locus-tag	class	description
DOE60_RS00015	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DOE60_RS00030	COG2850	peptidyl-arginine hydroxylation
DOE60_RS00060	COG1177	transmembrane transport
DOE60_RS00080	COG4591	ABC-type transport system involved in lipoprotein release permease component
DOE60_RS00085	COG1136	(ABC) transporter
DOE60_RS00090	COG4591	ABC-type transport system involved in lipoprotein release permease component
DOE60_RS00095	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DOE60_RS00100	COG1388	LysM domain
DOE60_RS00100	COG1376	ErfK ybiS ycfS ynhG family protein
DOE60_RS00110	COG1309	transcriptional regulator
DOE60_RS00115	COG3134	Outer membrane lipoprotein
DOE60_RS00120	COG1252	NADH dehydrogenase
DOE60_RS00145	COG5633	Lipoprotein
DOE60_RS00150	COG0537	adenosine 5'-monophosphoramidase activity
DOE60_RS00155	COG4773	Receptor
DOE60_RS00165	COG0084	hydrolase, TatD family'
DOE60_RS00170	COG0470	DNA polymerase III
DOE60_RS00180	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DOE60_RS00220	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DOE60_RS00275	COG1530	ribonuclease E activity
DOE60_RS00370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DOE60_RS00380	COG2999	glutathione oxidoreductase activity
DOE60_RS00415	COG3038	cytochrome b561
DOE60_RS00430	COG1560	Kdo2-lipid A biosynthetic process
DOE60_RS00450	COG5645	(Lipo)protein
DOE60_RS00455	COG2943	transferase activity, transferring hexosyl groups
DOE60_RS00470	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOE60_RS00530	COG3381	protein complex oligomerization
DOE60_RS00600	COG1309	transcriptional regulator
DOE60_RS00605	COG3729	General stress protein
DOE60_RS00625	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DOE60_RS00630	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DOE60_RS00630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DOE60_RS00635	COG4232	protein-disulfide reductase activity
DOE60_RS00690	COG3971	2-oxopent-4-enoate hydratase activity
DOE60_RS00700	COG3384	dioxygenase
DOE60_RS00705	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS00715	COG1846	Transcriptional regulator
DOE60_RS00720	COG2368	4-hydroxyphenylacetate
DOE60_RS00745	COG0745	RESPONSE REGULATOR receiver
DOE60_RS00750	COG2205	protein histidine kinase activity
DOE60_RS00835	COG0670	Belongs to the BI1 family
DOE60_RS00855	COG1881	PFAM PEBP family protein
DOE60_RS00870	COG1832	CoA-binding protein
DOE60_RS00890	COG3304	Inner membrane component domain
DOE60_RS00895	COG1289	transmembrane transporter activity
DOE60_RS00900	COG3070	regulator of competence-specific genes
DOE60_RS00920	COG1067	ATP-dependent peptidase activity
DOE60_RS00930	COG3130	regulation of translation
DOE60_RS00935	COG3009	Protein conserved in bacteria
DOE60_RS00940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DOE60_RS00940	COG3008	intermembrane lipid transfer
DOE60_RS00945	COG2995	paraquat-inducible protein a
DOE60_RS00950	COG0488	(ABC) transporter
DOE60_RS00960	COG3217	Mosc domain protein beta barrel domain protein
DOE60_RS00960	COG0633	Ferredoxin
DOE60_RS00975	COG0308	aminopeptidase N
DOE60_RS00985	COG3021	interspecies interaction between organisms
DOE60_RS01070	COG0582	viral genome integration into host DNA
DOE60_RS01085	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DOE60_RS01095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DOE60_RS01100	COG3108	Peptidase M15
DOE60_RS01120	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
DOE60_RS01130	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DOE60_RS01135	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DOE60_RS01140	COG3173	Aminoglycoside phosphotransferase
DOE60_RS01155	COG3214	Protein conserved in bacteria
DOE60_RS01170	COG0658	competence protein
DOE60_RS01170	COG2333	competence protein COMEC
DOE60_RS01180	COG0539	negative regulation of cytoplasmic translation
DOE60_RS01195	COG0501	Belongs to the peptidase M48B family
DOE60_RS01210	COG2323	membrane
DOE60_RS01215	COG1944	ATP diphosphatase activity
DOE60_RS01220	COG2116	formate transmembrane transporter activity
DOE60_RS01225	COG1882	Formate acetyltransferase
DOE60_RS01235	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOE60_RS01245	COG0531	amino acid
DOE60_RS01260	COG3302	dmso reductase anchor subunit
DOE60_RS01265	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS01270	COG0243	molybdopterin cofactor binding
DOE60_RS01285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DOE60_RS01310	COG0492	ferredoxin-NADP+ reductase activity
DOE60_RS01315	COG4988	ABC transporter
DOE60_RS01320	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DOE60_RS01350	COG1335	isochorismatase
DOE60_RS01360	COG0542	response to heat
DOE60_RS01370	COG1278	Cold shock
DOE60_RS01380	COG1136	(ABC) transporter
DOE60_RS01380	COG0577	efflux transmembrane transporter activity
DOE60_RS01385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS01390	COG2990	Protein conserved in bacteria
DOE60_RS01395	COG3593	DNA synthesis involved in DNA repair
DOE60_RS01405	COG2431	L-lysine efflux transmembrane transporter activity
DOE60_RS01415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DOE60_RS01420	COG0028	Belongs to the TPP enzyme family
DOE60_RS01425	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DOE60_RS01430	COG0702	epimerase
DOE60_RS01435	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DOE60_RS01440	COG3023	N-Acetylmuramoyl-L-alanine amidase
DOE60_RS01455	COG1126	abc transporter atp-binding protein
DOE60_RS01460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS01465	COG4215	(ABC) transporter
DOE60_RS01470	COG4160	amino acid transport
DOE60_RS01475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS01515	COG1177	transmembrane transport
DOE60_RS01520	COG1176	ABC-type spermidine putrescine transport system, permease component I
DOE60_RS01525	COG3842	ATPase activity
DOE60_RS01530	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DOE60_RS01575	COG3226	Transcriptional regulator
DOE60_RS01580	COG0738	Major facilitator superfamily
DOE60_RS01585	COG0561	phosphatase activity
DOE60_RS01590	COG2814	Major facilitator Superfamily
DOE60_RS01595	COG0671	phosphoesterase, PA-phosphatase related
DOE60_RS01600	COG1349	DNA-binding transcription factor activity
DOE60_RS01605	COG1686	Belongs to the peptidase S11 family
DOE60_RS01610	COG0625	glutathione transferase activity
DOE60_RS01615	COG2133	pyrroloquinoline quinone binding
DOE60_RS01640	COG0747	negative chemotaxis
DOE60_RS01660	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOE60_RS01665	COG1882	Formate acetyltransferase
DOE60_RS01685	COG0561	phosphatase activity
DOE60_RS01695	COG0488	(ABC) transporter
DOE60_RS01700	COG1376	ErfK ybiS ycfS ynhG family protein
DOE60_RS01705	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DOE60_RS01720	COG2194	sulfuric ester hydrolase activity
DOE60_RS01725	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DOE60_RS01745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS01750	COG0765	amino acid transport
DOE60_RS01755	COG1126	abc transporter atp-binding protein
DOE60_RS01760	COG0668	transmembrane transport
DOE60_RS01770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DOE60_RS01780	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DOE60_RS01790	COG0513	Belongs to the DEAD box helicase family
DOE60_RS01795	COG1309	transcriptional regulator
DOE60_RS01800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS01810	COG0842	Transport permease protein
DOE60_RS01815	COG0842	Transport permease protein
DOE60_RS01825	COG3568	Endonuclease Exonuclease Phosphatase
DOE60_RS01830	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOE60_RS01835	COG0392	lysyltransferase activity
DOE60_RS01860	COG0670	Belongs to the BI1 family
DOE60_RS01870	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DOE60_RS01880	COG0521	Mo-molybdopterin cofactor biosynthetic process
DOE60_RS01930	COG1881	PFAM PEBP family protein
DOE60_RS01960	COG4677	pectinesterase activity
DOE60_RS01965	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DOE60_RS01970	COG0471	metal ion transport
DOE60_RS01975	COG2828	Protein conserved in bacteria
DOE60_RS01980	COG0583	DNA-binding transcription factor activity
DOE60_RS01990	COG0561	phosphatase activity
DOE60_RS02000	COG4149	molybdate abc transporter
DOE60_RS02005	COG0725	ABC transporter, periplasmic molybdate-binding protein
DOE60_RS02015	COG2005	Transcriptional regulator
DOE60_RS02015	COG3585	molybdate ion transport
DOE60_RS02020	COG1119	ATPase activity
DOE60_RS02045	COG2017	converts alpha-aldose to the beta-anomer
DOE60_RS02060	COG1120	ATPase activity
DOE60_RS02065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DOE60_RS02070	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DOE60_RS02125	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DOE60_RS02130	COG2885	chlorophyll binding
DOE60_RS02140	COG3064	Membrane
DOE60_RS02145	COG0848	biopolymer transport protein
DOE60_RS02150	COG0811	peptide transport
DOE60_RS02155	COG0824	Thioesterase
DOE60_RS02160	COG3790	cyd operon protein YbgE
DOE60_RS02170	COG4890	Cyd operon protein YbgT
DOE60_RS02175	COG1294	oxidase, subunit
DOE60_RS02180	COG1271	oxidase subunit
DOE60_RS02190	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DOE60_RS02200	COG0508	dehydrogenase complex catalyzes the overall conversion of
DOE60_RS02205	COG0567	Dehydrogenase, E1 component
DOE60_RS02220	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DOE60_RS02245	COG3180	Ammonia monooxygenase
DOE60_RS02260	COG0438	transferase activity, transferring glycosyl groups
DOE60_RS02310	COG0582	viral genome integration into host DNA
DOE60_RS02325	COG1984	allophanate hydrolase subunit 2
DOE60_RS02330	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DOE60_RS02365	COG3157	Type VI secretion system effector, Hcp
DOE60_RS02395	COG2205	protein histidine kinase activity
DOE60_RS02400	COG0745	RESPONSE REGULATOR receiver
DOE60_RS02410	COG1982	Orn Lys Arg decarboxylase major
DOE60_RS02415	COG0531	amino acid
DOE60_RS02425	COG0033	Phosphoglucomutase
DOE60_RS02435	COG0596	Alpha beta hydrolase
DOE60_RS02450	COG0735	belongs to the Fur family
DOE60_RS02455	COG0583	DNA-binding transcription factor activity
DOE60_RS02460	COG1053	succinate dehydrogenase
DOE60_RS02515	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOE60_RS02520	COG1846	Transcriptional regulator
DOE60_RS02520	COG1940	carbohydrate kinase activity
DOE60_RS02525	COG0647	UMP catabolic process
DOE60_RS02530	COG0367	asparagine synthase
DOE60_RS02575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DOE60_RS02585	COG1702	phosphate starvation-inducible protein PhoH
DOE60_RS02610	COG0765	amino acid transport
DOE60_RS02615	COG0765	amino acid transport
DOE60_RS02620	COG1126	abc transporter atp-binding protein
DOE60_RS02630	COG2888	peptidyl-tyrosine sulfation
DOE60_RS02650	COG1466	dna polymerase III delta subunit
DOE60_RS02660	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DOE60_RS02670	COG0799	negative regulation of ribosome biogenesis
DOE60_RS02680	COG0768	penicillin binding
DOE60_RS02685	COG0772	Belongs to the SEDS family
DOE60_RS02690	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DOE60_RS02695	COG1686	Belongs to the peptidase S11 family
DOE60_RS02710	COG0583	DNA-binding transcription factor activity
DOE60_RS02725	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DOE60_RS02745	COG3069	C4-dicarboxylate transmembrane transporter activity
DOE60_RS02750	COG4565	transcriptional regulatory protein
DOE60_RS02765	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DOE60_RS02775	COG2301	Belongs to the HpcH HpaI aldolase family
DOE60_RS02780	COG3051	citrate lyase alpha subunit
DOE60_RS02795	COG0471	metal ion transport
DOE60_RS02800	COG3719	Belongs to the RNase T2 family
DOE60_RS02810	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DOE60_RS02815	COG1063	alcohol dehydrogenase
DOE60_RS02835	COG0243	molybdopterin cofactor binding
DOE60_RS02855	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DOE60_RS02865	COG0583	DNA-binding transcription factor activity
DOE60_RS02870	COG3969	phosphoadenosine phosphosulfate
DOE60_RS02875	COG1475	DNA binding
DOE60_RS02880	COG0436	Aminotransferase
DOE60_RS02885	COG0371	Dehydrogenase
DOE60_RS02890	COG2879	small protein
DOE60_RS02895	COG1966	Carbon starvation protein
DOE60_RS02905	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS02910	COG1535	isochorismatase
DOE60_RS02910	COG3433	isochorismatase activity
DOE60_RS02915	COG1021	2,3-dihydroxybenzoate-AMP ligase
DOE60_RS02920	COG1169	isochorismate synthase
DOE60_RS02925	COG4592	Periplasmic binding protein
DOE60_RS02935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DOE60_RS02940	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DOE60_RS02945	COG1120	ATPase activity
DOE60_RS02950	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
DOE60_RS02955	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DOE60_RS02955	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DOE60_RS02960	COG3251	PFAM MbtH domain protein
DOE60_RS02965	COG2382	esterase
DOE60_RS02970	COG4771	TonB-dependent receptor
DOE60_RS02975	COG2977	Belongs to the P-Pant transferase superfamily
DOE60_RS03000	COG2315	Protein conserved in bacteria
DOE60_RS03025	COG3716	PTS system mannose fructose sorbose family IID component
DOE60_RS03035	COG2222	sugar isomerase
DOE60_RS03040	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DOE60_RS03040	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DOE60_RS03055	COG0668	transmembrane transport
DOE60_RS03060	COG1113	amino acid transport
DOE60_RS03070	COG3059	membrane
DOE60_RS03080	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DOE60_RS03085	COG2207	Transcriptional regulator
DOE60_RS03090	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DOE60_RS03095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS03100	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS03105	COG1538	Outer membrane efflux protein
DOE60_RS03110	COG0745	RESPONSE REGULATOR receiver
DOE60_RS03115	COG5002	protein histidine kinase activity
DOE60_RS03195	COG2501	S4 domain
DOE60_RS03200	COG1988	membrane-bound metal-dependent
DOE60_RS03210	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DOE60_RS03230	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DOE60_RS03250	COG1464	Belongs to the NlpA lipoprotein family
DOE60_RS03260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DOE60_RS03265	COG4181	ATPase activity
DOE60_RS03270	COG2755	lipolytic protein G-D-S-L family
DOE60_RS03275	COG0300	oxidoreductase activity
DOE60_RS03280	COG3118	belongs to the thioredoxin family
DOE60_RS03285	COG0390	transport system, permease component
DOE60_RS03290	COG4619	ABC transporter
DOE60_RS03295	COG0330	HflC and HflK could
DOE60_RS03300	COG1585	Membrane protein implicated in regulation of membrane protease activity
DOE60_RS03310	COG2217	Heavy metal translocating P-type atpase
DOE60_RS03330	COG2223	nitrite transmembrane transporter activity
DOE60_RS03335	COG4651	solute:proton antiporter activity
DOE60_RS03335	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DOE60_RS03340	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS03400	COG2832	Protein of unknown function (DUF454)
DOE60_RS03405	COG3923	Primosomal replication protein n
DOE60_RS03425	COG1196	nuclear chromosome segregation
DOE60_RS03425	COG3264	Mechanosensitive ion channel
DOE60_RS03430	COG1309	transcriptional regulator
DOE60_RS03435	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS03440	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DOE60_RS03455	COG0110	maltose O-acetyltransferase activity
DOE60_RS03475	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DOE60_RS03490	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DOE60_RS03495	COG1946	Acyl-CoA thioesterase
DOE60_RS03500	COG0004	ammonium transporteR
DOE60_RS03505	COG0347	Belongs to the P(II) protein family
DOE60_RS03510	COG1132	(ABC) transporter
DOE60_RS03515	COG1132	(ABC) transporter
DOE60_RS03520	COG1522	sequence-specific DNA binding
DOE60_RS03530	COG0561	phosphatase activity
DOE60_RS03535	COG4533	DNA binding
DOE60_RS03545	COG0824	Thioesterase
DOE60_RS03550	COG1555	photosystem II stabilization
DOE60_RS03555	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DOE60_RS03565	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DOE60_RS03595	COG0271	Belongs to the BolA IbaG family
DOE60_RS03600	COG3056	Lipoprotein
DOE60_RS03605	COG2223	nitrite transmembrane transporter activity
DOE60_RS03610	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DOE60_RS03615	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DOE60_RS03620	COG1845	cytochrome c oxidase, subunit III
DOE60_RS03625	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DOE60_RS03640	COG2814	Major facilitator Superfamily
DOE60_RS03665	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS03670	COG0243	molybdopterin cofactor binding
DOE60_RS03690	COG0142	geranyltranstransferase activity
DOE60_RS03700	COG0667	Aldo Keto reductase
DOE60_RS03705	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DOE60_RS03725	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DOE60_RS03725	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DOE60_RS03735	COG4238	major outer membrane lipoprotein
DOE60_RS03750	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DOE60_RS03760	COG1862	Preprotein translocase
DOE60_RS03785	COG0450	alkyl hydroperoxide reductase
DOE60_RS03790	COG0366	Alpha amylase catalytic
DOE60_RS03805	COG5002	protein histidine kinase activity
DOE60_RS03815	COG0420	3'-5' exonuclease activity
DOE60_RS03820	COG0419	ATPase involved in DNA repair
DOE60_RS03825	COG3539	Fimbrial protein
DOE60_RS03845	COG2814	Major facilitator Superfamily
DOE60_RS03850	COG1940	carbohydrate kinase activity
DOE60_RS03865	COG4126	flavin adenine dinucleotide binding
DOE60_RS03885	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DOE60_RS03890	COG3706	GGDEF domain
DOE60_RS03940	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
DOE60_RS03950	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DOE60_RS03965	COG0113	porphobilinogen synthase activity
DOE60_RS04000	COG1280	lysine exporter protein (LysE YggA)
DOE60_RS04020	COG1294	oxidase, subunit
DOE60_RS04025	COG1271	oxidase subunit
DOE60_RS04045	COG2814	Major facilitator Superfamily
DOE60_RS04055	COG0789	Transcriptional regulator
DOE60_RS04065	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS04110	COG2200	EAL domain
DOE60_RS04130	COG3539	Fimbrial protein
DOE60_RS04135	COG3121	Chaperone
DOE60_RS04140	COG3188	usher protein
DOE60_RS04155	COG2211	Major facilitator Superfamily
DOE60_RS04175	COG2149	membrane
DOE60_RS04185	COG0583	DNA-binding transcription factor activity
DOE60_RS04200	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DOE60_RS04210	COG3023	N-Acetylmuramoyl-L-alanine amidase
DOE60_RS04360	COG2369	cell adhesion
DOE60_RS04390	COG3179	chitinase
DOE60_RS04495	COG1484	DNA-dependent DNA replication
DOE60_RS04530	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DOE60_RS04550	COG0582	viral genome integration into host DNA
DOE60_RS04590	COG2195	Cleaves the N-terminal amino acid of tripeptides
DOE60_RS04595	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DOE60_RS04600	COG1690	Belongs to the RtcB family
DOE60_RS04610	COG3034	peptidoglycan biosynthetic process
DOE60_RS04615	COG0121	glutamine amidotransferase
DOE60_RS04630	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DOE60_RS04705	COG3209	COG3209 Rhs family protein
DOE60_RS04730	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DOE60_RS04765	COG3501	Rhs element vgr protein
DOE60_RS04850	COG4104	PAAR repeat-containing protein
DOE60_RS04900	COG2226	methyltransferase
DOE60_RS04910	COG0741	lytic transglycosylase activity
DOE60_RS04910	COG1388	LysM domain
DOE60_RS04915	COG2226	methyltransferase
DOE60_RS04925	COG0583	DNA-binding transcription factor activity
DOE60_RS04960	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DOE60_RS04985	COG1720	tRNA m6t6A37 methyltransferase activity
DOE60_RS04995	COG3015	lipoprotein NlpE involved in copper resistance
DOE60_RS05000	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DOE60_RS05015	COG4568	rho-dependent transcription termination
DOE60_RS05025	COG0346	lactoylglutathione lyase activity
DOE60_RS05030	COG1982	Orn Lys Arg decarboxylase major
DOE60_RS05090	COG0575	Belongs to the CDS family
DOE60_RS05150	COG0477	Major facilitator Superfamily
DOE60_RS05165	COG3835	regulator
DOE60_RS05190	COG2860	membrane
DOE60_RS05220	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DOE60_RS05225	COG1120	ATPase activity
DOE60_RS05230	COG4774	siderophore transport
DOE60_RS05235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DOE60_RS05240	COG1643	Atp-dependent helicase
DOE60_RS05245	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DOE60_RS05250	COG1489	DNA binding
DOE60_RS05260	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DOE60_RS05265	COG0617	tRNA 3'-terminal CCA addition
DOE60_RS05270	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DOE60_RS05280	COG3121	Chaperone
DOE60_RS05285	COG3188	usher protein
DOE60_RS05290	COG3539	Fimbrial protein
DOE60_RS05295	COG3539	Fimbrial protein
DOE60_RS05300	COG3539	Fimbrial protein
DOE60_RS05310	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DOE60_RS05315	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DOE60_RS05325	COG0726	polysaccharide deacetylase
DOE60_RS05330	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS05335	COG0842	Transport permease protein
DOE60_RS05340	COG1131	(ABC) transporter
DOE60_RS05345	COG0288	reversible hydration of carbon dioxide
DOE60_RS05355	COG4993	Dehydrogenase
DOE60_RS05360	COG2132	Multicopper oxidase
DOE60_RS05380	COG1349	DNA-binding transcription factor activity
DOE60_RS05415	COG3064	Membrane
DOE60_RS05430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DOE60_RS05435	COG0508	dehydrogenase complex catalyzes the overall conversion of
DOE60_RS05440	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DOE60_RS05490	COG2211	Major facilitator Superfamily
DOE60_RS05495	COG3940	Belongs to the glycosyl hydrolase 43 family
DOE60_RS05500	COG3725	Membrane protein required for beta-lactamase induction
DOE60_RS05520	COG4969	Belongs to the N-Me-Phe pilin family
DOE60_RS05525	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DOE60_RS05530	COG1459	type II secretion system
DOE60_RS05555	COG0583	DNA-binding transcription factor activity
DOE60_RS05560	COG0667	Aldo Keto reductase
DOE60_RS05565	COG0675	Transposase, IS605 OrfB family
DOE60_RS05575	COG0494	nUDIX hydrolase
DOE60_RS05595	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DOE60_RS05600	COG0849	cell division
DOE60_RS05625	COG0772	Belongs to the SEDS family
DOE60_RS05640	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DOE60_RS05650	COG0768	penicillin binding
DOE60_RS05660	COG3116	cell division
DOE60_RS05720	COG2814	Major facilitator Superfamily
DOE60_RS05750	COG0586	Pfam SNARE associated Golgi protein
DOE60_RS05770	COG0235	Class ii aldolase
DOE60_RS05865	COG2271	Major facilitator Superfamily
DOE60_RS05875	COG0644	oxidoreductase
DOE60_RS05920	COG3119	arylsulfatase activity
DOE60_RS05980	COG1047	Peptidyl-prolyl cis-trans
DOE60_RS05995	COG0196	riboflavin kinase activity
DOE60_RS06010	COG0583	DNA-binding transcription factor activity
DOE60_RS06030	COG0641	radical SAM
DOE60_RS06035	COG3119	arylsulfatase activity
DOE60_RS06045	COG0737	Belongs to the 5'-nucleotidase family
DOE60_RS06060	COG0583	DNA-binding transcription factor activity
DOE60_RS06080	COG3121	Chaperone
DOE60_RS06085	COG3539	Fimbrial protein
DOE60_RS06100	COG3188	usher protein
DOE60_RS06165	COG4735	regulation of single-species biofilm formation
DOE60_RS06170	COG1584	GPR1 FUN34 yaaH family protein
DOE60_RS06175	COG0521	Mo-molybdopterin cofactor biosynthetic process
DOE60_RS06185	COG1115	amino acid carrier protein
DOE60_RS06195	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DOE60_RS06205	COG0527	aspartate kinase activity
DOE60_RS06205	COG0460	homoserine dehydrogenase
DOE60_RS06215	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DOE60_RS06230	COG0745	RESPONSE REGULATOR receiver
DOE60_RS06250	COG3121	Chaperone
DOE60_RS06270	COG4452	Inner membrane protein CreD
DOE60_RS06275	COG4452	Inner membrane protein CreD
DOE60_RS06280	COG2205	protein histidine kinase activity
DOE60_RS06285	COG0745	RESPONSE REGULATOR receiver
DOE60_RS06290	COG3045	CreA protein
DOE60_RS06295	COG2207	Transcriptional regulator
DOE60_RS06295	COG3708	Transcriptional regulator
DOE60_RS06325	COG0488	(ABC) transporter
DOE60_RS06340	COG0560	Phosphoserine phosphatase
DOE60_RS06350	COG3726	membrane protein affecting hemolysin expression
DOE60_RS06360	COG3539	Fimbrial protein
DOE60_RS06370	COG3121	Chaperone
DOE60_RS06375	COG3188	usher protein
DOE60_RS06405	COG1328	CTP reductase activity
DOE60_RS06410	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOE60_RS06415	COG0084	hydrolase, TatD family'
DOE60_RS06420	COG4667	esterase of the alpha-beta hydrolase superfamily
DOE60_RS06430	COG2823	Periplasmic or secreted lipoprotein
DOE60_RS06440	COG1011	Hydrolase
DOE60_RS06450	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DOE60_RS06485	COG4114	ferric iron reductase
DOE60_RS06490	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DOE60_RS06495	COG2197	response regulator
DOE60_RS06500	COG2197	response regulator
DOE60_RS06505	COG2966	Psort location CytoplasmicMembrane, score
DOE60_RS06520	COG1484	DNA-dependent DNA replication
DOE60_RS06535	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DOE60_RS06540	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DOE60_RS06545	COG3716	PTS system mannose fructose sorbose family IID component
DOE60_RS06550	COG3715	PTS system
DOE60_RS06555	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS06570	COG0840	transmembrane signaling receptor activity
DOE60_RS06575	COG1966	Carbon starvation protein
DOE60_RS06580	COG2879	small protein
DOE60_RS06585	COG0523	cobalamin synthesis protein
DOE60_RS06590	COG1715	Restriction endonuclease
DOE60_RS06635	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS06640	COG5464	transposase or invertase
DOE60_RS06650	COG2733	membrane
DOE60_RS06655	COG0477	Major facilitator Superfamily
DOE60_RS06660	COG3366	ferrous iron transmembrane transporter activity
DOE60_RS06665	COG0700	Nucleoside recognition
DOE60_RS06670	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOE60_RS06675	COG0583	DNA-binding transcription factor activity
DOE60_RS06690	COG0180	Tryptophanyl-tRNA synthetase
DOE60_RS06695	COG2186	Transcriptional regulator
DOE60_RS06740	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DOE60_RS06780	COG4133	protoheme IX ABC transporter activity
DOE60_RS06815	COG2963	transposase activity
DOE60_RS06825	COG3547	Transposase (IS116 IS110 IS902 family)
DOE60_RS06845	COG1064	alcohol dehydrogenase
DOE60_RS06850	COG3265	gluconokinase activity
DOE60_RS06855	COG1063	alcohol dehydrogenase
DOE60_RS06860	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS06865	COG2610	gluconate transmembrane transporter activity
DOE60_RS06870	COG1609	Transcriptional regulator
DOE60_RS06875	COG0795	lipopolysaccharide-transporting ATPase activity
DOE60_RS06880	COG0795	lipopolysaccharide-transporting ATPase activity
DOE60_RS06900	COG2927	DNA polymerase III (CHI subunit)
DOE60_RS06950	COG2731	YhcH YjgK YiaL family protein
DOE60_RS06960	COG2235	arginine
DOE60_RS06975	COG1288	antiporter activity
DOE60_RS06980	COG1438	arginine binding
DOE60_RS07025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS07025	COG1263	PTS System
DOE60_RS07030	COG0366	Alpha amylase catalytic
DOE60_RS07040	COG0602	queuosine metabolic process
DOE60_RS07055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS07055	COG3711	transcriptional antiterminator
DOE60_RS07070	COG3964	amidohydrolase
DOE60_RS07105	COG0312	modulator of DNA gyrase
DOE60_RS07115	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DOE60_RS07125	COG1172	Belongs to the binding-protein-dependent transport system permease family
DOE60_RS07130	COG1172	Belongs to the binding-protein-dependent transport system permease family
DOE60_RS07135	COG1129	ABC transporter
DOE60_RS07140	COG1879	ABC-type sugar transport system periplasmic component
DOE60_RS07150	COG2105	PFAM AIG2 family protein
DOE60_RS07170	COG1253	flavin adenine dinucleotide binding
DOE60_RS07185	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DOE60_RS07200	COG1733	regulation of RNA biosynthetic process
DOE60_RS07205	COG0702	epimerase
DOE60_RS07210	COG0697	spore germination
DOE60_RS07220	COG1113	amino acid transport
DOE60_RS07225	COG0545	Peptidyl-prolyl cis-trans isomerase
DOE60_RS07235	COG3061	Opacity-associated protein A
DOE60_RS07250	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DOE60_RS07315	COG1073	alpha beta
DOE60_RS07320	COG3650	response to hydrogen peroxide
DOE60_RS07330	COG1960	acyl-CoA dehydrogenase activity
DOE60_RS07335	COG0754	glutathionylspermidine amidase activity
DOE60_RS07340	COG5463	Belongs to the UPF0441 family
DOE60_RS07345	COG3766	membrane
DOE60_RS07360	COG1842	Phage shock protein A
DOE60_RS07365	COG3789	protein conserved in bacteria
DOE60_RS07375	COG0557	exoribonuclease II activity
DOE60_RS07395	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DOE60_RS07400	COG0330	HflC and HflK could
DOE60_RS07405	COG0330	HflC and HflK could
DOE60_RS07410	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DOE60_RS07435	COG0802	atpase or kinase
DOE60_RS07440	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DOE60_RS07440	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DOE60_RS07465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS07485	COG3264	Mechanosensitive ion channel
DOE60_RS07485	COG1511	domain protein
DOE60_RS07500	COG1053	succinate dehydrogenase
DOE60_RS07505	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DOE60_RS07535	COG5510	response to toxic substance
DOE60_RS07645	COG0531	amino acid
DOE60_RS07650	COG3030	protein affecting phage T7 exclusion by the F plasmid
DOE60_RS07655	COG1027	Aspartate ammonia-lyase
DOE60_RS07660	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DOE60_RS07675	COG1309	transcriptional regulator
DOE60_RS07685	COG0582	viral genome integration into host DNA
DOE60_RS07690	COG0640	Transcriptional regulator
DOE60_RS07775	COG2197	response regulator
DOE60_RS07800	COG3381	protein complex oligomerization
DOE60_RS07805	COG3302	dmso reductase anchor subunit
DOE60_RS07810	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS07815	COG0243	molybdopterin cofactor binding
DOE60_RS07820	COG3290	protein histidine kinase activity
DOE60_RS07825	COG4565	transcriptional regulatory protein
DOE60_RS07835	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DOE60_RS07840	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DOE60_RS07840	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DOE60_RS07850	COG2169	Transcriptional regulator
DOE60_RS07855	COG1982	Orn Lys Arg decarboxylase major
DOE60_RS07860	COG2207	Transcriptional regulator
DOE60_RS07865	COG0531	amino acid
DOE60_RS07895	COG2824	Alkylphosphonate utilization operon protein PhnA
DOE60_RS07900	COG2764	glyoxalase bleomycin resistance protein dioxygenase
DOE60_RS07910	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DOE60_RS07915	COG3639	organic phosphonate transmembrane transporter activity
DOE60_RS07920	COG3624	Phosphonate C-P lyase system protein PhnG
DOE60_RS07925	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DOE60_RS07930	COG3626	phosphonate metabolism
DOE60_RS07935	COG3627	carbon phosphorus lyase activity
DOE60_RS07940	COG4107	phosphonate C-P lyase system protein PhnK
DOE60_RS07945	COG4778	phosphonate C-P lyase system protein PhnL
DOE60_RS07950	COG3454	Phosphonate metabolism
DOE60_RS07960	COG0456	acetyltransferase
DOE60_RS07965	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DOE60_RS07970	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DOE60_RS07980	COG1566	PFAM secretion protein HlyD family protein
DOE60_RS07985	COG1289	transmembrane transporter activity
DOE60_RS08000	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DOE60_RS08005	COG1301	dicarboxylic acid transport
DOE60_RS08010	COG4235	cytochrome complex assembly
DOE60_RS08020	COG3301	Polysulphide reductase, NrfD
DOE60_RS08025	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS08030	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
DOE60_RS08045	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DOE60_RS08065	COG1346	cytolysis
DOE60_RS08070	COG1380	Effector of murein hydrolase LrgA
DOE60_RS08075	COG0583	DNA-binding transcription factor activity
DOE60_RS08080	COG0025	NhaP-type Na H and K H
DOE60_RS08090	COG2252	PERMEase
DOE60_RS08115	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DOE60_RS08180	COG2315	Protein conserved in bacteria
DOE60_RS08190	COG3700	Belongs to the class B bacterial acid phosphatase family
DOE60_RS08230	COG0735	belongs to the Fur family
DOE60_RS08245	COG0534	Mate efflux family protein
DOE60_RS08255	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DOE60_RS08300	COG3833	ABC-type maltose transport systems, permease component
DOE60_RS08305	COG2814	Major facilitator Superfamily
DOE60_RS08305	COG0477	Major facilitator Superfamily
DOE60_RS08315	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DOE60_RS08340	COG0527	aspartate kinase activity
DOE60_RS08355	COG0741	lytic transglycosylase activity
DOE60_RS08435	COG5301	cellulose 1,4-beta-cellobiosidase activity
DOE60_RS08440	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DOE60_RS08465	COG1349	DNA-binding transcription factor activity
DOE60_RS08480	COG3122	Protein conserved in bacteria
DOE60_RS08530	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DOE60_RS08570	COG0151	Belongs to the GarS family
DOE60_RS08575	COG2204	response regulator
DOE60_RS08635	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DOE60_RS08640	COG2104	thiamine diphosphate biosynthetic process
DOE60_RS08700	COG0250	Participates in transcription elongation, termination and antitermination
DOE60_RS08820	COG0583	DNA-binding transcription factor activity
DOE60_RS08860	COG2207	Transcriptional regulator
DOE60_RS08870	COG0371	Dehydrogenase
DOE60_RS08875	COG3738	Protein conserved in bacteria
DOE60_RS08890	COG0737	Belongs to the 5'-nucleotidase family
DOE60_RS08905	COG0460	homoserine dehydrogenase
DOE60_RS08905	COG0527	aspartate kinase activity
DOE60_RS08910	COG0626	cystathionine gamma-synthase activity
DOE60_RS08920	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
DOE60_RS08945	COG3209	COG3209 Rhs family protein
DOE60_RS08960	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DOE60_RS08965	COG1609	Transcriptional regulator
DOE60_RS08970	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DOE60_RS08985	COG1575	Belongs to the MenA family. Type 1 subfamily
DOE60_RS08995	COG3074	FtsZ-dependent cytokinesis
DOE60_RS09000	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DOE60_RS09010	COG1494	fructose-1,6-bisphosphatase
DOE60_RS09020	COG3152	Membrane
DOE60_RS09035	COG0471	metal ion transport
DOE60_RS09065	COG3678	ATP-independent chaperone mediated protein folding
DOE60_RS09070	COG0745	RESPONSE REGULATOR receiver
DOE60_RS09075	COG2205	protein histidine kinase activity
DOE60_RS09080	COG2258	MOSC domain
DOE60_RS09095	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
DOE60_RS09145	COG1454	alcohol dehydrogenase
DOE60_RS09160	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DOE60_RS09190	COG3188	usher protein
DOE60_RS09195	COG3121	Chaperone
DOE60_RS09205	COG3383	formate dehydrogenase (NAD+) activity
DOE60_RS09205	COG0243	molybdopterin cofactor binding
DOE60_RS09210	COG3383	formate dehydrogenase (NAD+) activity
DOE60_RS09210	COG0243	molybdopterin cofactor binding
DOE60_RS09215	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS09220	COG2864	formate dehydrogenase
DOE60_RS09235	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
DOE60_RS09245	COG0456	acetyltransferase
DOE60_RS09260	COG1011	Hydrolase
DOE60_RS09265	COG1349	DNA-binding transcription factor activity
DOE60_RS09270	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS09280	COG3684	Belongs to the aldolase LacD family
DOE60_RS09290	COG2017	converts alpha-aldose to the beta-anomer
DOE60_RS09295	COG1501	Belongs to the glycosyl hydrolase 31 family
DOE60_RS09340	COG0561	phosphatase activity
DOE60_RS09405	COG0204	Acyl-transferase
DOE60_RS09420	COG3084	Protein conserved in bacteria
DOE60_RS09425	COG0746	molybdenum cofactor guanylyltransferase activity
DOE60_RS09430	COG1763	Mo-molybdopterin cofactor biosynthetic process
DOE60_RS09470	COG1739	Uncharacterized protein family UPF0029
DOE60_RS09500	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DOE60_RS09515	COG0805	protein transport
DOE60_RS09560	COG0641	radical SAM
DOE60_RS09585	COG0561	phosphatase activity
DOE60_RS09590	COG2267	carboxylic ester hydrolase activity
DOE60_RS09595	COG1280	lysine exporter protein (LysE YggA)
DOE60_RS09650	COG1011	Hydrolase
DOE60_RS09705	COG2959	enzyme of heme biosynthesis
DOE60_RS09710	COG3071	HemY protein
DOE60_RS09755	COG2244	polysaccharide biosynthetic process
DOE60_RS09760	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DOE60_RS09765	COG0456	acetyltransferase
DOE60_RS09770	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DOE60_RS09775	COG1088	dTDP-glucose 4,6-dehydratase activity
DOE60_RS09780	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DOE60_RS09795	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DOE60_RS09815	COG3118	belongs to the thioredoxin family
DOE60_RS09890	COG3978	acetolactate synthase activity
DOE60_RS09950	COG2186	Transcriptional regulator
DOE60_RS09955	COG0477	Major facilitator Superfamily
DOE60_RS09960	COG1609	Transcriptional regulator
DOE60_RS09965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS09975	COG1172	Belongs to the binding-protein-dependent transport system permease family
DOE60_RS10015	COG1522	sequence-specific DNA binding
DOE60_RS10020	COG0716	FMN binding
DOE60_RS10040	COG3312	ion transport
DOE60_RS10105	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DOE60_RS10110	COG0573	inorganic phosphate transmembrane transporter activity
DOE60_RS10115	COG0581	inorganic phosphate transmembrane transporter activity
DOE60_RS10125	COG0704	Plays a role in the regulation of phosphate uptake
DOE60_RS10130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DOE60_RS10135	COG2252	PERMEase
DOE60_RS10140	COG0431	NADPH-dependent FMN reductase
DOE60_RS10145	COG2091	lysine biosynthetic process via aminoadipic acid
DOE60_RS10195	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DOE60_RS10205	COG0561	phosphatase activity
DOE60_RS10210	COG2198	Histidine kinase
DOE60_RS10210	COG0784	Response regulator, receiver
DOE60_RS10210	COG2205	protein histidine kinase activity
DOE60_RS10215	COG1879	ABC-type sugar transport system periplasmic component
DOE60_RS10220	COG0745	RESPONSE REGULATOR receiver
DOE60_RS10225	COG3005	denitrification pathway
DOE60_RS10240	COG1858	cytochrome C peroxidase
DOE60_RS10250	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DOE60_RS10255	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DOE60_RS10260	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DOE60_RS10280	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DOE60_RS10285	COG3088	subunit of a heme lyase
DOE60_RS10285	COG4235	cytochrome complex assembly
DOE60_RS10295	COG0823	Involved in the tonB-independent uptake of proteins
DOE60_RS10300	COG5645	(Lipo)protein
DOE60_RS10315	COG0071	Belongs to the small heat shock protein (HSP20) family
DOE60_RS10325	COG2149	membrane
DOE60_RS10335	COG0641	radical SAM
DOE60_RS10345	COG2610	gluconate transmembrane transporter activity
DOE60_RS10350	COG0583	DNA-binding transcription factor activity
DOE60_RS10360	COG2814	Major facilitator Superfamily
DOE60_RS10395	COG0028	Belongs to the TPP enzyme family
DOE60_RS10400	COG0440	acetolactate synthase activity
DOE60_RS10405	COG1349	DNA-binding transcription factor activity
DOE60_RS10485	COG2723	6-phospho-beta-galactosidase activity
DOE60_RS10505	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS10505	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS10510	COG3715	PTS system
DOE60_RS10515	COG3716	PTS system mannose fructose sorbose family IID component
DOE60_RS10530	COG5464	transposase or invertase
DOE60_RS10540	COG1285	pathogenesis
DOE60_RS10560	COG1335	isochorismatase
DOE60_RS10570	COG3710	Transcriptional regulator
DOE60_RS10585	COG2771	luxR family
DOE60_RS10625	COG2211	Major facilitator Superfamily
DOE60_RS10630	COG1501	Belongs to the glycosyl hydrolase 31 family
DOE60_RS10635	COG2982	Protein involved in outer membrane biogenesis
DOE60_RS10640	COG2233	PERMEase
DOE60_RS10645	COG0786	glutamate:sodium symporter activity
DOE60_RS10650	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DOE60_RS10655	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOE60_RS10660	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DOE60_RS10680	COG2860	membrane
DOE60_RS10690	COG0583	DNA-binding transcription factor activity
DOE60_RS10695	COG1561	YicC-like family, N-terminal region
DOE60_RS10725	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DOE60_RS10755	COG1519	Transferase
DOE60_RS10760	COG0859	PFAM glycosyl transferase family 9
DOE60_RS10765	COG0438	transferase activity, transferring glycosyl groups
DOE60_RS10845	COG2861	carbohydrate metabolic process
DOE60_RS10850	COG4942	peptidase
DOE60_RS10860	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DOE60_RS10865	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DOE60_RS10885	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DOE60_RS10895	COG2186	Transcriptional regulator
DOE60_RS10915	COG3722	fumarate hydratase activity
DOE60_RS10925	COG2213	PTS system mannitol-specific
DOE60_RS10925	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS10930	COG0625	glutathione transferase activity
DOE60_RS10940	COG3276	selenocysteine insertion sequence binding
DOE60_RS10945	COG1454	alcohol dehydrogenase
DOE60_RS10950	COG1940	carbohydrate kinase activity
DOE60_RS10955	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS10960	COG0235	Class ii aldolase
DOE60_RS10965	COG3623	hexulose-6-phosphate isomerase
DOE60_RS10970	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DOE60_RS10975	COG1070	Carbohydrate kinase
DOE60_RS10980	COG2271	Major facilitator Superfamily
DOE60_RS10990	COG2731	YhcH YjgK YiaL family protein
DOE60_RS11000	COG1414	Transcriptional regulator
DOE60_RS11005	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS11010	COG3977	Valine--pyruvate aminotransferase
DOE60_RS11015	COG0366	Alpha amylase catalytic
DOE60_RS11020	COG2992	FlgJ-related protein
DOE60_RS11025	COG2207	Transcriptional regulator
DOE60_RS11025	COG1609	Transcriptional regulator
DOE60_RS11040	COG1070	Carbohydrate kinase
DOE60_RS11045	COG4682	membrane
DOE60_RS11050	COG4682	membrane
DOE60_RS11055	COG3274	enterobacterial common antigen metabolic process
DOE60_RS11090	COG1278	Cold shock
DOE60_RS11095	COG2944	sequence-specific DNA binding
DOE60_RS11110	COG2885	chlorophyll binding
DOE60_RS11115	COG0243	molybdopterin cofactor binding
DOE60_RS11120	COG0456	acetyltransferase
DOE60_RS11125	COG2818	Glycosylase
DOE60_RS11130	COG5571	outer membrane autotransporter
DOE60_RS11160	COG0747	negative chemotaxis
DOE60_RS11165	COG0601	transmembrane transport
DOE60_RS11170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOE60_RS11175	COG0444	Belongs to the ABC transporter superfamily
DOE60_RS11180	COG4608	Belongs to the ABC transporter superfamily
DOE60_RS11185	COG0814	amino acid
DOE60_RS11230	COG1215	transferase activity, transferring glycosyl groups
DOE60_RS11235	COG1215	transferase activity, transferring glycosyl groups
DOE60_RS11255	COG2200	EAL domain
DOE60_RS11255	COG2199	diguanylate cyclase activity
DOE60_RS11270	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS11275	COG2200	EAL domain
DOE60_RS11280	COG2982	Protein involved in outer membrane biogenesis
DOE60_RS11285	COG0477	Major facilitator Superfamily
DOE60_RS11295	COG1295	ribonuclease BN
DOE60_RS11300	COG0583	DNA-binding transcription factor activity
DOE60_RS11305	COG2197	response regulator
DOE60_RS11325	COG2188	Transcriptional regulator
DOE60_RS11330	COG2222	sugar isomerase
DOE60_RS11335	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS11340	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DOE60_RS11350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DOE60_RS11355	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DOE60_RS11360	COG0671	phosphoesterase, PA-phosphatase related
DOE60_RS11380	COG1959	2 iron, 2 sulfur cluster binding
DOE60_RS11400	COG0306	phosphate transporter
DOE60_RS11405	COG2081	HI0933 family
DOE60_RS11410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS11415	COG0842	Transport permease protein
DOE60_RS11415	COG1129	ABC transporter
DOE60_RS11420	COG0842	Transport permease protein
DOE60_RS11430	COG2091	lysine biosynthetic process via aminoadipic acid
DOE60_RS11435	COG0628	permease
DOE60_RS11450	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DOE60_RS11470	COG3714	YhhN family
DOE60_RS11480	COG3776	membrane
DOE60_RS11485	COG0742	ribosomal rna small subunit methyltransferase
DOE60_RS11490	COG0552	protein localization to endoplasmic reticulum
DOE60_RS11495	COG2884	Cell division ATP-binding protein ftsE
DOE60_RS11500	COG2177	Part of the ABC transporter FtsEX involved in
DOE60_RS11520	COG1704	LemA family
DOE60_RS11580	COG0584	glycerophosphoryl diester phosphodiesterase
DOE60_RS11590	COG0405	Gamma-glutamyltransferase
DOE60_RS11605	COG3157	Type VI secretion system effector, Hcp
DOE60_RS11610	COG0673	inositol 2-dehydrogenase activity
DOE60_RS11615	COG1741	Belongs to the pirin family
DOE60_RS11620	COG1609	Transcriptional regulator
DOE60_RS11625	COG3265	gluconokinase activity
DOE60_RS11630	COG2610	gluconate transmembrane transporter activity
DOE60_RS11645	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DOE60_RS11665	COG0058	SHG alpha-glucan phosphorylase activity
DOE60_RS11670	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DOE60_RS11685	COG1349	DNA-binding transcription factor activity
DOE60_RS11690	COG4650	regulator
DOE60_RS11695	COG1690	Belongs to the RtcB family
DOE60_RS11710	COG4104	PAAR repeat-containing protein
DOE60_RS11720	COG0058	SHG alpha-glucan phosphorylase activity
DOE60_RS11725	COG1640	4-alpha-glucanotransferase
DOE60_RS11730	COG2610	gluconate transmembrane transporter activity
DOE60_RS11750	COG5464	transposase or invertase
DOE60_RS11765	COG1918	ferrous iron import across plasma membrane
DOE60_RS11775	COG2183	response to ionizing radiation
DOE60_RS11780	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DOE60_RS11800	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DOE60_RS11810	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DOE60_RS11815	COG1011	Hydrolase
DOE60_RS11825	COG0494	nUDIX hydrolase
DOE60_RS11830	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DOE60_RS11835	COG4972	Pilus assembly protein
DOE60_RS11840	COG3166	PFAM Fimbrial assembly family protein
DOE60_RS11855	COG4796	Type ii and iii secretion system protein
DOE60_RS11875	COG3266	domain, Protein
DOE60_RS11880	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DOE60_RS11885	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DOE60_RS11925	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DOE60_RS11960	COG1289	transmembrane transporter activity
DOE60_RS11970	COG1765	OsmC-like protein
DOE60_RS11975	COG3954	Phosphoribulokinase
DOE60_RS11985	COG0429	hydrolase of the alpha beta-hydrolase fold
DOE60_RS12020	COG0679	Auxin Efflux Carrier
DOE60_RS12030	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DOE60_RS12040	COG0488	(ABC) transporter
DOE60_RS12055	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DOE60_RS12060	COG1047	Peptidyl-prolyl cis-trans
DOE60_RS12075	COG0545	Peptidyl-prolyl cis-trans isomerase
DOE60_RS12080	COG2964	Protein conserved in bacteria
DOE60_RS12150	COG0051	transcription antitermination factor activity, RNA binding
DOE60_RS12175	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DOE60_RS12255	COG0201	protein transport
DOE60_RS12285	COG0203	ribosomal protein L17
DOE60_RS12295	COG0789	Transcriptional regulator
DOE60_RS12300	COG3036	rescue of stalled ribosome
DOE60_RS12330	COG0758	DNA mediated transformation
DOE60_RS12340	COG0551	DNA topoisomerase type I activity
DOE60_RS12360	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DOE60_RS12400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DOE60_RS12405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS12410	COG1309	transcriptional regulator
DOE60_RS12425	COG2189	Belongs to the N(4) N(6)-methyltransferase family
DOE60_RS12450	COG4145	pantothenate transmembrane transporter activity
DOE60_RS12455	COG3924	membrane
DOE60_RS12460	COG0439	Biotin carboxylase
DOE60_RS12465	COG0511	ligase activity, forming carbon-carbon bonds
DOE60_RS12480	COG0604	alcohol dehydrogenase
DOE60_RS12485	COG2199	diguanylate cyclase activity
DOE60_RS12485	COG2200	EAL domain
DOE60_RS12500	COG1077	Cell shape determining protein MreB Mrl
DOE60_RS12505	COG1792	Involved in formation and maintenance of cell shape
DOE60_RS12510	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DOE60_RS12525	COG3164	Protein of unknown function
DOE60_RS12530	COG0312	modulator of DNA gyrase
DOE60_RS12555	COG2732	(Barnase) inhibitor
DOE60_RS12585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DOE60_RS12590	COG3105	Protein conserved in bacteria
DOE60_RS12595	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DOE60_RS12615	COG0625	glutathione transferase activity
DOE60_RS12620	COG2969	positive regulation of protein catabolic process
DOE60_RS12650	COG2731	YhcH YjgK YiaL family protein
DOE60_RS12660	COG3188	usher protein
DOE60_RS12665	COG3121	Chaperone
DOE60_RS12670	COG3539	Fimbrial protein
DOE60_RS12675	COG3539	Fimbrial protein
DOE60_RS12680	COG3539	Fimbrial protein
DOE60_RS12690	COG0402	S-adenosylhomocysteine deaminase activity
DOE60_RS12695	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DOE60_RS12700	COG4804	nuclease activity
DOE60_RS12705	COG0493	'glutamate synthase
DOE60_RS12710	COG0067	glutamate synthase
DOE60_RS12710	COG0069	glutamate synthase activity
DOE60_RS12710	COG0070	glutamate synthase
DOE60_RS12725	COG1242	4 iron, 4 sulfur cluster binding
DOE60_RS12730	COG5002	protein histidine kinase activity
DOE60_RS12730	COG2198	Histidine kinase
DOE60_RS12730	COG0784	Response regulator, receiver
DOE60_RS12735	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DOE60_RS12745	COG0515	serine threonine protein kinase
DOE60_RS12750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS12775	COG1137	ATPase activity
DOE60_RS12780	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DOE60_RS12785	COG3117	lipopolysaccharide transmembrane transporter activity
DOE60_RS12790	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DOE60_RS12800	COG0530	calcium, potassium:sodium antiporter activity
DOE60_RS12805	COG1127	ABC transporter
DOE60_RS12810	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DOE60_RS12815	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DOE60_RS12820	COG2854	intermembrane phospholipid transfer
DOE60_RS12825	COG3113	response to antibiotic
DOE60_RS12830	COG5007	Belongs to the BolA IbaG family
DOE60_RS12840	COG3423	Transcriptional regulator
DOE60_RS12845	COG0142	geranyltranstransferase activity
DOE60_RS12860	COG0697	spore germination
DOE60_RS12865	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DOE60_RS12870	COG2027	D-alanyl-D-alanine carboxypeptidase
DOE60_RS12880	COG1534	Rna-binding protein
DOE60_RS12900	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DOE60_RS12910	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DOE60_RS12970	COG0513	Belongs to the DEAD box helicase family
DOE60_RS12975	COG0814	amino acid
DOE60_RS12980	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DOE60_RS12985	COG0826	peptidase U32
DOE60_RS12990	COG0826	peptidase U32
DOE60_RS12995	COG3154	lipid carrier protein
DOE60_RS13000	COG3153	acetyltransferase
DOE60_RS13015	COG0693	protein deglycase activity
DOE60_RS13020	COG0702	epimerase
DOE60_RS13025	COG2823	Periplasmic or secreted lipoprotein
DOE60_RS13045	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DOE60_RS13060	COG1704	LemA family
DOE60_RS13075	COG1063	alcohol dehydrogenase
DOE60_RS13080	COG3775	system Galactitol-specific IIC component
DOE60_RS13085	COG3414	Phosphotransferase system galactitol-specific IIB component
DOE60_RS13090	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS13105	COG2721	sulfolactate sulfo-lyase activity
DOE60_RS13115	COG2084	Dehydrogenase
DOE60_RS13120	COG1929	Belongs to the glycerate kinase type-1 family
DOE60_RS13150	COG0583	DNA-binding transcription factor activity
DOE60_RS13170	COG1882	Formate acetyltransferase
DOE60_RS13175	COG1760	l-serine dehydratase
DOE60_RS13180	COG0814	amino acid
DOE60_RS13195	COG1741	Belongs to the pirin family
DOE60_RS13200	COG0583	DNA-binding transcription factor activity
DOE60_RS13205	COG3152	Membrane
DOE60_RS13210	COG0435	Glutathione S-transferase
DOE60_RS13215	COG2259	Doxx family
DOE60_RS13225	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DOE60_RS13230	COG4575	ribosome binding
DOE60_RS13235	COG1422	Protein of unknown function (DUF1090)
DOE60_RS13245	COG0586	Pfam SNARE associated Golgi protein
DOE60_RS13250	COG2186	Transcriptional regulator
DOE60_RS13255	COG2271	Major facilitator Superfamily
DOE60_RS13265	COG2721	sulfolactate sulfo-lyase activity
DOE60_RS13280	COG0673	inositol 2-dehydrogenase activity
DOE60_RS13285	COG2949	membrane
DOE60_RS13290	COG1451	nucleotide metabolic process
DOE60_RS13300	COG0446	pyridine nucleotide-disulphide oxidoreductase
DOE60_RS13300	COG1902	pentaerythritol trinitrate reductase activity
DOE60_RS13305	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
DOE60_RS13305	COG3408	Glycogen debranching enzyme
DOE60_RS13315	COG0531	amino acid
DOE60_RS13320	COG3250	beta-galactosidase activity
DOE60_RS13325	COG2731	YhcH YjgK YiaL family protein
DOE60_RS13330	COG1609	Transcriptional regulator
DOE60_RS13335	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DOE60_RS13350	COG0840	transmembrane signaling receptor activity
DOE60_RS13355	COG0840	transmembrane signaling receptor activity
DOE60_RS13360	COG1695	Transcriptional regulator
DOE60_RS13365	COG2375	cellular response to nickel ion
DOE60_RS13370	COG4974	Belongs to the 'phage' integrase family
DOE60_RS13440	COG4695	Portal protein
DOE60_RS13535	COG5301	cellulose 1,4-beta-cellobiosidase activity
DOE60_RS13585	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DOE60_RS13610	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DOE60_RS13615	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DOE60_RS13630	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DOE60_RS13645	COG4991	sh3 domain protein
DOE60_RS13655	COG3025	triphosphatase activity
DOE60_RS13675	COG2268	Band 7 protein
DOE60_RS13680	COG1585	Membrane protein implicated in regulation of membrane protease activity
DOE60_RS13700	COG3539	Fimbrial protein
DOE60_RS13705	COG3121	Chaperone
DOE60_RS13710	COG3188	usher protein
DOE60_RS13715	COG3539	Fimbrial protein
DOE60_RS13745	COG3384	dioxygenase
DOE60_RS13750	COG0754	glutathionylspermidine amidase activity
DOE60_RS13770	COG0494	nUDIX hydrolase
DOE60_RS13775	COG3151	Protein conserved in bacteria
DOE60_RS13780	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DOE60_RS13785	COG3150	esterase
DOE60_RS13795	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DOE60_RS13800	COG2249	NAD(P)H dehydrogenase (quinone) activity
DOE60_RS13805	COG0642	Histidine kinase
DOE60_RS13815	COG3111	PFAM Bacterial OB fold (BOF) protein
DOE60_RS13845	COG0471	metal ion transport
DOE60_RS13855	COG1979	alcohol dehydrogenase
DOE60_RS13860	COG2207	Transcriptional regulator
DOE60_RS13885	COG0848	biopolymer transport protein
DOE60_RS13890	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS13915	COG0840	transmembrane signaling receptor activity
DOE60_RS13930	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
DOE60_RS13935	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS13940	COG5557	Pfam Polysulphide reductase, NrfD
DOE60_RS13945	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
DOE60_RS13950	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DOE60_RS13955	COG1773	rubredoxin
DOE60_RS13965	COG0298	carbon dioxide binding
DOE60_RS13970	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DOE60_RS13980	COG0625	glutathione transferase activity
DOE60_RS13985	COG0754	glutathionylspermidine amidase activity
DOE60_RS14000	COG0246	Mannitol dehydrogenase
DOE60_RS14015	COG2271	Major facilitator Superfamily
DOE60_RS14040	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS14045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DOE60_RS14055	COG0531	amino acid
DOE60_RS14205	COG2916	Histone family protein nucleoid-structuring protein H-NS
DOE60_RS14325	COG3501	Rhs element vgr protein
DOE60_RS14345	COG3423	Transcriptional regulator
DOE60_RS14365	COG0582	viral genome integration into host DNA
DOE60_RS14375	COG1811	Na channel or pump
DOE60_RS14385	COG1982	Orn Lys Arg decarboxylase major
DOE60_RS14390	COG2211	Major facilitator Superfamily
DOE60_RS14420	COG3171	Protein conserved in bacteria
DOE60_RS14430	COG0252	asparaginase activity
DOE60_RS14440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DOE60_RS14455	COG0762	integral membrane protein
DOE60_RS14460	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DOE60_RS14465	COG2805	Type II/IV secretion system protein
DOE60_RS14490	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DOE60_RS14495	COG2356	endonuclease I
DOE60_RS14505	COG2814	Major facilitator Superfamily
DOE60_RS14530	COG1166	arginine decarboxylase activity
DOE60_RS14540	COG2186	Transcriptional regulator
DOE60_RS14545	COG4948	Mandelate Racemase Muconate Lactonizing
DOE60_RS14550	COG0246	Mannitol dehydrogenase
DOE60_RS14555	COG1063	alcohol dehydrogenase
DOE60_RS14560	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
DOE60_RS14565	COG2731	YhcH YjgK YiaL family protein
DOE60_RS14570	COG2271	Major facilitator Superfamily
DOE60_RS14575	COG2267	carboxylic ester hydrolase activity
DOE60_RS14585	COG0501	Belongs to the peptidase M48B family
DOE60_RS14590	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DOE60_RS14595	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS14600	COG2213	PTS system mannitol-specific
DOE60_RS14605	COG1063	alcohol dehydrogenase
DOE60_RS14610	COG1494	fructose-1,6-bisphosphatase
DOE60_RS14625	COG1072	(Pantothenic acid kinase))
DOE60_RS14630	COG1122	ATPase activity
DOE60_RS14635	COG1122	ATPase activity
DOE60_RS14670	COG0191	fructose-bisphosphate aldolase activity
DOE60_RS14675	COG0668	transmembrane transport
DOE60_RS14685	COG2968	Membrane
DOE60_RS14690	COG0583	DNA-binding transcription factor activity
DOE60_RS14695	COG0427	acetyl-CoA hydrolase
DOE60_RS14700	COG1024	Enoyl-CoA hydratase
DOE60_RS14705	COG1703	isobutyryl-CoA mutase activity
DOE60_RS14710	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DOE60_RS14710	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DOE60_RS14730	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DOE60_RS14735	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DOE60_RS14760	COG0006	proline dipeptidase activity
DOE60_RS14765	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DOE60_RS14770	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DOE60_RS14790	COG2723	6-phospho-beta-galactosidase activity
DOE60_RS14800	COG1272	protein, Hemolysin III
DOE60_RS14860	COG4942	peptidase
DOE60_RS14880	COG0814	amino acid
DOE60_RS14895	COG0183	Belongs to the thiolase family
DOE60_RS14910	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS14915	COG2814	Major facilitator Superfamily
DOE60_RS14920	COG1794	racemase activity, acting on amino acids and derivatives
DOE60_RS14925	COG0583	DNA-binding transcription factor activity
DOE60_RS14935	COG1609	Transcriptional regulator
DOE60_RS14960	COG0477	Major facilitator Superfamily
DOE60_RS14965	COG0667	Aldo Keto reductase
DOE60_RS14975	COG0861	Integral membrane protein TerC family
DOE60_RS15015	COG2165	general secretion pathway protein
DOE60_RS15020	COG4795	General secretion pathway protein
DOE60_RS15030	COG4967	type IV pilus modification protein PilV
DOE60_RS15035	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DOE60_RS15045	COG1074	ATP-dependent DNA helicase activity
DOE60_RS15050	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DOE60_RS15060	COG0860	N-Acetylmuramoyl-L-alanine amidase
DOE60_RS15075	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DOE60_RS15080	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DOE60_RS15085	COG2962	Rard protein
DOE60_RS15090	COG2166	iron-sulfur cluster assembly
DOE60_RS15095	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DOE60_RS15105	COG0583	DNA-binding transcription factor activity
DOE60_RS15110	COG2363	Small membrane protein
DOE60_RS15120	COG1349	DNA-binding transcription factor activity
DOE60_RS15140	COG0738	Major facilitator superfamily
DOE60_RS15145	COG0235	Class ii aldolase
DOE60_RS15150	COG1454	alcohol dehydrogenase
DOE60_RS15165	COG1760	l-serine dehydratase
DOE60_RS15170	COG0814	amino acid
DOE60_RS15175	COG1611	Belongs to the LOG family
DOE60_RS15195	COG3098	single-species biofilm formation
DOE60_RS15205	COG0716	FMN binding
DOE60_RS15215	COG2271	Major facilitator Superfamily
DOE60_RS15220	COG4948	Mandelate Racemase Muconate Lactonizing
DOE60_RS15225	COG4948	Mandelate Racemase Muconate Lactonizing
DOE60_RS15230	COG1929	Belongs to the glycerate kinase type-1 family
DOE60_RS15235	COG2205	protein histidine kinase activity
DOE60_RS15235	COG3437	response regulator, receiver
DOE60_RS15235	COG3850	Histidine kinase
DOE60_RS15235	COG4999	Histidine kinase
DOE60_RS15245	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DOE60_RS15250	COG3956	TIGRFAM MazG family protein
DOE60_RS15265	COG0602	queuosine metabolic process
DOE60_RS15270	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DOE60_RS15270	COG0321	lipoyl(octanoyl) transferase activity
DOE60_RS15275	COG0720	synthase
DOE60_RS15290	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DOE60_RS15310	COG1203	CRISPR-associated helicase, Cas3
DOE60_RS15325	COG1857	crispr-associated protein
DOE60_RS15340	COG1518	maintenance of DNA repeat elements
DOE60_RS15345	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DOE60_RS15350	COG2234	aminopeptidase activity
DOE60_RS15420	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DOE60_RS15425	COG0163	prenyltransferase activity
DOE60_RS15435	COG1349	DNA-binding transcription factor activity
DOE60_RS15440	COG2084	Dehydrogenase
DOE60_RS15450	COG0235	Class ii aldolase
DOE60_RS15455	COG3622	Belongs to the hyi family
DOE60_RS15460	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DOE60_RS15465	COG2610	gluconate transmembrane transporter activity
DOE60_RS15480	COG2207	Transcriptional regulator
DOE60_RS15570	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DOE60_RS15590	COG0741	lytic transglycosylase activity
DOE60_RS15655	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DOE60_RS15660	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DOE60_RS15665	COG1121	(ABC) transporter
DOE60_RS15685	COG0309	Hydrogenase expression formation protein (HypE)
DOE60_RS15690	COG0409	Hydrogenase expression formation protein
DOE60_RS15695	COG0298	carbon dioxide binding
DOE60_RS15700	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DOE60_RS15720	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS15725	COG0651	ATP synthesis coupled electron transport
DOE60_RS15730	COG0650	Formate hydrogenlyase subunit 4
DOE60_RS15735	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DOE60_RS15735	COG3261	NADH dehydrogenase
DOE60_RS15740	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DOE60_RS15745	COG3260	NADH ubiquinone oxidoreductase 20
DOE60_RS15755	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DOE60_RS15765	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS15770	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DOE60_RS15790	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DOE60_RS15790	COG0517	IMP dehydrogenase activity
DOE60_RS15795	COG1349	DNA-binding transcription factor activity
DOE60_RS15800	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS15805	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS15815	COG3732	PTS system glucitol sorbitol-specific
DOE60_RS15820	COG3730	PTS system glucitol sorbitol-specific
DOE60_RS15825	COG2951	lytic endotransglycosylase activity
DOE60_RS15835	COG1546	Belongs to the CinA family
DOE60_RS15860	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DOE60_RS15890	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DOE60_RS15895	COG1238	metal cluster binding
DOE60_RS15925	COG2814	Major facilitator Superfamily
DOE60_RS15930	COG1566	PFAM secretion protein HlyD family protein
DOE60_RS15935	COG1846	Transcriptional regulator
DOE60_RS15940	COG2814	Major facilitator Superfamily
DOE60_RS15990	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DOE60_RS16000	COG4575	ribosome binding
DOE60_RS16030	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DOE60_RS16035	COG0640	Transcriptional regulator
DOE60_RS16040	COG0401	homolog of Blt101
DOE60_RS16050	COG1652	LysM domain
DOE60_RS16055	COG1802	Transcriptional regulator
DOE60_RS16060	COG1113	amino acid transport
DOE60_RS16065	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DOE60_RS16070	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS16075	COG0579	oxidoreductase
DOE60_RS16110	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DOE60_RS16130	COG2990	Protein conserved in bacteria
DOE60_RS16155	COG2819	hydrolase of the alpha beta superfamily
DOE60_RS16200	COG0251	oxidation-reduction process
DOE60_RS16245	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DOE60_RS16270	COG2867	negative regulation of translational initiation
DOE60_RS16285	COG0497	DNA recombination
DOE60_RS16305	COG4536	flavin adenine dinucleotide binding
DOE60_RS16310	COG4137	Cytochrome C assembly protein
DOE60_RS16320	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DOE60_RS16345	COG2199	diguanylate cyclase activity
DOE60_RS16360	COG0287	Prephenate dehydrogenase
DOE60_RS16360	COG1605	Chorismate mutase
DOE60_RS16370	COG1605	Chorismate mutase
DOE60_RS16370	COG0077	Prephenate dehydratase
DOE60_RS16380	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DOE60_RS16385	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DOE60_RS16400	COG0542	response to heat
DOE60_RS16435	COG0477	Major facilitator Superfamily
DOE60_RS16440	COG5544	Lipoprotein
DOE60_RS16445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOE60_RS16455	COG3148	PFAM DTW domain containing protein
DOE60_RS16460	COG3118	belongs to the thioredoxin family
DOE60_RS16465	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOE60_RS16480	COG0513	Belongs to the DEAD box helicase family
DOE60_RS16490	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DOE60_RS16515	COG3086	response to oxidative stress
DOE60_RS16565	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS16570	COG1737	Transcriptional regulator
DOE60_RS16580	COG1263	PTS System
DOE60_RS16580	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS16585	COG0560	Phosphoserine phosphatase
DOE60_RS16610	COG2205	protein histidine kinase activity
DOE60_RS16615	COG3170	Tfp pilus assembly protein FimV
DOE60_RS16620	COG2204	response regulator
DOE60_RS16625	COG0347	Belongs to the P(II) protein family
DOE60_RS16630	COG3104	oligopeptide transport
DOE60_RS16640	COG0531	amino acid
DOE60_RS16645	COG3710	Transcriptional regulator
DOE60_RS16660	COG2814	Major facilitator Superfamily
DOE60_RS16665	COG3711	transcriptional antiterminator
DOE60_RS16675	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DOE60_RS16720	COG0822	iron-sulfur transferase activity
DOE60_RS16740	COG0633	Ferredoxin
DOE60_RS16745	COG2975	iron-sulfur cluster assembly
DOE60_RS16765	COG2897	thiosulfate sulfurtransferase activity
DOE60_RS16770	COG2373	Large extracellular alpha-helical protein
DOE60_RS16775	COG4953	penicillin-binding protein 1C
DOE60_RS16780	COG0243	molybdopterin cofactor binding
DOE60_RS16785	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS16830	COG2976	Protein conserved in bacteria
DOE60_RS16845	COG1645	bacterial-type flagellum-dependent swarming motility
DOE60_RS16850	COG1470	cell adhesion involved in biofilm formation
DOE60_RS16850	COG1388	LysM domain
DOE60_RS16880	COG0517	IMP dehydrogenase activity
DOE60_RS16880	COG0516	GMP reductase activity
DOE60_RS16890	COG0583	DNA-binding transcription factor activity
DOE60_RS16920	COG2200	EAL domain
DOE60_RS16935	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DOE60_RS16955	COG2233	PERMEase
DOE60_RS16965	COG1393	Belongs to the ArsC family
DOE60_RS16975	COG0628	permease
DOE60_RS16980	COG3835	regulator
DOE60_RS16985	COG2610	gluconate transmembrane transporter activity
DOE60_RS16990	COG1929	Belongs to the glycerate kinase type-1 family
DOE60_RS16995	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DOE60_RS17000	COG2716	regulation of RNA biosynthetic process
DOE60_RS17005	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DOE60_RS17010	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DOE60_RS17020	COG2321	neutral zinc metallopeptidase
DOE60_RS17040	COG1393	Belongs to the ArsC family
DOE60_RS17050	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DOE60_RS17055	COG3850	Histidine kinase
DOE60_RS17065	COG0493	'glutamate synthase
DOE60_RS17065	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS17070	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DOE60_RS17080	COG5342	invasion associated locus B
DOE60_RS17090	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DOE60_RS17110	COG3119	arylsulfatase activity
DOE60_RS17115	COG0641	radical SAM
DOE60_RS17230	COG2837	iron assimilation
DOE60_RS17250	COG4208	sulfate ABC transporter
DOE60_RS17300	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS17325	COG3530	Putative quorum-sensing-regulated virulence factor
DOE60_RS17330	COG0385	Bile acid
DOE60_RS17335	COG0583	DNA-binding transcription factor activity
DOE60_RS17345	COG3209	COG3209 Rhs family protein
DOE60_RS17365	COG3209	COG3209 Rhs family protein
DOE60_RS17410	COG0582	viral genome integration into host DNA
DOE60_RS17440	COG3415	Transposase
DOE60_RS17445	COG3415	Transposase
DOE60_RS17465	COG2199	diguanylate cyclase activity
DOE60_RS17465	COG2200	EAL domain
DOE60_RS17470	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DOE60_RS17485	COG0667	Aldo Keto reductase
DOE60_RS17490	COG3961	Belongs to the TPP enzyme family
DOE60_RS17505	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DOE60_RS17510	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DOE60_RS17515	COG0006	proline dipeptidase activity
DOE60_RS17520	COG1363	Peptidase, m42
DOE60_RS17530	COG2207	Transcriptional regulator
DOE60_RS17535	COG0436	Aminotransferase
DOE60_RS17545	COG1560	Kdo2-lipid A biosynthetic process
DOE60_RS17595	COG2161	toxin-antitoxin pair type II binding
DOE60_RS17610	COG0582	viral genome integration into host DNA
DOE60_RS17620	COG2116	formate transmembrane transporter activity
DOE60_RS17630	COG2067	long-chain fatty acid transport protein
DOE60_RS17635	COG3691	Protein conserved in bacteria
DOE60_RS17650	COG2062	phosphohistidine phosphatase, SixA
DOE60_RS17680	COG3101	peptidyl-lysine hydroxylation
DOE60_RS17695	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DOE60_RS17710	COG3423	Transcriptional regulator
DOE60_RS17735	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DOE60_RS17745	COG0586	Pfam SNARE associated Golgi protein
DOE60_RS17755	COG0285	dihydrofolate synthase activity
DOE60_RS17760	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DOE60_RS17765	COG1286	toxin biosynthetic process
DOE60_RS17770	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DOE60_RS17775	COG3829	transcription factor binding
DOE60_RS17785	COG0531	amino acid
DOE60_RS17790	COG3457	Alanine racemase
DOE60_RS17795	COG0833	amino acid
DOE60_RS17835	COG1090	epimerase
DOE60_RS17845	COG0625	glutathione transferase activity
DOE60_RS17850	COG0625	glutathione transferase activity
DOE60_RS17855	COG0622	Phosphoesterase
DOE60_RS17865	COG1609	Transcriptional regulator
DOE60_RS17885	COG3037	sugar-specific permease SgaT UlaA
DOE60_RS17890	COG3959	Transketolase, thiamine diphosphate binding domain
DOE60_RS17895	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOE60_RS17900	COG1288	antiporter activity
DOE60_RS17925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DOE60_RS17930	COG0471	metal ion transport
DOE60_RS17930	COG0490	domain, Protein
DOE60_RS17940	COG0436	Aminotransferase
DOE60_RS17950	COG0583	DNA-binding transcription factor activity
DOE60_RS18000	COG0839	Belongs to the complex I subunit 6 family
DOE60_RS18010	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DOE60_RS18015	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DOE60_RS18025	COG0835	chemotaxis
DOE60_RS18025	COG0784	Response regulator, receiver
DOE60_RS18035	COG2153	protein acetylation
DOE60_RS18040	COG4575	ribosome binding
DOE60_RS18045	COG1169	isochorismate synthase
DOE60_RS18145	COG0247	lactate metabolic process
DOE60_RS18155	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DOE60_RS18160	COG2271	Major facilitator Superfamily
DOE60_RS18165	COG0584	glycerophosphoryl diester phosphodiesterase
DOE60_RS18170	COG0583	DNA-binding transcription factor activity
DOE60_RS18175	COG2814	Major facilitator Superfamily
DOE60_RS18180	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DOE60_RS18215	COG0642	Histidine kinase
DOE60_RS18215	COG2198	Histidine kinase
DOE60_RS18245	COG4615	Cyclic peptide transporter
DOE60_RS18250	COG0659	secondary active sulfate transmembrane transporter activity
DOE60_RS18260	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS18260	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
DOE60_RS18265	COG3062	negative regulation of establishment of protein localization
DOE60_RS18275	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS18280	COG0348	domain, Protein
DOE60_RS18285	COG3043	anaerobic respiration
DOE60_RS18290	COG3005	denitrification pathway
DOE60_RS18310	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DOE60_RS18320	COG1138	Cytochrome C-type biogenesis protein
DOE60_RS18340	COG2197	response regulator
DOE60_RS18420	COG2135	peptidase activity
DOE60_RS18455	COG1061	Type III restriction enzyme res subunit
DOE60_RS18465	COG2814	Major facilitator Superfamily
DOE60_RS18475	COG4172	Belongs to the ABC transporter superfamily
DOE60_RS18480	COG4239	(ABC) transporter, permease
DOE60_RS18485	COG4174	ABC transporter (Permease)
DOE60_RS18490	COG4166	transmembrane transport
DOE60_RS18495	COG2200	EAL domain
DOE60_RS18500	COG0791	NLP P60 protein
DOE60_RS18510	COG0671	phosphoesterase, PA-phosphatase related
DOE60_RS18515	COG0523	cobalamin synthesis protein
DOE60_RS18520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DOE60_RS18525	COG3005	denitrification pathway
DOE60_RS18535	COG3381	protein complex oligomerization
DOE60_RS18575	COG1105	Belongs to the carbohydrate kinase PfkB family
DOE60_RS18580	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DOE60_RS18580	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DOE60_RS18580	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DOE60_RS18585	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DOE60_RS18590	COG2855	membrane
DOE60_RS18595	COG0583	DNA-binding transcription factor activity
DOE60_RS18600	COG0833	amino acid
DOE60_RS18605	COG4771	TonB-dependent receptor
DOE60_RS18610	COG2271	Major facilitator Superfamily
DOE60_RS18615	COG3830	Belongs to the UPF0237 family
DOE60_RS18615	COG0560	Phosphoserine phosphatase
DOE60_RS18620	COG1760	l-serine dehydratase
DOE60_RS18645	COG2311	Membrane
DOE60_RS18680	COG0493	'glutamate synthase
DOE60_RS18690	COG2949	membrane
DOE60_RS18700	COG1346	cytolysis
DOE60_RS18715	COG2271	Major facilitator Superfamily
DOE60_RS18730	COG0625	glutathione transferase activity
DOE60_RS18735	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DOE60_RS18740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DOE60_RS18750	COG1538	Outer membrane efflux protein
DOE60_RS18755	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS18760	COG0586	Pfam SNARE associated Golgi protein
DOE60_RS18775	COG1686	Belongs to the peptidase S11 family
DOE60_RS18780	COG0277	FAD linked oxidase domain protein
DOE60_RS18790	COG1732	Glycine betaine
DOE60_RS18795	COG1174	glycine betaine transport
DOE60_RS18800	COG1125	glycine betaine transport
DOE60_RS18805	COG1174	glycine betaine transport
DOE60_RS18820	COG3275	phosphorelay sensor kinase activity
DOE60_RS18830	COG4807	Protein conserved in bacteria
DOE60_RS18835	COG4808	Protein conserved in bacteria
DOE60_RS18865	COG3121	Chaperone
DOE60_RS18870	COG3188	usher protein
DOE60_RS18880	COG5455	response to cobalt ion
DOE60_RS18895	COG2188	Transcriptional regulator
DOE60_RS18900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS18905	COG1397	ADP-ribosylglycohydrolase
DOE60_RS18910	COG2211	Major facilitator Superfamily
DOE60_RS18915	COG1830	Aldolase
DOE60_RS18930	COG0826	peptidase U32
DOE60_RS18935	COG0745	RESPONSE REGULATOR receiver
DOE60_RS18940	COG2205	protein histidine kinase activity
DOE60_RS18970	COG0443	Heat shock 70 kDa protein
DOE60_RS18980	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DOE60_RS18985	COG3447	MASE1 domain protein
DOE60_RS18985	COG5002	protein histidine kinase activity
DOE60_RS18985	COG5001	Diguanylate cyclase
DOE60_RS19000	COG2982	Protein involved in outer membrane biogenesis
DOE60_RS19005	COG1253	flavin adenine dinucleotide binding
DOE60_RS19030	COG0463	Glycosyl transferase, family 2
DOE60_RS19035	COG1045	serine acetyltransferase
DOE60_RS19040	COG0438	transferase activity, transferring glycosyl groups
DOE60_RS19050	COG1216	Glycosyl transferase, family 2
DOE60_RS19055	COG0110	maltose O-acetyltransferase activity
DOE60_RS19060	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
DOE60_RS19065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DOE60_RS19070	COG1051	belongs to the nudix hydrolase family
DOE60_RS19075	COG0297	glycogen (starch) synthase activity
DOE60_RS19090	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DOE60_RS19095	COG2244	polysaccharide biosynthetic process
DOE60_RS19100	COG2327	Polysaccharide pyruvyl transferase
DOE60_RS19150	COG1216	Glycosyl transferase, family 2
DOE60_RS19170	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DOE60_RS19245	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DOE60_RS19250	COG0583	DNA-binding transcription factor activity
DOE60_RS19260	COG0531	amino acid
DOE60_RS19265	COG2925	Exonuclease
DOE60_RS19360	COG1289	transmembrane transporter activity
DOE60_RS19390	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
DOE60_RS19395	COG4656	Part of a membrane complex involved in electron transport
DOE60_RS19400	COG1454	alcohol dehydrogenase
DOE60_RS19400	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS19415	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
DOE60_RS19500	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
DOE60_RS19560	COG1122	ATPase activity
DOE60_RS19595	COG0534	Mate efflux family protein
DOE60_RS19620	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DOE60_RS19625	COG0667	Aldo Keto reductase
DOE60_RS19640	COG0583	DNA-binding transcription factor activity
DOE60_RS19645	COG0640	Transcriptional regulator
DOE60_RS19665	COG0583	DNA-binding transcription factor activity
DOE60_RS19670	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DOE60_RS19675	COG3468	outer membrane autotransporter barrel domain protein
DOE60_RS19695	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
DOE60_RS19700	COG3234	Protein of unknown function (DUF1175)
DOE60_RS19710	COG5445	Predicted secreted protein (DUF2300)
DOE60_RS19715	COG4676	Protein conserved in bacteria
DOE60_RS19785	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DOE60_RS19795	COG1418	mRNA catabolic process
DOE60_RS19800	COG0270	DNA (cytosine-5-)-methyltransferase activity
DOE60_RS19805	COG3727	T/G mismatch-specific endonuclease activity
DOE60_RS19810	COG0697	spore germination
DOE60_RS19815	COG2354	Protein conserved in bacteria
DOE60_RS19820	COG5475	Uncharacterized small protein (DUF2158)
DOE60_RS19880	COG1580	Controls the rotational direction of flagella during chemotaxis
DOE60_RS19925	COG0425	Belongs to the sulfur carrier protein TusA family
DOE60_RS19970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS19980	COG0765	amino acid transport
DOE60_RS19985	COG1126	abc transporter atp-binding protein
DOE60_RS19990	COG2197	response regulator
DOE60_RS20005	COG2197	response regulator
DOE60_RS20050	COG3012	SEC-C Motif Domain Protein
DOE60_RS20050	COG3318	Belongs to the UPF0149 family
DOE60_RS20055	COG0814	amino acid
DOE60_RS20065	COG1528	Iron-storage protein
DOE60_RS20085	COG1528	Iron-storage protein
DOE60_RS20100	COG1172	Belongs to the binding-protein-dependent transport system permease family
DOE60_RS20195	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DOE60_RS20210	COG3102	Protein conserved in bacteria
DOE60_RS20235	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DOE60_RS20240	COG1801	Protein of unknown function DUF72
DOE60_RS20245	COG1335	isochorismatase
DOE60_RS20255	COG0494	nUDIX hydrolase
DOE60_RS20260	COG0217	transcriptional regulatory protein
DOE60_RS20290	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DOE60_RS20300	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DOE60_RS20305	COG0739	heme binding
DOE60_RS20315	COG1560	Kdo2-lipid A biosynthetic process
DOE60_RS20325	COG1737	Transcriptional regulator
DOE60_RS20335	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DOE60_RS20340	COG0129	dihydroxy-acid dehydratase activity
DOE60_RS20345	COG0800	Aldolase
DOE60_RS20355	COG3141	response to X-ray
DOE60_RS20365	COG2979	Protein of unknown function (DUF533)
DOE60_RS20370	COG1770	oligopeptidase
DOE60_RS20375	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DOE60_RS20380	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DOE60_RS20390	COG2372	response to copper ion
DOE60_RS20395	COG1276	copper resistance
DOE60_RS20435	COG5562	phage envelope protein
DOE60_RS20470	COG3008	intermembrane lipid transfer
DOE60_RS20475	COG2995	paraquat-inducible protein a
DOE60_RS20480	COG1956	GAF domain-containing protein
DOE60_RS20500	COG2814	Major facilitator Superfamily
DOE60_RS20505	COG1414	Transcriptional regulator
DOE60_RS20535	COG0768	penicillin binding
DOE60_RS20540	COG2226	methyltransferase
DOE60_RS20560	COG3716	PTS system mannose fructose sorbose family IID component
DOE60_RS20565	COG3715	PTS system
DOE60_RS20570	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS20570	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS20580	COG1253	flavin adenine dinucleotide binding
DOE60_RS20590	COG2200	EAL domain
DOE60_RS20595	COG1760	l-serine dehydratase
DOE60_RS20615	COG0251	oxidation-reduction process
DOE60_RS20620	COG1199	ATP-dependent helicase activity
DOE60_RS20630	COG3065	identical protein binding
DOE60_RS20645	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DOE60_RS20655	COG2894	cell division
DOE60_RS20670	COG0179	Fumarylacetoacetate (FAA) hydrolase
DOE60_RS20710	COG2719	SpoVR family
DOE60_RS20730	COG1619	proteins homologs of microcin C7 resistance protein MccF
DOE60_RS20755	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DOE60_RS20765	COG1294	oxidase, subunit
DOE60_RS20770	COG1271	oxidase subunit
DOE60_RS20775	COG1773	rubredoxin
DOE60_RS20780	COG1999	signal sequence binding
DOE60_RS20785	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DOE60_RS20790	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
DOE60_RS20810	COG0012	GTP binding
DOE60_RS20825	COG0659	secondary active sulfate transmembrane transporter activity
DOE60_RS20880	COG0387	Pfam Sodium calcium exchanger
DOE60_RS20885	COG4572	Cation transport regulator
DOE60_RS20890	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DOE60_RS20895	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DOE60_RS20900	COG4932	domain protein
DOE60_RS20905	COG2197	response regulator
DOE60_RS20910	COG3850	Histidine kinase
DOE60_RS20920	COG2223	nitrite transmembrane transporter activity
DOE60_RS20925	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DOE60_RS20930	COG1140	nitrate reductase beta subunit
DOE60_RS20935	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DOE60_RS20940	COG2181	nitrate reductase activity
DOE60_RS20965	COG0788	formyltetrahydrofolate deformylase activity
DOE60_RS20975	COG1752	Esterase of the alpha-beta hydrolase superfamily
DOE60_RS20980	COG0745	RESPONSE REGULATOR receiver
DOE60_RS20985	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DOE60_RS21000	COG1454	alcohol dehydrogenase
DOE60_RS21000	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS21005	COG2095	MarC family integral membrane protein
DOE60_RS21040	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DOE60_RS21055	COG2350	Protein conserved in bacteria
DOE60_RS21080	COG0727	PFAM Uncharacterised protein family (UPF0153)
DOE60_RS21085	COG3047	cAMP biosynthetic process
DOE60_RS21090	COG3546	catalase activity
DOE60_RS21095	COG3685	Protein conserved in bacteria
DOE60_RS21100	COG3685	Protein conserved in bacteria
DOE60_RS21105	COG3729	General stress protein
DOE60_RS21145	COG0009	L-threonylcarbamoyladenylate synthase
DOE60_RS21160	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS21165	COG0616	signal peptide processing
DOE60_RS21215	COG0671	phosphoesterase, PA-phosphatase related
DOE60_RS21225	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DOE60_RS21230	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DOE60_RS21250	COG1349	DNA-binding transcription factor activity
DOE60_RS21260	COG5001	Diguanylate cyclase
DOE60_RS21275	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DOE60_RS21275	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DOE60_RS21330	COG3547	Transposase (IS116 IS110 IS902 family)
DOE60_RS21355	COG3436	PFAM IS66 Orf2 family protein
DOE60_RS21410	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DOE60_RS21415	COG1842	Phage shock protein A
DOE60_RS21425	COG1983	PspC domain protein
DOE60_RS21435	COG0366	Alpha amylase catalytic
DOE60_RS21440	COG1653	transport
DOE60_RS21445	COG1175	transmembrane transport
DOE60_RS21450	COG0395	ABC-type sugar transport system, permease component
DOE60_RS21455	COG1063	alcohol dehydrogenase
DOE60_RS21460	COG1082	Xylose isomerase domain protein TIM barrel
DOE60_RS21465	COG0673	inositol 2-dehydrogenase activity
DOE60_RS21470	COG1554	hydrolase, family 65, central catalytic
DOE60_RS21475	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DOE60_RS21480	COG3842	ATPase activity
DOE60_RS21490	COG1609	Transcriptional regulator
DOE60_RS21495	COG3106	COG3106 Predicted ATPase
DOE60_RS21515	COG4948	Mandelate Racemase Muconate Lactonizing
DOE60_RS21520	COG2866	Carboxypeptidase
DOE60_RS21525	COG4166	transmembrane transport
DOE60_RS21535	COG0583	DNA-binding transcription factor activity
DOE60_RS21540	COG0656	L-ascorbic acid biosynthetic process
DOE60_RS21545	COG1028	Short-chain dehydrogenase reductase Sdr
DOE60_RS21550	COG1309	transcriptional regulator
DOE60_RS21590	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DOE60_RS21610	COG0668	transmembrane transport
DOE60_RS21615	COG3182	Iron-regulated membrane protein
DOE60_RS21635	COG2840	Smr protein MutS2
DOE60_RS21645	COG0840	transmembrane signaling receptor activity
DOE60_RS21660	COG0513	Belongs to the DEAD box helicase family
DOE60_RS21685	COG2076	Multidrug Resistance protein
DOE60_RS21700	COG1013	pyruvate-flavodoxin oxidoreductase activity
DOE60_RS21700	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DOE60_RS21700	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DOE60_RS21700	COG0674	pyruvate-flavodoxin oxidoreductase activity
DOE60_RS21710	COG3042	response to heat
DOE60_RS21715	COG3187	Heat shock protein
DOE60_RS21720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOE60_RS21725	COG2911	Protein conserved in bacteria
DOE60_RS21735	COG3784	Protein of unknown function (DUF1318)
DOE60_RS21740	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DOE60_RS21745	COG4589	Belongs to the CDS family
DOE60_RS21765	COG1643	Atp-dependent helicase
DOE60_RS21770	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DOE60_RS21775	COG3038	cytochrome b561
DOE60_RS21780	COG0500	methyltransferase
DOE60_RS21790	COG0765	amino acid transport
DOE60_RS21800	COG0765	amino acid transport
DOE60_RS21805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DOE60_RS21840	COG0840	transmembrane signaling receptor activity
DOE60_RS21845	COG0583	DNA-binding transcription factor activity
DOE60_RS21850	COG5383	Protein conserved in bacteria
DOE60_RS21855	COG2272	Belongs to the type-B carboxylesterase lipase family
DOE60_RS21870	COG1304	FMN binding
DOE60_RS21880	COG1349	DNA-binding transcription factor activity
DOE60_RS21885	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DOE60_RS21890	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DOE60_RS21895	COG0434	BtpA family
DOE60_RS21900	COG3775	system Galactitol-specific IIC component
DOE60_RS21905	COG3414	Phosphotransferase system galactitol-specific IIB component
DOE60_RS21915	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DOE60_RS21920	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DOE60_RS21925	COG1275	C4-dicarboxylate transporter malic acid transport protein
DOE60_RS21930	COG0500	methyltransferase
DOE60_RS21945	COG1396	sequence-specific DNA binding
DOE60_RS21950	COG0826	peptidase U32
DOE60_RS21970	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DOE60_RS21975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DOE60_RS22015	COG3238	Protein conserved in bacteria
DOE60_RS22025	COG2130	NADP-dependent
DOE60_RS22030	COG1802	Transcriptional regulator
DOE60_RS22035	COG4772	TonB-dependent receptor
DOE60_RS22065	COG2211	Major facilitator Superfamily
DOE60_RS22090	COG2181	nitrate reductase activity
DOE60_RS22095	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DOE60_RS22100	COG1140	nitrate reductase beta subunit
DOE60_RS22105	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DOE60_RS22150	COG0243	molybdopterin cofactor binding
DOE60_RS22150	COG3383	formate dehydrogenase (NAD+) activity
DOE60_RS22155	COG0243	molybdopterin cofactor binding
DOE60_RS22155	COG3383	formate dehydrogenase (NAD+) activity
DOE60_RS22160	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS22165	COG2864	formate dehydrogenase
DOE60_RS22170	COG1064	alcohol dehydrogenase
DOE60_RS22190	COG1764	response to oxidative stress
DOE60_RS22205	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DOE60_RS22220	COG1609	Transcriptional regulator
DOE60_RS22250	COG0251	oxidation-reduction process
DOE60_RS22255	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DOE60_RS22280	COG2271	Major facilitator Superfamily
DOE60_RS22285	COG1063	alcohol dehydrogenase
DOE60_RS22290	COG2186	Transcriptional regulator
DOE60_RS22300	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
DOE60_RS22305	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
DOE60_RS22330	COG1773	rubredoxin
DOE60_RS22380	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS22385	COG0583	DNA-binding transcription factor activity
DOE60_RS22415	COG4566	intracellular signal transduction
DOE60_RS22430	COG2814	Major facilitator Superfamily
DOE60_RS22445	COG3111	PFAM Bacterial OB fold (BOF) protein
DOE60_RS22450	COG1546	Belongs to the CinA family
DOE60_RS22455	COG3729	General stress protein
DOE60_RS22470	COG4221	oxidoreductase activity
DOE60_RS22475	COG1802	Transcriptional regulator
DOE60_RS22485	COG0246	Mannitol dehydrogenase
DOE60_RS22490	COG0477	Major facilitator Superfamily
DOE60_RS22495	COG1063	alcohol dehydrogenase
DOE60_RS22515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DOE60_RS22530	COG0243	molybdopterin cofactor binding
DOE60_RS22535	COG0243	molybdopterin cofactor binding
DOE60_RS22540	COG0437	4 iron, 4 sulfur cluster binding
DOE60_RS22545	COG3302	dmso reductase anchor subunit
DOE60_RS22585	COG1940	carbohydrate kinase activity
DOE60_RS22595	COG0583	DNA-binding transcription factor activity
DOE60_RS22600	COG2814	Major facilitator Superfamily
DOE60_RS22610	COG3591	Belongs to the peptidase S1B family
DOE60_RS22630	COG0628	permease
DOE60_RS22635	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DOE60_RS22640	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DOE60_RS22650	COG0531	amino acid
DOE60_RS22655	COG3136	membrane protein required for alginate biosynthesis
DOE60_RS22660	COG0745	RESPONSE REGULATOR receiver
DOE60_RS22670	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DOE60_RS22675	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DOE60_RS22680	COG2205	protein histidine kinase activity
DOE60_RS22705	COG5339	Protein conserved in bacteria
DOE60_RS22710	COG1609	Transcriptional regulator
DOE60_RS22715	COG1263	PTS System
DOE60_RS22715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DOE60_RS22720	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DOE60_RS22730	COG0673	inositol 2-dehydrogenase activity
DOE60_RS22770	COG4659	FMN binding
DOE60_RS22780	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DOE60_RS22790	COG0625	glutathione transferase activity
DOE60_RS22810	COG3895	Periplasmic Protein
DOE60_RS22835	COG1566	PFAM secretion protein HlyD family protein
DOE60_RS22850	COG4989	oxidoreductase activity
DOE60_RS22855	COG3313	Fe-S protein
DOE60_RS22860	COG1309	transcriptional regulator
DOE60_RS22865	COG1902	pentaerythritol trinitrate reductase activity
DOE60_RS22880	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DOE60_RS22885	COG0791	NLP P60 protein
DOE60_RS22910	COG0583	DNA-binding transcription factor activity
DOE60_RS22915	COG2814	Major facilitator Superfamily
DOE60_RS22920	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DOE60_RS22925	COG0307	riboflavin synthase, alpha
DOE60_RS23095	COG0784	Response regulator, receiver
DOE60_RS23095	COG2205	protein histidine kinase activity
DOE60_RS23105	COG0789	Transcriptional regulator
DOE60_RS23110	COG3272	Protein of unknown function (DUF1722)
DOE60_RS23145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS23155	COG2267	carboxylic ester hydrolase activity
DOE60_RS23160	COG0531	amino acid
DOE60_RS23175	COG1376	ErfK ybiS ycfS ynhG family protein
DOE60_RS23190	COG0719	Fe-S assembly protein
DOE60_RS23195	COG0396	ATPase activity
DOE60_RS23200	COG0719	Fe-S assembly protein
DOE60_RS23205	COG0316	Belongs to the HesB IscA family
DOE60_RS23210	COG1823	symporter activity
DOE60_RS23220	COG2050	protein possibly involved in aromatic compounds catabolism
DOE60_RS23225	COG0277	FAD linked oxidase domain protein
DOE60_RS23225	COG0247	lactate metabolic process
DOE60_RS23230	COG0628	permease
DOE60_RS23245	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DOE60_RS23245	COG0574	Belongs to the PEP-utilizing enzyme family
DOE60_RS23255	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DOE60_RS23260	COG4256	Hemin uptake protein
DOE60_RS23275	COG0791	NLP P60 protein
DOE60_RS23285	COG0386	Belongs to the glutathione peroxidase family
DOE60_RS23350	COG3137	Salt-induced outer membrane protein
DOE60_RS23355	COG1105	Belongs to the carbohydrate kinase PfkB family
DOE60_RS23365	COG3001	Fructosamine kinase
DOE60_RS23375	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DOE60_RS23380	COG1988	membrane-bound metal-dependent
DOE60_RS23385	COG1823	symporter activity
DOE60_RS23395	COG0753	catalase activity
DOE60_RS23405	COG1486	melibiose metabolic process
DOE60_RS23410	COG1917	Cupin 2, conserved barrel domain protein
DOE60_RS23410	COG2169	Transcriptional regulator
DOE60_RS23415	COG1447	Phosphotransferase system cellobiose-specific component IIA
DOE60_RS23420	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DOE60_RS23425	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DOE60_RS23430	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DOE60_RS23435	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DOE60_RS23440	COG0322	excinuclease ABC activity
DOE60_RS23445	COG3678	ATP-independent chaperone mediated protein folding
DOE60_RS23465	COG1012	belongs to the aldehyde dehydrogenase family
DOE60_RS23485	COG0494	nUDIX hydrolase
DOE60_RS23510	COG0778	Nitroreductase
DOE60_RS23515	COG0616	signal peptide processing
DOE60_RS23520	COG0252	asparaginase activity
DOE60_RS23525	COG1335	isochorismatase
DOE60_RS23530	COG2814	Major facilitator Superfamily
DOE60_RS23535	COG1349	DNA-binding transcription factor activity
DOE60_RS23540	COG0667	Aldo Keto reductase
DOE60_RS23545	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOE60_RS23550	COG0191	fructose-bisphosphate aldolase activity
DOE60_RS23555	COG1063	alcohol dehydrogenase
DOE60_RS23560	COG2271	Major facilitator Superfamily
DOE60_RS23565	COG1063	alcohol dehydrogenase
DOE60_RS23575	COG3139	Protein of unknown function (DUF1315)
DOE60_RS23600	COG0656	L-ascorbic acid biosynthetic process
DOE60_RS23605	COG0641	radical SAM
DOE60_RS23610	COG3713	MltA-interacting MipA family protein
DOE60_RS23615	COG2766	serine protein kinase
DOE60_RS23630	COG2199	diguanylate cyclase activity
DOE60_RS23635	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DOE60_RS23650	COG2207	Transcriptional regulator
DOE60_RS23655	COG2807	transmembrane transport
DOE60_RS23660	COG3189	MarR family transcriptional regulator
DOE60_RS23670	COG3042	response to heat
DOE60_RS23680	COG2261	transglycosylase associated protein
DOE60_RS23700	COG3615	Tellurite resistance protein tehB
DOE60_RS23720	COG1605	Chorismate mutase
DOE60_RS23735	COG0789	Transcriptional regulator
DOE60_RS23750	COG3443	Belongs to the bacterial solute-binding protein 9 family
DOE60_RS23765	COG0668	transmembrane transport
DOE60_RS23770	COG1124	(ABC) transporter
DOE60_RS23790	COG0747	negative chemotaxis
DOE60_RS23805	COG3038	cytochrome b561
DOE60_RS23815	COG0071	Belongs to the small heat shock protein (HSP20) family
DOE60_RS23920	COG0538	isocitrate dehydrogenase activity