locus-tag class description CFSAN000658_RS00020 PF17345 Family of unknown function (DUF5375) CFSAN000658_RS00030 PF03614 Repressor of phase-1 flagellin CFSAN000658_RS00035 PF00700 Bacterial flagellin C-terminal helical region CFSAN000658_RS00035 PF00669 Bacterial flagellin N-terminal helical region CFSAN000658_RS00035 PF08884 Flagellin D3 domain CFSAN000658_RS00040 PF00239 Resolvase, N terminal domain CFSAN000658_RS00040 PF02796 Helix-turn-helix domain of resolvase CFSAN000658_RS00045 PF06722 Protein of unknown function (DUF1205) CFSAN000658_RS00050 PF00664 ABC transporter transmembrane region CFSAN000658_RS00050 PF00005 ABC transporter CFSAN000658_RS00060 PF00756 Putative esterase CFSAN000658_RS00065 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS00065 PF00593 TonB dependent receptor CFSAN000658_RS00075 PF00805 Pentapeptide repeats (8 copies) CFSAN000658_RS00080 PF04393 Protein of unknown function (DUF535) CFSAN000658_RS00095 PF03824 High-affinity nickel-transport protein CFSAN000658_RS00100 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS00105 PF00072 Response regulator receiver domain CFSAN000658_RS00105 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS00125 PF01970 Tripartite tricarboxylate transporter TctA family CFSAN000658_RS00130 PF08943 CsiD CFSAN000658_RS00135 PF01266 FAD dependent oxidoreductase CFSAN000658_RS00140 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS00145 PF00202 Aminotransferase class-III CFSAN000658_RS00150 PF00324 Amino acid permease CFSAN000658_RS00155 PF07729 FCD domain CFSAN000658_RS00155 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS00160 PF04972 BON domain CFSAN000658_RS00160 PF01476 LysM domain CFSAN000658_RS00165 PF01679 Proteolipid membrane potential modulator CFSAN000658_RS00170 PF01022 Bacterial regulatory protein, arsR family CFSAN000658_RS00175 PF00581 Rhodanese-like domain CFSAN000658_RS00175 PF11127 Protein of unknown function (DUF2892) CFSAN000658_RS00185 PF00816 H-NS histone family CFSAN000658_RS00190 PF06610 L-alanine exporter CFSAN000658_RS00195 PF09400 Protein of unknown function (DUF2002) CFSAN000658_RS00200 PF05957 Bacterial protein of unknown function (DUF883) CFSAN000658_RS00205 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS00205 PF00155 Aminotransferase class I and II CFSAN000658_RS00210 PF02627 Carboxymuconolactone decarboxylase family CFSAN000658_RS00220 PF00462 Glutaredoxin CFSAN000658_RS00225 PF07972 NrdI Flavodoxin like CFSAN000658_RS00230 PF02867 Ribonucleotide reductase, barrel domain CFSAN000658_RS00230 PF00317 Ribonucleotide reductase, all-alpha domain CFSAN000658_RS00230 PF08343 Ribonucleotide reductase N-terminal CFSAN000658_RS00235 PF00268 Ribonucleotide reductase, small chain CFSAN000658_RS00240 PF00571 CBS domain CFSAN000658_RS00240 PF00005 ABC transporter CFSAN000658_RS00245 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS00250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFSAN000658_RS00255 PF07690 Major Facilitator Superfamily CFSAN000658_RS00260 PF01047 MarR family CFSAN000658_RS00265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS00265 PF00529 HlyD membrane-fusion protein of T1SS CFSAN000658_RS00270 PF07690 Major Facilitator Superfamily CFSAN000658_RS00280 PF02664 S-Ribosylhomocysteinase (LuxS) CFSAN000658_RS00285 PF04262 Glutamate-cysteine ligase CFSAN000658_RS00290 PF09335 SNARE associated Golgi protein CFSAN000658_RS00295 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS00325 PF02599 Global regulator protein family CFSAN000658_RS00330 PF02272 DHHA1 domain CFSAN000658_RS00330 PF01411 tRNA synthetases class II (A) CFSAN000658_RS00330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFSAN000658_RS00335 PF02631 RecX family CFSAN000658_RS00340 PF00154 recA bacterial DNA recombination protein CFSAN000658_RS00345 PF02464 Competence-damaged protein CFSAN000658_RS00355 PF13406 Transglycosylase SLT domain CFSAN000658_RS00360 PF03608 PTS system enzyme II sorbitol-specific factor CFSAN000658_RS00365 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CFSAN000658_RS00365 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CFSAN000658_RS00370 PF03829 PTS system glucitol/sorbitol-specific IIA component CFSAN000658_RS00375 PF00106 short chain dehydrogenase CFSAN000658_RS00380 PF06923 Glucitol operon activator protein (GutM) CFSAN000658_RS00390 PF00455 DeoR C terminal sensor domain CFSAN000658_RS00390 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS00395 PF01380 SIS domain CFSAN000658_RS00395 PF00571 CBS domain CFSAN000658_RS00400 PF01590 GAF domain CFSAN000658_RS00400 PF00158 Sigma-54 interaction domain CFSAN000658_RS00405 PF00258 Flavodoxin CFSAN000658_RS00405 PF00301 Rubredoxin CFSAN000658_RS00405 PF00753 Metallo-beta-lactamase superfamily CFSAN000658_RS00410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS00410 PF18113 Rubredoxin binding C-terminal domain CFSAN000658_RS00420 PF12800 4Fe-4S binding domain CFSAN000658_RS00420 PF13247 4Fe-4S dicluster domain CFSAN000658_RS00430 PF01750 Hydrogenase maturation protease CFSAN000658_RS00435 PF07450 Formate hydrogenlyase maturation protein HycH CFSAN000658_RS00440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFSAN000658_RS00445 PF12838 4Fe-4S dicluster domain CFSAN000658_RS00450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CFSAN000658_RS00450 PF00374 Nickel-dependent hydrogenase CFSAN000658_RS00450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CFSAN000658_RS00455 PF00146 NADH dehydrogenase CFSAN000658_RS00460 PF00361 Proton-conducting membrane transporter CFSAN000658_RS00465 PF13247 4Fe-4S dicluster domain CFSAN000658_RS00470 PF11046 Transcriptional repressor of hyc and hyp operons CFSAN000658_RS00475 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CFSAN000658_RS00480 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFSAN000658_RS00485 PF01455 HupF/HypC family CFSAN000658_RS00490 PF01924 Hydrogenase formation hypA family CFSAN000658_RS00495 PF02769 AIR synthase related protein, C-terminal domain CFSAN000658_RS00495 PF00586 AIR synthase related protein, N-terminal domain CFSAN000658_RS00500 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS00500 PF01590 GAF domain CFSAN000658_RS00500 PF00158 Sigma-54 interaction domain CFSAN000658_RS00505 PF11756 Nitrous oxide-stimulated promoter CFSAN000658_RS00510 PF01297 Zinc-uptake complex component A periplasmic CFSAN000658_RS00515 PF00005 ABC transporter CFSAN000658_RS00520 PF00950 ABC 3 transport family CFSAN000658_RS00525 PF00950 ABC 3 transport family CFSAN000658_RS00530 PF03421 YopJ Serine/Threonine acetyltransferase CFSAN000658_RS00540 PF12833 Helix-turn-helix domain CFSAN000658_RS00555 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) CFSAN000658_RS00560 PF01514 Secretory protein of YscJ/FliF family CFSAN000658_RS00570 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CFSAN000658_RS00575 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CFSAN000658_RS00580 PF12833 Helix-turn-helix domain CFSAN000658_RS00585 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS00590 PF01464 Transglycosylase SLT domain CFSAN000658_RS00595 PF09119 SicP binding CFSAN000658_RS00595 PF00102 Protein-tyrosine phosphatase CFSAN000658_RS00595 PF03545 Yersinia virulence determinant (YopE) CFSAN000658_RS00600 PF05932 Tir chaperone protein (CesT) family CFSAN000658_RS00610 PF00550 Phosphopantetheine attachment site CFSAN000658_RS00615 PF09052 SipA N-terminal domain CFSAN000658_RS00620 PF06511 Type III secretion systems tip complex components CFSAN000658_RS00625 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) CFSAN000658_RS00630 PF16535 Type III cell invasion protein SipB CFSAN000658_RS00630 PF04888 Secretion system effector C (SseC) like family CFSAN000658_RS00635 PF07720 Tetratricopeptide repeat CFSAN000658_RS00640 PF01312 FlhB HrpN YscU SpaS Family CFSAN000658_RS00645 PF01311 Bacterial export proteins, family 1 CFSAN000658_RS00650 PF01313 Bacterial export proteins, family 3 CFSAN000658_RS00655 PF00813 FliP family CFSAN000658_RS00660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFSAN000658_RS00665 PF02510 Surface presentation of antigens protein CFSAN000658_RS00670 PF02090 Salmonella surface presentation of antigen gene type M protein CFSAN000658_RS00675 PF18269 T3SS EscN ATPase C-terminal domain CFSAN000658_RS00675 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFSAN000658_RS00675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS00680 PF03519 Invasion protein B family CFSAN000658_RS00685 PF00771 FHIPEP family CFSAN000658_RS00690 PF07201 HrpJ-like domain CFSAN000658_RS00695 PF03958 Bacterial type II/III secretion system short domain CFSAN000658_RS00695 PF00263 Bacterial type II and III secretion system protein CFSAN000658_RS00700 PF12833 Helix-turn-helix domain CFSAN000658_RS00705 PF04741 InvH outer membrane lipoprotein CFSAN000658_RS00720 PF13737 Transposase DDE domain CFSAN000658_RS00725 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS00735 PF05192 MutS domain III CFSAN000658_RS00735 PF05190 MutS family domain IV CFSAN000658_RS00735 PF01624 MutS domain I CFSAN000658_RS00735 PF00488 MutS domain V CFSAN000658_RS00735 PF05188 MutS domain II CFSAN000658_RS00745 PF07690 Major Facilitator Superfamily CFSAN000658_RS00750 PF03466 LysR substrate binding domain CFSAN000658_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS00755 PF02447 GntP family permease CFSAN000658_RS00760 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS00765 PF01261 Xylose isomerase-like TIM barrel CFSAN000658_RS00770 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS00775 PF17042 Nucleotide-binding C-terminal domain CFSAN000658_RS00775 PF07005 Sugar-binding N-terminal domain CFSAN000658_RS00780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFSAN000658_RS00780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFSAN000658_RS00785 PF00455 DeoR C terminal sensor domain CFSAN000658_RS00785 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS00790 PF01047 MarR family CFSAN000658_RS00795 PF02441 Flavoprotein CFSAN000658_RS00800 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CFSAN000658_RS00810 PF00140 Sigma-70 factor, region 1.2 CFSAN000658_RS00810 PF04542 Sigma-70 region 2 CFSAN000658_RS00810 PF04539 Sigma-70 region 3 CFSAN000658_RS00810 PF04545 Sigma-70, region 4 CFSAN000658_RS00815 PF01551 Peptidase family M23 CFSAN000658_RS00815 PF01476 LysM domain CFSAN000658_RS00825 PF01975 Survival protein SurE CFSAN000658_RS00830 PF01142 tRNA pseudouridine synthase D (TruD) CFSAN000658_RS00835 PF02542 YgbB family CFSAN000658_RS00840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFSAN000658_RS00845 PF04977 Septum formation initiator CFSAN000658_RS00850 PF12084 Protein of unknown function (DUF3561) CFSAN000658_RS00860 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS00865 PF01507 Phosphoadenosine phosphosulfate reductase family CFSAN000658_RS00870 PF04389 Peptidase family M28 CFSAN000658_RS00875 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CFSAN000658_RS00880 PF01867 CRISPR associated protein Cas1 CFSAN000658_RS00890 PF09704 CRISPR-associated protein (Cas_Cas5) CFSAN000658_RS00895 PF09344 CT1975-like protein CFSAN000658_RS00905 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CFSAN000658_RS00910 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS00910 PF18019 HD domain CFSAN000658_RS00910 PF00270 DEAD/DEAH box helicase CFSAN000658_RS00915 PF11047 Salmonella outer protein D CFSAN000658_RS00920 PF01507 Phosphoadenosine phosphosulfate reductase family CFSAN000658_RS00925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFSAN000658_RS00925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFSAN000658_RS00930 PF00667 FAD binding domain CFSAN000658_RS00930 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS00930 PF00258 Flavodoxin CFSAN000658_RS00935 PF01242 6-pyruvoyl tetrahydropterin synthase CFSAN000658_RS00940 PF12706 Beta-lactamase superfamily domain CFSAN000658_RS00940 PF03099 Biotin/lipoate A/B protein ligase family CFSAN000658_RS00945 PF04055 Radical SAM superfamily CFSAN000658_RS00950 PF00113 Enolase, C-terminal TIM barrel domain CFSAN000658_RS00950 PF03952 Enolase, N-terminal domain CFSAN000658_RS00955 PF06418 CTP synthase N-terminus CFSAN000658_RS00955 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS00960 PF03819 MazG nucleotide pyrophosphohydrolase domain CFSAN000658_RS00970 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CFSAN000658_RS00975 PF02824 TGS domain CFSAN000658_RS00975 PF04607 Region found in RelA / SpoT proteins CFSAN000658_RS00975 PF13291 ACT domain CFSAN000658_RS00980 PF05958 tRNA (Uracil-5-)-methyltransferase CFSAN000658_RS00980 PF01938 TRAM domain CFSAN000658_RS00985 PF00072 Response regulator receiver domain CFSAN000658_RS00985 PF01627 Hpt domain CFSAN000658_RS00985 PF00672 HAMP domain CFSAN000658_RS00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS00985 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS00985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CFSAN000658_RS00990 PF02595 Glycerate kinase family CFSAN000658_RS00995 PF13378 Enolase C-terminal domain-like CFSAN000658_RS01000 PF13378 Enolase C-terminal domain-like CFSAN000658_RS01000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFSAN000658_RS01005 PF07690 Major Facilitator Superfamily CFSAN000658_RS01010 PF00258 Flavodoxin CFSAN000658_RS01015 PF00849 RNA pseudouridylate synthase CFSAN000658_RS01020 PF04287 tRNA pseudouridine synthase C CFSAN000658_RS01025 PF07348 Syd protein (SUKH-2) CFSAN000658_RS01030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CFSAN000658_RS01030 PF14489 QueF-like protein CFSAN000658_RS01035 PF03641 Possible lysine decarboxylase CFSAN000658_RS01035 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CFSAN000658_RS01035 PF11892 Domain of unknown function (DUF3412) CFSAN000658_RS01045 PF03315 Serine dehydratase beta chain CFSAN000658_RS01045 PF03313 Serine dehydratase alpha chain CFSAN000658_RS01050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFSAN000658_RS01050 PF01367 5'-3' exonuclease, C-terminal SAM fold CFSAN000658_RS01055 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS01060 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS01065 PF07690 Major Facilitator Superfamily CFSAN000658_RS01070 PF07882 L-fucose isomerase, second N-terminal domain CFSAN000658_RS01070 PF02952 L-fucose isomerase, C-terminal domain CFSAN000658_RS01070 PF07881 L-fucose isomerase, first N-terminal domain CFSAN000658_RS01075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS01075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS01080 PF05025 RbsD / FucU transport protein family CFSAN000658_RS01085 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS01085 PF00455 DeoR C terminal sensor domain CFSAN000658_RS01090 PF18125 RlmM ferredoxin-like domain CFSAN000658_RS01090 PF01728 FtsJ-like methyltransferase CFSAN000658_RS01095 PF04241 Protein of unknown function (DUF423) CFSAN000658_RS01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS01100 PF03466 LysR substrate binding domain CFSAN000658_RS01105 PF06004 Bacterial protein of unknown function (DUF903) CFSAN000658_RS01110 PF00266 Aminotransferase class-V CFSAN000658_RS01115 PF02657 Fe-S metabolism associated domain CFSAN000658_RS01120 PF00892 EamA-like transporter family CFSAN000658_RS01125 PF00899 ThiF family CFSAN000658_RS01130 PF06725 3D domain CFSAN000658_RS01130 PF03562 MltA specific insert domain CFSAN000658_RS01145 PF11741 AMIN domain CFSAN000658_RS01145 PF01520 N-acetylmuramoyl-L-alanine amidase CFSAN000658_RS01150 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS01150 PF00696 Amino acid kinase family CFSAN000658_RS01155 PF13538 UvrD-like helicase C-terminal domain CFSAN000658_RS01160 PF12705 PD-(D/E)XK nuclease superfamily CFSAN000658_RS01160 PF00580 UvrD/REP helicase N-terminal domain CFSAN000658_RS01160 PF13361 UvrD-like helicase C-terminal domain CFSAN000658_RS01165 PF05193 Peptidase M16 inactive domain CFSAN000658_RS01165 PF16187 Middle or third domain of peptidase_M16 CFSAN000658_RS01165 PF00675 Insulinase (Peptidase family M16) CFSAN000658_RS01170 PF17946 RecC C-terminal domain CFSAN000658_RS01175 PF12528 Type II secretion prepilin peptidase dependent protein C CFSAN000658_RS01175 PF07963 Prokaryotic N-terminal methylation motif CFSAN000658_RS01180 PF10713 Protein of unknown function (DUF2509) CFSAN000658_RS01185 PF07963 Prokaryotic N-terminal methylation motif CFSAN000658_RS01190 PF07963 Prokaryotic N-terminal methylation motif CFSAN000658_RS01200 PF00303 Thymidylate synthase CFSAN000658_RS01205 PF01790 Prolipoprotein diacylglyceryl transferase CFSAN000658_RS01210 PF01590 GAF domain CFSAN000658_RS01210 PF05524 PEP-utilising enzyme, N-terminal CFSAN000658_RS01210 PF00391 PEP-utilising enzyme, mobile domain CFSAN000658_RS01210 PF02896 PEP-utilising enzyme, TIM barrel domain CFSAN000658_RS01215 PF00293 NUDIX domain CFSAN000658_RS01225 PF02976 DNA mismatch repair enzyme MutH CFSAN000658_RS01230 PF03741 Integral membrane protein TerC family CFSAN000658_RS01235 PF06004 Bacterial protein of unknown function (DUF903) CFSAN000658_RS01240 PF00248 Aldo/keto reductase family CFSAN000658_RS01245 PF07690 Major Facilitator Superfamily CFSAN000658_RS01250 PF01553 Acyltransferase CFSAN000658_RS01250 PF00501 AMP-binding enzyme CFSAN000658_RS01255 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS01260 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS01265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFSAN000658_RS01265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFSAN000658_RS01270 PF03466 LysR substrate binding domain CFSAN000658_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS01275 PF01177 Asp/Glu/Hydantoin racemase CFSAN000658_RS01280 PF00083 Sugar (and other) transporter CFSAN000658_RS01290 PF04962 KduI/IolB family CFSAN000658_RS01295 PF00108 Thiolase, N-terminal domain CFSAN000658_RS01295 PF02803 Thiolase, C-terminal domain CFSAN000658_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS01300 PF03466 LysR substrate binding domain CFSAN000658_RS01310 PF03222 Tryptophan/tyrosine permease family CFSAN000658_RS01315 PF02583 Metal-sensitive transcriptional repressor CFSAN000658_RS01320 PF03824 High-affinity nickel-transport protein CFSAN000658_RS01340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS01340 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS01345 PF00577 Outer membrane usher protein CFSAN000658_RS01345 PF13953 PapC C-terminal domain CFSAN000658_RS01345 PF13954 PapC N-terminal domain CFSAN000658_RS01350 PF00419 Fimbrial protein CFSAN000658_RS01360 PF13505 Outer membrane protein beta-barrel domain CFSAN000658_RS01365 PF01850 PIN domain CFSAN000658_RS01380 PF01551 Peptidase family M23 CFSAN000658_RS01380 PF01476 LysM domain CFSAN000658_RS01385 PF00293 NUDIX domain CFSAN000658_RS01390 PF00152 tRNA synthetases class II (D, K and N) CFSAN000658_RS01390 PF01336 OB-fold nucleic acid binding domain CFSAN000658_RS01395 PF00472 RF-1 domain CFSAN000658_RS01395 PF03462 PCRF domain CFSAN000658_RS01400 PF02272 DHHA1 domain CFSAN000658_RS01400 PF01368 DHH family CFSAN000658_RS01400 PF17768 RecJ OB domain CFSAN000658_RS01405 PF13098 Thioredoxin-like domain CFSAN000658_RS01405 PF10411 Disulfide bond isomerase protein N-terminus CFSAN000658_RS01410 PF00589 Phage integrase family CFSAN000658_RS01410 PF02899 Phage integrase, N-terminal SAM-like domain CFSAN000658_RS01415 PF00258 Flavodoxin CFSAN000658_RS01420 PF07254 Membrane-bound toxin component of toxin-antitoxin system CFSAN000658_RS01425 PF03937 Flavinator of succinate dehydrogenase CFSAN000658_RS01435 PF01571 Aminomethyltransferase folate-binding domain CFSAN000658_RS01440 PF03006 Haemolysin-III related CFSAN000658_RS01445 PF04266 ASCH domain CFSAN000658_RS01450 PF00232 Glycosyl hydrolase family 1 CFSAN000658_RS01460 PF02347 Glycine cleavage system P-protein CFSAN000658_RS01465 PF01597 Glycine cleavage H-protein CFSAN000658_RS01470 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFSAN000658_RS01470 PF01571 Aminomethyltransferase folate-binding domain CFSAN000658_RS01475 PF01494 FAD binding domain CFSAN000658_RS01480 PF01494 FAD binding domain CFSAN000658_RS01485 PF00557 Metallopeptidase family M24 CFSAN000658_RS01485 PF05195 Aminopeptidase P, N-terminal domain CFSAN000658_RS01490 PF03695 Uncharacterised protein family (UPF0149) CFSAN000658_RS01495 PF05164 Cell division protein ZapA CFSAN000658_RS01500 PF01812 5-formyltetrahydrofolate cyclo-ligase family CFSAN000658_RS01505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFSAN000658_RS01505 PF01842 ACT domain CFSAN000658_RS01505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFSAN000658_RS01510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CFSAN000658_RS01515 PF03466 LysR substrate binding domain CFSAN000658_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS01520 PF04402 Protein of unknown function (DUF541) CFSAN000658_RS01525 PF01810 LysE type translocator CFSAN000658_RS01530 PF05552 Conserved TM helix CFSAN000658_RS01530 PF00924 Mechanosensitive ion channel CFSAN000658_RS01535 PF01116 Fructose-bisphosphate aldolase class-II CFSAN000658_RS01540 PF00162 Phosphoglycerate kinase CFSAN000658_RS01545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS01545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFSAN000658_RS01565 PF00005 ABC transporter CFSAN000658_RS01570 PF00005 ABC transporter CFSAN000658_RS01580 PF05068 Mannitol repressor CFSAN000658_RS01585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CFSAN000658_RS01590 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS01590 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS01595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS01595 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS01600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS01605 PF00456 Transketolase, thiamine diphosphate binding domain CFSAN000658_RS01605 PF02779 Transketolase, pyrimidine binding domain CFSAN000658_RS01605 PF02780 Transketolase, C-terminal domain CFSAN000658_RS01610 PF01435 Peptidase family M48 CFSAN000658_RS01615 PF00491 Arginase family CFSAN000658_RS01620 PF17944 Arginine decarboxylase C-terminal helical extension CFSAN000658_RS01620 PF17810 Arginine decarboxylase helical bundle domain CFSAN000658_RS01620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFSAN000658_RS01635 PF00438 S-adenosylmethionine synthetase, N-terminal domain CFSAN000658_RS01635 PF02773 S-adenosylmethionine synthetase, C-terminal domain CFSAN000658_RS01635 PF02772 S-adenosylmethionine synthetase, central domain CFSAN000658_RS01640 PF00083 Sugar (and other) transporter CFSAN000658_RS01645 PF17283 SprT-like zinc ribbon domain CFSAN000658_RS01645 PF10263 SprT-like family CFSAN000658_RS01650 PF04231 Endonuclease I CFSAN000658_RS01655 PF04452 RNA methyltransferase CFSAN000658_RS01660 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CFSAN000658_RS01660 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CFSAN000658_RS01665 PF02622 Uncharacterized ACR, COG1678 CFSAN000658_RS01670 PF03652 Holliday junction resolvase CFSAN000658_RS01680 PF00437 Type II/IV secretion system protein CFSAN000658_RS01685 PF01168 Alanine racemase, N-terminal domain CFSAN000658_RS01690 PF02325 YGGT family CFSAN000658_RS01695 PF02594 Uncharacterised ACR, YggU family COG1872 CFSAN000658_RS01700 PF01725 Ham1 family CFSAN000658_RS01705 PF04055 Radical SAM superfamily CFSAN000658_RS01705 PF06969 HemN C-terminal domain CFSAN000658_RS01710 PF06717 Protein of unknown function (DUF1202) CFSAN000658_RS01715 PF00710 Asparaginase, N-terminal CFSAN000658_RS01715 PF17763 Glutaminase/Asparaginase C-terminal domain CFSAN000658_RS01720 PF11101 Protein of unknown function (DUF2884) CFSAN000658_RS01725 PF04320 Protein with unknown function (DUF469) CFSAN000658_RS01730 PF02390 Putative methyltransferase CFSAN000658_RS01735 PF14815 NUDIX domain CFSAN000658_RS01735 PF00633 Helix-hairpin-helix motif CFSAN000658_RS01735 PF00730 HhH-GPD superfamily base excision DNA repair protein CFSAN000658_RS01740 PF04362 Bacterial Fe(2+) trafficking CFSAN000658_RS01745 PF01464 Transglycosylase SLT domain CFSAN000658_RS01745 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CFSAN000658_RS01750 PF03825 Nucleoside H+ symporter CFSAN000658_RS01755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CFSAN000658_RS01755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFSAN000658_RS01755 PF01276 Orn/Lys/Arg decarboxylase, major domain CFSAN000658_RS01765 PF04474 Protein of unknown function (DUF554) CFSAN000658_RS01775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFSAN000658_RS01780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CFSAN000658_RS01780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CFSAN000658_RS01785 PF01575 MaoC like domain CFSAN000658_RS01790 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS01795 PF03466 LysR substrate binding domain CFSAN000658_RS01800 PF00884 Sulfatase CFSAN000658_RS01805 PF04055 Radical SAM superfamily CFSAN000658_RS01810 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS01820 PF13520 Amino acid permease CFSAN000658_RS01830 PF01266 FAD dependent oxidoreductase CFSAN000658_RS01835 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS01840 PF04965 Gene 25-like lysozyme CFSAN000658_RS01850 PF01522 Polysaccharide deacetylase CFSAN000658_RS01860 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS01865 PF02837 Glycosyl hydrolases family 2, sugar binding domain CFSAN000658_RS01865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CFSAN000658_RS01865 PF00703 Glycosyl hydrolases family 2 CFSAN000658_RS01875 PF03573 outer membrane porin, OprD family CFSAN000658_RS01880 PF07690 Major Facilitator Superfamily CFSAN000658_RS01885 PF03786 D-mannonate dehydratase (UxuA) CFSAN000658_RS01890 PF08125 Mannitol dehydrogenase C-terminal domain CFSAN000658_RS01890 PF01232 Mannitol dehydrogenase Rossmann domain CFSAN000658_RS01895 PF02614 Glucuronate isomerase CFSAN000658_RS01905 PF05257 CHAP domain CFSAN000658_RS01905 PF03738 Glutathionylspermidine synthase preATP-grasp CFSAN000658_RS01910 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS01920 PF01497 Periplasmic binding protein CFSAN000658_RS01925 PF01455 HupF/HypC family CFSAN000658_RS01930 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CFSAN000658_RS01935 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CFSAN000658_RS01940 PF01750 Hydrogenase maturation protease CFSAN000658_RS01945 PF00374 Nickel-dependent hydrogenase CFSAN000658_RS01950 PF03916 Polysulphide reductase, NrfD CFSAN000658_RS01955 PF13247 4Fe-4S dicluster domain CFSAN000658_RS01960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFSAN000658_RS01960 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CFSAN000658_RS01965 PF11115 Protein of unknown function (DUF2623) CFSAN000658_RS01970 PF00672 HAMP domain CFSAN000658_RS01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS01970 PF02203 Tar ligand binding domain homologue CFSAN000658_RS01975 PF03350 Uncharacterized protein family, UPF0114 CFSAN000658_RS02000 PF02472 Biopolymer transport protein ExbD/TolR CFSAN000658_RS02005 PF01618 MotA/TolQ/ExbB proton channel family CFSAN000658_RS02015 PF01053 Cys/Met metabolism PLP-dependent enzyme CFSAN000658_RS02020 PF09335 SNARE associated Golgi protein CFSAN000658_RS02025 PF06719 AraC-type transcriptional regulator N-terminus CFSAN000658_RS02025 PF12833 Helix-turn-helix domain CFSAN000658_RS02030 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS02035 PF00248 Aldo/keto reductase family CFSAN000658_RS02040 PF00939 Sodium:sulfate symporter transmembrane region CFSAN000658_RS02050 PF11842 Domain of unknown function (DUF3362) CFSAN000658_RS02050 PF04055 Radical SAM superfamily CFSAN000658_RS02050 PF08497 Radical SAM N-terminal CFSAN000658_RS02075 PF00394 Multicopper oxidase CFSAN000658_RS02075 PF07731 Multicopper oxidase CFSAN000658_RS02075 PF07732 Multicopper oxidase CFSAN000658_RS02080 PF01553 Acyltransferase CFSAN000658_RS02085 PF03989 DNA gyrase C-terminal domain, beta-propeller CFSAN000658_RS02085 PF00521 DNA gyrase/topoisomerase IV, subunit A CFSAN000658_RS02090 PF06445 GyrI-like small molecule binding domain CFSAN000658_RS02095 PF04076 Bacterial OB fold (BOF) protein CFSAN000658_RS02100 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS02100 PF00072 Response regulator receiver domain CFSAN000658_RS02105 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS02105 PF08521 Two-component sensor kinase N-terminal CFSAN000658_RS02110 PF02525 Flavodoxin-like fold CFSAN000658_RS02115 PF03992 Antibiotic biosynthesis monooxygenase CFSAN000658_RS02120 PF00204 DNA gyrase B CFSAN000658_RS02120 PF01751 Toprim domain CFSAN000658_RS02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS02120 PF00986 DNA gyrase B subunit, carboxyl terminus CFSAN000658_RS02125 PF05728 Uncharacterised protein family (UPF0227) CFSAN000658_RS02130 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS02135 PF06853 Protein of unknown function (DUF1249) CFSAN000658_RS02140 PF00293 NUDIX domain CFSAN000658_RS02145 PF02321 Outer membrane efflux protein CFSAN000658_RS02150 PF06693 Protein of unknown function (DUF1190) CFSAN000658_RS02155 PF03738 Glutathionylspermidine synthase preATP-grasp CFSAN000658_RS02160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CFSAN000658_RS02165 PF02535 ZIP Zinc transporter CFSAN000658_RS02175 PF05935 Arylsulfotransferase (ASST) CFSAN000658_RS02175 PF17425 Arylsulfotransferase Ig-like domain CFSAN000658_RS02180 PF01323 DSBA-like thioredoxin domain CFSAN000658_RS02185 PF02600 Disulfide bond formation protein DsbB CFSAN000658_RS02190 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFSAN000658_RS02195 PF04380 Membrane fusogenic activity CFSAN000658_RS02200 PF08971 Glycogen synthesis protein CFSAN000658_RS02205 PF07290 Protein of unknown function (DUF1449) CFSAN000658_RS02210 PF15975 Flotillin CFSAN000658_RS02210 PF01145 SPFH domain / Band 7 family CFSAN000658_RS02215 PF01467 Cytidylyltransferase-like CFSAN000658_RS02215 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS02220 PF03710 Glutamate-ammonia ligase adenylyltransferase CFSAN000658_RS02220 PF08335 GlnD PII-uridylyltransferase CFSAN000658_RS02225 PF01928 CYTH domain CFSAN000658_RS02230 PF08239 Bacterial SH3 domain CFSAN000658_RS02235 PF01966 HD domain CFSAN000658_RS02235 PF12627 Probable RNA and SrmB- binding site of polymerase A CFSAN000658_RS02235 PF01743 Poly A polymerase head domain CFSAN000658_RS02240 PF02673 Bacitracin resistance protein BacA CFSAN000658_RS02245 PF02152 Dihydroneopterin aldolase CFSAN000658_RS02250 PF02660 Glycerol-3-phosphate acyltransferase CFSAN000658_RS02260 PF01165 Ribosomal protein S21 CFSAN000658_RS02265 PF01807 CHC2 zinc finger CFSAN000658_RS02265 PF08275 DNA primase catalytic core, N-terminal domain CFSAN000658_RS02265 PF08278 DNA primase DnaG DnaB-binding CFSAN000658_RS02265 PF10410 DnaB-helicase binding domain of primase CFSAN000658_RS02270 PF04539 Sigma-70 region 3 CFSAN000658_RS02270 PF04542 Sigma-70 region 2 CFSAN000658_RS02270 PF04545 Sigma-70, region 4 CFSAN000658_RS02270 PF04546 Sigma-70, non-essential region CFSAN000658_RS02270 PF03979 Sigma-70 factor, region 1.1 CFSAN000658_RS02270 PF00140 Sigma-70 factor, region 1.2 CFSAN000658_RS02280 PF03167 Uracil DNA glycosylase superfamily CFSAN000658_RS02290 PF04954 Siderophore-interacting protein CFSAN000658_RS02290 PF08021 Siderophore-interacting FAD-binding domain CFSAN000658_RS02295 PF03551 Transcriptional regulator PadR-like family CFSAN000658_RS02300 PF00672 HAMP domain CFSAN000658_RS02300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS02300 PF02203 Tar ligand binding domain homologue CFSAN000658_RS02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS02305 PF08447 PAS fold CFSAN000658_RS02310 PF00202 Aminotransferase class-III CFSAN000658_RS02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS02315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFSAN000658_RS02320 PF05175 Methyltransferase small domain CFSAN000658_RS02325 PF01863 Protein of unknown function DUF45 CFSAN000658_RS02330 PF02698 DUF218 domain CFSAN000658_RS02335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFSAN000658_RS02340 PF03741 Integral membrane protein TerC family CFSAN000658_RS02345 PF00375 Sodium:dicarboxylate symporter family CFSAN000658_RS02350 PF09335 SNARE associated Golgi protein CFSAN000658_RS02355 PF13721 SecD export protein N-terminal TM region CFSAN000658_RS02360 PF06476 Protein of unknown function (DUF1090) CFSAN000658_RS02365 PF05957 Bacterial protein of unknown function (DUF883) CFSAN000658_RS02370 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CFSAN000658_RS02375 PF13997 YqjK-like protein CFSAN000658_RS02380 PF07681 DoxX CFSAN000658_RS02385 PF13409 Glutathione S-transferase, N-terminal domain CFSAN000658_RS02390 PF05656 Protein of unknown function (DUF805) CFSAN000658_RS02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS02395 PF03466 LysR substrate binding domain CFSAN000658_RS02400 PF02678 Pirin CFSAN000658_RS02400 PF17954 Quercetinase C-terminal cupin domain CFSAN000658_RS02410 PF03313 Serine dehydratase alpha chain CFSAN000658_RS02420 PF03315 Serine dehydratase beta chain CFSAN000658_RS02420 PF03313 Serine dehydratase alpha chain CFSAN000658_RS02425 PF02901 Pyruvate formate lyase-like CFSAN000658_RS02425 PF01228 Glycine radical CFSAN000658_RS02430 PF00871 Acetokinase family CFSAN000658_RS02435 PF03222 Tryptophan/tyrosine permease family CFSAN000658_RS02440 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS02445 PF03466 LysR substrate binding domain CFSAN000658_RS02450 PF02595 Glycerate kinase family CFSAN000658_RS02455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFSAN000658_RS02455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFSAN000658_RS02460 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS02465 PF08666 SAF domain CFSAN000658_RS02465 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CFSAN000658_RS02470 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS02475 PF00455 DeoR C terminal sensor domain CFSAN000658_RS02475 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS02480 PF01116 Fructose-bisphosphate aldolase class-II CFSAN000658_RS02485 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS02490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS02490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS02495 PF00381 PTS HPr component phosphorylation site CFSAN000658_RS02495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS02500 PF08013 Tagatose 6 phosphate kinase CFSAN000658_RS02505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS02510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS02515 PF03611 PTS system sugar-specific permease component CFSAN000658_RS02520 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS02520 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS02525 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS02530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS02535 PF04348 LppC putative lipoprotein CFSAN000658_RS02540 PF02021 Uncharacterised protein family UPF0102 CFSAN000658_RS02545 PF13580 SIS domain CFSAN000658_RS02550 PF04972 BON domain CFSAN000658_RS02555 PF13460 NAD(P)H-binding CFSAN000658_RS02560 PF01965 DJ-1/PfpI family CFSAN000658_RS02570 PF01541 GIY-YIG catalytic domain CFSAN000658_RS02575 PF13508 Acetyltransferase (GNAT) domain CFSAN000658_RS02580 PF02036 SCP-2 sterol transfer family CFSAN000658_RS02585 PF01136 Peptidase family U32 CFSAN000658_RS02590 PF01136 Peptidase family U32 CFSAN000658_RS02595 PF00296 Luciferase-like monooxygenase CFSAN000658_RS02600 PF03222 Tryptophan/tyrosine permease family CFSAN000658_RS02605 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS02605 PF12343 Cold shock protein DEAD box A CFSAN000658_RS02605 PF00270 DEAD/DEAH box helicase CFSAN000658_RS02605 PF03880 DbpA RNA binding domain CFSAN000658_RS02610 PF07719 Tetratricopeptide repeat CFSAN000658_RS02610 PF13181 Tetratricopeptide repeat CFSAN000658_RS02615 PF00575 S1 RNA binding domain CFSAN000658_RS02615 PF03725 3' exoribonuclease family, domain 2 CFSAN000658_RS02615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFSAN000658_RS02615 PF00013 KH domain CFSAN000658_RS02615 PF01138 3' exoribonuclease family, domain 1 CFSAN000658_RS02620 PF00312 Ribosomal protein S15 CFSAN000658_RS02625 PF01509 TruB family pseudouridylate synthase (N terminal domain) CFSAN000658_RS02625 PF16198 tRNA pseudouridylate synthase B C-terminal domain CFSAN000658_RS02625 PF09157 Pseudouridine synthase II TruB, C-terminal CFSAN000658_RS02630 PF02033 Ribosome-binding factor A CFSAN000658_RS02635 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS02635 PF08364 Bacterial translation initiation factor IF-2 associated region CFSAN000658_RS02635 PF11987 Translation-initiation factor 2 CFSAN000658_RS02635 PF04760 Translation initiation factor IF-2, N-terminal region CFSAN000658_RS02640 PF13184 NusA-like KH domain CFSAN000658_RS02640 PF08529 NusA N-terminal domain CFSAN000658_RS02645 PF02576 RimP N-terminal domain CFSAN000658_RS02645 PF17384 RimP C-terminal SH3 domain CFSAN000658_RS02655 PF00764 Arginosuccinate synthase CFSAN000658_RS02660 PF13333 Integrase core domain CFSAN000658_RS02660 PF00665 Integrase core domain CFSAN000658_RS02660 PF13276 HTH-like domain CFSAN000658_RS02675 PF03840 Preprotein translocase SecG subunit CFSAN000658_RS02680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFSAN000658_RS02680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFSAN000658_RS02680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFSAN000658_RS02680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFSAN000658_RS02685 PF00809 Pterin binding enzyme CFSAN000658_RS02690 PF17862 AAA+ lid domain CFSAN000658_RS02690 PF06480 FtsH Extracellular CFSAN000658_RS02690 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS02690 PF01434 Peptidase family M41 CFSAN000658_RS02695 PF01728 FtsJ-like methyltransferase CFSAN000658_RS02700 PF01985 CRS1 / YhbY (CRM) domain CFSAN000658_RS02705 PF03449 Transcription elongation factor, N-terminal CFSAN000658_RS02705 PF01272 Transcription elongation factor, GreA/GreB, C-term CFSAN000658_RS02715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CFSAN000658_RS02720 PF01926 50S ribosome-binding GTPase CFSAN000658_RS02720 PF01018 GTP1/OBG CFSAN000658_RS02725 PF00892 EamA-like transporter family CFSAN000658_RS02730 PF01016 Ribosomal L27 protein CFSAN000658_RS02735 PF00829 Ribosomal prokaryotic L21 protein CFSAN000658_RS02740 PF00348 Polyprenyl synthetase CFSAN000658_RS02745 PF13693 Winged helix-turn-helix DNA-binding CFSAN000658_RS02750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFSAN000658_RS02755 PF01722 BolA-like protein CFSAN000658_RS02760 PF13466 STAS domain CFSAN000658_RS02765 PF05494 MlaC protein CFSAN000658_RS02770 PF02470 MlaD protein CFSAN000658_RS02775 PF02405 Permease MlaE CFSAN000658_RS02780 PF00005 ABC transporter CFSAN000658_RS02785 PF01699 Sodium/calcium exchanger protein CFSAN000658_RS02790 PF00571 CBS domain CFSAN000658_RS02790 PF01380 SIS domain CFSAN000658_RS02800 PF06835 Lipopolysaccharide-assembly, LptC-related CFSAN000658_RS02805 PF03968 OstA-like protein CFSAN000658_RS02810 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFSAN000658_RS02810 PF00005 ABC transporter CFSAN000658_RS02815 PF00309 Sigma-54 factor, Activator interacting domain (AID) CFSAN000658_RS02815 PF04963 Sigma-54 factor, core binding domain CFSAN000658_RS02815 PF04552 Sigma-54, DNA binding domain CFSAN000658_RS02820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFSAN000658_RS02825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS02830 PF03668 P-loop ATPase protein family CFSAN000658_RS02835 PF00381 PTS HPr component phosphorylation site CFSAN000658_RS02840 PF10707 PhoP regulatory network protein YrbL CFSAN000658_RS02845 PF00912 Transglycosylase CFSAN000658_RS02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS02855 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS02855 PF18415 Histidine kinase receptor ArcB trans-membrane domain CFSAN000658_RS02855 PF00989 PAS fold CFSAN000658_RS02855 PF01627 Hpt domain CFSAN000658_RS02855 PF00072 Response regulator receiver domain CFSAN000658_RS02860 PF16199 Radical_SAM C-terminal domain CFSAN000658_RS02860 PF04055 Radical SAM superfamily CFSAN000658_RS02870 PF04898 Glutamate synthase central domain CFSAN000658_RS02870 PF00310 Glutamine amidotransferases class-II CFSAN000658_RS02870 PF01645 Conserved region in glutamate synthase CFSAN000658_RS02870 PF01493 GXGXG motif CFSAN000658_RS02875 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFSAN000658_RS02875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS02880 PF17761 DUF1016 N-terminal domain CFSAN000658_RS02880 PF06250 YhcG PDDEXK nuclease domain CFSAN000658_RS02885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFSAN000658_RS02890 PF07969 Amidohydrolase family CFSAN000658_RS02895 PF04074 YhcH/YjgK/YiaL CFSAN000658_RS02900 PF00480 ROK family CFSAN000658_RS02905 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CFSAN000658_RS02910 PF07690 Major Facilitator Superfamily CFSAN000658_RS02915 PF00701 Dihydrodipicolinate synthetase family CFSAN000658_RS02920 PF07729 FCD domain CFSAN000658_RS02920 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS02925 PF04386 Stringent starvation protein B CFSAN000658_RS02930 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS02930 PF00043 Glutathione S-transferase, C-terminal domain CFSAN000658_RS02935 PF00380 Ribosomal protein S9/S16 CFSAN000658_RS02940 PF00572 Ribosomal protein L13 CFSAN000658_RS02945 PF03969 AFG1-like ATPase CFSAN000658_RS02950 PF06295 Protein of unknown function (DUF1043) CFSAN000658_RS02955 PF00595 PDZ domain CFSAN000658_RS02955 PF13180 PDZ domain CFSAN000658_RS02960 PF13180 PDZ domain CFSAN000658_RS02965 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CFSAN000658_RS02970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CFSAN000658_RS02975 PF00364 Biotin-requiring enzyme CFSAN000658_RS02975 PF00682 HMGL-like CFSAN000658_RS02975 PF02436 Conserved carboxylase domain CFSAN000658_RS02980 PF04277 Oxaloacetate decarboxylase, gamma chain CFSAN000658_RS02985 PF05683 Fumarase C-terminus CFSAN000658_RS02990 PF05681 Fumarate hydratase (Fumerase) CFSAN000658_RS02995 PF00939 Sodium:sulfate symporter transmembrane region CFSAN000658_RS03005 PF07702 UTRA domain CFSAN000658_RS03005 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS03010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFSAN000658_RS03010 PF00056 lactate/malate dehydrogenase, NAD binding domain CFSAN000658_RS03015 PF01316 Arginine repressor, DNA binding domain CFSAN000658_RS03015 PF02863 Arginine repressor, C-terminal domain CFSAN000658_RS03020 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS03025 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS03030 PF01337 Barstar (barnase inhibitor) CFSAN000658_RS03035 PF04632 Fusaric acid resistance protein family CFSAN000658_RS03040 PF13533 Biotin-lipoyl like CFSAN000658_RS03045 PF07869 Protein of unknown function (DUF1656) CFSAN000658_RS03050 PF03466 LysR substrate binding domain CFSAN000658_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS03055 PF01523 Putative modulator of DNA gyrase CFSAN000658_RS03060 PF13116 Protein of unknown function CFSAN000658_RS03060 PF13502 AsmA-like C-terminal region CFSAN000658_RS03065 PF10150 Ribonuclease E/G family CFSAN000658_RS03065 PF00575 S1 RNA binding domain CFSAN000658_RS03070 PF02545 Maf-like protein CFSAN000658_RS03075 PF04093 rod shape-determining protein MreD CFSAN000658_RS03080 PF04085 rod shape-determining protein MreC CFSAN000658_RS03095 PF17157 Gammaproteobacterial periplasmic sensor domain CFSAN000658_RS03095 PF00563 EAL domain CFSAN000658_RS03095 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS03100 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS03100 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS03105 PF00174 Oxidoreductase molybdopterin binding domain CFSAN000658_RS03110 PF01794 Ferric reductase like transmembrane component CFSAN000658_RS03115 PF00364 Biotin-requiring enzyme CFSAN000658_RS03120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFSAN000658_RS03120 PF00289 Biotin carboxylase, N-terminal domain CFSAN000658_RS03120 PF02785 Biotin carboxylase C-terminal domain CFSAN000658_RS03125 PF06196 Protein of unknown function (DUF997) CFSAN000658_RS03130 PF00474 Sodium:solute symporter family CFSAN000658_RS03140 PF01207 Dihydrouridine synthase (Dus) CFSAN000658_RS03145 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS03150 PF01555 DNA methylase CFSAN000658_RS03155 PF10831 Protein of unknown function (DUF2556) CFSAN000658_RS03160 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS03160 PF03707 Bacterial signalling protein N terminal repeat CFSAN000658_RS03160 PF00563 EAL domain CFSAN000658_RS03165 PF08361 MAATS-type transcriptional repressor, C-terminal region CFSAN000658_RS03165 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS03170 PF00529 HlyD membrane-fusion protein of T1SS CFSAN000658_RS03170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS03175 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS03215 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS03220 PF07369 Protein of unknown function (DUF1488) CFSAN000658_RS03225 PF08501 Shikimate dehydrogenase substrate binding domain CFSAN000658_RS03225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFSAN000658_RS03225 PF01488 Shikimate / quinate 5-dehydrogenase CFSAN000658_RS03230 PF01300 Telomere recombination CFSAN000658_RS03235 PF01396 Topoisomerase DNA binding C4 zinc finger CFSAN000658_RS03240 PF04361 Protein of unknown function (DUF494) CFSAN000658_RS03245 PF17782 DprA winged helix domain CFSAN000658_RS03245 PF02481 DNA recombination-mediator protein A CFSAN000658_RS03250 PF01327 Polypeptide deformylase CFSAN000658_RS03255 PF02911 Formyl transferase, C-terminal domain CFSAN000658_RS03255 PF00551 Formyl transferase CFSAN000658_RS03260 PF01189 16S rRNA methyltransferase RsmB/F CFSAN000658_RS03260 PF01029 NusB family CFSAN000658_RS03265 PF02254 TrkA-N domain CFSAN000658_RS03265 PF02080 TrkA-C domain CFSAN000658_RS03270 PF01741 Large-conductance mechanosensitive channel, MscL CFSAN000658_RS03275 PF03889 Alternative ribosome-rescue factor A CFSAN000658_RS03280 PF13411 MerR HTH family regulatory protein CFSAN000658_RS03285 PF09350 Domain of unknown function (DUF1992) CFSAN000658_RS03290 PF01196 Ribosomal protein L17 CFSAN000658_RS03295 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CFSAN000658_RS03295 PF01000 RNA polymerase Rpb3/RpoA insert domain CFSAN000658_RS03295 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CFSAN000658_RS03300 PF01479 S4 domain CFSAN000658_RS03300 PF00163 Ribosomal protein S4/S9 N-terminal domain CFSAN000658_RS03305 PF00411 Ribosomal protein S11 CFSAN000658_RS03310 PF00416 Ribosomal protein S13/S18 CFSAN000658_RS03315 PF00444 Ribosomal protein L36 CFSAN000658_RS03320 PF00344 SecY translocase CFSAN000658_RS03325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CFSAN000658_RS03330 PF00327 Ribosomal protein L30p/L7e CFSAN000658_RS03335 PF00333 Ribosomal protein S5, N-terminal domain CFSAN000658_RS03335 PF03719 Ribosomal protein S5, C-terminal domain CFSAN000658_RS03340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CFSAN000658_RS03345 PF00347 Ribosomal protein L6 CFSAN000658_RS03350 PF00410 Ribosomal protein S8 CFSAN000658_RS03355 PF00253 Ribosomal protein S14p/S29e CFSAN000658_RS03360 PF00281 Ribosomal protein L5 CFSAN000658_RS03360 PF00673 ribosomal L5P family C-terminus CFSAN000658_RS03365 PF00467 KOW motif CFSAN000658_RS03365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CFSAN000658_RS03370 PF00238 Ribosomal protein L14p/L23e CFSAN000658_RS03375 PF00366 Ribosomal protein S17 CFSAN000658_RS03380 PF00831 Ribosomal L29 protein CFSAN000658_RS03385 PF00252 Ribosomal protein L16p/L10e CFSAN000658_RS03390 PF00189 Ribosomal protein S3, C-terminal domain CFSAN000658_RS03390 PF07650 KH domain CFSAN000658_RS03395 PF00237 Ribosomal protein L22p/L17e CFSAN000658_RS03400 PF00203 Ribosomal protein S19 CFSAN000658_RS03405 PF00181 Ribosomal Proteins L2, RNA binding domain CFSAN000658_RS03405 PF03947 Ribosomal Proteins L2, C-terminal domain CFSAN000658_RS03410 PF00276 Ribosomal protein L23 CFSAN000658_RS03415 PF00573 Ribosomal protein L4/L1 family CFSAN000658_RS03420 PF00297 Ribosomal protein L3 CFSAN000658_RS03425 PF00338 Ribosomal protein S10p/S20e CFSAN000658_RS03430 PF01478 Type IV leader peptidase family CFSAN000658_RS03435 PF00210 Ferritin-like domain CFSAN000658_RS03440 PF04324 BFD-like [2Fe-2S] binding domain CFSAN000658_RS03445 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS03445 PF03143 Elongation factor Tu C-terminal domain CFSAN000658_RS03445 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS03450 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS03450 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS03450 PF03764 Elongation factor G, domain IV CFSAN000658_RS03450 PF00679 Elongation factor G C-terminus CFSAN000658_RS03450 PF14492 Elongation Factor G, domain II CFSAN000658_RS03455 PF00177 Ribosomal protein S7p/S5e CFSAN000658_RS03460 PF00164 Ribosomal protein S12/S23 CFSAN000658_RS03465 PF04077 DsrH like protein CFSAN000658_RS03470 PF02635 DsrE/DsrF-like family CFSAN000658_RS03475 PF02635 DsrE/DsrF-like family CFSAN000658_RS03480 PF13309 HTH domain CFSAN000658_RS03480 PF08348 YheO-like PAS domain CFSAN000658_RS03485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CFSAN000658_RS03485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFSAN000658_RS03490 PF04102 SlyX CFSAN000658_RS03495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFSAN000658_RS03500 PF09526 Probable metal-binding protein (DUF2387) CFSAN000658_RS03505 PF00999 Sodium/hydrogen exchanger family CFSAN000658_RS03505 PF02254 TrkA-N domain CFSAN000658_RS03510 PF02525 Flavodoxin-like fold CFSAN000658_RS03515 PF00005 ABC transporter CFSAN000658_RS03515 PF12848 ABC transporter CFSAN000658_RS03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS03520 PF03466 LysR substrate binding domain CFSAN000658_RS03525 PF08803 Putative mono-oxygenase ydhR CFSAN000658_RS03530 PF00561 alpha/beta hydrolase fold CFSAN000658_RS03535 PF06794 Uncharacterised protein family (UPF0270) CFSAN000658_RS03540 PF00485 Phosphoribulokinase / Uridine kinase family CFSAN000658_RS03545 PF02566 OsmC-like protein CFSAN000658_RS03550 PF00027 Cyclic nucleotide-binding domain CFSAN000658_RS03550 PF13545 Crp-like helix-turn-helix domain CFSAN000658_RS03555 PF12805 FUSC-like inner membrane protein yccS CFSAN000658_RS03560 PF00202 Aminotransferase class-III CFSAN000658_RS03565 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS03570 PF02661 Fic/DOC family CFSAN000658_RS03575 PF10832 Protein of unknown function (DUF2559) CFSAN000658_RS03580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFSAN000658_RS03585 PF07690 Major Facilitator Superfamily CFSAN000658_RS03590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFSAN000658_RS03590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS03590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFSAN000658_RS03590 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFSAN000658_RS03590 PF04324 BFD-like [2Fe-2S] binding domain CFSAN000658_RS03595 PF13806 Rieske-like [2Fe-2S] domain CFSAN000658_RS03600 PF01226 Formate/nitrite transporter CFSAN000658_RS03605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS03605 PF14824 Sirohaem biosynthesis protein central CFSAN000658_RS03605 PF10414 Sirohaem synthase dimerisation region CFSAN000658_RS03615 PF13978 Protein of unknown function (DUF4223) CFSAN000658_RS03620 PF00579 tRNA synthetases class I (W and Y) CFSAN000658_RS03625 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS03630 PF00834 Ribulose-phosphate 3 epimerase family CFSAN000658_RS03635 PF02086 D12 class N6 adenine-specific DNA methyltransferase CFSAN000658_RS03640 PF05036 Sporulation related domain CFSAN000658_RS03645 PF01761 3-dehydroquinate synthase CFSAN000658_RS03650 PF01202 Shikimate kinase CFSAN000658_RS03655 PF03958 Bacterial type II/III secretion system short domain CFSAN000658_RS03655 PF00263 Bacterial type II and III secretion system protein CFSAN000658_RS03660 PF10748 DNA utilization proteins HofP CFSAN000658_RS03670 PF05137 Fimbrial assembly protein (PilN) CFSAN000658_RS03680 PF17092 Penicillin-binding protein OB-like domain CFSAN000658_RS03680 PF00912 Transglycosylase CFSAN000658_RS03680 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS03685 PF00293 NUDIX domain CFSAN000658_RS03690 PF07095 Intracellular growth attenuator protein IgaA CFSAN000658_RS03695 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS03700 PF01479 S4 domain CFSAN000658_RS03705 PF01430 Hsp33 protein CFSAN000658_RS03710 PF13687 Domain of unknown function (DUF4153) CFSAN000658_RS03715 PF01293 Phosphoenolpyruvate carboxykinase CFSAN000658_RS03720 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS03720 PF00672 HAMP domain CFSAN000658_RS03725 PF00072 Response regulator receiver domain CFSAN000658_RS03725 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS03730 PF03449 Transcription elongation factor, N-terminal CFSAN000658_RS03730 PF01272 Transcription elongation factor, GreA/GreB, C-term CFSAN000658_RS03735 PF09371 Tex-like protein N-terminal domain CFSAN000658_RS03735 PF16921 Tex protein YqgF-like domain CFSAN000658_RS03735 PF00575 S1 RNA binding domain CFSAN000658_RS03735 PF17674 HHH domain CFSAN000658_RS03740 PF04023 FeoA domain CFSAN000658_RS03745 PF02421 Ferrous iron transport protein B CFSAN000658_RS03745 PF07670 Nucleoside recognition CFSAN000658_RS03745 PF07664 Ferrous iron transport protein B C terminus CFSAN000658_RS03745 PF17910 FeoB cytosolic helical domain CFSAN000658_RS03750 PF09012 FeoC like transcriptional regulator CFSAN000658_RS03755 PF04754 Putative transposase, YhgA-like CFSAN000658_RS03760 PF00561 alpha/beta hydrolase fold CFSAN000658_RS03765 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS03770 PF01106 NifU-like domain CFSAN000658_RS03770 PF01521 Iron-sulphur cluster biosynthesis CFSAN000658_RS03775 PF02447 GntP family permease CFSAN000658_RS03780 PF02446 4-alpha-glucanotransferase CFSAN000658_RS03785 PF00343 Carbohydrate phosphorylase CFSAN000658_RS03790 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS03790 PF17874 MalT-like TPR region CFSAN000658_RS03795 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS03795 PF00455 DeoR C terminal sensor domain CFSAN000658_RS03800 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CFSAN000658_RS03800 PF01694 Rhomboid family CFSAN000658_RS03805 PF00581 Rhodanese-like domain CFSAN000658_RS03810 PF01266 FAD dependent oxidoreductase CFSAN000658_RS03810 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFSAN000658_RS03815 PF00343 Carbohydrate phosphorylase CFSAN000658_RS03820 PF00534 Glycosyl transferases group 1 CFSAN000658_RS03820 PF08323 Starch synthase catalytic domain CFSAN000658_RS03825 PF00483 Nucleotidyl transferase CFSAN000658_RS03830 PF18390 Glycogen debranching enzyme C-terminal domain CFSAN000658_RS03830 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS03830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFSAN000658_RS03835 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS03835 PF02806 Alpha amylase, C-terminal all-beta domain CFSAN000658_RS03835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFSAN000658_RS03840 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS03840 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFSAN000658_RS03845 PF02447 GntP family permease CFSAN000658_RS03850 PF01202 Shikimate kinase CFSAN000658_RS03855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFSAN000658_RS03855 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS03860 PF17954 Quercetinase C-terminal cupin domain CFSAN000658_RS03860 PF02678 Pirin CFSAN000658_RS03865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFSAN000658_RS03865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFSAN000658_RS03870 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS03875 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS03890 PF02126 Phosphotriesterase family CFSAN000658_RS03900 PF10956 Protein of unknown function (DUF2756) CFSAN000658_RS03905 PF03009 Glycerophosphoryl diester phosphodiesterase family CFSAN000658_RS03910 PF00005 ABC transporter CFSAN000658_RS03910 PF17912 MalK OB fold domain CFSAN000658_RS03915 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS03920 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS03925 PF13416 Bacterial extracellular solute-binding protein CFSAN000658_RS03935 PF00005 ABC transporter CFSAN000658_RS03940 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFSAN000658_RS03940 PF00005 ABC transporter CFSAN000658_RS03945 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS03945 PF11862 Domain of unknown function (DUF3382) CFSAN000658_RS03950 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS03955 PF13458 Periplasmic binding protein CFSAN000658_RS03960 PF12568 Acetyltransferase (GNAT) domain, PanZ CFSAN000658_RS03970 PF13458 Periplasmic binding protein CFSAN000658_RS03975 PF04542 Sigma-70 region 2 CFSAN000658_RS03975 PF04545 Sigma-70, region 4 CFSAN000658_RS03980 PF18075 FtsX extracellular domain CFSAN000658_RS03980 PF02687 FtsX-like permease family CFSAN000658_RS03985 PF00005 ABC transporter CFSAN000658_RS03990 PF00448 SRP54-type protein, GTPase domain CFSAN000658_RS03990 PF02881 SRP54-type protein, helical bundle domain CFSAN000658_RS04000 PF06611 Protein of unknown function (DUF1145) CFSAN000658_RS04005 PF10694 Protein of unknown function (DUF2500) CFSAN000658_RS04010 PF07947 YhhN family CFSAN000658_RS04015 PF00403 Heavy-metal-associated domain CFSAN000658_RS04020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS04020 PF02203 Tar ligand binding domain homologue CFSAN000658_RS04020 PF00672 HAMP domain CFSAN000658_RS04025 PF01206 Sulfurtransferase TusA CFSAN000658_RS04030 PF02592 Putative vitamin uptake transporter CFSAN000658_RS04035 PF08786 DcrB CFSAN000658_RS04040 PF07690 Major Facilitator Superfamily CFSAN000658_RS04045 PF01594 AI-2E family transporter CFSAN000658_RS04050 PF01648 4'-phosphopantetheinyl transferase superfamily CFSAN000658_RS04055 PF01402 Ribbon-helix-helix protein, copG family CFSAN000658_RS04055 PF08753 NikR C terminal nickel binding domain CFSAN000658_RS04065 PF00005 ABC transporter CFSAN000658_RS04070 PF13533 Biotin-lipoyl like CFSAN000658_RS04080 PF01384 Phosphate transporter family CFSAN000658_RS04085 PF10625 Universal stress protein B (UspB) CFSAN000658_RS04090 PF00582 Universal stress protein family CFSAN000658_RS04095 PF00854 POT family CFSAN000658_RS04100 PF04445 Putative SAM-dependent methyltransferase CFSAN000658_RS04105 PF01432 Peptidase family M3 CFSAN000658_RS04110 PF01569 PAP2 superfamily CFSAN000658_RS04115 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CFSAN000658_RS04120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFSAN000658_RS04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS04125 PF17763 Glutaminase/Asparaginase C-terminal domain CFSAN000658_RS04125 PF00710 Asparaginase, N-terminal CFSAN000658_RS04130 PF03605 Anaerobic c4-dicarboxylate membrane transporter CFSAN000658_RS04135 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS04140 PF01380 SIS domain CFSAN000658_RS04145 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS04145 PF07702 UTRA domain CFSAN000658_RS04150 PF01204 Trehalase CFSAN000658_RS04165 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS04170 PF03466 LysR substrate binding domain CFSAN000658_RS04175 PF03631 Virulence factor BrkB CFSAN000658_RS04180 PF00083 Sugar (and other) transporter CFSAN000658_RS04180 PF07690 Major Facilitator Superfamily CFSAN000658_RS04185 PF05170 AsmA family CFSAN000658_RS04190 PF00563 EAL domain CFSAN000658_RS04195 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS04200 PF00675 Insulinase (Peptidase family M16) CFSAN000658_RS04200 PF05193 Peptidase M16 inactive domain CFSAN000658_RS04205 PF00375 Sodium:dicarboxylate symporter family CFSAN000658_RS04210 PF17154 Gammaproteobacterial periplasmic sensor domain CFSAN000658_RS04210 PF00672 HAMP domain CFSAN000658_RS04210 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS04210 PF00563 EAL domain CFSAN000658_RS04215 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CFSAN000658_RS04215 PF13176 Tetratricopeptide repeat CFSAN000658_RS04220 PF01270 Glycosyl hydrolases family 8 CFSAN000658_RS04225 PF03170 Bacterial cellulose synthase subunit CFSAN000658_RS04230 PF03552 Cellulose synthase CFSAN000658_RS04230 PF00535 Glycosyl transferase family 2 CFSAN000658_RS04230 PF07238 PilZ domain CFSAN000658_RS04235 PF06564 Cellulose biosynthesis protein BcsQ CFSAN000658_RS04240 PF10945 Cellulose biosynthesis protein BcsR CFSAN000658_RS04245 PF10995 Cellulose biosynthesis GIL CFSAN000658_RS04250 PF11120 Cellulose biosynthesis protein BcsF CFSAN000658_RS04255 PF11658 Cellulose biosynthesis protein BcsG CFSAN000658_RS04260 PF13940 Toxin Ldr, type I toxin-antitoxin system CFSAN000658_RS04265 PF01053 Cys/Met metabolism PLP-dependent enzyme CFSAN000658_RS04270 PF03222 Tryptophan/tyrosine permease family CFSAN000658_RS04275 PF00005 ABC transporter CFSAN000658_RS04275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS04280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS04280 PF00005 ABC transporter CFSAN000658_RS04285 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS04285 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS04290 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS04295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS04300 PF00860 Permease family CFSAN000658_RS04315 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CFSAN000658_RS04315 PF17191 RecG wedge domain CFSAN000658_RS04315 PF00270 DEAD/DEAH box helicase CFSAN000658_RS04320 PF13356 Arm DNA-binding domain CFSAN000658_RS04320 PF00589 Phage integrase family CFSAN000658_RS04335 PF08019 Phosphoethanolamine transferase EptA/EptB CFSAN000658_RS04335 PF00884 Sulfatase CFSAN000658_RS04340 PF03797 Autotransporter beta-domain CFSAN000658_RS04345 PF03352 Methyladenine glycosylase CFSAN000658_RS04350 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS04355 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS04355 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS04355 PF18364 Molybdopterin oxidoreductase N-terminal domain CFSAN000658_RS04360 PF00691 OmpA family CFSAN000658_RS04360 PF13488 Glycine zipper CFSAN000658_RS04365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFSAN000658_RS04365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFSAN000658_RS04370 PF11254 Protein of unknown function (DUF3053) CFSAN000658_RS04375 PF01381 Helix-turn-helix CFSAN000658_RS04380 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS04420 PF02092 Glycyl-tRNA synthetase beta subunit CFSAN000658_RS04420 PF05746 DALR anticodon binding domain CFSAN000658_RS04425 PF02091 Glycyl-tRNA synthetase alpha subunit CFSAN000658_RS04430 PF13983 YsaB-like lipoprotein CFSAN000658_RS04435 PF01757 Acyltransferase family CFSAN000658_RS04440 PF05360 yiaA/B two helix domain CFSAN000658_RS04445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS04445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS04455 PF12833 Helix-turn-helix domain CFSAN000658_RS04460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CFSAN000658_RS04470 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS04475 PF00155 Aminotransferase class I and II CFSAN000658_RS04480 PF13247 4Fe-4S dicluster domain CFSAN000658_RS04485 PF09339 IclR helix-turn-helix domain CFSAN000658_RS04485 PF01614 Bacterial transcriptional regulator CFSAN000658_RS04490 PF02615 Malate/L-lactate dehydrogenase CFSAN000658_RS04495 PF04074 YhcH/YjgK/YiaL CFSAN000658_RS04500 PF16154 Domain of unknown function (DUF4862) CFSAN000658_RS04505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFSAN000658_RS04510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFSAN000658_RS04515 PF03480 Bacterial extracellular solute-binding protein, family 7 CFSAN000658_RS04520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS04520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS04525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS04530 PF01261 Xylose isomerase-like TIM barrel CFSAN000658_RS04535 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS04545 PF07944 Beta-L-arabinofuranosidase, GH127 CFSAN000658_RS04550 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS04555 PF00480 ROK family CFSAN000658_RS04560 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS04565 PF09106 Elongation factor SelB, winged helix CFSAN000658_RS04565 PF09107 Elongation factor SelB, winged helix CFSAN000658_RS04565 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS04565 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS04570 PF12390 Selenocysteine synthase N terminal CFSAN000658_RS04570 PF03841 L-seryl-tRNA selenium transferase CFSAN000658_RS04575 PF13417 Glutathione S-transferase, N-terminal domain CFSAN000658_RS04575 PF00043 Glutathione S-transferase, C-terminal domain CFSAN000658_RS04580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS04580 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS04580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS04585 PF08125 Mannitol dehydrogenase C-terminal domain CFSAN000658_RS04585 PF01232 Mannitol dehydrogenase Rossmann domain CFSAN000658_RS04590 PF05068 Mannitol repressor CFSAN000658_RS04600 PF10928 Protein of unknown function (DUF2810) CFSAN000658_RS04605 PF11622 Protein of unknown function (DUF3251) CFSAN000658_RS04610 PF05658 Head domain of trimeric autotransporter adhesin CFSAN000658_RS04610 PF05662 Coiled stalk of trimeric autotransporter adhesin CFSAN000658_RS04610 PF03895 YadA-like membrane anchor domain CFSAN000658_RS04610 PF13018 Extended Signal Peptide of Type V secretion system CFSAN000658_RS04615 PF02652 L-lactate permease CFSAN000658_RS04620 PF07729 FCD domain CFSAN000658_RS04620 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS04625 PF01070 FMN-dependent dehydrogenase CFSAN000658_RS04630 PF00588 SpoU rRNA Methylase family CFSAN000658_RS04635 PF06426 Serine acetyltransferase, N-terminal CFSAN000658_RS04635 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS04640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CFSAN000658_RS04640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CFSAN000658_RS04645 PF02556 Preprotein translocase subunit SecB CFSAN000658_RS04650 PF00462 Glutaredoxin CFSAN000658_RS04655 PF00581 Rhodanese-like domain CFSAN000658_RS04660 PF01676 Metalloenzyme superfamily CFSAN000658_RS04660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CFSAN000658_RS04665 PF01551 Peptidase family M23 CFSAN000658_RS04670 PF04748 Divergent polysaccharide deacetylase CFSAN000658_RS04675 PF00535 Glycosyl transferase family 2 CFSAN000658_RS04680 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS04680 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS04685 PF00155 Aminotransferase class I and II CFSAN000658_RS04690 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS04695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CFSAN000658_RS04700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CFSAN000658_RS04705 PF04932 O-Antigen ligase CFSAN000658_RS04710 PF00534 Glycosyl transferases group 1 CFSAN000658_RS04720 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CFSAN000658_RS04725 PF08437 Glycosyl transferase family 8 C-terminal CFSAN000658_RS04725 PF01501 Glycosyl transferase family 8 CFSAN000658_RS04730 PF08437 Glycosyl transferase family 8 C-terminal CFSAN000658_RS04730 PF01501 Glycosyl transferase family 8 CFSAN000658_RS04735 PF13439 Glycosyltransferase Family 4 CFSAN000658_RS04735 PF00534 Glycosyl transferases group 1 CFSAN000658_RS04750 PF00534 Glycosyl transferases group 1 CFSAN000658_RS04750 PF13439 Glycosyltransferase Family 4 CFSAN000658_RS04755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CFSAN000658_RS04760 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CFSAN000658_RS04765 PF01467 Cytidylyltransferase-like CFSAN000658_RS04770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFSAN000658_RS04770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFSAN000658_RS04770 PF06827 Zinc finger found in FPG and IleRS CFSAN000658_RS04775 PF00471 Ribosomal protein L33 CFSAN000658_RS04780 PF00830 Ribosomal L28 family CFSAN000658_RS04785 PF04002 RadC-like JAB domain CFSAN000658_RS04790 PF04127 DNA / pantothenate metabolism flavoprotein CFSAN000658_RS04790 PF02441 Flavoprotein CFSAN000658_RS04795 PF00692 dUTPase CFSAN000658_RS04800 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS04805 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS04810 PF01138 3' exoribonuclease family, domain 1 CFSAN000658_RS04810 PF03725 3' exoribonuclease family, domain 2 CFSAN000658_RS04815 PF08340 Domain of unknown function (DUF1732) CFSAN000658_RS04815 PF03755 YicC-like family, N-terminal region CFSAN000658_RS04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS04820 PF03466 LysR substrate binding domain CFSAN000658_RS04830 PF03458 UPF0126 domain CFSAN000658_RS04835 PF03120 NAD-dependent DNA ligase OB-fold domain CFSAN000658_RS04835 PF01653 NAD-dependent DNA ligase adenylation domain CFSAN000658_RS04840 PF00625 Guanylate kinase CFSAN000658_RS04845 PF01192 RNA polymerase Rpb6 CFSAN000658_RS04850 PF04607 Region found in RelA / SpoT proteins CFSAN000658_RS04850 PF02824 TGS domain CFSAN000658_RS04850 PF13291 ACT domain CFSAN000658_RS04855 PF12105 SpoU, rRNA methylase, C-terminal CFSAN000658_RS04855 PF00588 SpoU rRNA Methylase family CFSAN000658_RS04860 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS04860 PF17191 RecG wedge domain CFSAN000658_RS04860 PF00270 DEAD/DEAH box helicase CFSAN000658_RS04865 PF03616 Sodium/glutamate symporter CFSAN000658_RS04870 PF00860 Permease family CFSAN000658_RS04875 PF05170 AsmA family CFSAN000658_RS04880 PF01055 Glycosyl hydrolases family 31 CFSAN000658_RS04880 PF13802 Galactose mutarotase-like CFSAN000658_RS04895 PF01527 Transposase CFSAN000658_RS04900 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS04905 PF03797 Autotransporter beta-domain CFSAN000658_RS04915 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS04920 PF00857 Isochorismatase family CFSAN000658_RS04930 PF00689 Cation transporting ATPase, C-terminus CFSAN000658_RS04930 PF00690 Cation transporter/ATPase, N-terminus CFSAN000658_RS04935 PF02308 MgtC family CFSAN000658_RS04940 PF00892 EamA-like transporter family CFSAN000658_RS04945 PF04754 Putative transposase, YhgA-like CFSAN000658_RS04950 PF07071 KDGP aldolase CFSAN000658_RS04955 PF03841 L-seryl-tRNA selenium transferase CFSAN000658_RS04960 PF03613 PTS system mannose/fructose/sorbose family IID component CFSAN000658_RS04965 PF03609 PTS system sorbose-specific iic component CFSAN000658_RS04970 PF03610 PTS system fructose IIA component CFSAN000658_RS04970 PF03830 PTS system sorbose subfamily IIB component CFSAN000658_RS04980 PF00158 Sigma-54 interaction domain CFSAN000658_RS04980 PF00874 PRD domain CFSAN000658_RS04990 PF00232 Glycosyl hydrolase family 1 CFSAN000658_RS04995 PF07690 Major Facilitator Superfamily CFSAN000658_RS05020 PF01116 Fructose-bisphosphate aldolase class-II CFSAN000658_RS05030 PF03611 PTS system sugar-specific permease component CFSAN000658_RS05035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS05040 PF05043 Mga helix-turn-helix domain CFSAN000658_RS05040 PF08279 HTH domain CFSAN000658_RS05040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS05040 PF00874 PRD domain CFSAN000658_RS05045 PF07702 UTRA domain CFSAN000658_RS05045 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS05050 PF06711 Protein of unknown function (DUF1198) CFSAN000658_RS05055 PF07690 Major Facilitator Superfamily CFSAN000658_RS05060 PF07690 Major Facilitator Superfamily CFSAN000658_RS05065 PF07730 Histidine kinase CFSAN000658_RS05065 PF05231 MASE1 CFSAN000658_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS05070 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS05070 PF00072 Response regulator receiver domain CFSAN000658_RS05080 PF07690 Major Facilitator Superfamily CFSAN000658_RS05085 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS05090 PF00455 DeoR C terminal sensor domain CFSAN000658_RS05090 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS05095 PF01842 ACT domain CFSAN000658_RS05100 PF00205 Thiamine pyrophosphate enzyme, central domain CFSAN000658_RS05100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS05100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS05105 PF08049 IlvB leader peptide CFSAN000658_RS05110 PF13939 Toxin TisB, type I toxin-antitoxin system CFSAN000658_RS05120 PF07690 Major Facilitator Superfamily CFSAN000658_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05130 PF03466 LysR substrate binding domain CFSAN000658_RS05135 PF02447 GntP family permease CFSAN000658_RS05140 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS05150 PF02656 Domain of unknown function (DUF202) CFSAN000658_RS05155 PF02656 Domain of unknown function (DUF202) CFSAN000658_RS05160 PF02080 TrkA-C domain CFSAN000658_RS05160 PF06826 Predicted Permease Membrane Region CFSAN000658_RS05165 PF00011 Hsp20/alpha crystallin family CFSAN000658_RS05170 PF00011 Hsp20/alpha crystallin family CFSAN000658_RS05175 PF07119 Protein of unknown function (DUF1375) CFSAN000658_RS05180 PF07676 WD40-like Beta Propeller Repeat CFSAN000658_RS05180 PF12566 Protein of unknown function (DUF3748) CFSAN000658_RS05185 PF03918 Cytochrome C biogenesis protein CFSAN000658_RS05190 PF08534 Redoxin CFSAN000658_RS05195 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CFSAN000658_RS05195 PF01578 Cytochrome C assembly protein CFSAN000658_RS05200 PF03100 CcmE CFSAN000658_RS05205 PF04995 Heme exporter protein D (CcmD) CFSAN000658_RS05210 PF01578 Cytochrome C assembly protein CFSAN000658_RS05215 PF03379 CcmB protein CFSAN000658_RS05220 PF00005 ABC transporter CFSAN000658_RS05225 PF03150 Di-haem cytochrome c peroxidase CFSAN000658_RS05225 PF00034 Cytochrome c CFSAN000658_RS05225 PF14376 Haem-binding domain CFSAN000658_RS05230 PF02613 Nitrate reductase delta subunit CFSAN000658_RS05235 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS05235 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS05235 PF18364 Molybdopterin oxidoreductase N-terminal domain CFSAN000658_RS05240 PF03264 NapC/NirT cytochrome c family, N-terminal region CFSAN000658_RS05245 PF00072 Response regulator receiver domain CFSAN000658_RS05245 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS05250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFSAN000658_RS05255 PF01627 Hpt domain CFSAN000658_RS05255 PF00072 Response regulator receiver domain CFSAN000658_RS05255 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS05255 PF00672 HAMP domain CFSAN000658_RS05280 PF07690 Major Facilitator Superfamily CFSAN000658_RS05285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFSAN000658_RS05285 PF13378 Enolase C-terminal domain-like CFSAN000658_RS05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05290 PF03466 LysR substrate binding domain CFSAN000658_RS05295 PF18053 DNA gyrase B subunit insert domain CFSAN000658_RS05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS05295 PF01751 Toprim domain CFSAN000658_RS05295 PF00986 DNA gyrase B subunit, carboxyl terminus CFSAN000658_RS05295 PF00204 DNA gyrase B CFSAN000658_RS05300 PF02463 RecF/RecN/SMC N terminal domain CFSAN000658_RS05305 PF00712 DNA polymerase III beta subunit, N-terminal domain CFSAN000658_RS05305 PF02768 DNA polymerase III beta subunit, C-terminal domain CFSAN000658_RS05305 PF02767 DNA polymerase III beta subunit, central domain CFSAN000658_RS05310 PF11638 DnaA N-terminal domain CFSAN000658_RS05310 PF08299 Bacterial dnaA protein helix-turn-helix CFSAN000658_RS05310 PF00308 Bacterial dnaA protein CFSAN000658_RS05315 PF00468 Ribosomal protein L34 CFSAN000658_RS05320 PF00825 Ribonuclease P CFSAN000658_RS05325 PF01809 Putative membrane protein insertion efficiency factor CFSAN000658_RS05330 PF02096 60Kd inner membrane protein CFSAN000658_RS05330 PF14849 YidC periplasmic domain CFSAN000658_RS05335 PF12631 MnmE helical domain CFSAN000658_RS05335 PF01926 50S ribosome-binding GTPase CFSAN000658_RS05335 PF10396 GTP-binding protein TrmE N-terminus CFSAN000658_RS05340 PF07690 Major Facilitator Superfamily CFSAN000658_RS05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05345 PF03466 LysR substrate binding domain CFSAN000658_RS05355 PF03358 NADPH-dependent FMN reductase CFSAN000658_RS05360 PF00860 Permease family CFSAN000658_RS05365 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS05370 PF01895 PhoU domain CFSAN000658_RS05375 PF00005 ABC transporter CFSAN000658_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS05390 PF12849 PBP superfamily domain CFSAN000658_RS05395 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS05395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS05400 PF08501 Shikimate dehydrogenase substrate binding domain CFSAN000658_RS05405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS05405 PF12793 Sugar transport-related sRNA regulator N-term CFSAN000658_RS05410 PF01380 SIS domain CFSAN000658_RS05415 PF12804 MobA-like NTP transferase domain CFSAN000658_RS05415 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS05425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CFSAN000658_RS05425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CFSAN000658_RS05430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS05430 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFSAN000658_RS05435 PF00231 ATP synthase CFSAN000658_RS05440 PF00306 ATP synthase alpha/beta chain, C terminal domain CFSAN000658_RS05440 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFSAN000658_RS05440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS05445 PF00213 ATP synthase delta (OSCP) subunit CFSAN000658_RS05450 PF00430 ATP synthase B/B' CF(0) CFSAN000658_RS05455 PF00137 ATP synthase subunit C CFSAN000658_RS05460 PF00119 ATP synthase A chain CFSAN000658_RS05465 PF03899 ATP synthase I chain CFSAN000658_RS05470 PF02527 rRNA small subunit methyltransferase G CFSAN000658_RS05475 PF01134 Glucose inhibited division protein A CFSAN000658_RS05475 PF13932 GidA associated domain CFSAN000658_RS05480 PF00258 Flavodoxin CFSAN000658_RS05485 PF01037 Lrp/AsnC ligand binding domain CFSAN000658_RS05490 PF03590 Aspartate-ammonia ligase CFSAN000658_RS05495 PF05762 VWA domain containing CoxE-like protein CFSAN000658_RS05500 PF17868 AAA lid domain CFSAN000658_RS05500 PF07728 AAA domain (dynein-related subfamily) CFSAN000658_RS05500 PF12592 Protein of unknown function (DUF3763) CFSAN000658_RS05505 PF02705 K+ potassium transporter CFSAN000658_RS05510 PF05025 RbsD / FucU transport protein family CFSAN000658_RS05515 PF00005 ABC transporter CFSAN000658_RS05520 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS05525 PF13407 Periplasmic binding protein domain CFSAN000658_RS05530 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS05535 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS05540 PF07690 Major Facilitator Superfamily CFSAN000658_RS05545 PF07729 FCD domain CFSAN000658_RS05545 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS05580 PF03466 LysR substrate binding domain CFSAN000658_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05585 PF04219 Protein of unknown function, DUF CFSAN000658_RS05590 PF13335 Magnesium chelatase, subunit ChlI C-terminal CFSAN000658_RS05590 PF01078 Magnesium chelatase, subunit ChlI CFSAN000658_RS05595 PF08046 IlvGEDA operon leader peptide CFSAN000658_RS05600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS05600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS05600 PF00205 Thiamine pyrophosphate enzyme, central domain CFSAN000658_RS05610 PF01063 Amino-transferase class IV CFSAN000658_RS05615 PF00920 Dehydratase family CFSAN000658_RS05620 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS05620 PF00585 C-terminal regulatory domain of Threonine dehydratase CFSAN000658_RS05635 PF03466 LysR substrate binding domain CFSAN000658_RS05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CFSAN000658_RS05640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CFSAN000658_RS05655 PF00580 UvrD/REP helicase N-terminal domain CFSAN000658_RS05655 PF13361 UvrD-like helicase C-terminal domain CFSAN000658_RS05660 PF02541 Ppx/GppA phosphatase family CFSAN000658_RS05665 PF00270 DEAD/DEAH box helicase CFSAN000658_RS05665 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS05670 PF00085 Thioredoxin CFSAN000658_RS05675 PF07498 Rho termination factor, N-terminal domain CFSAN000658_RS05675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS05675 PF07497 Rho termination factor, RNA-binding domain CFSAN000658_RS05685 PF00953 Glycosyl transferase family 4 CFSAN000658_RS05690 PF02706 Chain length determinant protein CFSAN000658_RS05695 PF02350 UDP-N-acetylglucosamine 2-epimerase CFSAN000658_RS05700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFSAN000658_RS05700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFSAN000658_RS05700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFSAN000658_RS05705 PF16363 GDP-mannose 4,6 dehydratase CFSAN000658_RS05710 PF00483 Nucleotidyl transferase CFSAN000658_RS05710 PF00483 Nucleotidyl transferase CFSAN000658_RS05720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFSAN000658_RS05725 PF01943 Polysaccharide biosynthesis protein CFSAN000658_RS05730 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CFSAN000658_RS05735 PF06899 WzyE protein, O-antigen assembly polymerase CFSAN000658_RS05740 PF03808 Glycosyl transferase WecB/TagA/CpsF family CFSAN000658_RS05745 PF00324 Amino acid permease CFSAN000658_RS05770 PF07219 HemY protein N-terminus CFSAN000658_RS05770 PF07719 Tetratricopeptide repeat CFSAN000658_RS05775 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CFSAN000658_RS05780 PF02602 Uroporphyrinogen-III synthase HemD CFSAN000658_RS05785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CFSAN000658_RS05785 PF03900 Porphobilinogen deaminase, C-terminal domain CFSAN000658_RS05790 PF01295 Adenylate cyclase, class-I CFSAN000658_RS05790 PF12633 Adenylate cyclase NT domain CFSAN000658_RS05795 PF01491 Frataxin-like domain CFSAN000658_RS05810 PF13627 Prokaryotic lipoprotein-attachment site CFSAN000658_RS05815 PF01678 Diaminopimelate epimerase CFSAN000658_RS05820 PF04340 Protein of unknown function, DUF484 CFSAN000658_RS05825 PF02899 Phage integrase, N-terminal SAM-like domain CFSAN000658_RS05825 PF00589 Phage integrase family CFSAN000658_RS05830 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS05835 PF00580 UvrD/REP helicase N-terminal domain CFSAN000658_RS05835 PF13361 UvrD-like helicase C-terminal domain CFSAN000658_RS05840 PF01544 CorA-like Mg2+ transporter protein CFSAN000658_RS05845 PF00892 EamA-like transporter family CFSAN000658_RS05850 PF03061 Thioesterase superfamily CFSAN000658_RS05855 PF02253 Phospholipase A1 CFSAN000658_RS05860 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS05860 PF00270 DEAD/DEAH box helicase CFSAN000658_RS05860 PF09382 RQC domain CFSAN000658_RS05860 PF00570 HRDC domain CFSAN000658_RS05860 PF16124 RecQ zinc-binding CFSAN000658_RS05865 PF01810 LysE type translocator CFSAN000658_RS05870 PF01810 LysE type translocator CFSAN000658_RS05875 PF12146 Serine aminopeptidase, S33 CFSAN000658_RS05885 PF00892 EamA-like transporter family CFSAN000658_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS05890 PF03466 LysR substrate binding domain CFSAN000658_RS05895 PF08267 Cobalamin-independent synthase, N-terminal domain CFSAN000658_RS05895 PF01717 Cobalamin-independent synthase, Catalytic domain CFSAN000658_RS05900 PF04055 Radical SAM superfamily CFSAN000658_RS05900 PF13186 Iron-sulfur cluster-binding domain CFSAN000658_RS05905 PF01738 Dienelactone hydrolase family CFSAN000658_RS05910 PF01048 Phosphorylase superfamily CFSAN000658_RS05915 PF02646 RmuC family CFSAN000658_RS05920 PF01209 ubiE/COQ5 methyltransferase family CFSAN000658_RS05925 PF02036 SCP-2 sterol transfer family CFSAN000658_RS05930 PF03109 ABC1 family CFSAN000658_RS05935 PF02416 mttA/Hcf106 family CFSAN000658_RS05945 PF00902 Sec-independent protein translocase protein (TatC) CFSAN000658_RS05950 PF01026 TatD related DNase CFSAN000658_RS05955 PF02357 Transcription termination factor nusG CFSAN000658_RS05960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CFSAN000658_RS05965 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS05965 PF00970 Oxidoreductase FAD-binding domain CFSAN000658_RS05970 PF17425 Arylsulfotransferase Ig-like domain CFSAN000658_RS05970 PF05935 Arylsulfotransferase (ASST) CFSAN000658_RS05975 PF02803 Thiolase, C-terminal domain CFSAN000658_RS05975 PF00108 Thiolase, N-terminal domain CFSAN000658_RS05980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS05980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFSAN000658_RS05980 PF00378 Enoyl-CoA hydratase/isomerase CFSAN000658_RS05985 PF00557 Metallopeptidase family M24 CFSAN000658_RS05990 PF01205 Uncharacterized protein family UPF0029 CFSAN000658_RS05990 PF09186 Domain of unknown function (DUF1949) CFSAN000658_RS05995 PF02386 Cation transport protein CFSAN000658_RS06000 PF12724 Flavodoxin domain CFSAN000658_RS06030 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CFSAN000658_RS06035 PF12804 MobA-like NTP transferase domain CFSAN000658_RS06040 PF06288 Protein of unknown function (DUF1040) CFSAN000658_RS06045 PF01636 Phosphotransferase enzyme family CFSAN000658_RS06050 PF01323 DSBA-like thioredoxin domain CFSAN000658_RS06055 PF01553 Acyltransferase CFSAN000658_RS06065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFSAN000658_RS06065 PF01367 5'-3' exonuclease, C-terminal SAM fold CFSAN000658_RS06065 PF00476 DNA polymerase family A CFSAN000658_RS06065 PF01612 3'-5' exonuclease CFSAN000658_RS06070 PF01926 50S ribosome-binding GTPase CFSAN000658_RS06080 PF04220 Der GTPase activator (YihI) CFSAN000658_RS06085 PF04055 Radical SAM superfamily CFSAN000658_RS06085 PF06969 HemN C-terminal domain CFSAN000658_RS06090 PF00158 Sigma-54 interaction domain CFSAN000658_RS06090 PF00072 Response regulator receiver domain CFSAN000658_RS06090 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS06095 PF00989 PAS fold CFSAN000658_RS06095 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS06100 PF00120 Glutamine synthetase, catalytic domain CFSAN000658_RS06100 PF03951 Glutamine synthetase, beta-Grasp domain CFSAN000658_RS06105 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS06105 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS06105 PF00679 Elongation factor G C-terminus CFSAN000658_RS06110 PF06178 Oligogalacturonate-specific porin protein (KdgM) CFSAN000658_RS06125 PF01055 Glycosyl hydrolases family 31 CFSAN000658_RS06130 PF01263 Aldose 1-epimerase CFSAN000658_RS06140 PF01791 DeoC/LacD family aldolase CFSAN000658_RS06145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFSAN000658_RS06145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFSAN000658_RS06150 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS06155 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS06155 PF00455 DeoR C terminal sensor domain CFSAN000658_RS06160 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS06165 PF03631 Virulence factor BrkB CFSAN000658_RS06170 PF02580 D-Tyr-tRNA(Tyr) deacylase CFSAN000658_RS06175 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS06175 PF09500 Putative thioesterase (yiiD_Cterm) CFSAN000658_RS06185 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CFSAN000658_RS06190 PF07859 alpha/beta hydrolase fold CFSAN000658_RS06195 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CFSAN000658_RS06205 PF04216 Protein involved in formate dehydrogenase formation CFSAN000658_RS06210 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS06215 PF09163 Formate dehydrogenase N, transmembrane CFSAN000658_RS06215 PF13247 4Fe-4S dicluster domain CFSAN000658_RS06220 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS06220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS06220 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS06225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS06225 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS06225 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS06230 PF02634 FdhD/NarQ family CFSAN000658_RS06235 PF12889 Protein of unknown function (DUF3829) CFSAN000658_RS06245 PF03591 AzlC protein CFSAN000658_RS06255 PF05336 L-rhamnose mutarotase CFSAN000658_RS06260 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS06265 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS06270 PF06134 L-rhamnose isomerase (RhaA) CFSAN000658_RS06275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS06275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS06280 PF12833 Helix-turn-helix domain CFSAN000658_RS06280 PF02311 AraC-like ligand binding domain CFSAN000658_RS06285 PF02311 AraC-like ligand binding domain CFSAN000658_RS06285 PF12833 Helix-turn-helix domain CFSAN000658_RS06290 PF06379 L-rhamnose-proton symport protein (RhaT) CFSAN000658_RS06300 PF06178 Oligogalacturonate-specific porin protein (KdgM) CFSAN000658_RS06305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFSAN000658_RS06310 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFSAN000658_RS06315 PF03480 Bacterial extracellular solute-binding protein, family 7 CFSAN000658_RS06320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFSAN000658_RS06320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFSAN000658_RS06325 PF03475 3-alpha domain CFSAN000658_RS06325 PF03473 MOSC domain CFSAN000658_RS06335 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS06335 PF16527 Two-component sensor protein CpxA, periplasmic domain CFSAN000658_RS06335 PF00672 HAMP domain CFSAN000658_RS06340 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS06340 PF00072 Response regulator receiver domain CFSAN000658_RS06345 PF07813 LTXXQ motif family protein CFSAN000658_RS06350 PF01545 Cation efflux family CFSAN000658_RS06350 PF16916 Dimerisation domain of Zinc Transporter CFSAN000658_RS06355 PF00365 Phosphofructokinase CFSAN000658_RS06365 PF02611 CDP-diacylglycerol pyrophosphatase CFSAN000658_RS06375 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS06385 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS06385 PF00155 Aminotransferase class I and II CFSAN000658_RS06400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS06400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS06405 PF04198 Putative sugar-binding domain CFSAN000658_RS06410 PF00005 ABC transporter CFSAN000658_RS06415 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS06420 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS06425 PF13407 Periplasmic binding protein domain CFSAN000658_RS06430 PF01791 DeoC/LacD family aldolase CFSAN000658_RS06435 PF03992 Antibiotic biosynthesis monooxygenase CFSAN000658_RS06440 PF00834 Ribulose-phosphate 3 epimerase family CFSAN000658_RS06445 PF00121 Triosephosphate isomerase CFSAN000658_RS06450 PF07305 Protein of unknown function (DUF1454) CFSAN000658_RS06455 PF05656 Protein of unknown function (DUF805) CFSAN000658_RS06460 PF00970 Oxidoreductase FAD-binding domain CFSAN000658_RS06460 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS06465 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CFSAN000658_RS06470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFSAN000658_RS06470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS06475 PF00230 Major intrinsic protein CFSAN000658_RS06480 PF06005 Cell division protein ZapB CFSAN000658_RS06485 PF03737 Aldolase/RraA CFSAN000658_RS06490 PF01040 UbiA prenyltransferase family CFSAN000658_RS06495 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS06495 PF10431 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS06495 PF07724 AAA domain (Cdc48 subfamily) CFSAN000658_RS06500 PF00227 Proteasome subunit CFSAN000658_RS06505 PF05036 Sporulation related domain CFSAN000658_RS06510 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS06515 PF17764 3′ DNA-binding domain (3′BD) CFSAN000658_RS06515 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CFSAN000658_RS06515 PF18074 Primosomal protein N C-terminal domain CFSAN000658_RS06515 PF00270 DEAD/DEAH box helicase CFSAN000658_RS06515 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS06520 PF01197 Ribosomal protein L31 CFSAN000658_RS06530 PF17425 Arylsulfotransferase Ig-like domain CFSAN000658_RS06530 PF05935 Arylsulfotransferase (ASST) CFSAN000658_RS06535 PF01340 Met Apo-repressor, MetJ CFSAN000658_RS06540 PF01053 Cys/Met metabolism PLP-dependent enzyme CFSAN000658_RS06545 PF03447 Homoserine dehydrogenase, NAD binding domain CFSAN000658_RS06545 PF00696 Amino acid kinase family CFSAN000658_RS06545 PF00742 Homoserine dehydrogenase CFSAN000658_RS06560 PF02872 5'-nucleotidase, C-terminal domain CFSAN000658_RS06560 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS06560 PF17936 Bacterial Ig domain CFSAN000658_RS06565 PF02219 Methylenetetrahydrofolate reductase CFSAN000658_RS06570 PF00141 Peroxidase CFSAN000658_RS06575 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS06580 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFSAN000658_RS06585 PF12833 Helix-turn-helix domain CFSAN000658_RS06590 PF00884 Sulfatase CFSAN000658_RS06595 PF00311 Phosphoenolpyruvate carboxylase CFSAN000658_RS06600 PF01546 Peptidase family M20/M25/M40 CFSAN000658_RS06600 PF07687 Peptidase dimerisation domain CFSAN000658_RS06605 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS06605 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFSAN000658_RS06610 PF00696 Amino acid kinase family CFSAN000658_RS06615 PF00206 Lyase CFSAN000658_RS06615 PF14698 Argininosuccinate lyase C-terminal CFSAN000658_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS06620 PF03466 LysR substrate binding domain CFSAN000658_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS06625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFSAN000658_RS06630 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS06635 PF07226 Protein of unknown function (DUF1422) CFSAN000658_RS06640 PF05958 tRNA (Uracil-5-)-methyltransferase CFSAN000658_RS06645 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS06645 PF00593 TonB dependent receptor CFSAN000658_RS06650 PF01177 Asp/Glu/Hydantoin racemase CFSAN000658_RS06680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CFSAN000658_RS06680 PF01565 FAD binding domain CFSAN000658_RS06685 PF08279 HTH domain CFSAN000658_RS06685 PF03099 Biotin/lipoate A/B protein ligase family CFSAN000658_RS06685 PF02237 Biotin protein ligase C terminal domain CFSAN000658_RS06690 PF00485 Phosphoribulokinase / Uridine kinase family CFSAN000658_RS06720 PF03143 Elongation factor Tu C-terminal domain CFSAN000658_RS06720 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS06720 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS06725 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CFSAN000658_RS06730 PF00467 KOW motif CFSAN000658_RS06730 PF02357 Transcription termination factor nusG CFSAN000658_RS06735 PF03946 Ribosomal protein L11, N-terminal domain CFSAN000658_RS06735 PF00298 Ribosomal protein L11, RNA binding domain CFSAN000658_RS06740 PF00687 Ribosomal protein L1p/L10e family CFSAN000658_RS06745 PF00466 Ribosomal protein L10 CFSAN000658_RS06750 PF00542 Ribosomal protein L7/L12 C-terminal domain CFSAN000658_RS06750 PF16320 Ribosomal protein L7/L12 dimerisation domain CFSAN000658_RS06755 PF04561 RNA polymerase Rpb2, domain 2 CFSAN000658_RS06755 PF04565 RNA polymerase Rpb2, domain 3 CFSAN000658_RS06755 PF04563 RNA polymerase beta subunit CFSAN000658_RS06755 PF10385 RNA polymerase beta subunit external 1 domain CFSAN000658_RS06755 PF00562 RNA polymerase Rpb2, domain 6 CFSAN000658_RS06755 PF04560 RNA polymerase Rpb2, domain 7 CFSAN000658_RS06760 PF04997 RNA polymerase Rpb1, domain 1 CFSAN000658_RS06760 PF00623 RNA polymerase Rpb1, domain 2 CFSAN000658_RS06760 PF04998 RNA polymerase Rpb1, domain 5 CFSAN000658_RS06760 PF04983 RNA polymerase Rpb1, domain 3 CFSAN000658_RS06760 PF05000 RNA polymerase Rpb1, domain 4 CFSAN000658_RS06780 PF06968 Biotin and Thiamin Synthesis associated domain CFSAN000658_RS06780 PF04055 Radical SAM superfamily CFSAN000658_RS06785 PF05690 Thiazole biosynthesis protein ThiG CFSAN000658_RS06790 PF02597 ThiS family CFSAN000658_RS06795 PF00899 ThiF family CFSAN000658_RS06800 PF02581 Thiamine monophosphate synthase CFSAN000658_RS06805 PF01964 Radical SAM ThiC family CFSAN000658_RS06805 PF13667 ThiC-associated domain CFSAN000658_RS06810 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CFSAN000658_RS06815 PF09297 NADH pyrophosphatase zinc ribbon domain CFSAN000658_RS06815 PF00293 NUDIX domain CFSAN000658_RS06820 PF01208 Uroporphyrinogen decarboxylase (URO-D) CFSAN000658_RS06825 PF04493 Endonuclease V CFSAN000658_RS06830 PF04222 Protein of unknown function (DUF416) CFSAN000658_RS06835 PF00216 Bacterial DNA-binding protein CFSAN000658_RS06840 PF07356 Protein of unknown function (DUF1481) CFSAN000658_RS06845 PF13801 Heavy-metal resistance CFSAN000658_RS06850 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS06855 PF00072 Response regulator receiver domain CFSAN000658_RS06855 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS06855 PF00158 Sigma-54 interaction domain CFSAN000658_RS06860 PF02843 Phosphoribosylglycinamide synthetase, C domain CFSAN000658_RS06860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFSAN000658_RS06860 PF02844 Phosphoribosylglycinamide synthetase, N domain CFSAN000658_RS06865 PF02142 MGS-like domain CFSAN000658_RS06865 PF01808 AICARFT/IMPCHase bienzyme CFSAN000658_RS06890 PF13673 Acetyltransferase (GNAT) domain CFSAN000658_RS06895 PF04204 Homoserine O-succinyltransferase CFSAN000658_RS06900 PF01274 Malate synthase CFSAN000658_RS06905 PF00463 Isocitrate lyase family CFSAN000658_RS06910 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CFSAN000658_RS06920 PF01614 Bacterial transcriptional regulator CFSAN000658_RS06920 PF09339 IclR helix-turn-helix domain CFSAN000658_RS06925 PF02574 Homocysteine S-methyltransferase CFSAN000658_RS06925 PF00809 Pterin binding enzyme CFSAN000658_RS06925 PF02965 Vitamin B12 dependent methionine synthase, activation domain CFSAN000658_RS06925 PF02607 B12 binding domain CFSAN000658_RS06925 PF02310 B12 binding domain CFSAN000658_RS06930 PF02690 Na+/Pi-cotransporter CFSAN000658_RS06935 PF03575 Peptidase family S51 CFSAN000658_RS06945 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CFSAN000658_RS06950 PF01479 S4 domain CFSAN000658_RS06950 PF00849 RNA pseudouridylate synthase CFSAN000658_RS06955 PF11656 YjbD family (DUF3811) CFSAN000658_RS06960 PF00455 DeoR C terminal sensor domain CFSAN000658_RS06960 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS06980 PF00696 Amino acid kinase family CFSAN000658_RS06980 PF01842 ACT domain CFSAN000658_RS06985 PF00342 Phosphoglucose isomerase CFSAN000658_RS06990 PF00665 Integrase core domain CFSAN000658_RS06990 PF13333 Integrase core domain CFSAN000658_RS06990 PF13276 HTH-like domain CFSAN000658_RS07005 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CFSAN000658_RS07010 PF06251 Capsule biosynthesis GfcC CFSAN000658_RS07015 PF06082 Exopolysaccharide biosynthesis protein YbjH CFSAN000658_RS07020 PF06146 Phosphate-starvation-inducible E CFSAN000658_RS07025 PF00083 Sugar (and other) transporter CFSAN000658_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS07035 PF14785 Maltose transport system permease protein MalF P2 domain CFSAN000658_RS07035 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS07040 PF01547 Bacterial extracellular solute-binding protein CFSAN000658_RS07045 PF00005 ABC transporter CFSAN000658_RS07045 PF17912 MalK OB fold domain CFSAN000658_RS07050 PF02264 LamB porin CFSAN000658_RS07055 PF07148 Maltose operon periplasmic protein precursor (MalM) CFSAN000658_RS07060 PF04345 Chorismate lyase CFSAN000658_RS07065 PF01040 UbiA prenyltransferase family CFSAN000658_RS07070 PF01553 Acyltransferase CFSAN000658_RS07075 PF01219 Prokaryotic diacylglycerol kinase CFSAN000658_RS07080 PF00717 Peptidase S24-like CFSAN000658_RS07080 PF01726 LexA DNA binding domain CFSAN000658_RS07085 PF01554 MatE CFSAN000658_RS07095 PF05532 CsbD-like CFSAN000658_RS07100 PF01475 Ferric uptake regulator family CFSAN000658_RS07110 PF01207 Dihydrouridine synthase (Dus) CFSAN000658_RS07115 PF09583 Phage shock protein G (Phageshock_PspG) CFSAN000658_RS07120 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS07120 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS07125 PF03796 DnaB-like helicase C terminal domain CFSAN000658_RS07125 PF00772 DnaB-like helicase N terminal domain CFSAN000658_RS07130 PF01168 Alanine racemase, N-terminal domain CFSAN000658_RS07130 PF00842 Alanine racemase, C-terminal domain CFSAN000658_RS07135 PF00155 Aminotransferase class I and II CFSAN000658_RS07140 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CFSAN000658_RS07145 PF01894 Uncharacterised protein family UPF0047 CFSAN000658_RS07150 PF04237 YjbR CFSAN000658_RS07165 PF00005 ABC transporter CFSAN000658_RS07165 PF17760 UvrA interaction domain CFSAN000658_RS07165 PF17755 UvrA DNA-binding domain CFSAN000658_RS07175 PF00436 Single-strand binding protein family CFSAN000658_RS07205 PF00664 ABC transporter transmembrane region CFSAN000658_RS07205 PF00005 ABC transporter CFSAN000658_RS07210 PF15940 Family of unknown function CFSAN000658_RS07220 PF12833 Helix-turn-helix domain CFSAN000658_RS07225 PF00376 MerR family regulatory protein CFSAN000658_RS07225 PF09278 MerR, DNA binding CFSAN000658_RS07235 PF00860 Permease family CFSAN000658_RS07240 PF00999 Sodium/hydrogen exchanger family CFSAN000658_RS07245 PF03466 LysR substrate binding domain CFSAN000658_RS07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS07250 PF03788 LrgA family CFSAN000658_RS07255 PF04172 LrgB-like family CFSAN000658_RS07260 PF00474 Sodium:solute symporter family CFSAN000658_RS07265 PF04341 Protein of unknown function, DUF485 CFSAN000658_RS07270 PF16177 Acetyl-coenzyme A synthetase N-terminus CFSAN000658_RS07270 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS07270 PF00501 AMP-binding enzyme CFSAN000658_RS07280 PF02335 Cytochrome c552 CFSAN000658_RS07285 PF13435 Cytochrome c554 and c-prime CFSAN000658_RS07285 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CFSAN000658_RS07290 PF00037 4Fe-4S binding domain CFSAN000658_RS07290 PF13247 4Fe-4S dicluster domain CFSAN000658_RS07295 PF03916 Polysulphide reductase, NrfD CFSAN000658_RS07300 PF01578 Cytochrome C assembly protein CFSAN000658_RS07300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CFSAN000658_RS07305 PF03918 Cytochrome C biogenesis protein CFSAN000658_RS07315 PF00375 Sodium:dicarboxylate symporter family CFSAN000658_RS07320 PF08238 Sel1 repeat CFSAN000658_RS07325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS07325 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS07325 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS07330 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS07330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS07330 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS07340 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS07345 PF06983 3-demethylubiquinone-9 3-methyltransferase CFSAN000658_RS07350 PF03831 PhnA domain CFSAN000658_RS07350 PF08274 PhnA Zinc-Ribbon CFSAN000658_RS07355 PF00083 Sugar (and other) transporter CFSAN000658_RS07355 PF08946 Osmosensory transporter coiled coil CFSAN000658_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS07365 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS07370 PF00072 Response regulator receiver domain CFSAN000658_RS07370 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS07375 PF00884 Sulfatase CFSAN000658_RS07375 PF08019 Phosphoethanolamine transferase EptA/EptB CFSAN000658_RS07380 PF13520 Amino acid permease CFSAN000658_RS07385 PF12833 Helix-turn-helix domain CFSAN000658_RS07395 PF01276 Orn/Lys/Arg decarboxylase, major domain CFSAN000658_RS07395 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CFSAN000658_RS07395 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFSAN000658_RS07400 PF12833 Helix-turn-helix domain CFSAN000658_RS07405 PF11975 Family 4 glycosyl hydrolase C-terminal domain CFSAN000658_RS07405 PF02056 Family 4 glycosyl hydrolase CFSAN000658_RS07415 PF05683 Fumarase C-terminus CFSAN000658_RS07415 PF05681 Fumarate hydratase (Fumerase) CFSAN000658_RS07420 PF03605 Anaerobic c4-dicarboxylate membrane transporter CFSAN000658_RS07430 PF00072 Response regulator receiver domain CFSAN000658_RS07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS07435 PF00989 PAS fold CFSAN000658_RS07435 PF17203 Single cache domain 3 CFSAN000658_RS07435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CFSAN000658_RS07440 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS07440 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS07440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS07445 PF13247 4Fe-4S dicluster domain CFSAN000658_RS07445 PF12800 4Fe-4S binding domain CFSAN000658_RS07450 PF04976 DMSO reductase anchor subunit (DmsC) CFSAN000658_RS07455 PF02613 Nitrate reductase delta subunit CFSAN000658_RS07465 PF06977 SdiA-regulated CFSAN000658_RS07470 PF00005 ABC transporter CFSAN000658_RS07475 PF00072 Response regulator receiver domain CFSAN000658_RS07475 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS07480 PF12833 Helix-turn-helix domain CFSAN000658_RS07500 PF01569 PAP2 superfamily CFSAN000658_RS07515 PF11412 Disulphide bond corrector protein DsbC CFSAN000658_RS07515 PF02683 Cytochrome C biogenesis protein transmembrane region CFSAN000658_RS07520 PF03091 CutA1 divalent ion tolerance protein CFSAN000658_RS07525 PF03605 Anaerobic c4-dicarboxylate membrane transporter CFSAN000658_RS07530 PF10415 Fumarase C C-terminus CFSAN000658_RS07530 PF00206 Lyase CFSAN000658_RS07540 PF04186 FxsA cytoplasmic membrane protein CFSAN000658_RS07545 PF13520 Amino acid permease CFSAN000658_RS07550 PF00166 Chaperonin 10 Kd subunit CFSAN000658_RS07555 PF00118 TCP-1/cpn60 chaperonin family CFSAN000658_RS07560 PF13698 Domain of unknown function (DUF4156) CFSAN000658_RS07565 PF15922 YjeJ-like CFSAN000658_RS07570 PF04055 Radical SAM superfamily CFSAN000658_RS07575 PF01132 Elongation factor P (EF-P) OB domain CFSAN000658_RS07575 PF08207 Elongation factor P (EF-P) KOW-like domain CFSAN000658_RS07575 PF09285 Elongation factor P, C-terminal CFSAN000658_RS07580 PF08085 Entericidin EcnA/B family CFSAN000658_RS07585 PF08085 Entericidin EcnA/B family CFSAN000658_RS07590 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS07595 PF00893 Small Multidrug Resistance protein CFSAN000658_RS07600 PF08212 Lipocalin-like domain CFSAN000658_RS07605 PF02313 Fumarate reductase subunit D CFSAN000658_RS07610 PF02300 Fumarate reductase subunit C CFSAN000658_RS07615 PF13085 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS07615 PF13183 4Fe-4S dicluster domain CFSAN000658_RS07620 PF00890 FAD binding domain CFSAN000658_RS07620 PF02910 Fumarate reductase flavoprotein C-term CFSAN000658_RS07625 PF00152 tRNA synthetases class II (D, K and N) CFSAN000658_RS07630 PF13520 Amino acid permease CFSAN000658_RS07635 PF00924 Mechanosensitive ion channel CFSAN000658_RS07635 PF12794 Mechanosensitive ion channel inner membrane domain 1 CFSAN000658_RS07635 PF12795 Mechanosensitive ion channel porin domain CFSAN000658_RS07640 PF02666 Phosphatidylserine decarboxylase CFSAN000658_RS07645 PF03193 RsgA GTPase CFSAN000658_RS07650 PF00929 Exonuclease CFSAN000658_RS07655 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS07675 PF08331 Domain of unknown function (DUF1730) CFSAN000658_RS07680 PF01256 Carbohydrate kinase CFSAN000658_RS07680 PF03853 YjeF-related protein N-terminus CFSAN000658_RS07685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CFSAN000658_RS07690 PF01520 N-acetylmuramoyl-L-alanine amidase CFSAN000658_RS07695 PF08676 MutL C terminal dimerisation domain CFSAN000658_RS07695 PF01119 DNA mismatch repair protein, C-terminal domain CFSAN000658_RS07705 PF17209 Hfq protein CFSAN000658_RS07710 PF01926 50S ribosome-binding GTPase CFSAN000658_RS07710 PF16360 GTP-binding GTPase Middle Region CFSAN000658_RS07710 PF13167 GTP-binding GTPase N-terminal CFSAN000658_RS07715 PF12221 Bacterial membrane protein N terminal CFSAN000658_RS07715 PF01145 SPFH domain / Band 7 family CFSAN000658_RS07720 PF01145 SPFH domain / Band 7 family CFSAN000658_RS07725 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CFSAN000658_RS07730 PF00709 Adenylosuccinate synthetase CFSAN000658_RS07735 PF02082 Transcriptional regulator CFSAN000658_RS07740 PF00773 RNB domain CFSAN000658_RS07740 PF08461 Ribonuclease R winged-helix domain CFSAN000658_RS07740 PF17876 Cold shock domain CFSAN000658_RS07740 PF08206 Ribonuclease B OB domain CFSAN000658_RS07740 PF00575 S1 RNA binding domain CFSAN000658_RS07745 PF00588 SpoU rRNA Methylase family CFSAN000658_RS07745 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFSAN000658_RS07750 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CFSAN000658_RS07755 PF04012 PspA/IM30 family CFSAN000658_RS07760 PF10679 Protein of unknown function (DUF2491) CFSAN000658_RS07765 PF03994 Domain of Unknown Function (DUF350) CFSAN000658_RS07770 PF06693 Protein of unknown function (DUF1190) CFSAN000658_RS07775 PF03738 Glutathionylspermidine synthase preATP-grasp CFSAN000658_RS07780 PF02770 Acyl-CoA dehydrogenase, middle domain CFSAN000658_RS07780 PF18158 Adaptive response protein AidB N-terminal domain CFSAN000658_RS07780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS07785 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS07790 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS07795 PF00326 Prolyl oligopeptidase family CFSAN000658_RS07800 PF00455 DeoR C terminal sensor domain CFSAN000658_RS07800 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS07810 PF03611 PTS system sugar-specific permease component CFSAN000658_RS07815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS07820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS07825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS07830 PF01261 Xylose isomerase-like TIM barrel CFSAN000658_RS07835 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS07840 PF07274 Protein of unknown function (DUF1440) CFSAN000658_RS07845 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS07850 PF01250 Ribosomal protein S6 CFSAN000658_RS07855 PF00436 Single-strand binding protein family CFSAN000658_RS07860 PF01084 Ribosomal protein S18 CFSAN000658_RS07865 PF03948 Ribosomal protein L9, C-terminal domain CFSAN000658_RS07865 PF01281 Ribosomal protein L9, N-terminal domain CFSAN000658_RS07875 PF04225 Opacity-associated protein A LysM-like domain CFSAN000658_RS07875 PF08525 Opacity-associated protein A N-terminal motif CFSAN000658_RS07880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CFSAN000658_RS07880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFSAN000658_RS07885 PF00324 Amino acid permease CFSAN000658_RS07890 PF04405 Domain of Unknown function (DUF542) CFSAN000658_RS07890 PF01814 Hemerythrin HHE cation binding domain CFSAN000658_RS07895 PF00892 EamA-like transporter family CFSAN000658_RS07900 PF05368 NmrA-like family CFSAN000658_RS07905 PF01638 HxlR-like helix-turn-helix CFSAN000658_RS07910 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS07910 PF02872 5'-nucleotidase, C-terminal domain CFSAN000658_RS07915 PF00459 Inositol monophosphatase family CFSAN000658_RS07920 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CFSAN000658_RS07925 PF06526 Protein of unknown function (DUF1107) CFSAN000658_RS07930 PF00571 CBS domain CFSAN000658_RS07930 PF03471 Transporter associated domain CFSAN000658_RS07930 PF01595 Cyclin M transmembrane N-terminal domain CFSAN000658_RS07935 PF01625 Peptide methionine sulfoxide reductase CFSAN000658_RS07940 PF01103 Surface antigen CFSAN000658_RS07940 PF07244 Surface antigen variable number repeat CFSAN000658_RS07940 PF17243 POTRA domain TamA domain 1 CFSAN000658_RS07945 PF04357 TamB, inner membrane protein subunit of TAM complex CFSAN000658_RS07950 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CFSAN000658_RS07955 PF07690 Major Facilitator Superfamily CFSAN000658_RS07960 PF01979 Amidohydrolase family CFSAN000658_RS07965 PF00719 Inorganic pyrophosphatase CFSAN000658_RS07970 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CFSAN000658_RS07975 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS07975 PF01225 Mur ligase family, catalytic domain CFSAN000658_RS07975 PF08245 Mur ligase middle domain CFSAN000658_RS07980 PF04751 Protein of unknown function (DUF615) CFSAN000658_RS07985 PF01523 Putative modulator of DNA gyrase CFSAN000658_RS07990 PF07361 Cytochrome b562 CFSAN000658_RS08020 PF01979 Amidohydrolase family CFSAN000658_RS08025 PF03841 L-seryl-tRNA selenium transferase CFSAN000658_RS08030 PF07071 KDGP aldolase CFSAN000658_RS08035 PF08279 HTH domain CFSAN000658_RS08035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS08035 PF05043 Mga helix-turn-helix domain CFSAN000658_RS08035 PF00874 PRD domain CFSAN000658_RS08040 PF04221 RelB antitoxin CFSAN000658_RS08045 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CFSAN000658_RS08055 PF03477 ATP cone domain CFSAN000658_RS08055 PF13597 Anaerobic ribonucleoside-triphosphate reductase CFSAN000658_RS08065 PF11941 Domain of unknown function (DUF3459) CFSAN000658_RS08065 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS08070 PF00367 phosphotransferase system, EIIB CFSAN000658_RS08070 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS08075 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS08080 PF00689 Cation transporting ATPase, C-terminus CFSAN000658_RS08080 PF00690 Cation transporter/ATPase, N-terminus CFSAN000658_RS08085 PF01042 Endoribonuclease L-PSP CFSAN000658_RS08090 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CFSAN000658_RS08090 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CFSAN000658_RS08095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFSAN000658_RS08095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFSAN000658_RS08100 PF08052 PyrBI operon leader peptide CFSAN000658_RS08105 PF02863 Arginine repressor, C-terminal domain CFSAN000658_RS08105 PF01316 Arginine repressor, DNA binding domain CFSAN000658_RS08110 PF03606 C4-dicarboxylate anaerobic carrier CFSAN000658_RS08115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFSAN000658_RS08115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFSAN000658_RS08120 PF00696 Amino acid kinase family CFSAN000658_RS08130 PF04074 YhcH/YjgK/YiaL CFSAN000658_RS08135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFSAN000658_RS08135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFSAN000658_RS08140 PF06877 Regulator of ribonuclease activity B CFSAN000658_RS08145 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CFSAN000658_RS08150 PF12276 Protein of unknown function (DUF3617) CFSAN000658_RS08155 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS08160 PF05987 Bacterial protein of unknown function (DUF898) CFSAN000658_RS08165 PF08264 Anticodon-binding domain of tRNA CFSAN000658_RS08165 PF10458 Valyl tRNA synthetase tRNA binding arm CFSAN000658_RS08165 PF00133 tRNA synthetases class I (I, L, M and V) CFSAN000658_RS08170 PF04364 DNA polymerase III chi subunit, HolC CFSAN000658_RS08175 PF00883 Cytosol aminopeptidase family, catalytic domain CFSAN000658_RS08175 PF02789 Cytosol aminopeptidase family, N-terminal domain CFSAN000658_RS08185 PF03739 Lipopolysaccharide export system permease LptF/LptG CFSAN000658_RS08190 PF03739 Lipopolysaccharide export system permease LptF/LptG CFSAN000658_RS08195 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS08200 PF02447 GntP family permease CFSAN000658_RS08205 PF00106 short chain dehydrogenase CFSAN000658_RS08210 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS08210 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS08215 PF01202 Shikimate kinase CFSAN000658_RS08220 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS08220 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS08230 PF00589 Phage integrase family CFSAN000658_RS08230 PF13356 Arm DNA-binding domain CFSAN000658_RS08255 PF04606 Ogr/Delta-like zinc finger CFSAN000658_RS08280 PF17345 Family of unknown function (DUF5375) CFSAN000658_RS08295 PF13091 PLD-like domain CFSAN000658_RS08295 PF13087 AAA domain CFSAN000658_RS08300 PF18284 DNA methylase N-terminal domain CFSAN000658_RS08300 PF00145 C-5 cytosine-specific DNA methylase CFSAN000658_RS08305 PF09019 EcoRII C terminal CFSAN000658_RS08305 PF09217 Restriction endonuclease EcoRII, N-terminal CFSAN000658_RS08315 PF01709 Transcriptional regulator CFSAN000658_RS08320 PF13847 Methyltransferase domain CFSAN000658_RS08325 PF09857 Putative toxin of bacterial toxin-antitoxin pair CFSAN000658_RS08345 PF03625 Domain of unknown function DUF302 CFSAN000658_RS08345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFSAN000658_RS08350 PF01738 Dienelactone hydrolase family CFSAN000658_RS08355 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS08355 PF07729 FCD domain CFSAN000658_RS08360 PF00579 tRNA synthetases class I (W and Y) CFSAN000658_RS08375 PF01177 Asp/Glu/Hydantoin racemase CFSAN000658_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS08380 PF03466 LysR substrate binding domain CFSAN000658_RS08385 PF01979 Amidohydrolase family CFSAN000658_RS08390 PF07670 Nucleoside recognition CFSAN000658_RS08395 PF07670 Nucleoside recognition CFSAN000658_RS08405 PF06779 Uncharacterised MFS-type transporter YbfB CFSAN000658_RS08410 PF04286 Protein of unknown function (DUF445) CFSAN000658_RS08415 PF07690 Major Facilitator Superfamily CFSAN000658_RS08420 PF04754 Putative transposase, YhgA-like CFSAN000658_RS08425 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS08445 PF01810 LysE type translocator CFSAN000658_RS08450 PF02311 AraC-like ligand binding domain CFSAN000658_RS08450 PF12833 Helix-turn-helix domain CFSAN000658_RS08455 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFSAN000658_RS08455 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFSAN000658_RS08460 PF04328 Selenoprotein, putative CFSAN000658_RS08465 PF02554 Carbon starvation protein CstA CFSAN000658_RS08465 PF13722 5TM C-terminal transporter carbon starvation CstA CFSAN000658_RS08470 PF02203 Tar ligand binding domain homologue CFSAN000658_RS08470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS08470 PF00672 HAMP domain CFSAN000658_RS08475 PF00884 Sulfatase CFSAN000658_RS08480 PF10696 Protein of unknown function (DUF2501) CFSAN000658_RS08485 PF01695 IstB-like ATP binding protein CFSAN000658_RS08490 PF17948 DnaT DNA-binding domain CFSAN000658_RS08495 PF12821 Threonine/Serine exporter, ThrE CFSAN000658_RS08500 PF06738 Putative threonine/serine exporter CFSAN000658_RS08505 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS08510 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS08515 PF04073 Aminoacyl-tRNA editing domain CFSAN000658_RS08520 PF11575 FhuF 2Fe-2S C-terminal domain CFSAN000658_RS08520 PF06276 Ferric iron reductase FhuF-like transporter CFSAN000658_RS08525 PF05230 MASE2 domain CFSAN000658_RS08525 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS08530 PF07256 Protein of unknown function (DUF1435) CFSAN000658_RS08550 PF08468 Methyltransferase small domain N-terminal CFSAN000658_RS08550 PF05175 Methyltransferase small domain CFSAN000658_RS08555 PF03603 DNA polymerase III psi subunit CFSAN000658_RS08560 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS08565 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS08570 PF16658 Class II release factor RF3, C-terminal domain CFSAN000658_RS08570 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS08570 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS08575 PF04972 BON domain CFSAN000658_RS08580 PF07043 Protein of unknown function (DUF1328) CFSAN000658_RS08585 PF01734 Patatin-like phospholipase CFSAN000658_RS08590 PF01026 TatD related DNase CFSAN000658_RS08595 PF04055 Radical SAM superfamily CFSAN000658_RS08600 PF11230 Protein of unknown function (DUF3029) CFSAN000658_RS08605 PF01791 DeoC/LacD family aldolase CFSAN000658_RS08610 PF00591 Glycosyl transferase family, a/b domain CFSAN000658_RS08610 PF02885 Glycosyl transferase family, helical bundle domain CFSAN000658_RS08610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CFSAN000658_RS08615 PF01676 Metalloenzyme superfamily CFSAN000658_RS08620 PF01048 Phosphorylase superfamily CFSAN000658_RS08630 PF13954 PapC N-terminal domain CFSAN000658_RS08630 PF13953 PapC C-terminal domain CFSAN000658_RS08630 PF00577 Outer membrane usher protein CFSAN000658_RS08635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS08640 PF06551 Protein of unknown function (DUF1120) CFSAN000658_RS08650 PF03099 Biotin/lipoate A/B protein ligase family CFSAN000658_RS08650 PF10437 Bacterial lipoate protein ligase C-terminus CFSAN000658_RS08655 PF10144 Bacterial virulence factor haemolysin CFSAN000658_RS08660 PF18429 Domain of unknown function (DUF5609) CFSAN000658_RS08665 PF18073 Rubredoxin metal binding domain CFSAN000658_RS08670 PF13521 AAA domain CFSAN000658_RS08670 PF01381 Helix-turn-helix CFSAN000658_RS08675 PF12848 ABC transporter CFSAN000658_RS08675 PF00005 ABC transporter CFSAN000658_RS08680 PF14718 Soluble lytic murein transglycosylase L domain CFSAN000658_RS08680 PF01464 Transglycosylase SLT domain CFSAN000658_RS08685 PF01371 Trp repressor protein CFSAN000658_RS08690 PF01931 Protein of unknown function DUF84 CFSAN000658_RS08695 PF00300 Histidine phosphatase superfamily (branch 1) CFSAN000658_RS08700 PF12833 Helix-turn-helix domain CFSAN000658_RS08700 PF06445 GyrI-like small molecule binding domain CFSAN000658_RS08705 PF05981 CreA protein CFSAN000658_RS08710 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS08710 PF00072 Response regulator receiver domain CFSAN000658_RS08715 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS08715 PF00672 HAMP domain CFSAN000658_RS08720 PF06123 Inner membrane protein CreD CFSAN000658_RS08735 PF13954 PapC N-terminal domain CFSAN000658_RS08735 PF13953 PapC C-terminal domain CFSAN000658_RS08735 PF00577 Outer membrane usher protein CFSAN000658_RS08740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS08740 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS08750 PF15977 Winged helix-turn-helix DNA binding CFSAN000658_RS08760 PF00072 Response regulator receiver domain CFSAN000658_RS08760 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS08770 PF00588 SpoU rRNA Methylase family CFSAN000658_RS08775 PF08254 Threonine leader peptide CFSAN000658_RS08780 PF00696 Amino acid kinase family CFSAN000658_RS08780 PF01842 ACT domain CFSAN000658_RS08780 PF00742 Homoserine dehydrogenase CFSAN000658_RS08780 PF13840 ACT domain CFSAN000658_RS08780 PF03447 Homoserine dehydrogenase, NAD binding domain CFSAN000658_RS08785 PF00288 GHMP kinases N terminal domain CFSAN000658_RS08785 PF08544 GHMP kinases C terminal CFSAN000658_RS08790 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS08790 PF14821 Threonine synthase N terminus CFSAN000658_RS08795 PF03883 Peroxide stress protein YaaA CFSAN000658_RS08800 PF01235 Sodium:alanine symporter family CFSAN000658_RS08805 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFSAN000658_RS08810 PF00994 Probable molybdopterin binding domain CFSAN000658_RS08815 PF01184 GPR1/FUN34/yaaH family CFSAN000658_RS08820 PF13099 Domain of unknown function (DUF3944) CFSAN000658_RS08820 PF03981 Ubiquinol-cytochrome C chaperone CFSAN000658_RS08825 PF10807 Protein of unknown function (DUF2541) CFSAN000658_RS08830 PF00012 Hsp70 protein CFSAN000658_RS08835 PF00226 DnaJ domain CFSAN000658_RS08835 PF01556 DnaJ C terminal domain CFSAN000658_RS08835 PF00684 DnaJ central domain CFSAN000658_RS08840 PF03466 LysR substrate binding domain CFSAN000658_RS08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS08860 PF00704 Glycosyl hydrolases family 18 CFSAN000658_RS08875 PF00419 Fimbrial protein CFSAN000658_RS08880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS08880 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS08885 PF00577 Outer membrane usher protein CFSAN000658_RS08885 PF13954 PapC N-terminal domain CFSAN000658_RS08885 PF13953 PapC C-terminal domain CFSAN000658_RS08890 PF00419 Fimbrial protein CFSAN000658_RS08895 PF00419 Fimbrial protein CFSAN000658_RS08900 PF16970 Type-1 fimbrial protein, A CFSAN000658_RS08905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS08905 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS08945 PF16385 Domain of unknown function CFSAN000658_RS08945 PF00884 Sulfatase CFSAN000658_RS08950 PF04055 Radical SAM superfamily CFSAN000658_RS08950 PF13186 Iron-sulfur cluster-binding domain CFSAN000658_RS08965 PF06965 Na+/H+ antiporter 1 CFSAN000658_RS08970 PF03466 LysR substrate binding domain CFSAN000658_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS08975 PF01055 Glycosyl hydrolases family 31 CFSAN000658_RS08985 PF01649 Ribosomal protein S20 CFSAN000658_RS08990 PF10837 Protein of unknown function (DUF2575) CFSAN000658_RS08995 PF01687 Riboflavin kinase CFSAN000658_RS08995 PF06574 FAD synthetase CFSAN000658_RS09000 PF06827 Zinc finger found in FPG and IleRS CFSAN000658_RS09000 PF00133 tRNA synthetases class I (I, L, M and V) CFSAN000658_RS09000 PF08264 Anticodon-binding domain of tRNA CFSAN000658_RS09005 PF01252 Signal peptidase (SPase) II CFSAN000658_RS09010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFSAN000658_RS09015 PF02401 LytB protein CFSAN000658_RS09025 PF01156 Inosine-uridine preferring nucleoside hydrolase CFSAN000658_RS09030 PF00072 Response regulator receiver domain CFSAN000658_RS09030 PF12431 Transcriptional regulator CFSAN000658_RS09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS09035 PF17203 Single cache domain 3 CFSAN000658_RS09040 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CFSAN000658_RS09045 PF02436 Conserved carboxylase domain CFSAN000658_RS09045 PF00682 HMGL-like CFSAN000658_RS09045 PF00364 Biotin-requiring enzyme CFSAN000658_RS09050 PF04277 Oxaloacetate decarboxylase, gamma chain CFSAN000658_RS09055 PF03390 2-hydroxycarboxylate transporter family CFSAN000658_RS09060 PF08218 Citrate lyase ligase C-terminal domain CFSAN000658_RS09060 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS09065 PF06857 Malonate decarboxylase delta subunit (MdcD) CFSAN000658_RS09070 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS09075 PF04223 Citrate lyase, alpha subunit (CitF) CFSAN000658_RS09080 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CFSAN000658_RS09085 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CFSAN000658_RS09090 PF01113 Dihydrodipicolinate reductase, N-terminus CFSAN000658_RS09090 PF05173 Dihydrodipicolinate reductase, C-terminus CFSAN000658_RS09095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CFSAN000658_RS09095 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS09100 PF02142 MGS-like domain CFSAN000658_RS09100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFSAN000658_RS09100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFSAN000658_RS09105 PF07180 CaiF/GrlA transcriptional regulator CFSAN000658_RS09110 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS09115 PF00378 Enoyl-CoA hydratase/isomerase CFSAN000658_RS09120 PF00501 AMP-binding enzyme CFSAN000658_RS09120 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS09125 PF02515 CoA-transferase family III CFSAN000658_RS09130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFSAN000658_RS09130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS09130 PF02770 Acyl-CoA dehydrogenase, middle domain CFSAN000658_RS09135 PF02028 BCCT, betaine/carnitine/choline family transporter CFSAN000658_RS09145 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS09150 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS09150 PF00766 Electron transfer flavoprotein FAD-binding domain CFSAN000658_RS09155 PF01494 FAD binding domain CFSAN000658_RS09165 PF00083 Sugar (and other) transporter CFSAN000658_RS09170 PF06004 Bacterial protein of unknown function (DUF903) CFSAN000658_RS09190 PF00884 Sulfatase CFSAN000658_RS09200 PF02525 Flavodoxin-like fold CFSAN000658_RS09205 PF02254 TrkA-N domain CFSAN000658_RS09205 PF00999 Sodium/hydrogen exchanger family CFSAN000658_RS09210 PF00186 Dihydrofolate reductase CFSAN000658_RS09215 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS09220 PF04379 ApaG domain CFSAN000658_RS09225 PF00398 Ribosomal RNA adenine dimethylase CFSAN000658_RS09230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFSAN000658_RS09235 PF09312 SurA N-terminal domain CFSAN000658_RS09235 PF00639 PPIC-type PPIASE domain CFSAN000658_RS09240 PF04453 LPS transport system D CFSAN000658_RS09240 PF03968 OstA-like protein CFSAN000658_RS09245 PF00226 DnaJ domain CFSAN000658_RS09245 PF05099 Tellurite resistance protein TerB CFSAN000658_RS09250 PF00849 RNA pseudouridylate synthase CFSAN000658_RS09255 PF00176 SNF2 family N-terminal domain CFSAN000658_RS09255 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS09255 PF18337 RapA N-terminal Tudor like domain CFSAN000658_RS09255 PF12137 RNA polymerase recycling family C-terminal CFSAN000658_RS09255 PF18339 RapA N-terminal Tudor like domain 1 CFSAN000658_RS09260 PF03104 DNA polymerase family B, exonuclease domain CFSAN000658_RS09260 PF00136 DNA polymerase family B CFSAN000658_RS09275 PF00596 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS09280 PF11762 L-arabinose isomerase C-terminal domain CFSAN000658_RS09280 PF02610 L-arabinose isomerase CFSAN000658_RS09285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFSAN000658_RS09290 PF02311 AraC-like ligand binding domain CFSAN000658_RS09290 PF12833 Helix-turn-helix domain CFSAN000658_RS09295 PF09335 SNARE associated Golgi protein CFSAN000658_RS09300 PF00005 ABC transporter CFSAN000658_RS09305 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS09315 PF12793 Sugar transport-related sRNA regulator N-term CFSAN000658_RS09315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS09325 PF00694 Aconitase C-terminal domain CFSAN000658_RS09330 PF00330 Aconitase family (aconitate hydratase) CFSAN000658_RS09335 PF00180 Isocitrate/isopropylmalate dehydrogenase CFSAN000658_RS09340 PF08502 LeuA allosteric (dimerisation) domain CFSAN000658_RS09340 PF00682 HMGL-like CFSAN000658_RS09345 PF08054 Leucine operon leader peptide CFSAN000658_RS09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS09350 PF03466 LysR substrate binding domain CFSAN000658_RS09355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS09355 PF00205 Thiamine pyrophosphate enzyme, central domain CFSAN000658_RS09355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS09360 PF10369 Small subunit of acetolactate synthase CFSAN000658_RS09365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFSAN000658_RS09365 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS09370 PF02381 MraZ protein, putative antitoxin-like CFSAN000658_RS09375 PF01795 MraW methylase family CFSAN000658_RS09380 PF04999 Cell division protein FtsL CFSAN000658_RS09385 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS09385 PF03717 Penicillin-binding Protein dimerisation domain CFSAN000658_RS09390 PF08245 Mur ligase middle domain CFSAN000658_RS09390 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS09390 PF01225 Mur ligase family, catalytic domain CFSAN000658_RS09395 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS09395 PF08245 Mur ligase middle domain CFSAN000658_RS09395 PF01225 Mur ligase family, catalytic domain CFSAN000658_RS09400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CFSAN000658_RS09400 PF00953 Glycosyl transferase family 4 CFSAN000658_RS09405 PF08245 Mur ligase middle domain CFSAN000658_RS09405 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS09410 PF01098 Cell cycle protein CFSAN000658_RS09415 PF04101 Glycosyltransferase family 28 C-terminal domain CFSAN000658_RS09415 PF03033 Glycosyltransferase family 28 N-terminal domain CFSAN000658_RS09420 PF01225 Mur ligase family, catalytic domain CFSAN000658_RS09420 PF08245 Mur ligase middle domain CFSAN000658_RS09420 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS09425 PF01820 D-ala D-ala ligase N-terminus CFSAN000658_RS09425 PF07478 D-ala D-ala ligase C-terminus CFSAN000658_RS09430 PF03799 Cell division protein FtsQ CFSAN000658_RS09430 PF08478 POTRA domain, FtsQ-type CFSAN000658_RS09435 PF02491 SHS2 domain inserted in FTSA CFSAN000658_RS09440 PF00091 Tubulin/FtsZ family, GTPase domain CFSAN000658_RS09440 PF12327 FtsZ family, C-terminal domain CFSAN000658_RS09445 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CFSAN000658_RS09450 PF06558 Secretion monitor precursor protein (SecM) CFSAN000658_RS09455 PF02810 SEC-C motif CFSAN000658_RS09455 PF07517 SecA DEAD-like domain CFSAN000658_RS09455 PF01043 SecA preprotein cross-linking domain CFSAN000658_RS09455 PF07516 SecA Wing and Scaffold domain CFSAN000658_RS09460 PF00293 NUDIX domain CFSAN000658_RS09470 PF03884 DNA gyrase inhibitor YacG CFSAN000658_RS09475 PF07072 Cell division protein CFSAN000658_RS09480 PF01121 Dephospho-CoA kinase CFSAN000658_RS09485 PF00478 IMP dehydrogenase / GMP reductase domain CFSAN000658_RS09490 PF00482 Type II secretion system (T2SS), protein F CFSAN000658_RS09495 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CFSAN000658_RS09495 PF00437 Type II/IV secretion system protein CFSAN000658_RS09500 PF07963 Prokaryotic N-terminal methylation motif CFSAN000658_RS09505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFSAN000658_RS09505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CFSAN000658_RS09510 PF01510 N-acetylmuramoyl-L-alanine amidase CFSAN000658_RS09515 PF17113 Regulatory signalling modulator protein AmpE CFSAN000658_RS09520 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CFSAN000658_RS09520 PF04616 Glycosyl hydrolases family 43 CFSAN000658_RS09530 PF00324 Amino acid permease CFSAN000658_RS09535 PF07729 FCD domain CFSAN000658_RS09535 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS09540 PF17831 Pyruvate dehydrogenase E1 component middle domain CFSAN000658_RS09540 PF00456 Transketolase, thiamine diphosphate binding domain CFSAN000658_RS09545 PF02817 e3 binding domain CFSAN000658_RS09545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFSAN000658_RS09545 PF00364 Biotin-requiring enzyme CFSAN000658_RS09550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFSAN000658_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS09565 PF11737 Protein of unknown function (DUF3300) CFSAN000658_RS09570 PF06434 Aconitate hydratase 2 N-terminus CFSAN000658_RS09570 PF00330 Aconitase family (aconitate hydratase) CFSAN000658_RS09570 PF11791 Aconitate B N-terminal domain CFSAN000658_RS09575 PF06062 Uncharacterised protein family (UPF0231) CFSAN000658_RS09580 PF03812 2-keto-3-deoxygluconate permease CFSAN000658_RS09585 PF17042 Nucleotide-binding C-terminal domain CFSAN000658_RS09585 PF07005 Sugar-binding N-terminal domain CFSAN000658_RS09590 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFSAN000658_RS09595 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS09595 PF00455 DeoR C terminal sensor domain CFSAN000658_RS09600 PF02675 S-adenosylmethionine decarboxylase CFSAN000658_RS09605 PF17284 Spermidine synthase tetramerisation domain CFSAN000658_RS09610 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CFSAN000658_RS09615 PF07732 Multicopper oxidase CFSAN000658_RS09615 PF07731 Multicopper oxidase CFSAN000658_RS09615 PF00394 Multicopper oxidase CFSAN000658_RS09620 PF01011 PQQ enzyme repeat CFSAN000658_RS09625 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS09630 PF00484 Carbonic anhydrase CFSAN000658_RS09635 PF00005 ABC transporter CFSAN000658_RS09640 PF01061 ABC-2 type transporter CFSAN000658_RS09645 PF00419 Fimbrial protein CFSAN000658_RS09650 PF13954 PapC N-terminal domain CFSAN000658_RS09650 PF13953 PapC C-terminal domain CFSAN000658_RS09650 PF00577 Outer membrane usher protein CFSAN000658_RS09655 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS09655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS09665 PF03610 PTS system fructose IIA component CFSAN000658_RS09670 PF01522 Polysaccharide deacetylase CFSAN000658_RS09675 PF02261 Aspartate decarboxylase CFSAN000658_RS09680 PF02569 Pantoate-beta-alanine ligase CFSAN000658_RS09685 PF02548 Ketopantoate hydroxymethyltransferase CFSAN000658_RS09690 PF00419 Fimbrial protein CFSAN000658_RS09695 PF00419 Fimbrial protein CFSAN000658_RS09700 PF00419 Fimbrial protein CFSAN000658_RS09705 PF00419 Fimbrial protein CFSAN000658_RS09710 PF00577 Outer membrane usher protein CFSAN000658_RS09710 PF13953 PapC C-terminal domain CFSAN000658_RS09710 PF13954 PapC N-terminal domain CFSAN000658_RS09715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS09715 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS09725 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CFSAN000658_RS09730 PF12627 Probable RNA and SrmB- binding site of polymerase A CFSAN000658_RS09730 PF12626 Polymerase A arginine-rich C-terminus CFSAN000658_RS09730 PF01743 Poly A polymerase head domain CFSAN000658_RS09735 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFSAN000658_RS09740 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFSAN000658_RS09745 PF17746 SfsA N-terminal OB domain CFSAN000658_RS09745 PF03749 Sugar fermentation stimulation protein RE domain CFSAN000658_RS09750 PF02834 LigT like Phosphoesterase CFSAN000658_RS09755 PF08482 ATP-dependent helicase C-terminal CFSAN000658_RS09755 PF00270 DEAD/DEAH box helicase CFSAN000658_RS09755 PF04408 Helicase associated domain (HA2) CFSAN000658_RS09755 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS09760 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS09760 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CFSAN000658_RS09760 PF00912 Transglycosylase CFSAN000658_RS09760 PF14814 Bifunctional transglycosylase second domain CFSAN000658_RS09765 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS09765 PF00593 TonB dependent receptor CFSAN000658_RS09770 PF00005 ABC transporter CFSAN000658_RS09775 PF01497 Periplasmic binding protein CFSAN000658_RS09780 PF01032 FecCD transport family CFSAN000658_RS09785 PF00202 Aminotransferase class-III CFSAN000658_RS09790 PF00654 Voltage gated chloride channel CFSAN000658_RS09795 PF01521 Iron-sulphur cluster biosynthesis CFSAN000658_RS09800 PF03458 UPF0126 domain CFSAN000658_RS09805 PF01497 Periplasmic binding protein CFSAN000658_RS09810 PF01048 Phosphorylase superfamily CFSAN000658_RS09815 PF13286 Phosphohydrolase-associated domain CFSAN000658_RS09815 PF01966 HD domain CFSAN000658_RS09820 PF00595 PDZ domain CFSAN000658_RS09825 PF05651 Putative sugar diacid recognition CFSAN000658_RS09825 PF13556 PucR C-terminal helix-turn-helix domain CFSAN000658_RS09825 PF17853 GGDEF-like domain CFSAN000658_RS09835 PF11944 Protein of unknown function (DUF3461) CFSAN000658_RS09840 PF07690 Major Facilitator Superfamily CFSAN000658_RS09840 PF00083 Sugar (and other) transporter CFSAN000658_RS09845 PF14602 Hexapeptide repeat of succinyl-transferase CFSAN000658_RS09845 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS09845 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CFSAN000658_RS09850 PF01909 Nucleotidyltransferase domain CFSAN000658_RS09850 PF01842 ACT domain CFSAN000658_RS09850 PF08335 GlnD PII-uridylyltransferase CFSAN000658_RS09850 PF01966 HD domain CFSAN000658_RS09855 PF00557 Metallopeptidase family M24 CFSAN000658_RS09860 PF00318 Ribosomal protein S2 CFSAN000658_RS09865 PF00889 Elongation factor TS CFSAN000658_RS09870 PF00696 Amino acid kinase family CFSAN000658_RS09875 PF01765 Ribosome recycling factor CFSAN000658_RS09880 PF13288 DXP reductoisomerase C-terminal domain CFSAN000658_RS09880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFSAN000658_RS09880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CFSAN000658_RS09885 PF01255 Putative undecaprenyl diphosphate synthase CFSAN000658_RS09895 PF02163 Peptidase family M50 CFSAN000658_RS09895 PF17820 PDZ domain CFSAN000658_RS09900 PF07244 Surface antigen variable number repeat CFSAN000658_RS09900 PF01103 Surface antigen CFSAN000658_RS09905 PF03938 Outer membrane protein (OmpH-like) CFSAN000658_RS09910 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS09910 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CFSAN000658_RS09915 PF07977 FabA-like domain CFSAN000658_RS09920 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS09920 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CFSAN000658_RS09925 PF02684 Lipid-A-disaccharide synthetase CFSAN000658_RS09930 PF01351 Ribonuclease HII CFSAN000658_RS09935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFSAN000658_RS09935 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFSAN000658_RS09935 PF14579 Helix-hairpin-helix motif CFSAN000658_RS09935 PF02811 PHP domain CFSAN000658_RS09935 PF01336 OB-fold nucleic acid binding domain CFSAN000658_RS09940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CFSAN000658_RS09950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFSAN000658_RS09950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CFSAN000658_RS09950 PF01276 Orn/Lys/Arg decarboxylase, major domain CFSAN000658_RS09955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFSAN000658_RS09960 PF11734 TilS substrate C-terminal domain CFSAN000658_RS09960 PF01171 PP-loop family CFSAN000658_RS09960 PF09179 TilS substrate binding domain CFSAN000658_RS09965 PF07073 Modulator of Rho-dependent transcription termination (ROF) CFSAN000658_RS09970 PF06786 Uncharacterised protein family (UPF0253) CFSAN000658_RS09975 PF07152 YaeQ protein CFSAN000658_RS09980 PF00472 RF-1 domain CFSAN000658_RS09985 PF17185 NlpE C-terminal OB domain CFSAN000658_RS09985 PF04170 NlpE N-terminal domain CFSAN000658_RS09990 PF04073 Aminoacyl-tRNA editing domain CFSAN000658_RS09990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFSAN000658_RS09990 PF03129 Anticodon binding domain CFSAN000658_RS09995 PF01980 tRNA-methyltransferase O CFSAN000658_RS09995 PF18389 TrmO C-terminal domain CFSAN000658_RS10000 PF16358 RcsF lipoprotein CFSAN000658_RS10005 PF03180 NLPA lipoprotein CFSAN000658_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS10015 PF00005 ABC transporter CFSAN000658_RS10015 PF09383 NIL domain CFSAN000658_RS10055 PF00248 Aldo/keto reductase family CFSAN000658_RS10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS10060 PF03466 LysR substrate binding domain CFSAN000658_RS10065 PF07690 Major Facilitator Superfamily CFSAN000658_RS10070 PF03372 Endonuclease/Exonuclease/phosphatase family CFSAN000658_RS10075 PF08241 Methyltransferase domain CFSAN000658_RS10080 PF01476 LysM domain CFSAN000658_RS10080 PF01464 Transglycosylase SLT domain CFSAN000658_RS10085 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFSAN000658_RS10085 PF00753 Metallo-beta-lactamase superfamily CFSAN000658_RS10090 PF08241 Methyltransferase domain CFSAN000658_RS10095 PF00075 RNase H CFSAN000658_RS10100 PF00929 Exonuclease CFSAN000658_RS10120 PF05947 Type VI secretion system, TssF CFSAN000658_RS10125 PF04965 Gene 25-like lysozyme CFSAN000658_RS10145 PF07724 AAA domain (Cdc48 subfamily) CFSAN000658_RS10145 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS10145 PF10431 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS10145 PF17871 AAA lid domain CFSAN000658_RS10160 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CFSAN000658_RS10165 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CFSAN000658_RS10205 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CFSAN000658_RS10210 PF00691 OmpA family CFSAN000658_RS10210 PF05736 OprF membrane domain CFSAN000658_RS10225 PF06744 Type VI secretion protein IcmF C-terminal CFSAN000658_RS10225 PF06761 Intracellular multiplication and human macrophage-killing CFSAN000658_RS10225 PF14331 ImcF-related N-terminal domain CFSAN000658_RS10245 PF04717 Type VI secretion system, phage-baseplate injector CFSAN000658_RS10255 PF03527 RHS protein CFSAN000658_RS10305 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS10305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS10310 PF13954 PapC N-terminal domain CFSAN000658_RS10310 PF13953 PapC C-terminal domain CFSAN000658_RS10310 PF00577 Outer membrane usher protein CFSAN000658_RS10335 PF03466 LysR substrate binding domain CFSAN000658_RS10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS10350 PF01695 IstB-like ATP binding protein CFSAN000658_RS10380 PF01037 Lrp/AsnC ligand binding domain CFSAN000658_RS10380 PF13404 AsnC-type helix-turn-helix domain CFSAN000658_RS10395 PF13505 Outer membrane protein beta-barrel domain CFSAN000658_RS10405 PF00795 Carbon-nitrogen hydrolase CFSAN000658_RS10410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFSAN000658_RS10410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS10410 PF02770 Acyl-CoA dehydrogenase, middle domain CFSAN000658_RS10410 PF09317 Domain of unknown function (DUF1974) CFSAN000658_RS10415 PF13580 SIS domain CFSAN000658_RS10420 PF13230 Glutamine amidotransferases class-II CFSAN000658_RS10425 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS10430 PF11798 IMS family HHH motif CFSAN000658_RS10430 PF00817 impB/mucB/samB family CFSAN000658_RS10430 PF11799 impB/mucB/samB family C-terminal domain CFSAN000658_RS10440 PF00472 RF-1 domain CFSAN000658_RS10445 PF07687 Peptidase dimerisation domain CFSAN000658_RS10445 PF01546 Peptidase family M20/M25/M40 CFSAN000658_RS10450 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS10455 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CFSAN000658_RS10460 PF07417 Sigma factor-binding transcriptional regulator Crl CFSAN000658_RS10465 PF00267 Gram-negative porin CFSAN000658_RS10470 PF00696 Amino acid kinase family CFSAN000658_RS10470 PF01472 PUA domain CFSAN000658_RS10475 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS10490 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS10490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS10500 PF00577 Outer membrane usher protein CFSAN000658_RS10500 PF13954 PapC N-terminal domain CFSAN000658_RS10500 PF13953 PapC C-terminal domain CFSAN000658_RS10505 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS10505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS10510 PF16970 Type-1 fimbrial protein, A CFSAN000658_RS10525 PF00563 EAL domain CFSAN000658_RS10525 PF12792 CSS motif domain associated with EAL CFSAN000658_RS10540 PF13505 Outer membrane protein beta-barrel domain CFSAN000658_RS10560 PF02321 Outer membrane efflux protein CFSAN000658_RS10565 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS10570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS10575 PF00403 Heavy-metal-associated domain CFSAN000658_RS10580 PF09278 MerR, DNA binding CFSAN000658_RS10580 PF00376 MerR family regulatory protein CFSAN000658_RS10595 PF07690 Major Facilitator Superfamily CFSAN000658_RS10600 PF18273 Type III R-M EcoP15I C-terminal domain CFSAN000658_RS10600 PF01555 DNA methylase CFSAN000658_RS10605 PF08774 VRR-NUC domain CFSAN000658_RS10605 PF04851 Type III restriction enzyme, res subunit CFSAN000658_RS10615 PF01654 Cytochrome bd terminal oxidase subunit I CFSAN000658_RS10620 PF02322 Cytochrome bd terminal oxidase subunit II CFSAN000658_RS10635 PF00593 TonB dependent receptor CFSAN000658_RS10635 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS10640 PF01810 LysE type translocator CFSAN000658_RS10645 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS10650 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS10650 PF06506 Propionate catabolism activator CFSAN000658_RS10650 PF00158 Sigma-54 interaction domain CFSAN000658_RS10660 PF00285 Citrate synthase, C-terminal domain CFSAN000658_RS10665 PF03972 MmgE/PrpD family CFSAN000658_RS10670 PF00501 AMP-binding enzyme CFSAN000658_RS10670 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS10670 PF16177 Acetyl-coenzyme A synthetase N-terminus CFSAN000658_RS10675 PF00490 Delta-aminolevulinic acid dehydratase CFSAN000658_RS10680 PF03797 Autotransporter beta-domain CFSAN000658_RS10685 PF15977 Winged helix-turn-helix DNA binding CFSAN000658_RS10690 PF00144 Beta-lactamase CFSAN000658_RS10695 PF05992 SbmA/BacA-like family CFSAN000658_RS10700 PF07759 Protein of unknown function (DUF1615) CFSAN000658_RS10705 PF10954 Protein of unknown function (DUF2755) CFSAN000658_RS10710 PF10953 Protein of unknown function (DUF2754) CFSAN000658_RS10715 PF01820 D-ala D-ala ligase N-terminus CFSAN000658_RS10715 PF07478 D-ala D-ala ligase C-terminus CFSAN000658_RS10725 PF07690 Major Facilitator Superfamily CFSAN000658_RS10730 PF10796 Sigma-S stabilisation anti-adaptor protein CFSAN000658_RS10735 PF07769 psiF repeat CFSAN000658_RS10740 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS10740 PF05230 MASE2 domain CFSAN000658_RS10745 PF03807 NADP oxidoreductase coenzyme F420-dependent CFSAN000658_RS10745 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFSAN000658_RS10750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CFSAN000658_RS10755 PF01202 Shikimate kinase CFSAN000658_RS10760 PF16362 YaiA protein CFSAN000658_RS10765 PF07302 AroM protein CFSAN000658_RS10770 PF06865 Pyrimidine/purine nucleoside phosphorylase CFSAN000658_RS10775 PF04381 Putative exonuclease, RdgC CFSAN000658_RS10780 PF00480 ROK family CFSAN000658_RS10785 PF07690 Major Facilitator Superfamily CFSAN000658_RS10790 PF13476 AAA domain CFSAN000658_RS10795 PF12320 Type 5 capsule protein repressor C-terminal domain CFSAN000658_RS10795 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS10805 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS10805 PF00072 Response regulator receiver domain CFSAN000658_RS10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS10810 PF11808 Phosphate regulon sensor protein PhoR CFSAN000658_RS10810 PF00989 PAS fold CFSAN000658_RS10810 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS10815 PF05525 Branched-chain amino acid transport protein CFSAN000658_RS10820 PF00324 Amino acid permease CFSAN000658_RS10825 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS10825 PF02903 Alpha amylase, N-terminal ig-like domain CFSAN000658_RS10830 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFSAN000658_RS10830 PF00578 AhpC/TSA family CFSAN000658_RS10835 PF04336 Acyl carrier protein phosphodiesterase CFSAN000658_RS10840 PF02547 Queuosine biosynthesis protein CFSAN000658_RS10845 PF01702 Queuine tRNA-ribosyltransferase CFSAN000658_RS10850 PF02699 Preprotein translocase subunit CFSAN000658_RS10855 PF13721 SecD export protein N-terminal TM region CFSAN000658_RS10855 PF02355 Protein export membrane protein CFSAN000658_RS10855 PF07549 SecD/SecF GG Motif CFSAN000658_RS10860 PF07549 SecD/SecF GG Motif CFSAN000658_RS10860 PF02355 Protein export membrane protein CFSAN000658_RS10865 PF01844 HNH endonuclease CFSAN000658_RS10875 PF03502 Nucleoside-specific channel-forming protein, Tsx CFSAN000658_RS10880 PF11622 Protein of unknown function (DUF3251) CFSAN000658_RS10885 PF03477 ATP cone domain CFSAN000658_RS10890 PF01872 RibD C-terminal domain CFSAN000658_RS10890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFSAN000658_RS10895 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFSAN000658_RS10900 PF01029 NusB family CFSAN000658_RS10905 PF02769 AIR synthase related protein, C-terminal domain CFSAN000658_RS10905 PF00586 AIR synthase related protein, N-terminal domain CFSAN000658_RS10910 PF04608 Phosphatidylglycerophosphatase A CFSAN000658_RS10915 PF00248 Aldo/keto reductase family CFSAN000658_RS10920 PF02779 Transketolase, pyrimidine binding domain CFSAN000658_RS10920 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFSAN000658_RS10920 PF02780 Transketolase, C-terminal domain CFSAN000658_RS10925 PF00348 Polyprenyl synthetase CFSAN000658_RS10930 PF02609 Exonuclease VII small subunit CFSAN000658_RS10935 PF02926 THUMP domain CFSAN000658_RS10935 PF02568 Thiamine biosynthesis protein (ThiI) CFSAN000658_RS10940 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS10945 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS10950 PF00005 ABC transporter CFSAN000658_RS10950 PF08402 TOBE domain CFSAN000658_RS10955 PF01547 Bacterial extracellular solute-binding protein CFSAN000658_RS10960 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS10960 PF07702 UTRA domain CFSAN000658_RS10965 PF00266 Aminotransferase class-V CFSAN000658_RS10975 PF01965 DJ-1/PfpI family CFSAN000658_RS10980 PF08546 Ketopantoate reductase PanE/ApbA C terminal CFSAN000658_RS10980 PF02558 Ketopantoate reductase PanE/ApbA CFSAN000658_RS10985 PF04461 Protein of unknown function (DUF520) CFSAN000658_RS10990 PF07690 Major Facilitator Superfamily CFSAN000658_RS10995 PF01040 UbiA prenyltransferase family CFSAN000658_RS11000 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CFSAN000658_RS11005 PF00510 Cytochrome c oxidase subunit III CFSAN000658_RS11010 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFSAN000658_RS11015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFSAN000658_RS11015 PF06481 COX Aromatic Rich Motif CFSAN000658_RS11020 PF07690 Major Facilitator Superfamily CFSAN000658_RS11025 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CFSAN000658_RS11025 PF03923 Uncharacterized lipoprotein CFSAN000658_RS11030 PF01722 BolA-like protein CFSAN000658_RS11035 PF05698 Bacterial trigger factor protein (TF) C-terminus CFSAN000658_RS11035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFSAN000658_RS11035 PF05697 Bacterial trigger factor protein (TF) CFSAN000658_RS11040 PF00574 Clp protease CFSAN000658_RS11045 PF10431 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS11045 PF06689 ClpX C4-type zinc finger CFSAN000658_RS11045 PF07724 AAA domain (Cdc48 subfamily) CFSAN000658_RS11050 PF05362 Lon protease (S16) C-terminal proteolytic domain CFSAN000658_RS11050 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS11050 PF02190 ATP-dependent protease La (LON) substrate-binding domain CFSAN000658_RS11055 PF00216 Bacterial DNA-binding protein CFSAN000658_RS11060 PF13145 PPIC-type PPIASE domain CFSAN000658_RS11075 PF06508 Queuosine biosynthesis protein QueC CFSAN000658_RS11080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS11080 PF12793 Sugar transport-related sRNA regulator N-term CFSAN000658_RS11095 PF13404 AsnC-type helix-turn-helix domain CFSAN000658_RS11095 PF01037 Lrp/AsnC ligand binding domain CFSAN000658_RS11100 PF00005 ABC transporter CFSAN000658_RS11100 PF00664 ABC transporter transmembrane region CFSAN000658_RS11105 PF00005 ABC transporter CFSAN000658_RS11105 PF00664 ABC transporter transmembrane region CFSAN000658_RS11110 PF00543 Nitrogen regulatory protein P-II CFSAN000658_RS11115 PF00909 Ammonium Transporter Family CFSAN000658_RS11125 PF09619 Type III secretion system lipoprotein chaperone (YscW) CFSAN000658_RS11130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFSAN000658_RS11135 PF12792 CSS motif domain associated with EAL CFSAN000658_RS11135 PF00563 EAL domain CFSAN000658_RS11140 PF01197 Ribosomal protein L31 CFSAN000658_RS11145 PF00444 Ribosomal protein L36 CFSAN000658_RS11150 PF10777 Inner membrane protein YlaC CFSAN000658_RS11155 PF12464 Maltose acetyltransferase CFSAN000658_RS11155 PF14602 Hexapeptide repeat of succinyl-transferase CFSAN000658_RS11160 PF05321 Haemolysin expression modulating protein CFSAN000658_RS11165 PF10757 Biofilm formation regulator YbaJ CFSAN000658_RS11170 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS11175 PF00529 HlyD membrane-fusion protein of T1SS CFSAN000658_RS11175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS11180 PF08361 MAATS-type transcriptional repressor, C-terminal region CFSAN000658_RS11180 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS11185 PF00924 Mechanosensitive ion channel CFSAN000658_RS11185 PF12794 Mechanosensitive ion channel inner membrane domain 1 CFSAN000658_RS11185 PF12795 Mechanosensitive ion channel porin domain CFSAN000658_RS11190 PF04754 Putative transposase, YhgA-like CFSAN000658_RS11195 PF10689 Protein of unknown function (DUF2496) CFSAN000658_RS11200 PF07445 Primosomal replication protein priC CFSAN000658_RS11205 PF04304 Protein of unknown function (DUF454) CFSAN000658_RS11210 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS11215 PF12169 DNA polymerase III subunits gamma and tau domain III CFSAN000658_RS11215 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CFSAN000658_RS11215 PF12170 DNA polymerase III tau subunit V interacting with alpha CFSAN000658_RS11220 PF02575 YbaB/EbfC DNA-binding family CFSAN000658_RS11225 PF02132 RecR protein CFSAN000658_RS11225 PF13662 Toprim domain CFSAN000658_RS11230 PF00183 Hsp90 protein CFSAN000658_RS11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS11235 PF05191 Adenylate kinase, active site lid CFSAN000658_RS11240 PF00762 Ferrochelatase CFSAN000658_RS11245 PF07859 alpha/beta hydrolase fold CFSAN000658_RS11250 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS11255 PF02254 TrkA-N domain CFSAN000658_RS11255 PF00999 Sodium/hydrogen exchanger family CFSAN000658_RS11260 PF07690 Major Facilitator Superfamily CFSAN000658_RS11265 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS11265 PF02872 5'-nucleotidase, C-terminal domain CFSAN000658_RS11270 PF04073 Aminoacyl-tRNA editing domain CFSAN000658_RS11275 PF01963 TraB family CFSAN000658_RS11285 PF00403 Heavy-metal-associated domain CFSAN000658_RS11290 PF13411 MerR HTH family regulatory protein CFSAN000658_RS11295 PF01957 NfeD-like C-terminal, partner-binding CFSAN000658_RS11300 PF01145 SPFH domain / Band 7 family CFSAN000658_RS11300 PF16200 C-terminal region of band_7 CFSAN000658_RS11305 PF00005 ABC transporter CFSAN000658_RS11310 PF03649 Uncharacterised protein family (UPF0014) CFSAN000658_RS11315 PF00085 Thioredoxin CFSAN000658_RS11320 PF00106 short chain dehydrogenase CFSAN000658_RS11325 PF13472 GDSL-like Lipase/Acylhydrolase family CFSAN000658_RS11330 PF00005 ABC transporter CFSAN000658_RS11345 PF03180 NLPA lipoprotein CFSAN000658_RS11350 PF00005 ABC transporter CFSAN000658_RS11350 PF09383 NIL domain CFSAN000658_RS11355 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS11365 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CFSAN000658_RS11365 PF02222 ATP-grasp domain CFSAN000658_RS11370 PF00731 AIR carboxylase CFSAN000658_RS11375 PF12850 Calcineurin-like phosphoesterase superfamily domain CFSAN000658_RS11380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFSAN000658_RS11385 PF09190 DALR domain CFSAN000658_RS11385 PF01406 tRNA synthetases class I (C) catalytic domain CFSAN000658_RS11400 PF04307 LexA-binding, inner membrane-associated putative hydrolase CFSAN000658_RS11410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFSAN000658_RS11410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFSAN000658_RS11415 PF00419 Fimbrial protein CFSAN000658_RS11430 PF13953 PapC C-terminal domain CFSAN000658_RS11430 PF13954 PapC N-terminal domain CFSAN000658_RS11430 PF00577 Outer membrane usher protein CFSAN000658_RS11435 PF00419 Fimbrial protein CFSAN000658_RS11440 PF00419 Fimbrial protein CFSAN000658_RS11445 PF00072 Response regulator receiver domain CFSAN000658_RS11445 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS11460 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS11470 PF00589 Phage integrase family CFSAN000658_RS11475 PF01797 Transposase IS200 like CFSAN000658_RS11485 PF00535 Glycosyl transferase family 2 CFSAN000658_RS11490 PF04138 GtrA-like protein CFSAN000658_RS11500 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS11500 PF00672 HAMP domain CFSAN000658_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS11505 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS11510 PF12833 Helix-turn-helix domain CFSAN000658_RS11510 PF12852 Cupin CFSAN000658_RS11515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFSAN000658_RS11515 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS11520 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS11525 PF04224 Protein of unknown function, DUF417 CFSAN000658_RS11535 PF00324 Amino acid permease CFSAN000658_RS11540 PF00924 Mechanosensitive ion channel CFSAN000658_RS11545 PF00657 GDSL-like Lipase/Acylhydrolase CFSAN000658_RS11545 PF03797 Autotransporter beta-domain CFSAN000658_RS11550 PF00881 Nitroreductase family CFSAN000658_RS11555 PF04237 YjbR CFSAN000658_RS11560 PF16295 Tetracyclin repressor-like, C-terminal domain CFSAN000658_RS11560 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS11565 PF12833 Helix-turn-helix domain CFSAN000658_RS11570 PF06643 Protein of unknown function (DUF1158) CFSAN000658_RS11575 PF04107 Glutamate-cysteine ligase family 2(GCS2) CFSAN000658_RS11580 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CFSAN000658_RS11580 PF01648 4'-phosphopantetheinyl transferase superfamily CFSAN000658_RS11585 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS11585 PF00593 TonB dependent receptor CFSAN000658_RS11590 PF00756 Putative esterase CFSAN000658_RS11590 PF11806 Domain of unknown function (DUF3327) CFSAN000658_RS11595 PF03621 MbtH-like protein CFSAN000658_RS11600 PF00501 AMP-binding enzyme CFSAN000658_RS11600 PF00975 Thioesterase domain CFSAN000658_RS11600 PF00550 Phosphopantetheine attachment site CFSAN000658_RS11600 PF00668 Condensation domain CFSAN000658_RS11600 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS11605 PF02706 Chain length determinant protein CFSAN000658_RS11610 PF00005 ABC transporter CFSAN000658_RS11615 PF01032 FecCD transport family CFSAN000658_RS11620 PF01032 FecCD transport family CFSAN000658_RS11625 PF05977 Transmembrane secretion effector CFSAN000658_RS11630 PF01497 Periplasmic binding protein CFSAN000658_RS11635 PF00425 chorismate binding enzyme CFSAN000658_RS11640 PF00501 AMP-binding enzyme CFSAN000658_RS11640 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS11645 PF00857 Isochorismatase family CFSAN000658_RS11645 PF00550 Phosphopantetheine attachment site CFSAN000658_RS11655 PF03061 Thioesterase superfamily CFSAN000658_RS11660 PF02554 Carbon starvation protein CstA CFSAN000658_RS11660 PF13722 5TM C-terminal transporter carbon starvation CstA CFSAN000658_RS11665 PF04328 Selenoprotein, putative CFSAN000658_RS11670 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS11675 PF00155 Aminotransferase class I and II CFSAN000658_RS11680 PF02195 ParB-like nuclease domain CFSAN000658_RS11685 PF01507 Phosphoadenosine phosphosulfate reductase family CFSAN000658_RS11685 PF11922 Domain of unknown function (DUF3440) CFSAN000658_RS11690 PF03466 LysR substrate binding domain CFSAN000658_RS11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS11695 PF13098 Thioredoxin-like domain CFSAN000658_RS11700 PF00578 AhpC/TSA family CFSAN000658_RS11700 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFSAN000658_RS11705 PF13192 Thioredoxin domain CFSAN000658_RS11705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS11715 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS11715 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS11715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS11720 PF13247 4Fe-4S dicluster domain CFSAN000658_RS11730 PF00582 Universal stress protein family CFSAN000658_RS11735 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS11735 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS11735 PF13823 Alcohol dehydrogenase GroES-associated CFSAN000658_RS11740 PF01272 Transcription elongation factor, GreA/GreB, C-term CFSAN000658_RS11740 PF14760 Rnk N-terminus CFSAN000658_RS11745 PF00445 Ribonuclease T2 family CFSAN000658_RS11750 PF00939 Sodium:sulfate symporter transmembrane region CFSAN000658_RS11755 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CFSAN000658_RS11760 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CFSAN000658_RS11765 PF04223 Citrate lyase, alpha subunit (CitF) CFSAN000658_RS11770 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS11775 PF06857 Malonate decarboxylase delta subunit (MdcD) CFSAN000658_RS11780 PF08218 Citrate lyase ligase C-terminal domain CFSAN000658_RS11785 PF17203 Single cache domain 3 CFSAN000658_RS11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS11785 PF00989 PAS fold CFSAN000658_RS11785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CFSAN000658_RS11790 PF00072 Response regulator receiver domain CFSAN000658_RS11790 PF12431 Transcriptional regulator CFSAN000658_RS11795 PF03606 C4-dicarboxylate anaerobic carrier CFSAN000658_RS11800 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CFSAN000658_RS11805 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS11810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFSAN000658_RS11815 PF00795 Carbon-nitrogen hydrolase CFSAN000658_RS11820 PF02416 mttA/Hcf106 family CFSAN000658_RS11825 PF04055 Radical SAM superfamily CFSAN000658_RS11825 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CFSAN000658_RS11830 PF03466 LysR substrate binding domain CFSAN000658_RS11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS11835 PF03099 Biotin/lipoate A/B protein ligase family CFSAN000658_RS11840 PF04359 Protein of unknown function (DUF493) CFSAN000658_RS11845 PF00768 D-alanyl-D-alanine carboxypeptidase CFSAN000658_RS11845 PF07943 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS11850 PF03330 Lytic transglycolase CFSAN000658_RS11850 PF05036 Sporulation related domain CFSAN000658_RS11855 PF01098 Cell cycle protein CFSAN000658_RS11860 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS11860 PF03717 Penicillin-binding Protein dimerisation domain CFSAN000658_RS11865 PF02590 Predicted SPOUT methyltransferase CFSAN000658_RS11880 PF00300 Histidine phosphatase superfamily (branch 1) CFSAN000658_RS11885 PF00155 Aminotransferase class I and II CFSAN000658_RS11890 PF01467 Cytidylyltransferase-like CFSAN000658_RS11895 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CFSAN000658_RS11895 PF06144 DNA polymerase III, delta subunit CFSAN000658_RS11900 PF04390 Lipopolysaccharide-assembly CFSAN000658_RS11905 PF13603 Leucyl-tRNA synthetase, Domain 2 CFSAN000658_RS11905 PF00133 tRNA synthetases class I (I, L, M and V) CFSAN000658_RS11905 PF08264 Anticodon-binding domain of tRNA CFSAN000658_RS11915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CFSAN000658_RS11920 PF03812 2-keto-3-deoxygluconate permease CFSAN000658_RS11925 PF00989 PAS fold CFSAN000658_RS11925 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS11925 PF00158 Sigma-54 interaction domain CFSAN000658_RS11930 PF07295 Zinc-ribbon containing domain CFSAN000658_RS11935 PF01156 Inosine-uridine preferring nucleoside hydrolase CFSAN000658_RS11940 PF00005 ABC transporter CFSAN000658_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS11955 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS11960 PF00795 Carbon-nitrogen hydrolase CFSAN000658_RS11965 PF03471 Transporter associated domain CFSAN000658_RS11965 PF00571 CBS domain CFSAN000658_RS11970 PF02130 Uncharacterized protein family UPF0054 CFSAN000658_RS11975 PF02562 PhoH-like protein CFSAN000658_RS11980 PF01938 TRAM domain CFSAN000658_RS11980 PF04055 Radical SAM superfamily CFSAN000658_RS11980 PF00919 Uncharacterized protein family UPF0004 CFSAN000658_RS11985 PF01494 FAD binding domain CFSAN000658_RS12025 PF13537 Glutamine amidotransferase domain CFSAN000658_RS12025 PF00733 Asparagine synthase CFSAN000658_RS12030 PF13344 Haloacid dehalogenase-like hydrolase CFSAN000658_RS12035 PF00480 ROK family CFSAN000658_RS12035 PF01047 MarR family CFSAN000658_RS12040 PF01979 Amidohydrolase family CFSAN000658_RS12045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CFSAN000658_RS12050 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS12050 PF00367 phosphotransferase system, EIIB CFSAN000658_RS12050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CFSAN000658_RS12055 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFSAN000658_RS12055 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CFSAN000658_RS12060 PF03573 outer membrane porin, OprD family CFSAN000658_RS12065 PF13982 YbfN-like lipoprotein CFSAN000658_RS12070 PF07690 Major Facilitator Superfamily CFSAN000658_RS12080 PF00890 FAD binding domain CFSAN000658_RS12080 PF14537 Cytochrome c3 CFSAN000658_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS12085 PF03466 LysR substrate binding domain CFSAN000658_RS12090 PF01475 Ferric uptake regulator family CFSAN000658_RS12095 PF00258 Flavodoxin CFSAN000658_RS12100 PF01402 Ribbon-helix-helix protein, copG family CFSAN000658_RS12105 PF12697 Alpha/beta hydrolase family CFSAN000658_RS12110 PF03925 SeqA protein C-terminal domain CFSAN000658_RS12110 PF17206 SeqA protein N-terminal domain CFSAN000658_RS12115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFSAN000658_RS12115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFSAN000658_RS12115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFSAN000658_RS12115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFSAN000658_RS12125 PF13520 Amino acid permease CFSAN000658_RS12130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CFSAN000658_RS12130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFSAN000658_RS12130 PF01276 Orn/Lys/Arg decarboxylase, major domain CFSAN000658_RS12140 PF00072 Response regulator receiver domain CFSAN000658_RS12140 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS12145 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS12145 PF13493 Domain of unknown function (DUF4118) CFSAN000658_RS12145 PF13492 GAF domain CFSAN000658_RS12145 PF02702 Osmosensitive K+ channel His kinase sensor domain CFSAN000658_RS12150 PF02669 K+-transporting ATPase, c chain CFSAN000658_RS12160 PF03814 Potassium-transporting ATPase A subunit CFSAN000658_RS12165 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CFSAN000658_RS12170 PF10725 Protein of unknown function (DUF2517) CFSAN000658_RS12175 PF03441 FAD binding domain of DNA photolyase CFSAN000658_RS12175 PF00875 DNA photolyase CFSAN000658_RS12180 PF00854 POT family CFSAN000658_RS12185 PF01784 NIF3 (NGG1p interacting factor 3) CFSAN000658_RS12190 PF02682 Carboxyltransferase domain, subdomain C and D CFSAN000658_RS12195 PF02626 Carboxyltransferase domain, subdomain A and B CFSAN000658_RS12200 PF03746 LamB/YcsF family CFSAN000658_RS12210 PF00589 Phage integrase family CFSAN000658_RS12225 PF03275 UDP-galactopyranose mutase CFSAN000658_RS12240 PF01061 ABC-2 type transporter CFSAN000658_RS12245 PF00005 ABC transporter CFSAN000658_RS12250 PF17994 Galactofuranosyltransferase 2 N-terminal CFSAN000658_RS12270 PF06827 Zinc finger found in FPG and IleRS CFSAN000658_RS12270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFSAN000658_RS12270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFSAN000658_RS12275 PF05145 Transition state regulatory protein AbrB CFSAN000658_RS12280 PF00285 Citrate synthase, C-terminal domain CFSAN000658_RS12290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFSAN000658_RS12295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFSAN000658_RS12300 PF02910 Fumarate reductase flavoprotein C-term CFSAN000658_RS12300 PF00890 FAD binding domain CFSAN000658_RS12305 PF13085 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS12310 PF16078 2-oxoglutarate dehydrogenase N-terminus CFSAN000658_RS12310 PF02779 Transketolase, pyrimidine binding domain CFSAN000658_RS12310 PF00676 Dehydrogenase E1 component CFSAN000658_RS12310 PF16870 2-oxoglutarate dehydrogenase C-terminal CFSAN000658_RS12315 PF00364 Biotin-requiring enzyme CFSAN000658_RS12315 PF02817 e3 binding domain CFSAN000658_RS12315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFSAN000658_RS12320 PF08442 ATP-grasp domain CFSAN000658_RS12320 PF00549 CoA-ligase CFSAN000658_RS12325 PF02629 CoA binding domain CFSAN000658_RS12325 PF00549 CoA-ligase CFSAN000658_RS12335 PF01654 Cytochrome bd terminal oxidase subunit I CFSAN000658_RS12340 PF02322 Cytochrome bd terminal oxidase subunit II CFSAN000658_RS12345 PF08173 Membrane bound YbgT-like protein CFSAN000658_RS12355 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CFSAN000658_RS12360 PF03061 Thioesterase superfamily CFSAN000658_RS12365 PF01618 MotA/TolQ/ExbB proton channel family CFSAN000658_RS12370 PF02472 Biopolymer transport protein ExbD/TolR CFSAN000658_RS12375 PF06519 TolA C-terminal CFSAN000658_RS12380 PF07676 WD40-like Beta Propeller Repeat CFSAN000658_RS12380 PF04052 TolB amino-terminal domain CFSAN000658_RS12385 PF00691 OmpA family CFSAN000658_RS12390 PF13174 Tetratricopeptide repeat CFSAN000658_RS12390 PF16331 TolA binding protein trimerisation CFSAN000658_RS12420 PF02445 Quinolinate synthetase A protein CFSAN000658_RS12425 PF04973 Nicotinamide mononucleotide transporter CFSAN000658_RS12430 PF01545 Cation efflux family CFSAN000658_RS12435 PF13985 YbgS-like protein CFSAN000658_RS12440 PF00793 DAHP synthetase I family CFSAN000658_RS12445 PF01032 FecCD transport family CFSAN000658_RS12450 PF00005 ABC transporter CFSAN000658_RS12455 PF00300 Histidine phosphatase superfamily (branch 1) CFSAN000658_RS12460 PF01263 Aldose 1-epimerase CFSAN000658_RS12465 PF10509 Galactokinase galactose-binding signature CFSAN000658_RS12465 PF08544 GHMP kinases C terminal CFSAN000658_RS12465 PF00288 GHMP kinases N terminal domain CFSAN000658_RS12470 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CFSAN000658_RS12470 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CFSAN000658_RS12475 PF16363 GDP-mannose 4,6 dehydratase CFSAN000658_RS12485 PF00005 ABC transporter CFSAN000658_RS12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS12490 PF03459 TOBE domain CFSAN000658_RS12495 PF10766 Multidrug efflux pump-associated protein AcrZ CFSAN000658_RS12505 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12510 PF00005 ABC transporter CFSAN000658_RS12510 PF03459 TOBE domain CFSAN000658_RS12520 PF10282 Lactonase, 7-bladed beta-propeller CFSAN000658_RS12525 PF01095 Pectinesterase CFSAN000658_RS12530 PF01979 Amidohydrolase family CFSAN000658_RS12535 PF00491 Arginase family CFSAN000658_RS12540 PF07702 UTRA domain CFSAN000658_RS12540 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS12545 PF17392 Urocanase C-terminal domain CFSAN000658_RS12545 PF01175 Urocanase Rossmann-like domain CFSAN000658_RS12545 PF17391 Urocanase N-terminal domain CFSAN000658_RS12550 PF00221 Aromatic amino acid lyase CFSAN000658_RS12555 PF01161 Phosphatidylethanolamine-binding protein CFSAN000658_RS12560 PF00202 Aminotransferase class-III CFSAN000658_RS12565 PF06968 Biotin and Thiamin Synthesis associated domain CFSAN000658_RS12565 PF04055 Radical SAM superfamily CFSAN000658_RS12570 PF00155 Aminotransferase class I and II CFSAN000658_RS12575 PF08241 Methyltransferase domain CFSAN000658_RS12585 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS12585 PF17757 UvrB interaction domain CFSAN000658_RS12585 PF12344 Ultra-violet resistance protein B CFSAN000658_RS12585 PF04851 Type III restriction enzyme, res subunit CFSAN000658_RS12585 PF02151 UvrB/uvrC motif CFSAN000658_RS12595 PF14496 C-terminal novel E3 ligase, LRR-interacting CFSAN000658_RS12595 PF12468 Type III secretion system leucine rich repeat protein CFSAN000658_RS12600 PF01933 Uncharacterised protein family UPF0052 CFSAN000658_RS12605 PF06463 Molybdenum Cofactor Synthesis C CFSAN000658_RS12605 PF04055 Radical SAM superfamily CFSAN000658_RS12610 PF00994 Probable molybdopterin binding domain CFSAN000658_RS12615 PF01967 MoaC family CFSAN000658_RS12620 PF02597 ThiS family CFSAN000658_RS12625 PF02391 MoaE protein CFSAN000658_RS12630 PF01027 Inhibitor of apoptosis-promoting Bax1 CFSAN000658_RS12645 PF03706 Lysylphosphatidylglycerol synthase TM region CFSAN000658_RS12650 PF13091 PLD-like domain CFSAN000658_RS12655 PF03372 Endonuclease/Exonuclease/phosphatase family CFSAN000658_RS12660 PF11076 Putative inner membrane protein YbhQ CFSAN000658_RS12675 PF00005 ABC transporter CFSAN000658_RS12680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS12685 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS12685 PF09209 Tetracyclin repressor-like, C-terminal domain CFSAN000658_RS12690 PF00270 DEAD/DEAH box helicase CFSAN000658_RS12690 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS12695 PF13307 Helicase C-terminal domain CFSAN000658_RS12695 PF06733 DEAD_2 CFSAN000658_RS12700 PF02885 Glycosyl transferase family, helical bundle domain CFSAN000658_RS12705 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS12715 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFSAN000658_RS12720 PF05971 RNA methyltransferase CFSAN000658_RS12725 PF00924 Mechanosensitive ion channel CFSAN000658_RS12730 PF00005 ABC transporter CFSAN000658_RS12735 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12740 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS12745 PF00210 Ferritin-like domain CFSAN000658_RS12750 PF00892 EamA-like transporter family CFSAN000658_RS12755 PF13505 Outer membrane protein beta-barrel domain CFSAN000658_RS12760 PF00884 Sulfatase CFSAN000658_RS12765 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFSAN000658_RS12765 PF02742 Iron dependent repressor, metal binding and dimerisation domain CFSAN000658_RS12770 PF03600 Citrate transporter CFSAN000658_RS12775 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS12775 PF17969 L,D-transpeptidase C-terminal domain CFSAN000658_RS12780 PF00005 ABC transporter CFSAN000658_RS12780 PF12848 ABC transporter CFSAN000658_RS12785 PF07350 Protein of unknown function (DUF1479) CFSAN000658_RS12795 PF01228 Glycine radical CFSAN000658_RS12795 PF02901 Pyruvate formate lyase-like CFSAN000658_RS12800 PF04055 Radical SAM superfamily CFSAN000658_RS12805 PF00899 ThiF family CFSAN000658_RS12810 PF03453 MoeA N-terminal region (domain I and II) CFSAN000658_RS12810 PF03454 MoeA C-terminal region (domain IV) CFSAN000658_RS12810 PF00994 Probable molybdopterin binding domain CFSAN000658_RS12815 PF01112 Asparaginase CFSAN000658_RS12820 PF00005 ABC transporter CFSAN000658_RS12820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS12825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS12830 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12835 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12835 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS12840 PF00919 Uncharacterized protein family UPF0004 CFSAN000658_RS12840 PF18693 TRAM domain CFSAN000658_RS12840 PF04055 Radical SAM superfamily CFSAN000658_RS12845 PF10799 Biofilm formation protein (YliH/bssR) CFSAN000658_RS12850 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS12855 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS12860 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS12860 PF00766 Electron transfer flavoprotein FAD-binding domain CFSAN000658_RS12870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFSAN000658_RS12870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS12870 PF02770 Acyl-CoA dehydrogenase, middle domain CFSAN000658_RS12880 PF03466 LysR substrate binding domain CFSAN000658_RS12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS12890 PF07995 Glucose / Sorbosone dehydrogenase CFSAN000658_RS12895 PF00043 Glutathione S-transferase, C-terminal domain CFSAN000658_RS12895 PF13417 Glutathione S-transferase, N-terminal domain CFSAN000658_RS12900 PF07943 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS12900 PF00768 D-alanyl-D-alanine carboxypeptidase CFSAN000658_RS12905 PF00455 DeoR C terminal sensor domain CFSAN000658_RS12905 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS12910 PF01569 PAP2 superfamily CFSAN000658_RS12915 PF07690 Major Facilitator Superfamily CFSAN000658_RS12925 PF07690 Major Facilitator Superfamily CFSAN000658_RS12930 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS12935 PF02080 TrkA-C domain CFSAN000658_RS12935 PF06826 Predicted Permease Membrane Region CFSAN000658_RS12940 PF11045 Putative inner membrane protein of Enterobacteriaceae CFSAN000658_RS12945 PF00462 Glutaredoxin CFSAN000658_RS12950 PF07214 Protein of unknown function (DUF1418) CFSAN000658_RS12955 PF00881 Nitroreductase family CFSAN000658_RS12960 PF08443 RimK-like ATP-grasp domain CFSAN000658_RS12960 PF18030 RimK PreATP-grasp domain CFSAN000658_RS12965 PF10722 Putative bacterial sensory transduction regulator CFSAN000658_RS12970 PF13416 Bacterial extracellular solute-binding protein CFSAN000658_RS12975 PF00005 ABC transporter CFSAN000658_RS12975 PF08402 TOBE domain CFSAN000658_RS12980 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12985 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS12990 PF10767 Protein of unknown function (DUF2593) CFSAN000658_RS12995 PF05958 tRNA (Uracil-5-)-methyltransferase CFSAN000658_RS13000 PF03611 PTS system sugar-specific permease component CFSAN000658_RS13015 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS13030 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS13035 PF00005 ABC transporter CFSAN000658_RS13040 PF12883 Protein of unknown function (DUF3828) CFSAN000658_RS13045 PF01906 Putative heavy-metal-binding CFSAN000658_RS13050 PF01510 N-acetylmuramoyl-L-alanine amidase CFSAN000658_RS13055 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS13060 PF11066 Protein of unknown function (DUF2867) CFSAN000658_RS13060 PF13460 NAD(P)H-binding CFSAN000658_RS13065 PF01212 Beta-eliminating lyase CFSAN000658_RS13070 PF00205 Thiamine pyrophosphate enzyme, central domain CFSAN000658_RS13070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS13070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS13075 PF00970 Oxidoreductase FAD-binding domain CFSAN000658_RS13075 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS13075 PF00111 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS13080 PF03063 Prismane/CO dehydrogenase family CFSAN000658_RS13085 PF03956 Lysine exporter LysO CFSAN000658_RS13090 PF11398 Protein of unknown function (DUF2813) CFSAN000658_RS13095 PF04393 Protein of unknown function (DUF535) CFSAN000658_RS13100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS13105 PF12704 MacB-like periplasmic core domain CFSAN000658_RS13105 PF02687 FtsX-like permease family CFSAN000658_RS13105 PF00005 ABC transporter CFSAN000658_RS13110 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS13115 PF02617 ATP-dependent Clp protease adaptor protein ClpS CFSAN000658_RS13120 PF10431 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS13120 PF02861 Clp amino terminal domain, pathogenicity island component CFSAN000658_RS13120 PF17871 AAA lid domain CFSAN000658_RS13120 PF07724 AAA domain (Cdc48 subfamily) CFSAN000658_RS13120 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS13135 PF00857 Isochorismatase family CFSAN000658_RS13140 PF02678 Pirin CFSAN000658_RS13140 PF05726 Pirin C-terminal cupin domain CFSAN000658_RS13145 PF03466 LysR substrate binding domain CFSAN000658_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS13150 PF01176 Translation initiation factor 1A / IF-1 CFSAN000658_RS13160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CFSAN000658_RS13165 PF00005 ABC transporter CFSAN000658_RS13165 PF00664 ABC transporter transmembrane region CFSAN000658_RS13170 PF00664 ABC transporter transmembrane region CFSAN000658_RS13170 PF00005 ABC transporter CFSAN000658_RS13175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS13180 PF01037 Lrp/AsnC ligand binding domain CFSAN000658_RS13185 PF01580 FtsK/SpoIIIE family CFSAN000658_RS13185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CFSAN000658_RS13185 PF17854 FtsK alpha domain CFSAN000658_RS13185 PF09397 Ftsk gamma domain CFSAN000658_RS13190 PF03548 Outer membrane lipoprotein carrier protein LolA CFSAN000658_RS13195 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS13195 PF16193 AAA C-terminal domain CFSAN000658_RS13195 PF12002 MgsA AAA+ ATPase C terminal CFSAN000658_RS13200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFSAN000658_RS13200 PF02403 Seryl-tRNA synthetase N-terminal domain CFSAN000658_RS13205 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS13205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS13205 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS13210 PF13247 4Fe-4S dicluster domain CFSAN000658_RS13210 PF12800 4Fe-4S binding domain CFSAN000658_RS13215 PF04976 DMSO reductase anchor subunit (DmsC) CFSAN000658_RS13225 PF07690 Major Facilitator Superfamily CFSAN000658_RS13230 PF13520 Amino acid permease CFSAN000658_RS13235 PF04055 Radical SAM superfamily CFSAN000658_RS13245 PF11047 Salmonella outer protein D CFSAN000658_RS13250 PF02901 Pyruvate formate lyase-like CFSAN000658_RS13250 PF01228 Glycine radical CFSAN000658_RS13255 PF01226 Formate/nitrite transporter CFSAN000658_RS13260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CFSAN000658_RS13260 PF18381 YcaO cyclodehydratase C-terminal domain CFSAN000658_RS13265 PF04239 Protein of unknown function (DUF421) CFSAN000658_RS13270 PF00266 Aminotransferase class-V CFSAN000658_RS13275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFSAN000658_RS13280 PF01435 Peptidase family M48 CFSAN000658_RS13285 PF02224 Cytidylate kinase CFSAN000658_RS13290 PF00575 S1 RNA binding domain CFSAN000658_RS13295 PF00216 Bacterial DNA-binding protein CFSAN000658_RS13305 PF13276 HTH-like domain CFSAN000658_RS13305 PF13333 Integrase core domain CFSAN000658_RS13305 PF00665 Integrase core domain CFSAN000658_RS13310 PF00753 Metallo-beta-lactamase superfamily CFSAN000658_RS13310 PF03772 Competence protein CFSAN000658_RS13315 PF00005 ABC transporter CFSAN000658_RS13315 PF00664 ABC transporter transmembrane region CFSAN000658_RS13320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CFSAN000658_RS13325 PF06224 Winged helix DNA-binding domain CFSAN000658_RS13330 PF03966 Trm112p-like protein CFSAN000658_RS13335 PF02348 Cytidylyltransferase CFSAN000658_RS13340 PF01636 Phosphotransferase enzyme family CFSAN000658_RS13345 PF02698 DUF218 domain CFSAN000658_RS13350 PF13847 Methyltransferase domain CFSAN000658_RS13355 PF17192 MukF middle domain CFSAN000658_RS13355 PF17193 MukF C-terminal domain CFSAN000658_RS13355 PF03882 MukF winged-helix domain CFSAN000658_RS13360 PF04288 MukE-like family CFSAN000658_RS13365 PF16330 MukB hinge domain CFSAN000658_RS13365 PF04310 MukB N-terminal CFSAN000658_RS13370 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS13370 PF01471 Putative peptidoglycan binding domain CFSAN000658_RS13375 PF05951 Bacterial protein of unknown function (DUF882) CFSAN000658_RS13380 PF00753 Metallo-beta-lactamase superfamily CFSAN000658_RS13385 PF00155 Aminotransferase class I and II CFSAN000658_RS13390 PF00267 Gram-negative porin CFSAN000658_RS13395 PF01336 OB-fold nucleic acid binding domain CFSAN000658_RS13395 PF00152 tRNA synthetases class II (D, K and N) CFSAN000658_RS13400 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFSAN000658_RS13400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CFSAN000658_RS13405 PF12167 Arm DNA-binding domain CFSAN000658_RS13405 PF00589 Phage integrase family CFSAN000658_RS13425 PF06630 Enterobacterial exodeoxyribonuclease VIII CFSAN000658_RS13425 PF12684 PDDEXK-like domain of unknown function (DUF3799) CFSAN000658_RS13460 PF01695 IstB-like ATP binding protein CFSAN000658_RS13480 PF06183 DinI-like family CFSAN000658_RS13535 PF00182 Chitinase class I CFSAN000658_RS13555 PF04466 Phage terminase large subunit CFSAN000658_RS13555 PF17288 Terminase RNAseH like domain CFSAN000658_RS13685 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CFSAN000658_RS13690 PF07690 Major Facilitator Superfamily CFSAN000658_RS13700 PF06183 DinI-like family CFSAN000658_RS13705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CFSAN000658_RS13705 PF11940 Domain of unknown function (DUF3458) Ig-like fold CFSAN000658_RS13705 PF01433 Peptidase family M1 domain CFSAN000658_RS13710 PF01180 Dihydroorotate dehydrogenase CFSAN000658_RS13715 PF07126 Cell-division protein ZapC CFSAN000658_RS13720 PF03473 MOSC domain CFSAN000658_RS13720 PF03476 MOSC N-terminal beta barrel domain CFSAN000658_RS13720 PF00111 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS13725 PF01170 Putative RNA methylase family UPF0020 CFSAN000658_RS13725 PF10672 S-adenosylmethionine-dependent methyltransferase CFSAN000658_RS13725 PF02926 THUMP domain CFSAN000658_RS13730 PF16326 ABC transporter C-terminal domain CFSAN000658_RS13730 PF00005 ABC transporter CFSAN000658_RS13730 PF12848 ABC transporter CFSAN000658_RS13735 PF04403 Paraquat-inducible protein A CFSAN000658_RS13740 PF02470 MlaD protein CFSAN000658_RS13745 PF03886 ABC-type transport auxiliary lipoprotein component CFSAN000658_RS13750 PF04957 Ribosome modulation factor CFSAN000658_RS13755 PF07977 FabA-like domain CFSAN000658_RS13760 PF05362 Lon protease (S16) C-terminal proteolytic domain CFSAN000658_RS13760 PF13654 AAA domain CFSAN000658_RS13765 PF17414 MatP C-terminal ribbon-helix-helix domain CFSAN000658_RS13765 PF06303 MatP N-terminal domain CFSAN000658_RS13770 PF00691 OmpA family CFSAN000658_RS13770 PF01389 OmpA-like transmembrane domain CFSAN000658_RS13775 PF03846 Cell division inhibitor SulA CFSAN000658_RS13780 PF04993 TfoX N-terminal domain CFSAN000658_RS13780 PF04994 TfoX C-terminal domain CFSAN000658_RS13785 PF12805 FUSC-like inner membrane protein yccS CFSAN000658_RS13790 PF03733 Inner membrane component domain CFSAN000658_RS13795 PF13361 UvrD-like helicase C-terminal domain CFSAN000658_RS13795 PF12462 DNA helicase IV / RNA helicase N terminal CFSAN000658_RS13795 PF00580 UvrD/REP helicase N-terminal domain CFSAN000658_RS13800 PF02142 MGS-like domain CFSAN000658_RS13805 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CFSAN000658_RS13810 PF13380 CoA binding domain CFSAN000658_RS13815 PF08755 Hemimethylated DNA-binding protein YccV like CFSAN000658_RS13820 PF10672 S-adenosylmethionine-dependent methyltransferase CFSAN000658_RS13820 PF17785 PUA-like domain CFSAN000658_RS13825 PF01161 Phosphatidylethanolamine-binding protein CFSAN000658_RS13830 PF12833 Helix-turn-helix domain CFSAN000658_RS13835 PF00708 Acylphosphatase CFSAN000658_RS13840 PF04358 DsrC like protein CFSAN000658_RS13845 PF01027 Inhibitor of apoptosis-promoting Bax1 CFSAN000658_RS13860 PF00805 Pentapeptide repeats (8 copies) CFSAN000658_RS13875 PF07824 Type III secretion chaperone domain CFSAN000658_RS13885 PF13132 Domain of unknown function (DUF3950) CFSAN000658_RS13895 PF03577 Peptidase family C69 CFSAN000658_RS13900 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS13905 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS13905 PF00072 Response regulator receiver domain CFSAN000658_RS13910 PF00576 HIUase/Transthyretin family CFSAN000658_RS13915 PF01613 Flavin reductase like domain CFSAN000658_RS13920 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CFSAN000658_RS13920 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CFSAN000658_RS13925 PF01047 MarR family CFSAN000658_RS13930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFSAN000658_RS13935 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS13940 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CFSAN000658_RS13945 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CFSAN000658_RS13950 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFSAN000658_RS13955 PF03328 HpcH/HpaI aldolase/citrate lyase family CFSAN000658_RS13960 PF07690 Major Facilitator Superfamily CFSAN000658_RS13970 PF12706 Beta-lactamase superfamily domain CFSAN000658_RS13985 PF01556 DnaJ C terminal domain CFSAN000658_RS13985 PF00226 DnaJ domain CFSAN000658_RS13995 PF11412 Disulphide bond corrector protein DsbC CFSAN000658_RS13995 PF02683 Cytochrome C biogenesis protein transmembrane region CFSAN000658_RS13995 PF13098 Thioredoxin-like domain CFSAN000658_RS14000 PF06965 Na+/H+ antiporter 1 CFSAN000658_RS14000 PF13462 Thioredoxin CFSAN000658_RS14005 PF00578 AhpC/TSA family CFSAN000658_RS14010 PF00328 Histidine phosphatase superfamily (branch 2) CFSAN000658_RS14015 PF13993 YccJ-like protein CFSAN000658_RS14020 PF03358 NADPH-dependent FMN reductase CFSAN000658_RS14025 PF10685 Stress-induced bacterial acidophilic repeat motif CFSAN000658_RS14030 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS14030 PF08362 YcdC-like protein, C-terminal region CFSAN000658_RS14040 PF01619 Proline dehydrogenase CFSAN000658_RS14040 PF14850 DNA-binding domain of Proline dehydrogenase CFSAN000658_RS14040 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CFSAN000658_RS14040 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS14045 PF00474 Sodium:solute symporter family CFSAN000658_RS14055 PF02562 PhoH-like protein CFSAN000658_RS14060 PF01380 SIS domain CFSAN000658_RS14060 PF01418 Helix-turn-helix domain, rpiR family CFSAN000658_RS14065 PF00474 Sodium:solute symporter family CFSAN000658_RS14070 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CFSAN000658_RS14075 PF01344 Kelch motif CFSAN000658_RS14080 PF06178 Oligogalacturonate-specific porin protein (KdgM) CFSAN000658_RS14085 PF07690 Major Facilitator Superfamily CFSAN000658_RS14090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFSAN000658_RS14090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFSAN000658_RS14105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFSAN000658_RS14110 PF02811 PHP domain CFSAN000658_RS14115 PF02613 Nitrate reductase delta subunit CFSAN000658_RS14120 PF06496 Protein of unknown function (DUF1097) CFSAN000658_RS14125 PF03783 Curli production assembly/transport component CsgG CFSAN000658_RS14130 PF10614 Type VIII secretion system (T8SS), CsgF protein CFSAN000658_RS14135 PF10627 Curli assembly protein CsgE CFSAN000658_RS14140 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS14145 PF07012 Curlin associated repeat CFSAN000658_RS14150 PF07012 Curlin associated repeat CFSAN000658_RS14155 PF10610 Thin aggregative fimbriae synthesis protein CFSAN000658_RS14165 PF01661 Macro domain CFSAN000658_RS14170 PF13091 PLD-like domain CFSAN000658_RS14175 PF01757 Acyltransferase family CFSAN000658_RS14180 PF04349 Periplasmic glucan biosynthesis protein, MdoG CFSAN000658_RS14185 PF00535 Glycosyl transferase family 2 CFSAN000658_RS14190 PF07119 Protein of unknown function (DUF1375) CFSAN000658_RS14195 PF13984 MsyB protein CFSAN000658_RS14200 PF07690 Major Facilitator Superfamily CFSAN000658_RS14205 PF03279 Bacterial lipid A biosynthesis acyltransferase CFSAN000658_RS14210 PF00581 Rhodanese-like domain CFSAN000658_RS14210 PF12368 Rhodanase C-terminal CFSAN000658_RS14210 PF17773 UPF0176 acylphosphatase like domain CFSAN000658_RS14215 PF04264 YceI-like domain CFSAN000658_RS14220 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS14225 PF10968 Protein of unknown function (DUF2770) CFSAN000658_RS14230 PF01266 FAD dependent oxidoreductase CFSAN000658_RS14235 PF13991 BssS protein family CFSAN000658_RS14240 PF06183 DinI-like family CFSAN000658_RS14245 PF01979 Amidohydrolase family CFSAN000658_RS14250 PF07273 Protein of unknown function (DUF1439) CFSAN000658_RS14255 PF04399 Glutaredoxin 2, C terminal domain CFSAN000658_RS14255 PF13417 Glutathione S-transferase, N-terminal domain CFSAN000658_RS14260 PF07690 Major Facilitator Superfamily CFSAN000658_RS14265 PF13302 Acetyltransferase (GNAT) domain CFSAN000658_RS14270 PF04337 Protein of unknown function, DUF480 CFSAN000658_RS14275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFSAN000658_RS14280 PF03023 Lipid II flippase MurJ CFSAN000658_RS14285 PF05130 FlgN protein CFSAN000658_RS14290 PF04316 Anti-sigma-28 factor, FlgM CFSAN000658_RS14295 PF13144 Chaperone for flagella basal body P-ring formation CFSAN000658_RS14300 PF00460 Flagella basal body rod protein CFSAN000658_RS14305 PF00460 Flagella basal body rod protein CFSAN000658_RS14305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFSAN000658_RS14310 PF03963 Flagellar hook capping protein - N-terminal region CFSAN000658_RS14310 PF13860 FlgD Ig-like domain CFSAN000658_RS14310 PF13861 FlgD Tudor-like domain CFSAN000658_RS14315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFSAN000658_RS14315 PF00460 Flagella basal body rod protein CFSAN000658_RS14315 PF07559 Flagellar basal body protein FlaE CFSAN000658_RS14320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFSAN000658_RS14320 PF00460 Flagella basal body rod protein CFSAN000658_RS14325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFSAN000658_RS14325 PF00460 Flagella basal body rod protein CFSAN000658_RS14330 PF02107 Flagellar L-ring protein CFSAN000658_RS14335 PF02119 Flagellar P-ring protein CFSAN000658_RS14340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CFSAN000658_RS14340 PF10135 Rod binding protein CFSAN000658_RS14345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFSAN000658_RS14345 PF00460 Flagella basal body rod protein CFSAN000658_RS14350 PF00669 Bacterial flagellin N-terminal helical region CFSAN000658_RS14355 PF12111 Polyribonucleotide phosphorylase C terminal CFSAN000658_RS14355 PF10150 Ribonuclease E/G family CFSAN000658_RS14355 PF00575 S1 RNA binding domain CFSAN000658_RS14365 PF00849 RNA pseudouridylate synthase CFSAN000658_RS14365 PF01479 S4 domain CFSAN000658_RS14370 PF02545 Maf-like protein CFSAN000658_RS14375 PF02620 Large ribosomal RNA subunit accumulation protein YceD CFSAN000658_RS14380 PF01783 Ribosomal L32p protein family CFSAN000658_RS14385 PF02504 Fatty acid synthesis protein CFSAN000658_RS14390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFSAN000658_RS14390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFSAN000658_RS14395 PF00698 Acyl transferase domain CFSAN000658_RS14405 PF00550 Phosphopantetheine attachment site CFSAN000658_RS14410 PF02801 Beta-ketoacyl synthase, C-terminal domain CFSAN000658_RS14410 PF00109 Beta-ketoacyl synthase, N-terminal domain CFSAN000658_RS14430 PF00577 Outer membrane usher protein CFSAN000658_RS14430 PF13953 PapC C-terminal domain CFSAN000658_RS14430 PF13954 PapC N-terminal domain CFSAN000658_RS14435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS14435 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS14440 PF00419 Fimbrial protein CFSAN000658_RS14445 PF01063 Amino-transferase class IV CFSAN000658_RS14450 PF02618 YceG-like family CFSAN000658_RS14455 PF02223 Thymidylate kinase CFSAN000658_RS14460 PF09115 DNA polymerase III, delta subunit, C terminal CFSAN000658_RS14465 PF01026 TatD related DNase CFSAN000658_RS14470 PF00367 phosphotransferase system, EIIB CFSAN000658_RS14470 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS14475 PF00593 TonB dependent receptor CFSAN000658_RS14475 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS14480 PF01230 HIT domain CFSAN000658_RS14485 PF07233 Protein of unknown function (DUF1425) CFSAN000658_RS14490 PF13036 Peptidoglycan-synthase activator LpoB CFSAN000658_RS14495 PF01636 Phosphotransferase enzyme family CFSAN000658_RS14500 PF00933 Glycosyl hydrolase family 3 N terminal domain CFSAN000658_RS14505 PF05728 Uncharacterised protein family (UPF0227) CFSAN000658_RS14510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS14515 PF05433 Glycine zipper 2TM domain CFSAN000658_RS14520 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS14525 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS14530 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS14530 PF01476 LysM domain CFSAN000658_RS14530 PF17969 L,D-transpeptidase C-terminal domain CFSAN000658_RS14535 PF02559 CarD-like/TRCF domain CFSAN000658_RS14535 PF00270 DEAD/DEAH box helicase CFSAN000658_RS14535 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS14535 PF03461 TRCF domain CFSAN000658_RS14535 PF17757 UvrB interaction domain CFSAN000658_RS14540 PF12704 MacB-like periplasmic core domain CFSAN000658_RS14540 PF02687 FtsX-like permease family CFSAN000658_RS14545 PF00005 ABC transporter CFSAN000658_RS14550 PF12704 MacB-like periplasmic core domain CFSAN000658_RS14550 PF02687 FtsX-like permease family CFSAN000658_RS14555 PF00480 ROK family CFSAN000658_RS14560 PF02146 Sir2 family CFSAN000658_RS14565 PF13416 Bacterial extracellular solute-binding protein CFSAN000658_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS14575 PF06767 Sif protein CFSAN000658_RS14580 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS14585 PF08402 TOBE domain CFSAN000658_RS14585 PF00005 ABC transporter CFSAN000658_RS14590 PF01546 Peptidase family M20/M25/M40 CFSAN000658_RS14590 PF07687 Peptidase dimerisation domain CFSAN000658_RS14600 PF08007 Cupin superfamily protein CFSAN000658_RS14605 PF08918 PhoQ Sensor CFSAN000658_RS14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS14610 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS14610 PF00072 Response regulator receiver domain CFSAN000658_RS14615 PF08328 Adenylosuccinate lyase C-terminal CFSAN000658_RS14615 PF00206 Lyase CFSAN000658_RS14620 PF04356 Protein of unknown function (DUF489) CFSAN000658_RS14630 PF00293 NUDIX domain CFSAN000658_RS14640 PF00849 RNA pseudouridylate synthase CFSAN000658_RS14645 PF00180 Isocitrate/isopropylmalate dehydrogenase CFSAN000658_RS14650 PF01797 Transposase IS200 like CFSAN000658_RS14680 PF03372 Endonuclease/Exonuclease/phosphatase family CFSAN000658_RS14690 PF06183 DinI-like family CFSAN000658_RS14695 PF00652 Ricin-type beta-trefoil lectin domain CFSAN000658_RS14700 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS14720 PF06316 Enterobacterial Ail/Lom protein CFSAN000658_RS14755 PF00011 Hsp20/alpha crystallin family CFSAN000658_RS14770 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS14780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS14785 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS14790 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS14790 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS14795 PF00005 ABC transporter CFSAN000658_RS14800 PF00005 ABC transporter CFSAN000658_RS14805 PF00924 Mechanosensitive ion channel CFSAN000658_RS14820 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CFSAN000658_RS14825 PF13427 Domain of unknown function (DUF4111) CFSAN000658_RS14825 PF01909 Nucleotidyltransferase domain CFSAN000658_RS14835 PF00376 MerR family regulatory protein CFSAN000658_RS14835 PF09278 MerR, DNA binding CFSAN000658_RS14845 PF01817 Chorismate mutase type II CFSAN000658_RS14850 PF01810 LysE type translocator CFSAN000658_RS14855 PF09313 Domain of unknown function (DUF1971) CFSAN000658_RS14860 PF08956 Domain of unknown function (DUF1869) CFSAN000658_RS14875 PF04226 Transglycosylase associated protein CFSAN000658_RS14880 PF03891 Domain of unknown function (DUF333) CFSAN000658_RS14890 PF04343 Protein of unknown function, DUF488 CFSAN000658_RS14900 PF02311 AraC-like ligand binding domain CFSAN000658_RS14900 PF12833 Helix-turn-helix domain CFSAN000658_RS14905 PF04284 Protein of unknown function (DUF441) CFSAN000658_RS14915 PF04073 Aminoacyl-tRNA editing domain CFSAN000658_RS14920 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS14920 PF17155 Gammaproteobacterial periplasmic sensor domain CFSAN000658_RS14925 PF04285 Protein of unknown function (DUF444) CFSAN000658_RS14930 PF06798 PrkA serine protein kinase C-terminal domain CFSAN000658_RS14930 PF08298 PrkA AAA domain CFSAN000658_RS14935 PF06629 MltA-interacting protein MipA CFSAN000658_RS14940 PF13186 Iron-sulfur cluster-binding domain CFSAN000658_RS14940 PF04055 Radical SAM superfamily CFSAN000658_RS14945 PF00248 Aldo/keto reductase family CFSAN000658_RS14950 PF01263 Aldose 1-epimerase CFSAN000658_RS14955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS14955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFSAN000658_RS14960 PF01641 SelR domain CFSAN000658_RS14965 PF07023 Protein of unknown function (DUF1315) CFSAN000658_RS14970 PF00857 Isochorismatase family CFSAN000658_RS14975 PF17763 Glutaminase/Asparaginase C-terminal domain CFSAN000658_RS14975 PF00710 Asparaginase, N-terminal CFSAN000658_RS14980 PF01343 Peptidase family S49 CFSAN000658_RS14985 PF00881 Nitroreductase family CFSAN000658_RS14990 PF02769 AIR synthase related protein, C-terminal domain CFSAN000658_RS14990 PF00586 AIR synthase related protein, N-terminal domain CFSAN000658_RS14995 PF01131 DNA topoisomerase CFSAN000658_RS14995 PF01751 Toprim domain CFSAN000658_RS15000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFSAN000658_RS15000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFSAN000658_RS15005 PF07383 Protein of unknown function (DUF1496) CFSAN000658_RS15010 PF00293 NUDIX domain CFSAN000658_RS15015 PF03372 Endonuclease/Exonuclease/phosphatase family CFSAN000658_RS15020 PF00202 Aminotransferase class-III CFSAN000658_RS15025 PF04958 Arginine N-succinyltransferase beta subunit CFSAN000658_RS15030 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS15035 PF04996 Succinylarginine dihydrolase CFSAN000658_RS15040 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CFSAN000658_RS15045 PF07813 LTXXQ motif family protein CFSAN000658_RS15055 PF02540 NAD synthase CFSAN000658_RS15060 PF04355 SmpA / OmlA family CFSAN000658_RS15065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS15070 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS15075 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CFSAN000658_RS15080 PF07883 Cupin domain CFSAN000658_RS15080 PF12833 Helix-turn-helix domain CFSAN000658_RS15085 PF02056 Family 4 glycosyl hydrolase CFSAN000658_RS15085 PF11975 Family 4 glycosyl hydrolase C-terminal domain CFSAN000658_RS15090 PF04794 YdjC-like protein CFSAN000658_RS15095 PF18011 C-terminal domain found in long catalases CFSAN000658_RS15095 PF00199 Catalase CFSAN000658_RS15095 PF06628 Catalase-related immune-responsive CFSAN000658_RS15100 PF10729 Cell division activator CedA CFSAN000658_RS15105 PF00375 Sodium:dicarboxylate symporter family CFSAN000658_RS15110 PF04307 LexA-binding, inner membrane-associated putative hydrolase CFSAN000658_RS15115 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS15120 PF14002 YniB-like protein CFSAN000658_RS15125 PF03881 Fructosamine kinase CFSAN000658_RS15130 PF11080 Endoribonuclease GhoS CFSAN000658_RS15135 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS15140 PF04338 Protein of unknown function, DUF481 CFSAN000658_RS15155 PF01223 DNA/RNA non-specific endonuclease CFSAN000658_RS15160 PF03129 Anticodon binding domain CFSAN000658_RS15160 PF02824 TGS domain CFSAN000658_RS15160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFSAN000658_RS15160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFSAN000658_RS15165 PF05198 Translation initiation factor IF-3, N-terminal domain CFSAN000658_RS15165 PF00707 Translation initiation factor IF-3, C-terminal domain CFSAN000658_RS15170 PF01632 Ribosomal protein L35 CFSAN000658_RS15175 PF00453 Ribosomal protein L20 CFSAN000658_RS15180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CFSAN000658_RS15180 PF01409 tRNA synthetases class II core domain (F) CFSAN000658_RS15185 PF03483 B3/4 domain CFSAN000658_RS15185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CFSAN000658_RS15185 PF01588 Putative tRNA binding domain CFSAN000658_RS15185 PF03484 tRNA synthetase B5 domain CFSAN000658_RS15185 PF03147 Ferredoxin-fold anticodon binding domain CFSAN000658_RS15190 PF00216 Bacterial DNA-binding protein CFSAN000658_RS15195 PF01032 FecCD transport family CFSAN000658_RS15200 PF00255 Glutathione peroxidase CFSAN000658_RS15205 PF00005 ABC transporter CFSAN000658_RS15210 PF00877 NlpC/P60 family CFSAN000658_RS15215 PF00563 EAL domain CFSAN000658_RS15220 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CFSAN000658_RS15225 PF10636 Hemin uptake protein hemP CFSAN000658_RS15230 PF00793 DAHP synthetase I family CFSAN000658_RS15235 PF03618 Kinase/pyrophosphorylase CFSAN000658_RS15240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CFSAN000658_RS15240 PF00391 PEP-utilising enzyme, mobile domain CFSAN000658_RS15240 PF02896 PEP-utilising enzyme, TIM barrel domain CFSAN000658_RS15245 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS15245 PF00501 AMP-binding enzyme CFSAN000658_RS15255 PF01494 FAD binding domain CFSAN000658_RS15260 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS15260 PF00766 Electron transfer flavoprotein FAD-binding domain CFSAN000658_RS15265 PF01012 Electron transfer flavoprotein domain CFSAN000658_RS15270 PF12833 Helix-turn-helix domain CFSAN000658_RS15270 PF02311 AraC-like ligand binding domain CFSAN000658_RS15275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFSAN000658_RS15275 PF02770 Acyl-CoA dehydrogenase, middle domain CFSAN000658_RS15275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS15280 PF01144 Coenzyme A transferase CFSAN000658_RS15285 PF01487 Type I 3-dehydroquinase CFSAN000658_RS15290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFSAN000658_RS15290 PF08501 Shikimate dehydrogenase substrate binding domain CFSAN000658_RS15295 PF07690 Major Facilitator Superfamily CFSAN000658_RS15300 PF07690 Major Facilitator Superfamily CFSAN000658_RS15305 PF08965 Domain of unknown function (DUF1870) CFSAN000658_RS15310 PF01594 AI-2E family transporter CFSAN000658_RS15315 PF13183 4Fe-4S dicluster domain CFSAN000658_RS15315 PF02913 FAD linked oxidases, C-terminal domain CFSAN000658_RS15315 PF01565 FAD binding domain CFSAN000658_RS15320 PF03061 Thioesterase superfamily CFSAN000658_RS15325 PF15930 Domain of unknown function CFSAN000658_RS15330 PF00375 Sodium:dicarboxylate symporter family CFSAN000658_RS15335 PF01521 Iron-sulphur cluster biosynthesis CFSAN000658_RS15340 PF01458 Uncharacterized protein family (UPF0051) CFSAN000658_RS15345 PF00005 ABC transporter CFSAN000658_RS15350 PF01458 Uncharacterized protein family (UPF0051) CFSAN000658_RS15355 PF00266 Aminotransferase class-V CFSAN000658_RS15360 PF02657 Fe-S metabolism associated domain CFSAN000658_RS15365 PF17969 L,D-transpeptidase C-terminal domain CFSAN000658_RS15365 PF01476 LysM domain CFSAN000658_RS15365 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS15370 PF04728 Lipoprotein leucine-zipper CFSAN000658_RS15375 PF00224 Pyruvate kinase, barrel domain CFSAN000658_RS15375 PF02887 Pyruvate kinase, alpha/beta domain CFSAN000658_RS15380 PF00324 Amino acid permease CFSAN000658_RS15385 PF00561 alpha/beta hydrolase fold CFSAN000658_RS15395 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS15400 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS15400 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS15400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS15405 PF03916 Polysulphide reductase, NrfD CFSAN000658_RS15410 PF13247 4Fe-4S dicluster domain CFSAN000658_RS15415 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS15420 PF00072 Response regulator receiver domain CFSAN000658_RS15420 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS15425 PF10965 Protein of unknown function (DUF2767) CFSAN000658_RS15430 PF08349 Protein of unknown function (DUF1722) CFSAN000658_RS15435 PF13411 MerR HTH family regulatory protein CFSAN000658_RS15440 PF00072 Response regulator receiver domain CFSAN000658_RS15440 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS15445 PF00072 Response regulator receiver domain CFSAN000658_RS15445 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS15445 PF00672 HAMP domain CFSAN000658_RS15445 PF01627 Hpt domain CFSAN000658_RS15445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CFSAN000658_RS15455 PF03958 Bacterial type II/III secretion system short domain CFSAN000658_RS15455 PF00263 Bacterial type II and III secretion system protein CFSAN000658_RS15475 PF03433 EspA-like secreted protein CFSAN000658_RS15485 PF04888 Secretion system effector C (SseC) like family CFSAN000658_RS15490 PF05802 Enterobacterial EspB protein CFSAN000658_RS15530 PF01514 Secretory protein of YscJ/FliF family CFSAN000658_RS15545 PF07201 HrpJ-like domain CFSAN000658_RS15555 PF00771 FHIPEP family CFSAN000658_RS15560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS15560 PF18269 T3SS EscN ATPase C-terminal domain CFSAN000658_RS15575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFSAN000658_RS15580 PF00813 FliP family CFSAN000658_RS15585 PF01313 Bacterial export proteins, family 3 CFSAN000658_RS15590 PF01311 Bacterial export proteins, family 1 CFSAN000658_RS15595 PF01312 FlhB HrpN YscU SpaS Family CFSAN000658_RS15610 PF01554 MatE CFSAN000658_RS15615 PF00677 Lumazine binding domain CFSAN000658_RS15625 PF07690 Major Facilitator Superfamily CFSAN000658_RS15630 PF03466 LysR substrate binding domain CFSAN000658_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS15635 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS15640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFSAN000658_RS15640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFSAN000658_RS15645 PF00877 NlpC/P60 family CFSAN000658_RS15650 PF00462 Glutaredoxin CFSAN000658_RS15655 PF00929 Exonuclease CFSAN000658_RS15660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFSAN000658_RS15665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFSAN000658_RS15670 PF16925 Tetracyclin repressor-like, C-terminal domain CFSAN000658_RS15670 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS15675 PF06945 Protein of unknown function (DUF1289) CFSAN000658_RS15680 PF00248 Aldo/keto reductase family CFSAN000658_RS15685 PF00080 Copper/zinc superoxide dismutase (SODC) CFSAN000658_RS15690 PF04632 Fusaric acid resistance protein family CFSAN000658_RS15695 PF00529 HlyD membrane-fusion protein of T1SS CFSAN000658_RS15695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS15700 PF07869 Protein of unknown function (DUF1656) CFSAN000658_RS15705 PF01047 MarR family CFSAN000658_RS15710 PF05433 Glycine zipper 2TM domain CFSAN000658_RS15715 PF03702 Anhydro-N-acetylmuramic acid kinase CFSAN000658_RS15720 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CFSAN000658_RS15725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CFSAN000658_RS15725 PF01243 Pyridoxamine 5'-phosphate oxidase CFSAN000658_RS15730 PF00579 tRNA synthetases class I (W and Y) CFSAN000658_RS15730 PF01479 S4 domain CFSAN000658_RS15735 PF08543 Phosphomethylpyrimidine kinase CFSAN000658_RS15740 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS15740 PF00043 Glutathione S-transferase, C-terminal domain CFSAN000658_RS15745 PF00854 POT family CFSAN000658_RS15750 PF10576 Iron-sulfur binding domain of endonuclease III CFSAN000658_RS15750 PF00730 HhH-GPD superfamily base excision DNA repair protein CFSAN000658_RS15750 PF00633 Helix-hairpin-helix motif CFSAN000658_RS15755 PF02508 Rnf-Nqr subunit, membrane protein CFSAN000658_RS15760 PF04205 FMN-binding domain CFSAN000658_RS15765 PF03116 NQR2, RnfD, RnfE family CFSAN000658_RS15770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFSAN000658_RS15770 PF12838 4Fe-4S dicluster domain CFSAN000658_RS15770 PF13375 RnfC Barrel sandwich hybrid domain CFSAN000658_RS15770 PF10531 SLBB domain CFSAN000658_RS15775 PF04060 Putative Fe-S cluster CFSAN000658_RS15780 PF02508 Rnf-Nqr subunit, membrane protein CFSAN000658_RS15785 PF10754 Protein of unknown function (DUF2569) CFSAN000658_RS15790 PF05321 Haemolysin expression modulating protein CFSAN000658_RS15800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFSAN000658_RS15800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFSAN000658_RS15805 PF00962 Adenosine/AMP deaminase CFSAN000658_RS15810 PF00155 Aminotransferase class I and II CFSAN000658_RS15815 PF00367 phosphotransferase system, EIIB CFSAN000658_RS15815 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS15820 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS15820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFSAN000658_RS15825 PF06097 Bacterial protein of unknown function (DUF945) CFSAN000658_RS15830 PF01238 Phosphomannose isomerase type I CFSAN000658_RS15835 PF05681 Fumarate hydratase (Fumerase) CFSAN000658_RS15835 PF05683 Fumarase C-terminus CFSAN000658_RS15840 PF10415 Fumarase C C-terminus CFSAN000658_RS15840 PF00206 Lyase CFSAN000658_RS15845 PF05472 DNA replication terminus site-binding protein (Ter protein) CFSAN000658_RS15850 PF00672 HAMP domain CFSAN000658_RS15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS15850 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS15855 PF01979 Amidohydrolase family CFSAN000658_RS15855 PF13382 Adenine deaminase C-terminal domain CFSAN000658_RS15860 PF00267 Gram-negative porin CFSAN000658_RS15870 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS15870 PF00072 Response regulator receiver domain CFSAN000658_RS15875 PF06942 GlpM protein CFSAN000658_RS15880 PF13520 Amino acid permease CFSAN000658_RS15885 PF07338 Protein of unknown function (DUF1471) CFSAN000658_RS15890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CFSAN000658_RS15890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFSAN000658_RS15890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFSAN000658_RS15895 PF02233 NAD(P) transhydrogenase beta subunit CFSAN000658_RS15900 PF01594 AI-2E family transporter CFSAN000658_RS15905 PF00893 Small Multidrug Resistance protein CFSAN000658_RS15910 PF00893 Small Multidrug Resistance protein CFSAN000658_RS15915 PF00089 Trypsin CFSAN000658_RS15925 PF07690 Major Facilitator Superfamily CFSAN000658_RS15930 PF03466 LysR substrate binding domain CFSAN000658_RS15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS15935 PF00480 ROK family CFSAN000658_RS15945 PF00654 Voltage gated chloride channel CFSAN000658_RS15950 PF00005 ABC transporter CFSAN000658_RS15950 PF00571 CBS domain CFSAN000658_RS15955 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS15960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFSAN000658_RS15965 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS15970 PF02613 Nitrate reductase delta subunit CFSAN000658_RS15975 PF04976 DMSO reductase anchor subunit (DmsC) CFSAN000658_RS15980 PF12800 4Fe-4S binding domain CFSAN000658_RS15980 PF13247 4Fe-4S dicluster domain CFSAN000658_RS15985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS15985 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS15985 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS15990 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS15990 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS15990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS15995 PF06649 Protein of unknown function (DUF1161) CFSAN000658_RS16000 PF06788 Uncharacterised protein family (UPF0257) CFSAN000658_RS16005 PF13302 Acetyltransferase (GNAT) domain CFSAN000658_RS16010 PF06932 Protein of unknown function (DUF1283) CFSAN000658_RS16015 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CFSAN000658_RS16020 PF13378 Enolase C-terminal domain-like CFSAN000658_RS16020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFSAN000658_RS16025 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS16025 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS16030 PF00083 Sugar (and other) transporter CFSAN000658_RS16030 PF07690 Major Facilitator Superfamily CFSAN000658_RS16035 PF01232 Mannitol dehydrogenase Rossmann domain CFSAN000658_RS16035 PF08125 Mannitol dehydrogenase C-terminal domain CFSAN000658_RS16040 PF14001 YdfZ protein CFSAN000658_RS16045 PF07729 FCD domain CFSAN000658_RS16045 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS16050 PF00106 short chain dehydrogenase CFSAN000658_RS16055 PF01432 Peptidase family M3 CFSAN000658_RS16060 PF10685 Stress-induced bacterial acidophilic repeat motif CFSAN000658_RS16065 PF02464 Competence-damaged protein CFSAN000658_RS16070 PF04076 Bacterial OB fold (BOF) protein CFSAN000658_RS16080 PF07690 Major Facilitator Superfamily CFSAN000658_RS16085 PF00892 EamA-like transporter family CFSAN000658_RS16090 PF13999 MarB protein CFSAN000658_RS16095 PF12833 Helix-turn-helix domain CFSAN000658_RS16100 PF01047 MarR family CFSAN000658_RS16105 PF01914 MarC family integral membrane protein CFSAN000658_RS16110 PF07690 Major Facilitator Superfamily CFSAN000658_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS16115 PF03466 LysR substrate binding domain CFSAN000658_RS16120 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS16125 PF04960 Glutaminase CFSAN000658_RS16135 PF01062 Bestrophin, RFP-TM, chloride channel CFSAN000658_RS16145 PF00267 Gram-negative porin CFSAN000658_RS16150 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CFSAN000658_RS16160 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CFSAN000658_RS16170 PF01455 HupF/HypC family CFSAN000658_RS16175 PF01750 Hydrogenase maturation protease CFSAN000658_RS16180 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS16185 PF00374 Nickel-dependent hydrogenase CFSAN000658_RS16190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFSAN000658_RS16190 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CFSAN000658_RS16200 PF07729 FCD domain CFSAN000658_RS16200 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS16205 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS16205 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS16210 PF07690 Major Facilitator Superfamily CFSAN000658_RS16220 PF07690 Major Facilitator Superfamily CFSAN000658_RS16225 PF01494 FAD binding domain CFSAN000658_RS16235 PF02547 Queuosine biosynthesis protein CFSAN000658_RS16240 PF01042 Endoribonuclease L-PSP CFSAN000658_RS16280 PF03466 LysR substrate binding domain CFSAN000658_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS16285 PF03060 Nitronate monooxygenase CFSAN000658_RS16310 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS16315 PF03553 Na+/H+ antiporter family CFSAN000658_RS16320 PF00155 Aminotransferase class I and II CFSAN000658_RS16325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFSAN000658_RS16325 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS16330 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS16335 PF11941 Domain of unknown function (DUF3459) CFSAN000658_RS16335 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS16335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFSAN000658_RS16345 PF06411 HdeA/HdeB family CFSAN000658_RS16355 PF06109 Haemolysin E (HlyE) CFSAN000658_RS16360 PF02566 OsmC-like protein CFSAN000658_RS16365 PF10684 Putative biofilm-dependent modulation protein CFSAN000658_RS16370 PF08136 30S ribosomal protein subunit S22 family CFSAN000658_RS16375 PF03949 Malic enzyme, NAD binding domain CFSAN000658_RS16375 PF00390 Malic enzyme, N-terminal domain CFSAN000658_RS16380 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS16380 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS16385 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS16390 PF12800 4Fe-4S binding domain CFSAN000658_RS16390 PF09163 Formate dehydrogenase N, transmembrane CFSAN000658_RS16390 PF13247 4Fe-4S dicluster domain CFSAN000658_RS16395 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS16395 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS16395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS16400 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS16400 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS16400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS16405 PF00892 EamA-like transporter family CFSAN000658_RS16410 PF00267 Gram-negative porin CFSAN000658_RS16420 PF07690 Major Facilitator Superfamily CFSAN000658_RS16425 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS16430 PF07690 Major Facilitator Superfamily CFSAN000658_RS16435 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS16435 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS16435 PF14710 Respiratory nitrate reductase alpha N-terminal CFSAN000658_RS16440 PF13247 4Fe-4S dicluster domain CFSAN000658_RS16440 PF14711 Respiratory nitrate reductase beta C-terminal CFSAN000658_RS16445 PF02613 Nitrate reductase delta subunit CFSAN000658_RS16450 PF02665 Nitrate reductase gamma subunit CFSAN000658_RS16455 PF02567 Phenazine biosynthesis-like protein CFSAN000658_RS16460 PF00797 N-acetyltransferase CFSAN000658_RS16470 PF00324 Amino acid permease CFSAN000658_RS16475 PF06004 Bacterial protein of unknown function (DUF903) CFSAN000658_RS16485 PF00593 TonB dependent receptor CFSAN000658_RS16485 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS16490 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS16490 PF07729 FCD domain CFSAN000658_RS16495 PF16884 N-terminal domain of oxidoreductase CFSAN000658_RS16495 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS16505 PF04657 Putative inner membrane exporter, YdcZ CFSAN000658_RS16510 PF10735 Protein of unknown function (DUF2526) CFSAN000658_RS16530 PF10753 Toxin GhoT_OrtT CFSAN000658_RS16535 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS16540 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS16540 PF00155 Aminotransferase class I and II CFSAN000658_RS16545 PF01427 D-ala-D-ala dipeptidase CFSAN000658_RS16560 PF06767 Sif protein CFSAN000658_RS16565 PF10829 Protein of unknown function (DUF2554) CFSAN000658_RS16570 PF01136 Peptidase family U32 CFSAN000658_RS16570 PF12392 Collagenase CFSAN000658_RS16575 PF07883 Cupin domain CFSAN000658_RS16575 PF01381 Helix-turn-helix CFSAN000658_RS16580 PF03594 Benzoate membrane transport protein CFSAN000658_RS16585 PF11769 Protein of unknown function (DUF3313) CFSAN000658_RS16590 PF03848 Tellurite resistance protein TehB CFSAN000658_RS16595 PF03595 Voltage-dependent anion channel CFSAN000658_RS16600 PF18836 Beta solenoid repeat from YDCK CFSAN000658_RS16605 PF13302 Acetyltransferase (GNAT) domain CFSAN000658_RS16610 PF05343 M42 glutamyl aminopeptidase CFSAN000658_RS16615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS16620 PF03611 PTS system sugar-specific permease component CFSAN000658_RS16625 PF03437 BtpA family CFSAN000658_RS16630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS16635 PF00834 Ribulose-phosphate 3 epimerase family CFSAN000658_RS16640 PF00455 DeoR C terminal sensor domain CFSAN000658_RS16640 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS16645 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS16650 PF01070 FMN-dependent dehydrogenase CFSAN000658_RS16655 PF04264 YceI-like domain CFSAN000658_RS16660 PF04349 Periplasmic glucan biosynthesis protein, MdoG CFSAN000658_RS16665 PF00135 Carboxylesterase family CFSAN000658_RS16670 PF07063 Domain of unknown function (DUF1338) CFSAN000658_RS16675 PF03466 LysR substrate binding domain CFSAN000658_RS16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS16680 PF00672 HAMP domain CFSAN000658_RS16680 PF02203 Tar ligand binding domain homologue CFSAN000658_RS16680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS16685 PF00107 Zinc-binding dehydrogenase CFSAN000658_RS16685 PF08240 Alcohol dehydrogenase GroES-like domain CFSAN000658_RS16690 PF02583 Metal-sensitive transcriptional repressor CFSAN000658_RS16700 PF06767 Sif protein CFSAN000658_RS16700 PF00657 GDSL-like Lipase/Acylhydrolase CFSAN000658_RS16710 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS16715 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS16720 PF00005 ABC transporter CFSAN000658_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS16735 PF08242 Methyltransferase domain CFSAN000658_RS16740 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS16745 PF02698 DUF218 domain CFSAN000658_RS16750 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS16750 PF04408 Helicase associated domain (HA2) CFSAN000658_RS16750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CFSAN000658_RS16750 PF11898 Domain of unknown function (DUF3418) CFSAN000658_RS16750 PF00270 DEAD/DEAH box helicase CFSAN000658_RS16755 PF02525 Flavodoxin-like fold CFSAN000658_RS16765 PF07027 Protein of unknown function (DUF1318) CFSAN000658_RS16770 PF13617 YnbE-like lipoprotein CFSAN000658_RS16780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFSAN000658_RS16780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFSAN000658_RS16785 PF03724 META domain CFSAN000658_RS16790 PF03891 Domain of unknown function (DUF333) CFSAN000658_RS16800 PF10371 Domain of unknown function CFSAN000658_RS16800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CFSAN000658_RS16800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CFSAN000658_RS16800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CFSAN000658_RS16800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS16805 PF13333 Integrase core domain CFSAN000658_RS16805 PF00665 Integrase core domain CFSAN000658_RS16805 PF13276 HTH-like domain CFSAN000658_RS16820 PF00582 Universal stress protein family CFSAN000658_RS16825 PF00893 Small Multidrug Resistance protein CFSAN000658_RS16835 PF01171 PP-loop family CFSAN000658_RS16840 PF00270 DEAD/DEAH box helicase CFSAN000658_RS16840 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS16840 PF03880 DbpA RNA binding domain CFSAN000658_RS16845 PF01544 CorA-like Mg2+ transporter protein CFSAN000658_RS16850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS16850 PF02203 Tar ligand binding domain homologue CFSAN000658_RS16850 PF00672 HAMP domain CFSAN000658_RS16855 PF01713 Smr domain CFSAN000658_RS16860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFSAN000658_RS16860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFSAN000658_RS16865 PF00027 Cyclic nucleotide-binding domain CFSAN000658_RS16865 PF13545 Crp-like helix-turn-helix domain CFSAN000658_RS16870 PF00582 Universal stress protein family CFSAN000658_RS16875 PF10749 Protein of unknown function (DUF2534) CFSAN000658_RS16880 PF00924 Mechanosensitive ion channel CFSAN000658_RS16900 PF08534 Redoxin CFSAN000658_RS16920 PF12833 Helix-turn-helix domain CFSAN000658_RS16920 PF06445 GyrI-like small molecule binding domain CFSAN000658_RS16935 PF00440 Bacterial regulatory proteins, tetR family CFSAN000658_RS16945 PF00248 Aldo/keto reductase family CFSAN000658_RS16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS16950 PF03466 LysR substrate binding domain CFSAN000658_RS16960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS16965 PF00246 Zinc carboxypeptidase CFSAN000658_RS16970 PF13378 Enolase C-terminal domain-like CFSAN000658_RS16970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFSAN000658_RS16975 PF08534 Redoxin CFSAN000658_RS16980 PF00158 Sigma-54 interaction domain CFSAN000658_RS16980 PF18024 Helix-turn-helix domain CFSAN000658_RS16985 PF05128 Domain of unknown function (DUF697) CFSAN000658_RS16990 PF04317 YcjX-like family, DUF463 CFSAN000658_RS16995 PF00581 Rhodanese-like domain CFSAN000658_RS17000 PF09584 Phage shock protein PspD (Phageshock_PspD) CFSAN000658_RS17005 PF04024 PspC domain CFSAN000658_RS17010 PF06667 Phage shock protein B CFSAN000658_RS17015 PF04012 PspA/IM30 family CFSAN000658_RS17020 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS17020 PF00158 Sigma-54 interaction domain CFSAN000658_RS17025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS17030 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS17065 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS17065 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS17070 PF00005 ABC transporter CFSAN000658_RS17070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS17075 PF00005 ABC transporter CFSAN000658_RS17110 PF08206 Ribonuclease B OB domain CFSAN000658_RS17110 PF00773 RNB domain CFSAN000658_RS17110 PF17876 Cold shock domain CFSAN000658_RS17110 PF00575 S1 RNA binding domain CFSAN000658_RS17115 PF00563 EAL domain CFSAN000658_RS17115 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS17115 PF13426 PAS domain CFSAN000658_RS17125 PF08220 DeoR-like helix-turn-helix domain CFSAN000658_RS17125 PF00455 DeoR C terminal sensor domain CFSAN000658_RS17130 PF05433 Glycine zipper 2TM domain CFSAN000658_RS17135 PF01253 Translation initiation factor SUI1 CFSAN000658_RS17140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS17145 PF18073 Rubredoxin metal binding domain CFSAN000658_RS17150 PF06305 Lipopolysaccharide assembly protein A domain CFSAN000658_RS17155 PF01569 PAP2 superfamily CFSAN000658_RS17160 PF00925 GTP cyclohydrolase II CFSAN000658_RS17165 PF00694 Aconitase C-terminal domain CFSAN000658_RS17165 PF00330 Aconitase family (aconitate hydratase) CFSAN000658_RS17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS17175 PF03466 LysR substrate binding domain CFSAN000658_RS17180 PF08272 Topoisomerase I zinc-ribbon-like CFSAN000658_RS17180 PF01131 DNA topoisomerase CFSAN000658_RS17180 PF01751 Toprim domain CFSAN000658_RS17180 PF01396 Topoisomerase DNA binding C4 zinc finger CFSAN000658_RS17185 PF10692 Protein of unknown function (DUF2498) CFSAN000658_RS17190 PF01343 Peptidase family S49 CFSAN000658_RS17190 PF08496 Peptidase family S49 N-terminal CFSAN000658_RS17195 PF00106 short chain dehydrogenase CFSAN000658_RS17200 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CFSAN000658_RS17205 PF00849 RNA pseudouridylate synthase CFSAN000658_RS17205 PF01479 S4 domain CFSAN000658_RS17210 PF01300 Telomere recombination CFSAN000658_RS17215 PF02811 PHP domain CFSAN000658_RS17220 PF04715 Anthranilate synthase component I, N terminal region CFSAN000658_RS17220 PF00425 chorismate binding enzyme CFSAN000658_RS17225 PF02885 Glycosyl transferase family, helical bundle domain CFSAN000658_RS17225 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS17225 PF00591 Glycosyl transferase family, a/b domain CFSAN000658_RS17230 PF00218 Indole-3-glycerol phosphate synthase CFSAN000658_RS17230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CFSAN000658_RS17235 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS17240 PF00290 Tryptophan synthase alpha chain CFSAN000658_RS17245 PF10685 Stress-induced bacterial acidophilic repeat motif CFSAN000658_RS17250 PF05974 Domain of unknown function (DUF892) CFSAN000658_RS17255 PF05974 Domain of unknown function (DUF892) CFSAN000658_RS17260 PF05067 Manganese containing catalase CFSAN000658_RS17265 PF03922 OmpW family CFSAN000658_RS17270 PF03692 Putative zinc- or iron-chelating domain CFSAN000658_RS17280 PF04279 Intracellular septation protein A CFSAN000658_RS17285 PF03061 Thioesterase superfamily CFSAN000658_RS17290 PF03544 Gram-negative bacterial TonB protein C-terminal CFSAN000658_RS17295 PF03795 YCII-related domain CFSAN000658_RS17300 PF13396 Phospholipase_D-nuclease N-terminal CFSAN000658_RS17300 PF13091 PLD-like domain CFSAN000658_RS17305 PF04269 Protein of unknown function, DUF440 CFSAN000658_RS17310 PF00520 Ion transport protein CFSAN000658_RS17310 PF00027 Cyclic nucleotide-binding domain CFSAN000658_RS17315 PF00005 ABC transporter CFSAN000658_RS17315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS17320 PF00005 ABC transporter CFSAN000658_RS17320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS17325 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS17325 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS17330 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS17335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS17340 PF01914 MarC family integral membrane protein CFSAN000658_RS17345 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS17345 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS17350 PF00265 Thymidine kinase CFSAN000658_RS17355 PF00816 H-NS histone family CFSAN000658_RS17360 PF00483 Nucleotidyl transferase CFSAN000658_RS17365 PF00072 Response regulator receiver domain CFSAN000658_RS17370 PF01734 Patatin-like phospholipase CFSAN000658_RS17375 PF02810 SEC-C motif CFSAN000658_RS17380 PF00551 Formyl transferase CFSAN000658_RS17380 PF01842 ACT domain CFSAN000658_RS17400 PF02665 Nitrate reductase gamma subunit CFSAN000658_RS17405 PF02613 Nitrate reductase delta subunit CFSAN000658_RS17410 PF13247 4Fe-4S dicluster domain CFSAN000658_RS17410 PF14711 Respiratory nitrate reductase beta C-terminal CFSAN000658_RS17415 PF14710 Respiratory nitrate reductase alpha N-terminal CFSAN000658_RS17415 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS17415 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS17420 PF07690 Major Facilitator Superfamily CFSAN000658_RS17430 PF07730 Histidine kinase CFSAN000658_RS17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS17430 PF00672 HAMP domain CFSAN000658_RS17430 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CFSAN000658_RS17435 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS17435 PF00072 Response regulator receiver domain CFSAN000658_RS17440 PF11924 Inverse autotransporter, beta-domain CFSAN000658_RS17445 PF02635 DsrE/DsrF-like family CFSAN000658_RS17450 PF06150 ChaB CFSAN000658_RS17455 PF01699 Sodium/calcium exchanger protein CFSAN000658_RS17460 PF01797 Transposase IS200 like CFSAN000658_RS17465 PF00793 DAHP synthetase I family CFSAN000658_RS17470 PF13369 Transglutaminase-like superfamily CFSAN000658_RS17475 PF04247 Invasion gene expression up-regulator, SirB CFSAN000658_RS17480 PF13847 Methyltransferase domain CFSAN000658_RS17480 PF17827 PrmC N-terminal domain CFSAN000658_RS17485 PF03462 PCRF domain CFSAN000658_RS17485 PF00472 RF-1 domain CFSAN000658_RS17490 PF01488 Shikimate / quinate 5-dehydrogenase CFSAN000658_RS17490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CFSAN000658_RS17490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CFSAN000658_RS17495 PF03550 Outer membrane lipoprotein LolB CFSAN000658_RS17500 PF08544 GHMP kinases C terminal CFSAN000658_RS17500 PF00288 GHMP kinases N terminal domain CFSAN000658_RS17505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CFSAN000658_RS17505 PF14572 Phosphoribosyl synthetase-associated domain CFSAN000658_RS17510 PF01740 STAS domain CFSAN000658_RS17510 PF00916 Sulfate permease family CFSAN000658_RS17520 PF01195 Peptidyl-tRNA hydrolase CFSAN000658_RS17525 PF06071 Protein of unknown function (DUF933) CFSAN000658_RS17525 PF01926 50S ribosome-binding GTPase CFSAN000658_RS17540 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CFSAN000658_RS17540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFSAN000658_RS17545 PF00374 Nickel-dependent hydrogenase CFSAN000658_RS17550 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS17555 PF01750 Hydrogenase maturation protease CFSAN000658_RS17560 PF07449 Hydrogenase-1 expression protein HyaE CFSAN000658_RS17565 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CFSAN000658_RS17570 PF01654 Cytochrome bd terminal oxidase subunit I CFSAN000658_RS17575 PF02322 Cytochrome bd terminal oxidase subunit II CFSAN000658_RS17580 PF08173 Membrane bound YbgT-like protein CFSAN000658_RS17585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFSAN000658_RS17585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFSAN000658_RS17590 PF01204 Trehalase CFSAN000658_RS17595 PF04226 Transglycosylase associated protein CFSAN000658_RS17600 PF07238 PilZ domain CFSAN000658_RS17600 PF07317 Flagellar regulator YcgR CFSAN000658_RS17605 PF01464 Transglycosylase SLT domain CFSAN000658_RS17610 PF02016 LD-carboxypeptidase N-terminal domain CFSAN000658_RS17610 PF17676 LD-carboxypeptidase C-terminal domain CFSAN000658_RS17615 PF00999 Sodium/hydrogen exchanger family CFSAN000658_RS17615 PF02080 TrkA-C domain CFSAN000658_RS17615 PF03471 Transporter associated domain CFSAN000658_RS17620 PF00842 Alanine racemase, C-terminal domain CFSAN000658_RS17620 PF01168 Alanine racemase, N-terminal domain CFSAN000658_RS17625 PF01266 FAD dependent oxidoreductase CFSAN000658_RS17630 PF04293 SpoVR like protein CFSAN000658_RS17635 PF07840 FadR C-terminal domain CFSAN000658_RS17635 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS17640 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CFSAN000658_RS17645 PF02600 Disulfide bond formation protein DsbB CFSAN000658_RS17655 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CFSAN000658_RS17665 PF03692 Putative zinc- or iron-chelating domain CFSAN000658_RS17670 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFSAN000658_RS17675 PF05166 YcgL domain CFSAN000658_RS17680 PF03775 Septum formation inhibitor MinC, C-terminal domain CFSAN000658_RS17680 PF05209 Septum formation inhibitor MinC, N-terminal domain CFSAN000658_RS17685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CFSAN000658_RS17690 PF03776 Septum formation topological specificity factor MinE CFSAN000658_RS17695 PF01612 3'-5' exonuclease CFSAN000658_RS17695 PF00570 HRDC domain CFSAN000658_RS17700 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS17700 PF00501 AMP-binding enzyme CFSAN000658_RS17705 PF03843 Outer membrane lipoprotein Slp family CFSAN000658_RS17710 PF00814 Glycoprotease family CFSAN000658_RS17715 PF13307 Helicase C-terminal domain CFSAN000658_RS17715 PF04851 Type III restriction enzyme, res subunit CFSAN000658_RS17720 PF01042 Endoribonuclease L-PSP CFSAN000658_RS17725 PF03701 Uncharacterised protein family (UPF0181) CFSAN000658_RS17730 PF00425 chorismate binding enzyme CFSAN000658_RS17730 PF04715 Anthranilate synthase component I, N terminal region CFSAN000658_RS17735 PF00293 NUDIX domain CFSAN000658_RS17740 PF03315 Serine dehydratase beta chain CFSAN000658_RS17740 PF03313 Serine dehydratase alpha chain CFSAN000658_RS17745 PF12792 CSS motif domain associated with EAL CFSAN000658_RS17745 PF00563 EAL domain CFSAN000658_RS17750 PF03741 Integral membrane protein TerC family CFSAN000658_RS17750 PF03471 Transporter associated domain CFSAN000658_RS17760 PF03830 PTS system sorbose subfamily IIB component CFSAN000658_RS17760 PF03610 PTS system fructose IIA component CFSAN000658_RS17765 PF03609 PTS system sorbose-specific iic component CFSAN000658_RS17770 PF03613 PTS system mannose/fructose/sorbose family IID component CFSAN000658_RS17775 PF06173 Protein of unknown function (DUF986) CFSAN000658_RS17780 PF02659 Putative manganese efflux pump CFSAN000658_RS17785 PF13847 Methyltransferase domain CFSAN000658_RS17790 PF03717 Penicillin-binding Protein dimerisation domain CFSAN000658_RS17790 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS17795 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS17800 PF10736 Protein of unknown function (DUF2627) CFSAN000658_RS17805 PF13974 YebO-like protein CFSAN000658_RS17810 PF13998 MgrB protein CFSAN000658_RS17815 PF13996 YobH-like protein CFSAN000658_RS17820 PF01614 Bacterial transcriptional regulator CFSAN000658_RS17820 PF09339 IclR helix-turn-helix domain CFSAN000658_RS17825 PF07690 Major Facilitator Superfamily CFSAN000658_RS17830 PF01435 Peptidase family M48 CFSAN000658_RS17835 PF17804 Tail specific protease N-terminal domain CFSAN000658_RS17835 PF03572 Peptidase family S41 CFSAN000658_RS17835 PF00595 PDZ domain CFSAN000658_RS17835 PF11818 C-terminal domain of tail specific protease (DUF3340) CFSAN000658_RS17840 PF04352 ProQ/FINO family CFSAN000658_RS17840 PF17516 ProQ C-terminal domain CFSAN000658_RS17845 PF13185 GAF domain CFSAN000658_RS17850 PF04403 Paraquat-inducible protein A CFSAN000658_RS17855 PF02470 MlaD protein CFSAN000658_RS17860 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CFSAN000658_RS17860 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CFSAN000658_RS17860 PF01189 16S rRNA methyltransferase RsmB/F CFSAN000658_RS17865 PF07351 Protein of unknown function (DUF1480) CFSAN000658_RS17870 PF07358 Protein of unknown function (DUF1482) CFSAN000658_RS17875 PF00149 Calcineurin-like phosphoesterase CFSAN000658_RS17885 PF05364 Salmonella type III secretion SopE effector N-terminus CFSAN000658_RS17885 PF07487 SopE GEF domain CFSAN000658_RS17890 PF07166 Protein of unknown function (DUF1398) CFSAN000658_RS17900 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS17920 PF00892 EamA-like transporter family CFSAN000658_RS17935 PF02040 Arsenical pump membrane protein CFSAN000658_RS17945 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CFSAN000658_RS17985 PF10721 Protein of unknown function (DUF2514) CFSAN000658_RS17995 PF12684 PDDEXK-like domain of unknown function (DUF3799) CFSAN000658_RS17995 PF06630 Enterobacterial exodeoxyribonuclease VIII CFSAN000658_RS18010 PF10709 Protein of unknown function (DUF2511) CFSAN000658_RS18015 PF05425 Copper resistance protein D CFSAN000658_RS18020 PF04234 CopC domain CFSAN000658_RS18025 PF06440 DNA polymerase III, theta subunit CFSAN000658_RS18030 PF00795 Carbon-nitrogen hydrolase CFSAN000658_RS18035 PF00929 Exonuclease CFSAN000658_RS18040 PF00326 Prolyl oligopeptidase family CFSAN000658_RS18040 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CFSAN000658_RS18045 PF04391 Protein of unknown function (DUF533) CFSAN000658_RS18050 PF13995 YebF-like protein CFSAN000658_RS18055 PF07130 YebG protein CFSAN000658_RS18060 PF02222 ATP-grasp domain CFSAN000658_RS18065 PF01081 KDPG and KHG aldolase CFSAN000658_RS18070 PF00920 Dehydratase family CFSAN000658_RS18075 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CFSAN000658_RS18075 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS18080 PF01418 Helix-turn-helix domain, rpiR family CFSAN000658_RS18080 PF01380 SIS domain CFSAN000658_RS18085 PF02887 Pyruvate kinase, alpha/beta domain CFSAN000658_RS18085 PF00224 Pyruvate kinase, barrel domain CFSAN000658_RS18090 PF03279 Bacterial lipid A biosynthesis acyltransferase CFSAN000658_RS18095 PF01551 Peptidase family M23 CFSAN000658_RS18095 PF01476 LysM domain CFSAN000658_RS18095 PF08525 Opacity-associated protein A N-terminal motif CFSAN000658_RS18100 PF01297 Zinc-uptake complex component A periplasmic CFSAN000658_RS18105 PF00005 ABC transporter CFSAN000658_RS18110 PF00950 ABC 3 transport family CFSAN000658_RS18115 PF17864 RuvB AAA lid domain CFSAN000658_RS18115 PF05491 RuvB C-terminal winged helix domain CFSAN000658_RS18115 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFSAN000658_RS18120 PF01330 RuvA N terminal domain CFSAN000658_RS18120 PF07499 RuvA, C-terminal domain CFSAN000658_RS18130 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CFSAN000658_RS18135 PF02075 Crossover junction endodeoxyribonuclease RuvC CFSAN000658_RS18140 PF01709 Transcriptional regulator CFSAN000658_RS18145 PF00293 NUDIX domain CFSAN000658_RS18150 PF02938 GAD domain CFSAN000658_RS18150 PF00152 tRNA synthetases class II (D, K and N) CFSAN000658_RS18150 PF01336 OB-fold nucleic acid binding domain CFSAN000658_RS18155 PF00857 Isochorismatase family CFSAN000658_RS18160 PF01904 Protein of unknown function DUF72 CFSAN000658_RS18165 PF01124 MAPEG family CFSAN000658_RS18170 PF13649 Methyltransferase domain CFSAN000658_RS18175 PF08003 Protein of unknown function (DUF1698) CFSAN000658_RS18180 PF03932 CutC family CFSAN000658_RS18185 PF06185 YecM protein CFSAN000658_RS18190 PF05746 DALR anticodon binding domain CFSAN000658_RS18190 PF03485 Arginyl tRNA synthetase N terminal domain CFSAN000658_RS18190 PF00750 tRNA synthetases class I (R) CFSAN000658_RS18195 PF03717 Penicillin-binding Protein dimerisation domain CFSAN000658_RS18195 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS18200 PF07470 Glycosyl Hydrolase Family 88 CFSAN000658_RS18205 PF06366 Flagellar protein FlhE CFSAN000658_RS18210 PF00771 FHIPEP family CFSAN000658_RS18215 PF01312 FlhB HrpN YscU SpaS Family CFSAN000658_RS18220 PF04344 Chemotaxis phosphatase, CheZ CFSAN000658_RS18225 PF00072 Response regulator receiver domain CFSAN000658_RS18230 PF01339 CheB methylesterase CFSAN000658_RS18230 PF00072 Response regulator receiver domain CFSAN000658_RS18235 PF01739 CheR methyltransferase, SAM binding domain CFSAN000658_RS18235 PF03705 CheR methyltransferase, all-alpha domain CFSAN000658_RS18240 PF02203 Tar ligand binding domain homologue CFSAN000658_RS18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFSAN000658_RS18240 PF00672 HAMP domain CFSAN000658_RS18245 PF01584 CheW-like domain CFSAN000658_RS18250 PF01584 CheW-like domain CFSAN000658_RS18250 PF09078 CheY binding CFSAN000658_RS18250 PF02895 Signal transducing histidine kinase, homodimeric domain CFSAN000658_RS18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS18250 PF01627 Hpt domain CFSAN000658_RS18255 PF13677 Membrane MotB of proton-channel complex MotA/MotB CFSAN000658_RS18255 PF00691 OmpA family CFSAN000658_RS18260 PF01618 MotA/TolQ/ExbB proton channel family CFSAN000658_RS18265 PF05280 Flagellar transcriptional activator (FlhC) CFSAN000658_RS18270 PF05247 Flagellar transcriptional activator (FlhD) CFSAN000658_RS18280 PF00582 Universal stress protein family CFSAN000658_RS18285 PF00982 Glycosyltransferase family 20 CFSAN000658_RS18290 PF02358 Trehalose-phosphatase CFSAN000658_RS18300 PF00210 Ferritin-like domain CFSAN000658_RS18310 PF13992 YecR-like lipoprotein CFSAN000658_RS18315 PF00210 Ferritin-like domain CFSAN000658_RS18320 PF10678 Protein of unknown function (DUF2492) CFSAN000658_RS18325 PF03222 Tryptophan/tyrosine permease family CFSAN000658_RS18330 PF03695 Uncharacterised protein family (UPF0149) CFSAN000658_RS18330 PF02810 SEC-C motif CFSAN000658_RS18365 PF01066 CDP-alcohol phosphatidyltransferase CFSAN000658_RS18370 PF01541 GIY-YIG catalytic domain CFSAN000658_RS18370 PF08459 UvrC Helix-hairpin-helix N-terminal CFSAN000658_RS18370 PF02151 UvrB/uvrC motif CFSAN000658_RS18375 PF00072 Response regulator receiver domain CFSAN000658_RS18375 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS18385 PF10769 Protein of unknown function (DUF2594) CFSAN000658_RS18390 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS18390 PF03472 Autoinducer binding domain CFSAN000658_RS18395 PF00005 ABC transporter CFSAN000658_RS18400 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS18405 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS18410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS18415 PF02899 Phage integrase, N-terminal SAM-like domain CFSAN000658_RS18420 PF04539 Sigma-70 region 3 CFSAN000658_RS18420 PF04542 Sigma-70 region 2 CFSAN000658_RS18420 PF04545 Sigma-70, region 4 CFSAN000658_RS18430 PF08884 Flagellin D3 domain CFSAN000658_RS18430 PF00700 Bacterial flagellin C-terminal helical region CFSAN000658_RS18430 PF00669 Bacterial flagellin N-terminal helical region CFSAN000658_RS18435 PF07195 Flagellar hook-associated protein 2 C-terminus CFSAN000658_RS18435 PF07196 Flagellin hook IN motif CFSAN000658_RS18435 PF02465 Flagellar hook-associated protein 2 N-terminus CFSAN000658_RS18440 PF02561 Flagellar protein FliS CFSAN000658_RS18445 PF05400 Flagellar protein FliT CFSAN000658_RS18450 PF02806 Alpha amylase, C-terminal all-beta domain CFSAN000658_RS18450 PF00128 Alpha amylase, catalytic domain CFSAN000658_RS18455 PF13987 YedD-like protein CFSAN000658_RS18460 PF04143 Sulphur transport CFSAN000658_RS18465 PF01206 Sulfurtransferase TusA CFSAN000658_RS18475 PF02049 Flagellar hook-basal body complex protein FliE CFSAN000658_RS18480 PF01514 Secretory protein of YscJ/FliF family CFSAN000658_RS18480 PF08345 Flagellar M-ring protein C-terminal CFSAN000658_RS18485 PF14842 FliG N-terminal domain CFSAN000658_RS18485 PF14841 FliG middle domain CFSAN000658_RS18485 PF01706 FliG C-terminal domain CFSAN000658_RS18490 PF02108 Flagellar assembly protein FliH CFSAN000658_RS18495 PF18269 T3SS EscN ATPase C-terminal domain CFSAN000658_RS18495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFSAN000658_RS18500 PF02050 Flagellar FliJ protein CFSAN000658_RS18505 PF02120 Flagellar hook-length control protein FliK CFSAN000658_RS18510 PF03748 Flagellar basal body-associated protein FliL CFSAN000658_RS18515 PF02154 Flagellar motor switch protein FliM CFSAN000658_RS18515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFSAN000658_RS18520 PF16973 Flagellar motor switch protein FliN N-terminal CFSAN000658_RS18520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFSAN000658_RS18525 PF04347 Flagellar biosynthesis protein, FliO CFSAN000658_RS18530 PF00813 FliP family CFSAN000658_RS18535 PF01313 Bacterial export proteins, family 3 CFSAN000658_RS18540 PF01311 Bacterial export proteins, family 1 CFSAN000658_RS18545 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS18550 PF10781 Dextransucrase DSRB CFSAN000658_RS18555 PF10733 Protein of unknown function (DUF2525) CFSAN000658_RS18565 PF17151 Periplasmic sensor domain CFSAN000658_RS18565 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS18570 PF09926 Uncharacterized small protein (DUF2158) CFSAN000658_RS18575 PF05661 Protein of unknown function (DUF808) CFSAN000658_RS18580 PF00892 EamA-like transporter family CFSAN000658_RS18585 PF03852 DNA mismatch endonuclease Vsr CFSAN000658_RS18590 PF00145 C-5 cytosine-specific DNA methylase CFSAN000658_RS18590 PF18284 DNA methylase N-terminal domain CFSAN000658_RS18595 PF01966 HD domain CFSAN000658_RS18605 PF00267 Gram-negative porin CFSAN000658_RS18610 PF00313 'Cold-shock' DNA-binding domain CFSAN000658_RS18615 PF00817 impB/mucB/samB family CFSAN000658_RS18615 PF11799 impB/mucB/samB family C-terminal domain CFSAN000658_RS18615 PF13438 Domain of unknown function (DUF4113) CFSAN000658_RS18620 PF00717 Peptidase S24-like CFSAN000658_RS18635 PF06167 Glucose-regulated metallo-peptidase M90 CFSAN000658_RS18650 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CFSAN000658_RS18650 PF01048 Phosphorylase superfamily CFSAN000658_RS18680 PF01554 MatE CFSAN000658_RS18700 PF00589 Phage integrase family CFSAN000658_RS18700 PF13356 Arm DNA-binding domain CFSAN000658_RS18705 PF13356 Arm DNA-binding domain CFSAN000658_RS18705 PF00589 Phage integrase family CFSAN000658_RS18710 PF03466 LysR substrate binding domain CFSAN000658_RS18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS18715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS18715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFSAN000658_RS18720 PF00892 EamA-like transporter family CFSAN000658_RS18735 PF17969 L,D-transpeptidase C-terminal domain CFSAN000658_RS18735 PF03734 L,D-transpeptidase catalytic domain CFSAN000658_RS18740 PF02277 Phosphoribosyltransferase CFSAN000658_RS18745 PF02654 Cobalamin-5-phosphate synthase CFSAN000658_RS18750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CFSAN000658_RS18755 PF07685 CobB/CobQ-like glutamine amidotransferase domain CFSAN000658_RS18760 PF00005 ABC transporter CFSAN000658_RS18765 PF02361 Cobalt transport protein CFSAN000658_RS18770 PF02553 Cobalt transport protein component CbiN CFSAN000658_RS18775 PF01891 Cobalt uptake substrate-specific transmembrane region CFSAN000658_RS18780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS18785 PF06180 Cobalt chelatase (CbiK) CFSAN000658_RS18790 PF02571 Precorrin-6x reductase CbiJ/CobK CFSAN000658_RS18795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS18800 PF11761 Cobalamin biosynthesis central region CFSAN000658_RS18800 PF11760 Cobalamin synthesis G N-terminal CFSAN000658_RS18800 PF01890 Cobalamin synthesis G C-terminus CFSAN000658_RS18805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS18810 PF05175 Methyltransferase small domain CFSAN000658_RS18815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFSAN000658_RS18820 PF01888 CbiD CFSAN000658_RS18825 PF02570 Precorrin-8X methylmutase CFSAN000658_RS18830 PF03186 CobD/Cbib protein CFSAN000658_RS18835 PF07685 CobB/CobQ-like glutamine amidotransferase domain CFSAN000658_RS18835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CFSAN000658_RS18840 PF10114 Sensory domain found in PocR CFSAN000658_RS18840 PF12833 Helix-turn-helix domain CFSAN000658_RS18845 PF00230 Major intrinsic protein CFSAN000658_RS18850 PF00936 BMC domain CFSAN000658_RS18855 PF00936 BMC domain CFSAN000658_RS18860 PF02286 Dehydratase large subunit CFSAN000658_RS18865 PF02288 Dehydratase medium subunit CFSAN000658_RS18870 PF02287 Dehydratase small subunit CFSAN000658_RS18875 PF08841 Diol dehydratase reactivase ATPase-like domain CFSAN000658_RS18875 PF18427 DD-reactivating factor swiveling domain CFSAN000658_RS18885 PF00936 BMC domain CFSAN000658_RS18890 PF00936 BMC domain CFSAN000658_RS18895 PF06130 Phosphate propanoyltransferase CFSAN000658_RS18905 PF03319 Ethanolamine utilisation protein EutN/carboxysome CFSAN000658_RS18910 PF01923 Cobalamin adenosyltransferase CFSAN000658_RS18915 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS18920 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS18925 PF13237 4Fe-4S dicluster domain CFSAN000658_RS18925 PF13375 RnfC Barrel sandwich hybrid domain CFSAN000658_RS18925 PF10531 SLBB domain CFSAN000658_RS18925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFSAN000658_RS18935 PF00936 BMC domain CFSAN000658_RS18940 PF10662 Ethanolamine utilisation - propanediol utilisation CFSAN000658_RS18945 PF00871 Acetokinase family CFSAN000658_RS18950 PF00288 GHMP kinases N terminal domain CFSAN000658_RS18955 PF04363 Protein of unknown function (DUF496) CFSAN000658_RS18960 PF04632 Fusaric acid resistance protein family CFSAN000658_RS18965 PF06445 GyrI-like small molecule binding domain CFSAN000658_RS18970 PF00768 D-alanyl-D-alanine carboxypeptidase CFSAN000658_RS18970 PF07943 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS18975 PF01292 Prokaryotic cytochrome b561 CFSAN000658_RS18980 PF13247 4Fe-4S dicluster domain CFSAN000658_RS18980 PF12800 4Fe-4S binding domain CFSAN000658_RS18985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS18985 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS18985 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS18990 PF13979 SopA-like catalytic domain CFSAN000658_RS18990 PF13599 Pentapeptide repeats (9 copies) CFSAN000658_RS18990 PF13981 SopA-like central domain CFSAN000658_RS18995 PF00929 Exonuclease CFSAN000658_RS18995 PF08411 Exonuclease C-terminal CFSAN000658_RS19000 PF13520 Amino acid permease CFSAN000658_RS19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS19005 PF03466 LysR substrate binding domain CFSAN000658_RS19010 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS19015 PF01634 ATP phosphoribosyltransferase CFSAN000658_RS19015 PF08029 HisG, C-terminal domain CFSAN000658_RS19020 PF00815 Histidinol dehydrogenase CFSAN000658_RS19025 PF00155 Aminotransferase class I and II CFSAN000658_RS19030 PF00475 Imidazoleglycerol-phosphate dehydratase CFSAN000658_RS19035 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS19040 PF00977 Histidine biosynthesis protein CFSAN000658_RS19045 PF00977 Histidine biosynthesis protein CFSAN000658_RS19050 PF01502 Phosphoribosyl-AMP cyclohydrolase CFSAN000658_RS19050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CFSAN000658_RS19055 PF02706 Chain length determinant protein CFSAN000658_RS19060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFSAN000658_RS19060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFSAN000658_RS19065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFSAN000658_RS19065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFSAN000658_RS19075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFSAN000658_RS19075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFSAN000658_RS19075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFSAN000658_RS19075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFSAN000658_RS19080 PF00483 Nucleotidyl transferase CFSAN000658_RS19080 PF01050 Mannose-6-phosphate isomerase CFSAN000658_RS19105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFSAN000658_RS19110 PF00483 Nucleotidyl transferase CFSAN000658_RS19115 PF04321 RmlD substrate binding domain CFSAN000658_RS19120 PF16363 GDP-mannose 4,6 dehydratase CFSAN000658_RS19125 PF00483 Nucleotidyl transferase CFSAN000658_RS19135 PF13439 Glycosyltransferase Family 4 CFSAN000658_RS19135 PF00534 Glycosyl transferases group 1 CFSAN000658_RS19140 PF04230 Polysaccharide pyruvyl transferase CFSAN000658_RS19150 PF02397 Bacterial sugar transferase CFSAN000658_RS19155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFSAN000658_RS19155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFSAN000658_RS19155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFSAN000658_RS19155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFSAN000658_RS19160 PF00483 Nucleotidyl transferase CFSAN000658_RS19160 PF01050 Mannose-6-phosphate isomerase CFSAN000658_RS19165 PF13579 Glycosyl transferase 4-like domain CFSAN000658_RS19165 PF00534 Glycosyl transferases group 1 CFSAN000658_RS19170 PF00293 NUDIX domain CFSAN000658_RS19175 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS19180 PF16363 GDP-mannose 4,6 dehydratase CFSAN000658_RS19185 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS19190 PF00535 Glycosyl transferase family 2 CFSAN000658_RS19200 PF00534 Glycosyl transferases group 1 CFSAN000658_RS19200 PF13439 Glycosyltransferase Family 4 CFSAN000658_RS19205 PF00132 Bacterial transferase hexapeptide (six repeats) CFSAN000658_RS19210 PF00535 Glycosyl transferase family 2 CFSAN000658_RS19215 PF02706 Chain length determinant protein CFSAN000658_RS19215 PF13807 G-rich domain on putative tyrosine kinase CFSAN000658_RS19215 PF13614 AAA domain CFSAN000658_RS19220 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFSAN000658_RS19225 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CFSAN000658_RS19225 PF10531 SLBB domain CFSAN000658_RS19225 PF02563 Polysaccharide biosynthesis/export protein CFSAN000658_RS19230 PF00571 CBS domain CFSAN000658_RS19230 PF03741 Integral membrane protein TerC family CFSAN000658_RS19230 PF03471 Transporter associated domain CFSAN000658_RS19235 PF05170 AsmA family CFSAN000658_RS19240 PF00692 dUTPase CFSAN000658_RS19245 PF00485 Phosphoribulokinase / Uridine kinase family CFSAN000658_RS19250 PF08448 PAS fold CFSAN000658_RS19250 PF05231 MASE1 CFSAN000658_RS19250 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS19250 PF00563 EAL domain CFSAN000658_RS19250 PF13426 PAS domain CFSAN000658_RS19250 PF08447 PAS fold CFSAN000658_RS19255 PF06029 AlkA N-terminal domain CFSAN000658_RS19255 PF00730 HhH-GPD superfamily base excision DNA repair protein CFSAN000658_RS19260 PF00012 Hsp70 protein CFSAN000658_RS19265 PF13533 Biotin-lipoyl like CFSAN000658_RS19270 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS19275 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS19280 PF07690 Major Facilitator Superfamily CFSAN000658_RS19285 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS19285 PF00672 HAMP domain CFSAN000658_RS19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS19290 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS19290 PF00072 Response regulator receiver domain CFSAN000658_RS19310 PF16325 Peptidase family U32 C-terminal domain CFSAN000658_RS19310 PF01136 Peptidase family U32 CFSAN000658_RS19315 PF05932 Tir chaperone protein (CesT) family CFSAN000658_RS19330 PF00781 Diacylglycerol kinase catalytic domain CFSAN000658_RS19335 PF01791 DeoC/LacD family aldolase CFSAN000658_RS19340 PF03825 Nucleoside H+ symporter CFSAN000658_RS19345 PF03747 ADP-ribosylglycohydrolase CFSAN000658_RS19350 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS19355 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS19355 PF07702 UTRA domain CFSAN000658_RS19360 PF08543 Phosphomethylpyrimidine kinase CFSAN000658_RS19365 PF02110 Hydroxyethylthiazole kinase family CFSAN000658_RS19370 PF11776 Nickel/cobalt transporter regulator CFSAN000658_RS19375 PF00419 Fimbrial protein CFSAN000658_RS19385 PF02753 Pili assembly chaperone PapD, C-terminal domain CFSAN000658_RS19385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CFSAN000658_RS19400 PF10609 NUBPL iron-transfer P-loop NTPase CFSAN000658_RS19405 PF09334 tRNA synthetases class I (M) CFSAN000658_RS19405 PF01588 Putative tRNA binding domain CFSAN000658_RS19410 PF06998 Protein of unknown function (DUF1307) CFSAN000658_RS19420 PF07308 Protein of unknown function (DUF1456) CFSAN000658_RS19425 PF00072 Response regulator receiver domain CFSAN000658_RS19425 PF04397 LytTr DNA-binding domain CFSAN000658_RS19430 PF07694 5TMR of 5TMR-LYT CFSAN000658_RS19430 PF06580 Histidine kinase CFSAN000658_RS19435 PF13411 MerR HTH family regulatory protein CFSAN000658_RS19445 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS19450 PF00005 ABC transporter CFSAN000658_RS19455 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS19460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFSAN000658_RS19465 PF14310 Fibronectin type III-like domain CFSAN000658_RS19465 PF00933 Glycosyl hydrolase family 3 N terminal domain CFSAN000658_RS19465 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFSAN000658_RS19470 PF01565 FAD binding domain CFSAN000658_RS19470 PF09330 D-lactate dehydrogenase, membrane binding CFSAN000658_RS19475 PF00768 D-alanyl-D-alanine carboxypeptidase CFSAN000658_RS19480 PF04893 Yip1 domain CFSAN000658_RS19485 PF09335 SNARE associated Golgi protein CFSAN000658_RS19495 PF02321 Outer membrane efflux protein CFSAN000658_RS19500 PF01207 Dihydrouridine synthase (Dus) CFSAN000658_RS19505 PF01494 FAD binding domain CFSAN000658_RS19510 PF14497 Glutathione S-transferase, C-terminal domain CFSAN000658_RS19510 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS19515 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFSAN000658_RS19520 PF07883 Cupin domain CFSAN000658_RS19525 PF07690 Major Facilitator Superfamily CFSAN000658_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS19530 PF03466 LysR substrate binding domain CFSAN000658_RS19535 PF03788 LrgA family CFSAN000658_RS19540 PF04172 LrgB-like family CFSAN000658_RS19545 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CFSAN000658_RS19545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFSAN000658_RS19550 PF02698 DUF218 domain CFSAN000658_RS19555 PF10808 Protein of unknown function (DUF2542) CFSAN000658_RS19560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFSAN000658_RS19560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS19565 PF01180 Dihydroorotate dehydrogenase CFSAN000658_RS19570 PF02653 Branched-chain amino acid transport system / permease component CFSAN000658_RS19575 PF00005 ABC transporter CFSAN000658_RS19580 PF13407 Periplasmic binding protein domain CFSAN000658_RS19585 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS19590 PF04235 Protein of unknown function (DUF418) CFSAN000658_RS19595 PF01227 GTP cyclohydrolase I CFSAN000658_RS19600 PF00756 Putative esterase CFSAN000658_RS19610 PF03315 Serine dehydratase beta chain CFSAN000658_RS19610 PF03313 Serine dehydratase alpha chain CFSAN000658_RS19615 PF18429 Domain of unknown function (DUF5609) CFSAN000658_RS19620 PF07690 Major Facilitator Superfamily CFSAN000658_RS19625 PF07715 TonB-dependent Receptor Plug Domain CFSAN000658_RS19625 PF00593 TonB dependent receptor CFSAN000658_RS19630 PF00324 Amino acid permease CFSAN000658_RS19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS19635 PF03466 LysR substrate binding domain CFSAN000658_RS19640 PF03601 Conserved hypothetical protein 698 CFSAN000658_RS19645 PF01261 Xylose isomerase-like TIM barrel CFSAN000658_RS19650 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS19650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS19655 PF00294 pfkB family carbohydrate kinase CFSAN000658_RS19660 PF00381 PTS HPr component phosphorylation site CFSAN000658_RS19660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS19665 PF07690 Major Facilitator Superfamily CFSAN000658_RS19675 PF03692 Putative zinc- or iron-chelating domain CFSAN000658_RS19680 PF01132 Elongation factor P (EF-P) OB domain CFSAN000658_RS19680 PF08207 Elongation factor P (EF-P) KOW-like domain CFSAN000658_RS19680 PF09285 Elongation factor P, C-terminal CFSAN000658_RS19685 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFSAN000658_RS19685 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFSAN000658_RS19690 PF01569 PAP2 superfamily CFSAN000658_RS19695 PF00877 NlpC/P60 family CFSAN000658_RS19700 PF00563 EAL domain CFSAN000658_RS19700 PF12792 CSS motif domain associated with EAL CFSAN000658_RS19705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFSAN000658_RS19710 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS19715 PF12911 N-terminal TM domain of oligopeptide transport permease C CFSAN000658_RS19715 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS19720 PF00005 ABC transporter CFSAN000658_RS19720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFSAN000658_RS19725 PF13989 YejG-like protein CFSAN000658_RS19735 PF07690 Major Facilitator Superfamily CFSAN000658_RS19740 PF01479 S4 domain CFSAN000658_RS19740 PF00849 RNA pseudouridylate synthase CFSAN000658_RS19745 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS19745 PF04851 Type III restriction enzyme, res subunit CFSAN000658_RS19750 PF01386 Ribosomal L25p family CFSAN000658_RS19760 PF04245 37-kD nucleoid-associated bacterial protein CFSAN000658_RS19765 PF07208 Protein of unknown function (DUF1414) CFSAN000658_RS19770 PF11893 Domain of unknown function (DUF3413) CFSAN000658_RS19770 PF00884 Sulfatase CFSAN000658_RS19790 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS19790 PF00072 Response regulator receiver domain CFSAN000658_RS19795 PF03918 Cytochrome C biogenesis protein CFSAN000658_RS19800 PF08534 Redoxin CFSAN000658_RS19810 PF03100 CcmE CFSAN000658_RS19815 PF04995 Heme exporter protein D (CcmD) CFSAN000658_RS19820 PF01578 Cytochrome C assembly protein CFSAN000658_RS19825 PF03379 CcmB protein CFSAN000658_RS19830 PF00005 ABC transporter CFSAN000658_RS19835 PF03264 NapC/NirT cytochrome c family, N-terminal region CFSAN000658_RS19840 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CFSAN000658_RS19845 PF12801 4Fe-4S binding domain CFSAN000658_RS19845 PF13237 4Fe-4S dicluster domain CFSAN000658_RS19850 PF12838 4Fe-4S dicluster domain CFSAN000658_RS19850 PF12800 4Fe-4S binding domain CFSAN000658_RS19855 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS19855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS19855 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS19860 PF03927 NapD protein CFSAN000658_RS19865 PF12800 4Fe-4S binding domain CFSAN000658_RS19865 PF00037 4Fe-4S binding domain CFSAN000658_RS19865 PF13187 4Fe-4S dicluster domain CFSAN000658_RS19870 PF03974 Ecotin CFSAN000658_RS19875 PF00005 ABC transporter CFSAN000658_RS19880 PF13532 2OG-Fe(II) oxygenase superfamily CFSAN000658_RS19885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFSAN000658_RS19885 PF02805 Metal binding domain of Ada CFSAN000658_RS19885 PF12833 Helix-turn-helix domain CFSAN000658_RS19885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFSAN000658_RS19890 PF02424 ApbE family CFSAN000658_RS19895 PF00267 Gram-negative porin CFSAN000658_RS19900 PF01627 Hpt domain CFSAN000658_RS19900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS19900 PF16359 RcsD-ABL domain CFSAN000658_RS19905 PF00196 Bacterial regulatory proteins, luxR family CFSAN000658_RS19905 PF00072 Response regulator receiver domain CFSAN000658_RS19910 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS19910 PF00072 Response regulator receiver domain CFSAN000658_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS19910 PF09456 RcsC Alpha-Beta-Loop (ABL) CFSAN000658_RS19915 PF03989 DNA gyrase C-terminal domain, beta-propeller CFSAN000658_RS19915 PF00521 DNA gyrase/topoisomerase IV, subunit A CFSAN000658_RS19920 PF13378 Enolase C-terminal domain-like CFSAN000658_RS19920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFSAN000658_RS19925 PF07690 Major Facilitator Superfamily CFSAN000658_RS19940 PF00317 Ribonucleotide reductase, all-alpha domain CFSAN000658_RS19940 PF02867 Ribonucleotide reductase, barrel domain CFSAN000658_RS19940 PF03477 ATP cone domain CFSAN000658_RS19945 PF00268 Ribonucleotide reductase, small chain CFSAN000658_RS19950 PF00111 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS19955 PF07690 Major Facilitator Superfamily CFSAN000658_RS19960 PF03466 LysR substrate binding domain CFSAN000658_RS19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS19965 PF03009 Glycerophosphoryl diester phosphodiesterase family CFSAN000658_RS19970 PF07690 Major Facilitator Superfamily CFSAN000658_RS19975 PF04324 BFD-like [2Fe-2S] binding domain CFSAN000658_RS19975 PF01266 FAD dependent oxidoreductase CFSAN000658_RS19980 PF00890 FAD binding domain CFSAN000658_RS19985 PF13183 4Fe-4S dicluster domain CFSAN000658_RS19985 PF02754 Cysteine-rich domain CFSAN000658_RS20000 PF00994 Probable molybdopterin binding domain CFSAN000658_RS20005 PF07437 YfaZ precursor CFSAN000658_RS20010 PF00293 NUDIX domain CFSAN000658_RS20015 PF00300 Histidine phosphatase superfamily (branch 1) CFSAN000658_RS20020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFSAN000658_RS20025 PF00535 Glycosyl transferase family 2 CFSAN000658_RS20030 PF02911 Formyl transferase, C-terminal domain CFSAN000658_RS20030 PF00551 Formyl transferase CFSAN000658_RS20030 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS20035 PF01522 Polysaccharide deacetylase CFSAN000658_RS20040 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CFSAN000658_RS20045 PF00892 EamA-like transporter family CFSAN000658_RS20060 PF00501 AMP-binding enzyme CFSAN000658_RS20060 PF13193 AMP-binding enzyme C-terminal domain CFSAN000658_RS20065 PF13378 Enolase C-terminal domain-like CFSAN000658_RS20070 PF00378 Enoyl-CoA hydratase/isomerase CFSAN000658_RS20075 PF12697 Alpha/beta hydrolase family CFSAN000658_RS20080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS20080 PF16582 Middle domain of thiamine pyrophosphate CFSAN000658_RS20080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS20085 PF00425 chorismate binding enzyme CFSAN000658_RS20090 PF05957 Bacterial protein of unknown function (DUF883) CFSAN000658_RS20095 PF13673 Acetyltransferase (GNAT) domain CFSAN000658_RS20100 PF12706 Beta-lactamase superfamily domain CFSAN000658_RS20105 PF00072 Response regulator receiver domain CFSAN000658_RS20105 PF01584 CheW-like domain CFSAN000658_RS20110 PF00361 Proton-conducting membrane transporter CFSAN000658_RS20115 PF00361 Proton-conducting membrane transporter CFSAN000658_RS20120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFSAN000658_RS20120 PF00361 Proton-conducting membrane transporter CFSAN000658_RS20125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFSAN000658_RS20130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CFSAN000658_RS20135 PF12838 4Fe-4S dicluster domain CFSAN000658_RS20140 PF00146 NADH dehydrogenase CFSAN000658_RS20145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFSAN000658_RS20145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS20145 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS20145 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS20150 PF10531 SLBB domain CFSAN000658_RS20150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFSAN000658_RS20150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFSAN000658_RS20160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CFSAN000658_RS20160 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CFSAN000658_RS20165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFSAN000658_RS20170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CFSAN000658_RS20180 PF03466 LysR substrate binding domain CFSAN000658_RS20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS20190 PF00155 Aminotransferase class I and II CFSAN000658_RS20200 PF02080 TrkA-C domain CFSAN000658_RS20200 PF03600 Citrate transporter CFSAN000658_RS20205 PF13419 Haloacid dehalogenase-like hydrolase CFSAN000658_RS20210 PF03887 YfbU domain CFSAN000658_RS20215 PF04217 Protein of unknown function, DUF412 CFSAN000658_RS20220 PF00871 Acetokinase family CFSAN000658_RS20225 PF01515 Phosphate acetyl/butaryl transferase CFSAN000658_RS20225 PF07085 DRTGG domain CFSAN000658_RS20230 PF03606 C4-dicarboxylate anaerobic carrier CFSAN000658_RS20235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFSAN000658_RS20235 PF02780 Transketolase, C-terminal domain CFSAN000658_RS20235 PF02779 Transketolase, pyrimidine binding domain CFSAN000658_RS20240 PF00456 Transketolase, thiamine diphosphate binding domain CFSAN000658_RS20245 PF03611 PTS system sugar-specific permease component CFSAN000658_RS20255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS20265 PF00356 Bacterial regulatory proteins, lacI family CFSAN000658_RS20270 PF00293 NUDIX domain CFSAN000658_RS20275 PF12850 Calcineurin-like phosphoesterase superfamily domain CFSAN000658_RS20280 PF14834 Glutathione S-transferase, C-terminal domain CFSAN000658_RS20280 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS20285 PF00043 Glutathione S-transferase, C-terminal domain CFSAN000658_RS20285 PF02798 Glutathione S-transferase, N-terminal domain CFSAN000658_RS20290 PF01370 NAD dependent epimerase/dehydratase family CFSAN000658_RS20290 PF08338 Domain of unknown function (DUF1731) CFSAN000658_RS20295 PF00005 ABC transporter CFSAN000658_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS20305 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS20310 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS20315 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS20320 PF02441 Flavoprotein CFSAN000658_RS20325 PF00324 Amino acid permease CFSAN000658_RS20330 PF01168 Alanine racemase, N-terminal domain CFSAN000658_RS20335 PF13520 Amino acid permease CFSAN000658_RS20340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFSAN000658_RS20340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFSAN000658_RS20345 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS20345 PF00158 Sigma-54 interaction domain CFSAN000658_RS20345 PF13426 PAS domain CFSAN000658_RS20350 PF00156 Phosphoribosyl transferase domain CFSAN000658_RS20355 PF02674 Colicin V production protein CFSAN000658_RS20360 PF05036 Sporulation related domain CFSAN000658_RS20365 PF08245 Mur ligase middle domain CFSAN000658_RS20365 PF02875 Mur ligase family, glutamate ligase domain CFSAN000658_RS20370 PF01039 Carboxyl transferase domain CFSAN000658_RS20370 PF17848 Acetyl-coA carboxylase zinc finger domain CFSAN000658_RS20375 PF09335 SNARE associated Golgi protein CFSAN000658_RS20380 PF01416 tRNA pseudouridine synthase CFSAN000658_RS20385 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS20385 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFSAN000658_RS20390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFSAN000658_RS20390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFSAN000658_RS20390 PF11890 Domain of unknown function (DUF3410) CFSAN000658_RS20400 PF07690 Major Facilitator Superfamily CFSAN000658_RS20410 PF13693 Winged helix-turn-helix DNA-binding CFSAN000658_RS20425 PF02517 CPBP intramembrane metalloprotease CFSAN000658_RS20430 PF00109 Beta-ketoacyl synthase, N-terminal domain CFSAN000658_RS20430 PF02801 Beta-ketoacyl synthase, C-terminal domain CFSAN000658_RS20435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CFSAN000658_RS20435 PF01266 FAD dependent oxidoreductase CFSAN000658_RS20440 PF08891 YfcL protein CFSAN000658_RS20445 PF04315 Elongation factor P hydroxylase CFSAN000658_RS20450 PF01925 Sulfite exporter TauE/SafE CFSAN000658_RS20455 PF03411 Penicillin-insensitive murein endopeptidase CFSAN000658_RS20460 PF01264 Chorismate synthase CFSAN000658_RS20465 PF05175 Methyltransferase small domain CFSAN000658_RS20470 PF01713 Smr domain CFSAN000658_RS20475 PF00300 Histidine phosphatase superfamily (branch 1) CFSAN000658_RS20480 PF00378 Enoyl-CoA hydratase/isomerase CFSAN000658_RS20480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFSAN000658_RS20480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFSAN000658_RS20485 PF02803 Thiolase, C-terminal domain CFSAN000658_RS20485 PF00108 Thiolase, N-terminal domain CFSAN000658_RS20490 PF04175 Protein of unknown function (DUF406) CFSAN000658_RS20495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CFSAN000658_RS20500 PF04333 MlaA lipoprotein CFSAN000658_RS20505 PF01226 Formate/nitrite transporter CFSAN000658_RS20515 PF01278 Omptin family CFSAN000658_RS20520 PF14532 Sigma-54 interaction domain CFSAN000658_RS20520 PF02954 Bacterial regulatory protein, Fis family CFSAN000658_RS20520 PF00072 Response regulator receiver domain CFSAN000658_RS20525 PF00672 HAMP domain CFSAN000658_RS20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS20525 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS20535 PF07690 Major Facilitator Superfamily CFSAN000658_RS20540 PF10810 Protein of unknown function (DUF2545) CFSAN000658_RS20550 PF03279 Bacterial lipid A biosynthesis acyltransferase CFSAN000658_RS20555 PF00155 Aminotransferase class I and II CFSAN000658_RS20565 PF02896 PEP-utilising enzyme, TIM barrel domain CFSAN000658_RS20565 PF05524 PEP-utilising enzyme, N-terminal CFSAN000658_RS20565 PF00391 PEP-utilising enzyme, mobile domain CFSAN000658_RS20565 PF00381 PTS HPr component phosphorylation site CFSAN000658_RS20565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFSAN000658_RS20570 PF05343 M42 glutamyl aminopeptidase CFSAN000658_RS20575 PF00557 Metallopeptidase family M24 CFSAN000658_RS20575 PF01321 Creatinase/Prolidase N-terminal domain CFSAN000658_RS20580 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS20585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFSAN000658_RS20590 PF02685 Glucokinase CFSAN000658_RS20595 PF00654 Voltage gated chloride channel CFSAN000658_RS20600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFSAN000658_RS20600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFSAN000658_RS20600 PF00205 Thiamine pyrophosphate enzyme, central domain CFSAN000658_RS20605 PF00248 Aldo/keto reductase family CFSAN000658_RS20610 PF10697 Protein of unknown function (DUF2502) CFSAN000658_RS20615 PF01566 Natural resistance-associated macrophage protein CFSAN000658_RS20620 PF01773 Na+ dependent nucleoside transporter N-terminus CFSAN000658_RS20620 PF07662 Na+ dependent nucleoside transporter C-terminus CFSAN000658_RS20620 PF07670 Nucleoside recognition CFSAN000658_RS20625 PF05231 MASE1 CFSAN000658_RS20625 PF00563 EAL domain CFSAN000658_RS20640 PF07037 Putative transcription regulator (DUF1323) CFSAN000658_RS20645 PF07037 Putative transcription regulator (DUF1323) CFSAN000658_RS20650 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFSAN000658_RS20675 PF03466 LysR substrate binding domain CFSAN000658_RS20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS20685 PF03825 Nucleoside H+ symporter CFSAN000658_RS20690 PF01048 Phosphorylase superfamily CFSAN000658_RS20695 PF03502 Nucleoside-specific channel-forming protein, Tsx CFSAN000658_RS20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS20700 PF03466 LysR substrate binding domain CFSAN000658_RS20705 PF13593 SBF-like CPA transporter family (DUF4137) CFSAN000658_RS20710 PF12843 Putative quorum-sensing-regulated virulence factor CFSAN000658_RS20715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CFSAN000658_RS20715 PF01653 NAD-dependent DNA ligase adenylation domain CFSAN000658_RS20715 PF00533 BRCA1 C Terminus (BRCT) domain CFSAN000658_RS20715 PF12826 Helix-hairpin-helix motif CFSAN000658_RS20715 PF03120 NAD-dependent DNA ligase OB-fold domain CFSAN000658_RS20720 PF04354 ZipA, C-terminal FtsZ-binding domain CFSAN000658_RS20730 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS20740 PF00381 PTS HPr component phosphorylation site CFSAN000658_RS20745 PF00391 PEP-utilising enzyme, mobile domain CFSAN000658_RS20745 PF02896 PEP-utilising enzyme, TIM barrel domain CFSAN000658_RS20745 PF05524 PEP-utilising enzyme, N-terminal CFSAN000658_RS20750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CFSAN000658_RS20760 PF08543 Phosphomethylpyrimidine kinase CFSAN000658_RS20765 PF00155 Aminotransferase class I and II CFSAN000658_RS20765 PF00392 Bacterial regulatory proteins, gntR family CFSAN000658_RS20770 PF00117 Glutamine amidotransferase class-I CFSAN000658_RS20775 PF17263 Family of unknown function (DUF5329) CFSAN000658_RS20780 PF00291 Pyridoxal-phosphate dependent enzyme CFSAN000658_RS20785 PF00005 ABC transporter CFSAN000658_RS20790 PF00528 Binding-protein-dependent transport system inner membrane component CFSAN000658_RS20810 PF04261 Dyp-type peroxidase family CFSAN000658_RS20815 PF06572 Protein of unknown function (DUF1131) CFSAN000658_RS20825 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS20830 PF01520 N-acetylmuramoyl-L-alanine amidase CFSAN000658_RS20835 PF01218 Coproporphyrinogen III oxidase CFSAN000658_RS20840 PF12833 Helix-turn-helix domain CFSAN000658_RS20845 PF00936 BMC domain CFSAN000658_RS20845 PF16365 Ethanolamine utilization protein EutK C-terminus CFSAN000658_RS20850 PF00936 BMC domain CFSAN000658_RS20855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CFSAN000658_RS20860 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CFSAN000658_RS20865 PF06277 Ethanolamine utilisation protein EutA CFSAN000658_RS20870 PF04346 Ethanolamine utilisation protein, EutH CFSAN000658_RS20875 PF00465 Iron-containing alcohol dehydrogenase CFSAN000658_RS20885 PF00171 Aldehyde dehydrogenase family CFSAN000658_RS20890 PF03319 Ethanolamine utilisation protein EutN/carboxysome CFSAN000658_RS20895 PF00936 BMC domain CFSAN000658_RS20900 PF01515 Phosphate acetyl/butaryl transferase CFSAN000658_RS20905 PF01923 Cobalamin adenosyltransferase CFSAN000658_RS20910 PF06249 Ethanolamine utilisation protein EutQ CFSAN000658_RS20915 PF10662 Ethanolamine utilisation - propanediol utilisation CFSAN000658_RS20920 PF00936 BMC domain CFSAN000658_RS20925 PF03949 Malic enzyme, NAD binding domain CFSAN000658_RS20925 PF00390 Malic enzyme, N-terminal domain CFSAN000658_RS20925 PF01515 Phosphate acetyl/butaryl transferase CFSAN000658_RS20930 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFSAN000658_RS20935 PF00456 Transketolase, thiamine diphosphate binding domain CFSAN000658_RS20935 PF02779 Transketolase, pyrimidine binding domain CFSAN000658_RS20935 PF02780 Transketolase, C-terminal domain CFSAN000658_RS20945 PF06674 Protein of unknown function (DUF1176) CFSAN000658_RS20950 PF00293 NUDIX domain CFSAN000658_RS20955 PF00144 Beta-lactamase CFSAN000658_RS20960 PF13247 4Fe-4S dicluster domain CFSAN000658_RS20960 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFSAN000658_RS20960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFSAN000658_RS20965 PF00672 HAMP domain CFSAN000658_RS20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS20965 PF07730 Histidine kinase CFSAN000658_RS20965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CFSAN000658_RS20970 PF00873 AcrB/AcrD/AcrF family CFSAN000658_RS20975 PF03960 ArsC family CFSAN000658_RS20980 PF01546 Peptidase family M20/M25/M40 CFSAN000658_RS20980 PF07687 Peptidase dimerisation domain CFSAN000658_RS20985 PF13980 Uncharacterised protein family (UPF0370) CFSAN000658_RS20990 PF13718 GNAT acetyltransferase 2 CFSAN000658_RS20990 PF08351 Domain of unknown function (DUF1726) CFSAN000658_RS20990 PF05127 Helicase CFSAN000658_RS20990 PF17176 tRNA-binding domain CFSAN000658_RS20995 PF04228 Putative neutral zinc metallopeptidase CFSAN000658_RS21000 PF01259 SAICAR synthetase CFSAN000658_RS21005 PF06804 NlpB/DapX lipoprotein CFSAN000658_RS21010 PF00701 Dihydrodipicolinate synthetase family CFSAN000658_RS21015 PF01842 ACT domain CFSAN000658_RS21020 PF00578 AhpC/TSA family CFSAN000658_RS21025 PF02595 Glycerate kinase family CFSAN000658_RS21035 PF13556 PucR C-terminal helix-turn-helix domain CFSAN000658_RS21035 PF17853 GGDEF-like domain CFSAN000658_RS21035 PF05651 Putative sugar diacid recognition CFSAN000658_RS21040 PF01594 AI-2E family transporter CFSAN000658_RS21045 PF01435 Peptidase family M48 CFSAN000658_RS21050 PF03960 ArsC family CFSAN000658_RS21055 PF00308 Bacterial dnaA protein CFSAN000658_RS21060 PF00860 Permease family CFSAN000658_RS21070 PF02769 AIR synthase related protein, C-terminal domain CFSAN000658_RS21070 PF00586 AIR synthase related protein, N-terminal domain CFSAN000658_RS21075 PF00551 Formyl transferase CFSAN000658_RS21080 PF13089 Polyphosphate kinase N-terminal domain CFSAN000658_RS21080 PF13090 Polyphosphate kinase C-terminal domain 2 CFSAN000658_RS21080 PF02503 Polyphosphate kinase middle domain CFSAN000658_RS21080 PF17941 Polyphosphate kinase C-terminal domain 1 CFSAN000658_RS21085 PF02541 Ppx/GppA phosphatase family CFSAN000658_RS21090 PF00563 EAL domain CFSAN000658_RS21090 PF05231 MASE1 CFSAN000658_RS21100 PF11119 Protein of unknown function (DUF2633) CFSAN000658_RS21105 PF05433 Glycine zipper 2TM domain CFSAN000658_RS21110 PF17358 Family of unknown function (DUF5384) CFSAN000658_RS21165 PF00478 IMP dehydrogenase / GMP reductase domain CFSAN000658_RS21165 PF00571 CBS domain CFSAN000658_RS21170 PF13742 OB-fold nucleic acid binding domain CFSAN000658_RS21170 PF02601 Exonuclease VII, large subunit CFSAN000658_RS21175 PF03797 Autotransporter beta-domain CFSAN000658_RS21195 PF02369 Bacterial Ig-like domain (group 1) CFSAN000658_RS21195 PF02368 Bacterial Ig-like domain (group 2) CFSAN000658_RS21195 PF11924 Inverse autotransporter, beta-domain CFSAN000658_RS21195 PF01476 LysM domain CFSAN000658_RS21195 PF07979 Intimin C-type lectin domain CFSAN000658_RS21200 PF07191 zinc-ribbons CFSAN000658_RS21205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CFSAN000658_RS21205 PF01926 50S ribosome-binding GTPase CFSAN000658_RS21210 PF13360 PQQ-like domain CFSAN000658_RS21215 PF09976 Tetratricopeptide repeat-like domain CFSAN000658_RS21220 PF03129 Anticodon binding domain CFSAN000658_RS21220 PF13393 Histidyl-tRNA synthetase CFSAN000658_RS21225 PF04551 GcpE protein CFSAN000658_RS21230 PF13464 Domain of unknown function (DUF4115) CFSAN000658_RS21235 PF04055 Radical SAM superfamily CFSAN000658_RS21240 PF00334 Nucleoside diphosphate kinase CFSAN000658_RS21255 PF12800 4Fe-4S binding domain CFSAN000658_RS21255 PF13247 4Fe-4S dicluster domain CFSAN000658_RS21260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS21260 PF00384 Molybdopterin oxidoreductase CFSAN000658_RS21260 PF01568 Molydopterin dinucleotide binding domain CFSAN000658_RS21265 PF00905 Penicillin binding protein transpeptidase domain CFSAN000658_RS21265 PF06832 Penicillin-Binding Protein C-terminus Family CFSAN000658_RS21265 PF00912 Transglycosylase CFSAN000658_RS21270 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CFSAN000658_RS21270 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CFSAN000658_RS21270 PF07678 A-macroglobulin TED domain CFSAN000658_RS21270 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CFSAN000658_RS21270 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CFSAN000658_RS21270 PF01835 MG2 domain CFSAN000658_RS21270 PF00207 Alpha-2-macroglobulin family CFSAN000658_RS21270 PF07703 Alpha-2-macroglobulin bait region domain CFSAN000658_RS21270 PF17962 Bacterial macroglobulin domain 6 CFSAN000658_RS21275 PF00581 Rhodanese-like domain CFSAN000658_RS21280 PF14581 SseB protein C-terminal domain CFSAN000658_RS21280 PF07179 SseB protein N-terminal domain CFSAN000658_RS21285 PF12404 Peptidase CFSAN000658_RS21285 PF00883 Cytosol aminopeptidase family, catalytic domain CFSAN000658_RS21290 PF04384 Iron-sulphur cluster assembly CFSAN000658_RS21295 PF00111 2Fe-2S iron-sulfur cluster binding domain CFSAN000658_RS21300 PF00012 Hsp70 protein CFSAN000658_RS21305 PF07743 HSCB C-terminal oligomerisation domain CFSAN000658_RS21310 PF01521 Iron-sulphur cluster biosynthesis CFSAN000658_RS21315 PF01592 NifU-like N terminal domain CFSAN000658_RS21320 PF00266 Aminotransferase class-V CFSAN000658_RS21325 PF02082 Transcriptional regulator CFSAN000658_RS21330 PF00588 SpoU rRNA Methylase family CFSAN000658_RS21335 PF00459 Inositol monophosphatase family CFSAN000658_RS21340 PF12146 Serine aminopeptidase, S33 CFSAN000658_RS21345 PF17179 4Fe-4S dicluster domain CFSAN000658_RS21350 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS21350 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CFSAN000658_RS21355 PF13187 4Fe-4S dicluster domain CFSAN000658_RS21355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFSAN000658_RS21355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFSAN000658_RS21360 PF03824 High-affinity nickel-transport protein CFSAN000658_RS21370 PF00874 PRD domain CFSAN000658_RS21375 PF12832 MFS_1 like family CFSAN000658_RS21380 PF00464 Serine hydroxymethyltransferase CFSAN000658_RS21385 PF00175 Oxidoreductase NAD-binding domain CFSAN000658_RS21385 PF00042 Globin CFSAN000658_RS21385 PF00970 Oxidoreductase FAD-binding domain CFSAN000658_RS21390 PF00486 Transcriptional regulatory protein, C terminal CFSAN000658_RS21390 PF18500 CadC C-terminal domain 1 CFSAN000658_RS21395 PF13520 Amino acid permease CFSAN000658_RS21400 PF01276 Orn/Lys/Arg decarboxylase, major domain CFSAN000658_RS21400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFSAN000658_RS21400 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CFSAN000658_RS21405 PF00854 POT family CFSAN000658_RS21410 PF00543 Nitrogen regulatory protein P-II CFSAN000658_RS21415 PF00158 Sigma-54 interaction domain CFSAN000658_RS21415 PF00072 Response regulator receiver domain CFSAN000658_RS21420 PF13942 YfhG lipoprotein CFSAN000658_RS21425 PF00512 His Kinase A (phospho-acceptor) domain CFSAN000658_RS21425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFSAN000658_RS21430 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CFSAN000658_RS21430 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CFSAN000658_RS21430 PF02769 AIR synthase related protein, C-terminal domain CFSAN000658_RS21440 PF01464 Transglycosylase SLT domain CFSAN000658_RS21440 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFSAN000658_RS21445 PF14437 MafB19-like deaminase CFSAN000658_RS21455 PF00367 phosphotransferase system, EIIB CFSAN000658_RS21455 PF02378 Phosphotransferase system, EIIC CFSAN000658_RS21460 PF01380 SIS domain CFSAN000658_RS21465 PF01418 Helix-turn-helix domain, rpiR family CFSAN000658_RS21465 PF01380 SIS domain CFSAN000658_RS21470 PF02558 Ketopantoate reductase PanE/ApbA CFSAN000658_RS21470 PF08546 Ketopantoate reductase PanE/ApbA C terminal CFSAN000658_RS21475 PF07690 Major Facilitator Superfamily CFSAN000658_RS21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS21480 PF03466 LysR substrate binding domain CFSAN000658_RS21485 PF12838 4Fe-4S dicluster domain CFSAN000658_RS21490 PF01648 4'-phosphopantetheinyl transferase superfamily CFSAN000658_RS21495 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CFSAN000658_RS21500 PF02565 Recombination protein O C terminal CFSAN000658_RS21500 PF11967 Recombination protein O N terminal CFSAN000658_RS21505 PF01926 50S ribosome-binding GTPase CFSAN000658_RS21505 PF07650 KH domain CFSAN000658_RS21510 PF00035 Double-stranded RNA binding motif CFSAN000658_RS21510 PF14622 Ribonuclease-III-like CFSAN000658_RS21515 PF10502 Signal peptidase, peptidase S26 CFSAN000658_RS21520 PF00679 Elongation factor G C-terminus CFSAN000658_RS21520 PF00009 Elongation factor Tu GTP binding domain CFSAN000658_RS21520 PF03144 Elongation factor Tu domain 2 CFSAN000658_RS21520 PF06421 GTP-binding protein LepA C-terminus CFSAN000658_RS21530 PF17188 MucB/RseB C-terminal domain CFSAN000658_RS21530 PF03888 MucB/RseB N-terminal domain CFSAN000658_RS21535 PF03873 Anti sigma-E protein RseA, C-terminal domain CFSAN000658_RS21535 PF03872 Anti sigma-E protein RseA, N-terminal domain CFSAN000658_RS21540 PF04542 Sigma-70 region 2 CFSAN000658_RS21540 PF08281 Sigma-70, region 4 CFSAN000658_RS21545 PF02910 Fumarate reductase flavoprotein C-term CFSAN000658_RS21545 PF00890 FAD binding domain CFSAN000658_RS21550 PF05175 Methyltransferase small domain CFSAN000658_RS21555 PF00271 Helicase conserved C-terminal domain CFSAN000658_RS21555 PF00270 DEAD/DEAH box helicase CFSAN000658_RS21560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFSAN000658_RS21560 PF03466 LysR substrate binding domain CFSAN000658_RS21565 PF01810 LysE type translocator CFSAN000658_RS21570 PF01228 Glycine radical CFSAN000658_RS21575 PF03167 Uracil DNA glycosylase superfamily CFSAN000658_RS21580 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFSAN000658_RS21580 PF00588 SpoU rRNA Methylase family CFSAN000658_RS21585 PF00085 Thioredoxin CFSAN000658_RS21590 PF03942 DTW domain CFSAN000658_RS21595 PF13607 Succinyl-CoA ligase like flavodoxin domain CFSAN000658_RS21595 PF00583 Acetyltransferase (GNAT) family CFSAN000658_RS21595 PF13380 CoA binding domain CFSAN000658_RS21600 PF13091 PLD-like domain CFSAN000658_RS21605 PF10043 Predicted periplasmic lipoprotein (DUF2279) CFSAN000658_RS21610 PF00083 Sugar (and other) transporter CFSAN000658_RS21620 PF13333 Integrase core domain CFSAN000658_RS21620 PF13276 HTH-like domain CFSAN000658_RS21620 PF00665 Integrase core domain CFSAN000658_RS21650 PF00004 ATPase family associated with various cellular activities (AAA) CFSAN000658_RS21650 PF07724 AAA domain (Cdc48 subfamily) CFSAN000658_RS21650 PF17871 AAA lid domain CFSAN000658_RS21650 PF02861 Clp amino terminal domain, pathogenicity island component CFSAN000658_RS21650 PF10431 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS21655 PF02578 Multi-copper polyphenol oxidoreductase laccase CFSAN000658_RS21660 PF00849 RNA pseudouridylate synthase CFSAN000658_RS21660 PF01479 S4 domain CFSAN000658_RS21665 PF13525 Outer membrane lipoprotein CFSAN000658_RS21670 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFSAN000658_RS21675 PF00800 Prephenate dehydratase CFSAN000658_RS21675 PF01817 Chorismate mutase type II CFSAN000658_RS21680 PF08450 SMP-30/Gluconolactonase/LRE-like region CFSAN000658_RS21685 PF01817 Chorismate mutase type II CFSAN000658_RS21685 PF02153 Prephenate dehydrogenase CFSAN000658_RS21690 PF00793 DAHP synthetase I family CFSAN000658_RS21695 PF13689 YfiR/HmsC-like CFSAN000658_RS21700 PF17152 Periplasmic sensor domain CFSAN000658_RS21700 PF00990 Diguanylate cyclase, GGDEF domain CFSAN000658_RS21705 PF01245 Ribosomal protein L19 CFSAN000658_RS21710 PF01746 tRNA (Guanine-1)-methyltransferase CFSAN000658_RS21715 PF01782 RimM N-terminal domain CFSAN000658_RS21715 PF05239 PRC-barrel domain CFSAN000658_RS21720 PF00886 Ribosomal protein S16 CFSAN000658_RS21725 PF02978 Signal peptide binding domain CFSAN000658_RS21725 PF02881 SRP54-type protein, helical bundle domain CFSAN000658_RS21725 PF00448 SRP54-type protein, GTPase domain CFSAN000658_RS21730 PF01578 Cytochrome C assembly protein CFSAN000658_RS21735 PF01595 Cyclin M transmembrane N-terminal domain CFSAN000658_RS21735 PF03471 Transporter associated domain CFSAN000658_RS21735 PF00571 CBS domain CFSAN000658_RS21745 PF01025 GrpE CFSAN000658_RS21750 PF01513 ATP-NAD kinase CFSAN000658_RS21755 PF02463 RecF/RecN/SMC N terminal domain CFSAN000658_RS21760 PF04355 SmpA / OmlA family CFSAN000658_RS21765 PF03658 RnfH family Ubiquitin CFSAN000658_RS21770 PF03364 Polyketide cyclase / dehydrase and lipid transport CFSAN000658_RS21775 PF01668 SmpB protein CFSAN000658_RS21790 PF00005 ABC transporter CFSAN000658_RS21790 PF00664 ABC transporter transmembrane region CFSAN000658_RS21795 PF00529 HlyD membrane-fusion protein of T1SS CFSAN000658_RS21795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFSAN000658_RS21800 PF13356 Arm DNA-binding domain CFSAN000658_RS21800 PF00589 Phage integrase family CFSAN000658_RS21815 PF04606 Ogr/Delta-like zinc finger