CFSAN000658_RS00025 SM00493 CFSAN000658_RS00025 CFSAN000658_RS00025 SM00778 Zinc-binding domain of primase-helicase CFSAN000658_RS00025 SM00885 D5 N terminal like CFSAN000658_RS00040 SM00857 Resolvase, N terminal domain CFSAN000658_RS00050 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS00100 SM00387 Histidine kinase-like ATPases CFSAN000658_RS00100 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS00105 SM00448 cheY-homologous receiver domain CFSAN000658_RS00105 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS00155 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS00155 SM00895 CFSAN000658_RS00155 CFSAN000658_RS00160 SM00257 Lysin motif CFSAN000658_RS00160 SM00749 bacterial OsmY and nodulation domain CFSAN000658_RS00170 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFSAN000658_RS00175 SM00450 Rhodanese Homology Domain CFSAN000658_RS00185 SM00528 Domain in histone-like proteins of HNS family CFSAN000658_RS00205 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS00240 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00260 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS00330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFSAN000658_RS00340 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00390 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS00390 SM01134 CFSAN000658_RS00390 CFSAN000658_RS00400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFSAN000658_RS00400 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00405 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS00500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFSAN000658_RS00500 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00515 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00540 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS00580 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS00585 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS00595 SM00194 Protein tyrosine phosphatase, catalytic domain CFSAN000658_RS00595 SM00404 Protein tyrosine phosphatase, catalytic domain motif CFSAN000658_RS00675 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS00700 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS00735 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CFSAN000658_RS00735 SM00534 ATPase domain of DNA mismatch repair MUTS family CFSAN000658_RS00770 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS00785 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS00785 SM01134 CFSAN000658_RS00785 CFSAN000658_RS00790 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS00815 SM00257 Lysin motif CFSAN000658_RS00885 SM01101 CFSAN000658_RS00885 CFSAN000658_RS00910 SM00487 DEAD-like helicases superfamily CFSAN000658_RS00940 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS00950 SM01192 CFSAN000658_RS00950 CFSAN000658_RS00950 SM01193 CFSAN000658_RS00950 CFSAN000658_RS00975 SM00954 Region found in RelA / SpoT proteins CFSAN000658_RS00985 SM00073 Histidine Phosphotransfer domain CFSAN000658_RS00985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS00985 SM00387 Histidine kinase-like ATPases CFSAN000658_RS00985 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS00985 SM00448 cheY-homologous receiver domain CFSAN000658_RS00995 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS01000 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS01050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFSAN000658_RS01050 SM00475 5'-3' exonuclease CFSAN000658_RS01060 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS01085 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS01085 SM01134 CFSAN000658_RS01085 CFSAN000658_RS01130 SM00925 MltA specific insert domain CFSAN000658_RS01145 SM00646 CFSAN000658_RS01145 CFSAN000658_RS01155 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS01210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFSAN000658_RS01225 SM00927 DNA mismatch repair enzyme MutH CFSAN000658_RS01250 SM00563 Phosphate acyltransferases CFSAN000658_RS01255 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS01260 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS01380 SM00257 Lysin motif CFSAN000658_RS01395 SM00937 CFSAN000658_RS01395 CFSAN000658_RS01445 SM01022 CFSAN000658_RS01445 CFSAN000658_RS01485 SM01011 Aminopeptidase P, N-terminal domain CFSAN000658_RS01545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS01565 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS01570 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS01605 SM00861 Transketolase, pyrimidine binding domain CFSAN000658_RS01645 SM00731 SprT homologues. CFSAN000658_RS01670 SM00732 Likely ribonuclease with RNase H fold. CFSAN000658_RS01675 SM00346 helix_turn_helix isocitrate lyase regulation CFSAN000658_RS01680 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS01695 SM01152 CFSAN000658_RS01695 CFSAN000658_RS01705 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS01715 SM00870 CFSAN000658_RS01715 CFSAN000658_RS01735 SM00478 endonuclease III CFSAN000658_RS01735 SM00525 CFSAN000658_RS01735 CFSAN000658_RS01810 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS01900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS01970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS01970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS02025 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS02050 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS02055 SM01324 CFSAN000658_RS02055 CFSAN000658_RS02080 SM00563 Phosphate acyltransferases CFSAN000658_RS02085 SM00434 DNA Topoisomerase IV CFSAN000658_RS02090 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS02090 SM00871 Bacterial transcription activator, effector binding domain CFSAN000658_RS02100 SM00448 cheY-homologous receiver domain CFSAN000658_RS02100 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS02105 SM00387 Histidine kinase-like ATPases CFSAN000658_RS02105 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS02120 SM00387 Histidine kinase-like ATPases CFSAN000658_RS02120 SM00433 TopoisomeraseII CFSAN000658_RS02210 SM00244 prohibitin homologues CFSAN000658_RS02225 SM01118 CFSAN000658_RS02225 CFSAN000658_RS02230 SM00287 Bacterial SH3 domain homologues CFSAN000658_RS02235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS02245 SM00905 Dihydroneopterin aldolase CFSAN000658_RS02250 SM01207 CFSAN000658_RS02250 CFSAN000658_RS02265 SM00400 zinc finger CFSAN000658_RS02265 SM00493 CFSAN000658_RS02265 CFSAN000658_RS02265 SM00766 DNA primase DnaG DnaB-binding CFSAN000658_RS02300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS02300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS02305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFSAN000658_RS02305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS02465 SM00858 CFSAN000658_RS02465 CFSAN000658_RS02475 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS02475 SM01134 CFSAN000658_RS02475 CFSAN000658_RS02520 SM00829 Enoylreductase CFSAN000658_RS02525 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS02525 SM01134 CFSAN000658_RS02525 CFSAN000658_RS02550 SM00749 bacterial OsmY and nodulation domain CFSAN000658_RS02555 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS02570 SM00465 GIY-YIG type nucleases (URI domain) CFSAN000658_RS02605 SM00487 DEAD-like helicases superfamily CFSAN000658_RS02605 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS02610 SM00028 Tetratricopeptide repeats CFSAN000658_RS02615 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS02615 SM00322 K homology RNA-binding domain CFSAN000658_RS02620 SM01387 CFSAN000658_RS02620 CFSAN000658_RS02640 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS02640 SM00322 K homology RNA-binding domain CFSAN000658_RS02690 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS02700 SM01103 CFSAN000658_RS02700 CFSAN000658_RS02780 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS02810 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS02855 SM00073 Histidine Phosphotransfer domain CFSAN000658_RS02855 SM00091 PAS domain CFSAN000658_RS02855 SM00387 Histidine kinase-like ATPases CFSAN000658_RS02855 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS02855 SM00448 cheY-homologous receiver domain CFSAN000658_RS02860 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS02915 SM01130 CFSAN000658_RS02915 CFSAN000658_RS02920 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS02920 SM00895 CFSAN000658_RS02920 CFSAN000658_RS02955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFSAN000658_RS02960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFSAN000658_RS03000 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS03000 SM00895 CFSAN000658_RS03000 CFSAN000658_RS03005 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS03065 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS03095 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS03095 SM00267 diguanylate cyclase CFSAN000658_RS03100 SM00829 Enoylreductase CFSAN000658_RS03120 SM00878 Biotin carboxylase C-terminal domain CFSAN000658_RS03160 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS03160 SM00267 diguanylate cyclase CFSAN000658_RS03280 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS03295 SM00662 RNA polymerases D CFSAN000658_RS03300 SM00363 S4 RNA-binding domain CFSAN000658_RS03300 SM01390 CFSAN000658_RS03300 CFSAN000658_RS03365 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CFSAN000658_RS03370 SM01374 CFSAN000658_RS03370 CFSAN000658_RS03390 SM00322 K homology RNA-binding domain CFSAN000658_RS03405 SM01382 CFSAN000658_RS03405 CFSAN000658_RS03405 SM01383 CFSAN000658_RS03405 CFSAN000658_RS03425 SM01403 CFSAN000658_RS03425 CFSAN000658_RS03450 SM00838 Elongation factor G C-terminus CFSAN000658_RS03450 SM00889 Elongation factor G, domain IV CFSAN000658_RS03515 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03550 SM00100 Cyclic nucleotide-monophosphate binding domain CFSAN000658_RS03550 SM00419 helix_turn_helix, cAMP Regulatory protein CFSAN000658_RS03610 SM00869 Autotransporter beta-domain CFSAN000658_RS03655 SM00965 Secretin and TonB N terminus short domain CFSAN000658_RS03700 SM00363 S4 RNA-binding domain CFSAN000658_RS03720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS03720 SM00387 Histidine kinase-like ATPases CFSAN000658_RS03720 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS03725 SM00448 cheY-homologous receiver domain CFSAN000658_RS03725 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS03735 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS03735 SM00732 Likely ribonuclease with RNase H fold. CFSAN000658_RS03740 SM00899 CFSAN000658_RS03740 CFSAN000658_RS03790 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS03795 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS03795 SM01134 CFSAN000658_RS03795 CFSAN000658_RS03805 SM00450 Rhodanese Homology Domain CFSAN000658_RS03830 SM00642 Alpha-amylase domain CFSAN000658_RS03835 SM00642 Alpha-amylase domain CFSAN000658_RS03840 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS03855 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS03875 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS03910 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03935 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03940 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03985 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03990 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS03990 SM00962 SRP54-type protein, GTPase domain CFSAN000658_RS03990 SM00963 SRP54-type protein, helical bundle domain CFSAN000658_RS04020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS04020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS04020 SM00319 Homologues of the ligand binding domain of Tar CFSAN000658_RS04065 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS04110 SM00014 Acid phosphatase homologues CFSAN000658_RS04125 SM00870 CFSAN000658_RS04125 CFSAN000658_RS04145 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS04145 SM00866 CFSAN000658_RS04145 CFSAN000658_RS04165 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS04190 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS04210 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS04210 SM00267 diguanylate cyclase CFSAN000658_RS04215 SM00028 Tetratricopeptide repeats CFSAN000658_RS04275 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS04280 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS04310 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS04380 SM00357 Cold shock protein domain CFSAN000658_RS04455 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS04460 SM00047 Lysozyme subfamily 2 CFSAN000658_RS04470 SM00642 Alpha-amylase domain CFSAN000658_RS04485 SM00346 helix_turn_helix isocitrate lyase regulation CFSAN000658_RS04525 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS04535 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS04540 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS04620 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS04620 SM00895 CFSAN000658_RS04620 CFSAN000658_RS04635 SM00971 Serine acetyltransferase, N-terminal CFSAN000658_RS04655 SM00450 Rhodanese Homology Domain CFSAN000658_RS04680 SM00829 Enoylreductase CFSAN000658_RS04770 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CFSAN000658_RS04770 SM01232 CFSAN000658_RS04770 CFSAN000658_RS04825 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS04835 SM00532 Ligase N family CFSAN000658_RS04840 SM00072 Guanylate kinase homologues. CFSAN000658_RS04845 SM01409 CFSAN000658_RS04845 CFSAN000658_RS04850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS04850 SM00954 Region found in RelA / SpoT proteins CFSAN000658_RS04860 SM00487 DEAD-like helicases superfamily CFSAN000658_RS04860 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS04905 SM00869 Autotransporter beta-domain CFSAN000658_RS04915 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS04930 SM00831 Cation transporter/ATPase, N-terminus CFSAN000658_RS04980 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05005 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS05045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS05045 SM00866 CFSAN000658_RS05045 CFSAN000658_RS05065 SM00387 Histidine kinase-like ATPases CFSAN000658_RS05070 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS05070 SM00448 cheY-homologous receiver domain CFSAN000658_RS05090 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS05090 SM01134 CFSAN000658_RS05090 CFSAN000658_RS05220 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05225 SM01235 CFSAN000658_RS05225 CFSAN000658_RS05245 SM00448 cheY-homologous receiver domain CFSAN000658_RS05245 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS05255 SM00073 Histidine Phosphotransfer domain CFSAN000658_RS05255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS05255 SM00387 Histidine kinase-like ATPases CFSAN000658_RS05255 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS05255 SM00448 cheY-homologous receiver domain CFSAN000658_RS05285 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS05295 SM00387 Histidine kinase-like ATPases CFSAN000658_RS05295 SM00433 TopoisomeraseII CFSAN000658_RS05305 SM00480 DNA polymerase III beta subunit CFSAN000658_RS05310 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05310 SM00760 Bacterial dnaA protein helix-turn-helix domain CFSAN000658_RS05325 SM01234 CFSAN000658_RS05325 CFSAN000658_RS05375 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05430 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05475 SM01228 CFSAN000658_RS05475 CFSAN000658_RS05485 SM00344 helix_turn_helix ASNC type CFSAN000658_RS05495 SM00327 von Willebrand factor (vWF) type A domain CFSAN000658_RS05500 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05515 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05535 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS05545 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS05545 SM00895 CFSAN000658_RS05545 CFSAN000658_RS05590 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05665 SM00487 DEAD-like helicases superfamily CFSAN000658_RS05665 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS05675 SM00357 Cold shock protein domain CFSAN000658_RS05675 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS05675 SM00959 Rho termination factor, N-terminal domain CFSAN000658_RS05700 SM00984 UDP binding domain CFSAN000658_RS05795 SM01219 CFSAN000658_RS05795 CFSAN000658_RS05860 SM00341 Helicase and RNase D C-terminal CFSAN000658_RS05860 SM00487 DEAD-like helicases superfamily CFSAN000658_RS05860 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS05860 SM00956 CFSAN000658_RS05860 CFSAN000658_RS05955 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CFSAN000658_RS06055 SM00563 Phosphate acyltransferases CFSAN000658_RS06065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFSAN000658_RS06065 SM00474 3'-5' exonuclease CFSAN000658_RS06065 SM00475 5'-3' exonuclease CFSAN000658_RS06065 SM00482 DNA polymerase A domain CFSAN000658_RS06085 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS06090 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS06090 SM00448 cheY-homologous receiver domain CFSAN000658_RS06095 SM00091 PAS domain CFSAN000658_RS06095 SM00387 Histidine kinase-like ATPases CFSAN000658_RS06095 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS06100 SM01230 CFSAN000658_RS06100 CFSAN000658_RS06140 SM01133 CFSAN000658_RS06140 CFSAN000658_RS06155 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS06155 SM01134 CFSAN000658_RS06155 CFSAN000658_RS06200 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS06225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS06250 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS06265 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS06280 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS06285 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS06335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS06335 SM00387 Histidine kinase-like ATPases CFSAN000658_RS06335 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS06340 SM00448 cheY-homologous receiver domain CFSAN000658_RS06340 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS06385 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS06385 SM00866 CFSAN000658_RS06385 CFSAN000658_RS06410 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS06430 SM01133 CFSAN000658_RS06430 CFSAN000658_RS06495 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS06495 SM01086 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS06510 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS06515 SM00487 DEAD-like helicases superfamily CFSAN000658_RS06515 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS06585 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS06605 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS06730 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CFSAN000658_RS06730 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CFSAN000658_RS06735 SM00649 Ribosomal protein L11/L12 CFSAN000658_RS06760 SM00663 RNA polymerase I subunit A N-terminus CFSAN000658_RS06780 SM00876 Biotin and Thiamin Synthesis associated domain CFSAN000658_RS06835 SM00411 bacterial (prokaryotic) histone like domain CFSAN000658_RS06850 SM00387 Histidine kinase-like ATPases CFSAN000658_RS06850 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS06855 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS06855 SM00448 cheY-homologous receiver domain CFSAN000658_RS06860 SM01209 CFSAN000658_RS06860 CFSAN000658_RS06860 SM01210 CFSAN000658_RS06860 CFSAN000658_RS06865 SM00798 AICARFT/IMPCHase bienzyme CFSAN000658_RS06865 SM00851 MGS-like domain CFSAN000658_RS06915 SM01022 CFSAN000658_RS06915 CFSAN000658_RS06920 SM00346 helix_turn_helix isocitrate lyase regulation CFSAN000658_RS06925 SM01018 B12 binding domain CFSAN000658_RS06950 SM00363 S4 RNA-binding domain CFSAN000658_RS06960 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS06960 SM01134 CFSAN000658_RS06960 CFSAN000658_RS07045 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS07070 SM00563 Phosphate acyltransferases CFSAN000658_RS07120 SM00829 Enoylreductase CFSAN000658_RS07125 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS07130 SM01005 Alanine racemase, C-terminal domain CFSAN000658_RS07205 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS07220 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS07225 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS07310 SM00028 Tetratricopeptide repeats CFSAN000658_RS07320 SM00671 Sel1-like repeats. CFSAN000658_RS07330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS07365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS07365 SM00387 Histidine kinase-like ATPases CFSAN000658_RS07365 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS07370 SM00448 cheY-homologous receiver domain CFSAN000658_RS07370 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS07385 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS07400 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS07430 SM00448 cheY-homologous receiver domain CFSAN000658_RS07435 SM00091 PAS domain CFSAN000658_RS07435 SM00387 Histidine kinase-like ATPases CFSAN000658_RS07440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS07475 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS07480 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS07500 SM00014 Acid phosphatase homologues CFSAN000658_RS07550 SM00883 Chaperonin 10 Kd subunit CFSAN000658_RS07575 SM00841 Elongation factor P, C-terminal CFSAN000658_RS07575 SM01185 CFSAN000658_RS07575 CFSAN000658_RS07590 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS07650 SM00479 CFSAN000658_RS07650 CFSAN000658_RS07655 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS07655 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFSAN000658_RS07690 SM00646 CFSAN000658_RS07690 CFSAN000658_RS07695 SM00853 MutL C terminal dimerisation domain CFSAN000658_RS07695 SM01340 CFSAN000658_RS07695 CFSAN000658_RS07715 SM00244 prohibitin homologues CFSAN000658_RS07720 SM00244 prohibitin homologues CFSAN000658_RS07730 SM00788 Adenylosuccinate synthetase CFSAN000658_RS07740 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS07740 SM00357 Cold shock protein domain CFSAN000658_RS07740 SM00955 CFSAN000658_RS07740 CFSAN000658_RS07745 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFSAN000658_RS07800 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS07800 SM01134 CFSAN000658_RS07800 CFSAN000658_RS07825 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS07835 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS07930 SM01091 Transporter associated domain CFSAN000658_RS08065 SM00642 Alpha-amylase domain CFSAN000658_RS08075 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS08080 SM00831 Cation transporter/ATPase, N-terminus CFSAN000658_RS08195 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS08220 SM00829 Enoylreductase CFSAN000658_RS08285 SM00493 CFSAN000658_RS08285 CFSAN000658_RS08285 SM00778 Zinc-binding domain of primase-helicase CFSAN000658_RS08285 SM00885 D5 N terminal like CFSAN000658_RS08355 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS08355 SM00895 CFSAN000658_RS08355 CFSAN000658_RS08450 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS08455 SM00833 Cobalamin synthesis protein cobW C-terminal domain CFSAN000658_RS08470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS08470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS08470 SM00319 Homologues of the ligand binding domain of Tar CFSAN000658_RS08485 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS08505 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS08510 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS08525 SM00267 diguanylate cyclase CFSAN000658_RS08575 SM00749 bacterial OsmY and nodulation domain CFSAN000658_RS08605 SM01133 CFSAN000658_RS08605 CFSAN000658_RS08610 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CFSAN000658_RS08665 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS08670 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS08675 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS08695 SM00855 Phosphoglycerate mutase family CFSAN000658_RS08700 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS08700 SM00871 Bacterial transcription activator, effector binding domain CFSAN000658_RS08710 SM00448 cheY-homologous receiver domain CFSAN000658_RS08710 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS08715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS08715 SM00387 Histidine kinase-like ATPases CFSAN000658_RS08715 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS08760 SM00448 cheY-homologous receiver domain CFSAN000658_RS08760 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS08810 SM00852 Probable molybdopterin binding domain CFSAN000658_RS08835 SM00271 DnaJ molecular chaperone homology domain CFSAN000658_RS08860 SM00636 CFSAN000658_RS08860 CFSAN000658_RS08995 SM00904 Riboflavin kinase CFSAN000658_RS09030 SM00448 cheY-homologous receiver domain CFSAN000658_RS09035 SM00091 PAS domain CFSAN000658_RS09035 SM00387 Histidine kinase-like ATPases CFSAN000658_RS09060 SM00764 Citrate lyase ligase C-terminal domain CFSAN000658_RS09095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CFSAN000658_RS09100 SM00851 MGS-like domain CFSAN000658_RS09100 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFSAN000658_RS09145 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS09150 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS09225 SM00650 Ribosomal RNA adenine dimethylases CFSAN000658_RS09245 SM00271 DnaJ molecular chaperone homology domain CFSAN000658_RS09255 SM00487 DEAD-like helicases superfamily CFSAN000658_RS09255 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS09260 SM00486 DNA polymerase type-B family CFSAN000658_RS09275 SM01007 Class II Aldolase and Adducin N-terminal domain CFSAN000658_RS09290 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS09300 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS09335 SM01329 CFSAN000658_RS09335 CFSAN000658_RS09340 SM00917 LeuA allosteric (dimerisation) domain CFSAN000658_RS09365 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS09435 SM00842 Cell division protein FtsA CFSAN000658_RS09440 SM00864 Tubulin/FtsZ family, GTPase domain CFSAN000658_RS09440 SM00865 Tubulin/FtsZ family, C-terminal domain CFSAN000658_RS09455 SM00957 SecA DEAD-like domain CFSAN000658_RS09455 SM00958 SecA preprotein cross-linking domain CFSAN000658_RS09485 SM01240 CFSAN000658_RS09485 CFSAN000658_RS09510 SM00644 CFSAN000658_RS09510 CFSAN000658_RS09535 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS09535 SM00895 CFSAN000658_RS09535 CFSAN000658_RS09595 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS09595 SM01134 CFSAN000658_RS09595 CFSAN000658_RS09620 SM00564 beta-propeller repeat CFSAN000658_RS09630 SM00947 Carbonic anhydrase CFSAN000658_RS09635 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS09755 SM00487 DEAD-like helicases superfamily CFSAN000658_RS09755 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS09755 SM00847 Helicase associated domain (HA2) Add an annotation CFSAN000658_RS09770 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS09815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS09820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFSAN000658_RS09830 SM01276 CFSAN000658_RS09830 CFSAN000658_RS09850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS09895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFSAN000658_RS09905 SM00935 Outer membrane protein (OmpH-like) CFSAN000658_RS09935 SM00481 DNA polymerase alpha chain like domain CFSAN000658_RS09945 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CFSAN000658_RS09960 SM00977 TilS substrate C-terminal domain CFSAN000658_RS09975 SM01322 CFSAN000658_RS09975 CFSAN000658_RS10015 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS10015 SM00930 CFSAN000658_RS10015 CFSAN000658_RS10080 SM00257 Lysin motif CFSAN000658_RS10085 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS10100 SM00479 CFSAN000658_RS10100 CFSAN000658_RS10145 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS10145 SM01086 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS10380 SM00344 helix_turn_helix ASNC type CFSAN000658_RS10470 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFSAN000658_RS10525 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS10580 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS10630 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS10650 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS10675 SM01004 Delta-aminolevulinic acid dehydratase CFSAN000658_RS10680 SM00869 Autotransporter beta-domain CFSAN000658_RS10740 SM00267 diguanylate cyclase CFSAN000658_RS10805 SM00448 cheY-homologous receiver domain CFSAN000658_RS10805 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS10810 SM00091 PAS domain CFSAN000658_RS10810 SM00387 Histidine kinase-like ATPases CFSAN000658_RS10810 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS10825 SM00642 Alpha-amylase domain CFSAN000658_RS10850 SM01323 CFSAN000658_RS10850 CFSAN000658_RS10865 SM00507 HNH nucleases CFSAN000658_RS10920 SM00861 Transketolase, pyrimidine binding domain CFSAN000658_RS10935 SM00981 CFSAN000658_RS10935 CFSAN000658_RS10950 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS10960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS10960 SM00866 CFSAN000658_RS10960 CFSAN000658_RS11045 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11045 SM00994 ClpX C4-type zinc finger CFSAN000658_RS11045 SM01086 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS11050 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11050 SM00464 Found in ATP-dependent protease La (LON) CFSAN000658_RS11055 SM00411 bacterial (prokaryotic) histone like domain CFSAN000658_RS11095 SM00344 helix_turn_helix ASNC type CFSAN000658_RS11100 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11105 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11110 SM00938 Nitrogen regulatory protein P-II CFSAN000658_RS11135 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS11155 SM01266 CFSAN000658_RS11155 CFSAN000658_RS11215 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11225 SM00493 CFSAN000658_RS11225 CFSAN000658_RS11230 SM00387 Histidine kinase-like ATPases CFSAN000658_RS11290 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS11300 SM00244 prohibitin homologues CFSAN000658_RS11305 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11320 SM00822 CFSAN000658_RS11320 CFSAN000658_RS11330 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11350 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11350 SM00930 CFSAN000658_RS11350 CFSAN000658_RS11360 SM00450 Rhodanese Homology Domain CFSAN000658_RS11370 SM01001 AIR carboxylase CFSAN000658_RS11385 SM00840 CFSAN000658_RS11385 CFSAN000658_RS11445 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS11445 SM00448 cheY-homologous receiver domain CFSAN000658_RS11460 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS11475 SM01321 CFSAN000658_RS11475 CFSAN000658_RS11500 SM00387 Histidine kinase-like ATPases CFSAN000658_RS11510 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS11545 SM00869 Autotransporter beta-domain CFSAN000658_RS11565 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS11595 SM00923 MbtH-like protein CFSAN000658_RS11600 SM00824 Thioesterase CFSAN000658_RS11610 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11650 SM00822 CFSAN000658_RS11650 CFSAN000658_RS11680 SM00470 ParB-like nuclease domain CFSAN000658_RS11715 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS11780 SM00764 Citrate lyase ligase C-terminal domain CFSAN000658_RS11785 SM00091 PAS domain CFSAN000658_RS11785 SM00387 Histidine kinase-like ATPases CFSAN000658_RS11790 SM00448 cheY-homologous receiver domain CFSAN000658_RS11805 SM00357 Cold shock protein domain CFSAN000658_RS11825 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS11845 SM00936 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS11880 SM00855 Phosphoglycerate mutase family CFSAN000658_RS11910 SM00858 CFSAN000658_RS11910 CFSAN000658_RS11925 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11940 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS11955 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS11965 SM00116 Domain in cystathionine beta-synthase and other proteins. CFSAN000658_RS11965 SM01091 Transporter associated domain CFSAN000658_RS11980 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS12140 SM00448 cheY-homologous receiver domain CFSAN000658_RS12140 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS12145 SM00387 Histidine kinase-like ATPases CFSAN000658_RS12145 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS12190 SM00796 Allophanate hydrolase subunit 1 CFSAN000658_RS12195 SM00797 Allophanate hydrolase subunit 2 CFSAN000658_RS12245 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12270 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CFSAN000658_RS12270 SM01232 CFSAN000658_RS12270 CFSAN000658_RS12310 SM00861 Transketolase, pyrimidine binding domain CFSAN000658_RS12325 SM00881 CoA binding domain CFSAN000658_RS12450 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12455 SM00855 Phosphoglycerate mutase family CFSAN000658_RS12485 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12510 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS12540 SM00866 CFSAN000658_RS12540 CFSAN000658_RS12565 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS12565 SM00876 Biotin and Thiamin Synthesis associated domain CFSAN000658_RS12585 SM00487 DEAD-like helicases superfamily CFSAN000658_RS12585 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS12595 SM00364 Leucine-rich repeats, bacterial type CFSAN000658_RS12595 SM00369 Leucine-rich repeats, typical (most populated) subfamily CFSAN000658_RS12605 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS12610 SM00852 Probable molybdopterin binding domain CFSAN000658_RS12650 SM00155 Phospholipase D. Active site motifs. CFSAN000658_RS12675 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12690 SM00487 DEAD-like helicases superfamily CFSAN000658_RS12690 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS12695 SM00487 DEAD-like helicases superfamily CFSAN000658_RS12695 SM00488 CFSAN000658_RS12695 CFSAN000658_RS12695 SM00491 CFSAN000658_RS12695 CFSAN000658_RS12730 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12740 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS12740 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFSAN000658_RS12765 SM00529 Helix-turn-helix diphteria tox regulatory element CFSAN000658_RS12780 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12810 SM00852 Probable molybdopterin binding domain CFSAN000658_RS12820 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS12840 SM00729 Elongator protein 3, MiaB family, Radical SAM CFSAN000658_RS12855 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS12860 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS12900 SM00936 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS12905 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS12905 SM01134 CFSAN000658_RS12905 CFSAN000658_RS12910 SM00014 Acid phosphatase homologues CFSAN000658_RS12975 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13015 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS13015 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFSAN000658_RS13030 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS13030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFSAN000658_RS13035 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13050 SM00644 CFSAN000658_RS13050 CFSAN000658_RS13105 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13110 SM00357 Cold shock protein domain CFSAN000658_RS13120 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13120 SM01086 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS13150 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS13165 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13170 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13180 SM00344 helix_turn_helix ASNC type CFSAN000658_RS13185 SM00843 CFSAN000658_RS13185 CFSAN000658_RS13195 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13205 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS13290 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS13295 SM00411 bacterial (prokaryotic) histone like domain CFSAN000658_RS13310 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS13315 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13380 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS13440 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS13460 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13725 SM00981 CFSAN000658_RS13725 CFSAN000658_RS13730 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS13800 SM00851 MGS-like domain CFSAN000658_RS13810 SM00881 CoA binding domain CFSAN000658_RS13815 SM00992 Hemimethylated DNA-binding protein YccV like CFSAN000658_RS13820 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFSAN000658_RS13830 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS13900 SM00387 Histidine kinase-like ATPases CFSAN000658_RS13900 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS13905 SM00448 cheY-homologous receiver domain CFSAN000658_RS13905 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS13910 SM00095 Transthyretin CFSAN000658_RS13915 SM00903 Flavin reductase like domain CFSAN000658_RS13925 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS13965 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS13970 SM00849 Metallo-beta-lactamase superfamily CFSAN000658_RS13985 SM00271 DnaJ molecular chaperone homology domain CFSAN000658_RS14110 SM00481 DNA polymerase alpha chain like domain CFSAN000658_RS14140 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS14165 SM00506 Appr-1"-p processing enzyme CFSAN000658_RS14170 SM00155 Phospholipase D. Active site motifs. CFSAN000658_RS14210 SM00450 Rhodanese Homology Domain CFSAN000658_RS14215 SM00867 YceI-like domain CFSAN000658_RS14295 SM00858 CFSAN000658_RS14295 CFSAN000658_RS14340 SM00047 Lysozyme subfamily 2 CFSAN000658_RS14355 SM00316 Ribosomal protein S1-like RNA-binding domain CFSAN000658_RS14365 SM00363 S4 RNA-binding domain CFSAN000658_RS14395 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CFSAN000658_RS14400 SM00822 CFSAN000658_RS14400 CFSAN000658_RS14410 SM00825 Beta-ketoacyl synthase CFSAN000658_RS14530 SM00257 Lysin motif CFSAN000658_RS14535 SM00487 DEAD-like helicases superfamily CFSAN000658_RS14535 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS14535 SM00982 CFSAN000658_RS14535 CFSAN000658_RS14535 SM01058 CarD-like/TRCF domain CFSAN000658_RS14545 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS14585 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS14600 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CFSAN000658_RS14605 SM00387 Histidine kinase-like ATPases CFSAN000658_RS14610 SM00448 cheY-homologous receiver domain CFSAN000658_RS14610 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS14645 SM01329 CFSAN000658_RS14645 CFSAN000658_RS14650 SM01321 CFSAN000658_RS14650 CFSAN000658_RS14695 SM00458 Ricin-type beta-trefoil CFSAN000658_RS14700 SM00357 Cold shock protein domain CFSAN000658_RS14795 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS14800 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS14830 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS14835 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS14845 SM00830 Chorismate mutase type II CFSAN000658_RS14900 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS14920 SM00267 diguanylate cyclase CFSAN000658_RS14930 SM00763 PrkA AAA domain CFSAN000658_RS14955 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS14975 SM00870 CFSAN000658_RS14975 CFSAN000658_RS14995 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFSAN000658_RS14995 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFSAN000658_RS14995 SM00493 CFSAN000658_RS14995 CFSAN000658_RS15000 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFSAN000658_RS15050 SM00465 GIY-YIG type nucleases (URI domain) CFSAN000658_RS15080 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS15095 SM01060 CFSAN000658_RS15095 CFSAN000658_RS15155 SM00477 DNA/RNA non-specific endonuclease CFSAN000658_RS15155 SM00892 DNA/RNA non-specific endonuclease CFSAN000658_RS15160 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFSAN000658_RS15185 SM00873 B3/4 domain CFSAN000658_RS15185 SM00874 tRNA synthetase B5 domain CFSAN000658_RS15185 SM00896 Ferredoxin-fold anticodon binding domain CFSAN000658_RS15190 SM00411 bacterial (prokaryotic) histone like domain CFSAN000658_RS15205 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS15260 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS15265 SM00893 Electron transfer flavoprotein domain CFSAN000658_RS15270 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS15280 SM00882 Coenzyme A transferase CFSAN000658_RS15345 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS15365 SM00257 Lysin motif CFSAN000658_RS15395 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS15400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS15415 SM00387 Histidine kinase-like ATPases CFSAN000658_RS15415 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS15420 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS15420 SM00448 cheY-homologous receiver domain CFSAN000658_RS15435 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS15440 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS15440 SM00448 cheY-homologous receiver domain CFSAN000658_RS15445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS15445 SM00387 Histidine kinase-like ATPases CFSAN000658_RS15445 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS15445 SM00448 cheY-homologous receiver domain CFSAN000658_RS15500 SM00028 Tetratricopeptide repeats CFSAN000658_RS15560 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS15635 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS15655 SM00479 CFSAN000658_RS15655 CFSAN000658_RS15705 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS15730 SM00363 S4 RNA-binding domain CFSAN000658_RS15750 SM00478 endonuclease III CFSAN000658_RS15750 SM00525 CFSAN000658_RS15750 CFSAN000658_RS15760 SM00900 CFSAN000658_RS15760 CFSAN000658_RS15820 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS15850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS15850 SM00387 Histidine kinase-like ATPases CFSAN000658_RS15850 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS15870 SM00448 cheY-homologous receiver domain CFSAN000658_RS15870 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS15890 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CFSAN000658_RS15890 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CFSAN000658_RS15950 SM00116 Domain in cystathionine beta-synthase and other proteins. CFSAN000658_RS15950 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS15985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS15990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS16020 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS16045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS16045 SM00895 CFSAN000658_RS16045 CFSAN000658_RS16095 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS16100 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS16200 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS16200 SM00895 CFSAN000658_RS16200 CFSAN000658_RS16230 SM00347 helix_turn_helix multiple antibiotic resistance protein CFSAN000658_RS16310 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS16325 SM00642 Alpha-amylase domain CFSAN000658_RS16330 SM00642 Alpha-amylase domain CFSAN000658_RS16335 SM00642 Alpha-amylase domain CFSAN000658_RS16375 SM00919 Malic enzyme, NAD binding domain CFSAN000658_RS16375 SM01274 CFSAN000658_RS16375 CFSAN000658_RS16380 SM00829 Enoylreductase CFSAN000658_RS16400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS16435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS16490 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS16490 SM00895 CFSAN000658_RS16490 CFSAN000658_RS16495 SM00829 Enoylreductase CFSAN000658_RS16540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS16575 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS16640 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS16640 SM01134 CFSAN000658_RS16640 CFSAN000658_RS16655 SM00867 YceI-like domain CFSAN000658_RS16670 SM01150 CFSAN000658_RS16670 CFSAN000658_RS16680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS16680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS16680 SM00319 Homologues of the ligand binding domain of Tar CFSAN000658_RS16685 SM00829 Enoylreductase CFSAN000658_RS16710 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS16720 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS16750 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS16750 SM00487 DEAD-like helicases superfamily CFSAN000658_RS16750 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS16750 SM00847 Helicase associated domain (HA2) Add an annotation CFSAN000658_RS16800 SM00890 Domain of unknown function CFSAN000658_RS16840 SM00487 DEAD-like helicases superfamily CFSAN000658_RS16840 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS16850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS16855 SM00463 Small MutS-related domain CFSAN000658_RS16865 SM00100 Cyclic nucleotide-monophosphate binding domain CFSAN000658_RS16865 SM00419 helix_turn_helix, cAMP Regulatory protein CFSAN000658_RS16885 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS16890 SM00873 B3/4 domain CFSAN000658_RS16920 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS16920 SM00871 Bacterial transcription activator, effector binding domain CFSAN000658_RS16940 SM00822 CFSAN000658_RS16940 CFSAN000658_RS16970 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS16980 SM00091 PAS domain CFSAN000658_RS16980 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS16995 SM00450 Rhodanese Homology Domain CFSAN000658_RS17020 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS17070 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS17075 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS17110 SM00357 Cold shock protein domain CFSAN000658_RS17110 SM00955 CFSAN000658_RS17110 CFSAN000658_RS17115 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS17115 SM00091 PAS domain CFSAN000658_RS17115 SM00267 diguanylate cyclase CFSAN000658_RS17125 SM00420 helix_turn_helix, Deoxyribose operon repressor CFSAN000658_RS17125 SM01134 CFSAN000658_RS17125 CFSAN000658_RS17140 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFSAN000658_RS17145 SM00028 Tetratricopeptide repeats CFSAN000658_RS17155 SM00014 Acid phosphatase homologues CFSAN000658_RS17180 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFSAN000658_RS17180 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFSAN000658_RS17180 SM00493 CFSAN000658_RS17180 CFSAN000658_RS17195 SM00822 CFSAN000658_RS17195 CFSAN000658_RS17205 SM00363 S4 RNA-binding domain CFSAN000658_RS17215 SM00481 DNA polymerase alpha chain like domain CFSAN000658_RS17300 SM00155 Phospholipase D. Active site motifs. CFSAN000658_RS17315 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS17320 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS17355 SM00528 Domain in histone-like proteins of HNS family CFSAN000658_RS17365 SM00448 cheY-homologous receiver domain CFSAN000658_RS17415 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS17430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS17430 SM00387 Histidine kinase-like ATPases CFSAN000658_RS17435 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS17435 SM00448 cheY-homologous receiver domain CFSAN000658_RS17460 SM01321 CFSAN000658_RS17460 CFSAN000658_RS17485 SM00937 CFSAN000658_RS17485 CFSAN000658_RS17505 SM01400 CFSAN000658_RS17505 CFSAN000658_RS17585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFSAN000658_RS17615 SM01091 Transporter associated domain CFSAN000658_RS17620 SM01005 Alanine racemase, C-terminal domain CFSAN000658_RS17635 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS17695 SM00341 Helicase and RNase D C-terminal CFSAN000658_RS17695 SM00474 3'-5' exonuclease CFSAN000658_RS17715 SM00487 DEAD-like helicases superfamily CFSAN000658_RS17715 SM00491 CFSAN000658_RS17715 CFSAN000658_RS17745 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS17750 SM01091 Transporter associated domain CFSAN000658_RS17795 SM00357 Cold shock protein domain CFSAN000658_RS17820 SM00346 helix_turn_helix isocitrate lyase regulation CFSAN000658_RS17835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFSAN000658_RS17835 SM00245 tail specific protease CFSAN000658_RS17840 SM00945 ProQ/FINO family CFSAN000658_RS17845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFSAN000658_RS17950 SM00506 Appr-1"-p processing enzyme CFSAN000658_RS18035 SM00479 CFSAN000658_RS18035 CFSAN000658_RS18095 SM00257 Lysin motif CFSAN000658_RS18105 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS18115 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS18120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFSAN000658_RS18190 SM00836 DALR anticodon binding domain CFSAN000658_RS18190 SM01016 Arginyl tRNA synthetase N terminal dom CFSAN000658_RS18225 SM00448 cheY-homologous receiver domain CFSAN000658_RS18230 SM00448 cheY-homologous receiver domain CFSAN000658_RS18235 SM00138 Methyltransferase, chemotaxis proteins CFSAN000658_RS18240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CFSAN000658_RS18240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS18240 SM00319 Homologues of the ligand binding domain of Tar CFSAN000658_RS18245 SM00260 Two component signalling adaptor domain CFSAN000658_RS18250 SM00073 Histidine Phosphotransfer domain CFSAN000658_RS18250 SM00260 Two component signalling adaptor domain CFSAN000658_RS18250 SM00387 Histidine kinase-like ATPases CFSAN000658_RS18250 SM01231 CFSAN000658_RS18250 CFSAN000658_RS18370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFSAN000658_RS18370 SM00465 GIY-YIG type nucleases (URI domain) CFSAN000658_RS18375 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS18375 SM00448 cheY-homologous receiver domain CFSAN000658_RS18390 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS18395 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS18410 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS18410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFSAN000658_RS18450 SM00642 Alpha-amylase domain CFSAN000658_RS18495 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS18545 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS18565 SM00267 diguanylate cyclase CFSAN000658_RS18595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS18610 SM00357 Cold shock protein domain CFSAN000658_RS18715 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFSAN000658_RS18760 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS18840 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS18850 SM00877 CFSAN000658_RS18850 CFSAN000658_RS18855 SM00877 CFSAN000658_RS18855 CFSAN000658_RS18885 SM00877 CFSAN000658_RS18885 CFSAN000658_RS18890 SM00877 CFSAN000658_RS18890 CFSAN000658_RS18930 SM00877 CFSAN000658_RS18930 CFSAN000658_RS18935 SM00877 CFSAN000658_RS18935 CFSAN000658_RS18965 SM00871 Bacterial transcription activator, effector binding domain CFSAN000658_RS18970 SM00936 Penicillin-binding protein 5, C-terminal domain CFSAN000658_RS18985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS18995 SM00479 CFSAN000658_RS18995 CFSAN000658_RS19060 SM00984 UDP binding domain CFSAN000658_RS19065 SM01350 CFSAN000658_RS19065 CFSAN000658_RS19220 SM00226 Low molecular weight phosphatase family CFSAN000658_RS19230 SM01091 Transporter associated domain CFSAN000658_RS19250 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS19250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CFSAN000658_RS19250 SM00091 PAS domain CFSAN000658_RS19250 SM00267 diguanylate cyclase CFSAN000658_RS19255 SM00478 endonuclease III CFSAN000658_RS19255 SM01009 AlkA N-terminal domain CFSAN000658_RS19285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS19285 SM00387 Histidine kinase-like ATPases CFSAN000658_RS19285 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS19290 SM00448 cheY-homologous receiver domain CFSAN000658_RS19290 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS19330 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFSAN000658_RS19335 SM01133 CFSAN000658_RS19335 CFSAN000658_RS19355 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS19355 SM00866 CFSAN000658_RS19355 CFSAN000658_RS19425 SM00448 cheY-homologous receiver domain CFSAN000658_RS19425 SM00850 LytTr DNA-binding domain CFSAN000658_RS19430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFSAN000658_RS19430 SM00387 Histidine kinase-like ATPases CFSAN000658_RS19435 SM00422 helix_turn_helix, mercury resistance CFSAN000658_RS19450 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS19465 SM01217 CFSAN000658_RS19465 CFSAN000658_RS19575 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS19585 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS19605 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS19645 SM00518 AP endonuclease family 2 CFSAN000658_RS19680 SM00841 Elongation factor P, C-terminal CFSAN000658_RS19680 SM01185 CFSAN000658_RS19680 CFSAN000658_RS19690 SM00014 Acid phosphatase homologues CFSAN000658_RS19700 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS19720 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS19740 SM00363 S4 RNA-binding domain CFSAN000658_RS19745 SM00487 DEAD-like helicases superfamily CFSAN000658_RS19745 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS19790 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS19790 SM00448 cheY-homologous receiver domain CFSAN000658_RS19830 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS19855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS19875 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS19885 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS19900 SM00387 Histidine kinase-like ATPases CFSAN000658_RS19905 SM00421 helix_turn_helix, Lux Regulon CFSAN000658_RS19905 SM00448 cheY-homologous receiver domain CFSAN000658_RS19910 SM00387 Histidine kinase-like ATPases CFSAN000658_RS19910 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS19910 SM00448 cheY-homologous receiver domain CFSAN000658_RS19915 SM00434 DNA Topoisomerase IV CFSAN000658_RS19920 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS19930 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS19930 SM00895 CFSAN000658_RS19930 CFSAN000658_RS20000 SM00852 Probable molybdopterin binding domain CFSAN000658_RS20065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFSAN000658_RS20105 SM00260 Two component signalling adaptor domain CFSAN000658_RS20105 SM00448 cheY-homologous receiver domain CFSAN000658_RS20145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS20145 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFSAN000658_RS20150 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFSAN000658_RS20195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFSAN000658_RS20235 SM00861 Transketolase, pyrimidine binding domain CFSAN000658_RS20265 SM00354 helix_turn _helix lactose operon repressor CFSAN000658_RS20295 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS20310 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS20315 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS20345 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS20385 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFSAN000658_RS20410 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS20430 SM00825 Beta-ketoacyl synthase CFSAN000658_RS20470 SM00463 Small MutS-related domain CFSAN000658_RS20520 SM00448 cheY-homologous receiver domain CFSAN000658_RS20525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS20525 SM00387 Histidine kinase-like ATPases CFSAN000658_RS20525 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS20625 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS20625 SM00267 diguanylate cyclase CFSAN000658_RS20715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFSAN000658_RS20715 SM00292 breast cancer carboxy-terminal domain CFSAN000658_RS20715 SM00532 Ligase N family CFSAN000658_RS20720 SM00771 ZipA, C-terminal domain (FtsZ-binding) CFSAN000658_RS20765 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFSAN000658_RS20785 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS20805 SM00822 CFSAN000658_RS20805 CFSAN000658_RS20830 SM00646 CFSAN000658_RS20830 CFSAN000658_RS20840 SM00342 helix_turn_helix, arabinose operon control protein CFSAN000658_RS20845 SM00877 CFSAN000658_RS20845 CFSAN000658_RS20850 SM00877 CFSAN000658_RS20850 CFSAN000658_RS20895 SM00877 CFSAN000658_RS20895 CFSAN000658_RS20920 SM00877 CFSAN000658_RS20920 CFSAN000658_RS20925 SM00919 Malic enzyme, NAD binding domain CFSAN000658_RS20925 SM01274 CFSAN000658_RS20925 CFSAN000658_RS20935 SM00861 Transketolase, pyrimidine binding domain CFSAN000658_RS20965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFSAN000658_RS20965 SM00387 Histidine kinase-like ATPases CFSAN000658_RS21010 SM01130 CFSAN000658_RS21010 CFSAN000658_RS21090 SM00052 Putative diguanylate phosphodiesterase CFSAN000658_RS21090 SM00267 diguanylate cyclase CFSAN000658_RS21165 SM00116 Domain in cystathionine beta-synthase and other proteins. CFSAN000658_RS21165 SM01240 CFSAN000658_RS21165 CFSAN000658_RS21175 SM00869 Autotransporter beta-domain CFSAN000658_RS21210 SM00564 beta-propeller repeat CFSAN000658_RS21230 SM00530 Helix-turn-helix XRE-family like proteins CFSAN000658_RS21240 SM00562 CFSAN000658_RS21240 CFSAN000658_RS21260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFSAN000658_RS21270 SM01359 CFSAN000658_RS21270 CFSAN000658_RS21270 SM01360 CFSAN000658_RS21270 CFSAN000658_RS21275 SM00450 Rhodanese Homology Domain CFSAN000658_RS21305 SM00271 DnaJ molecular chaperone homology domain CFSAN000658_RS21390 SM00862 Transcriptional regulatory protein, C terminal CFSAN000658_RS21410 SM00938 Nitrogen regulatory protein P-II CFSAN000658_RS21415 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS21415 SM00448 cheY-homologous receiver domain CFSAN000658_RS21425 SM00387 Histidine kinase-like ATPases CFSAN000658_RS21425 SM00388 His Kinase A (phosphoacceptor) domain CFSAN000658_RS21430 SM01211 CFSAN000658_RS21430 CFSAN000658_RS21440 SM00062 Bacterial periplasmic substrate-binding proteins CFSAN000658_RS21510 SM00358 Double-stranded RNA binding motif CFSAN000658_RS21510 SM00535 Ribonuclease III family CFSAN000658_RS21555 SM00487 DEAD-like helicases superfamily CFSAN000658_RS21555 SM00490 helicase superfamily c-terminal domain CFSAN000658_RS21575 SM00986 Uracil DNA glycosylase superfamily CFSAN000658_RS21575 SM00987 UreE urease accessory protein, C-terminal domain CFSAN000658_RS21580 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFSAN000658_RS21590 SM01144 CFSAN000658_RS21590 CFSAN000658_RS21595 SM00881 CoA binding domain CFSAN000658_RS21600 SM00155 Phospholipase D. Active site motifs. CFSAN000658_RS21650 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS21650 SM01086 C-terminal, D2-small domain, of ClpB protein CFSAN000658_RS21660 SM00363 S4 RNA-binding domain CFSAN000658_RS21675 SM00830 Chorismate mutase type II CFSAN000658_RS21685 SM00830 Chorismate mutase type II CFSAN000658_RS21700 SM00267 diguanylate cyclase CFSAN000658_RS21725 SM00382 ATPases associated with a variety of cellular activities CFSAN000658_RS21725 SM00962 SRP54-type protein, GTPase domain CFSAN000658_RS21725 SM00963 SRP54-type protein, helical bundle domain CFSAN000658_RS21735 SM01091 Transporter associated domain CFSAN000658_RS21790 SM00382 ATPases associated with a variety of cellular activities