 Denitrification system component NapC/NirT/NrfH DOE60_RS18290 IPR038266 NapC/NirT cytochrome c superfamily DOE60_RS18290 IPR011031 Multihaem cytochrome DOE60_RS18290 IPR036280 Multiheme cytochrome superfamily DOE60_RS18290 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT DOE60_RS18290 IPR005126 NapC/NirT cytochrome c, N-terminal DOE60_RS18295 IPR003439 ABC transporter-like DOE60_RS18295 IPR017871 ABC transporter, conserved site DOE60_RS18295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18295 IPR005895 ABC transporter, haem export, CcmA DOE60_RS18295 IPR003593 AAA+ ATPase domain DOE60_RS18310 IPR007078 Haem exporter protein D (CcmD) DOE60_RS18315 IPR036127 CcmE-like superfamily DOE60_RS18315 IPR004329 CcmE/CycJ protein DOE60_RS18320 IPR003567 Cytochrome c-type biogenesis protein DOE60_RS18320 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOE60_RS18320 IPR003568 Cytochrome c-type biogenesis protein CcmF DOE60_RS18320 IPR002541 Cytochrome c assembly protein DOE60_RS18340 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18340 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS18340 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS18340 IPR011006 CheY-like superfamily DOE60_RS18360 IPR010391 DNA damage-inducible protein DinI-like DOE60_RS18360 IPR036687 DinI-like superfamily DOE60_RS18365 IPR036515 Transposase IS200-like superfamily DOE60_RS18365 IPR002686 Transposase IS200-like DOE60_RS18410 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS18410 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS18410 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS18410 IPR001646 Pentapeptide repeat DOE60_RS18420 IPR036590 SOS response associated peptidase-like DOE60_RS18420 IPR003738 SOS response associated peptidase (SRAP) DOE60_RS18435 IPR024588 Inner membrane protein YejM, N-terminal DOE60_RS18435 IPR012159 Inner membrane protein YejM DOE60_RS18435 IPR000917 Sulfatase, N-terminal DOE60_RS18435 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE60_RS18440 IPR009857 Uncharacterised protein family UPF0352 DOE60_RS18440 IPR023202 YejL-like superfamily DOE60_RS18445 IPR007358 Nucleoid-associated protein NdpA DOE60_RS18450 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOE60_RS18450 IPR029751 Ribosomal protein L25 DOE60_RS18450 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOE60_RS18450 IPR020055 Ribosomal protein L25, short-form DOE60_RS18455 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS18455 IPR006935 Helicase/UvrB, N-terminal DOE60_RS18455 IPR001650 Helicase, C-terminal DOE60_RS18455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18455 IPR011332 Zinc-binding ribosomal protein DOE60_RS18460 IPR002942 RNA-binding S4 domain DOE60_RS18460 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE60_RS18460 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS18460 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS18460 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE60_RS18460 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE60_RS18460 IPR036986 RNA-binding S4 domain superfamily DOE60_RS18465 IPR020846 Major facilitator superfamily domain DOE60_RS18465 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DOE60_RS18465 IPR036259 MFS transporter superfamily DOE60_RS18465 IPR011701 Major facilitator superfamily DOE60_RS18465 IPR004734 Multidrug resistance protein DOE60_RS18470 IPR020489 Uncharacterised protein family YejG DOE60_RS18475 IPR003593 AAA+ ATPase domain DOE60_RS18475 IPR003439 ABC transporter-like DOE60_RS18475 IPR017871 ABC transporter, conserved site DOE60_RS18475 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS18475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18480 IPR035906 MetI-like superfamily DOE60_RS18480 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS18480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS18485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS18485 IPR035906 MetI-like superfamily DOE60_RS18490 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS18490 IPR000914 Solute-binding protein family 5 domain DOE60_RS18490 IPR039424 Solute-binding protein family 5 DOE60_RS18495 IPR001633 EAL domain DOE60_RS18495 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE60_RS18495 IPR035919 EAL domain superfamily DOE60_RS18500 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS18500 IPR000064 Endopeptidase, NLPC/P60 domain DOE60_RS18510 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE60_RS18510 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE60_RS18510 IPR032908 Lipid A 1-diphosphate synthase DOE60_RS18515 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE60_RS18515 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE60_RS18515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18520 IPR004839 Aminotransferase, class I/classII DOE60_RS18520 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS18520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS18520 IPR000524 Transcription regulator HTH, GntR DOE60_RS18520 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18520 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS18525 IPR005126 NapC/NirT cytochrome c, N-terminal DOE60_RS18525 IPR038266 NapC/NirT cytochrome c superfamily DOE60_RS18525 IPR036280 Multiheme cytochrome superfamily DOE60_RS18525 IPR011031 Multihaem cytochrome DOE60_RS18525 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK DOE60_RS18530 IPR006656 Molybdopterin oxidoreductase DOE60_RS18530 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS18530 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS18530 IPR011887 Trimethylamine-N-oxide reductase TorA DOE60_RS18530 IPR041460 Molybdopterin oxidoreductase, N-terminal DOE60_RS18530 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain DOE60_RS18530 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase DOE60_RS18530 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS18530 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS18535 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS18535 IPR023069 Chaperone TorD DOE60_RS18535 IPR036411 TorD-like superfamily DOE60_RS18535 IPR036386 HscB, C-terminal domain superfamily DOE60_RS18540 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS18540 IPR001059 Translation elongation factor P/YeiP, central DOE60_RS18540 IPR015365 Elongation factor P, C-terminal DOE60_RS18540 IPR014722 Ribosomal protein L2, domain 2 DOE60_RS18540 IPR020599 Translation elongation factor P/YeiP DOE60_RS18540 IPR013852 Translation elongation factor P/YeiP, conserved site DOE60_RS18540 IPR011897 Translation elongation factor P-like, YeiP DOE60_RS18540 IPR013185 Translation elongation factor, KOW-like DOE60_RS18540 IPR008991 Translation protein SH3-like domain superfamily DOE60_RS18550 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE60_RS18565 IPR036259 MFS transporter superfamily DOE60_RS18565 IPR020846 Major facilitator superfamily domain DOE60_RS18565 IPR004750 Sugar efflux DOE60_RS18565 IPR011701 Major facilitator superfamily DOE60_RS18570 IPR016152 Phosphotransferase/anion transporter DOE60_RS18570 IPR035895 HPr-like superfamily DOE60_RS18570 IPR000032 Phosphocarrier protein HPr-like DOE60_RS18570 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE60_RS18570 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE60_RS18570 IPR002178 PTS EIIA type-2 domain DOE60_RS18575 IPR029056 Ribokinase-like DOE60_RS18575 IPR011611 Carbohydrate kinase PfkB DOE60_RS18575 IPR022463 Fructose 1-phosphate kinase DOE60_RS18575 IPR017583 Tagatose/fructose phosphokinase DOE60_RS18575 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS18580 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS18580 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE60_RS18580 IPR003352 Phosphotransferase system, EIIC DOE60_RS18580 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS18580 IPR036095 PTS system IIB component-like superfamily DOE60_RS18580 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS18580 IPR006327 Phosphotransferase system, fructose IIC component DOE60_RS18585 IPR018246 AP endonuclease 2, zinc binding site DOE60_RS18585 IPR036237 Xylose isomerase-like superfamily DOE60_RS18585 IPR013022 Xylose isomerase-like, TIM barrel domain DOE60_RS18585 IPR001719 AP endonuclease 2 DOE60_RS18590 IPR004630 Uncharacterised protein family UPF0324, bacteria DOE60_RS18590 IPR018383 Uncharacterised protein family UPF0324, prokaryote DOE60_RS18595 IPR005119 LysR, substrate-binding DOE60_RS18595 IPR000847 Transcription regulator HTH, LysR DOE60_RS18595 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18595 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS18600 IPR004840 Amino acid permease, conserved site DOE60_RS18600 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS18605 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS18605 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS18605 IPR012910 TonB-dependent receptor, plug domain DOE60_RS18605 IPR010916 TonB box, conserved site DOE60_RS18605 IPR010917 TonB-dependent receptor, conserved site DOE60_RS18605 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS18605 IPR039426 Vitamin B12 transporter BtuB-like DOE60_RS18610 IPR036259 MFS transporter superfamily DOE60_RS18610 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE60_RS18610 IPR000849 Sugar phosphate transporter DOE60_RS18610 IPR020846 Major facilitator superfamily domain DOE60_RS18610 IPR011701 Major facilitator superfamily DOE60_RS18615 IPR002912 ACT domain DOE60_RS18615 IPR036412 HAD-like superfamily DOE60_RS18615 IPR023214 HAD superfamily DOE60_RS18615 IPR023190 Phosphoserine phosphatase, domain 2 DOE60_RS18620 IPR005131 Serine dehydratase beta chain DOE60_RS18620 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE60_RS18620 IPR029009 Allosteric substrate binding domain superfamily DOE60_RS18620 IPR005130 Serine dehydratase-like, alpha subunit DOE60_RS18630 IPR000801 Putative esterase DOE60_RS18630 IPR029058 Alpha/Beta hydrolase fold DOE60_RS18630 IPR014186 S-formylglutathione hydrolase DOE60_RS18640 IPR020602 GTP cyclohydrolase I domain DOE60_RS18640 IPR018234 GTP cyclohydrolase I, conserved site DOE60_RS18640 IPR001474 GTP cyclohydrolase I DOE60_RS18645 IPR007349 Domain of unknown function DUF418 DOE60_RS18655 IPR028082 Periplasmic binding protein-like I DOE60_RS18655 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS18655 IPR000843 LacI-type HTH domain DOE60_RS18660 IPR025997 Periplasmic binding protein DOE60_RS18660 IPR028082 Periplasmic binding protein-like I DOE60_RS18665 IPR003593 AAA+ ATPase domain DOE60_RS18665 IPR003439 ABC transporter-like DOE60_RS18665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18665 IPR015862 ABC transporter, galactose import, MglA DOE60_RS18665 IPR017871 ABC transporter, conserved site DOE60_RS18670 IPR001851 ABC transporter, permease DOE60_RS18670 IPR030158 Galactoside transport system permease protein MglC DOE60_RS18675 IPR005720 Dihydroorotate dehydrogenase domain DOE60_RS18675 IPR013785 Aldolase-type TIM barrel DOE60_RS18675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS18675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS18680 IPR009051 Alpha-helical ferredoxin DOE60_RS18680 IPR028261 Dihydroprymidine dehydrogenase domain II DOE60_RS18680 IPR023753 FAD/NAD(P)-binding domain DOE60_RS18680 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS18685 IPR020155 Uncharacterised protein family YeiS DOE60_RS18690 IPR003848 Domain of unknown function DUF218 DOE60_RS18690 IPR023604 Uncharacterised protein family SanA DOE60_RS18695 IPR020797 Cytidine deaminase, bacteria DOE60_RS18695 IPR016193 Cytidine deaminase-like DOE60_RS18695 IPR006263 Cytidine deaminase, homodimeric DOE60_RS18695 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain DOE60_RS18695 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE60_RS18695 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE60_RS18700 IPR005261 Conserved hypothetical protein CHP00659 DOE60_RS18700 IPR007300 CidB/LrgB family DOE60_RS18705 IPR005538 LrgA/CidA family DOE60_RS18705 IPR022957 Uncharacterised protein family UPF0299 DOE60_RS18710 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS18710 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain DOE60_RS18710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18710 IPR000847 Transcription regulator HTH, LysR DOE60_RS18710 IPR005119 LysR, substrate-binding DOE60_RS18715 IPR011701 Major facilitator superfamily DOE60_RS18715 IPR036259 MFS transporter superfamily DOE60_RS18715 IPR020846 Major facilitator superfamily domain DOE60_RS18720 IPR011051 RmlC-like cupin domain superfamily DOE60_RS18720 IPR014710 RmlC-like jelly roll fold DOE60_RS18720 IPR013096 Cupin 2, conserved barrel DOE60_RS18725 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE60_RS18725 IPR011234 Fumarylacetoacetase-like, C-terminal DOE60_RS18730 IPR040079 Glutathione Transferase family DOE60_RS18730 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS18730 IPR036249 Thioredoxin-like superfamily DOE60_RS18730 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DOE60_RS18730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS18730 IPR005955 Glutathione S-transferases, class Zeta DOE60_RS18730 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS18730 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS18730 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DOE60_RS18735 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS18735 IPR002938 FAD-binding domain DOE60_RS18740 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal DOE60_RS18740 IPR035587 DUS-like, FMN-binding domain DOE60_RS18740 IPR001269 tRNA-dihydrouridine synthase DOE60_RS18740 IPR013785 Aldolase-type TIM barrel DOE60_RS18740 IPR032886 tRNA-dihydrouridine(16) synthase DOE60_RS18740 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE60_RS18750 IPR003423 Outer membrane efflux protein DOE60_RS18750 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE60_RS18755 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS18755 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS18755 IPR036291 NAD(P)-binding domain superfamily DOE60_RS18760 IPR032816 SNARE associated Golgi protein DOE60_RS18765 IPR006977 Yip1 domain DOE60_RS18775 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE60_RS18775 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS18775 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE60_RS18780 IPR006094 FAD linked oxidase, N-terminal DOE60_RS18780 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal DOE60_RS18780 IPR016164 FAD-linked oxidase-like, C-terminal DOE60_RS18780 IPR016166 FAD-binding domain, PCMH-type DOE60_RS18780 IPR012256 D-lactate dehydrogenase DOE60_RS18780 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS18780 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE60_RS18780 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 DOE60_RS18780 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 DOE60_RS18780 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS18785 IPR026891 Fibronectin type III-like domain DOE60_RS18785 IPR019800 Glycoside hydrolase, family 3, active site DOE60_RS18785 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOE60_RS18785 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOE60_RS18785 IPR017853 Glycoside hydrolase superfamily DOE60_RS18785 IPR013783 Immunoglobulin-like fold DOE60_RS18785 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOE60_RS18785 IPR001764 Glycoside hydrolase, family 3, N-terminal DOE60_RS18790 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE60_RS18795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS18795 IPR035906 MetI-like superfamily DOE60_RS18800 IPR003439 ABC transporter-like DOE60_RS18800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18800 IPR017871 ABC transporter, conserved site DOE60_RS18800 IPR003593 AAA+ ATPase domain DOE60_RS18805 IPR035906 MetI-like superfamily DOE60_RS18805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS18810 IPR020870 Uncharacterised protein family UPF0387, membrane DOE60_RS18815 IPR000551 MerR-type HTH domain DOE60_RS18815 IPR009061 Putative DNA-binding domain superfamily DOE60_RS18820 IPR003018 GAF domain DOE60_RS18820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS18820 IPR010559 Signal transduction histidine kinase, internal region DOE60_RS18820 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region DOE60_RS18825 IPR011006 CheY-like superfamily DOE60_RS18825 IPR007492 LytTR DNA-binding domain DOE60_RS18825 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18830 IPR009921 Domain of unknown function DUF1456 DOE60_RS18835 IPR036699 YehR-like superfamily DOE60_RS18835 IPR009736 Protein of unknown function DUF1307 DOE60_RS18845 IPR029038 Methionyl-tRNA synthetase, Zn-domain DOE60_RS18845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS18845 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain DOE60_RS18845 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal DOE60_RS18845 IPR023458 Methionine-tRNA ligase, type 1 DOE60_RS18845 IPR014758 Methionyl-tRNA synthetase DOE60_RS18845 IPR015413 Methionyl/Leucyl tRNA synthetase DOE60_RS18845 IPR033911 Methioninyl-tRNA synthetase core domain DOE60_RS18845 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS18845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS18845 IPR002547 tRNA-binding domain DOE60_RS18845 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS18850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18850 IPR019591 Mrp/NBP35 ATP-binding protein DOE60_RS18850 IPR034904 Fe-S cluster assembly domain superfamily DOE60_RS18850 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOE60_RS18850 IPR000808 Mrp, conserved site DOE60_RS18865 IPR016148 Pili assembly chaperone, C-terminal DOE60_RS18865 IPR001829 Pili assembly chaperone, bacterial DOE60_RS18865 IPR013783 Immunoglobulin-like fold DOE60_RS18865 IPR018046 Pili assembly chaperone, conserved site DOE60_RS18865 IPR008962 PapD-like superfamily DOE60_RS18865 IPR016147 Pili assembly chaperone, N-terminal DOE60_RS18865 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE60_RS18870 IPR018030 Fimbrial membrane usher, conserved site DOE60_RS18870 IPR042186 Outer membrane usher protein FimD, plug domain DOE60_RS18870 IPR025949 PapC-like, C-terminal domain DOE60_RS18870 IPR000015 Outer membrane usher protein DOE60_RS18870 IPR025885 PapC, N-terminal domain DOE60_RS18870 IPR037224 PapC, N-terminal domain superfamily DOE60_RS18880 IPR024572 Nickel/cobalt homeostasis protein RcnB DOE60_RS18885 IPR029056 Ribokinase-like DOE60_RS18885 IPR000417 Hydroxyethylthiazole kinase DOE60_RS18890 IPR029056 Ribokinase-like DOE60_RS18890 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE60_RS18890 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DOE60_RS18895 IPR011663 UbiC transcription regulator-associated DOE60_RS18895 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18895 IPR000524 Transcription regulator HTH, GntR DOE60_RS18895 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS18895 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE60_RS18900 IPR029056 Ribokinase-like DOE60_RS18900 IPR002139 Ribokinase/fructokinase DOE60_RS18900 IPR011611 Carbohydrate kinase PfkB DOE60_RS18900 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS18905 IPR005502 ADP-ribosylation/Crystallin J1 DOE60_RS18905 IPR036705 ADP-ribosylation/Crystallin J1 superfamily DOE60_RS18910 IPR004740 Nucleoside:H+ symporter DOE60_RS18910 IPR020846 Major facilitator superfamily domain DOE60_RS18910 IPR036259 MFS transporter superfamily DOE60_RS18915 IPR002915 DeoC/FbaB/ lacD aldolase DOE60_RS18915 IPR041720 Aldolase FbaB-like, archaeal-type DOE60_RS18915 IPR013785 Aldolase-type TIM barrel DOE60_RS18920 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE60_RS18920 IPR022433 Lipid kinase YegS DOE60_RS18920 IPR001206 Diacylglycerol kinase, catalytic domain DOE60_RS18920 IPR005218 Diacylglycerol/lipid kinase DOE60_RS18920 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOE60_RS18930 IPR001539 Peptidase U32 DOE60_RS18930 IPR032525 Peptidase family U32, C-terminal DOE60_RS18935 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS18935 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS18935 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS18935 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS18935 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS18935 IPR011006 CheY-like superfamily DOE60_RS18940 IPR003660 HAMP domain DOE60_RS18940 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS18940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS18940 IPR005467 Histidine kinase domain DOE60_RS18940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS18940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS18940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS18950 IPR023931 Multidrug resistance protein MdtC DOE60_RS18950 IPR001036 Acriflavin resistance protein DOE60_RS18950 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS18955 IPR022831 Multidrug resistance protein MdtB DOE60_RS18955 IPR001036 Acriflavin resistance protein DOE60_RS18955 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE60_RS18960 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS18960 IPR022824 Multidrug resistance protein MdtA DOE60_RS18960 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE60_RS18970 IPR013126 Heat shock protein 70 family DOE60_RS18970 IPR018181 Heat shock protein 70, conserved site DOE60_RS18970 IPR042054 YegD-like DOE60_RS18980 IPR011257 DNA glycosylase DOE60_RS18980 IPR000035 Alkylbase DNA glycosidase, conserved site DOE60_RS18980 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DOE60_RS18980 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DOE60_RS18980 IPR003265 HhH-GPD domain DOE60_RS18980 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE60_RS18985 IPR029787 Nucleotide cyclase DOE60_RS18985 IPR000014 PAS domain DOE60_RS18985 IPR013655 PAS fold-3 DOE60_RS18985 IPR000700 PAS-associated, C-terminal DOE60_RS18985 IPR035965 PAS domain superfamily DOE60_RS18985 IPR007895 MASE1 DOE60_RS18985 IPR001633 EAL domain DOE60_RS18985 IPR035919 EAL domain superfamily DOE60_RS18985 IPR001610 PAC motif DOE60_RS18985 IPR013656 PAS fold-4 DOE60_RS18985 IPR000160 GGDEF domain DOE60_RS18990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS18990 IPR006083 Phosphoribulokinase/uridine kinase DOE60_RS18990 IPR026008 Uridine kinase DOE60_RS18990 IPR000764 Uridine kinase-like DOE60_RS18995 IPR033704 dUTPase, trimeric DOE60_RS18995 IPR036157 dUTPase-like superfamily DOE60_RS18995 IPR029054 dUTPase-like DOE60_RS18995 IPR011962 dCTP deaminase DOE60_RS19000 IPR007844 AsmA DOE60_RS19005 IPR000644 CBS domain DOE60_RS19005 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS19005 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS19005 IPR005496 Integral membrane protein TerC DOE60_RS19005 IPR005170 Transporter-associated domain DOE60_RS19015 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain DOE60_RS19015 IPR019554 Soluble ligand binding domain DOE60_RS19015 IPR003715 Polysaccharide export protein DOE60_RS19020 IPR023485 Phosphotyrosine protein phosphatase I DOE60_RS19020 IPR017867 Protein-tyrosine phosphatase, low molecular weight DOE60_RS19020 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOE60_RS19025 IPR025669 AAA domain DOE60_RS19025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19025 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE60_RS19025 IPR005702 Exopolysaccharide synthesis protein DOE60_RS19025 IPR032807 Tyrosine kinase, G-rich domain DOE60_RS19030 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19030 IPR001173 Glycosyltransferase 2-like DOE60_RS19030 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA DOE60_RS19035 IPR001451 Hexapeptide repeat DOE60_RS19035 IPR011004 Trimeric LpxA-like superfamily DOE60_RS19035 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB DOE60_RS19035 IPR005881 Serine O-acetyltransferase DOE60_RS19035 IPR018357 Hexapeptide transferase, conserved site DOE60_RS19040 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC DOE60_RS19040 IPR001296 Glycosyl transferase, family 1 DOE60_RS19040 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS19045 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD DOE60_RS19050 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE DOE60_RS19050 IPR001173 Glycosyltransferase 2-like DOE60_RS19050 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19055 IPR001451 Hexapeptide repeat DOE60_RS19055 IPR018357 Hexapeptide transferase, conserved site DOE60_RS19055 IPR011004 Trimeric LpxA-like superfamily DOE60_RS19055 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF DOE60_RS19060 IPR006368 GDP-mannose 4,6-dehydratase DOE60_RS19060 IPR016040 NAD(P)-binding domain DOE60_RS19060 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19065 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS19065 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase DOE60_RS19065 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19070 IPR033715 GDP-mannose mannosyl hydrolase DOE60_RS19070 IPR000086 NUDIX hydrolase domain DOE60_RS19070 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria DOE60_RS19070 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS19070 IPR020084 NUDIX hydrolase, conserved site DOE60_RS19075 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS19075 IPR001296 Glycosyl transferase, family 1 DOE60_RS19075 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI DOE60_RS19080 IPR011051 RmlC-like cupin domain superfamily DOE60_RS19080 IPR014710 RmlC-like jelly roll fold DOE60_RS19080 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DOE60_RS19080 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19080 IPR005835 Nucleotidyl transferase domain DOE60_RS19080 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DOE60_RS19085 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE60_RS19085 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE60_RS19085 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE60_RS19085 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE60_RS19085 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE60_RS19085 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE60_RS19085 IPR005841 Alpha-D-phosphohexomutase superfamily DOE60_RS19085 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE60_RS19090 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DOE60_RS19090 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DOE60_RS19090 IPR003362 Bacterial sugar transferase DOE60_RS19100 IPR007345 Polysaccharide pyruvyl transferase DOE60_RS19100 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK DOE60_RS19105 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL DOE60_RS19105 IPR001296 Glycosyl transferase, family 1 DOE60_RS19105 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS19110 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS19110 IPR011050 Pectin lyase fold/virulence factor DOE60_RS19110 IPR012334 Pectin lyase fold DOE60_RS19110 IPR023882 Colanic acid biosynthesis WcaM DOE60_RS19115 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19115 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit DOE60_RS19115 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DOE60_RS19115 IPR005835 Nucleotidyl transferase domain DOE60_RS19120 IPR005888 dTDP-glucose 4,6-dehydratase DOE60_RS19120 IPR016040 NAD(P)-binding domain DOE60_RS19120 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19125 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE60_RS19125 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS19125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS19130 IPR014985 WbqC-like protein family DOE60_RS19150 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19150 IPR001173 Glycosyltransferase 2-like DOE60_RS19165 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE60_RS19165 IPR001296 Glycosyl transferase, family 1 DOE60_RS19170 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS19170 IPR005886 UDP-glucose 4-epimerase DOE60_RS19170 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19175 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOE60_RS19175 IPR005835 Nucleotidyl transferase domain DOE60_RS19175 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19180 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE60_RS19180 IPR006114 6-phosphogluconate dehydrogenase, C-terminal DOE60_RS19180 IPR006184 6-phosphogluconate-binding site DOE60_RS19180 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating DOE60_RS19180 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS19180 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19180 IPR006183 6-phosphogluconate dehydrogenase DOE60_RS19180 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS19190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS19190 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19190 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOE60_RS19190 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOE60_RS19190 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOE60_RS19190 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOE60_RS19190 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOE60_RS19190 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DOE60_RS19195 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE60_RS19200 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily DOE60_RS19200 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain DOE60_RS19200 IPR023019 Histidine biosynthesis bifunctional protein HisIE DOE60_RS19200 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like DOE60_RS19200 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase DOE60_RS19205 IPR011060 Ribulose-phosphate binding barrel DOE60_RS19205 IPR004651 Histidine biosynthesis, HisF DOE60_RS19205 IPR006062 Histidine biosynthesis DOE60_RS19205 IPR013785 Aldolase-type TIM barrel DOE60_RS19210 IPR013785 Aldolase-type TIM barrel DOE60_RS19210 IPR006062 Histidine biosynthesis DOE60_RS19210 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DOE60_RS19210 IPR011060 Ribulose-phosphate binding barrel DOE60_RS19210 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DOE60_RS19215 IPR017926 Glutamine amidotransferase DOE60_RS19215 IPR029062 Class I glutamine amidotransferase-like DOE60_RS19215 IPR010139 Imidazole glycerol phosphate synthase, subunit H DOE60_RS19220 IPR023214 HAD superfamily DOE60_RS19220 IPR020566 Histidine biosynthesis bifunctional protein HisB DOE60_RS19220 IPR005954 Histidinol-phosphatase DOE60_RS19220 IPR006543 Histidinol-phosphate phosphatase DOE60_RS19220 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily DOE60_RS19220 IPR036412 HAD-like superfamily DOE60_RS19220 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS19220 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DOE60_RS19220 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DOE60_RS19220 IPR000807 Imidazoleglycerol-phosphate dehydratase DOE60_RS19225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS19225 IPR005861 Histidinol-phosphate aminotransferase family DOE60_RS19225 IPR004839 Aminotransferase, class I/classII DOE60_RS19225 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS19225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS19225 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE60_RS19230 IPR012131 Histidinol dehydrogenase DOE60_RS19230 IPR001692 Histidinol dehydrogenase, conserved site DOE60_RS19230 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS19230 IPR022695 Histidinol dehydrogenase, monofunctional DOE60_RS19235 IPR020621 ATP phosphoribosyltransferase HisG, long form DOE60_RS19235 IPR013820 ATP phosphoribosyltransferase, catalytic domain DOE60_RS19235 IPR018198 ATP phosphoribosyltransferase, conserved site DOE60_RS19235 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE60_RS19235 IPR001348 ATP phosphoribosyltransferase HisG DOE60_RS19235 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE60_RS19235 IPR013115 Histidine biosynthesis HisG, C-terminal DOE60_RS19245 IPR001509 NAD-dependent epimerase/dehydratase DOE60_RS19245 IPR036291 NAD(P)-binding domain superfamily DOE60_RS19250 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS19250 IPR000847 Transcription regulator HTH, LysR DOE60_RS19250 IPR005119 LysR, substrate-binding DOE60_RS19250 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS19260 IPR002293 Amino acid/polyamine transporter I DOE60_RS19265 IPR034748 Exonuclease I, C-terminal alpha-helical domain DOE60_RS19265 IPR023607 Exodeoxyribonuclease I DOE60_RS19265 IPR038649 Exonuclease I, SH3-like domain superfamily DOE60_RS19265 IPR013620 Exodeoxyribonuclease I, C-terminal DOE60_RS19265 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE60_RS19265 IPR036397 Ribonuclease H superfamily DOE60_RS19265 IPR034747 Exonuclease I, SH3-like domain DOE60_RS19265 IPR012337 Ribonuclease H-like superfamily DOE60_RS19275 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS19275 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS19275 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS19290 IPR024770 TcdA/TcdB toxin, catalytic glycosyltransferase domain DOE60_RS19290 IPR024769 TcdA/TcdB toxin, pore forming domain DOE60_RS19290 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily DOE60_RS19290 IPR020974 CGT/MARTX, cysteine protease (CPD) domain DOE60_RS19290 IPR018337 Cell wall/choline-binding repeat DOE60_RS19290 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS19290 IPR024772 TcdA/TcdB toxin, N-terminal helical domain DOE60_RS19335 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS19335 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS19335 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS19335 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS19335 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS19335 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS19335 IPR006656 Molybdopterin oxidoreductase DOE60_RS19335 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS19340 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS19340 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS19345 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS19345 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS19350 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE60_RS19350 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE60_RS19350 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE60_RS19350 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE60_RS19350 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE60_RS19350 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS19355 IPR024911 DNA gyrase inhibitor GyrI DOE60_RS19355 IPR010499 Bacterial transcription activator, effector binding DOE60_RS19355 IPR029442 GyrI-like small molecule binding domain DOE60_RS19355 IPR011256 Regulatory factor, effector binding domain superfamily DOE60_RS19360 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE60_RS19365 IPR007458 Protein of unknown function DUF496 DOE60_RS19370 IPR006204 GHMP kinase N-terminal domain DOE60_RS19370 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related DOE60_RS19370 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS19370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS19375 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE60_RS19375 IPR004372 Acetate/propionate kinase DOE60_RS19375 IPR024896 Propionate kinase PduW DOE60_RS19375 IPR000890 Aliphatic acid kinase, short-chain DOE60_RS19380 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV DOE60_RS19380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19385 IPR000249 Microcompartment protein, bacteria DOE60_RS19385 IPR009307 Ethanolamine utilisation EutS DOE60_RS19385 IPR037233 CcmK-like superfamily DOE60_RS19390 IPR000249 Microcompartment protein, bacteria DOE60_RS19390 IPR037233 CcmK-like superfamily DOE60_RS19390 IPR020808 Bacterial microcompartments protein, conserved site DOE60_RS19395 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS19395 IPR009051 Alpha-helical ferredoxin DOE60_RS19395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS19395 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE60_RS19395 IPR019554 Soluble ligand binding domain DOE60_RS19395 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DOE60_RS19395 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE60_RS19395 IPR026902 RnfC Barrel sandwich hybrid domain DOE60_RS19400 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS19400 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase DOE60_RS19400 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain DOE60_RS19400 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS19400 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS19400 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS19400 IPR015590 Aldehyde dehydrogenase domain DOE60_RS19400 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS19400 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS19405 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related DOE60_RS19405 IPR015590 Aldehyde dehydrogenase domain DOE60_RS19405 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS19405 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS19405 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS19410 IPR016030 Cobalamin adenosyltransferase-like DOE60_RS19410 IPR036451 Cobalamin adenosyltransferase-like superfamily DOE60_RS19410 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type DOE60_RS19415 IPR036677 EutN/Ccml superfamily DOE60_RS19415 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml DOE60_RS19425 IPR008300 Phosphate propanoyltransferase DOE60_RS19435 IPR000249 Microcompartment protein, bacteria DOE60_RS19435 IPR037233 CcmK-like superfamily DOE60_RS19435 IPR020808 Bacterial microcompartments protein, conserved site DOE60_RS19445 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily DOE60_RS19445 IPR030994 Diol dehydratase reactivase ATPase-like domain DOE60_RS19445 IPR040916 DD-reactivating factor swiveling domain DOE60_RS19445 IPR009191 Diol dehydratase-reactivating factor alpha subunit DOE60_RS19450 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily DOE60_RS19450 IPR003207 Propanediol/glycerol dehydratase, small subunit DOE60_RS19455 IPR010254 B12-dependent dehydratases, beta subunit DOE60_RS19455 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor DOE60_RS19455 IPR025541 Propanediol/glycerol dehydratase, medium subunit DOE60_RS19460 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic DOE60_RS19460 IPR036999 Diol/glycerol dehydratase, large subunit superfamily DOE60_RS19460 IPR003206 Diol/glycerol dehydratase, large subunit DOE60_RS19465 IPR037233 CcmK-like superfamily DOE60_RS19465 IPR030984 Microcompartment protein PduB DOE60_RS19465 IPR009193 Polyhedral organelle shell protein, EutL/PduB type DOE60_RS19465 IPR000249 Microcompartment protein, bacteria DOE60_RS19470 IPR000249 Microcompartment protein, bacteria DOE60_RS19470 IPR037233 CcmK-like superfamily DOE60_RS19470 IPR020808 Bacterial microcompartments protein, conserved site DOE60_RS19475 IPR023271 Aquaporin-like DOE60_RS19475 IPR000425 Major intrinsic protein DOE60_RS19475 IPR022357 Major intrinsic protein, conserved site DOE60_RS19480 IPR009057 Homeobox-like domain superfamily DOE60_RS19480 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS19480 IPR018062 HTH domain AraC-type, conserved site DOE60_RS19480 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS19480 IPR018771 PocR domain DOE60_RS19485 IPR029062 Class I glutamine amidotransferase-like DOE60_RS19485 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE60_RS19485 IPR017929 CobB/CobQ glutamine amidotransferase DOE60_RS19485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19485 IPR011698 CobB/CobQ-like glutamine amidotransferase DOE60_RS19485 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA DOE60_RS19490 IPR004485 Cobalamin biosynthesis CobD/CbiB DOE60_RS19495 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily DOE60_RS19495 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC DOE60_RS19500 IPR036074 CbiD superfamily DOE60_RS19500 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD DOE60_RS19505 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS19505 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase DOE60_RS19505 IPR000878 Tetrapyrrole methylase DOE60_RS19505 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS19510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS19510 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit DOE60_RS19510 IPR007848 Methyltransferase small domain DOE60_RS19515 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE60_RS19515 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS19515 IPR000878 Tetrapyrrole methylase DOE60_RS19515 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE60_RS19515 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS19515 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase DOE60_RS19520 IPR038029 GbiG N-terminal domain superfamily DOE60_RS19520 IPR002750 CobE/GbiG C-terminal domain DOE60_RS19520 IPR021744 Cobalamin synthesis G, N-terminal DOE60_RS19520 IPR021745 Cobalamin biosynthesis central region DOE60_RS19520 IPR036518 CobE/GbiG C-terminal domain superfamily DOE60_RS19525 IPR006363 Precorrin-3B C17-methyltransferase domain DOE60_RS19525 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE60_RS19525 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS19525 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS19525 IPR000878 Tetrapyrrole methylase DOE60_RS19530 IPR003723 Precorrin-6x reductase DOE60_RS19535 IPR010388 Anaerobic cobalt chelatase DOE60_RS19540 IPR000878 Tetrapyrrole methylase DOE60_RS19540 IPR035996 Tetrapyrrole methylase superfamily DOE60_RS19540 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE60_RS19540 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE60_RS19540 IPR006364 Precorrin-2 C(20)-methyltransferase domain DOE60_RS19540 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE60_RS19540 IPR012382 Precorrin-2 C(20)-methyltransferase DOE60_RS19545 IPR002751 Metal transport protein CbiM/NikMN DOE60_RS19545 IPR018024 Cobalamin (vitamin B12) transport protein CbiM DOE60_RS19550 IPR003705 Cobalt transport protein CbiN DOE60_RS19555 IPR012809 Cobalt ECF transporter T component CbiQ DOE60_RS19555 IPR003339 ABC/ECF transporter, transmembrane component DOE60_RS19560 IPR005876 Cobalt transport protein ATP-binding subunit DOE60_RS19560 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19560 IPR015856 ABC transporter, CbiO/EcfA subunit DOE60_RS19560 IPR017871 ABC transporter, conserved site DOE60_RS19560 IPR003439 ABC transporter-like DOE60_RS19560 IPR003593 AAA+ ATPase domain DOE60_RS19565 IPR017929 CobB/CobQ glutamine amidotransferase DOE60_RS19565 IPR011698 CobB/CobQ-like glutamine amidotransferase DOE60_RS19565 IPR029062 Class I glutamine amidotransferase-like DOE60_RS19565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19565 IPR004459 Cobyric acid synthase CobQ DOE60_RS19565 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 DOE60_RS19570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19570 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase DOE60_RS19575 IPR003805 Adenosylcobinamide-GDP ribazoletransferase DOE60_RS19580 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily DOE60_RS19580 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DOE60_RS19580 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DOE60_RS19580 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DOE60_RS19585 IPR005490 L,D-transpeptidase catalytic domain DOE60_RS19585 IPR041597 L,D-transpeptidase C-terminal domain DOE60_RS19585 IPR038063 L,D-transpeptidase catalytic domain-like DOE60_RS19595 IPR002528 Multi antimicrobial extrusion protein DOE60_RS19620 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily DOE60_RS19620 IPR018953 AMP nucleoside phosphorylase, N-terminal DOE60_RS19620 IPR000845 Nucleoside phosphorylase domain DOE60_RS19620 IPR035994 Nucleoside phosphorylase superfamily DOE60_RS19620 IPR011271 AMP nucleosidase DOE60_RS19625 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS19625 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS19625 IPR020471 Aldo/keto reductase DOE60_RS19640 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS19640 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS19640 IPR000847 Transcription regulator HTH, LysR DOE60_RS19640 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain DOE60_RS19640 IPR005119 LysR, substrate-binding DOE60_RS19645 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS19645 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS19645 IPR001845 HTH ArsR-type DNA-binding domain DOE60_RS19645 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS19665 IPR005119 LysR, substrate-binding DOE60_RS19665 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS19665 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS19665 IPR000847 Transcription regulator HTH, LysR DOE60_RS19670 IPR018490 Cyclic nucleotide-binding-like DOE60_RS19670 IPR034719 Inhibitor of hydrogen peroxide resistance DOE60_RS19670 IPR041687 IprA, winged helix-turn-helix domain DOE60_RS19675 IPR003991 Pertactin virulence factor family DOE60_RS19675 IPR005546 Autotransporter beta-domain DOE60_RS19675 IPR011050 Pectin lyase fold/virulence factor DOE60_RS19675 IPR006315 Outer membrane autotransporter barrel DOE60_RS19675 IPR036709 Autotransporter beta-domain superfamily DOE60_RS19675 IPR004899 Pertactin, central region DOE60_RS19695 IPR018671 Protein of unknown function DUF2138 DOE60_RS19700 IPR009558 Protein of unknown function DUF1175 DOE60_RS19705 IPR001599 Alpha-2-macroglobulin DOE60_RS19705 IPR011625 Alpha-2-macroglobulin, bait region domain DOE60_RS19705 IPR002890 Macroglobulin domain DOE60_RS19705 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOE60_RS19710 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS19710 IPR018748 Domain of unknown function DUF2300, secreted DOE60_RS19710 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal DOE60_RS19715 IPR019220 Domain of unknown function DUF2135 DOE60_RS19715 IPR012039 Uncharacterised conserved protein UCP012281 DOE60_RS19720 IPR005322 Peptidase C69, dipeptidase A DOE60_RS19730 IPR024079 Metallopeptidase, catalytic domain superfamily DOE60_RS19730 IPR010384 MtfA family DOE60_RS19730 IPR042252 MtfA, N-terminal DOE60_RS19755 IPR015927 Peptidase S24/S26A/S26B/S26C DOE60_RS19755 IPR036286 LexA/Signal peptidase-like superfamily DOE60_RS19755 IPR039418 LexA-like DOE60_RS19755 IPR006197 Peptidase S24, LexA-like DOE60_RS19760 IPR001126 UmuC domain DOE60_RS19760 IPR025188 Domain of unknown function DUF4113 DOE60_RS19760 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOE60_RS19760 IPR017961 DNA polymerase, Y-family, little finger domain DOE60_RS19770 IPR012156 Cold shock, CspA DOE60_RS19770 IPR011129 Cold shock domain DOE60_RS19770 IPR019844 Cold-shock (CSD) domain DOE60_RS19770 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS19770 IPR002059 Cold-shock protein, DNA-binding DOE60_RS19785 IPR023614 Porin domain superfamily DOE60_RS19785 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS19785 IPR001702 Porin, Gram-negative type DOE60_RS19785 IPR001897 Porin, gammaproteobacterial DOE60_RS19785 IPR033900 Porin domain, Gram-negative type DOE60_RS19795 IPR003607 HD/PDEase domain DOE60_RS19795 IPR006674 HD domain DOE60_RS19800 IPR001525 C-5 cytosine methyltransferase DOE60_RS19800 IPR040743 DNA methylase N-terminal domain DOE60_RS19800 IPR018117 DNA methylase, C-5 cytosine-specific, active site DOE60_RS19800 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site DOE60_RS19800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS19805 IPR004603 DNA mismatch endonuclease vsr DOE60_RS19805 IPR011335 Restriction endonuclease type II-like DOE60_RS19810 IPR000620 EamA domain DOE60_RS19810 IPR004779 Carboxylate/Amino Acid/Amine Transporter DOE60_RS19815 IPR008526 Inner membrane protein YedI DOE60_RS19820 IPR019226 Protein of unknown function DUF2158 DOE60_RS19825 IPR029787 Nucleotide cyclase DOE60_RS19825 IPR000160 GGDEF domain DOE60_RS19825 IPR033416 Periplasmic sensor domain CHASE7 DOE60_RS19830 IPR012815 Mannosyl-3-phosphoglycerate phosphatase DOE60_RS19830 IPR036412 HAD-like superfamily DOE60_RS19830 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS19830 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP DOE60_RS19830 IPR023214 HAD superfamily DOE60_RS19835 IPR019669 Uncharacterised bacterial stress protein YodD DOE60_RS19840 IPR019717 Dextransucrase DSRB DOE60_RS19845 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS19845 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS19845 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS19845 IPR030866 Transcriptional regulatory protein RcsA DOE60_RS19850 IPR002010 Type III secretion system inner membrane R protein DOE60_RS19850 IPR006303 Flagellar biosynthesis protein FliR DOE60_RS19855 IPR002191 Bacterial export protein family 3 DOE60_RS19855 IPR006305 Flagellar biosynthesis protein FliQ DOE60_RS19860 IPR005838 Type III secretion system inner membrane P protein DOE60_RS19860 IPR005837 Flagellar transport protein FliP DOE60_RS19865 IPR022781 Flagellar biosynthesis protein, FliO DOE60_RS19870 IPR036429 SpoA-like superfamily DOE60_RS19870 IPR012826 Flagellar motor switch FliN DOE60_RS19870 IPR031576 Flagellar motor switch protein FliN, N-terminal DOE60_RS19870 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOE60_RS19870 IPR001543 Surface presentation of antigen (SpoA) DOE60_RS19875 IPR001689 Flagellar motor switch protein FliM DOE60_RS19875 IPR036429 SpoA-like superfamily DOE60_RS19875 IPR001543 Surface presentation of antigen (SpoA) DOE60_RS19875 IPR028976 CheC-like superfamily DOE60_RS19880 IPR005503 Flagellar basal body-associated protein FliL DOE60_RS19885 IPR038610 FliK-like, C-terminal domain superfamily DOE60_RS19885 IPR021136 Flagellar hook-length control protein-like, C-terminal DOE60_RS19885 IPR001635 Flagellar hook-length control protein FliK DOE60_RS19890 IPR018006 Flagellar FliJ, proteobacteria DOE60_RS19890 IPR012823 Flagellar export FliJ DOE60_RS19895 IPR005714 ATPase, type III secretion system, FliI/YscN DOE60_RS19895 IPR032463 ATPase, type III secretion system, FliI DOE60_RS19895 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS19895 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE60_RS19895 IPR020005 Flagellar export ATPase FliI, clade 1 DOE60_RS19895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19895 IPR040627 T3SS EscN ATPase, C-terminal DOE60_RS19895 IPR003593 AAA+ ATPase domain DOE60_RS19900 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DOE60_RS19900 IPR000563 Flagellar assembly protein FliH DOE60_RS19905 IPR032779 Flagellar motor switch protein FliG, middle domain DOE60_RS19905 IPR011002 Flagellar motor switch protein FliG, alpha-helical DOE60_RS19905 IPR023087 Flagellar motor switch protein FliG, C-terminal DOE60_RS19905 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DOE60_RS19905 IPR000090 Flagellar motor switch protein FliG DOE60_RS19910 IPR006182 Secretory protein YscJ/FliF DOE60_RS19910 IPR000067 Flagellar M-ring protein FliF DOE60_RS19910 IPR013556 Flagellar M-ring C-terminal DOE60_RS19915 IPR001624 Flagellar hook-basal body complex protein FliE DOE60_RS19925 IPR001455 TusA-like domain DOE60_RS19925 IPR036868 TusA-like domain superfamily DOE60_RS19930 IPR007272 Sulphur transport domain DOE60_RS19935 IPR025596 YedD-like protein DOE60_RS19935 IPR038624 YedD-like superfamily DOE60_RS19950 IPR014981 Flagellin D3 DOE60_RS19950 IPR001029 Flagellin, D0/D1 domain DOE60_RS19950 IPR001492 Flagellin DOE60_RS19960 IPR000943 RNA polymerase sigma-70 DOE60_RS19960 IPR012845 RNA polymerase sigma factor, FliA/WhiG DOE60_RS19960 IPR013325 RNA polymerase sigma factor, region 2 DOE60_RS19960 IPR007627 RNA polymerase sigma-70 region 2 DOE60_RS19960 IPR028617 RNA polymerase sigma factor FliA DOE60_RS19960 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE60_RS19960 IPR007630 RNA polymerase sigma-70 region 4 DOE60_RS19960 IPR007624 RNA polymerase sigma-70 region 3 DOE60_RS19960 IPR014284 RNA polymerase sigma-70 like domain DOE60_RS19965 IPR022523 Flagellar regulator, FliZ DOE60_RS19965 IPR004107 Integrase, SAM-like, N-terminal DOE60_RS19970 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS19970 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS19970 IPR001320 Ionotropic glutamate receptor DOE60_RS19975 IPR023702 D-cysteine desulphhydrase, bacterial DOE60_RS19975 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DOE60_RS19975 IPR005966 D-cysteine desulfhydrase DOE60_RS19975 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS19975 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS19980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS19980 IPR035906 MetI-like superfamily DOE60_RS19980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS19985 IPR003439 ABC transporter-like DOE60_RS19985 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS19985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS19985 IPR003593 AAA+ ATPase domain DOE60_RS19985 IPR017871 ABC transporter, conserved site DOE60_RS19990 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS19990 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS19990 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DOE60_RS19990 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily DOE60_RS19990 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20005 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS20005 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS20005 IPR011006 CheY-like superfamily DOE60_RS20005 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS20010 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE60_RS20010 IPR038476 UvrC homology region 2 superfamily DOE60_RS20010 IPR001162 UvrC family homology region DOE60_RS20010 IPR004791 UvrABC system, subunit C DOE60_RS20010 IPR000305 GIY-YIG endonuclease DOE60_RS20010 IPR036876 UVR domain superfamily DOE60_RS20010 IPR001943 UVR domain DOE60_RS20010 IPR035901 GIY-YIG endonuclease superfamily DOE60_RS20010 IPR010994 RuvA domain 2-like DOE60_RS20015 IPR000462 CDP-alcohol phosphatidyltransferase DOE60_RS20015 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DOE60_RS20015 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial DOE60_RS20050 IPR004027 SEC-C motif DOE60_RS20050 IPR011978 Uncharacterised protein family UPF0149 DOE60_RS20050 IPR036255 YgfB-like superfamily DOE60_RS20055 IPR013059 Tryptophan/tyrosine transporter DOE60_RS20055 IPR013061 Tryptophan/tryrosine permease, conserved site DOE60_RS20055 IPR018227 Amino acid/polyamine transporter 2 DOE60_RS20060 IPR019620 Putative metal-binding protein DOE60_RS20065 IPR041719 Ferritin, prokaryotic-type DOE60_RS20065 IPR009078 Ferritin-like superfamily DOE60_RS20065 IPR009040 Ferritin-like diiron domain DOE60_RS20065 IPR012347 Ferritin-like DOE60_RS20065 IPR001519 Ferritin DOE60_RS20065 IPR008331 Ferritin/DPS protein domain DOE60_RS20070 IPR025731 YecR-like lipoprotein DOE60_RS20075 IPR020262 Uncharacterised protein family YecJ DOE60_RS20085 IPR009040 Ferritin-like diiron domain DOE60_RS20085 IPR009078 Ferritin-like superfamily DOE60_RS20085 IPR008331 Ferritin/DPS protein domain DOE60_RS20085 IPR041719 Ferritin, prokaryotic-type DOE60_RS20085 IPR012347 Ferritin-like DOE60_RS20085 IPR001519 Ferritin DOE60_RS20100 IPR001851 ABC transporter, permease DOE60_RS20105 IPR003337 Trehalose-phosphatase DOE60_RS20105 IPR023214 HAD superfamily DOE60_RS20105 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE60_RS20105 IPR036412 HAD-like superfamily DOE60_RS20110 IPR012766 Alpha,alpha-trehalose-phosphate synthase DOE60_RS20110 IPR001830 Glycosyl transferase, family 20 DOE60_RS20115 IPR006016 UspA DOE60_RS20115 IPR006015 Universal stress protein A family DOE60_RS20115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS20125 IPR036194 Flagellar transcriptional activator FlhD superfamily DOE60_RS20125 IPR023559 Flagellar transcriptional activator FlhD DOE60_RS20130 IPR007944 Flagellar transcriptional activator FlhC DOE60_RS20135 IPR022522 Flagellar motor stator, MotA DOE60_RS20135 IPR000540 Flagellar motor protein MotA, conserved site DOE60_RS20135 IPR002898 MotA/TolQ/ExbB proton channel DOE60_RS20140 IPR006665 OmpA-like domain DOE60_RS20140 IPR036737 OmpA-like domain superfamily DOE60_RS20140 IPR025713 Motility protein B, N-terminal domain DOE60_RS20145 IPR005467 Histidine kinase domain DOE60_RS20145 IPR015162 CheY binding DOE60_RS20145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS20145 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS20145 IPR004105 Histidine kinase CheA-like, homodimeric domain DOE60_RS20145 IPR036641 HPT domain superfamily DOE60_RS20145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS20145 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE60_RS20145 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOE60_RS20145 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS20145 IPR036061 CheW-like domain superfamily DOE60_RS20145 IPR035891 CheY-binding domain of CheA DOE60_RS20145 IPR002545 CheW-like domain DOE60_RS20150 IPR002545 CheW-like domain DOE60_RS20150 IPR036061 CheW-like domain superfamily DOE60_RS20150 IPR039315 Chemotaxis protein CheW DOE60_RS20155 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS20155 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS20155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS20155 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS20155 IPR003660 HAMP domain DOE60_RS20155 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS20160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20160 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DOE60_RS20160 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOE60_RS20160 IPR000780 MCP methyltransferase, CheR-type DOE60_RS20160 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOE60_RS20160 IPR026024 Chemotaxis protein methyltransferase CheR DOE60_RS20165 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DOE60_RS20165 IPR035909 Methylesterase CheB, C-terminal DOE60_RS20165 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS20165 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOE60_RS20165 IPR011006 CheY-like superfamily DOE60_RS20170 IPR011006 CheY-like superfamily DOE60_RS20170 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS20175 IPR007439 Chemotaxis phosphatase, CheZ DOE60_RS20180 IPR006136 Flagellar biosynthetic protein FlhB DOE60_RS20180 IPR006135 Type III secretion system substrate exporter DOE60_RS20180 IPR029025 Type III secretion system substrate exporter, C-terminal DOE60_RS20190 IPR009420 Flagellar protein FlhE DOE60_RS20195 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS20195 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS20195 IPR010905 Glycosyl hydrolase, family 88 DOE60_RS20200 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS20200 IPR017790 Penicillin-binding protein 2 DOE60_RS20200 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS20200 IPR005311 Penicillin-binding protein, dimerisation domain DOE60_RS20200 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE60_RS20205 IPR001278 Arginine-tRNA ligase DOE60_RS20205 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS20205 IPR005148 Arginyl tRNA synthetase N-terminal domain DOE60_RS20205 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily DOE60_RS20205 IPR035684 Arginyl-tRNA synthetase, catalytic core domain DOE60_RS20205 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE60_RS20205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS20205 IPR008909 DALR anticodon binding DOE60_RS20210 IPR010393 Protein of unknown function DUF991 DOE60_RS20210 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE60_RS20215 IPR005627 Copper homeostasis protein CutC DOE60_RS20215 IPR023648 Copper homeostasis CutC domain DOE60_RS20215 IPR036822 Copper homeostasis (CutC) domain superfamily DOE60_RS20225 IPR027555 tRNA (mo5U34)-methyltransferase-like DOE60_RS20225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20225 IPR010017 tRNA U34 carboxymethyltransferase DOE60_RS20230 IPR005271 Carboxy-S-adenosyl-L-methionine synthase DOE60_RS20230 IPR041698 Methyltransferase domain 25 DOE60_RS20230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20235 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DOE60_RS20235 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DOE60_RS20240 IPR036520 UPF0759 superfamily DOE60_RS20240 IPR002763 Protein of unknown function DUF72 DOE60_RS20245 IPR000868 Isochorismatase-like DOE60_RS20245 IPR036380 Isochorismatase-like superfamily DOE60_RS20250 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE60_RS20250 IPR029351 GAD domain DOE60_RS20250 IPR004115 GAD-like domain superfamily DOE60_RS20250 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOE60_RS20250 IPR004524 Aspartate-tRNA ligase, type 1 DOE60_RS20250 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS20250 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE60_RS20250 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS20255 IPR003564 Dihydroneopterin triphosphate diphosphatase DOE60_RS20255 IPR020084 NUDIX hydrolase, conserved site DOE60_RS20255 IPR000086 NUDIX hydrolase domain DOE60_RS20255 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS20260 IPR002876 Transcriptional regulator TACO1-like DOE60_RS20260 IPR026564 Transcriptional regulator TACO1-like, domain 3 DOE60_RS20260 IPR029072 YebC-like DOE60_RS20260 IPR017856 Integrase-like, N-terminal DOE60_RS20265 IPR012337 Ribonuclease H-like superfamily DOE60_RS20265 IPR036397 Ribonuclease H superfamily DOE60_RS20265 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site DOE60_RS20265 IPR002176 Crossover junction endodeoxyribonuclease RuvC DOE60_RS20270 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DOE60_RS20270 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS20280 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DOE60_RS20280 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE60_RS20280 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS20280 IPR036267 RuvA, C-terminal domain superfamily DOE60_RS20280 IPR011114 Holliday junction DNA helicase RuvA, C-terminal DOE60_RS20280 IPR000085 Bacterial DNA recombination protein RuvA DOE60_RS20280 IPR010994 RuvA domain 2-like DOE60_RS20285 IPR004605 DNA helicase, Holliday junction RuvB-type DOE60_RS20285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20285 IPR008823 RuvB C-terminal winged helix domain DOE60_RS20285 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20285 IPR008824 RuvB-like P-loop domain DOE60_RS20285 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS20285 IPR041445 RuvB, AAA lid domain DOE60_RS20285 IPR003593 AAA+ ATPase domain DOE60_RS20290 IPR037294 ABC transporter, BtuC-like DOE60_RS20290 IPR001626 ABC transporter, TroCD-like DOE60_RS20295 IPR003439 ABC transporter-like DOE60_RS20295 IPR003593 AAA+ ATPase domain DOE60_RS20295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20295 IPR017882 Zinc import ATP-binding protein ZnuC DOE60_RS20300 IPR006128 Adhesion lipoprotein DOE60_RS20300 IPR006127 Periplasmic solute binding protein, ZnuA-like DOE60_RS20300 IPR035520 High-affinity zinc uptake system protein ZnuA DOE60_RS20305 IPR016047 Peptidase M23 DOE60_RS20305 IPR013731 Opacity-associated protein A, N-terminal DOE60_RS20305 IPR018392 LysM domain DOE60_RS20305 IPR011055 Duplicated hybrid motif DOE60_RS20315 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE60_RS20315 IPR011921 Lipid A biosynthesis myristoyltransferase DOE60_RS20320 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS20320 IPR015795 Pyruvate kinase, C-terminal DOE60_RS20320 IPR001697 Pyruvate kinase DOE60_RS20320 IPR036918 Pyruvate kinase, C-terminal domain superfamily DOE60_RS20320 IPR015806 Pyruvate kinase, insert domain superfamily DOE60_RS20320 IPR015793 Pyruvate kinase, barrel DOE60_RS20320 IPR018209 Pyruvate kinase, active site DOE60_RS20320 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS20320 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE60_RS20325 IPR009057 Homeobox-like domain superfamily DOE60_RS20325 IPR000281 Helix-turn-helix protein RpiR DOE60_RS20325 IPR035472 RpiR-like, SIS domain DOE60_RS20325 IPR001347 Sugar isomerase (SIS) DOE60_RS20325 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20335 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DOE60_RS20335 IPR036291 NAD(P)-binding domain superfamily DOE60_RS20335 IPR001282 Glucose-6-phosphate dehydrogenase DOE60_RS20335 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DOE60_RS20335 IPR019796 Glucose-6-phosphate dehydrogenase, active site DOE60_RS20340 IPR037237 IlvD/EDD, N-terminal domain DOE60_RS20340 IPR004786 6-phosphogluconate dehydratase DOE60_RS20340 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DOE60_RS20340 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DOE60_RS20340 IPR042096 Dihydroxy-acid dehydratase, C-terminal DOE60_RS20345 IPR031337 KDPG/KHG aldolase, active site 1 DOE60_RS20345 IPR013785 Aldolase-type TIM barrel DOE60_RS20345 IPR000887 KDPG/KHG aldolase DOE60_RS20345 IPR031338 KDPG/KHG aldolase, active site 2 DOE60_RS20350 IPR011761 ATP-grasp fold DOE60_RS20350 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOE60_RS20350 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS20350 IPR016185 Pre-ATP-grasp domain superfamily DOE60_RS20350 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DOE60_RS20350 IPR011054 Rudiment single hybrid motif DOE60_RS20355 IPR038627 YebG-like superfamily DOE60_RS20355 IPR009813 Uncharacterised protein family YebG DOE60_RS20360 IPR025603 YebF/Colicin-M immunity protein DOE60_RS20360 IPR038703 YebF/Cmi superfamily DOE60_RS20360 IPR020236 Uncharacterised protein family YebF DOE60_RS20365 IPR007486 Inner membrane protein YebE DOE60_RS20365 IPR029024 TerB-like DOE60_RS20370 IPR002471 Peptidase S9, serine active site DOE60_RS20370 IPR023302 Peptidase S9A, N-terminal domain DOE60_RS20370 IPR029058 Alpha/Beta hydrolase fold DOE60_RS20370 IPR002470 Peptidase S9A, prolyl oligopeptidase DOE60_RS20370 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOE60_RS20375 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE60_RS20375 IPR012337 Ribonuclease H-like superfamily DOE60_RS20375 IPR036397 Ribonuclease H superfamily DOE60_RS20380 IPR003010 Carbon-nitrogen hydrolase DOE60_RS20380 IPR036526 Carbon-nitrogen hydrolase superfamily DOE60_RS20385 IPR009052 DNA polymerase III-theta, bacterial DOE60_RS20385 IPR036745 DNA polymerase III-theta superfamily DOE60_RS20390 IPR032694 Copper transport protein C/D DOE60_RS20390 IPR007348 CopC domain DOE60_RS20390 IPR014756 Immunoglobulin E-set DOE60_RS20395 IPR008457 Copper resistance protein D DOE60_RS20395 IPR032694 Copper transport protein C/D DOE60_RS20400 IPR019648 Protein of unknown function DUF2511 DOE60_RS20435 IPR036696 YdfO-like superfamily DOE60_RS20435 IPR009833 Uncharacterised protein DUF1398 DOE60_RS20440 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain DOE60_RS20440 IPR035949 SopE-like, GEF domain superfamily DOE60_RS20440 IPR005414 Guanine nucleotide exchange factor SopE DOE60_RS20440 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain DOE60_RS20450 IPR029052 Metallo-dependent phosphatase-like DOE60_RS20450 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase DOE60_RS20450 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE60_RS20455 IPR009954 Protein of unknown function DUF1482 DOE60_RS20460 IPR009950 Protein of unknown function DUF1480 DOE60_RS20465 IPR023545 rRNA small subunit methyltransferase F DOE60_RS20465 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal DOE60_RS20465 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DOE60_RS20465 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain DOE60_RS20465 IPR011023 Nop2p DOE60_RS20465 IPR023267 RNA (C5-cytosine) methyltransferase DOE60_RS20465 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DOE60_RS20465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20470 IPR003399 Mce/MlaD DOE60_RS20475 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DOE60_RS20475 IPR011031 Multihaem cytochrome DOE60_RS20475 IPR007498 Intermembrane transport protein PqiA-like DOE60_RS20480 IPR029016 GAF-like domain superfamily DOE60_RS20480 IPR000614 Free Met sulfoxide reductase conserved site DOE60_RS20480 IPR003018 GAF domain DOE60_RS20490 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS20490 IPR001478 PDZ domain DOE60_RS20490 IPR036034 PDZ superfamily DOE60_RS20490 IPR004447 C-terminal-processing peptidase S41A DOE60_RS20490 IPR005151 Tail specific protease DOE60_RS20490 IPR020992 Tail specific protease, C-terminal DOE60_RS20490 IPR040573 Tail specific protease, N-terminal domain DOE60_RS20495 IPR001915 Peptidase M48 DOE60_RS20495 IPR022919 Peptidase M48, protease HtpX, putative DOE60_RS20500 IPR011701 Major facilitator superfamily DOE60_RS20500 IPR020846 Major facilitator superfamily domain DOE60_RS20500 IPR036259 MFS transporter superfamily DOE60_RS20505 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS20505 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20505 IPR014757 Transcription regulator IclR, C-terminal DOE60_RS20505 IPR011991 ArsR-like helix-turn-helix domain DOE60_RS20505 IPR029016 GAF-like domain superfamily DOE60_RS20505 IPR005471 Transcription regulator IclR, N-terminal DOE60_RS20510 IPR025611 YobH-like protein DOE60_RS20515 IPR020907 PhoP/PhoQ regulator MgrB DOE60_RS20520 IPR025594 YebO-like protein DOE60_RS20525 IPR019672 Protein of unknown function DUF2627 DOE60_RS20530 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS20530 IPR019844 Cold-shock (CSD) domain DOE60_RS20530 IPR002059 Cold-shock protein, DNA-binding DOE60_RS20530 IPR011129 Cold shock domain DOE60_RS20530 IPR012156 Cold shock, CspA DOE60_RS20535 IPR005311 Penicillin-binding protein, dimerisation domain DOE60_RS20535 IPR001460 Penicillin-binding protein, transpeptidase DOE60_RS20535 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS20535 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DOE60_RS20535 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE60_RS20540 IPR025714 Methyltransferase domain DOE60_RS20540 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted DOE60_RS20540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20545 IPR003810 Putative manganese efflux pump DOE60_RS20545 IPR022929 Putative manganese efflux pump MntP DOE60_RS20555 IPR009328 Protein of unknown function DUF986 DOE60_RS20560 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE60_RS20565 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit DOE60_RS20570 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE60_RS20570 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE60_RS20570 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE60_RS20570 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup DOE60_RS20570 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE60_RS20570 IPR013789 Phosphotransferase system, mannose family IIA component DOE60_RS20570 IPR004701 Phosphotransferase system, mannose-type IIA component DOE60_RS20580 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS20580 IPR000644 CBS domain DOE60_RS20580 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS20580 IPR005496 Integral membrane protein TerC DOE60_RS20580 IPR005170 Transporter-associated domain DOE60_RS20590 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE60_RS20590 IPR001633 EAL domain DOE60_RS20590 IPR035919 EAL domain superfamily DOE60_RS20595 IPR029009 Allosteric substrate binding domain superfamily DOE60_RS20595 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE60_RS20595 IPR005130 Serine dehydratase-like, alpha subunit DOE60_RS20595 IPR005131 Serine dehydratase beta chain DOE60_RS20600 IPR000086 NUDIX hydrolase domain DOE60_RS20600 IPR000059 NUDIX hydrolase, NudL, conserved site DOE60_RS20600 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS20600 IPR023735 Uncharacterised nudix hydrolase NudL DOE60_RS20605 IPR019999 Anthranilate synthase component I-like DOE60_RS20605 IPR006805 Anthranilate synthase component I, N-terminal DOE60_RS20605 IPR015890 Chorismate-utilising enzyme, C-terminal DOE60_RS20605 IPR005801 ADC synthase DOE60_RS20605 IPR005802 Aminodeoxychorismate synthase, component I DOE60_RS20610 IPR005371 Uncharacterised protein family UPF0181 DOE60_RS20615 IPR019897 RidA, conserved site DOE60_RS20615 IPR035959 RutC-like superfamily DOE60_RS20615 IPR035709 RutC family, YoaB-like DOE60_RS20615 IPR006175 YjgF/YER057c/UK114 family DOE60_RS20620 IPR006555 ATP-dependent helicase, C-terminal DOE60_RS20620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20620 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS20620 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOE60_RS20620 IPR006935 Helicase/UvrB, N-terminal DOE60_RS20625 IPR000905 Gcp-like domain DOE60_RS20625 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB DOE60_RS20630 IPR004658 Outer membrane lipoprotein Slp DOE60_RS20640 IPR042099 AMP-dependent synthetase-like superfamily DOE60_RS20640 IPR000873 AMP-dependent synthetase/ligase DOE60_RS20640 IPR020845 AMP-binding, conserved site DOE60_RS20640 IPR025110 AMP-binding enzyme, C-terminal domain DOE60_RS20645 IPR012337 Ribonuclease H-like superfamily DOE60_RS20645 IPR006292 Ribonuclease D DOE60_RS20645 IPR002121 HRDC domain DOE60_RS20645 IPR010997 HRDC-like superfamily DOE60_RS20645 IPR002562 3'-5' exonuclease domain DOE60_RS20645 IPR036397 Ribonuclease H superfamily DOE60_RS20650 IPR036707 Cell division topological specificity factor MinE superfamily DOE60_RS20650 IPR005527 Cell division topological specificity factor MinE DOE60_RS20655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20655 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE60_RS20655 IPR025501 ATP binding protein MinD DOE60_RS20655 IPR010223 ATP binding protein MinD, bacterial-type DOE60_RS20660 IPR005526 Septum formation inhibitor MinC, C-terminal DOE60_RS20660 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily DOE60_RS20660 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal DOE60_RS20660 IPR007874 Septum formation inhibitor MinC, N-terminal DOE60_RS20660 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily DOE60_RS20660 IPR013033 Septum formation inhibitor MinC DOE60_RS20665 IPR038068 YcgL-like superfamily DOE60_RS20665 IPR027354 YcgL domain DOE60_RS20670 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE60_RS20670 IPR011234 Fumarylacetoacetase-like, C-terminal DOE60_RS20675 IPR008228 Uncharacterised conserved protein UCP006173 DOE60_RS20675 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE60_RS20685 IPR012563 Gns DOE60_RS20695 IPR003752 Disulphide bond formation protein DsbB/BdbC DOE60_RS20695 IPR022920 Disulphide bond formation protein DsbB DOE60_RS20695 IPR023380 DsbB-like superfamily DOE60_RS20700 IPR004671 Na+/H+ antiporter NhaB DOE60_RS20705 IPR014178 Fatty acid response transcription factor FadR DOE60_RS20705 IPR028374 FadR, C-terminal domain DOE60_RS20705 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS20705 IPR000524 Transcription regulator HTH, GntR DOE60_RS20705 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20705 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS20710 IPR007390 Sporulation stage V, protein R DOE60_RS20715 IPR006076 FAD dependent oxidoreductase DOE60_RS20715 IPR023080 D-amino acid dehydrogenase DadA DOE60_RS20715 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS20720 IPR000821 Alanine racemase DOE60_RS20720 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DOE60_RS20720 IPR001608 Alanine racemase, N-terminal DOE60_RS20720 IPR029066 PLP-binding barrel DOE60_RS20720 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE60_RS20720 IPR011079 Alanine racemase, C-terminal DOE60_RS20725 IPR005170 Transporter-associated domain DOE60_RS20725 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE60_RS20725 IPR006037 Regulator of K+ conductance, C-terminal DOE60_RS20725 IPR023729 K(+)/H(+) antiporter NhaP2 DOE60_RS20725 IPR030151 K(+)/H(+) antiporter NhaP DOE60_RS20725 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS20725 IPR038770 Sodium/solute symporter superfamily DOE60_RS20725 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE60_RS20725 IPR006153 Cation/H+ exchanger DOE60_RS20730 IPR040921 LD-carboxypeptidase, C-terminal DOE60_RS20730 IPR029062 Class I glutamine amidotransferase-like DOE60_RS20730 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE60_RS20730 IPR003507 Peptidase family S66 DOE60_RS20730 IPR040449 LD-carboxypeptidase, N-terminal DOE60_RS20730 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DOE60_RS20735 IPR000189 Prokaryotic transglycosylase, active site DOE60_RS20735 IPR023346 Lysozyme-like domain superfamily DOE60_RS20735 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A DOE60_RS20735 IPR008258 Transglycosylase SLT domain 1 DOE60_RS20740 IPR012349 FMN-binding split barrel DOE60_RS20740 IPR009875 PilZ domain DOE60_RS20740 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DOE60_RS20740 IPR023787 Type III secretion system flagellar brake protein YcgR DOE60_RS20745 IPR007341 Transglycosylase-associated protein DOE60_RS20750 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS20750 IPR018232 Glycoside hydrolase, family 37, conserved site DOE60_RS20750 IPR001661 Glycoside hydrolase, family 37 DOE60_RS20750 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS20750 IPR023720 Trehalase, periplasmic DOE60_RS20755 IPR014362 Glutamate dehydrogenase DOE60_RS20755 IPR036291 NAD(P)-binding domain superfamily DOE60_RS20755 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DOE60_RS20755 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DOE60_RS20755 IPR033524 Leu/Phe/Val dehydrogenases active site DOE60_RS20755 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DOE60_RS20755 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DOE60_RS20760 IPR012994 Membrane bound YbgT-like DOE60_RS20765 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE60_RS20770 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE60_RS20775 IPR038527 HupH, C-terminal domain superfamily DOE60_RS20775 IPR006894 HupH hydrogenase expression protein, C-terminal DOE60_RS20780 IPR036249 Thioredoxin-like superfamily DOE60_RS20780 IPR010893 [NiFe]-hydrogenase maturation factor HyaE DOE60_RS20785 IPR000671 Peptidase A31 family DOE60_RS20785 IPR023430 Peptidase HybD-like domain superfamily DOE60_RS20785 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE60_RS20790 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS20790 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS20790 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit DOE60_RS20795 IPR001501 Nickel-dependent hydrogenase, large subunit DOE60_RS20795 IPR029014 [NiFe]-hydrogenase, large subunit DOE60_RS20795 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE60_RS20800 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE60_RS20800 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE60_RS20800 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS20800 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS20800 IPR001821 [NiFe]-hydrogenase, small subunit DOE60_RS20800 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE60_RS20800 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE60_RS20810 IPR012676 TGS-like DOE60_RS20810 IPR006073 GTP binding domain DOE60_RS20810 IPR023192 TGS-like domain superfamily DOE60_RS20810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20810 IPR004095 TGS DOE60_RS20810 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOE60_RS20810 IPR041706 YchF, N-terminal DOE60_RS20810 IPR012675 Beta-grasp domain superfamily DOE60_RS20810 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 DOE60_RS20810 IPR013029 YchF, C-terminal domain DOE60_RS20815 IPR001328 Peptidyl-tRNA hydrolase DOE60_RS20815 IPR018171 Peptidyl-tRNA hydrolase, conserved site DOE60_RS20815 IPR036416 Peptidyl-tRNA hydrolase superfamily DOE60_RS20820 IPR019698 Protein of unknown function DUF2583 DOE60_RS20825 IPR036513 STAS domain superfamily DOE60_RS20825 IPR018045 Sulphate anion transporter, conserved site DOE60_RS20825 IPR011547 SLC26A/SulP transporter domain DOE60_RS20825 IPR001902 SLC26A/SulP transporter DOE60_RS20825 IPR002645 STAS domain DOE60_RS20830 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DOE60_RS20830 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DOE60_RS20830 IPR000836 Phosphoribosyltransferase domain DOE60_RS20830 IPR029057 Phosphoribosyltransferase-like DOE60_RS20830 IPR005946 Ribose-phosphate pyrophosphokinase DOE60_RS20830 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DOE60_RS20835 IPR036554 GHMP kinase, C-terminal domain superfamily DOE60_RS20835 IPR006204 GHMP kinase N-terminal domain DOE60_RS20835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE60_RS20835 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DOE60_RS20835 IPR020568 Ribosomal protein S5 domain 2-type fold DOE60_RS20835 IPR013750 GHMP kinase, C-terminal domain DOE60_RS20840 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOE60_RS20840 IPR004565 Outer membrane lipoprotein LolB DOE60_RS20845 IPR018214 Glutamyl-tRNA reductase, conserved site DOE60_RS20845 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase DOE60_RS20845 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain DOE60_RS20845 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal DOE60_RS20845 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily DOE60_RS20845 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily DOE60_RS20845 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE60_RS20845 IPR036291 NAD(P)-binding domain superfamily DOE60_RS20850 IPR005139 Peptide chain release factor DOE60_RS20850 IPR000352 Peptide chain release factor class I DOE60_RS20850 IPR004373 Peptide chain release factor 1 DOE60_RS20855 IPR004556 Methyltransferase HemK-like DOE60_RS20855 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE60_RS20855 IPR025714 Methyltransferase domain DOE60_RS20855 IPR040758 Release factor glutamine methyltransferase, N-terminal domain DOE60_RS20855 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific DOE60_RS20855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS20860 IPR007360 Invasion gene expression up-regulator, SirB DOE60_RS20865 IPR032698 Protein SirB1, N-terminal DOE60_RS20870 IPR006269 3-deoxy-8-phosphooctulonate synthase DOE60_RS20870 IPR013785 Aldolase-type TIM barrel DOE60_RS20870 IPR006218 DAHP synthetase I/KDSA DOE60_RS20880 IPR004713 Calcium/proton exchanger DOE60_RS20880 IPR004837 Sodium/calcium exchanger membrane region DOE60_RS20885 IPR037205 ChaB superfamily DOE60_RS20885 IPR009317 ChaB DOE60_RS20890 IPR013024 Gamma-glutamyl cyclotransferase-like DOE60_RS20890 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase DOE60_RS20890 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DOE60_RS20895 IPR003787 Sulphur relay, DsrE/F-like protein DOE60_RS20895 IPR027396 DsrEFH-like DOE60_RS20900 IPR024519 Inverse autotransporter, beta-domain DOE60_RS20900 IPR038177 Inverse autotransporter, beta-domain superfamily DOE60_RS20905 IPR011006 CheY-like superfamily DOE60_RS20905 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS20905 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS20905 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS20905 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS20910 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing DOE60_RS20910 IPR005467 Histidine kinase domain DOE60_RS20910 IPR042295 NarX-like, N-terminal domain superfamily DOE60_RS20910 IPR029095 NarX-like, N-terminal DOE60_RS20910 IPR003660 HAMP domain DOE60_RS20910 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS20910 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE60_RS20910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS20920 IPR036259 MFS transporter superfamily DOE60_RS20920 IPR011701 Major facilitator superfamily DOE60_RS20920 IPR004737 Nitrate transporter DOE60_RS20925 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS20925 IPR006656 Molybdopterin oxidoreductase DOE60_RS20925 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS20925 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS20925 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS20925 IPR006468 Nitrate reductase, alpha subunit DOE60_RS20925 IPR028189 Nitrate reductase, alpha subunit, N-terminal DOE60_RS20925 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS20925 IPR037943 Nitrate reductase alpha subunit-like, MopB domain DOE60_RS20930 IPR006547 Nitrate reductase, beta subunit DOE60_RS20930 IPR038262 Nitrate reductase beta, C-terminal domain superfamily DOE60_RS20930 IPR029263 Respiratory nitrate reductase beta, C-terminal DOE60_RS20930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS20935 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS20935 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 DOE60_RS20935 IPR003765 Nitrate reductase chaperone, NarJ DOE60_RS20935 IPR036411 TorD-like superfamily DOE60_RS20935 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 DOE60_RS20940 IPR036197 NarG-like superfamily DOE60_RS20940 IPR003816 Nitrate reductase, gamma subunit DOE60_RS20940 IPR023234 NarG-like domain DOE60_RS20965 IPR002376 Formyl transferase, N-terminal DOE60_RS20965 IPR002912 ACT domain DOE60_RS20965 IPR004810 Formyltetrahydrofolate deformylase DOE60_RS20965 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain DOE60_RS20965 IPR036477 Formyl transferase, N-terminal domain superfamily DOE60_RS20970 IPR023006 Uncharacterised protein family UPF0225 DOE60_RS20970 IPR004027 SEC-C motif DOE60_RS20970 IPR032710 NTF2-like domain superfamily DOE60_RS20975 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE60_RS20975 IPR001423 Lysophospholipase patatin, conserved site DOE60_RS20975 IPR002641 Patatin-like phospholipase domain DOE60_RS20980 IPR028616 Regulator of RpoS DOE60_RS20980 IPR011006 CheY-like superfamily DOE60_RS20980 IPR036457 PPM-type phosphatase domain superfamily DOE60_RS20980 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS20980 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS20985 IPR005835 Nucleotidyl transferase domain DOE60_RS20985 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DOE60_RS20985 IPR029044 Nucleotide-diphospho-sugar transferases DOE60_RS20990 IPR027444 Histone-like protein H-NS, C-terminal domain DOE60_RS20990 IPR027454 Histone-like protein H-NS, N-terminal DOE60_RS20990 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOE60_RS20990 IPR001801 Histone-like protein H-NS DOE60_RS20995 IPR020633 Thymidine kinase, conserved site DOE60_RS20995 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS20995 IPR001267 Thymidine kinase DOE60_RS21000 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS21000 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS21000 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS21000 IPR039697 Iron-type alcohol dehydrogenase-like DOE60_RS21000 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE60_RS21000 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE60_RS21000 IPR015590 Aldehyde dehydrogenase domain DOE60_RS21000 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain DOE60_RS21000 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase DOE60_RS21005 IPR002771 Multiple antibiotic resistance (MarC)-related DOE60_RS21015 IPR039424 Solute-binding protein family 5 DOE60_RS21015 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS21015 IPR000914 Solute-binding protein family 5 domain DOE60_RS21015 IPR023765 Solute-binding protein family 5, conserved site DOE60_RS21020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21020 IPR035906 MetI-like superfamily DOE60_RS21025 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS21025 IPR035906 MetI-like superfamily DOE60_RS21025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21030 IPR003439 ABC transporter-like DOE60_RS21030 IPR003593 AAA+ ATPase domain DOE60_RS21030 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS21030 IPR017871 ABC transporter, conserved site DOE60_RS21040 IPR028325 Voltage-gated potassium channel DOE60_RS21040 IPR018488 Cyclic nucleotide-binding, conserved site DOE60_RS21040 IPR000595 Cyclic nucleotide-binding domain DOE60_RS21040 IPR014710 RmlC-like jelly roll fold DOE60_RS21040 IPR005821 Ion transport domain DOE60_RS21040 IPR018490 Cyclic nucleotide-binding-like DOE60_RS21045 IPR007376 dsDNA mimic, putative DOE60_RS21045 IPR036763 Putative dsDNA mimic superfamily DOE60_RS21050 IPR025202 Phospholipase D-like domain DOE60_RS21050 IPR027379 Cardiolipin synthase N-terminal DOE60_RS21050 IPR030840 Cardiolipin synthase A DOE60_RS21050 IPR022924 Cardiolipin synthase DOE60_RS21050 IPR001736 Phospholipase D/Transphosphatidylase DOE60_RS21055 IPR005545 YCII-related DOE60_RS21055 IPR011008 Dimeric alpha-beta barrel DOE60_RS21060 IPR037682 TonB, C-terminal DOE60_RS21060 IPR003538 Gram-negative bacterial TonB protein DOE60_RS21060 IPR006260 TonB/TolA, C-terminal DOE60_RS21065 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DOE60_RS21065 IPR029069 HotDog domain superfamily DOE60_RS21065 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DOE60_RS21065 IPR006683 Thioesterase domain DOE60_RS21070 IPR006008 Intracellular septation protein A DOE60_RS21075 IPR009627 Uncharacterised protein family UPF0259 DOE60_RS21080 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE60_RS21085 IPR005618 Outer membrane protein, OmpW DOE60_RS21085 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS21090 IPR007760 Manganese catalase DOE60_RS21090 IPR009078 Ferritin-like superfamily DOE60_RS21090 IPR012347 Ferritin-like DOE60_RS21090 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain DOE60_RS21090 IPR027407 Manganese catalase, C-terminal DOE60_RS21095 IPR010287 Domain of unknown function DUF892 DOE60_RS21095 IPR012347 Ferritin-like DOE60_RS21095 IPR009078 Ferritin-like superfamily DOE60_RS21100 IPR012347 Ferritin-like DOE60_RS21100 IPR009078 Ferritin-like superfamily DOE60_RS21100 IPR010287 Domain of unknown function DUF892 DOE60_RS21105 IPR019626 Stress-induced protein, KGG, repeat DOE60_RS21110 IPR002028 Tryptophan synthase, alpha chain DOE60_RS21110 IPR018204 Tryptophan synthase, alpha chain, active site DOE60_RS21110 IPR011060 Ribulose-phosphate binding barrel DOE60_RS21110 IPR013785 Aldolase-type TIM barrel DOE60_RS21115 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE60_RS21115 IPR023026 Tryptophan synthase beta chain/beta chain-like DOE60_RS21115 IPR001926 Pyridoxal-phosphate dependent enzyme DOE60_RS21115 IPR006653 Tryptophan synthase, beta chain, conserved site DOE60_RS21115 IPR006654 Tryptophan synthase, beta chain DOE60_RS21120 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) DOE60_RS21120 IPR011060 Ribulose-phosphate binding barrel DOE60_RS21120 IPR001468 Indole-3-glycerol phosphate synthase, conserved site DOE60_RS21120 IPR013785 Aldolase-type TIM barrel DOE60_RS21120 IPR013798 Indole-3-glycerol phosphate synthase DOE60_RS21125 IPR000312 Glycosyl transferase, family 3 DOE60_RS21125 IPR017926 Glutamine amidotransferase DOE60_RS21125 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE60_RS21125 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE60_RS21125 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE60_RS21125 IPR029062 Class I glutamine amidotransferase-like DOE60_RS21125 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DOE60_RS21125 IPR005940 Anthranilate phosphoribosyl transferase DOE60_RS21130 IPR015890 Chorismate-utilising enzyme, C-terminal DOE60_RS21130 IPR005801 ADC synthase DOE60_RS21130 IPR019999 Anthranilate synthase component I-like DOE60_RS21130 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial DOE60_RS21130 IPR006805 Anthranilate synthase component I, N-terminal DOE60_RS21135 IPR013205 Leader peptide, tryptophan-operon DOE60_RS21140 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE60_RS21140 IPR004013 PHP domain DOE60_RS21140 IPR016195 Polymerase/histidinol phosphatase-like DOE60_RS21145 IPR006070 YrdC-like domain DOE60_RS21145 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE60_RS21150 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS21150 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE60_RS21150 IPR002942 RNA-binding S4 domain DOE60_RS21150 IPR036986 RNA-binding S4 domain superfamily DOE60_RS21150 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE60_RS21150 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS21155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21155 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DOE60_RS21160 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21160 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS21160 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS21165 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS21165 IPR002142 Peptidase S49 DOE60_RS21165 IPR013703 Peptidase S49, N-terminal proteobacteria DOE60_RS21170 IPR038191 YciN superfamily DOE60_RS21170 IPR019633 Protein of unknown function DUF2498 DOE60_RS21180 IPR034149 DNA topoisomerase 1, TOPRIM domain DOE60_RS21180 IPR006171 TOPRIM domain DOE60_RS21180 IPR028612 DNA topoisomerase I, type IA DOE60_RS21180 IPR023406 DNA topoisomerase, type IA, active site DOE60_RS21180 IPR000380 DNA topoisomerase, type IA DOE60_RS21180 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE60_RS21180 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type DOE60_RS21180 IPR005733 DNA topoisomerase I, bacterial-type DOE60_RS21180 IPR013498 DNA topoisomerase, type IA, zn finger DOE60_RS21180 IPR013497 DNA topoisomerase, type IA, central DOE60_RS21180 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DOE60_RS21180 IPR023405 DNA topoisomerase, type IA, core domain DOE60_RS21180 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE60_RS21180 IPR003601 DNA topoisomerase, type IA, domain 2 DOE60_RS21180 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE60_RS21185 IPR005119 LysR, substrate-binding DOE60_RS21185 IPR000847 Transcription regulator HTH, LysR DOE60_RS21185 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21185 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21205 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE60_RS21205 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE60_RS21205 IPR006249 Aconitase/Iron-responsive element-binding protein 2 DOE60_RS21205 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE60_RS21205 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOE60_RS21205 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE60_RS21205 IPR036008 Aconitase, iron-sulfur domain DOE60_RS21210 IPR036144 RibA-like superfamily DOE60_RS21210 IPR000926 GTP cyclohydrolase II, RibA DOE60_RS21210 IPR032677 GTP cyclohydrolase II DOE60_RS21215 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE60_RS21215 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE60_RS21225 IPR032906 Lipopolysaccharide assembly protein A DOE60_RS21225 IPR010445 Lipopolysaccharide assembly protein A domain DOE60_RS21230 IPR030865 Lipopolysaccharide assembly protein B DOE60_RS21230 IPR013026 Tetratricopeptide repeat-containing domain DOE60_RS21230 IPR019734 Tetratricopeptide repeat DOE60_RS21230 IPR011990 Tetratricopeptide-like helical domain superfamily DOE60_RS21230 IPR041166 LapB, rubredoxin metal binding domain DOE60_RS21235 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE60_RS21235 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DOE60_RS21235 IPR011060 Ribulose-phosphate binding barrel DOE60_RS21235 IPR013785 Aldolase-type TIM barrel DOE60_RS21235 IPR014732 Orotidine 5'-phosphate decarboxylase DOE60_RS21240 IPR036877 SUI1 domain superfamily DOE60_RS21240 IPR001950 SUI1 domain DOE60_RS21240 IPR005872 Archaeal/bacterial translation initiation factor SUI1 DOE60_RS21245 IPR008816 Glycine zipper 2TM domain DOE60_RS21250 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21250 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21250 IPR037171 NagB/RpiA transferase-like DOE60_RS21250 IPR001034 DeoR-type HTH domain DOE60_RS21250 IPR014036 DeoR C-terminal sensor domain DOE60_RS21250 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS21255 IPR020887 Uncharacterised protein family UPF0509 DOE60_RS21260 IPR035965 PAS domain superfamily DOE60_RS21260 IPR001633 EAL domain DOE60_RS21260 IPR035919 EAL domain superfamily DOE60_RS21260 IPR000160 GGDEF domain DOE60_RS21260 IPR029787 Nucleotide cyclase DOE60_RS21260 IPR000014 PAS domain DOE60_RS21270 IPR040476 RNase II/RNase R, cold shock domain DOE60_RS21270 IPR011804 Ribonuclease II DOE60_RS21270 IPR001900 Ribonuclease II/R DOE60_RS21270 IPR022966 Ribonuclease II/R, conserved site DOE60_RS21270 IPR004476 Ribonuclease II/ribonuclease R DOE60_RS21270 IPR003029 S1 domain DOE60_RS21270 IPR011129 Cold shock domain DOE60_RS21270 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS21270 IPR013223 Ribonuclease B, N-terminal OB domain DOE60_RS21275 IPR029032 AhpD-like DOE60_RS21280 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21280 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS21280 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) DOE60_RS21305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21305 IPR017871 ABC transporter, conserved site DOE60_RS21305 IPR003439 ABC transporter-like DOE60_RS21305 IPR003593 AAA+ ATPase domain DOE60_RS21310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE60_RS21310 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21310 IPR003439 ABC transporter-like DOE60_RS21310 IPR003593 AAA+ ATPase domain DOE60_RS21315 IPR035906 MetI-like superfamily DOE60_RS21315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21315 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS21330 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal DOE60_RS21330 IPR003346 Transposase, IS116/IS110/IS902 DOE60_RS21355 IPR008878 Transposase IS66, Orf2 DOE60_RS21385 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE60_RS21385 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE60_RS21385 IPR038270 SopA-like, catalytic domain superfamily DOE60_RS21400 IPR035906 MetI-like superfamily DOE60_RS21400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21405 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS21405 IPR039424 Solute-binding protein family 5 DOE60_RS21405 IPR023765 Solute-binding protein family 5, conserved site DOE60_RS21405 IPR000914 Solute-binding protein family 5 domain DOE60_RS21410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21410 IPR009057 Homeobox-like domain superfamily DOE60_RS21410 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS21410 IPR002197 DNA binding HTH domain, Fis-type DOE60_RS21410 IPR014317 Transcription activator PspF DOE60_RS21410 IPR003593 AAA+ ATPase domain DOE60_RS21410 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS21410 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS21415 IPR014319 Phage shock protein, PspA DOE60_RS21415 IPR007157 PspA/IM30 DOE60_RS21420 IPR009554 Phage shock protein B DOE60_RS21425 IPR007168 Phage shock protein, PspC, N-terminal DOE60_RS21425 IPR014320 Phage shock protein, PspC DOE60_RS21430 IPR014321 Phage shock protein, PspD DOE60_RS21435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS21435 IPR017853 Glycoside hydrolase superfamily DOE60_RS21435 IPR033746 Glucosylglycerate phosphorylase DOE60_RS21435 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related DOE60_RS21440 IPR006059 Bacterial extracellular solute-binding protein DOE60_RS21445 IPR035906 MetI-like superfamily DOE60_RS21445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21450 IPR035906 MetI-like superfamily DOE60_RS21455 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS21455 IPR011032 GroES-like superfamily DOE60_RS21455 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21460 IPR013022 Xylose isomerase-like, TIM barrel domain DOE60_RS21460 IPR036237 Xylose isomerase-like superfamily DOE60_RS21465 IPR000683 Oxidoreductase, N-terminal DOE60_RS21465 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21465 IPR004104 Oxidoreductase, C-terminal DOE60_RS21470 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS21470 IPR005194 Glycoside hydrolase family 65, C-terminal DOE60_RS21470 IPR005195 Glycoside hydrolase, family 65, central catalytic DOE60_RS21470 IPR005196 Glycoside hydrolase, family 65, N-terminal DOE60_RS21470 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DOE60_RS21470 IPR012341 Six-hairpin glycosidase-like superfamily DOE60_RS21470 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase DOE60_RS21470 IPR008928 Six-hairpin glycosidase superfamily DOE60_RS21475 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS21475 IPR010976 Beta-phosphoglucomutase hydrolase DOE60_RS21475 IPR010972 Beta-phosphoglucomutase DOE60_RS21475 IPR036412 HAD-like superfamily DOE60_RS21475 IPR006439 HAD hydrolase, subfamily IA DOE60_RS21475 IPR023214 HAD superfamily DOE60_RS21475 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS21480 IPR003593 AAA+ ATPase domain DOE60_RS21480 IPR003439 ABC transporter-like DOE60_RS21480 IPR017871 ABC transporter, conserved site DOE60_RS21480 IPR008995 Molybdate/tungstate binding, C-terminal DOE60_RS21480 IPR040582 MalK, OB fold domain DOE60_RS21480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21480 IPR005116 Transport-associated OB, type 1 DOE60_RS21485 IPR018981 Outer membrane protein G DOE60_RS21490 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE60_RS21490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS21490 IPR000843 LacI-type HTH domain DOE60_RS21490 IPR028082 Periplasmic binding protein-like I DOE60_RS21495 IPR007413 Protein of unknown function DUF463, YcjX-like protein DOE60_RS21500 IPR021147 Protein of unknown function DUF697 DOE60_RS21500 IPR006507 Uncharacterised protein family UPF0283 DOE60_RS21505 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE60_RS21505 IPR035965 PAS domain superfamily DOE60_RS21505 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE60_RS21505 IPR000014 PAS domain DOE60_RS21505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21505 IPR030828 TyrR family, helix-turn-helix domain DOE60_RS21505 IPR009057 Homeobox-like domain superfamily DOE60_RS21505 IPR002912 ACT domain DOE60_RS21505 IPR003593 AAA+ ATPase domain DOE60_RS21505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE60_RS21505 IPR025944 Sigma-54 interaction domain, conserved site DOE60_RS21510 IPR013766 Thioredoxin domain DOE60_RS21510 IPR002065 Thiol peroxidase Tpx DOE60_RS21510 IPR036249 Thioredoxin-like superfamily DOE60_RS21510 IPR018219 Thiol peroxidase conserved site DOE60_RS21510 IPR013740 Redoxin DOE60_RS21515 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE60_RS21515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS21515 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE60_RS21515 IPR029017 Enolase-like, N-terminal DOE60_RS21515 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS21515 IPR029065 Enolase C-terminal domain-like DOE60_RS21515 IPR034603 Dipeptide epimerase DOE60_RS21520 IPR000834 Peptidase M14, carboxypeptidase A DOE60_RS21525 IPR023765 Solute-binding protein family 5, conserved site DOE60_RS21525 IPR039424 Solute-binding protein family 5 DOE60_RS21525 IPR000914 Solute-binding protein family 5 domain DOE60_RS21525 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS21535 IPR005119 LysR, substrate-binding DOE60_RS21535 IPR000847 Transcription regulator HTH, LysR DOE60_RS21535 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21535 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21540 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS21540 IPR020471 Aldo/keto reductase DOE60_RS21540 IPR018170 Aldo/keto reductase, conserved site DOE60_RS21540 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS21545 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS21545 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21545 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS21550 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS21550 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS21550 IPR009057 Homeobox-like domain superfamily DOE60_RS21550 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE60_RS21565 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS21565 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS21565 IPR018062 HTH domain AraC-type, conserved site DOE60_RS21565 IPR011256 Regulatory factor, effector binding domain superfamily DOE60_RS21565 IPR029442 GyrI-like small molecule binding domain DOE60_RS21565 IPR009057 Homeobox-like domain superfamily DOE60_RS21590 IPR013766 Thioredoxin domain DOE60_RS21590 IPR013740 Redoxin DOE60_RS21590 IPR018219 Thiol peroxidase conserved site DOE60_RS21590 IPR002065 Thiol peroxidase Tpx DOE60_RS21590 IPR036249 Thioredoxin-like superfamily DOE60_RS21610 IPR006685 Mechanosensitive ion channel MscS DOE60_RS21610 IPR010920 LSM domain superfamily DOE60_RS21610 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS21610 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE60_RS21610 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS21610 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS21615 IPR019685 Protein of unknown function DUF2534 DOE60_RS21620 IPR006016 UspA DOE60_RS21625 IPR014710 RmlC-like jelly roll fold DOE60_RS21625 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21625 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOE60_RS21625 IPR018490 Cyclic nucleotide-binding-like DOE60_RS21625 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21625 IPR000595 Cyclic nucleotide-binding domain DOE60_RS21625 IPR012318 Crp-type HTH domain DOE60_RS21630 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DOE60_RS21630 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DOE60_RS21630 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21630 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOE60_RS21630 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DOE60_RS21630 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOE60_RS21630 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DOE60_RS21635 IPR002625 Smr domain DOE60_RS21635 IPR036063 Smr domain superfamily DOE60_RS21645 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS21645 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS21645 IPR003660 HAMP domain DOE60_RS21645 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS21645 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS21645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS21650 IPR023714 Zinc transport protein ZntB DOE60_RS21650 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DOE60_RS21660 IPR011545 DEAD/DEAH box helicase domain DOE60_RS21660 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOE60_RS21660 IPR028619 ATP-dependent RNA helicase DbpA DOE60_RS21660 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS21660 IPR001650 Helicase, C-terminal DOE60_RS21660 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE60_RS21660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21660 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE60_RS21660 IPR014014 RNA helicase, DEAD-box type, Q motif DOE60_RS21665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS21665 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase DOE60_RS21665 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type DOE60_RS21665 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOE60_RS21685 IPR000390 Small multidrug resistance protein family DOE60_RS21690 IPR006016 UspA DOE60_RS21690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS21690 IPR006015 Universal stress protein A family DOE60_RS21700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS21700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS21700 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DOE60_RS21700 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain DOE60_RS21700 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain DOE60_RS21700 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal DOE60_RS21700 IPR011895 Pyruvate-flavodoxin oxidoreductase DOE60_RS21700 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain DOE60_RS21700 IPR029061 Thiamin diphosphate-binding fold DOE60_RS21700 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE60_RS21700 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE60_RS21700 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily DOE60_RS21710 IPR005590 Protein of unknown function DUF333 DOE60_RS21715 IPR038670 HslJ-like superfamily DOE60_RS21715 IPR005184 Domain of unknown function DUF306, Meta/HslJ DOE60_RS21720 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21720 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE60_RS21720 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE60_RS21720 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE60_RS21720 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE60_RS21725 IPR021730 Dicarboxylate transport DOE60_RS21730 IPR025985 YnbE-like lipoprotein DOE60_RS21735 IPR008309 Uncharacterised conserved protein UCP025560 DOE60_RS21740 IPR000462 CDP-alcohol phosphatidyltransferase DOE60_RS21745 IPR000374 Phosphatidate cytidylyltransferase DOE60_RS21760 IPR003680 Flavodoxin-like fold DOE60_RS21760 IPR029039 Flavoprotein-like superfamily DOE60_RS21760 IPR023048 NADH-azoreductase, FMN-dependent DOE60_RS21765 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE60_RS21765 IPR024590 RNA helicase HrpA, C-terminal DOE60_RS21765 IPR007502 Helicase-associated domain DOE60_RS21765 IPR011709 Domain of unknown function DUF1605 DOE60_RS21765 IPR011545 DEAD/DEAH box helicase domain DOE60_RS21765 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21765 IPR010222 RNA helicase HrpA DOE60_RS21765 IPR001650 Helicase, C-terminal DOE60_RS21765 IPR003593 AAA+ ATPase domain DOE60_RS21770 IPR003848 Domain of unknown function DUF218 DOE60_RS21770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS21775 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS21775 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS21780 IPR013217 Methyltransferase type 12 DOE60_RS21780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS21780 IPR016584 Methyltransferase VrtF-like DOE60_RS21790 IPR035906 MetI-like superfamily DOE60_RS21790 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS21790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21795 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE60_RS21795 IPR003439 ABC transporter-like DOE60_RS21795 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS21795 IPR017871 ABC transporter, conserved site DOE60_RS21795 IPR003593 AAA+ ATPase domain DOE60_RS21800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS21800 IPR035906 MetI-like superfamily DOE60_RS21800 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE60_RS21805 IPR018313 Solute-binding protein family 3, conserved site DOE60_RS21805 IPR001320 Ionotropic glutamate receptor DOE60_RS21805 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE60_RS21815 IPR010637 Sif DOE60_RS21815 IPR036514 SGNH hydrolase superfamily DOE60_RS21815 IPR001087 GDSL lipase/esterase DOE60_RS21830 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE60_RS21830 IPR003735 Metal-sensitive transcriptional repressor DOE60_RS21835 IPR036291 NAD(P)-binding domain superfamily DOE60_RS21835 IPR011032 GroES-like superfamily DOE60_RS21835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS21835 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS21835 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS21835 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS21835 IPR014183 Alcohol dehydrogenase class III DOE60_RS21840 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE60_RS21840 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE60_RS21840 IPR004090 Chemotaxis methyl-accepting receptor DOE60_RS21840 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE60_RS21840 IPR003660 HAMP domain DOE60_RS21840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE60_RS21845 IPR005119 LysR, substrate-binding DOE60_RS21845 IPR000847 Transcription regulator HTH, LysR DOE60_RS21845 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21845 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21850 IPR009770 Domain of unknown function DUF1338 DOE60_RS21855 IPR002018 Carboxylesterase, type B DOE60_RS21855 IPR000997 Cholinesterase DOE60_RS21855 IPR029058 Alpha/Beta hydrolase fold DOE60_RS21855 IPR019819 Carboxylesterase type B, conserved site DOE60_RS21855 IPR019826 Carboxylesterase type B, active site DOE60_RS21860 IPR013783 Immunoglobulin-like fold DOE60_RS21860 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS21860 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS21860 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS21860 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS21860 IPR014756 Immunoglobulin E-set DOE60_RS21860 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal DOE60_RS21860 IPR014438 Glucan biosynthesis protein MdoG/MdoD DOE60_RS21860 IPR023724 Glucan biosynthesis, MdoD DOE60_RS21865 IPR023480 Uncharacterised protein family UPF0312/YceI DOE60_RS21865 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE60_RS21865 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE60_RS21870 IPR000262 FMN-dependent dehydrogenase DOE60_RS21870 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DOE60_RS21870 IPR013785 Aldolase-type TIM barrel DOE60_RS21870 IPR037396 FMN hydroxy acid dehydrogenase domain DOE60_RS21870 IPR014080 L-lactate oxidase DOE60_RS21875 IPR024170 Aminoglycoside N6-acetyltransferase DOE60_RS21875 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS21875 IPR000182 GNAT domain DOE60_RS21880 IPR037171 NagB/RpiA transferase-like DOE60_RS21880 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS21880 IPR001034 DeoR-type HTH domain DOE60_RS21880 IPR014036 DeoR C-terminal sensor domain DOE60_RS21885 IPR000056 Ribulose-phosphate 3-epimerase-like DOE60_RS21885 IPR013785 Aldolase-type TIM barrel DOE60_RS21885 IPR011060 Ribulose-phosphate binding barrel DOE60_RS21890 IPR016152 Phosphotransferase/anion transporter DOE60_RS21890 IPR002178 PTS EIIA type-2 domain DOE60_RS21895 IPR011060 Ribulose-phosphate binding barrel DOE60_RS21895 IPR005137 Membrane complex biogenesis protein, BtpA family DOE60_RS21900 IPR013853 Galactitol permease IIC component DOE60_RS21900 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE60_RS21900 IPR004703 Phosphotransferase system, sugar-specific permease component DOE60_RS21905 IPR036095 PTS system IIB component-like superfamily DOE60_RS21905 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE60_RS21905 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS21910 IPR023367 Peptidase M42, domain 2 DOE60_RS21910 IPR008007 Peptidase M42 DOE60_RS21915 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS21915 IPR000182 GNAT domain DOE60_RS21920 IPR011004 Trimeric LpxA-like superfamily DOE60_RS21920 IPR040831 Beta solenoid repeat from YDCK DOE60_RS21925 IPR004695 Voltage-dependent anion channel DOE60_RS21925 IPR011552 Tellurite resistance protein TehA/malic acid transport protein DOE60_RS21925 IPR038665 Voltage-dependent anion channel superfamily DOE60_RS21925 IPR039264 Tellurite resistance protein TehA DOE60_RS21930 IPR015985 Tellurite resistance methyltransferase TehB-like domain DOE60_RS21930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS21930 IPR004537 Tellurite resistance methyltransferase, TehB DOE60_RS21935 IPR021747 Protein of unknown function DUF3313 DOE60_RS21945 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS21945 IPR014710 RmlC-like jelly roll fold DOE60_RS21945 IPR011051 RmlC-like cupin domain superfamily DOE60_RS21945 IPR001387 Cro/C1-type helix-turn-helix domain DOE60_RS21945 IPR013096 Cupin 2, conserved barrel DOE60_RS21950 IPR001539 Peptidase U32 DOE60_RS21950 IPR020988 Peptidase U32, collagenase DOE60_RS21955 IPR020117 Uncharacterised protein family YncJ DOE60_RS21960 IPR010637 Sif DOE60_RS21970 IPR000755 D-alanyl-D-alanine dipeptidase DOE60_RS21970 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE60_RS21975 IPR004839 Aminotransferase, class I/classII DOE60_RS21975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS21975 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS21975 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS21975 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS21975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS21975 IPR000524 Transcription regulator HTH, GntR DOE60_RS21980 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS21980 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS21980 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS21980 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS21980 IPR017749 1-pyrroline dehydrogenase DOE60_RS21980 IPR015657 Aminobutyraldehyde dehydrogenase DOE60_RS21980 IPR015590 Aldehyde dehydrogenase domain DOE60_RS21990 IPR019689 Toxin GhoT/OrtT DOE60_RS22010 IPR019671 Protein of unknown function DUF2526 DOE60_RS22015 IPR006750 Putative inner membrane exporter, YdcZ DOE60_RS22020 IPR000182 GNAT domain DOE60_RS22020 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS22025 IPR041694 Oxidoreductase, N-terminal domain DOE60_RS22025 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS22025 IPR011032 GroES-like superfamily DOE60_RS22025 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS22025 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22030 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22030 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS22030 IPR000524 Transcription regulator HTH, GntR DOE60_RS22030 IPR011711 GntR, C-terminal DOE60_RS22030 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22035 IPR010105 TonB-dependent siderophore receptor DOE60_RS22035 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE60_RS22035 IPR039426 Vitamin B12 transporter BtuB-like DOE60_RS22035 IPR012910 TonB-dependent receptor, plug domain DOE60_RS22035 IPR037066 TonB-dependent receptor, plug domain superfamily DOE60_RS22035 IPR000531 TonB-dependent receptor-like, beta-barrel DOE60_RS22040 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DOE60_RS22040 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE60_RS22045 IPR010305 Protein of unknown function DUF903 DOE60_RS22045 IPR010920 LSM domain superfamily DOE60_RS22050 IPR004840 Amino acid permease, conserved site DOE60_RS22050 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS22060 IPR003192 Porin, LamB-type DOE60_RS22060 IPR021570 LamB-type porin N-terminal domain DOE60_RS22060 IPR036998 Porin, LamB-type superfamily DOE60_RS22065 IPR039672 Lactose permease-like DOE60_RS22065 IPR001927 Sodium:galactoside symporter DOE60_RS22065 IPR018043 Sodium:galactoside symporter, conserved site DOE60_RS22065 IPR036259 MFS transporter superfamily DOE60_RS22075 IPR018062 HTH domain AraC-type, conserved site DOE60_RS22075 IPR014710 RmlC-like jelly roll fold DOE60_RS22075 IPR037923 Transcription regulator HTH-like DOE60_RS22075 IPR009057 Homeobox-like domain superfamily DOE60_RS22075 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE60_RS22075 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS22075 IPR023609 Transcription regulator HTH, RhaS DOE60_RS22075 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS22080 IPR001447 Arylamine N-acetyltransferase DOE60_RS22080 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS22090 IPR023234 NarG-like domain DOE60_RS22090 IPR003816 Nitrate reductase, gamma subunit DOE60_RS22090 IPR036197 NarG-like superfamily DOE60_RS22095 IPR036411 TorD-like superfamily DOE60_RS22095 IPR003765 Nitrate reductase chaperone, NarJ DOE60_RS22095 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS22100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS22100 IPR038262 Nitrate reductase beta, C-terminal domain superfamily DOE60_RS22100 IPR029263 Respiratory nitrate reductase beta, C-terminal DOE60_RS22100 IPR006547 Nitrate reductase, beta subunit DOE60_RS22105 IPR006656 Molybdopterin oxidoreductase DOE60_RS22105 IPR028189 Nitrate reductase, alpha subunit, N-terminal DOE60_RS22105 IPR006468 Nitrate reductase, alpha subunit DOE60_RS22105 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS22105 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS22105 IPR037943 Nitrate reductase alpha subunit-like, MopB domain DOE60_RS22105 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS22105 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS22105 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS22110 IPR004737 Nitrate transporter DOE60_RS22110 IPR036259 MFS transporter superfamily DOE60_RS22110 IPR011701 Major facilitator superfamily DOE60_RS22115 IPR009057 Homeobox-like domain superfamily DOE60_RS22115 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS22115 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS22120 IPR020846 Major facilitator superfamily domain DOE60_RS22120 IPR011701 Major facilitator superfamily DOE60_RS22120 IPR036259 MFS transporter superfamily DOE60_RS22130 IPR033900 Porin domain, Gram-negative type DOE60_RS22130 IPR001897 Porin, gammaproteobacterial DOE60_RS22130 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS22130 IPR001702 Porin, Gram-negative type DOE60_RS22130 IPR023614 Porin domain superfamily DOE60_RS22140 IPR000620 EamA domain DOE60_RS22150 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS22150 IPR006656 Molybdopterin oxidoreductase DOE60_RS22150 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS22150 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS22150 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS22150 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS22150 IPR006443 Formate dehydrogenase-N, alpha subunit DOE60_RS22150 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS22155 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS22155 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS22155 IPR006443 Formate dehydrogenase-N, alpha subunit DOE60_RS22155 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS22155 IPR006656 Molybdopterin oxidoreductase DOE60_RS22155 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS22155 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS22155 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS22160 IPR015246 Formate dehydrogenase, transmembrane DOE60_RS22160 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DOE60_RS22160 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria DOE60_RS22160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS22160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS22160 IPR014603 Formate dehydrogenase iron-sulphur subunit DOE60_RS22165 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS22165 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS22165 IPR006471 Formate dehydrogenase, gamma subunit DOE60_RS22170 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS22170 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS22170 IPR011032 GroES-like superfamily DOE60_RS22170 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS22170 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS22170 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22175 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22175 IPR001891 Malic oxidoreductase DOE60_RS22175 IPR023667 NAD-dependent malic enzyme, proteobacteria DOE60_RS22175 IPR012302 Malic enzyme, NAD-binding DOE60_RS22175 IPR037062 Malic enzyme, N-terminal domain superfamily DOE60_RS22175 IPR012301 Malic enzyme, N-terminal domain DOE60_RS22175 IPR015884 Malic enzyme, conserved site DOE60_RS22180 IPR012607 Ribosomal protein S22 DOE60_RS22185 IPR019625 Biofilm-dependent modulation protein Bdm, putative DOE60_RS22190 IPR003718 OsmC/Ohr family DOE60_RS22190 IPR036102 OsmC/Ohr superfamily DOE60_RS22190 IPR015946 K homology domain-like, alpha/beta DOE60_RS22190 IPR019904 Peroxiredoxin OsmC DOE60_RS22195 IPR028623 HNS-dependent expression B DOE60_RS22195 IPR010486 HNS-dependent expression A/B DOE60_RS22195 IPR038303 HNS-dependent expression A/B superfamily DOE60_RS22205 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DOE60_RS22205 IPR012768 Malto-oligosyltrehalose trehalohydrolase DOE60_RS22205 IPR017853 Glycoside hydrolase superfamily DOE60_RS22205 IPR013780 Glycosyl hydrolase, all-beta DOE60_RS22205 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE60_RS22205 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS22205 IPR014756 Immunoglobulin E-set DOE60_RS22205 IPR013783 Immunoglobulin-like fold DOE60_RS22210 IPR012767 Maltooligosyl trehalose synthase DOE60_RS22210 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE60_RS22210 IPR017853 Glycoside hydrolase superfamily DOE60_RS22220 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS22220 IPR028082 Periplasmic binding protein-like I DOE60_RS22220 IPR000843 LacI-type HTH domain DOE60_RS22250 IPR035959 RutC-like superfamily DOE60_RS22250 IPR038743 YjgH-like DOE60_RS22250 IPR006175 YjgF/YER057c/UK114 family DOE60_RS22255 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DOE60_RS22255 IPR042118 QueA, domain 1 DOE60_RS22255 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DOE60_RS22255 IPR042119 QueA, domain 2 DOE60_RS22265 IPR002938 FAD-binding domain DOE60_RS22265 IPR036188 FAD/NAD(P)-binding domain superfamily DOE60_RS22270 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE60_RS22270 IPR005829 Sugar transporter, conserved site DOE60_RS22270 IPR020846 Major facilitator superfamily domain DOE60_RS22270 IPR011701 Major facilitator superfamily DOE60_RS22270 IPR036259 MFS transporter superfamily DOE60_RS22270 IPR004734 Multidrug resistance protein DOE60_RS22280 IPR020846 Major facilitator superfamily domain DOE60_RS22280 IPR011701 Major facilitator superfamily DOE60_RS22280 IPR000849 Sugar phosphate transporter DOE60_RS22280 IPR036259 MFS transporter superfamily DOE60_RS22285 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS22285 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS22285 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22285 IPR011032 GroES-like superfamily DOE60_RS22290 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22290 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22290 IPR011711 GntR, C-terminal DOE60_RS22290 IPR000524 Transcription regulator HTH, GntR DOE60_RS22290 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS22300 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE60_RS22300 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS22300 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE60_RS22300 IPR001821 [NiFe]-hydrogenase, small subunit DOE60_RS22300 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE60_RS22300 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE60_RS22300 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE60_RS22305 IPR001501 Nickel-dependent hydrogenase, large subunit DOE60_RS22305 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE60_RS22305 IPR029014 [NiFe]-hydrogenase, large subunit DOE60_RS22310 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit DOE60_RS22310 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS22310 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS22315 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE60_RS22315 IPR023430 Peptidase HybD-like domain superfamily DOE60_RS22315 IPR000671 Peptidase A31 family DOE60_RS22320 IPR019812 Hydrogenase assembly chaperone, conserved site DOE60_RS22320 IPR037254 HupF/HypC superfamily DOE60_RS22320 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE60_RS22330 IPR006894 HupH hydrogenase expression protein, C-terminal DOE60_RS22330 IPR038527 HupH, C-terminal domain superfamily DOE60_RS22340 IPR000688 Hydrogenase maturation factor HypA/HybF DOE60_RS22340 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE60_RS22345 IPR023614 Porin domain superfamily DOE60_RS22345 IPR001702 Porin, Gram-negative type DOE60_RS22345 IPR001897 Porin, gammaproteobacterial DOE60_RS22345 IPR013793 Porin, Gram-negative type, conserved site DOE60_RS22365 IPR023668 Altronate oxidoreductase DOE60_RS22365 IPR013131 Mannitol dehydrogenase, N-terminal DOE60_RS22365 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22365 IPR013118 Mannitol dehydrogenase, C-terminal DOE60_RS22365 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS22365 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS22370 IPR020378 Protein of unknown function DUF4186 DOE60_RS22375 IPR012338 Beta-lactamase/transpeptidase-like DOE60_RS22375 IPR015868 Glutaminase DOE60_RS22380 IPR015590 Aldehyde dehydrogenase domain DOE60_RS22380 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS22380 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS22380 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS22380 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS22385 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22385 IPR005119 LysR, substrate-binding DOE60_RS22385 IPR000847 Transcription regulator HTH, LysR DOE60_RS22385 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22390 IPR023495 Sugar efflux transporter, putative DOE60_RS22390 IPR036259 MFS transporter superfamily DOE60_RS22390 IPR011701 Major facilitator superfamily DOE60_RS22390 IPR020846 Major facilitator superfamily domain DOE60_RS22395 IPR002771 Multiple antibiotic resistance (MarC)-related DOE60_RS22400 IPR000835 MarR-type HTH domain DOE60_RS22400 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22400 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22400 IPR023187 Transcriptional regulator MarR-type, conserved site DOE60_RS22405 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS22405 IPR018062 HTH domain AraC-type, conserved site DOE60_RS22405 IPR009057 Homeobox-like domain superfamily DOE60_RS22410 IPR025732 MarB protein DOE60_RS22415 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS22415 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS22415 IPR011006 CheY-like superfamily DOE60_RS22415 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22415 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS22425 IPR000620 EamA domain DOE60_RS22430 IPR011701 Major facilitator superfamily DOE60_RS22430 IPR020846 Major facilitator superfamily domain DOE60_RS22430 IPR036259 MFS transporter superfamily DOE60_RS22445 IPR016052 Bacteriophage 933W, L0136 DOE60_RS22445 IPR005220 Bacterial OB-fold DOE60_RS22445 IPR036700 Bacterial OB-fold superfamily DOE60_RS22450 IPR008136 CinA, C-terminal DOE60_RS22450 IPR036653 CinA-like, C-terminal DOE60_RS22455 IPR019626 Stress-induced protein, KGG, repeat DOE60_RS22465 IPR001567 Peptidase M3A/M3B catalytic domain DOE60_RS22465 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOE60_RS22470 IPR002347 Short-chain dehydrogenase/reductase SDR DOE60_RS22470 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE60_RS22470 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22475 IPR011711 GntR, C-terminal DOE60_RS22475 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE60_RS22475 IPR000524 Transcription regulator HTH, GntR DOE60_RS22475 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22475 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22480 IPR017704 Putative selenium-binding protein YdfZ DOE60_RS22485 IPR000669 Mannitol dehydrogenase DOE60_RS22485 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE60_RS22485 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE60_RS22485 IPR023027 Mannitol dehydrogenase, conserved site DOE60_RS22485 IPR013118 Mannitol dehydrogenase, C-terminal DOE60_RS22485 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22485 IPR013131 Mannitol dehydrogenase, N-terminal DOE60_RS22490 IPR011701 Major facilitator superfamily DOE60_RS22490 IPR020846 Major facilitator superfamily domain DOE60_RS22490 IPR005828 Major facilitator, sugar transporter-like DOE60_RS22490 IPR004736 MFS transporter, metabolite:H symporter DOE60_RS22490 IPR036259 MFS transporter superfamily DOE60_RS22495 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22495 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS22495 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS22495 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS22495 IPR011032 GroES-like superfamily DOE60_RS22500 IPR029017 Enolase-like, N-terminal DOE60_RS22500 IPR034589 D-mannonate dehydratase-like DOE60_RS22500 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE60_RS22500 IPR036849 Enolase-like, C-terminal domain superfamily DOE60_RS22500 IPR029065 Enolase C-terminal domain-like DOE60_RS22500 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE60_RS22500 IPR034593 Mandelate racemase-like DOE60_RS22500 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE60_RS22505 IPR003844 Uncharacterised protein family UPF0060 DOE60_RS22510 IPR009700 Protein of unknown function DUF1283 DOE60_RS22515 IPR000182 GNAT domain DOE60_RS22515 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS22520 IPR010646 Uncharacterised protein family UPF0257 DOE60_RS22525 IPR010595 Protein of unknown function DUF1161 DOE60_RS22530 IPR006656 Molybdopterin oxidoreductase DOE60_RS22530 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS22530 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS22530 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS22530 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE60_RS22530 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS22530 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS22535 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE60_RS22535 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE60_RS22535 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE60_RS22535 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS22535 IPR006656 Molybdopterin oxidoreductase DOE60_RS22535 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS22535 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS22535 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS22540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS22540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS22540 IPR014297 Dimethylsulphoxide reductase, chain B DOE60_RS22545 IPR007059 DMSO reductase anchor subunit (DmsC) DOE60_RS22550 IPR036411 TorD-like superfamily DOE60_RS22550 IPR026269 Tat proofreading chaperone DmsD-type DOE60_RS22550 IPR028611 Tat proofreading chaperone DmsD DOE60_RS22550 IPR020945 DMSO/Nitrate reductase chaperone DOE60_RS22555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS22555 IPR035906 MetI-like superfamily DOE60_RS22560 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE60_RS22565 IPR035906 MetI-like superfamily DOE60_RS22565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS22570 IPR003593 AAA+ ATPase domain DOE60_RS22570 IPR003439 ABC transporter-like DOE60_RS22570 IPR017871 ABC transporter, conserved site DOE60_RS22570 IPR000644 CBS domain DOE60_RS22570 IPR005892 Glycine betaine transport ATP-binding subunit DOE60_RS22570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS22575 IPR014743 Chloride channel, core DOE60_RS22575 IPR023790 Chloride channel, voltage-gated, ClcB DOE60_RS22575 IPR001807 Chloride channel, voltage gated DOE60_RS22585 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22585 IPR000600 ROK family DOE60_RS22585 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22595 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22595 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22595 IPR000847 Transcription regulator HTH, LysR DOE60_RS22595 IPR005119 LysR, substrate-binding DOE60_RS22600 IPR036259 MFS transporter superfamily DOE60_RS22600 IPR005829 Sugar transporter, conserved site DOE60_RS22600 IPR020846 Major facilitator superfamily domain DOE60_RS22600 IPR011701 Major facilitator superfamily DOE60_RS22610 IPR033116 Serine proteases, trypsin family, serine active site DOE60_RS22610 IPR018114 Serine proteases, trypsin family, histidine active site DOE60_RS22610 IPR001254 Serine proteases, trypsin domain DOE60_RS22610 IPR009003 Peptidase S1, PA clan DOE60_RS22610 IPR008256 Peptidase S1B DOE60_RS22615 IPR023737 Spermidine export protein MdtI DOE60_RS22615 IPR000390 Small multidrug resistance protein family DOE60_RS22620 IPR023740 Spermidine export protein MdtJ DOE60_RS22620 IPR000390 Small multidrug resistance protein family DOE60_RS22630 IPR002549 Transmembrane protein TqsA-like DOE60_RS22635 IPR034300 NADP transhydrogenase beta-like domain DOE60_RS22635 IPR012136 NADP transhydrogenase, beta subunit DOE60_RS22635 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE60_RS22640 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DOE60_RS22640 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE60_RS22640 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE60_RS22640 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22640 IPR026255 NAD(P) transhydrogenase, alpha subunit DOE60_RS22640 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DOE60_RS22640 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DOE60_RS22645 IPR025543 Dodecin-like DOE60_RS22645 IPR010854 Domain of unknown function DUF1471 DOE60_RS22645 IPR025539 YdgH protein DOE60_RS22645 IPR036275 YdgH-like superfamily DOE60_RS22650 IPR004754 Amino acid antiporter DOE60_RS22650 IPR002293 Amino acid/polyamine transporter I DOE60_RS22655 IPR009707 Membrane protein GlpM/YdgC DOE60_RS22660 IPR001867 OmpR/PhoB-type DNA-binding domain DOE60_RS22660 IPR039420 Transcriptional regulatory protein WalR-like DOE60_RS22660 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS22660 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS22660 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22660 IPR011006 CheY-like superfamily DOE60_RS22670 IPR001897 Porin, gammaproteobacterial DOE60_RS22670 IPR023614 Porin domain superfamily DOE60_RS22670 IPR033900 Porin domain, Gram-negative type DOE60_RS22670 IPR001702 Porin, Gram-negative type DOE60_RS22675 IPR006679 Adenine deaminase DOE60_RS22675 IPR026912 Adenine deaminase C-terminal domain DOE60_RS22675 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE60_RS22675 IPR032466 Metal-dependent hydrolase DOE60_RS22675 IPR006680 Amidohydrolase-related DOE60_RS22680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS22680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS22680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS22680 IPR005467 Histidine kinase domain DOE60_RS22680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS22680 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS22680 IPR003660 HAMP domain DOE60_RS22685 IPR036381 Replication terminator Tus, domain 1 DOE60_RS22685 IPR036384 Replication terminator Tus superfamily DOE60_RS22685 IPR008865 DNA replication terminus site-binding protein DOE60_RS22690 IPR000362 Fumarate lyase family DOE60_RS22690 IPR018951 Fumarase C, C-terminal DOE60_RS22690 IPR024083 Fumarase/histidase, N-terminal DOE60_RS22690 IPR022761 Fumarate lyase, N-terminal DOE60_RS22690 IPR005677 Fumarate hydratase, class II DOE60_RS22690 IPR020557 Fumarate lyase, conserved site DOE60_RS22690 IPR008948 L-Aspartase-like DOE60_RS22695 IPR011167 Iron-dependent fumarate hydratase DOE60_RS22695 IPR020557 Fumarate lyase, conserved site DOE60_RS22695 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE60_RS22695 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE60_RS22695 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE60_RS22700 IPR001250 Mannose-6-phosphate isomerase, type I DOE60_RS22700 IPR018050 Phosphomannose isomerase, type I, conserved site DOE60_RS22700 IPR014710 RmlC-like jelly roll fold DOE60_RS22700 IPR011051 RmlC-like cupin domain superfamily DOE60_RS22700 IPR016305 Mannose-6-phosphate isomerase DOE60_RS22705 IPR010352 Protein of unknown function DUF945 DOE60_RS22710 IPR000843 LacI-type HTH domain DOE60_RS22710 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE60_RS22710 IPR028082 Periplasmic binding protein-like I DOE60_RS22710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS22715 IPR036878 Glucose permease domain IIB DOE60_RS22715 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE60_RS22715 IPR003352 Phosphotransferase system, EIIC DOE60_RS22715 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE60_RS22715 IPR011301 PTS system, maltose/glucose-specific IIBC component DOE60_RS22715 IPR001996 Phosphotransferase system, IIB component, type 1 DOE60_RS22715 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE60_RS22720 IPR004839 Aminotransferase, class I/classII DOE60_RS22720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS22720 IPR027619 Putative C-S lyase DOE60_RS22720 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS22720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS22725 IPR001365 Adenosine/AMP deaminase domain DOE60_RS22725 IPR028893 Adenosine deaminase DOE60_RS22725 IPR006650 Adenosine/AMP deaminase active site DOE60_RS22725 IPR032466 Metal-dependent hydrolase DOE60_RS22725 IPR006330 Adenosine/adenine deaminase DOE60_RS22730 IPR004104 Oxidoreductase, C-terminal DOE60_RS22730 IPR000683 Oxidoreductase, N-terminal DOE60_RS22730 IPR036291 NAD(P)-binding domain superfamily DOE60_RS22740 IPR036666 HHA superfamily DOE60_RS22740 IPR007985 Haemolysin expression modulating, HHA DOE60_RS22745 IPR019690 Protein of unknown function DUF2569 DOE60_RS22750 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA DOE60_RS22750 IPR003667 NqrDE/RnfAE DOE60_RS22755 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS22755 IPR011005 Dihydropteroate synthase-like DOE60_RS22755 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS22755 IPR007202 4Fe-4S domain DOE60_RS22755 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria DOE60_RS22755 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB DOE60_RS22760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS22760 IPR009051 Alpha-helical ferredoxin DOE60_RS22760 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DOE60_RS22760 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE60_RS22760 IPR019554 Soluble ligand binding domain DOE60_RS22760 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE60_RS22760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS22760 IPR026902 RnfC Barrel sandwich hybrid domain DOE60_RS22765 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD DOE60_RS22765 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D DOE60_RS22770 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG DOE60_RS22770 IPR007329 FMN-binding DOE60_RS22775 IPR010968 Ion-translocating oxidoreductase complex subunit E DOE60_RS22775 IPR003667 NqrDE/RnfAE DOE60_RS22780 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOE60_RS22780 IPR004035 Endonuclease III, iron-sulphur binding site DOE60_RS22780 IPR003265 HhH-GPD domain DOE60_RS22780 IPR011257 DNA glycosylase DOE60_RS22780 IPR004036 Endonuclease III-like, conserved site-2 DOE60_RS22780 IPR000445 Helix-hairpin-helix motif DOE60_RS22780 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE60_RS22780 IPR005759 Endonuclease III DOE60_RS22785 IPR036259 MFS transporter superfamily DOE60_RS22785 IPR005279 Dipeptide/tripeptide permease DOE60_RS22785 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE60_RS22785 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A DOE60_RS22785 IPR020846 Major facilitator superfamily domain DOE60_RS22785 IPR000109 Proton-dependent oligopeptide transporter family DOE60_RS22790 IPR036249 Thioredoxin-like superfamily DOE60_RS22790 IPR004046 Glutathione S-transferase, C-terminal DOE60_RS22790 IPR004045 Glutathione S-transferase, N-terminal DOE60_RS22790 IPR040079 Glutathione Transferase family DOE60_RS22790 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE60_RS22790 IPR010987 Glutathione S-transferase, C-terminal-like DOE60_RS22795 IPR004625 Pyridoxine kinase DOE60_RS22795 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE60_RS22795 IPR023685 Pyridoxal kinase PdxY DOE60_RS22795 IPR029056 Ribokinase-like DOE60_RS22800 IPR002307 Tyrosine-tRNA ligase DOE60_RS22800 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 DOE60_RS22800 IPR036986 RNA-binding S4 domain superfamily DOE60_RS22800 IPR002942 RNA-binding S4 domain DOE60_RS22800 IPR024088 Tyrosine-tRNA ligase, bacterial-type DOE60_RS22800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS22800 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE60_RS22800 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE60_RS22805 IPR000659 Pyridoxamine 5'-phosphate oxidase DOE60_RS22805 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DOE60_RS22805 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative DOE60_RS22805 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DOE60_RS22805 IPR012349 FMN-binding split barrel DOE60_RS22810 IPR036328 C-type lysozyme inhibitor superfamily DOE60_RS22810 IPR018660 C-type lysozyme inhibitor DOE60_RS22815 IPR005338 Anhydro-N-acetylmuramic acid kinase DOE60_RS22820 IPR008816 Glycine zipper 2TM domain DOE60_RS22825 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22825 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22825 IPR023071 Transcriptional regulator, SlyA DOE60_RS22825 IPR023187 Transcriptional regulator MarR-type, conserved site DOE60_RS22825 IPR000835 MarR-type HTH domain DOE60_RS22830 IPR012451 Protein of unknown function DUF1656 DOE60_RS22835 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE60_RS22835 IPR006143 RND efflux pump, membrane fusion protein DOE60_RS22840 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE60_RS22845 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DOE60_RS22845 IPR001424 Superoxide dismutase, copper/zinc binding domain DOE60_RS22845 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DOE60_RS22845 IPR018152 Superoxide dismutase, copper/zinc, binding site DOE60_RS22850 IPR020471 Aldo/keto reductase DOE60_RS22850 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS22850 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS22855 IPR010710 Protein of unknown function DUF1289 DOE60_RS22860 IPR011075 Tetracyclin repressor-like, C-terminal domain DOE60_RS22860 IPR009057 Homeobox-like domain superfamily DOE60_RS22860 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE60_RS22860 IPR001647 DNA-binding HTH domain, TetR-type DOE60_RS22865 IPR013785 Aldolase-type TIM barrel DOE60_RS22865 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOE60_RS22870 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE60_RS22870 IPR037523 Vicinal oxygen chelate (VOC) domain DOE60_RS22870 IPR004361 Glyoxalase I DOE60_RS22870 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE60_RS22870 IPR018146 Glyoxalase I, conserved site DOE60_RS22875 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE60_RS22875 IPR036397 Ribonuclease H superfamily DOE60_RS22875 IPR012337 Ribonuclease H-like superfamily DOE60_RS22875 IPR005987 Ribonuclease T DOE60_RS22880 IPR002109 Glutaredoxin DOE60_RS22880 IPR014434 Monothiol glutaredoxin DOE60_RS22880 IPR004480 Monothiol glutaredoxin-related DOE60_RS22880 IPR036249 Thioredoxin-like superfamily DOE60_RS22880 IPR033658 Glutaredoxin, PICOT-like DOE60_RS22885 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS22885 IPR000064 Endopeptidase, NLPC/P60 domain DOE60_RS22890 IPR001189 Manganese/iron superoxide dismutase DOE60_RS22890 IPR019833 Manganese/iron superoxide dismutase, binding site DOE60_RS22890 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOE60_RS22890 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOE60_RS22890 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOE60_RS22890 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOE60_RS22905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE60_RS22905 IPR000843 LacI-type HTH domain DOE60_RS22905 IPR023588 Transcription regulator HTH, PurR DOE60_RS22905 IPR028082 Periplasmic binding protein-like I DOE60_RS22910 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS22910 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS22910 IPR000847 Transcription regulator HTH, LysR DOE60_RS22910 IPR005119 LysR, substrate-binding DOE60_RS22915 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DOE60_RS22915 IPR011701 Major facilitator superfamily DOE60_RS22915 IPR020846 Major facilitator superfamily domain DOE60_RS22915 IPR036259 MFS transporter superfamily DOE60_RS22920 IPR003333 Mycolic acid cyclopropane synthase DOE60_RS22920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE60_RS22925 IPR001783 Lumazine-binding protein DOE60_RS22925 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOE60_RS22925 IPR026017 Lumazine-binding domain DOE60_RS22925 IPR017938 Riboflavin synthase-like beta-barrel DOE60_RS22930 IPR022913 Multidrug resistance protein MdtK DOE60_RS22930 IPR002528 Multi antimicrobial extrusion protein DOE60_RS22945 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOE60_RS22945 IPR006135 Type III secretion system substrate exporter DOE60_RS22945 IPR029025 Type III secretion system substrate exporter, C-terminal DOE60_RS22950 IPR006304 Type III secretion protein SpaR/YscT DOE60_RS22950 IPR002010 Type III secretion system inner membrane R protein DOE60_RS22955 IPR002191 Bacterial export protein family 3 DOE60_RS22955 IPR006306 Type III secretion protein HrpO DOE60_RS22960 IPR005773 Yop virulence translocation protein R DOE60_RS22960 IPR005838 Type III secretion system inner membrane P protein DOE60_RS22965 IPR036429 SpoA-like superfamily DOE60_RS22965 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO DOE60_RS22965 IPR001543 Surface presentation of antigen (SpoA) DOE60_RS22965 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOE60_RS22980 IPR005714 ATPase, type III secretion system, FliI/YscN DOE60_RS22980 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE60_RS22980 IPR040627 T3SS EscN ATPase, C-terminal DOE60_RS22980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS22980 IPR003593 AAA+ ATPase domain DOE60_RS22980 IPR013380 ATPase, type III secretion system, H+-transporting DOE60_RS22985 IPR042193 FHIPEP, domain 3 DOE60_RS22985 IPR042196 FHIPEP, domain 4 DOE60_RS22985 IPR025505 FHIPEP conserved site DOE60_RS22985 IPR001712 Type III secretion system FHIPEP DOE60_RS22985 IPR006302 Type III secretion protein HrcV DOE60_RS22990 IPR017033 Type III secretion system apparatus protein SsaM DOE60_RS22995 IPR010812 Hypersensitivity response secretion-like, HrpJ DOE60_RS22995 IPR013351 Type III secretion system effector delivery regulator TyeA-related DOE60_RS23000 IPR012842 Type III secretion system HrpE/YscL DOE60_RS23010 IPR006182 Secretory protein YscJ/FliF DOE60_RS23010 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOE60_RS23050 IPR008611 Protein EaeB DOE60_RS23055 IPR006972 Secretion system effector C, SseC-like DOE60_RS23065 IPR035074 EspA/CesA-like DOE60_RS23065 IPR005095 EspA-like secreted protein DOE60_RS23085 IPR004845 Type II secretion system GspD, conserved site DOE60_RS23085 IPR038591 NolW-like superfamily DOE60_RS23085 IPR005644 NolW-like DOE60_RS23085 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOE60_RS23085 IPR004846 Type II/III secretion system DOE60_RS23095 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS23095 IPR005467 Histidine kinase domain DOE60_RS23095 IPR011006 CheY-like superfamily DOE60_RS23095 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal DOE60_RS23095 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS23095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS23095 IPR038388 RcsC, C-terminal domain superfamily DOE60_RS23095 IPR030856 Sensor histidine kinase RcsC DOE60_RS23095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS23095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS23095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS23100 IPR001789 Signal transduction response regulator, receiver domain DOE60_RS23100 IPR000792 Transcription regulator LuxR, C-terminal DOE60_RS23100 IPR011006 CheY-like superfamily DOE60_RS23100 IPR016032 Signal transduction response regulator, C-terminal effector DOE60_RS23105 IPR000551 MerR-type HTH domain DOE60_RS23105 IPR009061 Putative DNA-binding domain superfamily DOE60_RS23110 IPR013560 Domain of unknown function DUF1722 DOE60_RS23115 IPR024493 Fumarase D DOE60_RS23125 IPR003594 Histidine kinase/HSP90-like ATPase DOE60_RS23125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE60_RS23125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE60_RS23125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE60_RS23125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE60_RS23125 IPR005467 Histidine kinase domain DOE60_RS23130 IPR006311 Twin-arginine translocation pathway, signal sequence DOE60_RS23130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS23130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS23135 IPR005614 NrfD family DOE60_RS23140 IPR006657 Molybdopterin dinucleotide-binding domain DOE60_RS23140 IPR009010 Aspartate decarboxylase-like domain superfamily DOE60_RS23140 IPR006656 Molybdopterin oxidoreductase DOE60_RS23140 IPR037946 Tetrathionate reductase subunit A, MopB domain DOE60_RS23140 IPR041929 Tetrathionate reductase subunit A, N-terminal DOE60_RS23140 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE60_RS23145 IPR002139 Ribokinase/fructokinase DOE60_RS23145 IPR029056 Ribokinase-like DOE60_RS23145 IPR011611 Carbohydrate kinase PfkB DOE60_RS23145 IPR011877 Ribokinase DOE60_RS23145 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS23155 IPR029058 Alpha/Beta hydrolase fold DOE60_RS23155 IPR000073 Alpha/beta hydrolase fold-1 DOE60_RS23155 IPR002410 Peptidase S33 DOE60_RS23155 IPR005945 Proline-specific peptidase DOE60_RS23160 IPR004841 Amino acid permease/ SLC12A domain DOE60_RS23165 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS23165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS23165 IPR001697 Pyruvate kinase DOE60_RS23165 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE60_RS23165 IPR015793 Pyruvate kinase, barrel DOE60_RS23165 IPR018209 Pyruvate kinase, active site DOE60_RS23165 IPR015806 Pyruvate kinase, insert domain superfamily DOE60_RS23165 IPR036918 Pyruvate kinase, C-terminal domain superfamily DOE60_RS23165 IPR015795 Pyruvate kinase, C-terminal DOE60_RS23170 IPR016367 Murein-lipoprotein DOE60_RS23170 IPR006817 Lipoprotein leucine-zipper DOE60_RS23175 IPR038063 L,D-transpeptidase catalytic domain-like DOE60_RS23175 IPR018392 LysM domain DOE60_RS23175 IPR005490 L,D-transpeptidase catalytic domain DOE60_RS23175 IPR041597 L,D-transpeptidase C-terminal domain DOE60_RS23180 IPR003808 Fe-S metabolism associated domain, SufE-like DOE60_RS23180 IPR023939 Cysteine desulfuration protein SufE DOE60_RS23185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS23185 IPR010970 Cysteine desulfurase, SufS DOE60_RS23185 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS23185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS23185 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE60_RS23185 IPR000192 Aminotransferase class V domain DOE60_RS23190 IPR000825 SUF system FeS cluster assembly, SufBD DOE60_RS23190 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE60_RS23190 IPR011542 SUF system FeS cluster assembly, SufD DOE60_RS23195 IPR003439 ABC transporter-like DOE60_RS23195 IPR003593 AAA+ ATPase domain DOE60_RS23195 IPR010230 FeS cluster assembly SUF system, ATPase SufC DOE60_RS23195 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS23195 IPR017871 ABC transporter, conserved site DOE60_RS23200 IPR010231 SUF system FeS cluster assembly, SufB DOE60_RS23200 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE60_RS23200 IPR000825 SUF system FeS cluster assembly, SufBD DOE60_RS23205 IPR035903 HesB-like domain superfamily DOE60_RS23205 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE60_RS23205 IPR000361 FeS cluster biogenesis DOE60_RS23205 IPR016092 FeS cluster insertion protein DOE60_RS23205 IPR011298 FeS assembly scaffold SufA DOE60_RS23210 IPR001991 Sodium:dicarboxylate symporter DOE60_RS23210 IPR036458 Sodium:dicarboxylate symporter superfamily DOE60_RS23215 IPR031830 Uncharacterised protein YdiH DOE60_RS23220 IPR029069 HotDog domain superfamily DOE60_RS23220 IPR006683 Thioesterase domain DOE60_RS23220 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI DOE60_RS23220 IPR003736 Phenylacetic acid degradation-related domain DOE60_RS23225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE60_RS23225 IPR016166 FAD-binding domain, PCMH-type DOE60_RS23225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE60_RS23225 IPR016164 FAD-linked oxidase-like, C-terminal DOE60_RS23225 IPR004113 FAD-linked oxidase, C-terminal DOE60_RS23225 IPR009051 Alpha-helical ferredoxin DOE60_RS23225 IPR006094 FAD linked oxidase, N-terminal DOE60_RS23225 IPR036318 FAD-binding, type PCMH-like superfamily DOE60_RS23230 IPR002549 Transmembrane protein TqsA-like DOE60_RS23240 IPR001381 3-dehydroquinate dehydratase type I DOE60_RS23240 IPR018508 3-dehydroquinate dehydratase, active site DOE60_RS23240 IPR013785 Aldolase-type TIM barrel DOE60_RS23245 IPR013815 ATP-grasp fold, subdomain 1 DOE60_RS23245 IPR008279 PEP-utilising enzyme, mobile domain DOE60_RS23245 IPR006319 Phosphoenolpyruvate synthase DOE60_RS23245 IPR023151 PEP-utilising enzyme, conserved site DOE60_RS23245 IPR000121 PEP-utilising enzyme, C-terminal DOE60_RS23245 IPR036637 Phosphohistidine domain superfamily DOE60_RS23245 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding DOE60_RS23245 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE60_RS23245 IPR040442 Pyruvate kinase-like domain superfamily DOE60_RS23245 IPR018274 PEP-utilising enzyme, active site DOE60_RS23250 IPR026530 Phosphoenolpyruvate synthase regulatory protein DOE60_RS23250 IPR005177 Bifunctional kinase-pyrophosphorylase DOE60_RS23255 IPR006218 DAHP synthetase I/KDSA DOE60_RS23255 IPR013785 Aldolase-type TIM barrel DOE60_RS23255 IPR006219 DHAP synthase, class 1 DOE60_RS23260 IPR019600 Hemin uptake protein HemP DOE60_RS23265 IPR003846 Protein adenylyltransferase SelO DOE60_RS23275 IPR000064 Endopeptidase, NLPC/P60 domain DOE60_RS23275 IPR038765 Papain-like cysteine peptidase superfamily DOE60_RS23280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS23280 IPR023693 ABC transporter, vitamin B12, BtuD DOE60_RS23280 IPR017871 ABC transporter, conserved site DOE60_RS23280 IPR003439 ABC transporter-like DOE60_RS23280 IPR003593 AAA+ ATPase domain DOE60_RS23285 IPR000889 Glutathione peroxidase DOE60_RS23285 IPR029760 Glutathione peroxidase conserved site DOE60_RS23285 IPR036249 Thioredoxin-like superfamily DOE60_RS23285 IPR029759 Glutathione peroxidase active site DOE60_RS23285 IPR033674 Thioredoxin/glutathione peroxidase BtuE DOE60_RS23290 IPR037294 ABC transporter, BtuC-like DOE60_RS23290 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC DOE60_RS23290 IPR000522 ABC transporter, permease protein, BtuC-like DOE60_RS23295 IPR005684 Integration host factor, alpha subunit DOE60_RS23295 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE60_RS23295 IPR020816 Histone-like DNA-binding protein, conserved site DOE60_RS23295 IPR000119 Histone-like DNA-binding protein DOE60_RS23300 IPR005147 tRNA synthetase, B5-domain DOE60_RS23300 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain DOE60_RS23300 IPR002547 tRNA-binding domain DOE60_RS23300 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain DOE60_RS23300 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DOE60_RS23300 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit DOE60_RS23300 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS23300 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily DOE60_RS23300 IPR005121 Ferrodoxin-fold anticodon-binding domain DOE60_RS23300 IPR009061 Putative DNA-binding domain superfamily DOE60_RS23300 IPR005146 B3/B4 tRNA-binding domain DOE60_RS23305 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE60_RS23305 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DOE60_RS23305 IPR002319 Phenylalanyl-tRNA synthetase DOE60_RS23305 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DOE60_RS23305 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DOE60_RS23305 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS23315 IPR005813 Ribosomal protein L20 DOE60_RS23315 IPR035566 Ribosomal protein L20, C-terminal DOE60_RS23320 IPR001706 Ribosomal protein L35, non-mitochondrial DOE60_RS23320 IPR037229 Ribosomal protein L35 superfamily DOE60_RS23320 IPR018265 Ribosomal protein L35, conserved site DOE60_RS23320 IPR021137 Ribosomal protein L35 DOE60_RS23325 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DOE60_RS23325 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DOE60_RS23325 IPR019813 Translation initiation factor 3, conserved site DOE60_RS23325 IPR001288 Translation initiation factor 3 DOE60_RS23325 IPR019815 Translation initiation factor 3, C-terminal DOE60_RS23325 IPR019814 Translation initiation factor 3, N-terminal DOE60_RS23330 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE60_RS23330 IPR006195 Aminoacyl-tRNA synthetase, class II DOE60_RS23330 IPR004154 Anticodon-binding DOE60_RS23330 IPR036621 Anticodon-binding domain superfamily DOE60_RS23330 IPR012675 Beta-grasp domain superfamily DOE60_RS23330 IPR012676 TGS-like DOE60_RS23330 IPR002320 Threonine-tRNA ligase, class IIa DOE60_RS23330 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOE60_RS23330 IPR033728 Threonine-tRNA ligase catalytic core domain DOE60_RS23330 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOE60_RS23330 IPR004095 TGS DOE60_RS23335 IPR018524 DNA/RNA non-specific endonuclease, active site DOE60_RS23335 IPR001604 DNA/RNA non-specific endonuclease DOE60_RS23335 IPR020821 Extracellular Endonuclease, subunit A DOE60_RS23335 IPR040255 Non-specific endonuclease DOE60_RS23350 IPR007433 Protein of unknown function DUF481 DOE60_RS23355 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS23355 IPR011611 Carbohydrate kinase PfkB DOE60_RS23355 IPR017583 Tagatose/fructose phosphokinase DOE60_RS23355 IPR029056 Ribokinase-like DOE60_RS23360 IPR038241 Endoribonuclease antitoxin GhoS superfamily DOE60_RS23360 IPR022597 Endoribonuclease antitoxin GhoS DOE60_RS23365 IPR011009 Protein kinase-like domain superfamily DOE60_RS23365 IPR016477 Fructosamine/Ketosamine-3-kinase DOE60_RS23370 IPR025229 YniB-like protein DOE60_RS23375 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE60_RS23375 IPR023214 HAD superfamily DOE60_RS23375 IPR041492 Haloacid dehalogenase-like hydrolase DOE60_RS23375 IPR006439 HAD hydrolase, subfamily IA DOE60_RS23375 IPR036412 HAD-like superfamily DOE60_RS23380 IPR016956 Inner membrane protein YdjM DOE60_RS23380 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE60_RS23385 IPR001991 Sodium:dicarboxylate symporter DOE60_RS23385 IPR036458 Sodium:dicarboxylate symporter superfamily DOE60_RS23390 IPR019666 Cell division activator CedA DOE60_RS23390 IPR038463 CedA-like superfamily DOE60_RS23395 IPR024708 Catalase active site DOE60_RS23395 IPR018028 Catalase, mono-functional, haem-containing DOE60_RS23395 IPR002226 Catalase haem-binding site DOE60_RS23395 IPR041399 Large catalase, C-terminal domain DOE60_RS23395 IPR037060 Catalase core domain superfamily DOE60_RS23395 IPR010582 Catalase immune-responsive domain DOE60_RS23395 IPR024712 Catalase, mono-functional, haem-containing, clade 2 DOE60_RS23395 IPR020835 Catalase superfamily DOE60_RS23395 IPR011614 Catalase core domain DOE60_RS23395 IPR029062 Class I glutamine amidotransferase-like DOE60_RS23400 IPR006879 Carbohydrate deacetylase YdjC-like DOE60_RS23400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE60_RS23400 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria DOE60_RS23405 IPR036291 NAD(P)-binding domain superfamily DOE60_RS23405 IPR019802 Glycoside hydrolase, family 4, conserved site DOE60_RS23405 IPR001088 Glycoside hydrolase, family 4 DOE60_RS23405 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE60_RS23405 IPR022616 Glycosyl hydrolase, family 4, C-terminal DOE60_RS23410 IPR018062 HTH domain AraC-type, conserved site DOE60_RS23410 IPR013096 Cupin 2, conserved barrel DOE60_RS23410 IPR009057 Homeobox-like domain superfamily DOE60_RS23410 IPR020449 Transcription regulator HTH, AraC- type DOE60_RS23410 IPR011051 RmlC-like cupin domain superfamily DOE60_RS23410 IPR014710 RmlC-like jelly roll fold DOE60_RS23410 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS23415 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily DOE60_RS23415 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit DOE60_RS23420 IPR003352 Phosphotransferase system, EIIC DOE60_RS23420 IPR004796 Phosphotransferase system, cellobiose-type IIC component DOE60_RS23420 IPR004501 Phosphotransferase system, EIIC component, type 3 DOE60_RS23425 IPR036095 PTS system IIB component-like superfamily DOE60_RS23425 IPR013012 Phosphotransferase system, EIIB component, type 3 DOE60_RS23425 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE60_RS23430 IPR007450 Lipoprotein SmpA/OmlA DOE60_RS23430 IPR037873 BamE-like DOE60_RS23435 IPR003694 NAD(+) synthetase DOE60_RS23435 IPR022310 NAD/GMP synthase DOE60_RS23435 IPR022926 NH(3)-dependent NAD(+) synthetase DOE60_RS23435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE60_RS23440 IPR000305 GIY-YIG endonuclease DOE60_RS23440 IPR035901 GIY-YIG endonuclease superfamily DOE60_RS23445 IPR012899 LTXXQ motif family protein DOE60_RS23455 IPR016681 Succinylglutamate desuccinylase DOE60_RS23455 IPR007036 Succinylglutamate desuccinylase/aspartoacylase DOE60_RS23460 IPR007079 Succinylarginine dihydrolase DOE60_RS23460 IPR037031 Succinylarginine dihydrolase superfamily DOE60_RS23465 IPR016162 Aldehyde dehydrogenase, N-terminal DOE60_RS23465 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE60_RS23465 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE60_RS23465 IPR016163 Aldehyde dehydrogenase, C-terminal DOE60_RS23465 IPR016161 Aldehyde/histidinol dehydrogenase DOE60_RS23465 IPR015590 Aldehyde dehydrogenase domain DOE60_RS23465 IPR017649 Succinylglutamate-semialdehyde dehydrogenase DOE60_RS23470 IPR016181 Acyl-CoA N-acyltransferase DOE60_RS23470 IPR007041 Arginine N-succinyltransferase AstA/AruG DOE60_RS23470 IPR017650 Arginine N-succinyltransferase DOE60_RS23475 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DOE60_RS23475 IPR026330 Succinylornithine transaminase DOE60_RS23475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE60_RS23475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE60_RS23475 IPR015424 Pyridoxal phosphate-dependent transferase DOE60_RS23475 IPR005814 Aminotransferase class-III DOE60_RS23475 IPR004636 Acetylornithine/Succinylornithine transaminase family DOE60_RS23480 IPR004808 AP endonuclease 1 DOE60_RS23480 IPR020847 AP endonuclease 1, binding site DOE60_RS23480 IPR020848 AP endonuclease 1, conserved site DOE60_RS23480 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE60_RS23480 IPR005135 Endonuclease/exonuclease/phosphatase DOE60_RS23480 IPR037493 Exodeoxyribonuclease III-like DOE60_RS23485 IPR020084 NUDIX hydrolase, conserved site DOE60_RS23485 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS23485 IPR000086 NUDIX hydrolase domain DOE60_RS23485 IPR020476 NUDIX hydrolase DOE60_RS23490 IPR009971 Protein of unknown function DUF1496 DOE60_RS23495 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DOE60_RS23495 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DOE60_RS23495 IPR036291 NAD(P)-binding domain superfamily DOE60_RS23495 IPR033524 Leu/Phe/Val dehydrogenases active site DOE60_RS23495 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DOE60_RS23495 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DOE60_RS23495 IPR014362 Glutamate dehydrogenase DOE60_RS23500 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE60_RS23500 IPR034144 DNA topoisomerase 3-like, TOPRIM domain DOE60_RS23500 IPR006171 TOPRIM domain DOE60_RS23500 IPR005738 DNA topoisomerase III DOE60_RS23500 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DOE60_RS23500 IPR023405 DNA topoisomerase, type IA, core domain DOE60_RS23500 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE60_RS23500 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE60_RS23500 IPR000380 DNA topoisomerase, type IA DOE60_RS23500 IPR003601 DNA topoisomerase, type IA, domain 2 DOE60_RS23500 IPR023406 DNA topoisomerase, type IA, active site DOE60_RS23500 IPR013497 DNA topoisomerase, type IA, central DOE60_RS23505 IPR023061 Selenophosphate synthetase, class I DOE60_RS23505 IPR036676 PurM-like, C-terminal domain superfamily DOE60_RS23505 IPR016188 PurM-like, N-terminal domain DOE60_RS23505 IPR036921 PurM-like, N-terminal domain superfamily DOE60_RS23505 IPR004536 Selenophosphate synthetase DOE60_RS23505 IPR010918 PurM-like, C-terminal domain DOE60_RS23510 IPR029479 Nitroreductase DOE60_RS23510 IPR000415 Nitroreductase-like DOE60_RS23510 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DOE60_RS23515 IPR004635 Peptidase S49, SppA DOE60_RS23515 IPR002142 Peptidase S49 DOE60_RS23515 IPR029045 ClpP/crotonase-like domain superfamily DOE60_RS23515 IPR033854 Signal peptide peptidase A DOE60_RS23515 IPR004634 Peptidase S49, protease IV DOE60_RS23520 IPR027473 L-asparaginase, C-terminal DOE60_RS23520 IPR040919 Asparaginase/glutaminase, C-terminal DOE60_RS23520 IPR027474 L-asparaginase, N-terminal DOE60_RS23520 IPR037152 L-asparaginase, N-terminal domain superfamily DOE60_RS23520 IPR027475 Asparaginase/glutaminase, active site 2 DOE60_RS23520 IPR020827 Asparaginase/glutaminase, active site 1 DOE60_RS23520 IPR006034 Asparaginase/glutaminase-like DOE60_RS23520 IPR036152 Asparaginase/glutaminase-like superfamily DOE60_RS23520 IPR006033 Type I L-asparaginase family DOE60_RS23520 IPR041725 Type I (cytosolic) L-asparaginase DOE60_RS23525 IPR000868 Isochorismatase-like DOE60_RS23525 IPR036380 Isochorismatase-like superfamily DOE60_RS23530 IPR020846 Major facilitator superfamily domain DOE60_RS23530 IPR005828 Major facilitator, sugar transporter-like DOE60_RS23530 IPR036259 MFS transporter superfamily DOE60_RS23535 IPR037171 NagB/RpiA transferase-like DOE60_RS23535 IPR036390 Winged helix DNA-binding domain superfamily DOE60_RS23535 IPR036388 Winged helix-like DNA-binding domain superfamily DOE60_RS23535 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE60_RS23535 IPR014036 DeoR C-terminal sensor domain DOE60_RS23535 IPR001034 DeoR-type HTH domain DOE60_RS23540 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS23540 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS23540 IPR020471 Aldo/keto reductase DOE60_RS23545 IPR002139 Ribokinase/fructokinase DOE60_RS23545 IPR029056 Ribokinase-like DOE60_RS23545 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE60_RS23545 IPR011611 Carbohydrate kinase PfkB DOE60_RS23550 IPR000771 Fructose-bisphosphate aldolase, class-II DOE60_RS23550 IPR013785 Aldolase-type TIM barrel DOE60_RS23555 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS23555 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS23555 IPR011032 GroES-like superfamily DOE60_RS23555 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS23555 IPR020843 Polyketide synthase, enoylreductase domain DOE60_RS23555 IPR036291 NAD(P)-binding domain superfamily DOE60_RS23560 IPR036259 MFS transporter superfamily DOE60_RS23560 IPR005828 Major facilitator, sugar transporter-like DOE60_RS23560 IPR020846 Major facilitator superfamily domain DOE60_RS23565 IPR011032 GroES-like superfamily DOE60_RS23565 IPR013149 Alcohol dehydrogenase, C-terminal DOE60_RS23565 IPR013154 Alcohol dehydrogenase, N-terminal DOE60_RS23565 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE60_RS23565 IPR036291 NAD(P)-binding domain superfamily DOE60_RS23575 IPR009749 Protein of unknown function DUF1315 DOE60_RS23580 IPR002579 Peptide methionine sulphoxide reductase MrsB DOE60_RS23580 IPR028427 Peptide methionine sulfoxide reductase DOE60_RS23580 IPR011057 Mss4-like superfamily DOE60_RS23585 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DOE60_RS23585 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DOE60_RS23585 IPR036291 NAD(P)-binding domain superfamily DOE60_RS23585 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DOE60_RS23585 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DOE60_RS23585 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DOE60_RS23595 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE60_RS23595 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE60_RS23595 IPR025532 Glucose-6-phosphate 1-epimerase DOE60_RS23595 IPR011013 Galactose mutarotase-like domain superfamily DOE60_RS23600 IPR023210 NADP-dependent oxidoreductase domain DOE60_RS23600 IPR020471 Aldo/keto reductase DOE60_RS23600 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE60_RS23605 IPR023885 4Fe4S-binding SPASM domain DOE60_RS23605 IPR007197 Radical SAM DOE60_RS23605 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE60_RS23605 IPR013785 Aldolase-type TIM barrel DOE60_RS23610 IPR010583 MltA-interacting MipA DOE60_RS23615 IPR016230 Serine-protein kinase, PrkA DOE60_RS23615 IPR010650 PrkA C-terminal domain DOE60_RS23615 IPR013153 PrkA AAA domain DOE60_RS23615 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS23620 IPR006698 Uncharacterised protein family UPF0229 DOE60_RS23630 IPR000160 GGDEF domain DOE60_RS23630 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 DOE60_RS23630 IPR029787 Nucleotide cyclase DOE60_RS23635 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE60_RS23635 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE60_RS23645 IPR007382 Uncharacterised protein family UPF0756, transmembrame DOE60_RS23650 IPR018062 HTH domain AraC-type, conserved site DOE60_RS23650 IPR014710 RmlC-like jelly roll fold DOE60_RS23650 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE60_RS23650 IPR009057 Homeobox-like domain superfamily DOE60_RS23650 IPR011051 RmlC-like cupin domain superfamily DOE60_RS23650 IPR018060 DNA binding HTH domain, AraC-type DOE60_RS23655 IPR020846 Major facilitator superfamily domain DOE60_RS23655 IPR004747 Cyanate transport system protein DOE60_RS23655 IPR011701 Major facilitator superfamily DOE60_RS23655 IPR036259 MFS transporter superfamily DOE60_RS23660 IPR007438 Protein of unknown function DUF488 DOE60_RS23670 IPR005590 Protein of unknown function DUF333 DOE60_RS23680 IPR007341 Transglycosylase-associated protein DOE60_RS23695 IPR036489 YoaG superfamily DOE60_RS23695 IPR015051 Protein YoaG DOE60_RS23700 IPR015392 Domain of unknown function DUF1971 DOE60_RS23700 IPR014710 RmlC-like jelly roll fold DOE60_RS23700 IPR014510 Tellurite resistance predicted, YeaR DOE60_RS23710 IPR001123 Amino acid exporter protein, LeuE-type DOE60_RS23720 IPR008240 Chorismate mutase, periplasmic DOE60_RS23720 IPR002701 Chorismate mutase II, prokaryotic-type DOE60_RS23720 IPR036263 Chorismate mutase type II superfamily DOE60_RS23735 IPR015358 Transcription regulator MerR, DNA binding DOE60_RS23735 IPR009061 Putative DNA-binding domain superfamily DOE60_RS23735 IPR000551 MerR-type HTH domain DOE60_RS23735 IPR011789 Cu(I)-responsive transcriptional regulator DOE60_RS23745 IPR025184 Domain of unknown function DUF4111 DOE60_RS23745 IPR002934 Polymerase, nucleotidyl transferase domain DOE60_RS23745 IPR024172 Streptomycin 3''-adenylyltransferase DOE60_RS23750 IPR012674 Calycin DOE60_RS23750 IPR015304 ZinT domain DOE60_RS23765 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE60_RS23765 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE60_RS23765 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE60_RS23765 IPR010920 LSM domain superfamily DOE60_RS23765 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE60_RS23765 IPR006685 Mechanosensitive ion channel MscS DOE60_RS23770 IPR003439 ABC transporter-like DOE60_RS23770 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS23770 IPR014137 Nickel import ATP-binding protein NikE DOE60_RS23770 IPR015858 ABC transporter, nickel import, NikE DOE60_RS23770 IPR017871 ABC transporter, conserved site DOE60_RS23770 IPR003593 AAA+ ATPase domain DOE60_RS23775 IPR003439 ABC transporter-like DOE60_RS23775 IPR017871 ABC transporter, conserved site DOE60_RS23775 IPR015857 ABC transporter, nickel import, NikD DOE60_RS23775 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE60_RS23775 IPR014138 Nickel import ATP-binding protein NikD DOE60_RS23775 IPR003593 AAA+ ATPase domain DOE60_RS23780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS23780 IPR035906 MetI-like superfamily DOE60_RS23780 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE60_RS23785 IPR035906 MetI-like superfamily DOE60_RS23785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE60_RS23790 IPR000914 Solute-binding protein family 5 domain DOE60_RS23790 IPR011980 Nickel ABC transporter, substrate-binding protein NikA DOE60_RS23790 IPR030678 Peptide/nickel binding protein, MppA-type DOE60_RS23790 IPR023765 Solute-binding protein family 5, conserved site DOE60_RS23790 IPR039424 Solute-binding protein family 5 DOE60_RS23805 IPR016174 Di-haem cytochrome, transmembrane DOE60_RS23805 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE60_RS23815 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE60_RS23815 IPR008978 HSP20-like chaperone DOE60_RS23815 IPR002068 Alpha crystallin/Hsp20 domain DOE60_RS23845 IPR000758 Virulence-related outer membrane protein DOE60_RS23845 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE60_RS23865 IPR011129 Cold shock domain DOE60_RS23865 IPR002059 Cold-shock protein, DNA-binding DOE60_RS23865 IPR012340 Nucleic acid-binding, OB-fold DOE60_RS23865 IPR012156 Cold shock, CspA DOE60_RS23865 IPR019844 Cold-shock (CSD) domain DOE60_RS23870 IPR000772 Ricin B, lectin domain DOE60_RS23870 IPR035992 Ricin B-like lectins DOE60_RS23875 IPR010391 DNA damage-inducible protein DinI-like DOE60_RS23875 IPR036687 DinI-like superfamily DOE60_RS23880 IPR012332 P22 tailspike-like, C-terminal domain superfamily DOE60_RS23880 IPR005546 Autotransporter beta-domain DOE60_RS23880 IPR011050 Pectin lyase fold/virulence factor DOE60_RS23880 IPR000710 Peptidase S6, IgA endopeptidase DOE60_RS23880 IPR009003 Peptidase S1, PA clan DOE60_RS23880 IPR036709 Autotransporter beta-domain superfamily DOE60_RS23880 IPR030396 Peptidase family S6 domain DOE60_RS23880 IPR006315 Outer membrane autotransporter barrel DOE60_RS23890 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOE60_RS23900 IPR010438 Bor DOE60_RS23905 IPR020080 Outer membrane adhesin/peptidase omptin DOE60_RS23905 IPR020079 Peptidase A26, omptin, conserved site DOE60_RS23905 IPR000036 Peptidase A26, omptin DOE60_RS23915 IPR003591 Leucine-rich repeat, typical subtype DOE60_RS23915 IPR001611 Leucine-rich repeat DOE60_RS23915 IPR032674 LRR-containing bacterial E3 ligase, N-terminal DOE60_RS23915 IPR032675 Leucine-rich repeat domain superfamily DOE60_RS23915 IPR029487 Novel E3 ligase domain DOE60_RS23920 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic DOE60_RS23920 IPR024084 Isopropylmalate dehydrogenase-like domain DOE60_RS23920 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOE60_RS23925 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE60_RS23925 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE60_RS23925 IPR006145 Pseudouridine synthase, RsuA/RluA DOE60_RS23925 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE60_RS23925 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE60_RS23935 IPR000086 NUDIX hydrolase domain DOE60_RS23935 IPR033713 Phosphatase NudJ DOE60_RS23935 IPR015797 NUDIX hydrolase-like domain superfamily DOE60_RS23935 IPR020476 NUDIX hydrolase DOE60_RS23935 IPR020084 NUDIX hydrolase, conserved site DOE60_RS23945 IPR000769 Regulatory protein Rop DOE60_RS23945 IPR035962 Rop-like superfamily DOE60_RS23950 IPR008687 Bacterial mobilisation DOE60_RS23955 IPR005094 Endonuclease relaxase, MobA/VirD2 DOE60_RS23990 IPR005053 MobA/MobL protein