locus-tag class description CYD39_RS00005 PF08254 Threonine leader peptide CYD39_RS00010 PF03447 Homoserine dehydrogenase, NAD binding domain CYD39_RS00010 PF00696 Amino acid kinase family CYD39_RS00010 PF00742 Homoserine dehydrogenase CYD39_RS00010 PF01842 ACT domain CYD39_RS00010 PF13840 ACT domain CYD39_RS00015 PF00288 GHMP kinases N terminal domain CYD39_RS00015 PF08544 GHMP kinases C terminal CYD39_RS00020 PF14821 Threonine synthase N terminus CYD39_RS00020 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS00025 PF03883 Peroxide stress protein YaaA CYD39_RS00030 PF01235 Sodium:alanine symporter family CYD39_RS00035 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYD39_RS00040 PF00994 Probable molybdopterin binding domain CYD39_RS00045 PF01184 GPR1/FUN34/yaaH family CYD39_RS00050 PF03981 Ubiquinol-cytochrome C chaperone CYD39_RS00050 PF13099 Domain of unknown function (DUF3944) CYD39_RS00055 PF10807 Protein of unknown function (DUF2541) CYD39_RS00060 PF00012 Hsp70 protein CYD39_RS00065 PF01556 DnaJ C terminal domain CYD39_RS00065 PF00226 DnaJ domain CYD39_RS00065 PF00684 DnaJ central domain CYD39_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS00070 PF03466 LysR substrate binding domain CYD39_RS00090 PF00704 Glycosyl hydrolases family 18 CYD39_RS00105 PF00419 Fimbrial protein CYD39_RS00110 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS00110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS00115 PF13953 PapC C-terminal domain CYD39_RS00115 PF13954 PapC N-terminal domain CYD39_RS00115 PF00577 Outer membrane usher protein CYD39_RS00120 PF00419 Fimbrial protein CYD39_RS00125 PF00419 Fimbrial protein CYD39_RS00130 PF16970 Type-1 fimbrial protein, A CYD39_RS00135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS00135 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS00155 PF03466 LysR substrate binding domain CYD39_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS00170 PF02872 5'-nucleotidase, C-terminal domain CYD39_RS00170 PF00149 Calcineurin-like phosphoesterase CYD39_RS00180 PF00884 Sulfatase CYD39_RS00180 PF16385 Domain of unknown function CYD39_RS00185 PF13186 Iron-sulfur cluster-binding domain CYD39_RS00185 PF04055 Radical SAM superfamily CYD39_RS00200 PF06965 Na+/H+ antiporter 1 CYD39_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS00205 PF03466 LysR substrate binding domain CYD39_RS00210 PF01055 Glycosyl hydrolases family 31 CYD39_RS00220 PF01649 Ribosomal protein S20 CYD39_RS00225 PF10837 Protein of unknown function (DUF2575) CYD39_RS00230 PF06574 FAD synthetase CYD39_RS00230 PF01687 Riboflavin kinase CYD39_RS00235 PF06827 Zinc finger found in FPG and IleRS CYD39_RS00235 PF00133 tRNA synthetases class I (I, L, M and V) CYD39_RS00235 PF08264 Anticodon-binding domain of tRNA CYD39_RS00240 PF01252 Signal peptidase (SPase) II CYD39_RS00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYD39_RS00250 PF02401 LytB protein CYD39_RS00260 PF01156 Inosine-uridine preferring nucleoside hydrolase CYD39_RS00265 PF00072 Response regulator receiver domain CYD39_RS00265 PF12431 Transcriptional regulator CYD39_RS00270 PF17203 Single cache domain 3 CYD39_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS00275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CYD39_RS00280 PF02436 Conserved carboxylase domain CYD39_RS00280 PF00682 HMGL-like CYD39_RS00280 PF00364 Biotin-requiring enzyme CYD39_RS00285 PF04277 Oxaloacetate decarboxylase, gamma chain CYD39_RS00290 PF03390 2-hydroxycarboxylate transporter family CYD39_RS00295 PF08218 Citrate lyase ligase C-terminal domain CYD39_RS00295 PF00583 Acetyltransferase (GNAT) family CYD39_RS00300 PF06857 Malonate decarboxylase delta subunit (MdcD) CYD39_RS00305 PF03328 HpcH/HpaI aldolase/citrate lyase family CYD39_RS00310 PF04223 Citrate lyase, alpha subunit (CitF) CYD39_RS00315 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CYD39_RS00320 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CYD39_RS00325 PF01113 Dihydrodipicolinate reductase, N-terminus CYD39_RS00325 PF05173 Dihydrodipicolinate reductase, C-terminus CYD39_RS00340 PF00117 Glutamine amidotransferase class-I CYD39_RS00340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYD39_RS00345 PF02142 MGS-like domain CYD39_RS00345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYD39_RS00345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYD39_RS00350 PF07180 CaiF/GrlA transcriptional regulator CYD39_RS00355 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS00360 PF00378 Enoyl-CoA hydratase/isomerase CYD39_RS00365 PF00501 AMP-binding enzyme CYD39_RS00365 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS00370 PF02515 CoA-transferase family III CYD39_RS00375 PF02770 Acyl-CoA dehydrogenase, middle domain CYD39_RS00375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYD39_RS00375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYD39_RS00380 PF02028 BCCT, betaine/carnitine/choline family transporter CYD39_RS00385 PF01012 Electron transfer flavoprotein domain CYD39_RS00390 PF01012 Electron transfer flavoprotein domain CYD39_RS00390 PF00766 Electron transfer flavoprotein FAD-binding domain CYD39_RS00395 PF01494 FAD binding domain CYD39_RS00405 PF00083 Sugar (and other) transporter CYD39_RS00410 PF06004 Bacterial protein of unknown function (DUF903) CYD39_RS00425 PF00884 Sulfatase CYD39_RS00430 PF02525 Flavodoxin-like fold CYD39_RS00435 PF00999 Sodium/hydrogen exchanger family CYD39_RS00435 PF02254 TrkA-N domain CYD39_RS00440 PF00186 Dihydrofolate reductase CYD39_RS00445 PF00149 Calcineurin-like phosphoesterase CYD39_RS00450 PF04379 ApaG domain CYD39_RS00455 PF00398 Ribosomal RNA adenine dimethylase CYD39_RS00460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYD39_RS00465 PF09312 SurA N-terminal domain CYD39_RS00465 PF00639 PPIC-type PPIASE domain CYD39_RS00470 PF03968 OstA-like protein CYD39_RS00470 PF04453 LPS transport system D CYD39_RS00475 PF05099 Tellurite resistance protein TerB CYD39_RS00475 PF00226 DnaJ domain CYD39_RS00485 PF00849 RNA pseudouridylate synthase CYD39_RS00490 PF18337 RapA N-terminal Tudor like domain CYD39_RS00490 PF18339 RapA N-terminal Tudor like domain 1 CYD39_RS00490 PF00176 SNF2 family N-terminal domain CYD39_RS00490 PF12137 RNA polymerase recycling family C-terminal CYD39_RS00490 PF00271 Helicase conserved C-terminal domain CYD39_RS00495 PF03104 DNA polymerase family B, exonuclease domain CYD39_RS00495 PF00136 DNA polymerase family B CYD39_RS00510 PF01385 Probable transposase CYD39_RS00510 PF07282 Putative transposase DNA-binding domain CYD39_RS00510 PF12323 Helix-turn-helix domain CYD39_RS00530 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS00535 PF02610 L-arabinose isomerase CYD39_RS00535 PF11762 L-arabinose isomerase C-terminal domain CYD39_RS00540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS00545 PF12833 Helix-turn-helix domain CYD39_RS00545 PF02311 AraC-like ligand binding domain CYD39_RS00550 PF09335 SNARE associated Golgi protein CYD39_RS00555 PF00005 ABC transporter CYD39_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS00570 PF12793 Sugar transport-related sRNA regulator N-term CYD39_RS00570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS00580 PF00694 Aconitase C-terminal domain CYD39_RS00585 PF00330 Aconitase family (aconitate hydratase) CYD39_RS00590 PF00180 Isocitrate/isopropylmalate dehydrogenase CYD39_RS00595 PF08502 LeuA allosteric (dimerisation) domain CYD39_RS00595 PF00682 HMGL-like CYD39_RS00600 PF08054 Leucine operon leader peptide CYD39_RS00605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS00605 PF03466 LysR substrate binding domain CYD39_RS00610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS00610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS00610 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS00615 PF10369 Small subunit of acetolactate synthase CYD39_RS00620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYD39_RS00620 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS00625 PF02381 MraZ protein, putative antitoxin-like CYD39_RS00630 PF01795 MraW methylase family CYD39_RS00635 PF04999 Cell division protein FtsL CYD39_RS00640 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS00640 PF03717 Penicillin-binding Protein dimerisation domain CYD39_RS00645 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS00645 PF08245 Mur ligase middle domain CYD39_RS00645 PF01225 Mur ligase family, catalytic domain CYD39_RS00650 PF08245 Mur ligase middle domain CYD39_RS00650 PF01225 Mur ligase family, catalytic domain CYD39_RS00650 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS00655 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYD39_RS00655 PF00953 Glycosyl transferase family 4 CYD39_RS00660 PF08245 Mur ligase middle domain CYD39_RS00660 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS00665 PF01098 Cell cycle protein CYD39_RS00670 PF04101 Glycosyltransferase family 28 C-terminal domain CYD39_RS00670 PF03033 Glycosyltransferase family 28 N-terminal domain CYD39_RS00675 PF08245 Mur ligase middle domain CYD39_RS00675 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS00675 PF01225 Mur ligase family, catalytic domain CYD39_RS00680 PF07478 D-ala D-ala ligase C-terminus CYD39_RS00680 PF01820 D-ala D-ala ligase N-terminus CYD39_RS00685 PF03799 Cell division protein FtsQ CYD39_RS00685 PF08478 POTRA domain, FtsQ-type CYD39_RS00690 PF02491 SHS2 domain inserted in FTSA CYD39_RS00695 PF00091 Tubulin/FtsZ family, GTPase domain CYD39_RS00695 PF12327 FtsZ family, C-terminal domain CYD39_RS00700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYD39_RS00705 PF06558 Secretion monitor precursor protein (SecM) CYD39_RS00710 PF02810 SEC-C motif CYD39_RS00710 PF07517 SecA DEAD-like domain CYD39_RS00710 PF07516 SecA Wing and Scaffold domain CYD39_RS00710 PF01043 SecA preprotein cross-linking domain CYD39_RS00715 PF00293 NUDIX domain CYD39_RS00720 PF00248 Aldo/keto reductase family CYD39_RS00725 PF03466 LysR substrate binding domain CYD39_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS00730 PF03884 DNA gyrase inhibitor YacG CYD39_RS00735 PF07072 Cell division protein CYD39_RS00740 PF01121 Dephospho-CoA kinase CYD39_RS00745 PF00478 IMP dehydrogenase / GMP reductase domain CYD39_RS00750 PF00482 Type II secretion system (T2SS), protein F CYD39_RS00755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYD39_RS00755 PF00437 Type II/IV secretion system protein CYD39_RS00760 PF07963 Prokaryotic N-terminal methylation motif CYD39_RS00765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYD39_RS00765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYD39_RS00770 PF01510 N-acetylmuramoyl-L-alanine amidase CYD39_RS00775 PF17113 Regulatory signalling modulator protein AmpE CYD39_RS00780 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CYD39_RS00780 PF04616 Glycosyl hydrolases family 43 CYD39_RS00790 PF00324 Amino acid permease CYD39_RS00795 PF07729 FCD domain CYD39_RS00795 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS00800 PF17831 Pyruvate dehydrogenase E1 component middle domain CYD39_RS00800 PF00456 Transketolase, thiamine diphosphate binding domain CYD39_RS00805 PF00364 Biotin-requiring enzyme CYD39_RS00805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYD39_RS00805 PF02817 e3 binding domain CYD39_RS00810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD39_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS00825 PF11737 Protein of unknown function (DUF3300) CYD39_RS00830 PF11791 Aconitate B N-terminal domain CYD39_RS00830 PF06434 Aconitate hydratase 2 N-terminus CYD39_RS00830 PF00330 Aconitase family (aconitate hydratase) CYD39_RS00860 PF00330 Aconitase family (aconitate hydratase) CYD39_RS00860 PF06434 Aconitate hydratase 2 N-terminus CYD39_RS00860 PF11791 Aconitate B N-terminal domain CYD39_RS00875 PF06062 Uncharacterised protein family (UPF0231) CYD39_RS00880 PF03812 2-keto-3-deoxygluconate permease CYD39_RS00885 PF07005 Sugar-binding N-terminal domain CYD39_RS00885 PF17042 Nucleotide-binding C-terminal domain CYD39_RS00890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYD39_RS00895 PF00455 DeoR C terminal sensor domain CYD39_RS00895 PF08220 DeoR-like helix-turn-helix domain CYD39_RS00900 PF02675 S-adenosylmethionine decarboxylase CYD39_RS00905 PF17284 Spermidine synthase tetramerisation domain CYD39_RS00910 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CYD39_RS00915 PF07732 Multicopper oxidase CYD39_RS00915 PF07731 Multicopper oxidase CYD39_RS00915 PF00394 Multicopper oxidase CYD39_RS00920 PF01011 PQQ enzyme repeat CYD39_RS00925 PF00156 Phosphoribosyl transferase domain CYD39_RS00930 PF00484 Carbonic anhydrase CYD39_RS00935 PF00005 ABC transporter CYD39_RS00940 PF01061 ABC-2 type transporter CYD39_RS00945 PF00419 Fimbrial protein CYD39_RS00950 PF13953 PapC C-terminal domain CYD39_RS00950 PF13954 PapC N-terminal domain CYD39_RS00950 PF00577 Outer membrane usher protein CYD39_RS00955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS00955 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS00965 PF03610 PTS system fructose IIA component CYD39_RS00970 PF01522 Polysaccharide deacetylase CYD39_RS00975 PF02261 Aspartate decarboxylase CYD39_RS00980 PF02569 Pantoate-beta-alanine ligase CYD39_RS00985 PF02548 Ketopantoate hydroxymethyltransferase CYD39_RS00990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYD39_RS00995 PF12626 Polymerase A arginine-rich C-terminus CYD39_RS00995 PF12627 Probable RNA and SrmB- binding site of polymerase A CYD39_RS00995 PF01743 Poly A polymerase head domain CYD39_RS01000 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYD39_RS01005 PF01258 Prokaryotic dksA/traR C4-type zinc finger CYD39_RS01010 PF17746 SfsA N-terminal OB domain CYD39_RS01010 PF03749 Sugar fermentation stimulation protein RE domain CYD39_RS01015 PF02834 LigT like Phosphoesterase CYD39_RS01020 PF08482 ATP-dependent helicase C-terminal CYD39_RS01020 PF00270 DEAD/DEAH box helicase CYD39_RS01020 PF04408 Helicase associated domain (HA2) CYD39_RS01020 PF00271 Helicase conserved C-terminal domain CYD39_RS01025 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CYD39_RS01025 PF00912 Transglycosylase CYD39_RS01025 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS01025 PF14814 Bifunctional transglycosylase second domain CYD39_RS01030 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS01030 PF00593 TonB dependent receptor CYD39_RS01035 PF00005 ABC transporter CYD39_RS01040 PF01497 Periplasmic binding protein CYD39_RS01045 PF01032 FecCD transport family CYD39_RS01060 PF13953 PapC C-terminal domain CYD39_RS01060 PF13954 PapC N-terminal domain CYD39_RS01060 PF00577 Outer membrane usher protein CYD39_RS01065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS01065 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS01070 PF00419 Fimbrial protein CYD39_RS01075 PF00419 Fimbrial protein CYD39_RS01080 PF00419 Fimbrial protein CYD39_RS01085 PF11245 Protein of unknown function (DUF2544) CYD39_RS01090 PF00202 Aminotransferase class-III CYD39_RS01095 PF00654 Voltage gated chloride channel CYD39_RS01100 PF01521 Iron-sulphur cluster biosynthesis CYD39_RS01110 PF03458 UPF0126 domain CYD39_RS01115 PF01497 Periplasmic binding protein CYD39_RS01120 PF01048 Phosphorylase superfamily CYD39_RS01125 PF01966 HD domain CYD39_RS01125 PF13286 Phosphohydrolase-associated domain CYD39_RS01130 PF00595 PDZ domain CYD39_RS01135 PF13556 PucR C-terminal helix-turn-helix domain CYD39_RS01135 PF17853 GGDEF-like domain CYD39_RS01135 PF05651 Putative sugar diacid recognition CYD39_RS01140 PF11944 Protein of unknown function (DUF3461) CYD39_RS01145 PF07690 Major Facilitator Superfamily CYD39_RS01145 PF00083 Sugar (and other) transporter CYD39_RS01150 PF14602 Hexapeptide repeat of succinyl-transferase CYD39_RS01150 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS01150 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CYD39_RS01155 PF01966 HD domain CYD39_RS01155 PF01842 ACT domain CYD39_RS01155 PF01909 Nucleotidyltransferase domain CYD39_RS01155 PF08335 GlnD PII-uridylyltransferase CYD39_RS01160 PF00557 Metallopeptidase family M24 CYD39_RS01165 PF00318 Ribosomal protein S2 CYD39_RS01170 PF00889 Elongation factor TS CYD39_RS01175 PF00696 Amino acid kinase family CYD39_RS01180 PF01765 Ribosome recycling factor CYD39_RS01185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CYD39_RS01185 PF13288 DXP reductoisomerase C-terminal domain CYD39_RS01185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYD39_RS01190 PF01255 Putative undecaprenyl diphosphate synthase CYD39_RS01200 PF17820 PDZ domain CYD39_RS01200 PF02163 Peptidase family M50 CYD39_RS01205 PF01103 Surface antigen CYD39_RS01205 PF07244 Surface antigen variable number repeat CYD39_RS01210 PF03938 Outer membrane protein (OmpH-like) CYD39_RS01215 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS01215 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYD39_RS01220 PF07977 FabA-like domain CYD39_RS01225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYD39_RS01225 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS01230 PF02684 Lipid-A-disaccharide synthetase CYD39_RS01235 PF01351 Ribonuclease HII CYD39_RS01240 PF01336 OB-fold nucleic acid binding domain CYD39_RS01240 PF02811 PHP domain CYD39_RS01240 PF14579 Helix-hairpin-helix motif CYD39_RS01240 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYD39_RS01240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYD39_RS01245 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYD39_RS01250 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CYD39_RS01250 PF18416 N-acetylglucosamine binding protein domain 2 CYD39_RS01255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYD39_RS01255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS01255 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS01260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYD39_RS01265 PF11734 TilS substrate C-terminal domain CYD39_RS01265 PF09179 TilS substrate binding domain CYD39_RS01265 PF01171 PP-loop family CYD39_RS01270 PF07073 Modulator of Rho-dependent transcription termination (ROF) CYD39_RS01275 PF06786 Uncharacterised protein family (UPF0253) CYD39_RS01280 PF07152 YaeQ protein CYD39_RS01285 PF00472 RF-1 domain CYD39_RS01290 PF04170 NlpE N-terminal domain CYD39_RS01290 PF17185 NlpE C-terminal OB domain CYD39_RS01295 PF04073 Aminoacyl-tRNA editing domain CYD39_RS01295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYD39_RS01295 PF03129 Anticodon binding domain CYD39_RS01300 PF01980 tRNA-methyltransferase O CYD39_RS01300 PF18389 TrmO C-terminal domain CYD39_RS01305 PF16358 RcsF lipoprotein CYD39_RS01310 PF03180 NLPA lipoprotein CYD39_RS01315 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS01320 PF00005 ABC transporter CYD39_RS01320 PF09383 NIL domain CYD39_RS01360 PF00248 Aldo/keto reductase family CYD39_RS01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS01365 PF03466 LysR substrate binding domain CYD39_RS01370 PF07690 Major Facilitator Superfamily CYD39_RS01375 PF03372 Endonuclease/Exonuclease/phosphatase family CYD39_RS01380 PF08241 Methyltransferase domain CYD39_RS01385 PF01476 LysM domain CYD39_RS01385 PF01464 Transglycosylase SLT domain CYD39_RS01390 PF16123 Hydroxyacylglutathione hydrolase C-terminus CYD39_RS01390 PF00753 Metallo-beta-lactamase superfamily CYD39_RS01395 PF08241 Methyltransferase domain CYD39_RS01400 PF00075 RNase H CYD39_RS01405 PF00929 Exonuclease CYD39_RS01415 PF00589 Phage integrase family CYD39_RS01415 PF13356 Arm DNA-binding domain CYD39_RS01445 PF03050 Transposase IS66 family CYD39_RS01445 PF13007 Transposase C of IS166 homeodomain CYD39_RS01445 PF13005 zinc-finger binding domain of transposase IS66 CYD39_RS01445 PF13817 IS66 C-terminal element CYD39_RS01470 PF15606 Bacterial toxin 34 CYD39_RS01470 PF03527 RHS protein CYD39_RS01470 PF05593 RHS Repeat CYD39_RS01515 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS01515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS01520 PF13954 PapC N-terminal domain CYD39_RS01520 PF13953 PapC C-terminal domain CYD39_RS01520 PF00577 Outer membrane usher protein CYD39_RS01540 PF03466 LysR substrate binding domain CYD39_RS01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS01550 PF13505 Outer membrane protein beta-barrel domain CYD39_RS01565 PF00795 Carbon-nitrogen hydrolase CYD39_RS01570 PF09317 Domain of unknown function (DUF1974) CYD39_RS01570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYD39_RS01570 PF02770 Acyl-CoA dehydrogenase, middle domain CYD39_RS01570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYD39_RS01575 PF13580 SIS domain CYD39_RS01580 PF13230 Glutamine amidotransferases class-II CYD39_RS01585 PF03734 L,D-transpeptidase catalytic domain CYD39_RS01590 PF00817 impB/mucB/samB family CYD39_RS01590 PF11799 impB/mucB/samB family C-terminal domain CYD39_RS01590 PF11798 IMS family HHH motif CYD39_RS01600 PF00472 RF-1 domain CYD39_RS01605 PF01546 Peptidase family M20/M25/M40 CYD39_RS01605 PF07687 Peptidase dimerisation domain CYD39_RS01610 PF00156 Phosphoribosyl transferase domain CYD39_RS01615 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CYD39_RS01620 PF07417 Sigma factor-binding transcriptional regulator Crl CYD39_RS01625 PF00267 Gram-negative porin CYD39_RS01630 PF01472 PUA domain CYD39_RS01630 PF00696 Amino acid kinase family CYD39_RS01635 PF00171 Aldehyde dehydrogenase family CYD39_RS01645 PF00589 Phage integrase family CYD39_RS01645 PF13356 Arm DNA-binding domain CYD39_RS01660 PF08986 Domain of unknown function (DUF1889) CYD39_RS01665 PF07690 Major Facilitator Superfamily CYD39_RS01670 PF00330 Aconitase family (aconitate hydratase) CYD39_RS01675 PF00694 Aconitase C-terminal domain CYD39_RS01680 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYD39_RS01685 PF00561 alpha/beta hydrolase fold CYD39_RS01690 PF03466 LysR substrate binding domain CYD39_RS01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS01705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS01705 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS01715 PF13953 PapC C-terminal domain CYD39_RS01715 PF00577 Outer membrane usher protein CYD39_RS01715 PF13954 PapC N-terminal domain CYD39_RS01720 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS01720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS01725 PF16970 Type-1 fimbrial protein, A CYD39_RS01740 PF12792 CSS motif domain associated with EAL CYD39_RS01740 PF00563 EAL domain CYD39_RS01755 PF13505 Outer membrane protein beta-barrel domain CYD39_RS01775 PF02321 Outer membrane efflux protein CYD39_RS01780 PF00873 AcrB/AcrD/AcrF family CYD39_RS01785 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS01785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS01790 PF00403 Heavy-metal-associated domain CYD39_RS01795 PF00376 MerR family regulatory protein CYD39_RS01795 PF09278 MerR, DNA binding CYD39_RS01805 PF07690 Major Facilitator Superfamily CYD39_RS01810 PF01555 DNA methylase CYD39_RS01810 PF18273 Type III R-M EcoP15I C-terminal domain CYD39_RS01815 PF08774 VRR-NUC domain CYD39_RS01815 PF04851 Type III restriction enzyme, res subunit CYD39_RS01825 PF01654 Cytochrome bd terminal oxidase subunit I CYD39_RS01830 PF02322 Cytochrome bd terminal oxidase subunit II CYD39_RS01845 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS01845 PF00593 TonB dependent receptor CYD39_RS01850 PF01810 LysE type translocator CYD39_RS01855 PF07338 Protein of unknown function (DUF1471) CYD39_RS01860 PF00158 Sigma-54 interaction domain CYD39_RS01860 PF06506 Propionate catabolism activator CYD39_RS01860 PF02954 Bacterial regulatory protein, Fis family CYD39_RS01870 PF00285 Citrate synthase, C-terminal domain CYD39_RS01875 PF03972 MmgE/PrpD family CYD39_RS01880 PF00501 AMP-binding enzyme CYD39_RS01880 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS01880 PF16177 Acetyl-coenzyme A synthetase N-terminus CYD39_RS01885 PF00490 Delta-aminolevulinic acid dehydratase CYD39_RS01890 PF03797 Autotransporter beta-domain CYD39_RS01895 PF15977 Winged helix-turn-helix DNA binding CYD39_RS01900 PF00144 Beta-lactamase CYD39_RS01905 PF05992 SbmA/BacA-like family CYD39_RS01910 PF07759 Protein of unknown function (DUF1615) CYD39_RS01915 PF10954 Protein of unknown function (DUF2755) CYD39_RS01920 PF10953 Protein of unknown function (DUF2754) CYD39_RS01925 PF07478 D-ala D-ala ligase C-terminus CYD39_RS01925 PF01820 D-ala D-ala ligase N-terminus CYD39_RS01935 PF07690 Major Facilitator Superfamily CYD39_RS01940 PF10796 Sigma-S stabilisation anti-adaptor protein CYD39_RS01945 PF07769 psiF repeat CYD39_RS01950 PF05230 MASE2 domain CYD39_RS01950 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS01955 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYD39_RS01955 PF03807 NADP oxidoreductase coenzyme F420-dependent CYD39_RS01960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CYD39_RS01965 PF01202 Shikimate kinase CYD39_RS01970 PF16362 YaiA protein CYD39_RS01975 PF07302 AroM protein CYD39_RS01980 PF06865 Pyrimidine/purine nucleoside phosphorylase CYD39_RS01985 PF04381 Putative exonuclease, RdgC CYD39_RS01990 PF00480 ROK family CYD39_RS01995 PF07690 Major Facilitator Superfamily CYD39_RS02000 PF13476 AAA domain CYD39_RS02005 PF00149 Calcineurin-like phosphoesterase CYD39_RS02005 PF12320 Type 5 capsule protein repressor C-terminal domain CYD39_RS02010 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS02010 PF00072 Response regulator receiver domain CYD39_RS02015 PF00989 PAS fold CYD39_RS02015 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS02015 PF11808 Phosphate regulon sensor protein PhoR CYD39_RS02020 PF05525 Branched-chain amino acid transport protein CYD39_RS02025 PF00324 Amino acid permease CYD39_RS02030 PF02903 Alpha amylase, N-terminal ig-like domain CYD39_RS02030 PF00128 Alpha amylase, catalytic domain CYD39_RS02035 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYD39_RS02035 PF00578 AhpC/TSA family CYD39_RS02040 PF04336 Acyl carrier protein phosphodiesterase CYD39_RS02045 PF02547 Queuosine biosynthesis protein CYD39_RS02050 PF01702 Queuine tRNA-ribosyltransferase CYD39_RS02055 PF02699 Preprotein translocase subunit CYD39_RS02060 PF02355 Protein export membrane protein CYD39_RS02060 PF13721 SecD export protein N-terminal TM region CYD39_RS02060 PF07549 SecD/SecF GG Motif CYD39_RS02065 PF07549 SecD/SecF GG Motif CYD39_RS02065 PF02355 Protein export membrane protein CYD39_RS02070 PF01844 HNH endonuclease CYD39_RS02085 PF03502 Nucleoside-specific channel-forming protein, Tsx CYD39_RS02090 PF11622 Protein of unknown function (DUF3251) CYD39_RS02095 PF03477 ATP cone domain CYD39_RS02100 PF01872 RibD C-terminal domain CYD39_RS02100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYD39_RS02105 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYD39_RS02110 PF01029 NusB family CYD39_RS02115 PF02769 AIR synthase related protein, C-terminal domain CYD39_RS02115 PF00586 AIR synthase related protein, N-terminal domain CYD39_RS02120 PF04608 Phosphatidylglycerophosphatase A CYD39_RS02125 PF00248 Aldo/keto reductase family CYD39_RS02130 PF02779 Transketolase, pyrimidine binding domain CYD39_RS02130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYD39_RS02130 PF02780 Transketolase, C-terminal domain CYD39_RS02135 PF00348 Polyprenyl synthetase CYD39_RS02140 PF02609 Exonuclease VII small subunit CYD39_RS02145 PF02568 Thiamine biosynthesis protein (ThiI) CYD39_RS02145 PF02926 THUMP domain CYD39_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS02155 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS02160 PF00005 ABC transporter CYD39_RS02160 PF08402 TOBE domain CYD39_RS02165 PF01547 Bacterial extracellular solute-binding protein CYD39_RS02170 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS02170 PF07702 UTRA domain CYD39_RS02175 PF00266 Aminotransferase class-V CYD39_RS02185 PF01965 DJ-1/PfpI family CYD39_RS02190 PF02558 Ketopantoate reductase PanE/ApbA CYD39_RS02190 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYD39_RS02195 PF04461 Protein of unknown function (DUF520) CYD39_RS02200 PF07690 Major Facilitator Superfamily CYD39_RS02215 PF01040 UbiA prenyltransferase family CYD39_RS02220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CYD39_RS02225 PF00510 Cytochrome c oxidase subunit III CYD39_RS02230 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYD39_RS02235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYD39_RS02235 PF06481 COX Aromatic Rich Motif CYD39_RS02240 PF07690 Major Facilitator Superfamily CYD39_RS02245 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CYD39_RS02245 PF03923 Uncharacterized lipoprotein CYD39_RS02250 PF01722 BolA-like protein CYD39_RS02260 PF05698 Bacterial trigger factor protein (TF) C-terminus CYD39_RS02260 PF05697 Bacterial trigger factor protein (TF) CYD39_RS02260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYD39_RS02265 PF00574 Clp protease CYD39_RS02270 PF06689 ClpX C4-type zinc finger CYD39_RS02270 PF10431 C-terminal, D2-small domain, of ClpB protein CYD39_RS02270 PF07724 AAA domain (Cdc48 subfamily) CYD39_RS02275 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYD39_RS02275 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS02275 PF05362 Lon protease (S16) C-terminal proteolytic domain CYD39_RS02280 PF00216 Bacterial DNA-binding protein CYD39_RS02285 PF13145 PPIC-type PPIASE domain CYD39_RS02300 PF06508 Queuosine biosynthesis protein QueC CYD39_RS02305 PF12793 Sugar transport-related sRNA regulator N-term CYD39_RS02305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS02320 PF01037 Lrp/AsnC ligand binding domain CYD39_RS02320 PF13404 AsnC-type helix-turn-helix domain CYD39_RS02325 PF00664 ABC transporter transmembrane region CYD39_RS02325 PF00005 ABC transporter CYD39_RS02330 PF00664 ABC transporter transmembrane region CYD39_RS02330 PF00005 ABC transporter CYD39_RS02335 PF00543 Nitrogen regulatory protein P-II CYD39_RS02340 PF00909 Ammonium Transporter Family CYD39_RS02350 PF09619 Type III secretion system lipoprotein chaperone (YscW) CYD39_RS02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYD39_RS02365 PF00563 EAL domain CYD39_RS02365 PF12792 CSS motif domain associated with EAL CYD39_RS02370 PF01197 Ribosomal protein L31 CYD39_RS02375 PF00444 Ribosomal protein L36 CYD39_RS02380 PF10777 Inner membrane protein YlaC CYD39_RS02385 PF14602 Hexapeptide repeat of succinyl-transferase CYD39_RS02385 PF12464 Maltose acetyltransferase CYD39_RS02390 PF05321 Haemolysin expression modulating protein CYD39_RS02395 PF10757 Biofilm formation regulator YbaJ CYD39_RS02400 PF00873 AcrB/AcrD/AcrF family CYD39_RS02405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS02405 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS02410 PF08361 MAATS-type transcriptional repressor, C-terminal region CYD39_RS02410 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS02415 PF12795 Mechanosensitive ion channel porin domain CYD39_RS02415 PF12794 Mechanosensitive ion channel inner membrane domain 1 CYD39_RS02415 PF00924 Mechanosensitive ion channel CYD39_RS02420 PF04754 Putative transposase, YhgA-like CYD39_RS02425 PF10689 Protein of unknown function (DUF2496) CYD39_RS02430 PF07445 Primosomal replication protein priC CYD39_RS02435 PF04304 Protein of unknown function (DUF454) CYD39_RS02440 PF00156 Phosphoribosyl transferase domain CYD39_RS02445 PF12169 DNA polymerase III subunits gamma and tau domain III CYD39_RS02445 PF12170 DNA polymerase III tau subunit V interacting with alpha CYD39_RS02445 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CYD39_RS02450 PF02575 YbaB/EbfC DNA-binding family CYD39_RS02455 PF13662 Toprim domain CYD39_RS02455 PF02132 RecR protein CYD39_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS02460 PF00183 Hsp90 protein CYD39_RS02465 PF05191 Adenylate kinase, active site lid CYD39_RS02470 PF00762 Ferrochelatase CYD39_RS02475 PF07859 alpha/beta hydrolase fold CYD39_RS02480 PF00294 pfkB family carbohydrate kinase CYD39_RS02485 PF02254 TrkA-N domain CYD39_RS02485 PF00999 Sodium/hydrogen exchanger family CYD39_RS02490 PF07690 Major Facilitator Superfamily CYD39_RS02495 PF00149 Calcineurin-like phosphoesterase CYD39_RS02495 PF02872 5'-nucleotidase, C-terminal domain CYD39_RS02500 PF04073 Aminoacyl-tRNA editing domain CYD39_RS02505 PF01963 TraB family CYD39_RS02515 PF00403 Heavy-metal-associated domain CYD39_RS02520 PF13411 MerR HTH family regulatory protein CYD39_RS02525 PF01957 NfeD-like C-terminal, partner-binding CYD39_RS02530 PF16200 C-terminal region of band_7 CYD39_RS02530 PF01145 SPFH domain / Band 7 family CYD39_RS02535 PF00005 ABC transporter CYD39_RS02540 PF03649 Uncharacterised protein family (UPF0014) CYD39_RS02545 PF00085 Thioredoxin CYD39_RS02550 PF00106 short chain dehydrogenase CYD39_RS02555 PF13472 GDSL-like Lipase/Acylhydrolase family CYD39_RS02560 PF00005 ABC transporter CYD39_RS02575 PF03180 NLPA lipoprotein CYD39_RS02580 PF09383 NIL domain CYD39_RS02580 PF00005 ABC transporter CYD39_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS02595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS02595 PF03466 LysR substrate binding domain CYD39_RS02600 PF04115 Ureidoglycolate lyase CYD39_RS02605 PF09339 IclR helix-turn-helix domain CYD39_RS02605 PF01614 Bacterial transcriptional regulator CYD39_RS02610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS02610 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS02610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS02615 PF01261 Xylose isomerase-like TIM barrel CYD39_RS02620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYD39_RS02620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYD39_RS02630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CYD39_RS02635 PF01979 Amidohydrolase family CYD39_RS02640 PF00860 Permease family CYD39_RS02645 PF02595 Glycerate kinase family CYD39_RS02650 PF05899 Protein of unknown function (DUF861) CYD39_RS02650 PF07883 Cupin domain CYD39_RS02655 PF01546 Peptidase family M20/M25/M40 CYD39_RS02660 PF02615 Malate/L-lactate dehydrogenase CYD39_RS02665 PF00549 CoA-ligase CYD39_RS02665 PF02629 CoA binding domain CYD39_RS02670 PF06545 Protein of unknown function (DUF1116) CYD39_RS02675 PF11392 Protein of unknown function (DUF2877) CYD39_RS02680 PF00696 Amino acid kinase family CYD39_RS02685 PF02222 ATP-grasp domain CYD39_RS02685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYD39_RS02690 PF00731 AIR carboxylase CYD39_RS02695 PF12850 Calcineurin-like phosphoesterase superfamily domain CYD39_RS02700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYD39_RS02705 PF09190 DALR domain CYD39_RS02705 PF01406 tRNA synthetases class I (C) catalytic domain CYD39_RS02720 PF04307 LexA-binding, inner membrane-associated putative hydrolase CYD39_RS02730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYD39_RS02730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYD39_RS02740 PF00419 Fimbrial protein CYD39_RS02750 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS02750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS02755 PF13953 PapC C-terminal domain CYD39_RS02755 PF13954 PapC N-terminal domain CYD39_RS02755 PF00577 Outer membrane usher protein CYD39_RS02760 PF00419 Fimbrial protein CYD39_RS02765 PF00419 Fimbrial protein CYD39_RS02770 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS02770 PF00072 Response regulator receiver domain CYD39_RS02785 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS02815 PF00535 Glycosyl transferase family 2 CYD39_RS02820 PF04138 GtrA-like protein CYD39_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS02830 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS02830 PF00672 HAMP domain CYD39_RS02840 PF12852 Cupin CYD39_RS02840 PF12833 Helix-turn-helix domain CYD39_RS02845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS02845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD39_RS02850 PF07338 Protein of unknown function (DUF1471) CYD39_RS02855 PF04224 Protein of unknown function, DUF417 CYD39_RS02865 PF00324 Amino acid permease CYD39_RS02870 PF00924 Mechanosensitive ion channel CYD39_RS02875 PF00657 GDSL-like Lipase/Acylhydrolase CYD39_RS02875 PF03797 Autotransporter beta-domain CYD39_RS02880 PF00881 Nitroreductase family CYD39_RS02885 PF04237 YjbR CYD39_RS02890 PF16295 Tetracyclin repressor-like, C-terminal domain CYD39_RS02890 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS02895 PF12833 Helix-turn-helix domain CYD39_RS02900 PF06643 Protein of unknown function (DUF1158) CYD39_RS02905 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYD39_RS02910 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CYD39_RS02910 PF01648 4'-phosphopantetheinyl transferase superfamily CYD39_RS02915 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS02915 PF00593 TonB dependent receptor CYD39_RS02920 PF00756 Putative esterase CYD39_RS02920 PF11806 Domain of unknown function (DUF3327) CYD39_RS02925 PF03621 MbtH-like protein CYD39_RS02930 PF00501 AMP-binding enzyme CYD39_RS02930 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS02930 PF00668 Condensation domain CYD39_RS02930 PF00975 Thioesterase domain CYD39_RS02930 PF00550 Phosphopantetheine attachment site CYD39_RS02935 PF02706 Chain length determinant protein CYD39_RS02940 PF00005 ABC transporter CYD39_RS02945 PF01032 FecCD transport family CYD39_RS02950 PF01032 FecCD transport family CYD39_RS02955 PF05977 Transmembrane secretion effector CYD39_RS02960 PF01497 Periplasmic binding protein CYD39_RS02965 PF00425 chorismate binding enzyme CYD39_RS02970 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS02970 PF00501 AMP-binding enzyme CYD39_RS02975 PF00857 Isochorismatase family CYD39_RS02975 PF00550 Phosphopantetheine attachment site CYD39_RS02985 PF03061 Thioesterase superfamily CYD39_RS02990 PF02554 Carbon starvation protein CstA CYD39_RS02990 PF13722 5TM C-terminal transporter carbon starvation CstA CYD39_RS02995 PF04328 Selenoprotein, putative CYD39_RS03000 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS03005 PF00155 Aminotransferase class I and II CYD39_RS03010 PF02195 ParB-like nuclease domain CYD39_RS03015 PF11922 Domain of unknown function (DUF3440) CYD39_RS03015 PF01507 Phosphoadenosine phosphosulfate reductase family CYD39_RS03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03020 PF03466 LysR substrate binding domain CYD39_RS03025 PF13098 Thioredoxin-like domain CYD39_RS03030 PF00578 AhpC/TSA family CYD39_RS03030 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYD39_RS03035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS03035 PF13192 Thioredoxin domain CYD39_RS03045 PF00384 Molybdopterin oxidoreductase CYD39_RS03045 PF01568 Molydopterin dinucleotide binding domain CYD39_RS03045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS03050 PF13247 4Fe-4S dicluster domain CYD39_RS03060 PF00582 Universal stress protein family CYD39_RS03065 PF13823 Alcohol dehydrogenase GroES-associated CYD39_RS03065 PF00107 Zinc-binding dehydrogenase CYD39_RS03065 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS03070 PF01272 Transcription elongation factor, GreA/GreB, C-term CYD39_RS03070 PF14760 Rnk N-terminus CYD39_RS03075 PF00445 Ribonuclease T2 family CYD39_RS03080 PF00939 Sodium:sulfate symporter transmembrane region CYD39_RS03085 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CYD39_RS03090 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CYD39_RS03095 PF04223 Citrate lyase, alpha subunit (CitF) CYD39_RS03100 PF03328 HpcH/HpaI aldolase/citrate lyase family CYD39_RS03105 PF06857 Malonate decarboxylase delta subunit (MdcD) CYD39_RS03110 PF08218 Citrate lyase ligase C-terminal domain CYD39_RS03115 PF17203 Single cache domain 3 CYD39_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS03115 PF00989 PAS fold CYD39_RS03115 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CYD39_RS03120 PF12431 Transcriptional regulator CYD39_RS03120 PF00072 Response regulator receiver domain CYD39_RS03125 PF03606 C4-dicarboxylate anaerobic carrier CYD39_RS03130 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CYD39_RS03135 PF00313 'Cold-shock' DNA-binding domain CYD39_RS03140 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYD39_RS03145 PF00795 Carbon-nitrogen hydrolase CYD39_RS03150 PF02416 mttA/Hcf106 family CYD39_RS03155 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CYD39_RS03155 PF04055 Radical SAM superfamily CYD39_RS03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03160 PF03466 LysR substrate binding domain CYD39_RS03165 PF03099 Biotin/lipoate A/B protein ligase family CYD39_RS03170 PF04359 Protein of unknown function (DUF493) CYD39_RS03175 PF07943 Penicillin-binding protein 5, C-terminal domain CYD39_RS03175 PF00768 D-alanyl-D-alanine carboxypeptidase CYD39_RS03180 PF05036 Sporulation related domain CYD39_RS03180 PF03330 Lytic transglycolase CYD39_RS03185 PF01098 Cell cycle protein CYD39_RS03190 PF03717 Penicillin-binding Protein dimerisation domain CYD39_RS03190 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS03195 PF02590 Predicted SPOUT methyltransferase CYD39_RS03205 PF00300 Histidine phosphatase superfamily (branch 1) CYD39_RS03210 PF00155 Aminotransferase class I and II CYD39_RS03215 PF01467 Cytidylyltransferase-like CYD39_RS03220 PF06144 DNA polymerase III, delta subunit CYD39_RS03220 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CYD39_RS03225 PF04390 Lipopolysaccharide-assembly CYD39_RS03230 PF08264 Anticodon-binding domain of tRNA CYD39_RS03230 PF00133 tRNA synthetases class I (I, L, M and V) CYD39_RS03230 PF13603 Leucyl-tRNA synthetase, Domain 2 CYD39_RS03240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CYD39_RS03245 PF03812 2-keto-3-deoxygluconate permease CYD39_RS03250 PF02954 Bacterial regulatory protein, Fis family CYD39_RS03250 PF00989 PAS fold CYD39_RS03250 PF00158 Sigma-54 interaction domain CYD39_RS03255 PF07295 Zinc-ribbon containing domain CYD39_RS03265 PF06889 Protein of unknown function (DUF1266) CYD39_RS03275 PF06889 Protein of unknown function (DUF1266) CYD39_RS03285 PF00012 Hsp70 protein CYD39_RS03295 PF01156 Inosine-uridine preferring nucleoside hydrolase CYD39_RS03300 PF00005 ABC transporter CYD39_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS03310 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS03315 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS03320 PF00795 Carbon-nitrogen hydrolase CYD39_RS03325 PF03471 Transporter associated domain CYD39_RS03325 PF00571 CBS domain CYD39_RS03330 PF02130 Uncharacterized protein family UPF0054 CYD39_RS03335 PF02562 PhoH-like protein CYD39_RS03340 PF04055 Radical SAM superfamily CYD39_RS03340 PF01938 TRAM domain CYD39_RS03340 PF00919 Uncharacterized protein family UPF0004 CYD39_RS03345 PF01494 FAD binding domain CYD39_RS03395 PF13537 Glutamine amidotransferase domain CYD39_RS03395 PF00733 Asparagine synthase CYD39_RS03400 PF13344 Haloacid dehalogenase-like hydrolase CYD39_RS03405 PF00480 ROK family CYD39_RS03405 PF01047 MarR family CYD39_RS03410 PF01979 Amidohydrolase family CYD39_RS03415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CYD39_RS03420 PF00367 phosphotransferase system, EIIB CYD39_RS03420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYD39_RS03420 PF02378 Phosphotransferase system, EIIC CYD39_RS03425 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CYD39_RS03425 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYD39_RS03430 PF03573 outer membrane porin, OprD family CYD39_RS03435 PF13982 YbfN-like lipoprotein CYD39_RS03440 PF07690 Major Facilitator Superfamily CYD39_RS03450 PF14537 Cytochrome c3 CYD39_RS03450 PF00890 FAD binding domain CYD39_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03455 PF03466 LysR substrate binding domain CYD39_RS03460 PF01475 Ferric uptake regulator family CYD39_RS03465 PF00258 Flavodoxin CYD39_RS03470 PF01402 Ribbon-helix-helix protein, copG family CYD39_RS03475 PF12697 Alpha/beta hydrolase family CYD39_RS03480 PF17206 SeqA protein N-terminal domain CYD39_RS03480 PF03925 SeqA protein C-terminal domain CYD39_RS03485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYD39_RS03485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYD39_RS03485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYD39_RS03485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYD39_RS03495 PF13520 Amino acid permease CYD39_RS03500 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS03500 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS03500 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYD39_RS03505 PF10940 Protein of unknown function (DUF2618) CYD39_RS03510 PF00072 Response regulator receiver domain CYD39_RS03510 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS03515 PF13493 Domain of unknown function (DUF4118) CYD39_RS03515 PF02702 Osmosensitive K+ channel His kinase sensor domain CYD39_RS03515 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS03515 PF13492 GAF domain CYD39_RS03520 PF02669 K+-transporting ATPase, c chain CYD39_RS03530 PF03814 Potassium-transporting ATPase A subunit CYD39_RS03535 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CYD39_RS03540 PF10725 Protein of unknown function (DUF2517) CYD39_RS03545 PF00875 DNA photolyase CYD39_RS03545 PF03441 FAD binding domain of DNA photolyase CYD39_RS03550 PF00854 POT family CYD39_RS03555 PF01784 NIF3 (NGG1p interacting factor 3) CYD39_RS03560 PF02682 Carboxyltransferase domain, subdomain C and D CYD39_RS03565 PF02626 Carboxyltransferase domain, subdomain A and B CYD39_RS03570 PF03746 LamB/YcsF family CYD39_RS03575 PF06827 Zinc finger found in FPG and IleRS CYD39_RS03575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYD39_RS03575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYD39_RS03580 PF05145 Transition state regulatory protein AbrB CYD39_RS03585 PF00285 Citrate synthase, C-terminal domain CYD39_RS03590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYD39_RS03595 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYD39_RS03600 PF00890 FAD binding domain CYD39_RS03600 PF02910 Fumarate reductase flavoprotein C-term CYD39_RS03605 PF13085 2Fe-2S iron-sulfur cluster binding domain CYD39_RS03610 PF16078 2-oxoglutarate dehydrogenase N-terminus CYD39_RS03610 PF02779 Transketolase, pyrimidine binding domain CYD39_RS03610 PF16870 2-oxoglutarate dehydrogenase C-terminal CYD39_RS03610 PF00676 Dehydrogenase E1 component CYD39_RS03615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYD39_RS03615 PF02817 e3 binding domain CYD39_RS03615 PF00364 Biotin-requiring enzyme CYD39_RS03620 PF00549 CoA-ligase CYD39_RS03620 PF08442 ATP-grasp domain CYD39_RS03625 PF00549 CoA-ligase CYD39_RS03625 PF02629 CoA binding domain CYD39_RS03630 PF01654 Cytochrome bd terminal oxidase subunit I CYD39_RS03635 PF02322 Cytochrome bd terminal oxidase subunit II CYD39_RS03640 PF08173 Membrane bound YbgT-like protein CYD39_RS03645 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CYD39_RS03650 PF03061 Thioesterase superfamily CYD39_RS03655 PF01618 MotA/TolQ/ExbB proton channel family CYD39_RS03660 PF02472 Biopolymer transport protein ExbD/TolR CYD39_RS03665 PF06519 TolA C-terminal CYD39_RS03670 PF04052 TolB amino-terminal domain CYD39_RS03670 PF07676 WD40-like Beta Propeller Repeat CYD39_RS03675 PF00691 OmpA family CYD39_RS03680 PF16331 TolA binding protein trimerisation CYD39_RS03680 PF13174 Tetratricopeptide repeat CYD39_RS03710 PF02445 Quinolinate synthetase A protein CYD39_RS03715 PF04973 Nicotinamide mononucleotide transporter CYD39_RS03720 PF01545 Cation efflux family CYD39_RS03725 PF13985 YbgS-like protein CYD39_RS03730 PF00793 DAHP synthetase I family CYD39_RS03735 PF05681 Fumarate hydratase (Fumerase) CYD39_RS03735 PF05683 Fumarase C-terminus CYD39_RS03740 PF05681 Fumarate hydratase (Fumerase) CYD39_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03745 PF03466 LysR substrate binding domain CYD39_RS03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03750 PF03466 LysR substrate binding domain CYD39_RS03755 PF02080 TrkA-C domain CYD39_RS03755 PF03600 Citrate transporter CYD39_RS03760 PF04277 Oxaloacetate decarboxylase, gamma chain CYD39_RS03765 PF00682 HMGL-like CYD39_RS03765 PF00364 Biotin-requiring enzyme CYD39_RS03765 PF02436 Conserved carboxylase domain CYD39_RS03770 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CYD39_RS03775 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CYD39_RS03780 PF01032 FecCD transport family CYD39_RS03785 PF00005 ABC transporter CYD39_RS03790 PF00300 Histidine phosphatase superfamily (branch 1) CYD39_RS03795 PF01263 Aldose 1-epimerase CYD39_RS03800 PF10509 Galactokinase galactose-binding signature CYD39_RS03800 PF00288 GHMP kinases N terminal domain CYD39_RS03800 PF08544 GHMP kinases C terminal CYD39_RS03805 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CYD39_RS03805 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CYD39_RS03810 PF16363 GDP-mannose 4,6 dehydratase CYD39_RS03820 PF00005 ABC transporter CYD39_RS03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS03825 PF03459 TOBE domain CYD39_RS03830 PF10766 Multidrug efflux pump-associated protein AcrZ CYD39_RS03840 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS03845 PF00005 ABC transporter CYD39_RS03845 PF03459 TOBE domain CYD39_RS03855 PF10282 Lactonase, 7-bladed beta-propeller CYD39_RS03860 PF01095 Pectinesterase CYD39_RS03865 PF01979 Amidohydrolase family CYD39_RS03870 PF00491 Arginase family CYD39_RS03875 PF07702 UTRA domain CYD39_RS03875 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS03880 PF17391 Urocanase N-terminal domain CYD39_RS03880 PF01175 Urocanase Rossmann-like domain CYD39_RS03880 PF17392 Urocanase C-terminal domain CYD39_RS03885 PF00221 Aromatic amino acid lyase CYD39_RS03890 PF01161 Phosphatidylethanolamine-binding protein CYD39_RS03895 PF00202 Aminotransferase class-III CYD39_RS03900 PF06968 Biotin and Thiamin Synthesis associated domain CYD39_RS03900 PF04055 Radical SAM superfamily CYD39_RS03905 PF00155 Aminotransferase class I and II CYD39_RS03910 PF08241 Methyltransferase domain CYD39_RS03925 PF02151 UvrB/uvrC motif CYD39_RS03925 PF12344 Ultra-violet resistance protein B CYD39_RS03925 PF04851 Type III restriction enzyme, res subunit CYD39_RS03925 PF00271 Helicase conserved C-terminal domain CYD39_RS03925 PF17757 UvrB interaction domain CYD39_RS03930 PF14496 C-terminal novel E3 ligase, LRR-interacting CYD39_RS03930 PF12468 Type III secretion system leucine rich repeat protein CYD39_RS03935 PF01933 Uncharacterised protein family UPF0052 CYD39_RS03940 PF04055 Radical SAM superfamily CYD39_RS03940 PF06463 Molybdenum Cofactor Synthesis C CYD39_RS03945 PF00994 Probable molybdopterin binding domain CYD39_RS03950 PF01967 MoaC family CYD39_RS03955 PF02597 ThiS family CYD39_RS03960 PF02391 MoaE protein CYD39_RS03965 PF01027 Inhibitor of apoptosis-promoting Bax1 CYD39_RS03985 PF03706 Lysylphosphatidylglycerol synthase TM region CYD39_RS03990 PF13091 PLD-like domain CYD39_RS03995 PF03372 Endonuclease/Exonuclease/phosphatase family CYD39_RS04000 PF11076 Putative inner membrane protein YbhQ CYD39_RS04015 PF00005 ABC transporter CYD39_RS04020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS04025 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS04025 PF09209 Tetracyclin repressor-like, C-terminal domain CYD39_RS04030 PF00271 Helicase conserved C-terminal domain CYD39_RS04030 PF00270 DEAD/DEAH box helicase CYD39_RS04040 PF06733 DEAD_2 CYD39_RS04040 PF13307 Helicase C-terminal domain CYD39_RS04045 PF02885 Glycosyl transferase family, helical bundle domain CYD39_RS04050 PF07338 Protein of unknown function (DUF1471) CYD39_RS04055 PF01258 Prokaryotic dksA/traR C4-type zinc finger CYD39_RS04060 PF05971 RNA methyltransferase CYD39_RS04065 PF00924 Mechanosensitive ion channel CYD39_RS04070 PF00005 ABC transporter CYD39_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04080 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS04085 PF00210 Ferritin-like domain CYD39_RS04090 PF00892 EamA-like transporter family CYD39_RS04095 PF13505 Outer membrane protein beta-barrel domain CYD39_RS04100 PF00884 Sulfatase CYD39_RS04110 PF02742 Iron dependent repressor, metal binding and dimerisation domain CYD39_RS04110 PF01325 Iron dependent repressor, N-terminal DNA binding domain CYD39_RS04115 PF03600 Citrate transporter CYD39_RS04120 PF03734 L,D-transpeptidase catalytic domain CYD39_RS04120 PF17969 L,D-transpeptidase C-terminal domain CYD39_RS04125 PF12848 ABC transporter CYD39_RS04125 PF00005 ABC transporter CYD39_RS04140 PF07350 Protein of unknown function (DUF1479) CYD39_RS04150 PF02901 Pyruvate formate lyase-like CYD39_RS04150 PF01228 Glycine radical CYD39_RS04155 PF04055 Radical SAM superfamily CYD39_RS04160 PF00899 ThiF family CYD39_RS04165 PF00994 Probable molybdopterin binding domain CYD39_RS04165 PF03454 MoeA C-terminal region (domain IV) CYD39_RS04165 PF03453 MoeA N-terminal region (domain I and II) CYD39_RS04170 PF01112 Asparaginase CYD39_RS04175 PF00005 ABC transporter CYD39_RS04175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS04180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04190 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04195 PF18693 TRAM domain CYD39_RS04195 PF00919 Uncharacterized protein family UPF0004 CYD39_RS04195 PF04055 Radical SAM superfamily CYD39_RS04200 PF10799 Biofilm formation protein (YliH/bssR) CYD39_RS04205 PF07995 Glucose / Sorbosone dehydrogenase CYD39_RS04210 PF13417 Glutathione S-transferase, N-terminal domain CYD39_RS04210 PF00043 Glutathione S-transferase, C-terminal domain CYD39_RS04215 PF00768 D-alanyl-D-alanine carboxypeptidase CYD39_RS04215 PF07943 Penicillin-binding protein 5, C-terminal domain CYD39_RS04220 PF08220 DeoR-like helix-turn-helix domain CYD39_RS04220 PF00455 DeoR C terminal sensor domain CYD39_RS04225 PF01569 PAP2 superfamily CYD39_RS04230 PF07690 Major Facilitator Superfamily CYD39_RS04240 PF07690 Major Facilitator Superfamily CYD39_RS04245 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS04255 PF02080 TrkA-C domain CYD39_RS04255 PF06826 Predicted Permease Membrane Region CYD39_RS04260 PF11045 Putative inner membrane protein of Enterobacteriaceae CYD39_RS04265 PF00462 Glutaredoxin CYD39_RS04270 PF07214 Protein of unknown function (DUF1418) CYD39_RS04275 PF00881 Nitroreductase family CYD39_RS04280 PF18030 RimK PreATP-grasp domain CYD39_RS04280 PF08443 RimK-like ATP-grasp domain CYD39_RS04285 PF10722 Putative bacterial sensory transduction regulator CYD39_RS04290 PF13416 Bacterial extracellular solute-binding protein CYD39_RS04295 PF08402 TOBE domain CYD39_RS04295 PF00005 ABC transporter CYD39_RS04300 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04310 PF10767 Protein of unknown function (DUF2593) CYD39_RS04315 PF05958 tRNA (Uracil-5-)-methyltransferase CYD39_RS04320 PF03611 PTS system sugar-specific permease component CYD39_RS04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS04340 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04345 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS04350 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS04355 PF00005 ABC transporter CYD39_RS04360 PF12883 Protein of unknown function (DUF3828) CYD39_RS04365 PF01906 Putative heavy-metal-binding CYD39_RS04370 PF01510 N-acetylmuramoyl-L-alanine amidase CYD39_RS04375 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS04380 PF13460 NAD(P)H-binding CYD39_RS04380 PF11066 Protein of unknown function (DUF2867) CYD39_RS04385 PF01212 Beta-eliminating lyase CYD39_RS04390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS04390 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS04390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS04395 PF00175 Oxidoreductase NAD-binding domain CYD39_RS04395 PF00111 2Fe-2S iron-sulfur cluster binding domain CYD39_RS04395 PF00970 Oxidoreductase FAD-binding domain CYD39_RS04400 PF03063 Prismane/CO dehydrogenase family CYD39_RS04405 PF03956 Lysine exporter LysO CYD39_RS04410 PF11398 Protein of unknown function (DUF2813) CYD39_RS04415 PF04393 Protein of unknown function (DUF535) CYD39_RS04420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS04425 PF12704 MacB-like periplasmic core domain CYD39_RS04425 PF00005 ABC transporter CYD39_RS04425 PF02687 FtsX-like permease family CYD39_RS04430 PF00313 'Cold-shock' DNA-binding domain CYD39_RS04435 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYD39_RS04440 PF02861 Clp amino terminal domain, pathogenicity island component CYD39_RS04440 PF10431 C-terminal, D2-small domain, of ClpB protein CYD39_RS04440 PF17871 AAA lid domain CYD39_RS04440 PF07724 AAA domain (Cdc48 subfamily) CYD39_RS04440 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS04485 PF00857 Isochorismatase family CYD39_RS04490 PF02678 Pirin CYD39_RS04490 PF05726 Pirin C-terminal cupin domain CYD39_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS04495 PF03466 LysR substrate binding domain CYD39_RS04500 PF01176 Translation initiation factor 1A / IF-1 CYD39_RS04510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYD39_RS04515 PF00005 ABC transporter CYD39_RS04515 PF00664 ABC transporter transmembrane region CYD39_RS04520 PF00005 ABC transporter CYD39_RS04520 PF00664 ABC transporter transmembrane region CYD39_RS04525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS04530 PF01037 Lrp/AsnC ligand binding domain CYD39_RS04535 PF09397 Ftsk gamma domain CYD39_RS04535 PF01580 FtsK/SpoIIIE family CYD39_RS04535 PF17854 FtsK alpha domain CYD39_RS04535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYD39_RS04540 PF03548 Outer membrane lipoprotein carrier protein LolA CYD39_RS04545 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS04545 PF12002 MgsA AAA+ ATPase C terminal CYD39_RS04545 PF16193 AAA C-terminal domain CYD39_RS04550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYD39_RS04550 PF02403 Seryl-tRNA synthetase N-terminal domain CYD39_RS04555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS04555 PF01568 Molydopterin dinucleotide binding domain CYD39_RS04555 PF00384 Molybdopterin oxidoreductase CYD39_RS04560 PF12800 4Fe-4S binding domain CYD39_RS04560 PF13247 4Fe-4S dicluster domain CYD39_RS04565 PF04976 DMSO reductase anchor subunit (DmsC) CYD39_RS04570 PF07690 Major Facilitator Superfamily CYD39_RS04575 PF13520 Amino acid permease CYD39_RS04580 PF04055 Radical SAM superfamily CYD39_RS04590 PF11047 Salmonella outer protein D CYD39_RS04595 PF02901 Pyruvate formate lyase-like CYD39_RS04595 PF01228 Glycine radical CYD39_RS04600 PF01226 Formate/nitrite transporter CYD39_RS04605 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CYD39_RS04605 PF18381 YcaO cyclodehydratase C-terminal domain CYD39_RS04610 PF04239 Protein of unknown function (DUF421) CYD39_RS04615 PF00266 Aminotransferase class-V CYD39_RS04620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYD39_RS04625 PF01435 Peptidase family M48 CYD39_RS04630 PF02224 Cytidylate kinase CYD39_RS04635 PF00575 S1 RNA binding domain CYD39_RS04640 PF00216 Bacterial DNA-binding protein CYD39_RS04645 PF03772 Competence protein CYD39_RS04645 PF00753 Metallo-beta-lactamase superfamily CYD39_RS04650 PF00664 ABC transporter transmembrane region CYD39_RS04650 PF00005 ABC transporter CYD39_RS04655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CYD39_RS04660 PF06224 Winged helix DNA-binding domain CYD39_RS04665 PF03966 Trm112p-like protein CYD39_RS04670 PF02348 Cytidylyltransferase CYD39_RS04675 PF01636 Phosphotransferase enzyme family CYD39_RS04680 PF02698 DUF218 domain CYD39_RS04685 PF13847 Methyltransferase domain CYD39_RS04690 PF03882 MukF winged-helix domain CYD39_RS04690 PF17192 MukF middle domain CYD39_RS04690 PF17193 MukF C-terminal domain CYD39_RS04695 PF04288 MukE-like family CYD39_RS04700 PF16330 MukB hinge domain CYD39_RS04700 PF04310 MukB N-terminal CYD39_RS04705 PF01471 Putative peptidoglycan binding domain CYD39_RS04705 PF03734 L,D-transpeptidase catalytic domain CYD39_RS04710 PF05951 Bacterial protein of unknown function (DUF882) CYD39_RS04715 PF00753 Metallo-beta-lactamase superfamily CYD39_RS04720 PF00155 Aminotransferase class I and II CYD39_RS04725 PF00267 Gram-negative porin CYD39_RS04730 PF00152 tRNA synthetases class II (D, K and N) CYD39_RS04730 PF01336 OB-fold nucleic acid binding domain CYD39_RS04735 PF01037 Lrp/AsnC ligand binding domain CYD39_RS04735 PF13404 AsnC-type helix-turn-helix domain CYD39_RS04745 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS04750 PF01235 Sodium:alanine symporter family CYD39_RS04755 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYD39_RS04755 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYD39_RS04760 PF01433 Peptidase family M1 domain CYD39_RS04760 PF11940 Domain of unknown function (DUF3458) Ig-like fold CYD39_RS04760 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CYD39_RS04765 PF01180 Dihydroorotate dehydrogenase CYD39_RS04770 PF07126 Cell-division protein ZapC CYD39_RS04775 PF03476 MOSC N-terminal beta barrel domain CYD39_RS04775 PF00111 2Fe-2S iron-sulfur cluster binding domain CYD39_RS04775 PF03473 MOSC domain CYD39_RS04780 PF01170 Putative RNA methylase family UPF0020 CYD39_RS04780 PF10672 S-adenosylmethionine-dependent methyltransferase CYD39_RS04780 PF02926 THUMP domain CYD39_RS04785 PF12848 ABC transporter CYD39_RS04785 PF16326 ABC transporter C-terminal domain CYD39_RS04785 PF00005 ABC transporter CYD39_RS04790 PF04403 Paraquat-inducible protein A CYD39_RS04795 PF02470 MlaD protein CYD39_RS04800 PF03886 ABC-type transport auxiliary lipoprotein component CYD39_RS04805 PF04957 Ribosome modulation factor CYD39_RS04810 PF07977 FabA-like domain CYD39_RS04815 PF13654 AAA domain CYD39_RS04815 PF05362 Lon protease (S16) C-terminal proteolytic domain CYD39_RS04820 PF06303 MatP N-terminal domain CYD39_RS04820 PF17414 MatP C-terminal ribbon-helix-helix domain CYD39_RS04825 PF00691 OmpA family CYD39_RS04825 PF01389 OmpA-like transmembrane domain CYD39_RS04830 PF03846 Cell division inhibitor SulA CYD39_RS04835 PF04994 TfoX C-terminal domain CYD39_RS04835 PF04993 TfoX N-terminal domain CYD39_RS04840 PF12805 FUSC-like inner membrane protein yccS CYD39_RS04845 PF03733 Inner membrane component domain CYD39_RS04850 PF12462 DNA helicase IV / RNA helicase N terminal CYD39_RS04850 PF00580 UvrD/REP helicase N-terminal domain CYD39_RS04850 PF13361 UvrD-like helicase C-terminal domain CYD39_RS04855 PF02142 MGS-like domain CYD39_RS04860 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CYD39_RS04865 PF13380 CoA binding domain CYD39_RS04870 PF08755 Hemimethylated DNA-binding protein YccV like CYD39_RS04875 PF17785 PUA-like domain CYD39_RS04875 PF10672 S-adenosylmethionine-dependent methyltransferase CYD39_RS04880 PF01161 Phosphatidylethanolamine-binding protein CYD39_RS04885 PF12833 Helix-turn-helix domain CYD39_RS04890 PF00708 Acylphosphatase CYD39_RS04895 PF04358 DsrC like protein CYD39_RS04900 PF01027 Inhibitor of apoptosis-promoting Bax1 CYD39_RS04915 PF00805 Pentapeptide repeats (8 copies) CYD39_RS04925 PF07824 Type III secretion chaperone domain CYD39_RS04930 PF05925 Enterobacterial virulence protein IpgD CYD39_RS04935 PF13132 Domain of unknown function (DUF3950) CYD39_RS04945 PF03577 Peptidase family C69 CYD39_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS04950 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS04955 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS04955 PF00072 Response regulator receiver domain CYD39_RS04960 PF00576 HIUase/Transthyretin family CYD39_RS04965 PF01613 Flavin reductase like domain CYD39_RS04970 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CYD39_RS04970 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CYD39_RS04975 PF01047 MarR family CYD39_RS04980 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYD39_RS04985 PF00171 Aldehyde dehydrogenase family CYD39_RS04990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CYD39_RS04995 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CYD39_RS05000 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYD39_RS05005 PF03328 HpcH/HpaI aldolase/citrate lyase family CYD39_RS05010 PF07690 Major Facilitator Superfamily CYD39_RS05020 PF12706 Beta-lactamase superfamily domain CYD39_RS05035 PF01556 DnaJ C terminal domain CYD39_RS05035 PF00226 DnaJ domain CYD39_RS05045 PF02683 Cytochrome C biogenesis protein transmembrane region CYD39_RS05045 PF13098 Thioredoxin-like domain CYD39_RS05045 PF11412 Disulphide bond corrector protein DsbC CYD39_RS05050 PF13462 Thioredoxin CYD39_RS05050 PF06965 Na+/H+ antiporter 1 CYD39_RS05055 PF00578 AhpC/TSA family CYD39_RS05060 PF00328 Histidine phosphatase superfamily (branch 2) CYD39_RS05065 PF13993 YccJ-like protein CYD39_RS05070 PF03358 NADPH-dependent FMN reductase CYD39_RS05075 PF10685 Stress-induced bacterial acidophilic repeat motif CYD39_RS05080 PF08362 YcdC-like protein, C-terminal region CYD39_RS05080 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS05090 PF00171 Aldehyde dehydrogenase family CYD39_RS05090 PF01619 Proline dehydrogenase CYD39_RS05090 PF14850 DNA-binding domain of Proline dehydrogenase CYD39_RS05090 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CYD39_RS05095 PF00474 Sodium:solute symporter family CYD39_RS05100 PF02562 PhoH-like protein CYD39_RS05160 PF05638 Type VI secretion system effector, Hcp CYD39_RS05170 PF06744 Type VI secretion protein IcmF C-terminal CYD39_RS05170 PF14331 ImcF-related N-terminal domain CYD39_RS05170 PF06761 Intracellular multiplication and human macrophage-killing CYD39_RS05185 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS05185 PF07724 AAA domain (Cdc48 subfamily) CYD39_RS05185 PF17871 AAA lid domain CYD39_RS05185 PF10431 C-terminal, D2-small domain, of ClpB protein CYD39_RS05195 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CYD39_RS05215 PF05947 Type VI secretion system, TssF CYD39_RS05225 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CYD39_RS05240 PF05638 Type VI secretion system effector, Hcp CYD39_RS05245 PF04717 Type VI secretion system, phage-baseplate injector CYD39_RS05250 PF14220 Domain of unknown function (DUF4329) CYD39_RS05250 PF05593 RHS Repeat CYD39_RS05250 PF03527 RHS protein CYD39_RS05280 PF00313 'Cold-shock' DNA-binding domain CYD39_RS05290 PF00267 Gram-negative porin CYD39_RS05300 PF01966 HD domain CYD39_RS05305 PF18284 DNA methylase N-terminal domain CYD39_RS05305 PF00145 C-5 cytosine-specific DNA methylase CYD39_RS05310 PF03852 DNA mismatch endonuclease Vsr CYD39_RS05315 PF00892 EamA-like transporter family CYD39_RS05320 PF05661 Protein of unknown function (DUF808) CYD39_RS05325 PF09926 Uncharacterized small protein (DUF2158) CYD39_RS05330 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS05330 PF17151 Periplasmic sensor domain CYD39_RS05340 PF10733 Protein of unknown function (DUF2525) CYD39_RS05345 PF10781 Dextransucrase DSRB CYD39_RS05350 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS05355 PF01311 Bacterial export proteins, family 1 CYD39_RS05360 PF01313 Bacterial export proteins, family 3 CYD39_RS05365 PF00813 FliP family CYD39_RS05370 PF04347 Flagellar biosynthesis protein, FliO CYD39_RS05375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYD39_RS05375 PF16973 Flagellar motor switch protein FliN N-terminal CYD39_RS05380 PF02154 Flagellar motor switch protein FliM CYD39_RS05380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYD39_RS05385 PF03748 Flagellar basal body-associated protein FliL CYD39_RS05390 PF02120 Flagellar hook-length control protein FliK CYD39_RS05395 PF02050 Flagellar FliJ protein CYD39_RS05400 PF18269 T3SS EscN ATPase C-terminal domain CYD39_RS05400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS05405 PF02108 Flagellar assembly protein FliH CYD39_RS05410 PF14841 FliG middle domain CYD39_RS05410 PF14842 FliG N-terminal domain CYD39_RS05410 PF01706 FliG C-terminal domain CYD39_RS05415 PF01514 Secretory protein of YscJ/FliF family CYD39_RS05415 PF08345 Flagellar M-ring protein C-terminal CYD39_RS05420 PF02049 Flagellar hook-basal body complex protein FliE CYD39_RS05430 PF01206 Sulfurtransferase TusA CYD39_RS05435 PF04143 Sulphur transport CYD39_RS05440 PF13987 YedD-like protein CYD39_RS05445 PF00128 Alpha amylase, catalytic domain CYD39_RS05445 PF02806 Alpha amylase, C-terminal all-beta domain CYD39_RS05450 PF05400 Flagellar protein FliT CYD39_RS05455 PF02561 Flagellar protein FliS CYD39_RS05460 PF02465 Flagellar hook-associated protein 2 N-terminus CYD39_RS05460 PF07196 Flagellin hook IN motif CYD39_RS05460 PF07195 Flagellar hook-associated protein 2 C-terminus CYD39_RS05470 PF00700 Bacterial flagellin C-terminal helical region CYD39_RS05470 PF00669 Bacterial flagellin N-terminal helical region CYD39_RS05480 PF04542 Sigma-70 region 2 CYD39_RS05480 PF04539 Sigma-70 region 3 CYD39_RS05480 PF04545 Sigma-70, region 4 CYD39_RS05485 PF02899 Phage integrase, N-terminal SAM-like domain CYD39_RS05490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS05495 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS05500 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS05505 PF00005 ABC transporter CYD39_RS05510 PF03472 Autoinducer binding domain CYD39_RS05510 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS05515 PF10769 Protein of unknown function (DUF2594) CYD39_RS05525 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS05525 PF00072 Response regulator receiver domain CYD39_RS05530 PF01541 GIY-YIG catalytic domain CYD39_RS05530 PF02151 UvrB/uvrC motif CYD39_RS05530 PF08459 UvrC Helix-hairpin-helix N-terminal CYD39_RS05535 PF01066 CDP-alcohol phosphatidyltransferase CYD39_RS05570 PF02810 SEC-C motif CYD39_RS05570 PF03695 Uncharacterised protein family (UPF0149) CYD39_RS05575 PF03222 Tryptophan/tyrosine permease family CYD39_RS05580 PF10678 Protein of unknown function (DUF2492) CYD39_RS05585 PF00210 Ferritin-like domain CYD39_RS05590 PF13992 YecR-like lipoprotein CYD39_RS05600 PF00210 Ferritin-like domain CYD39_RS05615 PF02358 Trehalose-phosphatase CYD39_RS05620 PF00982 Glycosyltransferase family 20 CYD39_RS05625 PF00582 Universal stress protein family CYD39_RS05635 PF05247 Flagellar transcriptional activator (FlhD) CYD39_RS05640 PF05280 Flagellar transcriptional activator (FlhC) CYD39_RS05645 PF01618 MotA/TolQ/ExbB proton channel family CYD39_RS05650 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYD39_RS05650 PF00691 OmpA family CYD39_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS05655 PF01584 CheW-like domain CYD39_RS05655 PF02895 Signal transducing histidine kinase, homodimeric domain CYD39_RS05655 PF01627 Hpt domain CYD39_RS05655 PF09078 CheY binding CYD39_RS05660 PF01584 CheW-like domain CYD39_RS05665 PF00672 HAMP domain CYD39_RS05665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS05665 PF02203 Tar ligand binding domain homologue CYD39_RS05670 PF01739 CheR methyltransferase, SAM binding domain CYD39_RS05670 PF03705 CheR methyltransferase, all-alpha domain CYD39_RS05675 PF01339 CheB methylesterase CYD39_RS05675 PF00072 Response regulator receiver domain CYD39_RS05680 PF00072 Response regulator receiver domain CYD39_RS05685 PF04344 Chemotaxis phosphatase, CheZ CYD39_RS05690 PF01312 FlhB HrpN YscU SpaS Family CYD39_RS05695 PF00771 FHIPEP family CYD39_RS05700 PF06366 Flagellar protein FlhE CYD39_RS05705 PF07470 Glycosyl Hydrolase Family 88 CYD39_RS05710 PF03717 Penicillin-binding Protein dimerisation domain CYD39_RS05710 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS05715 PF05746 DALR anticodon binding domain CYD39_RS05715 PF03485 Arginyl tRNA synthetase N terminal domain CYD39_RS05715 PF00750 tRNA synthetases class I (R) CYD39_RS05720 PF06185 YecM protein CYD39_RS05725 PF03932 CutC family CYD39_RS05730 PF08003 Protein of unknown function (DUF1698) CYD39_RS05735 PF13649 Methyltransferase domain CYD39_RS05740 PF01124 MAPEG family CYD39_RS05745 PF01904 Protein of unknown function DUF72 CYD39_RS05750 PF00857 Isochorismatase family CYD39_RS05755 PF02938 GAD domain CYD39_RS05755 PF01336 OB-fold nucleic acid binding domain CYD39_RS05755 PF00152 tRNA synthetases class II (D, K and N) CYD39_RS05760 PF00293 NUDIX domain CYD39_RS05765 PF01709 Transcriptional regulator CYD39_RS05770 PF02075 Crossover junction endodeoxyribonuclease RuvC CYD39_RS05775 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CYD39_RS05785 PF01330 RuvA N terminal domain CYD39_RS05785 PF07499 RuvA, C-terminal domain CYD39_RS05790 PF17864 RuvB AAA lid domain CYD39_RS05790 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYD39_RS05790 PF05491 RuvB C-terminal winged helix domain CYD39_RS05795 PF00950 ABC 3 transport family CYD39_RS05800 PF00005 ABC transporter CYD39_RS05805 PF01297 Zinc-uptake complex component A periplasmic CYD39_RS05810 PF08525 Opacity-associated protein A N-terminal motif CYD39_RS05810 PF01551 Peptidase family M23 CYD39_RS05810 PF01476 LysM domain CYD39_RS05815 PF03279 Bacterial lipid A biosynthesis acyltransferase CYD39_RS05820 PF00224 Pyruvate kinase, barrel domain CYD39_RS05820 PF02887 Pyruvate kinase, alpha/beta domain CYD39_RS05825 PF01380 SIS domain CYD39_RS05825 PF01418 Helix-turn-helix domain, rpiR family CYD39_RS05830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CYD39_RS05830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CYD39_RS05835 PF00920 Dehydratase family CYD39_RS05840 PF01081 KDPG and KHG aldolase CYD39_RS05845 PF02222 ATP-grasp domain CYD39_RS05850 PF07130 YebG protein CYD39_RS05855 PF13995 YebF-like protein CYD39_RS05860 PF04391 Protein of unknown function (DUF533) CYD39_RS05865 PF00326 Prolyl oligopeptidase family CYD39_RS05865 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYD39_RS05870 PF00929 Exonuclease CYD39_RS05875 PF00795 Carbon-nitrogen hydrolase CYD39_RS05880 PF06440 DNA polymerase III, theta subunit CYD39_RS05885 PF04234 CopC domain CYD39_RS05890 PF05425 Copper resistance protein D CYD39_RS05895 PF10709 Protein of unknown function (DUF2511) CYD39_RS05910 PF14496 C-terminal novel E3 ligase, LRR-interacting CYD39_RS05910 PF12468 Type III secretion system leucine rich repeat protein CYD39_RS05935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CYD39_RS05940 PF00583 Acetyltransferase (GNAT) family CYD39_RS05950 PF01381 Helix-turn-helix CYD39_RS05955 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CYD39_RS05985 PF07166 Protein of unknown function (DUF1398) CYD39_RS05995 PF05364 Salmonella type III secretion SopE effector N-terminus CYD39_RS05995 PF07487 SopE GEF domain CYD39_RS06005 PF00149 Calcineurin-like phosphoesterase CYD39_RS06010 PF07358 Protein of unknown function (DUF1482) CYD39_RS06015 PF07351 Protein of unknown function (DUF1480) CYD39_RS06020 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CYD39_RS06020 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CYD39_RS06020 PF01189 16S rRNA methyltransferase RsmB/F CYD39_RS06025 PF02470 MlaD protein CYD39_RS06030 PF04403 Paraquat-inducible protein A CYD39_RS06035 PF13185 GAF domain CYD39_RS06040 PF17516 ProQ C-terminal domain CYD39_RS06040 PF04352 ProQ/FINO family CYD39_RS06045 PF11818 C-terminal domain of tail specific protease (DUF3340) CYD39_RS06045 PF17804 Tail specific protease N-terminal domain CYD39_RS06045 PF03572 Peptidase family S41 CYD39_RS06045 PF00595 PDZ domain CYD39_RS06050 PF01435 Peptidase family M48 CYD39_RS06055 PF07690 Major Facilitator Superfamily CYD39_RS06060 PF09339 IclR helix-turn-helix domain CYD39_RS06060 PF01614 Bacterial transcriptional regulator CYD39_RS06065 PF13996 YobH-like protein CYD39_RS06070 PF13998 MgrB protein CYD39_RS06075 PF13974 YebO-like protein CYD39_RS06080 PF10736 Protein of unknown function (DUF2627) CYD39_RS06085 PF00313 'Cold-shock' DNA-binding domain CYD39_RS06090 PF03717 Penicillin-binding Protein dimerisation domain CYD39_RS06090 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS06095 PF13847 Methyltransferase domain CYD39_RS06100 PF02659 Putative manganese efflux pump CYD39_RS06105 PF06173 Protein of unknown function (DUF986) CYD39_RS06110 PF03613 PTS system mannose/fructose/sorbose family IID component CYD39_RS06115 PF03609 PTS system sorbose-specific iic component CYD39_RS06120 PF03830 PTS system sorbose subfamily IIB component CYD39_RS06120 PF03610 PTS system fructose IIA component CYD39_RS06125 PF03741 Integral membrane protein TerC family CYD39_RS06125 PF03471 Transporter associated domain CYD39_RS06130 PF12792 CSS motif domain associated with EAL CYD39_RS06130 PF00563 EAL domain CYD39_RS06135 PF03315 Serine dehydratase beta chain CYD39_RS06135 PF03313 Serine dehydratase alpha chain CYD39_RS06140 PF00293 NUDIX domain CYD39_RS06145 PF04715 Anthranilate synthase component I, N terminal region CYD39_RS06145 PF00425 chorismate binding enzyme CYD39_RS06150 PF03701 Uncharacterised protein family (UPF0181) CYD39_RS06155 PF01042 Endoribonuclease L-PSP CYD39_RS06160 PF04851 Type III restriction enzyme, res subunit CYD39_RS06160 PF13307 Helicase C-terminal domain CYD39_RS06165 PF00814 Glycoprotease family CYD39_RS06170 PF03843 Outer membrane lipoprotein Slp family CYD39_RS06175 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS06175 PF00501 AMP-binding enzyme CYD39_RS06180 PF00570 HRDC domain CYD39_RS06180 PF01612 3'-5' exonuclease CYD39_RS06185 PF03776 Septum formation topological specificity factor MinE CYD39_RS06190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYD39_RS06195 PF05209 Septum formation inhibitor MinC, N-terminal domain CYD39_RS06195 PF03775 Septum formation inhibitor MinC, C-terminal domain CYD39_RS06200 PF05166 YcgL domain CYD39_RS06205 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYD39_RS06210 PF03692 Putative zinc- or iron-chelating domain CYD39_RS06220 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CYD39_RS06230 PF02600 Disulfide bond formation protein DsbB CYD39_RS06235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CYD39_RS06240 PF07840 FadR C-terminal domain CYD39_RS06240 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS06245 PF04293 SpoVR like protein CYD39_RS06250 PF01266 FAD dependent oxidoreductase CYD39_RS06255 PF00842 Alanine racemase, C-terminal domain CYD39_RS06255 PF01168 Alanine racemase, N-terminal domain CYD39_RS06260 PF03471 Transporter associated domain CYD39_RS06260 PF02080 TrkA-C domain CYD39_RS06260 PF00999 Sodium/hydrogen exchanger family CYD39_RS06265 PF17676 LD-carboxypeptidase C-terminal domain CYD39_RS06265 PF02016 LD-carboxypeptidase N-terminal domain CYD39_RS06270 PF01464 Transglycosylase SLT domain CYD39_RS06275 PF07317 Flagellar regulator YcgR CYD39_RS06275 PF07238 PilZ domain CYD39_RS06280 PF04226 Transglycosylase associated protein CYD39_RS06285 PF01204 Trehalase CYD39_RS06290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYD39_RS06290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYD39_RS06295 PF08173 Membrane bound YbgT-like protein CYD39_RS06300 PF02322 Cytochrome bd terminal oxidase subunit II CYD39_RS06305 PF01654 Cytochrome bd terminal oxidase subunit I CYD39_RS06310 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CYD39_RS06315 PF07449 Hydrogenase-1 expression protein HyaE CYD39_RS06320 PF01750 Hydrogenase maturation protease CYD39_RS06325 PF01292 Prokaryotic cytochrome b561 CYD39_RS06330 PF00374 Nickel-dependent hydrogenase CYD39_RS06335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYD39_RS06335 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CYD39_RS06355 PF06071 Protein of unknown function (DUF933) CYD39_RS06355 PF01926 50S ribosome-binding GTPase CYD39_RS06360 PF01195 Peptidyl-tRNA hydrolase CYD39_RS06365 PF10762 Protein of unknown function (DUF2583) CYD39_RS06370 PF00916 Sulfate permease family CYD39_RS06370 PF01740 STAS domain CYD39_RS06375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYD39_RS06375 PF14572 Phosphoribosyl synthetase-associated domain CYD39_RS06380 PF00288 GHMP kinases N terminal domain CYD39_RS06380 PF08544 GHMP kinases C terminal CYD39_RS06385 PF03550 Outer membrane lipoprotein LolB CYD39_RS06390 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYD39_RS06390 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYD39_RS06390 PF01488 Shikimate / quinate 5-dehydrogenase CYD39_RS06395 PF00472 RF-1 domain CYD39_RS06395 PF03462 PCRF domain CYD39_RS06400 PF17827 PrmC N-terminal domain CYD39_RS06400 PF13847 Methyltransferase domain CYD39_RS06405 PF04247 Invasion gene expression up-regulator, SirB CYD39_RS06410 PF13369 Transglutaminase-like superfamily CYD39_RS06415 PF00793 DAHP synthetase I family CYD39_RS06420 PF01699 Sodium/calcium exchanger protein CYD39_RS06425 PF06150 ChaB CYD39_RS06430 PF02635 DsrE/DsrF-like family CYD39_RS06435 PF11924 Inverse autotransporter, beta-domain CYD39_RS06440 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS06440 PF00072 Response regulator receiver domain CYD39_RS06445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CYD39_RS06445 PF07730 Histidine kinase CYD39_RS06445 PF00672 HAMP domain CYD39_RS06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS06450 PF07690 Major Facilitator Superfamily CYD39_RS06455 PF14710 Respiratory nitrate reductase alpha N-terminal CYD39_RS06455 PF00384 Molybdopterin oxidoreductase CYD39_RS06455 PF01568 Molydopterin dinucleotide binding domain CYD39_RS06460 PF14711 Respiratory nitrate reductase beta C-terminal CYD39_RS06460 PF13247 4Fe-4S dicluster domain CYD39_RS06465 PF02613 Nitrate reductase delta subunit CYD39_RS06470 PF02665 Nitrate reductase gamma subunit CYD39_RS06515 PF01842 ACT domain CYD39_RS06515 PF00551 Formyl transferase CYD39_RS06520 PF02810 SEC-C motif CYD39_RS06525 PF01734 Patatin-like phospholipase CYD39_RS06530 PF00072 Response regulator receiver domain CYD39_RS06535 PF00483 Nucleotidyl transferase CYD39_RS06540 PF00816 H-NS histone family CYD39_RS06545 PF00265 Thymidine kinase CYD39_RS06550 PF00171 Aldehyde dehydrogenase family CYD39_RS06550 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS06555 PF01914 MarC family integral membrane protein CYD39_RS06560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS06570 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS06575 PF00005 ABC transporter CYD39_RS06575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS06580 PF00005 ABC transporter CYD39_RS06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS06585 PF00520 Ion transport protein CYD39_RS06585 PF00027 Cyclic nucleotide-binding domain CYD39_RS06590 PF04269 Protein of unknown function, DUF440 CYD39_RS06595 PF13091 PLD-like domain CYD39_RS06595 PF13396 Phospholipase_D-nuclease N-terminal CYD39_RS06605 PF03795 YCII-related domain CYD39_RS06610 PF03544 Gram-negative bacterial TonB protein C-terminal CYD39_RS06615 PF03061 Thioesterase superfamily CYD39_RS06620 PF04279 Intracellular septation protein A CYD39_RS06630 PF03692 Putative zinc- or iron-chelating domain CYD39_RS06635 PF03922 OmpW family CYD39_RS06640 PF05067 Manganese containing catalase CYD39_RS06645 PF05974 Domain of unknown function (DUF892) CYD39_RS06650 PF05974 Domain of unknown function (DUF892) CYD39_RS06655 PF10685 Stress-induced bacterial acidophilic repeat motif CYD39_RS06660 PF00290 Tryptophan synthase alpha chain CYD39_RS06665 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS06670 PF00218 Indole-3-glycerol phosphate synthase CYD39_RS06670 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYD39_RS06675 PF02885 Glycosyl transferase family, helical bundle domain CYD39_RS06675 PF00117 Glutamine amidotransferase class-I CYD39_RS06675 PF00591 Glycosyl transferase family, a/b domain CYD39_RS06680 PF00425 chorismate binding enzyme CYD39_RS06680 PF04715 Anthranilate synthase component I, N terminal region CYD39_RS06690 PF02811 PHP domain CYD39_RS06695 PF01300 Telomere recombination CYD39_RS06700 PF00849 RNA pseudouridylate synthase CYD39_RS06700 PF01479 S4 domain CYD39_RS06705 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CYD39_RS06710 PF00106 short chain dehydrogenase CYD39_RS06715 PF01343 Peptidase family S49 CYD39_RS06715 PF08496 Peptidase family S49 N-terminal CYD39_RS06720 PF10692 Protein of unknown function (DUF2498) CYD39_RS06725 PF01131 DNA topoisomerase CYD39_RS06725 PF01751 Toprim domain CYD39_RS06725 PF08272 Topoisomerase I zinc-ribbon-like CYD39_RS06725 PF01396 Topoisomerase DNA binding C4 zinc finger CYD39_RS06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS06730 PF03466 LysR substrate binding domain CYD39_RS06745 PF00330 Aconitase family (aconitate hydratase) CYD39_RS06745 PF00694 Aconitase C-terminal domain CYD39_RS06750 PF00925 GTP cyclohydrolase II CYD39_RS06755 PF01569 PAP2 superfamily CYD39_RS06760 PF06305 Lipopolysaccharide assembly protein A domain CYD39_RS06765 PF18073 Rubredoxin metal binding domain CYD39_RS06770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYD39_RS06775 PF01253 Translation initiation factor SUI1 CYD39_RS06780 PF05433 Glycine zipper 2TM domain CYD39_RS06785 PF08220 DeoR-like helix-turn-helix domain CYD39_RS06785 PF00455 DeoR C terminal sensor domain CYD39_RS06795 PF13426 PAS domain CYD39_RS06795 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS06795 PF00563 EAL domain CYD39_RS06800 PF00773 RNB domain CYD39_RS06800 PF00575 S1 RNA binding domain CYD39_RS06800 PF08206 Ribonuclease B OB domain CYD39_RS06800 PF17876 Cold shock domain CYD39_RS06835 PF00005 ABC transporter CYD39_RS06840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS06840 PF00005 ABC transporter CYD39_RS06845 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS06845 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS06855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS06860 PF02954 Bacterial regulatory protein, Fis family CYD39_RS06860 PF00158 Sigma-54 interaction domain CYD39_RS06865 PF04012 PspA/IM30 family CYD39_RS06870 PF06667 Phage shock protein B CYD39_RS06875 PF04024 PspC domain CYD39_RS06880 PF09584 Phage shock protein PspD (Phageshock_PspD) CYD39_RS06885 PF00581 Rhodanese-like domain CYD39_RS06890 PF04317 YcjX-like family, DUF463 CYD39_RS06895 PF05128 Domain of unknown function (DUF697) CYD39_RS06900 PF18024 Helix-turn-helix domain CYD39_RS06900 PF00158 Sigma-54 interaction domain CYD39_RS06905 PF08534 Redoxin CYD39_RS06910 PF13378 Enolase C-terminal domain-like CYD39_RS06910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS06915 PF00246 Zinc carboxypeptidase CYD39_RS06920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS06930 PF03466 LysR substrate binding domain CYD39_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS06935 PF00248 Aldo/keto reductase family CYD39_RS06945 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS06960 PF06445 GyrI-like small molecule binding domain CYD39_RS06960 PF12833 Helix-turn-helix domain CYD39_RS06980 PF08534 Redoxin CYD39_RS07000 PF00924 Mechanosensitive ion channel CYD39_RS07005 PF10749 Protein of unknown function (DUF2534) CYD39_RS07010 PF00582 Universal stress protein family CYD39_RS07015 PF13545 Crp-like helix-turn-helix domain CYD39_RS07015 PF00027 Cyclic nucleotide-binding domain CYD39_RS07020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYD39_RS07020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYD39_RS07025 PF01713 Smr domain CYD39_RS07030 PF00672 HAMP domain CYD39_RS07030 PF02203 Tar ligand binding domain homologue CYD39_RS07030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS07035 PF01544 CorA-like Mg2+ transporter protein CYD39_RS07045 PF03880 DbpA RNA binding domain CYD39_RS07045 PF00271 Helicase conserved C-terminal domain CYD39_RS07045 PF00270 DEAD/DEAH box helicase CYD39_RS07050 PF01171 PP-loop family CYD39_RS07070 PF00893 Small Multidrug Resistance protein CYD39_RS07075 PF00582 Universal stress protein family CYD39_RS07080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CYD39_RS07080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CYD39_RS07080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CYD39_RS07080 PF10371 Domain of unknown function CYD39_RS07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS07090 PF03891 Domain of unknown function (DUF333) CYD39_RS07095 PF03724 META domain CYD39_RS07100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYD39_RS07100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD39_RS07105 PF11739 Dicarboxylate transport CYD39_RS07110 PF13617 YnbE-like lipoprotein CYD39_RS07115 PF07027 Protein of unknown function (DUF1318) CYD39_RS07125 PF02525 Flavodoxin-like fold CYD39_RS07130 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CYD39_RS07130 PF00271 Helicase conserved C-terminal domain CYD39_RS07130 PF04408 Helicase associated domain (HA2) CYD39_RS07130 PF11898 Domain of unknown function (DUF3418) CYD39_RS07130 PF00270 DEAD/DEAH box helicase CYD39_RS07135 PF02698 DUF218 domain CYD39_RS07140 PF01292 Prokaryotic cytochrome b561 CYD39_RS07145 PF08242 Methyltransferase domain CYD39_RS07155 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS07160 PF00005 ABC transporter CYD39_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS07170 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS07180 PF00657 GDSL-like Lipase/Acylhydrolase CYD39_RS07180 PF06767 Sif protein CYD39_RS07195 PF02583 Metal-sensitive transcriptional repressor CYD39_RS07200 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS07200 PF00107 Zinc-binding dehydrogenase CYD39_RS07205 PF02203 Tar ligand binding domain homologue CYD39_RS07205 PF00672 HAMP domain CYD39_RS07205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS07210 PF03466 LysR substrate binding domain CYD39_RS07215 PF07063 Domain of unknown function (DUF1338) CYD39_RS07220 PF00135 Carboxylesterase family CYD39_RS07225 PF04349 Periplasmic glucan biosynthesis protein, MdoG CYD39_RS07230 PF04264 YceI-like domain CYD39_RS07235 PF07729 FCD domain CYD39_RS07235 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS07240 PF00107 Zinc-binding dehydrogenase CYD39_RS07240 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS07245 PF07690 Major Facilitator Superfamily CYD39_RS07250 PF00106 short chain dehydrogenase CYD39_RS07255 PF13378 Enolase C-terminal domain-like CYD39_RS07255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS07260 PF00583 Acetyltransferase (GNAT) family CYD39_RS07265 PF08220 DeoR-like helix-turn-helix domain CYD39_RS07265 PF00455 DeoR C terminal sensor domain CYD39_RS07270 PF00834 Ribulose-phosphate 3 epimerase family CYD39_RS07275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS07280 PF03437 BtpA family CYD39_RS07285 PF03611 PTS system sugar-specific permease component CYD39_RS07290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS07295 PF05343 M42 glutamyl aminopeptidase CYD39_RS07300 PF13302 Acetyltransferase (GNAT) domain CYD39_RS07305 PF18836 Beta solenoid repeat from YDCK CYD39_RS07310 PF03595 Voltage-dependent anion channel CYD39_RS07315 PF03848 Tellurite resistance protein TehB CYD39_RS07320 PF11769 Protein of unknown function (DUF3313) CYD39_RS07325 PF03594 Benzoate membrane transport protein CYD39_RS07330 PF01381 Helix-turn-helix CYD39_RS07330 PF07883 Cupin domain CYD39_RS07335 PF12392 Collagenase CYD39_RS07335 PF01136 Peptidase family U32 CYD39_RS07340 PF10829 Protein of unknown function (DUF2554) CYD39_RS07345 PF06767 Sif protein CYD39_RS07360 PF01427 D-ala-D-ala dipeptidase CYD39_RS07365 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS07365 PF00155 Aminotransferase class I and II CYD39_RS07370 PF00171 Aldehyde dehydrogenase family CYD39_RS07380 PF10753 Toxin GhoT_OrtT CYD39_RS07400 PF10735 Protein of unknown function (DUF2526) CYD39_RS07405 PF04657 Putative inner membrane exporter, YdcZ CYD39_RS07415 PF00107 Zinc-binding dehydrogenase CYD39_RS07415 PF16884 N-terminal domain of oxidoreductase CYD39_RS07425 PF00593 TonB dependent receptor CYD39_RS07425 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS07435 PF06004 Bacterial protein of unknown function (DUF903) CYD39_RS07440 PF00324 Amino acid permease CYD39_RS07450 PF00797 N-acetyltransferase CYD39_RS07455 PF02567 Phenazine biosynthesis-like protein CYD39_RS07460 PF02665 Nitrate reductase gamma subunit CYD39_RS07465 PF02613 Nitrate reductase delta subunit CYD39_RS07470 PF14711 Respiratory nitrate reductase beta C-terminal CYD39_RS07470 PF13247 4Fe-4S dicluster domain CYD39_RS07475 PF00384 Molybdopterin oxidoreductase CYD39_RS07475 PF14710 Respiratory nitrate reductase alpha N-terminal CYD39_RS07475 PF01568 Molydopterin dinucleotide binding domain CYD39_RS07480 PF07690 Major Facilitator Superfamily CYD39_RS07485 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS07490 PF07690 Major Facilitator Superfamily CYD39_RS07500 PF00267 Gram-negative porin CYD39_RS07505 PF00892 EamA-like transporter family CYD39_RS07515 PF12800 4Fe-4S binding domain CYD39_RS07515 PF13247 4Fe-4S dicluster domain CYD39_RS07515 PF09163 Formate dehydrogenase N, transmembrane CYD39_RS07520 PF01292 Prokaryotic cytochrome b561 CYD39_RS07525 PF00107 Zinc-binding dehydrogenase CYD39_RS07525 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS07530 PF00390 Malic enzyme, N-terminal domain CYD39_RS07530 PF03949 Malic enzyme, NAD binding domain CYD39_RS07535 PF08136 30S ribosomal protein subunit S22 family CYD39_RS07540 PF10684 Putative biofilm-dependent modulation protein CYD39_RS07545 PF02566 OsmC-like protein CYD39_RS07550 PF06411 HdeA/HdeB family CYD39_RS07560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYD39_RS07560 PF11941 Domain of unknown function (DUF3459) CYD39_RS07560 PF00128 Alpha amylase, catalytic domain CYD39_RS07565 PF00128 Alpha amylase, catalytic domain CYD39_RS07570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYD39_RS07570 PF00128 Alpha amylase, catalytic domain CYD39_RS07575 PF00155 Aminotransferase class I and II CYD39_RS07580 PF03553 Na+/H+ antiporter family CYD39_RS07585 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS07595 PF03060 Nitronate monooxygenase CYD39_RS07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS07600 PF03466 LysR substrate binding domain CYD39_RS07645 PF01042 Endoribonuclease L-PSP CYD39_RS07650 PF02547 Queuosine biosynthesis protein CYD39_RS07660 PF01494 FAD binding domain CYD39_RS07665 PF07690 Major Facilitator Superfamily CYD39_RS07675 PF07690 Major Facilitator Superfamily CYD39_RS07680 PF00107 Zinc-binding dehydrogenase CYD39_RS07680 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS07685 PF07729 FCD domain CYD39_RS07685 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS07695 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CYD39_RS07695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYD39_RS07700 PF00374 Nickel-dependent hydrogenase CYD39_RS07705 PF01292 Prokaryotic cytochrome b561 CYD39_RS07710 PF01750 Hydrogenase maturation protease CYD39_RS07715 PF01455 HupF/HypC family CYD39_RS07725 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CYD39_RS07735 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CYD39_RS07740 PF00267 Gram-negative porin CYD39_RS07750 PF01062 Bestrophin, RFP-TM, chloride channel CYD39_RS07755 PF13811 Domain of unknown function (DUF4186) CYD39_RS07760 PF04960 Glutaminase CYD39_RS07765 PF00171 Aldehyde dehydrogenase family CYD39_RS07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS07770 PF03466 LysR substrate binding domain CYD39_RS07775 PF07690 Major Facilitator Superfamily CYD39_RS07780 PF01914 MarC family integral membrane protein CYD39_RS07785 PF01047 MarR family CYD39_RS07790 PF12833 Helix-turn-helix domain CYD39_RS07795 PF13999 MarB protein CYD39_RS07800 PF00892 EamA-like transporter family CYD39_RS07805 PF07690 Major Facilitator Superfamily CYD39_RS07815 PF04076 Bacterial OB fold (BOF) protein CYD39_RS07820 PF02464 Competence-damaged protein CYD39_RS07825 PF10685 Stress-induced bacterial acidophilic repeat motif CYD39_RS07835 PF01432 Peptidase family M3 CYD39_RS07840 PF00106 short chain dehydrogenase CYD39_RS07845 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS07845 PF07729 FCD domain CYD39_RS07850 PF14001 YdfZ protein CYD39_RS07855 PF08125 Mannitol dehydrogenase C-terminal domain CYD39_RS07855 PF01232 Mannitol dehydrogenase Rossmann domain CYD39_RS07860 PF07690 Major Facilitator Superfamily CYD39_RS07860 PF00083 Sugar (and other) transporter CYD39_RS07865 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS07865 PF00107 Zinc-binding dehydrogenase CYD39_RS07870 PF13378 Enolase C-terminal domain-like CYD39_RS07870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS07875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CYD39_RS07880 PF06932 Protein of unknown function (DUF1283) CYD39_RS07885 PF13302 Acetyltransferase (GNAT) domain CYD39_RS07890 PF06788 Uncharacterised protein family (UPF0257) CYD39_RS07895 PF06649 Protein of unknown function (DUF1161) CYD39_RS07900 PF00384 Molybdopterin oxidoreductase CYD39_RS07900 PF01568 Molydopterin dinucleotide binding domain CYD39_RS07900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS07905 PF00384 Molybdopterin oxidoreductase CYD39_RS07905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS07905 PF01568 Molydopterin dinucleotide binding domain CYD39_RS07910 PF13247 4Fe-4S dicluster domain CYD39_RS07910 PF12800 4Fe-4S binding domain CYD39_RS07915 PF04976 DMSO reductase anchor subunit (DmsC) CYD39_RS07920 PF02613 Nitrate reductase delta subunit CYD39_RS07925 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS07930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYD39_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS07940 PF00005 ABC transporter CYD39_RS07940 PF00571 CBS domain CYD39_RS07945 PF00654 Voltage gated chloride channel CYD39_RS07955 PF00480 ROK family CYD39_RS07960 PF03466 LysR substrate binding domain CYD39_RS07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS07965 PF07690 Major Facilitator Superfamily CYD39_RS07975 PF00089 Trypsin CYD39_RS07980 PF00893 Small Multidrug Resistance protein CYD39_RS07985 PF00893 Small Multidrug Resistance protein CYD39_RS07995 PF01594 AI-2E family transporter CYD39_RS08000 PF02233 NAD(P) transhydrogenase beta subunit CYD39_RS08005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYD39_RS08005 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CYD39_RS08005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYD39_RS08010 PF07338 Protein of unknown function (DUF1471) CYD39_RS08015 PF13520 Amino acid permease CYD39_RS08020 PF06942 GlpM protein CYD39_RS08025 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS08025 PF00072 Response regulator receiver domain CYD39_RS08035 PF00267 Gram-negative porin CYD39_RS08040 PF13382 Adenine deaminase C-terminal domain CYD39_RS08040 PF01979 Amidohydrolase family CYD39_RS08045 PF00672 HAMP domain CYD39_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS08045 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS08050 PF05472 DNA replication terminus site-binding protein (Ter protein) CYD39_RS08055 PF10415 Fumarase C C-terminus CYD39_RS08055 PF00206 Lyase CYD39_RS08060 PF05683 Fumarase C-terminus CYD39_RS08060 PF05681 Fumarate hydratase (Fumerase) CYD39_RS08065 PF01238 Phosphomannose isomerase type I CYD39_RS08070 PF06097 Bacterial protein of unknown function (DUF945) CYD39_RS08080 PF00155 Aminotransferase class I and II CYD39_RS08085 PF00962 Adenosine/AMP deaminase CYD39_RS08090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYD39_RS08090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS08100 PF05321 Haemolysin expression modulating protein CYD39_RS08105 PF10754 Protein of unknown function (DUF2569) CYD39_RS08110 PF02508 Rnf-Nqr subunit, membrane protein CYD39_RS08115 PF04060 Putative Fe-S cluster CYD39_RS08120 PF10531 SLBB domain CYD39_RS08120 PF13375 RnfC Barrel sandwich hybrid domain CYD39_RS08120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYD39_RS08120 PF12838 4Fe-4S dicluster domain CYD39_RS08125 PF03116 NQR2, RnfD, RnfE family CYD39_RS08130 PF04205 FMN-binding domain CYD39_RS08135 PF02508 Rnf-Nqr subunit, membrane protein CYD39_RS08140 PF00730 HhH-GPD superfamily base excision DNA repair protein CYD39_RS08140 PF10576 Iron-sulfur binding domain of endonuclease III CYD39_RS08140 PF00633 Helix-hairpin-helix motif CYD39_RS08145 PF00854 POT family CYD39_RS08150 PF00043 Glutathione S-transferase, C-terminal domain CYD39_RS08150 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS08155 PF08543 Phosphomethylpyrimidine kinase CYD39_RS08160 PF01479 S4 domain CYD39_RS08160 PF00579 tRNA synthetases class I (W and Y) CYD39_RS08165 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYD39_RS08165 PF01243 Pyridoxamine 5'-phosphate oxidase CYD39_RS08170 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CYD39_RS08175 PF03702 Anhydro-N-acetylmuramic acid kinase CYD39_RS08180 PF05433 Glycine zipper 2TM domain CYD39_RS08185 PF01047 MarR family CYD39_RS08190 PF07869 Protein of unknown function (DUF1656) CYD39_RS08195 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS08195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS08200 PF04632 Fusaric acid resistance protein family CYD39_RS08205 PF00080 Copper/zinc superoxide dismutase (SODC) CYD39_RS08210 PF00248 Aldo/keto reductase family CYD39_RS08215 PF06945 Protein of unknown function (DUF1289) CYD39_RS08220 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS08220 PF16925 Tetracyclin repressor-like, C-terminal domain CYD39_RS08225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYD39_RS08230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYD39_RS08235 PF00929 Exonuclease CYD39_RS08240 PF00462 Glutaredoxin CYD39_RS08245 PF00877 NlpC/P60 family CYD39_RS08250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYD39_RS08250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYD39_RS08260 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS08265 PF03466 LysR substrate binding domain CYD39_RS08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS08270 PF07690 Major Facilitator Superfamily CYD39_RS08280 PF00677 Lumazine binding domain CYD39_RS08285 PF01554 MatE CYD39_RS08300 PF01312 FlhB HrpN YscU SpaS Family CYD39_RS08305 PF01311 Bacterial export proteins, family 1 CYD39_RS08310 PF01313 Bacterial export proteins, family 3 CYD39_RS08315 PF00813 FliP family CYD39_RS08320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYD39_RS08335 PF18269 T3SS EscN ATPase C-terminal domain CYD39_RS08335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS08340 PF00771 FHIPEP family CYD39_RS08350 PF07201 HrpJ-like domain CYD39_RS08365 PF01514 Secretory protein of YscJ/FliF family CYD39_RS08405 PF05802 Enterobacterial EspB protein CYD39_RS08410 PF04888 Secretion system effector C (SseC) like family CYD39_RS08420 PF03433 EspA-like secreted protein CYD39_RS08440 PF03958 Bacterial type II/III secretion system short domain CYD39_RS08440 PF00263 Bacterial type II and III secretion system protein CYD39_RS08450 PF00672 HAMP domain CYD39_RS08450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYD39_RS08450 PF00072 Response regulator receiver domain CYD39_RS08450 PF01627 Hpt domain CYD39_RS08450 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS08455 PF00072 Response regulator receiver domain CYD39_RS08455 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS08460 PF13411 MerR HTH family regulatory protein CYD39_RS08465 PF08349 Protein of unknown function (DUF1722) CYD39_RS08470 PF10965 Protein of unknown function (DUF2767) CYD39_RS08475 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS08475 PF00072 Response regulator receiver domain CYD39_RS08480 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS08485 PF13247 4Fe-4S dicluster domain CYD39_RS08490 PF03916 Polysulphide reductase, NrfD CYD39_RS08495 PF00384 Molybdopterin oxidoreductase CYD39_RS08495 PF01568 Molydopterin dinucleotide binding domain CYD39_RS08495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS08500 PF00294 pfkB family carbohydrate kinase CYD39_RS08510 PF00561 alpha/beta hydrolase fold CYD39_RS08515 PF00324 Amino acid permease CYD39_RS08520 PF00224 Pyruvate kinase, barrel domain CYD39_RS08520 PF02887 Pyruvate kinase, alpha/beta domain CYD39_RS08525 PF04728 Lipoprotein leucine-zipper CYD39_RS08530 PF04728 Lipoprotein leucine-zipper CYD39_RS08535 PF03734 L,D-transpeptidase catalytic domain CYD39_RS08535 PF17969 L,D-transpeptidase C-terminal domain CYD39_RS08535 PF01476 LysM domain CYD39_RS08540 PF02657 Fe-S metabolism associated domain CYD39_RS08545 PF00266 Aminotransferase class-V CYD39_RS08550 PF01458 Uncharacterized protein family (UPF0051) CYD39_RS08555 PF00005 ABC transporter CYD39_RS08560 PF01458 Uncharacterized protein family (UPF0051) CYD39_RS08565 PF01521 Iron-sulphur cluster biosynthesis CYD39_RS08570 PF00375 Sodium:dicarboxylate symporter family CYD39_RS08575 PF15930 Domain of unknown function CYD39_RS08580 PF03061 Thioesterase superfamily CYD39_RS08585 PF01565 FAD binding domain CYD39_RS08585 PF13183 4Fe-4S dicluster domain CYD39_RS08585 PF02913 FAD linked oxidases, C-terminal domain CYD39_RS08590 PF01594 AI-2E family transporter CYD39_RS08600 PF08965 Domain of unknown function (DUF1870) CYD39_RS08605 PF07690 Major Facilitator Superfamily CYD39_RS08610 PF07690 Major Facilitator Superfamily CYD39_RS08615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYD39_RS08615 PF08501 Shikimate dehydrogenase substrate binding domain CYD39_RS08620 PF01487 Type I 3-dehydroquinase CYD39_RS08625 PF01144 Coenzyme A transferase CYD39_RS08630 PF02770 Acyl-CoA dehydrogenase, middle domain CYD39_RS08630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYD39_RS08630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYD39_RS08635 PF12833 Helix-turn-helix domain CYD39_RS08635 PF02311 AraC-like ligand binding domain CYD39_RS08640 PF01012 Electron transfer flavoprotein domain CYD39_RS08645 PF00766 Electron transfer flavoprotein FAD-binding domain CYD39_RS08645 PF01012 Electron transfer flavoprotein domain CYD39_RS08650 PF01494 FAD binding domain CYD39_RS08660 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS08660 PF00501 AMP-binding enzyme CYD39_RS08665 PF00391 PEP-utilising enzyme, mobile domain CYD39_RS08665 PF02896 PEP-utilising enzyme, TIM barrel domain CYD39_RS08665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYD39_RS08670 PF03618 Kinase/pyrophosphorylase CYD39_RS08675 PF00793 DAHP synthetase I family CYD39_RS08680 PF10636 Hemin uptake protein hemP CYD39_RS08685 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CYD39_RS08690 PF00563 EAL domain CYD39_RS08695 PF00877 NlpC/P60 family CYD39_RS08700 PF00005 ABC transporter CYD39_RS08705 PF00255 Glutathione peroxidase CYD39_RS08710 PF01032 FecCD transport family CYD39_RS08715 PF00216 Bacterial DNA-binding protein CYD39_RS08720 PF03483 B3/4 domain CYD39_RS08720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYD39_RS08720 PF03147 Ferredoxin-fold anticodon binding domain CYD39_RS08720 PF01588 Putative tRNA binding domain CYD39_RS08720 PF03484 tRNA synthetase B5 domain CYD39_RS08725 PF01409 tRNA synthetases class II core domain (F) CYD39_RS08725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYD39_RS08735 PF00453 Ribosomal protein L20 CYD39_RS08740 PF01632 Ribosomal protein L35 CYD39_RS08745 PF05198 Translation initiation factor IF-3, N-terminal domain CYD39_RS08745 PF00707 Translation initiation factor IF-3, C-terminal domain CYD39_RS08750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYD39_RS08750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYD39_RS08750 PF02824 TGS domain CYD39_RS08750 PF03129 Anticodon binding domain CYD39_RS08770 PF01223 DNA/RNA non-specific endonuclease CYD39_RS08785 PF04338 Protein of unknown function, DUF481 CYD39_RS08790 PF00294 pfkB family carbohydrate kinase CYD39_RS08795 PF11080 Endoribonuclease GhoS CYD39_RS08800 PF03881 Fructosamine kinase CYD39_RS08805 PF14002 YniB-like protein CYD39_RS08810 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS08815 PF04307 LexA-binding, inner membrane-associated putative hydrolase CYD39_RS08820 PF00375 Sodium:dicarboxylate symporter family CYD39_RS08825 PF10729 Cell division activator CedA CYD39_RS08830 PF00199 Catalase CYD39_RS08830 PF06628 Catalase-related immune-responsive CYD39_RS08830 PF18011 C-terminal domain found in long catalases CYD39_RS08835 PF04794 YdjC-like protein CYD39_RS08840 PF02056 Family 4 glycosyl hydrolase CYD39_RS08840 PF11975 Family 4 glycosyl hydrolase C-terminal domain CYD39_RS08845 PF12833 Helix-turn-helix domain CYD39_RS08845 PF07883 Cupin domain CYD39_RS08850 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYD39_RS08855 PF02378 Phosphotransferase system, EIIC CYD39_RS08860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS08865 PF04355 SmpA / OmlA family CYD39_RS08870 PF02540 NAD synthase CYD39_RS08880 PF07813 LTXXQ motif family protein CYD39_RS08885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYD39_RS08890 PF04996 Succinylarginine dihydrolase CYD39_RS08895 PF00171 Aldehyde dehydrogenase family CYD39_RS08900 PF04958 Arginine N-succinyltransferase beta subunit CYD39_RS08905 PF00202 Aminotransferase class-III CYD39_RS08910 PF03372 Endonuclease/Exonuclease/phosphatase family CYD39_RS08915 PF00293 NUDIX domain CYD39_RS08920 PF07383 Protein of unknown function (DUF1496) CYD39_RS08925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYD39_RS08925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYD39_RS08930 PF01751 Toprim domain CYD39_RS08930 PF01131 DNA topoisomerase CYD39_RS08935 PF00586 AIR synthase related protein, N-terminal domain CYD39_RS08935 PF02769 AIR synthase related protein, C-terminal domain CYD39_RS08940 PF00881 Nitroreductase family CYD39_RS08945 PF01343 Peptidase family S49 CYD39_RS08950 PF17763 Glutaminase/Asparaginase C-terminal domain CYD39_RS08950 PF00710 Asparaginase, N-terminal CYD39_RS08955 PF00857 Isochorismatase family CYD39_RS08960 PF07023 Protein of unknown function (DUF1315) CYD39_RS08965 PF01641 SelR domain CYD39_RS08970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYD39_RS08970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYD39_RS08975 PF01263 Aldose 1-epimerase CYD39_RS08980 PF00248 Aldo/keto reductase family CYD39_RS08985 PF13186 Iron-sulfur cluster-binding domain CYD39_RS08985 PF04055 Radical SAM superfamily CYD39_RS08990 PF06629 MltA-interacting protein MipA CYD39_RS08995 PF08298 PrkA AAA domain CYD39_RS08995 PF06798 PrkA serine protein kinase C-terminal domain CYD39_RS09000 PF04285 Protein of unknown function (DUF444) CYD39_RS09010 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS09010 PF17155 Gammaproteobacterial periplasmic sensor domain CYD39_RS09015 PF04073 Aminoacyl-tRNA editing domain CYD39_RS09025 PF04284 Protein of unknown function (DUF441) CYD39_RS09030 PF12833 Helix-turn-helix domain CYD39_RS09030 PF02311 AraC-like ligand binding domain CYD39_RS09035 PF07690 Major Facilitator Superfamily CYD39_RS09040 PF04343 Protein of unknown function, DUF488 CYD39_RS09050 PF03891 Domain of unknown function (DUF333) CYD39_RS09060 PF04226 Transglycosylase associated protein CYD39_RS09070 PF08956 Domain of unknown function (DUF1869) CYD39_RS09075 PF09313 Domain of unknown function (DUF1971) CYD39_RS09080 PF01810 LysE type translocator CYD39_RS09085 PF01817 Chorismate mutase type II CYD39_RS09095 PF00376 MerR family regulatory protein CYD39_RS09095 PF09278 MerR, DNA binding CYD39_RS09105 PF01909 Nucleotidyltransferase domain CYD39_RS09105 PF13427 Domain of unknown function (DUF4111) CYD39_RS09110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CYD39_RS09125 PF00924 Mechanosensitive ion channel CYD39_RS09130 PF00005 ABC transporter CYD39_RS09135 PF00005 ABC transporter CYD39_RS09140 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS09140 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS09150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS09160 PF01292 Prokaryotic cytochrome b561 CYD39_RS09170 PF00011 Hsp20/alpha crystallin family CYD39_RS09200 PF06316 Enterobacterial Ail/Lom protein CYD39_RS09220 PF00313 'Cold-shock' DNA-binding domain CYD39_RS09225 PF00652 Ricin-type beta-trefoil lectin domain CYD39_RS09230 PF06183 DinI-like family CYD39_RS09260 PF00180 Isocitrate/isopropylmalate dehydrogenase CYD39_RS09265 PF00849 RNA pseudouridylate synthase CYD39_RS09275 PF00293 NUDIX domain CYD39_RS09285 PF04356 Protein of unknown function (DUF489) CYD39_RS09290 PF08328 Adenylosuccinate lyase C-terminal CYD39_RS09290 PF00206 Lyase CYD39_RS09295 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS09295 PF00072 Response regulator receiver domain CYD39_RS09300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS09300 PF08918 PhoQ Sensor CYD39_RS09305 PF08007 Cupin superfamily protein CYD39_RS09315 PF07687 Peptidase dimerisation domain CYD39_RS09315 PF01546 Peptidase family M20/M25/M40 CYD39_RS09320 PF08402 TOBE domain CYD39_RS09320 PF00005 ABC transporter CYD39_RS09325 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS09330 PF06767 Sif protein CYD39_RS09335 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS09340 PF13416 Bacterial extracellular solute-binding protein CYD39_RS09345 PF02146 Sir2 family CYD39_RS09350 PF00480 ROK family CYD39_RS09355 PF12704 MacB-like periplasmic core domain CYD39_RS09355 PF02687 FtsX-like permease family CYD39_RS09360 PF00005 ABC transporter CYD39_RS09365 PF02687 FtsX-like permease family CYD39_RS09365 PF12704 MacB-like periplasmic core domain CYD39_RS09370 PF02559 CarD-like/TRCF domain CYD39_RS09370 PF00270 DEAD/DEAH box helicase CYD39_RS09370 PF03461 TRCF domain CYD39_RS09370 PF17757 UvrB interaction domain CYD39_RS09370 PF00271 Helicase conserved C-terminal domain CYD39_RS09375 PF03734 L,D-transpeptidase catalytic domain CYD39_RS09375 PF01476 LysM domain CYD39_RS09375 PF17969 L,D-transpeptidase C-terminal domain CYD39_RS09380 PF07338 Protein of unknown function (DUF1471) CYD39_RS09385 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS09390 PF05433 Glycine zipper 2TM domain CYD39_RS09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS09400 PF05728 Uncharacterised protein family (UPF0227) CYD39_RS09405 PF00933 Glycosyl hydrolase family 3 N terminal domain CYD39_RS09410 PF01636 Phosphotransferase enzyme family CYD39_RS09415 PF13036 Peptidoglycan-synthase activator LpoB CYD39_RS09420 PF07233 Protein of unknown function (DUF1425) CYD39_RS09425 PF01230 HIT domain CYD39_RS09430 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS09430 PF00593 TonB dependent receptor CYD39_RS09435 PF02378 Phosphotransferase system, EIIC CYD39_RS09435 PF00367 phosphotransferase system, EIIB CYD39_RS09440 PF01026 TatD related DNase CYD39_RS09445 PF09115 DNA polymerase III, delta subunit, C terminal CYD39_RS09450 PF02223 Thymidylate kinase CYD39_RS09455 PF02618 YceG-like family CYD39_RS09460 PF01063 Amino-transferase class IV CYD39_RS09465 PF02801 Beta-ketoacyl synthase, C-terminal domain CYD39_RS09465 PF00109 Beta-ketoacyl synthase, N-terminal domain CYD39_RS09470 PF00550 Phosphopantetheine attachment site CYD39_RS09480 PF00698 Acyl transferase domain CYD39_RS09485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYD39_RS09485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYD39_RS09490 PF02504 Fatty acid synthesis protein CYD39_RS09495 PF01783 Ribosomal L32p protein family CYD39_RS09500 PF02620 Large ribosomal RNA subunit accumulation protein YceD CYD39_RS09505 PF02545 Maf-like protein CYD39_RS09520 PF00849 RNA pseudouridylate synthase CYD39_RS09520 PF01479 S4 domain CYD39_RS09525 PF10150 Ribonuclease E/G family CYD39_RS09525 PF12111 Polyribonucleotide phosphorylase C terminal CYD39_RS09525 PF00575 S1 RNA binding domain CYD39_RS09530 PF00669 Bacterial flagellin N-terminal helical region CYD39_RS09535 PF00460 Flagella basal body rod protein CYD39_RS09535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYD39_RS09540 PF10135 Rod binding protein CYD39_RS09540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYD39_RS09545 PF02119 Flagellar P-ring protein CYD39_RS09550 PF02107 Flagellar L-ring protein CYD39_RS09555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYD39_RS09555 PF00460 Flagella basal body rod protein CYD39_RS09560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYD39_RS09560 PF00460 Flagella basal body rod protein CYD39_RS09565 PF00460 Flagella basal body rod protein CYD39_RS09565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYD39_RS09565 PF07559 Flagellar basal body protein FlaE CYD39_RS09570 PF13861 FlgD Tudor-like domain CYD39_RS09570 PF13860 FlgD Ig-like domain CYD39_RS09570 PF03963 Flagellar hook capping protein - N-terminal region CYD39_RS09575 PF00460 Flagella basal body rod protein CYD39_RS09575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYD39_RS09580 PF00460 Flagella basal body rod protein CYD39_RS09585 PF13144 Chaperone for flagella basal body P-ring formation CYD39_RS09590 PF04316 Anti-sigma-28 factor, FlgM CYD39_RS09595 PF05130 FlgN protein CYD39_RS09600 PF03023 Lipid II flippase MurJ CYD39_RS09605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS09610 PF04337 Protein of unknown function, DUF480 CYD39_RS09615 PF13302 Acetyltransferase (GNAT) domain CYD39_RS09620 PF07690 Major Facilitator Superfamily CYD39_RS09625 PF13417 Glutathione S-transferase, N-terminal domain CYD39_RS09625 PF04399 Glutaredoxin 2, C terminal domain CYD39_RS09630 PF07273 Protein of unknown function (DUF1439) CYD39_RS09635 PF01979 Amidohydrolase family CYD39_RS09640 PF06183 DinI-like family CYD39_RS09645 PF13991 BssS protein family CYD39_RS09650 PF01266 FAD dependent oxidoreductase CYD39_RS09655 PF10968 Protein of unknown function (DUF2770) CYD39_RS09660 PF01292 Prokaryotic cytochrome b561 CYD39_RS09665 PF04264 YceI-like domain CYD39_RS09670 PF17773 UPF0176 acylphosphatase like domain CYD39_RS09670 PF00581 Rhodanese-like domain CYD39_RS09670 PF12368 Rhodanase C-terminal CYD39_RS09675 PF03279 Bacterial lipid A biosynthesis acyltransferase CYD39_RS09680 PF07690 Major Facilitator Superfamily CYD39_RS09685 PF13984 MsyB protein CYD39_RS09690 PF07119 Protein of unknown function (DUF1375) CYD39_RS09695 PF00535 Glycosyl transferase family 2 CYD39_RS09700 PF04349 Periplasmic glucan biosynthesis protein, MdoG CYD39_RS09705 PF01757 Acyltransferase family CYD39_RS09710 PF13091 PLD-like domain CYD39_RS09715 PF01661 Macro domain CYD39_RS09725 PF10610 Thin aggregative fimbriae synthesis protein CYD39_RS09730 PF07012 Curlin associated repeat CYD39_RS09735 PF07012 Curlin associated repeat CYD39_RS09740 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS09745 PF10627 Curli assembly protein CsgE CYD39_RS09750 PF10614 Type VIII secretion system (T8SS), CsgF protein CYD39_RS09755 PF03783 Curli production assembly/transport component CsgG CYD39_RS09760 PF06496 Protein of unknown function (DUF1097) CYD39_RS09765 PF02613 Nitrate reductase delta subunit CYD39_RS09770 PF02811 PHP domain CYD39_RS09775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYD39_RS09840 PF06167 Glucose-regulated metallo-peptidase M90 CYD39_RS09850 PF00589 Phage integrase family CYD39_RS09850 PF13356 Arm DNA-binding domain CYD39_RS09875 PF04917 Bacterial shufflon protein, N-terminal constant region CYD39_RS09975 PF00589 Phage integrase family CYD39_RS09975 PF13356 Arm DNA-binding domain CYD39_RS10000 PF00589 Phage integrase family CYD39_RS10000 PF13356 Arm DNA-binding domain CYD39_RS10045 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CYD39_RS10045 PF01048 Phosphorylase superfamily CYD39_RS10070 PF01554 MatE CYD39_RS10090 PF02374 Anion-transporting ATPase CYD39_RS10095 PF06953 Arsenical resistance operon trans-acting repressor ArsD CYD39_RS10100 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYD39_RS10105 PF01022 Bacterial regulatory protein, arsR family CYD39_RS10115 PF03466 LysR substrate binding domain CYD39_RS10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS10120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYD39_RS10120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYD39_RS10125 PF00892 EamA-like transporter family CYD39_RS10135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS10135 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS10150 PF17969 L,D-transpeptidase C-terminal domain CYD39_RS10150 PF03734 L,D-transpeptidase catalytic domain CYD39_RS10155 PF02277 Phosphoribosyltransferase CYD39_RS10160 PF02654 Cobalamin-5-phosphate synthase CYD39_RS10165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CYD39_RS10170 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYD39_RS10175 PF00005 ABC transporter CYD39_RS10180 PF02361 Cobalt transport protein CYD39_RS10185 PF02553 Cobalt transport protein component CbiN CYD39_RS10190 PF01891 Cobalt uptake substrate-specific transmembrane region CYD39_RS10195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS10200 PF06180 Cobalt chelatase (CbiK) CYD39_RS10205 PF02571 Precorrin-6x reductase CbiJ/CobK CYD39_RS10210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS10215 PF11761 Cobalamin biosynthesis central region CYD39_RS10215 PF01890 Cobalamin synthesis G C-terminus CYD39_RS10215 PF11760 Cobalamin synthesis G N-terminal CYD39_RS10220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS10225 PF05175 Methyltransferase small domain CYD39_RS10230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS10235 PF01888 CbiD CYD39_RS10240 PF02570 Precorrin-8X methylmutase CYD39_RS10245 PF03186 CobD/Cbib protein CYD39_RS10250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYD39_RS10250 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYD39_RS10255 PF10114 Sensory domain found in PocR CYD39_RS10255 PF12833 Helix-turn-helix domain CYD39_RS10260 PF00230 Major intrinsic protein CYD39_RS10265 PF00936 BMC domain CYD39_RS10270 PF00936 BMC domain CYD39_RS10275 PF02286 Dehydratase large subunit CYD39_RS10280 PF02288 Dehydratase medium subunit CYD39_RS10285 PF02287 Dehydratase small subunit CYD39_RS10290 PF08841 Diol dehydratase reactivase ATPase-like domain CYD39_RS10290 PF18427 DD-reactivating factor swiveling domain CYD39_RS10300 PF00936 BMC domain CYD39_RS10305 PF00936 BMC domain CYD39_RS10310 PF06130 Phosphate propanoyltransferase CYD39_RS10320 PF03319 Ethanolamine utilisation protein EutN/carboxysome CYD39_RS10325 PF01923 Cobalamin adenosyltransferase CYD39_RS10330 PF00171 Aldehyde dehydrogenase family CYD39_RS10335 PF00171 Aldehyde dehydrogenase family CYD39_RS10335 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS10340 PF13237 4Fe-4S dicluster domain CYD39_RS10340 PF10531 SLBB domain CYD39_RS10340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYD39_RS10340 PF13375 RnfC Barrel sandwich hybrid domain CYD39_RS10350 PF00936 BMC domain CYD39_RS10355 PF10662 Ethanolamine utilisation - propanediol utilisation CYD39_RS10360 PF00871 Acetokinase family CYD39_RS10365 PF00288 GHMP kinases N terminal domain CYD39_RS10370 PF04363 Protein of unknown function (DUF496) CYD39_RS10375 PF04632 Fusaric acid resistance protein family CYD39_RS10380 PF06445 GyrI-like small molecule binding domain CYD39_RS10385 PF07943 Penicillin-binding protein 5, C-terminal domain CYD39_RS10385 PF00768 D-alanyl-D-alanine carboxypeptidase CYD39_RS10390 PF01292 Prokaryotic cytochrome b561 CYD39_RS10395 PF12800 4Fe-4S binding domain CYD39_RS10395 PF13247 4Fe-4S dicluster domain CYD39_RS10400 PF01568 Molydopterin dinucleotide binding domain CYD39_RS10400 PF00384 Molybdopterin oxidoreductase CYD39_RS10400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS10410 PF13981 SopA-like central domain CYD39_RS10410 PF13979 SopA-like catalytic domain CYD39_RS10415 PF08411 Exonuclease C-terminal CYD39_RS10415 PF00929 Exonuclease CYD39_RS10420 PF13520 Amino acid permease CYD39_RS10430 PF03466 LysR substrate binding domain CYD39_RS10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS10435 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS10445 PF08029 HisG, C-terminal domain CYD39_RS10445 PF01634 ATP phosphoribosyltransferase CYD39_RS10450 PF00815 Histidinol dehydrogenase CYD39_RS10455 PF00155 Aminotransferase class I and II CYD39_RS10460 PF00475 Imidazoleglycerol-phosphate dehydratase CYD39_RS10465 PF00117 Glutamine amidotransferase class-I CYD39_RS10470 PF00977 Histidine biosynthesis protein CYD39_RS10475 PF00977 Histidine biosynthesis protein CYD39_RS10480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYD39_RS10480 PF01502 Phosphoribosyl-AMP cyclohydrolase CYD39_RS10485 PF02706 Chain length determinant protein CYD39_RS10490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYD39_RS10490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYD39_RS10495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYD39_RS10495 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYD39_RS10500 PF02397 Bacterial sugar transferase CYD39_RS10505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYD39_RS10505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYD39_RS10505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYD39_RS10505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYD39_RS10510 PF00483 Nucleotidyl transferase CYD39_RS10510 PF01050 Mannose-6-phosphate isomerase CYD39_RS10515 PF00535 Glycosyl transferase family 2 CYD39_RS10520 PF13439 Glycosyltransferase Family 4 CYD39_RS10520 PF00534 Glycosyl transferases group 1 CYD39_RS10525 PF00535 Glycosyl transferase family 2 CYD39_RS10535 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS10540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYD39_RS10545 PF16363 GDP-mannose 4,6 dehydratase CYD39_RS10550 PF00483 Nucleotidyl transferase CYD39_RS10555 PF00111 2Fe-2S iron-sulfur cluster binding domain CYD39_RS10555 PF00175 Oxidoreductase NAD-binding domain CYD39_RS10555 PF00970 Oxidoreductase FAD-binding domain CYD39_RS10560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYD39_RS10565 PF00483 Nucleotidyl transferase CYD39_RS10570 PF04321 RmlD substrate binding domain CYD39_RS10575 PF16363 GDP-mannose 4,6 dehydratase CYD39_RS10580 PF00483 Nucleotidyl transferase CYD39_RS10590 PF00534 Glycosyl transferases group 1 CYD39_RS10590 PF13439 Glycosyltransferase Family 4 CYD39_RS10595 PF04230 Polysaccharide pyruvyl transferase CYD39_RS10605 PF02397 Bacterial sugar transferase CYD39_RS10610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYD39_RS10610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYD39_RS10610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYD39_RS10610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYD39_RS10615 PF00483 Nucleotidyl transferase CYD39_RS10615 PF01050 Mannose-6-phosphate isomerase CYD39_RS10620 PF13579 Glycosyl transferase 4-like domain CYD39_RS10620 PF00534 Glycosyl transferases group 1 CYD39_RS10625 PF00293 NUDIX domain CYD39_RS10630 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS10635 PF16363 GDP-mannose 4,6 dehydratase CYD39_RS10640 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS10645 PF00535 Glycosyl transferase family 2 CYD39_RS10655 PF13439 Glycosyltransferase Family 4 CYD39_RS10655 PF00534 Glycosyl transferases group 1 CYD39_RS10660 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS10665 PF00535 Glycosyl transferase family 2 CYD39_RS10670 PF13614 AAA domain CYD39_RS10670 PF13807 G-rich domain on putative tyrosine kinase CYD39_RS10670 PF02706 Chain length determinant protein CYD39_RS10675 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYD39_RS10680 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CYD39_RS10680 PF10531 SLBB domain CYD39_RS10680 PF02563 Polysaccharide biosynthesis/export protein CYD39_RS10685 PF00571 CBS domain CYD39_RS10685 PF03741 Integral membrane protein TerC family CYD39_RS10685 PF03471 Transporter associated domain CYD39_RS10690 PF05170 AsmA family CYD39_RS10695 PF00692 dUTPase CYD39_RS10700 PF00485 Phosphoribulokinase / Uridine kinase family CYD39_RS10705 PF08448 PAS fold CYD39_RS10705 PF13426 PAS domain CYD39_RS10705 PF08447 PAS fold CYD39_RS10705 PF05231 MASE1 CYD39_RS10705 PF00563 EAL domain CYD39_RS10705 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS10710 PF06029 AlkA N-terminal domain CYD39_RS10710 PF00730 HhH-GPD superfamily base excision DNA repair protein CYD39_RS10715 PF00012 Hsp70 protein CYD39_RS10725 PF13533 Biotin-lipoyl like CYD39_RS10730 PF00873 AcrB/AcrD/AcrF family CYD39_RS10735 PF00873 AcrB/AcrD/AcrF family CYD39_RS10740 PF07690 Major Facilitator Superfamily CYD39_RS10745 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS10745 PF00672 HAMP domain CYD39_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS10750 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS10750 PF00072 Response regulator receiver domain CYD39_RS10810 PF07262 CDI immunity protein CYD39_RS10840 PF16325 Peptidase family U32 C-terminal domain CYD39_RS10840 PF01136 Peptidase family U32 CYD39_RS10850 PF05932 Tir chaperone protein (CesT) family CYD39_RS10860 PF00781 Diacylglycerol kinase catalytic domain CYD39_RS10865 PF01791 DeoC/LacD family aldolase CYD39_RS10870 PF03825 Nucleoside H+ symporter CYD39_RS10875 PF03747 ADP-ribosylglycohydrolase CYD39_RS10880 PF00294 pfkB family carbohydrate kinase CYD39_RS10885 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS10885 PF07702 UTRA domain CYD39_RS10890 PF08543 Phosphomethylpyrimidine kinase CYD39_RS10895 PF02110 Hydroxyethylthiazole kinase family CYD39_RS10900 PF11776 Nickel/cobalt transporter regulator CYD39_RS10905 PF00419 Fimbrial protein CYD39_RS10910 PF00577 Outer membrane usher protein CYD39_RS10910 PF13954 PapC N-terminal domain CYD39_RS10910 PF13953 PapC C-terminal domain CYD39_RS10915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS10915 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS10930 PF10609 NUBPL iron-transfer P-loop NTPase CYD39_RS10935 PF09334 tRNA synthetases class I (M) CYD39_RS10935 PF01588 Putative tRNA binding domain CYD39_RS10940 PF06998 Protein of unknown function (DUF1307) CYD39_RS10950 PF07308 Protein of unknown function (DUF1456) CYD39_RS10955 PF04397 LytTr DNA-binding domain CYD39_RS10955 PF00072 Response regulator receiver domain CYD39_RS10960 PF07694 5TMR of 5TMR-LYT CYD39_RS10960 PF06580 Histidine kinase CYD39_RS10965 PF13411 MerR HTH family regulatory protein CYD39_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS10980 PF00005 ABC transporter CYD39_RS10985 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS10990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYD39_RS10995 PF00933 Glycosyl hydrolase family 3 N terminal domain CYD39_RS10995 PF14310 Fibronectin type III-like domain CYD39_RS10995 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYD39_RS11000 PF09330 D-lactate dehydrogenase, membrane binding CYD39_RS11000 PF01565 FAD binding domain CYD39_RS11005 PF00768 D-alanyl-D-alanine carboxypeptidase CYD39_RS11010 PF04893 Yip1 domain CYD39_RS11015 PF09335 SNARE associated Golgi protein CYD39_RS11025 PF02321 Outer membrane efflux protein CYD39_RS11035 PF01207 Dihydrouridine synthase (Dus) CYD39_RS11040 PF01494 FAD binding domain CYD39_RS11045 PF14497 Glutathione S-transferase, C-terminal domain CYD39_RS11045 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS11050 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYD39_RS11055 PF07883 Cupin domain CYD39_RS11060 PF07690 Major Facilitator Superfamily CYD39_RS11065 PF03466 LysR substrate binding domain CYD39_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS11070 PF03788 LrgA family CYD39_RS11075 PF04172 LrgB-like family CYD39_RS11080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYD39_RS11080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CYD39_RS11085 PF02698 DUF218 domain CYD39_RS11090 PF10808 Protein of unknown function (DUF2542) CYD39_RS11095 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS11095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYD39_RS11100 PF01180 Dihydroorotate dehydrogenase CYD39_RS11105 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS11110 PF00005 ABC transporter CYD39_RS11120 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS11125 PF04235 Protein of unknown function (DUF418) CYD39_RS11130 PF01227 GTP cyclohydrolase I CYD39_RS11135 PF00756 Putative esterase CYD39_RS11145 PF03315 Serine dehydratase beta chain CYD39_RS11145 PF03313 Serine dehydratase alpha chain CYD39_RS11150 PF18429 Domain of unknown function (DUF5609) CYD39_RS11155 PF07690 Major Facilitator Superfamily CYD39_RS11160 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS11160 PF00593 TonB dependent receptor CYD39_RS11165 PF00324 Amino acid permease CYD39_RS11170 PF03466 LysR substrate binding domain CYD39_RS11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS11175 PF03601 Conserved hypothetical protein 698 CYD39_RS11180 PF01261 Xylose isomerase-like TIM barrel CYD39_RS11185 PF02378 Phosphotransferase system, EIIC CYD39_RS11185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS11190 PF00294 pfkB family carbohydrate kinase CYD39_RS11195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS11195 PF00381 PTS HPr component phosphorylation site CYD39_RS11200 PF07690 Major Facilitator Superfamily CYD39_RS11215 PF03692 Putative zinc- or iron-chelating domain CYD39_RS11220 PF01132 Elongation factor P (EF-P) OB domain CYD39_RS11220 PF08207 Elongation factor P (EF-P) KOW-like domain CYD39_RS11220 PF09285 Elongation factor P, C-terminal CYD39_RS11225 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYD39_RS11225 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYD39_RS11230 PF01569 PAP2 superfamily CYD39_RS11235 PF00877 NlpC/P60 family CYD39_RS11240 PF00563 EAL domain CYD39_RS11240 PF12792 CSS motif domain associated with EAL CYD39_RS11245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS11250 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS11255 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS11255 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS11260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS11260 PF00005 ABC transporter CYD39_RS11265 PF13989 YejG-like protein CYD39_RS11270 PF07690 Major Facilitator Superfamily CYD39_RS11275 PF00849 RNA pseudouridylate synthase CYD39_RS11275 PF01479 S4 domain CYD39_RS11280 PF00271 Helicase conserved C-terminal domain CYD39_RS11280 PF04851 Type III restriction enzyme, res subunit CYD39_RS11285 PF01386 Ribosomal L25p family CYD39_RS11295 PF04245 37-kD nucleoid-associated bacterial protein CYD39_RS11300 PF07208 Protein of unknown function (DUF1414) CYD39_RS11305 PF00884 Sulfatase CYD39_RS11305 PF11893 Domain of unknown function (DUF3413) CYD39_RS11330 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS11330 PF00072 Response regulator receiver domain CYD39_RS11335 PF03918 Cytochrome C biogenesis protein CYD39_RS11340 PF08534 Redoxin CYD39_RS11345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CYD39_RS11345 PF01578 Cytochrome C assembly protein CYD39_RS11350 PF03100 CcmE CYD39_RS11355 PF04995 Heme exporter protein D (CcmD) CYD39_RS11360 PF01578 Cytochrome C assembly protein CYD39_RS11365 PF03379 CcmB protein CYD39_RS11370 PF00005 ABC transporter CYD39_RS11375 PF03264 NapC/NirT cytochrome c family, N-terminal region CYD39_RS11380 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CYD39_RS11385 PF12801 4Fe-4S binding domain CYD39_RS11385 PF13237 4Fe-4S dicluster domain CYD39_RS11390 PF12800 4Fe-4S binding domain CYD39_RS11390 PF12838 4Fe-4S dicluster domain CYD39_RS11395 PF01568 Molydopterin dinucleotide binding domain CYD39_RS11395 PF00384 Molybdopterin oxidoreductase CYD39_RS11395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS11400 PF03927 NapD protein CYD39_RS11405 PF13187 4Fe-4S dicluster domain CYD39_RS11405 PF12800 4Fe-4S binding domain CYD39_RS11405 PF00037 4Fe-4S binding domain CYD39_RS11410 PF03974 Ecotin CYD39_RS11415 PF00005 ABC transporter CYD39_RS11420 PF13532 2OG-Fe(II) oxygenase superfamily CYD39_RS11425 PF12833 Helix-turn-helix domain CYD39_RS11425 PF02805 Metal binding domain of Ada CYD39_RS11425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYD39_RS11425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYD39_RS11430 PF02424 ApbE family CYD39_RS11435 PF00267 Gram-negative porin CYD39_RS11440 PF16359 RcsD-ABL domain CYD39_RS11440 PF01627 Hpt domain CYD39_RS11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS11445 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS11445 PF00072 Response regulator receiver domain CYD39_RS11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS11450 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS11450 PF09456 RcsC Alpha-Beta-Loop (ABL) CYD39_RS11450 PF00072 Response regulator receiver domain CYD39_RS11455 PF00521 DNA gyrase/topoisomerase IV, subunit A CYD39_RS11455 PF03989 DNA gyrase C-terminal domain, beta-propeller CYD39_RS11460 PF13378 Enolase C-terminal domain-like CYD39_RS11460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS11465 PF07690 Major Facilitator Superfamily CYD39_RS11480 PF03477 ATP cone domain CYD39_RS11480 PF02867 Ribonucleotide reductase, barrel domain CYD39_RS11480 PF00317 Ribonucleotide reductase, all-alpha domain CYD39_RS11485 PF00268 Ribonucleotide reductase, small chain CYD39_RS11490 PF00111 2Fe-2S iron-sulfur cluster binding domain CYD39_RS11495 PF07690 Major Facilitator Superfamily CYD39_RS11500 PF03466 LysR substrate binding domain CYD39_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS11505 PF03009 Glycerophosphoryl diester phosphodiesterase family CYD39_RS11510 PF07690 Major Facilitator Superfamily CYD39_RS11515 PF01266 FAD dependent oxidoreductase CYD39_RS11515 PF04324 BFD-like [2Fe-2S] binding domain CYD39_RS11520 PF00890 FAD binding domain CYD39_RS11525 PF02754 Cysteine-rich domain CYD39_RS11525 PF13183 4Fe-4S dicluster domain CYD39_RS11535 PF00994 Probable molybdopterin binding domain CYD39_RS11540 PF03328 HpcH/HpaI aldolase/citrate lyase family CYD39_RS11545 PF07690 Major Facilitator Superfamily CYD39_RS11550 PF13378 Enolase C-terminal domain-like CYD39_RS11550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS11555 PF01614 Bacterial transcriptional regulator CYD39_RS11555 PF09339 IclR helix-turn-helix domain CYD39_RS11560 PF00994 Probable molybdopterin binding domain CYD39_RS11565 PF07437 YfaZ precursor CYD39_RS11570 PF00293 NUDIX domain CYD39_RS11575 PF00300 Histidine phosphatase superfamily (branch 1) CYD39_RS11580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYD39_RS11585 PF00535 Glycosyl transferase family 2 CYD39_RS11590 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS11590 PF02911 Formyl transferase, C-terminal domain CYD39_RS11590 PF00551 Formyl transferase CYD39_RS11595 PF01522 Polysaccharide deacetylase CYD39_RS11600 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CYD39_RS11605 PF00892 EamA-like transporter family CYD39_RS11620 PF00501 AMP-binding enzyme CYD39_RS11620 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS11625 PF13378 Enolase C-terminal domain-like CYD39_RS11630 PF00378 Enoyl-CoA hydratase/isomerase CYD39_RS11635 PF12697 Alpha/beta hydrolase family CYD39_RS11640 PF16582 Middle domain of thiamine pyrophosphate CYD39_RS11640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS11640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS11645 PF00425 chorismate binding enzyme CYD39_RS11650 PF05957 Bacterial protein of unknown function (DUF883) CYD39_RS11655 PF13673 Acetyltransferase (GNAT) domain CYD39_RS11660 PF12706 Beta-lactamase superfamily domain CYD39_RS11665 PF00072 Response regulator receiver domain CYD39_RS11665 PF01584 CheW-like domain CYD39_RS11670 PF12034 Domain of unknown function (DUF3520) CYD39_RS11670 PF00092 von Willebrand factor type A domain CYD39_RS11670 PF12450 von Willebrand factor CYD39_RS11675 PF03797 Autotransporter beta-domain CYD39_RS11680 PF00361 Proton-conducting membrane transporter CYD39_RS11685 PF00361 Proton-conducting membrane transporter CYD39_RS11690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYD39_RS11690 PF00361 Proton-conducting membrane transporter CYD39_RS11695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYD39_RS11700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYD39_RS11705 PF12838 4Fe-4S dicluster domain CYD39_RS11710 PF00146 NADH dehydrogenase CYD39_RS11715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS11715 PF01568 Molydopterin dinucleotide binding domain CYD39_RS11715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYD39_RS11715 PF00384 Molybdopterin oxidoreductase CYD39_RS11720 PF10531 SLBB domain CYD39_RS11720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYD39_RS11720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYD39_RS11730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYD39_RS11730 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYD39_RS11735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYD39_RS11740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYD39_RS11750 PF03466 LysR substrate binding domain CYD39_RS11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS11755 PF00155 Aminotransferase class I and II CYD39_RS11770 PF03600 Citrate transporter CYD39_RS11770 PF02080 TrkA-C domain CYD39_RS11775 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS11780 PF03887 YfbU domain CYD39_RS11785 PF04217 Protein of unknown function, DUF412 CYD39_RS11790 PF00871 Acetokinase family CYD39_RS11795 PF07085 DRTGG domain CYD39_RS11795 PF01515 Phosphate acetyl/butaryl transferase CYD39_RS11800 PF03606 C4-dicarboxylate anaerobic carrier CYD39_RS11805 PF02779 Transketolase, pyrimidine binding domain CYD39_RS11805 PF02780 Transketolase, C-terminal domain CYD39_RS11805 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYD39_RS11810 PF00456 Transketolase, thiamine diphosphate binding domain CYD39_RS11815 PF03611 PTS system sugar-specific permease component CYD39_RS11825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS11830 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS11835 PF00293 NUDIX domain CYD39_RS11840 PF12850 Calcineurin-like phosphoesterase superfamily domain CYD39_RS11845 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS11845 PF14834 Glutathione S-transferase, C-terminal domain CYD39_RS11850 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS11850 PF00043 Glutathione S-transferase, C-terminal domain CYD39_RS11855 PF08338 Domain of unknown function (DUF1731) CYD39_RS11855 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS11860 PF00005 ABC transporter CYD39_RS11865 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS11870 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS11875 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS11880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS11885 PF02441 Flavoprotein CYD39_RS11890 PF00324 Amino acid permease CYD39_RS11895 PF01168 Alanine racemase, N-terminal domain CYD39_RS11900 PF13520 Amino acid permease CYD39_RS11905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYD39_RS11905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYD39_RS11910 PF13426 PAS domain CYD39_RS11910 PF02954 Bacterial regulatory protein, Fis family CYD39_RS11910 PF00158 Sigma-54 interaction domain CYD39_RS11915 PF00156 Phosphoribosyl transferase domain CYD39_RS11920 PF02674 Colicin V production protein CYD39_RS11925 PF05036 Sporulation related domain CYD39_RS11930 PF08245 Mur ligase middle domain CYD39_RS11930 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS11935 PF17848 Acetyl-coA carboxylase zinc finger domain CYD39_RS11935 PF01039 Carboxyl transferase domain CYD39_RS11940 PF09335 SNARE associated Golgi protein CYD39_RS11945 PF01416 tRNA pseudouridine synthase CYD39_RS11950 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYD39_RS11950 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYD39_RS11955 PF11890 Domain of unknown function (DUF3410) CYD39_RS11955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD39_RS11955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYD39_RS11965 PF07690 Major Facilitator Superfamily CYD39_RS11990 PF02517 CPBP intramembrane metalloprotease CYD39_RS11995 PF00109 Beta-ketoacyl synthase, N-terminal domain CYD39_RS11995 PF02801 Beta-ketoacyl synthase, C-terminal domain CYD39_RS12000 PF01266 FAD dependent oxidoreductase CYD39_RS12000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CYD39_RS12005 PF08891 YfcL protein CYD39_RS12010 PF04315 Elongation factor P hydroxylase CYD39_RS12015 PF01925 Sulfite exporter TauE/SafE CYD39_RS12020 PF03411 Penicillin-insensitive murein endopeptidase CYD39_RS12025 PF01264 Chorismate synthase CYD39_RS12030 PF05175 Methyltransferase small domain CYD39_RS12035 PF01713 Smr domain CYD39_RS12040 PF00300 Histidine phosphatase superfamily (branch 1) CYD39_RS12045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYD39_RS12045 PF00378 Enoyl-CoA hydratase/isomerase CYD39_RS12045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYD39_RS12050 PF00108 Thiolase, N-terminal domain CYD39_RS12050 PF02803 Thiolase, C-terminal domain CYD39_RS12055 PF04175 Protein of unknown function (DUF406) CYD39_RS12060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CYD39_RS12065 PF04333 MlaA lipoprotein CYD39_RS12070 PF01226 Formate/nitrite transporter CYD39_RS12080 PF01278 Omptin family CYD39_RS12085 PF14532 Sigma-54 interaction domain CYD39_RS12085 PF00072 Response regulator receiver domain CYD39_RS12085 PF02954 Bacterial regulatory protein, Fis family CYD39_RS12090 PF00672 HAMP domain CYD39_RS12090 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS12100 PF07690 Major Facilitator Superfamily CYD39_RS12105 PF10810 Protein of unknown function (DUF2545) CYD39_RS12110 PF03279 Bacterial lipid A biosynthesis acyltransferase CYD39_RS12120 PF00155 Aminotransferase class I and II CYD39_RS12125 PF02685 Glucokinase CYD39_RS12130 PF00654 Voltage gated chloride channel CYD39_RS12135 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS12135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS12135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS12140 PF00248 Aldo/keto reductase family CYD39_RS12145 PF10697 Protein of unknown function (DUF2502) CYD39_RS12150 PF01566 Natural resistance-associated macrophage protein CYD39_RS12155 PF07662 Na+ dependent nucleoside transporter C-terminus CYD39_RS12155 PF07670 Nucleoside recognition CYD39_RS12155 PF01773 Na+ dependent nucleoside transporter N-terminus CYD39_RS12160 PF00563 EAL domain CYD39_RS12160 PF05231 MASE1 CYD39_RS12175 PF07037 Putative transcription regulator (DUF1323) CYD39_RS12180 PF07037 Putative transcription regulator (DUF1323) CYD39_RS12185 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYD39_RS12210 PF03466 LysR substrate binding domain CYD39_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS12220 PF03825 Nucleoside H+ symporter CYD39_RS12225 PF01048 Phosphorylase superfamily CYD39_RS12230 PF03502 Nucleoside-specific channel-forming protein, Tsx CYD39_RS12235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS12235 PF03466 LysR substrate binding domain CYD39_RS12240 PF13593 SBF-like CPA transporter family (DUF4137) CYD39_RS12245 PF12843 Putative quorum-sensing-regulated virulence factor CYD39_RS12250 PF00533 BRCA1 C Terminus (BRCT) domain CYD39_RS12250 PF03120 NAD-dependent DNA ligase OB-fold domain CYD39_RS12250 PF01653 NAD-dependent DNA ligase adenylation domain CYD39_RS12250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYD39_RS12250 PF12826 Helix-hairpin-helix motif CYD39_RS12255 PF04354 ZipA, C-terminal FtsZ-binding domain CYD39_RS12265 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS12270 PF00381 PTS HPr component phosphorylation site CYD39_RS12275 PF05524 PEP-utilising enzyme, N-terminal CYD39_RS12275 PF00391 PEP-utilising enzyme, mobile domain CYD39_RS12275 PF02896 PEP-utilising enzyme, TIM barrel domain CYD39_RS12280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYD39_RS12290 PF08543 Phosphomethylpyrimidine kinase CYD39_RS12295 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS12295 PF00155 Aminotransferase class I and II CYD39_RS12300 PF00117 Glutamine amidotransferase class-I CYD39_RS12305 PF17263 Family of unknown function (DUF5329) CYD39_RS12310 PF00912 Transglycosylase CYD39_RS12315 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS12320 PF00005 ABC transporter CYD39_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS12345 PF04261 Dyp-type peroxidase family CYD39_RS12350 PF06572 Protein of unknown function (DUF1131) CYD39_RS12355 PF11143 Protein of unknown function (DUF2919) CYD39_RS12360 PF00583 Acetyltransferase (GNAT) family CYD39_RS12365 PF01520 N-acetylmuramoyl-L-alanine amidase CYD39_RS12370 PF01218 Coproporphyrinogen III oxidase CYD39_RS12380 PF09234 Domain of unknown function (DUF1963) CYD39_RS12385 PF12833 Helix-turn-helix domain CYD39_RS12390 PF00936 BMC domain CYD39_RS12390 PF16365 Ethanolamine utilization protein EutK C-terminus CYD39_RS12395 PF00936 BMC domain CYD39_RS12400 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CYD39_RS12405 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CYD39_RS12410 PF06277 Ethanolamine utilisation protein EutA CYD39_RS12415 PF04346 Ethanolamine utilisation protein, EutH CYD39_RS12420 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS12430 PF00171 Aldehyde dehydrogenase family CYD39_RS12435 PF03319 Ethanolamine utilisation protein EutN/carboxysome CYD39_RS12440 PF00936 BMC domain CYD39_RS12445 PF01515 Phosphate acetyl/butaryl transferase CYD39_RS12450 PF01923 Cobalamin adenosyltransferase CYD39_RS12455 PF06249 Ethanolamine utilisation protein EutQ CYD39_RS12460 PF10662 Ethanolamine utilisation - propanediol utilisation CYD39_RS12465 PF00936 BMC domain CYD39_RS12470 PF00390 Malic enzyme, N-terminal domain CYD39_RS12470 PF03949 Malic enzyme, NAD binding domain CYD39_RS12470 PF01515 Phosphate acetyl/butaryl transferase CYD39_RS12475 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYD39_RS12480 PF00456 Transketolase, thiamine diphosphate binding domain CYD39_RS12480 PF02779 Transketolase, pyrimidine binding domain CYD39_RS12480 PF02780 Transketolase, C-terminal domain CYD39_RS12490 PF06674 Protein of unknown function (DUF1176) CYD39_RS12495 PF00293 NUDIX domain CYD39_RS12500 PF00144 Beta-lactamase CYD39_RS12505 PF13247 4Fe-4S dicluster domain CYD39_RS12505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYD39_RS12505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS12510 PF07730 Histidine kinase CYD39_RS12510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CYD39_RS12510 PF00672 HAMP domain CYD39_RS12510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS12515 PF00873 AcrB/AcrD/AcrF family CYD39_RS12525 PF03960 ArsC family CYD39_RS12530 PF01546 Peptidase family M20/M25/M40 CYD39_RS12530 PF07687 Peptidase dimerisation domain CYD39_RS12535 PF13980 Uncharacterised protein family (UPF0370) CYD39_RS12540 PF05127 Helicase CYD39_RS12540 PF13718 GNAT acetyltransferase 2 CYD39_RS12540 PF17176 tRNA-binding domain CYD39_RS12540 PF08351 Domain of unknown function (DUF1726) CYD39_RS12545 PF04228 Putative neutral zinc metallopeptidase CYD39_RS12550 PF01259 SAICAR synthetase CYD39_RS12555 PF06804 NlpB/DapX lipoprotein CYD39_RS12560 PF00701 Dihydrodipicolinate synthetase family CYD39_RS12565 PF01842 ACT domain CYD39_RS12570 PF00578 AhpC/TSA family CYD39_RS12575 PF02595 Glycerate kinase family CYD39_RS12580 PF02447 GntP family permease CYD39_RS12585 PF13556 PucR C-terminal helix-turn-helix domain CYD39_RS12585 PF05651 Putative sugar diacid recognition CYD39_RS12585 PF17853 GGDEF-like domain CYD39_RS12590 PF01594 AI-2E family transporter CYD39_RS12595 PF01435 Peptidase family M48 CYD39_RS12600 PF03960 ArsC family CYD39_RS12605 PF00308 Bacterial dnaA protein CYD39_RS12610 PF00860 Permease family CYD39_RS12625 PF02769 AIR synthase related protein, C-terminal domain CYD39_RS12625 PF00586 AIR synthase related protein, N-terminal domain CYD39_RS12630 PF00551 Formyl transferase CYD39_RS12635 PF13089 Polyphosphate kinase N-terminal domain CYD39_RS12635 PF17941 Polyphosphate kinase C-terminal domain 1 CYD39_RS12635 PF13090 Polyphosphate kinase C-terminal domain 2 CYD39_RS12635 PF02503 Polyphosphate kinase middle domain CYD39_RS12640 PF02541 Ppx/GppA phosphatase family CYD39_RS12645 PF05231 MASE1 CYD39_RS12645 PF00563 EAL domain CYD39_RS12655 PF11119 Protein of unknown function (DUF2633) CYD39_RS12675 PF07516 SecA Wing and Scaffold domain CYD39_RS12675 PF01043 SecA preprotein cross-linking domain CYD39_RS12675 PF07517 SecA DEAD-like domain CYD39_RS12675 PF02810 SEC-C motif CYD39_RS12680 PF13356 Arm DNA-binding domain CYD39_RS12680 PF00589 Phage integrase family CYD39_RS12685 PF00117 Glutamine amidotransferase class-I CYD39_RS12685 PF02540 NAD synthase CYD39_RS12685 PF00958 GMP synthase C terminal domain CYD39_RS12690 PF00478 IMP dehydrogenase / GMP reductase domain CYD39_RS12690 PF00571 CBS domain CYD39_RS12695 PF13742 OB-fold nucleic acid binding domain CYD39_RS12695 PF02601 Exonuclease VII, large subunit CYD39_RS12700 PF03797 Autotransporter beta-domain CYD39_RS12720 PF02368 Bacterial Ig-like domain (group 2) CYD39_RS12720 PF11924 Inverse autotransporter, beta-domain CYD39_RS12720 PF07979 Intimin C-type lectin domain CYD39_RS12720 PF02369 Bacterial Ig-like domain (group 1) CYD39_RS12720 PF01476 LysM domain CYD39_RS12725 PF07191 zinc-ribbons CYD39_RS12730 PF01926 50S ribosome-binding GTPase CYD39_RS12730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYD39_RS12735 PF13360 PQQ-like domain CYD39_RS12740 PF09976 Tetratricopeptide repeat-like domain CYD39_RS12745 PF03129 Anticodon binding domain CYD39_RS12745 PF13393 Histidyl-tRNA synthetase CYD39_RS12750 PF04551 GcpE protein CYD39_RS12755 PF13464 Domain of unknown function (DUF4115) CYD39_RS12760 PF04055 Radical SAM superfamily CYD39_RS12765 PF00334 Nucleoside diphosphate kinase CYD39_RS12780 PF13247 4Fe-4S dicluster domain CYD39_RS12780 PF12800 4Fe-4S binding domain CYD39_RS12785 PF01568 Molydopterin dinucleotide binding domain CYD39_RS12785 PF00384 Molybdopterin oxidoreductase CYD39_RS12785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS12790 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS12790 PF00912 Transglycosylase CYD39_RS12790 PF06832 Penicillin-Binding Protein C-terminus Family CYD39_RS12795 PF07703 Alpha-2-macroglobulin bait region domain CYD39_RS12795 PF00207 Alpha-2-macroglobulin family CYD39_RS12795 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CYD39_RS12795 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CYD39_RS12795 PF01835 MG2 domain CYD39_RS12795 PF17962 Bacterial macroglobulin domain 6 CYD39_RS12795 PF07678 A-macroglobulin TED domain CYD39_RS12795 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CYD39_RS12795 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CYD39_RS12800 PF00581 Rhodanese-like domain CYD39_RS12810 PF14581 SseB protein C-terminal domain CYD39_RS12810 PF07179 SseB protein N-terminal domain CYD39_RS12815 PF00883 Cytosol aminopeptidase family, catalytic domain CYD39_RS12815 PF12404 Peptidase CYD39_RS12820 PF04384 Iron-sulphur cluster assembly CYD39_RS12825 PF00111 2Fe-2S iron-sulfur cluster binding domain CYD39_RS12830 PF00012 Hsp70 protein CYD39_RS12835 PF07743 HSCB C-terminal oligomerisation domain CYD39_RS12840 PF01521 Iron-sulphur cluster biosynthesis CYD39_RS12845 PF01592 NifU-like N terminal domain CYD39_RS12850 PF00266 Aminotransferase class-V CYD39_RS12855 PF02082 Transcriptional regulator CYD39_RS12860 PF00588 SpoU rRNA Methylase family CYD39_RS12865 PF00459 Inositol monophosphatase family CYD39_RS12870 PF12146 Serine aminopeptidase, S33 CYD39_RS12875 PF17179 4Fe-4S dicluster domain CYD39_RS12880 PF00175 Oxidoreductase NAD-binding domain CYD39_RS12880 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CYD39_RS12885 PF13187 4Fe-4S dicluster domain CYD39_RS12885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYD39_RS12885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYD39_RS12890 PF03824 High-affinity nickel-transport protein CYD39_RS12900 PF00874 PRD domain CYD39_RS12905 PF12832 MFS_1 like family CYD39_RS12910 PF00464 Serine hydroxymethyltransferase CYD39_RS12915 PF00970 Oxidoreductase FAD-binding domain CYD39_RS12915 PF00042 Globin CYD39_RS12915 PF00175 Oxidoreductase NAD-binding domain CYD39_RS12920 PF18500 CadC C-terminal domain 1 CYD39_RS12920 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS12925 PF13520 Amino acid permease CYD39_RS12930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS12930 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYD39_RS12930 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS12935 PF00854 POT family CYD39_RS12940 PF00543 Nitrogen regulatory protein P-II CYD39_RS12945 PF00072 Response regulator receiver domain CYD39_RS12945 PF00158 Sigma-54 interaction domain CYD39_RS12950 PF13942 YfhG lipoprotein CYD39_RS12955 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS12960 PF02769 AIR synthase related protein, C-terminal domain CYD39_RS12960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYD39_RS12960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CYD39_RS12970 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS12970 PF01464 Transglycosylase SLT domain CYD39_RS12975 PF14437 MafB19-like deaminase CYD39_RS12985 PF02378 Phosphotransferase system, EIIC CYD39_RS12985 PF00367 phosphotransferase system, EIIB CYD39_RS12990 PF01380 SIS domain CYD39_RS12995 PF01380 SIS domain CYD39_RS12995 PF01418 Helix-turn-helix domain, rpiR family CYD39_RS13000 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYD39_RS13000 PF02558 Ketopantoate reductase PanE/ApbA CYD39_RS13005 PF07690 Major Facilitator Superfamily CYD39_RS13010 PF03466 LysR substrate binding domain CYD39_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS13015 PF12838 4Fe-4S dicluster domain CYD39_RS13020 PF01648 4'-phosphopantetheinyl transferase superfamily CYD39_RS13025 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYD39_RS13030 PF11967 Recombination protein O N terminal CYD39_RS13030 PF02565 Recombination protein O C terminal CYD39_RS13035 PF07650 KH domain CYD39_RS13035 PF01926 50S ribosome-binding GTPase CYD39_RS13040 PF00035 Double-stranded RNA binding motif CYD39_RS13040 PF14622 Ribonuclease-III-like CYD39_RS13045 PF10502 Signal peptidase, peptidase S26 CYD39_RS13050 PF00679 Elongation factor G C-terminus CYD39_RS13050 PF06421 GTP-binding protein LepA C-terminus CYD39_RS13050 PF03144 Elongation factor Tu domain 2 CYD39_RS13050 PF00009 Elongation factor Tu GTP binding domain CYD39_RS13060 PF03888 MucB/RseB N-terminal domain CYD39_RS13060 PF17188 MucB/RseB C-terminal domain CYD39_RS13065 PF03873 Anti sigma-E protein RseA, C-terminal domain CYD39_RS13065 PF03872 Anti sigma-E protein RseA, N-terminal domain CYD39_RS13070 PF08281 Sigma-70, region 4 CYD39_RS13070 PF04542 Sigma-70 region 2 CYD39_RS13085 PF02910 Fumarate reductase flavoprotein C-term CYD39_RS13085 PF00890 FAD binding domain CYD39_RS13090 PF05175 Methyltransferase small domain CYD39_RS13095 PF00270 DEAD/DEAH box helicase CYD39_RS13095 PF00271 Helicase conserved C-terminal domain CYD39_RS13100 PF03466 LysR substrate binding domain CYD39_RS13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS13105 PF01810 LysE type translocator CYD39_RS13110 PF01228 Glycine radical CYD39_RS13115 PF03167 Uracil DNA glycosylase superfamily CYD39_RS13120 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYD39_RS13120 PF00588 SpoU rRNA Methylase family CYD39_RS13125 PF00085 Thioredoxin CYD39_RS13130 PF03942 DTW domain CYD39_RS13135 PF13607 Succinyl-CoA ligase like flavodoxin domain CYD39_RS13135 PF13380 CoA binding domain CYD39_RS13135 PF00583 Acetyltransferase (GNAT) family CYD39_RS13140 PF13091 PLD-like domain CYD39_RS13145 PF10043 Predicted periplasmic lipoprotein (DUF2279) CYD39_RS13150 PF00083 Sugar (and other) transporter CYD39_RS13180 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS13180 PF07724 AAA domain (Cdc48 subfamily) CYD39_RS13180 PF17871 AAA lid domain CYD39_RS13180 PF02861 Clp amino terminal domain, pathogenicity island component CYD39_RS13180 PF10431 C-terminal, D2-small domain, of ClpB protein CYD39_RS13185 PF02578 Multi-copper polyphenol oxidoreductase laccase CYD39_RS13190 PF00849 RNA pseudouridylate synthase CYD39_RS13190 PF01479 S4 domain CYD39_RS13195 PF13525 Outer membrane lipoprotein CYD39_RS13200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYD39_RS13210 PF00800 Prephenate dehydratase CYD39_RS13210 PF01817 Chorismate mutase type II CYD39_RS13215 PF08450 SMP-30/Gluconolactonase/LRE-like region CYD39_RS13220 PF02153 Prephenate dehydrogenase CYD39_RS13220 PF01817 Chorismate mutase type II CYD39_RS13225 PF00793 DAHP synthetase I family CYD39_RS13230 PF13689 YfiR/HmsC-like CYD39_RS13235 PF17152 Periplasmic sensor domain CYD39_RS13235 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS13240 PF01245 Ribosomal protein L19 CYD39_RS13245 PF01746 tRNA (Guanine-1)-methyltransferase CYD39_RS13250 PF01782 RimM N-terminal domain CYD39_RS13250 PF05239 PRC-barrel domain CYD39_RS13255 PF00886 Ribosomal protein S16 CYD39_RS13260 PF00448 SRP54-type protein, GTPase domain CYD39_RS13260 PF02881 SRP54-type protein, helical bundle domain CYD39_RS13260 PF02978 Signal peptide binding domain CYD39_RS13265 PF01578 Cytochrome C assembly protein CYD39_RS13270 PF01595 Cyclin M transmembrane N-terminal domain CYD39_RS13270 PF03471 Transporter associated domain CYD39_RS13270 PF00571 CBS domain CYD39_RS13280 PF01025 GrpE CYD39_RS13285 PF01513 ATP-NAD kinase CYD39_RS13290 PF02463 RecF/RecN/SMC N terminal domain CYD39_RS13295 PF04355 SmpA / OmlA family CYD39_RS13300 PF03658 RnfH family Ubiquitin CYD39_RS13305 PF03364 Polyketide cyclase / dehydrase and lipid transport CYD39_RS13310 PF01668 SmpB protein CYD39_RS13325 PF00664 ABC transporter transmembrane region CYD39_RS13325 PF00005 ABC transporter CYD39_RS13330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS13330 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS13340 PF04606 Ogr/Delta-like zinc finger CYD39_RS13380 PF02796 Helix-turn-helix domain of resolvase CYD39_RS13380 PF00239 Resolvase, N terminal domain CYD39_RS13395 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CYD39_RS13495 PF00145 C-5 cytosine-specific DNA methylase CYD39_RS13510 PF05840 Bacteriophage replication gene A protein (GPA) CYD39_RS13515 PF02086 D12 class N6 adenine-specific DNA methyltransferase CYD39_RS13530 PF17282 Family of unknown function (DUF5347) CYD39_RS13545 PF06892 Phage regulatory protein CII (CP76) CYD39_RS13555 PF16452 Bacteriophage CI repressor C-terminal domain CYD39_RS13555 PF07022 Bacteriophage CI repressor helix-turn-helix domain CYD39_RS13560 PF02899 Phage integrase, N-terminal SAM-like domain CYD39_RS13560 PF00589 Phage integrase family CYD39_RS13565 PF08808 RES domain CYD39_RS13570 PF00589 Phage integrase family CYD39_RS13570 PF13356 Arm DNA-binding domain CYD39_RS13595 PF06722 Protein of unknown function (DUF1205) CYD39_RS13600 PF00005 ABC transporter CYD39_RS13600 PF00664 ABC transporter transmembrane region CYD39_RS13610 PF00756 Putative esterase CYD39_RS13615 PF00593 TonB dependent receptor CYD39_RS13615 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS13630 PF00805 Pentapeptide repeats (8 copies) CYD39_RS13635 PF04393 Protein of unknown function (DUF535) CYD39_RS13650 PF03824 High-affinity nickel-transport protein CYD39_RS13655 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS13660 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS13660 PF00072 Response regulator receiver domain CYD39_RS13675 PF01970 Tripartite tricarboxylate transporter TctA family CYD39_RS13680 PF08943 CsiD CYD39_RS13685 PF01266 FAD dependent oxidoreductase CYD39_RS13690 PF00171 Aldehyde dehydrogenase family CYD39_RS13695 PF00202 Aminotransferase class-III CYD39_RS13700 PF00324 Amino acid permease CYD39_RS13705 PF07729 FCD domain CYD39_RS13705 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS13710 PF01476 LysM domain CYD39_RS13710 PF04972 BON domain CYD39_RS13720 PF01679 Proteolipid membrane potential modulator CYD39_RS13725 PF01022 Bacterial regulatory protein, arsR family CYD39_RS13730 PF11127 Protein of unknown function (DUF2892) CYD39_RS13730 PF00581 Rhodanese-like domain CYD39_RS13740 PF00816 H-NS histone family CYD39_RS13750 PF06610 L-alanine exporter CYD39_RS13755 PF09400 Protein of unknown function (DUF2002) CYD39_RS13760 PF05957 Bacterial protein of unknown function (DUF883) CYD39_RS13765 PF00155 Aminotransferase class I and II CYD39_RS13765 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS13770 PF02627 Carboxymuconolactone decarboxylase family CYD39_RS13780 PF00462 Glutaredoxin CYD39_RS13785 PF07972 NrdI Flavodoxin like CYD39_RS13790 PF02867 Ribonucleotide reductase, barrel domain CYD39_RS13790 PF00317 Ribonucleotide reductase, all-alpha domain CYD39_RS13790 PF08343 Ribonucleotide reductase N-terminal CYD39_RS13795 PF00268 Ribonucleotide reductase, small chain CYD39_RS13800 PF00005 ABC transporter CYD39_RS13800 PF00571 CBS domain CYD39_RS13805 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS13810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYD39_RS13815 PF07690 Major Facilitator Superfamily CYD39_RS13820 PF01047 MarR family CYD39_RS13825 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS13825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS13830 PF07690 Major Facilitator Superfamily CYD39_RS13840 PF02664 S-Ribosylhomocysteinase (LuxS) CYD39_RS13845 PF04262 Glutamate-cysteine ligase CYD39_RS13850 PF09335 SNARE associated Golgi protein CYD39_RS13855 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS13885 PF02599 Global regulator protein family CYD39_RS13890 PF02272 DHHA1 domain CYD39_RS13890 PF01411 tRNA synthetases class II (A) CYD39_RS13890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYD39_RS13900 PF02631 RecX family CYD39_RS13905 PF00154 recA bacterial DNA recombination protein CYD39_RS13910 PF02464 Competence-damaged protein CYD39_RS13920 PF13406 Transglycosylase SLT domain CYD39_RS13925 PF03608 PTS system enzyme II sorbitol-specific factor CYD39_RS13930 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CYD39_RS13930 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CYD39_RS13935 PF03829 PTS system glucitol/sorbitol-specific IIA component CYD39_RS13940 PF00106 short chain dehydrogenase CYD39_RS13945 PF06923 Glucitol operon activator protein (GutM) CYD39_RS13950 PF00455 DeoR C terminal sensor domain CYD39_RS13950 PF08220 DeoR-like helix-turn-helix domain CYD39_RS13955 PF00571 CBS domain CYD39_RS13955 PF01380 SIS domain CYD39_RS13960 PF00158 Sigma-54 interaction domain CYD39_RS13960 PF01590 GAF domain CYD39_RS13965 PF00753 Metallo-beta-lactamase superfamily CYD39_RS13965 PF00258 Flavodoxin CYD39_RS13965 PF00301 Rubredoxin CYD39_RS13970 PF18113 Rubredoxin binding C-terminal domain CYD39_RS13970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS13975 PF01300 Telomere recombination CYD39_RS13975 PF07503 HypF finger CYD39_RS13975 PF00708 Acylphosphatase CYD39_RS13975 PF17788 HypF Kae1-like domain CYD39_RS13980 PF13247 4Fe-4S dicluster domain CYD39_RS13980 PF12800 4Fe-4S binding domain CYD39_RS13990 PF01750 Hydrogenase maturation protease CYD39_RS13995 PF07450 Formate hydrogenlyase maturation protein HycH CYD39_RS14000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYD39_RS14005 PF12838 4Fe-4S dicluster domain CYD39_RS14010 PF00374 Nickel-dependent hydrogenase CYD39_RS14010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYD39_RS14010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYD39_RS14015 PF00146 NADH dehydrogenase CYD39_RS14020 PF00361 Proton-conducting membrane transporter CYD39_RS14025 PF13247 4Fe-4S dicluster domain CYD39_RS14030 PF11046 Transcriptional repressor of hyc and hyp operons CYD39_RS14035 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CYD39_RS14040 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYD39_RS14045 PF01455 HupF/HypC family CYD39_RS14050 PF01924 Hydrogenase formation hypA family CYD39_RS14055 PF02769 AIR synthase related protein, C-terminal domain CYD39_RS14055 PF00586 AIR synthase related protein, N-terminal domain CYD39_RS14060 PF00158 Sigma-54 interaction domain CYD39_RS14060 PF02954 Bacterial regulatory protein, Fis family CYD39_RS14060 PF01590 GAF domain CYD39_RS14065 PF11756 Nitrous oxide-stimulated promoter CYD39_RS14070 PF01297 Zinc-uptake complex component A periplasmic CYD39_RS14075 PF00005 ABC transporter CYD39_RS14080 PF00950 ABC 3 transport family CYD39_RS14085 PF00950 ABC 3 transport family CYD39_RS14090 PF03421 YopJ Serine/Threonine acetyltransferase CYD39_RS14100 PF12833 Helix-turn-helix domain CYD39_RS14115 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) CYD39_RS14120 PF01514 Secretory protein of YscJ/FliF family CYD39_RS14130 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CYD39_RS14135 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CYD39_RS14140 PF12833 Helix-turn-helix domain CYD39_RS14145 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS14150 PF01464 Transglycosylase SLT domain CYD39_RS14155 PF03545 Yersinia virulence determinant (YopE) CYD39_RS14155 PF00102 Protein-tyrosine phosphatase CYD39_RS14155 PF09119 SicP binding CYD39_RS14160 PF05932 Tir chaperone protein (CesT) family CYD39_RS14170 PF00550 Phosphopantetheine attachment site CYD39_RS14175 PF09052 SipA N-terminal domain CYD39_RS14180 PF06511 Type III secretion systems tip complex components CYD39_RS14185 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) CYD39_RS14190 PF16535 Type III cell invasion protein SipB CYD39_RS14190 PF04888 Secretion system effector C (SseC) like family CYD39_RS14195 PF07720 Tetratricopeptide repeat CYD39_RS14200 PF01312 FlhB HrpN YscU SpaS Family CYD39_RS14205 PF01311 Bacterial export proteins, family 1 CYD39_RS14210 PF01313 Bacterial export proteins, family 3 CYD39_RS14215 PF00813 FliP family CYD39_RS14220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYD39_RS14225 PF02510 Surface presentation of antigens protein CYD39_RS14230 PF02090 Salmonella surface presentation of antigen gene type M protein CYD39_RS14235 PF18269 T3SS EscN ATPase C-terminal domain CYD39_RS14235 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYD39_RS14235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS14240 PF03519 Invasion protein B family CYD39_RS14245 PF00771 FHIPEP family CYD39_RS14250 PF07201 HrpJ-like domain CYD39_RS14255 PF03958 Bacterial type II/III secretion system short domain CYD39_RS14255 PF00263 Bacterial type II and III secretion system protein CYD39_RS14260 PF12833 Helix-turn-helix domain CYD39_RS14265 PF04741 InvH outer membrane lipoprotein CYD39_RS14300 PF00149 Calcineurin-like phosphoesterase CYD39_RS14325 PF00488 MutS domain V CYD39_RS14325 PF05190 MutS family domain IV CYD39_RS14325 PF01624 MutS domain I CYD39_RS14325 PF05188 MutS domain II CYD39_RS14325 PF05192 MutS domain III CYD39_RS14335 PF07690 Major Facilitator Superfamily CYD39_RS14340 PF03466 LysR substrate binding domain CYD39_RS14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS14345 PF02447 GntP family permease CYD39_RS14350 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS14355 PF01261 Xylose isomerase-like TIM barrel CYD39_RS14360 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS14365 PF07005 Sugar-binding N-terminal domain CYD39_RS14365 PF17042 Nucleotide-binding C-terminal domain CYD39_RS14370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYD39_RS14370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYD39_RS14375 PF00455 DeoR C terminal sensor domain CYD39_RS14375 PF08220 DeoR-like helix-turn-helix domain CYD39_RS14380 PF01047 MarR family CYD39_RS14385 PF02441 Flavoprotein CYD39_RS14390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYD39_RS14400 PF04539 Sigma-70 region 3 CYD39_RS14400 PF04542 Sigma-70 region 2 CYD39_RS14400 PF00140 Sigma-70 factor, region 1.2 CYD39_RS14400 PF04545 Sigma-70, region 4 CYD39_RS14405 PF01551 Peptidase family M23 CYD39_RS14405 PF01476 LysM domain CYD39_RS14415 PF01975 Survival protein SurE CYD39_RS14420 PF01142 tRNA pseudouridine synthase D (TruD) CYD39_RS14425 PF02542 YgbB family CYD39_RS14430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYD39_RS14435 PF04977 Septum formation initiator CYD39_RS14440 PF12084 Protein of unknown function (DUF3561) CYD39_RS14450 PF00009 Elongation factor Tu GTP binding domain CYD39_RS14455 PF01507 Phosphoadenosine phosphosulfate reductase family CYD39_RS14460 PF04389 Peptidase family M28 CYD39_RS14465 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CYD39_RS14470 PF01867 CRISPR associated protein Cas1 CYD39_RS14480 PF09704 CRISPR-associated protein (Cas_Cas5) CYD39_RS14485 PF09344 CT1975-like protein CYD39_RS14495 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CYD39_RS14500 PF00271 Helicase conserved C-terminal domain CYD39_RS14500 PF18019 HD domain CYD39_RS14500 PF00270 DEAD/DEAH box helicase CYD39_RS14510 PF01507 Phosphoadenosine phosphosulfate reductase family CYD39_RS14520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYD39_RS14520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYD39_RS14525 PF00667 FAD binding domain CYD39_RS14525 PF00175 Oxidoreductase NAD-binding domain CYD39_RS14525 PF00258 Flavodoxin CYD39_RS14530 PF01242 6-pyruvoyl tetrahydropterin synthase CYD39_RS14535 PF12706 Beta-lactamase superfamily domain CYD39_RS14535 PF03099 Biotin/lipoate A/B protein ligase family CYD39_RS14540 PF04055 Radical SAM superfamily CYD39_RS14545 PF03952 Enolase, N-terminal domain CYD39_RS14545 PF00113 Enolase, C-terminal TIM barrel domain CYD39_RS14550 PF06418 CTP synthase N-terminus CYD39_RS14550 PF00117 Glutamine amidotransferase class-I CYD39_RS14555 PF03819 MazG nucleotide pyrophosphohydrolase domain CYD39_RS14560 PF00419 Fimbrial protein CYD39_RS14565 PF00577 Outer membrane usher protein CYD39_RS14565 PF13954 PapC N-terminal domain CYD39_RS14565 PF13953 PapC C-terminal domain CYD39_RS14570 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS14570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS14575 PF00419 Fimbrial protein CYD39_RS14585 PF00419 Fimbrial protein CYD39_RS14610 PF02824 TGS domain CYD39_RS14610 PF04607 Region found in RelA / SpoT proteins CYD39_RS14610 PF13291 ACT domain CYD39_RS14615 PF05958 tRNA (Uracil-5-)-methyltransferase CYD39_RS14615 PF01938 TRAM domain CYD39_RS14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS14620 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS14620 PF01627 Hpt domain CYD39_RS14620 PF00072 Response regulator receiver domain CYD39_RS14620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYD39_RS14620 PF00672 HAMP domain CYD39_RS14625 PF02595 Glycerate kinase family CYD39_RS14630 PF13378 Enolase C-terminal domain-like CYD39_RS14635 PF13378 Enolase C-terminal domain-like CYD39_RS14635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS14640 PF07690 Major Facilitator Superfamily CYD39_RS14645 PF00258 Flavodoxin CYD39_RS14650 PF00849 RNA pseudouridylate synthase CYD39_RS14655 PF04287 tRNA pseudouridine synthase C CYD39_RS14665 PF07348 Syd protein (SUKH-2) CYD39_RS14670 PF14489 QueF-like protein CYD39_RS14670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CYD39_RS14675 PF03641 Possible lysine decarboxylase CYD39_RS14675 PF11892 Domain of unknown function (DUF3412) CYD39_RS14675 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CYD39_RS14685 PF03315 Serine dehydratase beta chain CYD39_RS14685 PF03313 Serine dehydratase alpha chain CYD39_RS14690 PF01367 5'-3' exonuclease, C-terminal SAM fold CYD39_RS14690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYD39_RS14695 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS14700 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS14705 PF07690 Major Facilitator Superfamily CYD39_RS14710 PF02952 L-fucose isomerase, C-terminal domain CYD39_RS14710 PF07881 L-fucose isomerase, first N-terminal domain CYD39_RS14710 PF07882 L-fucose isomerase, second N-terminal domain CYD39_RS14715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS14715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS14720 PF05025 RbsD / FucU transport protein family CYD39_RS14725 PF08220 DeoR-like helix-turn-helix domain CYD39_RS14725 PF00455 DeoR C terminal sensor domain CYD39_RS14730 PF01728 FtsJ-like methyltransferase CYD39_RS14730 PF18125 RlmM ferredoxin-like domain CYD39_RS14735 PF04241 Protein of unknown function (DUF423) CYD39_RS14740 PF03466 LysR substrate binding domain CYD39_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS14745 PF06004 Bacterial protein of unknown function (DUF903) CYD39_RS14750 PF00266 Aminotransferase class-V CYD39_RS14755 PF02657 Fe-S metabolism associated domain CYD39_RS14760 PF00892 EamA-like transporter family CYD39_RS14765 PF00899 ThiF family CYD39_RS14770 PF03562 MltA specific insert domain CYD39_RS14770 PF06725 3D domain CYD39_RS14785 PF11741 AMIN domain CYD39_RS14785 PF01520 N-acetylmuramoyl-L-alanine amidase CYD39_RS14790 PF00696 Amino acid kinase family CYD39_RS14790 PF00583 Acetyltransferase (GNAT) family CYD39_RS14795 PF13538 UvrD-like helicase C-terminal domain CYD39_RS14800 PF13361 UvrD-like helicase C-terminal domain CYD39_RS14800 PF00580 UvrD/REP helicase N-terminal domain CYD39_RS14800 PF12705 PD-(D/E)XK nuclease superfamily CYD39_RS14805 PF16187 Middle or third domain of peptidase_M16 CYD39_RS14805 PF00675 Insulinase (Peptidase family M16) CYD39_RS14805 PF05193 Peptidase M16 inactive domain CYD39_RS14810 PF17946 RecC C-terminal domain CYD39_RS14815 PF07963 Prokaryotic N-terminal methylation motif CYD39_RS14815 PF12528 Type II secretion prepilin peptidase dependent protein C CYD39_RS14820 PF10713 Protein of unknown function (DUF2509) CYD39_RS14825 PF07963 Prokaryotic N-terminal methylation motif CYD39_RS14830 PF07963 Prokaryotic N-terminal methylation motif CYD39_RS14835 PF00303 Thymidylate synthase CYD39_RS14840 PF01790 Prolipoprotein diacylglyceryl transferase CYD39_RS14850 PF05524 PEP-utilising enzyme, N-terminal CYD39_RS14850 PF00391 PEP-utilising enzyme, mobile domain CYD39_RS14850 PF02896 PEP-utilising enzyme, TIM barrel domain CYD39_RS14850 PF01590 GAF domain CYD39_RS14855 PF00293 NUDIX domain CYD39_RS14860 PF02976 DNA mismatch repair enzyme MutH CYD39_RS14865 PF03741 Integral membrane protein TerC family CYD39_RS14870 PF06004 Bacterial protein of unknown function (DUF903) CYD39_RS14875 PF00248 Aldo/keto reductase family CYD39_RS14880 PF07690 Major Facilitator Superfamily CYD39_RS14885 PF00501 AMP-binding enzyme CYD39_RS14885 PF01553 Acyltransferase CYD39_RS14890 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS14895 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS14900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYD39_RS14900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYD39_RS14905 PF03466 LysR substrate binding domain CYD39_RS14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS14910 PF01177 Asp/Glu/Hydantoin racemase CYD39_RS14915 PF00083 Sugar (and other) transporter CYD39_RS14925 PF04962 KduI/IolB family CYD39_RS14930 PF02803 Thiolase, C-terminal domain CYD39_RS14930 PF00108 Thiolase, N-terminal domain CYD39_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS14935 PF03466 LysR substrate binding domain CYD39_RS14945 PF03222 Tryptophan/tyrosine permease family CYD39_RS14950 PF02583 Metal-sensitive transcriptional repressor CYD39_RS14955 PF03824 High-affinity nickel-transport protein CYD39_RS14975 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS14975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS14980 PF00577 Outer membrane usher protein CYD39_RS14980 PF13954 PapC N-terminal domain CYD39_RS14980 PF13953 PapC C-terminal domain CYD39_RS14995 PF13505 Outer membrane protein beta-barrel domain CYD39_RS15020 PF01551 Peptidase family M23 CYD39_RS15020 PF01476 LysM domain CYD39_RS15025 PF00293 NUDIX domain CYD39_RS15030 PF00152 tRNA synthetases class II (D, K and N) CYD39_RS15030 PF01336 OB-fold nucleic acid binding domain CYD39_RS15040 PF01368 DHH family CYD39_RS15040 PF17768 RecJ OB domain CYD39_RS15040 PF02272 DHHA1 domain CYD39_RS15045 PF13098 Thioredoxin-like domain CYD39_RS15045 PF10411 Disulfide bond isomerase protein N-terminus CYD39_RS15050 PF02899 Phage integrase, N-terminal SAM-like domain CYD39_RS15050 PF00589 Phage integrase family CYD39_RS15055 PF00258 Flavodoxin CYD39_RS15060 PF07254 Membrane-bound toxin component of toxin-antitoxin system CYD39_RS15065 PF03937 Flavinator of succinate dehydrogenase CYD39_RS15070 PF01571 Aminomethyltransferase folate-binding domain CYD39_RS15075 PF03006 Haemolysin-III related CYD39_RS15080 PF04266 ASCH domain CYD39_RS15085 PF00232 Glycosyl hydrolase family 1 CYD39_RS15100 PF02347 Glycine cleavage system P-protein CYD39_RS15105 PF01597 Glycine cleavage H-protein CYD39_RS15110 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYD39_RS15110 PF01571 Aminomethyltransferase folate-binding domain CYD39_RS15115 PF01494 FAD binding domain CYD39_RS15120 PF01494 FAD binding domain CYD39_RS15125 PF05195 Aminopeptidase P, N-terminal domain CYD39_RS15125 PF00557 Metallopeptidase family M24 CYD39_RS15130 PF03695 Uncharacterised protein family (UPF0149) CYD39_RS15135 PF05164 Cell division protein ZapA CYD39_RS15145 PF01812 5-formyltetrahydrofolate cyclo-ligase family CYD39_RS15150 PF01842 ACT domain CYD39_RS15150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYD39_RS15150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD39_RS15155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYD39_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS15160 PF03466 LysR substrate binding domain CYD39_RS15170 PF04402 Protein of unknown function (DUF541) CYD39_RS15175 PF01810 LysE type translocator CYD39_RS15180 PF00924 Mechanosensitive ion channel CYD39_RS15180 PF05552 Conserved TM helix CYD39_RS15185 PF01116 Fructose-bisphosphate aldolase class-II CYD39_RS15190 PF00162 Phosphoglycerate kinase CYD39_RS15195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYD39_RS15195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYD39_RS15215 PF00005 ABC transporter CYD39_RS15220 PF00005 ABC transporter CYD39_RS15225 PF02780 Transketolase, C-terminal domain CYD39_RS15225 PF02779 Transketolase, pyrimidine binding domain CYD39_RS15225 PF00456 Transketolase, thiamine diphosphate binding domain CYD39_RS15230 PF01435 Peptidase family M48 CYD39_RS15235 PF00491 Arginase family CYD39_RS15240 PF12697 Alpha/beta hydrolase family CYD39_RS15245 PF04074 YhcH/YjgK/YiaL CYD39_RS15250 PF02615 Malate/L-lactate dehydrogenase CYD39_RS15255 PF00107 Zinc-binding dehydrogenase CYD39_RS15255 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS15260 PF08125 Mannitol dehydrogenase C-terminal domain CYD39_RS15260 PF01232 Mannitol dehydrogenase Rossmann domain CYD39_RS15270 PF07729 FCD domain CYD39_RS15270 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS15280 PF17944 Arginine decarboxylase C-terminal helical extension CYD39_RS15280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYD39_RS15280 PF17810 Arginine decarboxylase helical bundle domain CYD39_RS15295 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYD39_RS15295 PF02772 S-adenosylmethionine synthetase, central domain CYD39_RS15295 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYD39_RS15300 PF00083 Sugar (and other) transporter CYD39_RS15305 PF17283 SprT-like zinc ribbon domain CYD39_RS15305 PF10263 SprT-like family CYD39_RS15310 PF04231 Endonuclease I CYD39_RS15315 PF04452 RNA methyltransferase CYD39_RS15320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYD39_RS15320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYD39_RS15325 PF02622 Uncharacterized ACR, COG1678 CYD39_RS15330 PF03652 Holliday junction resolvase CYD39_RS15340 PF00437 Type II/IV secretion system protein CYD39_RS15345 PF01168 Alanine racemase, N-terminal domain CYD39_RS15350 PF02325 YGGT family CYD39_RS15355 PF02594 Uncharacterised ACR, YggU family COG1872 CYD39_RS15360 PF01725 Ham1 family CYD39_RS15365 PF04055 Radical SAM superfamily CYD39_RS15365 PF06969 HemN C-terminal domain CYD39_RS15370 PF06717 Protein of unknown function (DUF1202) CYD39_RS15375 PF00710 Asparaginase, N-terminal CYD39_RS15375 PF17763 Glutaminase/Asparaginase C-terminal domain CYD39_RS15380 PF11101 Protein of unknown function (DUF2884) CYD39_RS15385 PF04320 Protein with unknown function (DUF469) CYD39_RS15390 PF02390 Putative methyltransferase CYD39_RS15395 PF14815 NUDIX domain CYD39_RS15395 PF00730 HhH-GPD superfamily base excision DNA repair protein CYD39_RS15395 PF00633 Helix-hairpin-helix motif CYD39_RS15400 PF04362 Bacterial Fe(2+) trafficking CYD39_RS15405 PF01464 Transglycosylase SLT domain CYD39_RS15405 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CYD39_RS15410 PF03825 Nucleoside H+ symporter CYD39_RS15415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS15415 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS15415 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYD39_RS15420 PF04474 Protein of unknown function (DUF554) CYD39_RS15455 PF01320 Colicin immunity protein / pyocin immunity protein CYD39_RS15465 PF01320 Colicin immunity protein / pyocin immunity protein CYD39_RS15505 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS15515 PF13520 Amino acid permease CYD39_RS15525 PF01266 FAD dependent oxidoreductase CYD39_RS15530 PF00171 Aldehyde dehydrogenase family CYD39_RS15535 PF04965 Gene 25-like lysozyme CYD39_RS15545 PF01522 Polysaccharide deacetylase CYD39_RS15555 PF07690 Major Facilitator Superfamily CYD39_RS15560 PF03786 D-mannonate dehydratase (UxuA) CYD39_RS15565 PF08125 Mannitol dehydrogenase C-terminal domain CYD39_RS15565 PF01232 Mannitol dehydrogenase Rossmann domain CYD39_RS15570 PF02614 Glucuronate isomerase CYD39_RS15580 PF05257 CHAP domain CYD39_RS15580 PF03738 Glutathionylspermidine synthase preATP-grasp CYD39_RS15585 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS15595 PF01497 Periplasmic binding protein CYD39_RS15600 PF01455 HupF/HypC family CYD39_RS15605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CYD39_RS15610 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CYD39_RS15615 PF01750 Hydrogenase maturation protease CYD39_RS15620 PF00374 Nickel-dependent hydrogenase CYD39_RS15625 PF03916 Polysulphide reductase, NrfD CYD39_RS15630 PF13247 4Fe-4S dicluster domain CYD39_RS15635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYD39_RS15635 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CYD39_RS15640 PF11115 Protein of unknown function (DUF2623) CYD39_RS15645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS15645 PF02203 Tar ligand binding domain homologue CYD39_RS15645 PF00672 HAMP domain CYD39_RS15650 PF03350 Uncharacterized protein family, UPF0114 CYD39_RS15675 PF02472 Biopolymer transport protein ExbD/TolR CYD39_RS15680 PF01618 MotA/TolQ/ExbB proton channel family CYD39_RS15685 PF01053 Cys/Met metabolism PLP-dependent enzyme CYD39_RS15690 PF09335 SNARE associated Golgi protein CYD39_RS15695 PF12833 Helix-turn-helix domain CYD39_RS15695 PF06719 AraC-type transcriptional regulator N-terminus CYD39_RS15700 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS15705 PF00248 Aldo/keto reductase family CYD39_RS15710 PF00939 Sodium:sulfate symporter transmembrane region CYD39_RS15720 PF12883 Protein of unknown function (DUF3828) CYD39_RS15725 PF04728 Lipoprotein leucine-zipper CYD39_RS15730 PF07969 Amidohydrolase family CYD39_RS15745 PF11842 Domain of unknown function (DUF3362) CYD39_RS15745 PF04055 Radical SAM superfamily CYD39_RS15745 PF08497 Radical SAM N-terminal CYD39_RS15750 PF03480 Bacterial extracellular solute-binding protein, family 7 CYD39_RS15760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYD39_RS15765 PF07732 Multicopper oxidase CYD39_RS15765 PF07731 Multicopper oxidase CYD39_RS15765 PF00394 Multicopper oxidase CYD39_RS15770 PF01553 Acyltransferase CYD39_RS15775 PF03989 DNA gyrase C-terminal domain, beta-propeller CYD39_RS15775 PF00521 DNA gyrase/topoisomerase IV, subunit A CYD39_RS15780 PF06445 GyrI-like small molecule binding domain CYD39_RS15785 PF04076 Bacterial OB fold (BOF) protein CYD39_RS15790 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS15790 PF00072 Response regulator receiver domain CYD39_RS15795 PF08521 Two-component sensor kinase N-terminal CYD39_RS15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS15795 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS15800 PF02525 Flavodoxin-like fold CYD39_RS15805 PF03992 Antibiotic biosynthesis monooxygenase CYD39_RS15810 PF00204 DNA gyrase B CYD39_RS15810 PF00986 DNA gyrase B subunit, carboxyl terminus CYD39_RS15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS15810 PF01751 Toprim domain CYD39_RS15815 PF05728 Uncharacterised protein family (UPF0227) CYD39_RS15820 PF00149 Calcineurin-like phosphoesterase CYD39_RS15825 PF06853 Protein of unknown function (DUF1249) CYD39_RS15830 PF00293 NUDIX domain CYD39_RS15835 PF02321 Outer membrane efflux protein CYD39_RS15840 PF06693 Protein of unknown function (DUF1190) CYD39_RS15845 PF03738 Glutathionylspermidine synthase preATP-grasp CYD39_RS15850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CYD39_RS15855 PF02535 ZIP Zinc transporter CYD39_RS15860 PF17425 Arylsulfotransferase Ig-like domain CYD39_RS15860 PF05935 Arylsulfotransferase (ASST) CYD39_RS15865 PF01323 DSBA-like thioredoxin domain CYD39_RS15870 PF02600 Disulfide bond formation protein DsbB CYD39_RS15880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYD39_RS15885 PF04380 Membrane fusogenic activity CYD39_RS15890 PF08971 Glycogen synthesis protein CYD39_RS15895 PF07290 Protein of unknown function (DUF1449) CYD39_RS15900 PF01145 SPFH domain / Band 7 family CYD39_RS15900 PF15975 Flotillin CYD39_RS15910 PF00294 pfkB family carbohydrate kinase CYD39_RS15910 PF01467 Cytidylyltransferase-like CYD39_RS15915 PF08335 GlnD PII-uridylyltransferase CYD39_RS15915 PF03710 Glutamate-ammonia ligase adenylyltransferase CYD39_RS15920 PF01928 CYTH domain CYD39_RS15925 PF08239 Bacterial SH3 domain CYD39_RS15930 PF12627 Probable RNA and SrmB- binding site of polymerase A CYD39_RS15930 PF01743 Poly A polymerase head domain CYD39_RS15930 PF01966 HD domain CYD39_RS15935 PF02673 Bacitracin resistance protein BacA CYD39_RS15940 PF02152 Dihydroneopterin aldolase CYD39_RS15945 PF02660 Glycerol-3-phosphate acyltransferase CYD39_RS15960 PF00814 Glycoprotease family CYD39_RS15965 PF01165 Ribosomal protein S21 CYD39_RS15970 PF08275 DNA primase catalytic core, N-terminal domain CYD39_RS15970 PF01807 CHC2 zinc finger CYD39_RS15970 PF08278 DNA primase DnaG DnaB-binding CYD39_RS15970 PF10410 DnaB-helicase binding domain of primase CYD39_RS15975 PF04546 Sigma-70, non-essential region CYD39_RS15975 PF03979 Sigma-70 factor, region 1.1 CYD39_RS15975 PF00140 Sigma-70 factor, region 1.2 CYD39_RS15975 PF04542 Sigma-70 region 2 CYD39_RS15975 PF04539 Sigma-70 region 3 CYD39_RS15975 PF04545 Sigma-70, region 4 CYD39_RS15980 PF03167 Uracil DNA glycosylase superfamily CYD39_RS15990 PF08021 Siderophore-interacting FAD-binding domain CYD39_RS15990 PF04954 Siderophore-interacting protein CYD39_RS15995 PF03551 Transcriptional regulator PadR-like family CYD39_RS16000 PF02203 Tar ligand binding domain homologue CYD39_RS16000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS16000 PF00672 HAMP domain CYD39_RS16005 PF08447 PAS fold CYD39_RS16005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS16010 PF00202 Aminotransferase class-III CYD39_RS16015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS16015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYD39_RS16020 PF05175 Methyltransferase small domain CYD39_RS16025 PF01863 Protein of unknown function DUF45 CYD39_RS16030 PF02698 DUF218 domain CYD39_RS16035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS16040 PF03741 Integral membrane protein TerC family CYD39_RS16045 PF00375 Sodium:dicarboxylate symporter family CYD39_RS16050 PF09335 SNARE associated Golgi protein CYD39_RS16055 PF13721 SecD export protein N-terminal TM region CYD39_RS16060 PF06476 Protein of unknown function (DUF1090) CYD39_RS16065 PF05957 Bacterial protein of unknown function (DUF883) CYD39_RS16070 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CYD39_RS16075 PF13997 YqjK-like protein CYD39_RS16080 PF07681 DoxX CYD39_RS16085 PF13409 Glutathione S-transferase, N-terminal domain CYD39_RS16090 PF05656 Protein of unknown function (DUF805) CYD39_RS16095 PF03466 LysR substrate binding domain CYD39_RS16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS16100 PF17954 Quercetinase C-terminal cupin domain CYD39_RS16100 PF02678 Pirin CYD39_RS16110 PF03313 Serine dehydratase alpha chain CYD39_RS16120 PF03315 Serine dehydratase beta chain CYD39_RS16120 PF03313 Serine dehydratase alpha chain CYD39_RS16125 PF02901 Pyruvate formate lyase-like CYD39_RS16125 PF01228 Glycine radical CYD39_RS16130 PF00871 Acetokinase family CYD39_RS16135 PF03222 Tryptophan/tyrosine permease family CYD39_RS16140 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS16145 PF03466 LysR substrate binding domain CYD39_RS16155 PF02595 Glycerate kinase family CYD39_RS16160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYD39_RS16160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYD39_RS16165 PF03328 HpcH/HpaI aldolase/citrate lyase family CYD39_RS16170 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CYD39_RS16170 PF08666 SAF domain CYD39_RS16175 PF01116 Fructose-bisphosphate aldolase class-II CYD39_RS16180 PF08013 Tagatose 6 phosphate kinase CYD39_RS16185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS16190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS16195 PF03611 PTS system sugar-specific permease component CYD39_RS16200 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS16200 PF00107 Zinc-binding dehydrogenase CYD39_RS16205 PF08220 DeoR-like helix-turn-helix domain CYD39_RS16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS16215 PF04348 LppC putative lipoprotein CYD39_RS16220 PF02021 Uncharacterised protein family UPF0102 CYD39_RS16225 PF13580 SIS domain CYD39_RS16230 PF04972 BON domain CYD39_RS16235 PF13460 NAD(P)H-binding CYD39_RS16240 PF01965 DJ-1/PfpI family CYD39_RS16250 PF01541 GIY-YIG catalytic domain CYD39_RS16255 PF13508 Acetyltransferase (GNAT) domain CYD39_RS16260 PF02036 SCP-2 sterol transfer family CYD39_RS16265 PF01136 Peptidase family U32 CYD39_RS16270 PF01136 Peptidase family U32 CYD39_RS16275 PF00296 Luciferase-like monooxygenase CYD39_RS16280 PF03734 L,D-transpeptidase catalytic domain CYD39_RS16290 PF03222 Tryptophan/tyrosine permease family CYD39_RS16295 PF00270 DEAD/DEAH box helicase CYD39_RS16295 PF00271 Helicase conserved C-terminal domain CYD39_RS16295 PF03880 DbpA RNA binding domain CYD39_RS16295 PF12343 Cold shock protein DEAD box A CYD39_RS16305 PF13181 Tetratricopeptide repeat CYD39_RS16305 PF07719 Tetratricopeptide repeat CYD39_RS16310 PF00013 KH domain CYD39_RS16310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYD39_RS16310 PF01138 3' exoribonuclease family, domain 1 CYD39_RS16310 PF03725 3' exoribonuclease family, domain 2 CYD39_RS16310 PF00575 S1 RNA binding domain CYD39_RS16315 PF00312 Ribosomal protein S15 CYD39_RS16320 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYD39_RS16320 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYD39_RS16320 PF09157 Pseudouridine synthase II TruB, C-terminal CYD39_RS16325 PF02033 Ribosome-binding factor A CYD39_RS16330 PF00009 Elongation factor Tu GTP binding domain CYD39_RS16330 PF11987 Translation-initiation factor 2 CYD39_RS16330 PF08364 Bacterial translation initiation factor IF-2 associated region CYD39_RS16330 PF04760 Translation initiation factor IF-2, N-terminal region CYD39_RS16335 PF08529 NusA N-terminal domain CYD39_RS16335 PF13184 NusA-like KH domain CYD39_RS16340 PF17384 RimP C-terminal SH3 domain CYD39_RS16340 PF02576 RimP N-terminal domain CYD39_RS16350 PF00764 Arginosuccinate synthase CYD39_RS16365 PF03840 Preprotein translocase SecG subunit CYD39_RS16370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYD39_RS16370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYD39_RS16370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYD39_RS16370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYD39_RS16375 PF00809 Pterin binding enzyme CYD39_RS16380 PF06480 FtsH Extracellular CYD39_RS16380 PF01434 Peptidase family M41 CYD39_RS16380 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS16380 PF17862 AAA+ lid domain CYD39_RS16385 PF01728 FtsJ-like methyltransferase CYD39_RS16390 PF01985 CRS1 / YhbY (CRM) domain CYD39_RS16395 PF01272 Transcription elongation factor, GreA/GreB, C-term CYD39_RS16395 PF03449 Transcription elongation factor, N-terminal CYD39_RS16400 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYD39_RS16405 PF01018 GTP1/OBG CYD39_RS16405 PF01926 50S ribosome-binding GTPase CYD39_RS16410 PF00892 EamA-like transporter family CYD39_RS16415 PF01016 Ribosomal L27 protein CYD39_RS16420 PF00829 Ribosomal prokaryotic L21 protein CYD39_RS16425 PF00348 Polyprenyl synthetase CYD39_RS16430 PF13693 Winged helix-turn-helix DNA-binding CYD39_RS16435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYD39_RS16440 PF01722 BolA-like protein CYD39_RS16445 PF13466 STAS domain CYD39_RS16450 PF05494 MlaC protein CYD39_RS16455 PF02470 MlaD protein CYD39_RS16460 PF02405 Permease MlaE CYD39_RS16465 PF00005 ABC transporter CYD39_RS16470 PF01699 Sodium/calcium exchanger protein CYD39_RS16475 PF00571 CBS domain CYD39_RS16475 PF01380 SIS domain CYD39_RS16485 PF06835 Lipopolysaccharide-assembly, LptC-related CYD39_RS16490 PF03968 OstA-like protein CYD39_RS16495 PF00005 ABC transporter CYD39_RS16495 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYD39_RS16500 PF00309 Sigma-54 factor, Activator interacting domain (AID) CYD39_RS16500 PF04963 Sigma-54 factor, core binding domain CYD39_RS16500 PF04552 Sigma-54, DNA binding domain CYD39_RS16505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYD39_RS16510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS16515 PF03668 P-loop ATPase protein family CYD39_RS16520 PF00381 PTS HPr component phosphorylation site CYD39_RS16525 PF10707 PhoP regulatory network protein YrbL CYD39_RS16530 PF00912 Transglycosylase CYD39_RS16540 PF18415 Histidine kinase receptor ArcB trans-membrane domain CYD39_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS16540 PF00989 PAS fold CYD39_RS16540 PF01627 Hpt domain CYD39_RS16540 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS16540 PF00072 Response regulator receiver domain CYD39_RS16545 PF04055 Radical SAM superfamily CYD39_RS16545 PF16199 Radical_SAM C-terminal domain CYD39_RS16550 PF01493 GXGXG motif CYD39_RS16550 PF01645 Conserved region in glutamate synthase CYD39_RS16550 PF04898 Glutamate synthase central domain CYD39_RS16550 PF00310 Glutamine amidotransferases class-II CYD39_RS16555 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS16555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYD39_RS16560 PF06250 YhcG PDDEXK nuclease domain CYD39_RS16560 PF17761 DUF1016 N-terminal domain CYD39_RS16565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CYD39_RS16570 PF07969 Amidohydrolase family CYD39_RS16575 PF04074 YhcH/YjgK/YiaL CYD39_RS16580 PF00480 ROK family CYD39_RS16585 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CYD39_RS16590 PF07690 Major Facilitator Superfamily CYD39_RS16595 PF00701 Dihydrodipicolinate synthetase family CYD39_RS16600 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS16600 PF07729 FCD domain CYD39_RS16605 PF04386 Stringent starvation protein B CYD39_RS16610 PF02798 Glutathione S-transferase, N-terminal domain CYD39_RS16610 PF00043 Glutathione S-transferase, C-terminal domain CYD39_RS16615 PF00380 Ribosomal protein S9/S16 CYD39_RS16620 PF00572 Ribosomal protein L13 CYD39_RS16625 PF03969 AFG1-like ATPase CYD39_RS16630 PF06295 Protein of unknown function (DUF1043) CYD39_RS16635 PF13180 PDZ domain CYD39_RS16635 PF00595 PDZ domain CYD39_RS16640 PF13180 PDZ domain CYD39_RS16645 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CYD39_RS16650 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CYD39_RS16655 PF00364 Biotin-requiring enzyme CYD39_RS16655 PF00682 HMGL-like CYD39_RS16655 PF02436 Conserved carboxylase domain CYD39_RS16660 PF04277 Oxaloacetate decarboxylase, gamma chain CYD39_RS16665 PF05683 Fumarase C-terminus CYD39_RS16670 PF05681 Fumarate hydratase (Fumerase) CYD39_RS16675 PF00939 Sodium:sulfate symporter transmembrane region CYD39_RS16685 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS16685 PF07702 UTRA domain CYD39_RS16690 PF00056 lactate/malate dehydrogenase, NAD binding domain CYD39_RS16690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYD39_RS16695 PF01316 Arginine repressor, DNA binding domain CYD39_RS16695 PF02863 Arginine repressor, C-terminal domain CYD39_RS16700 PF07338 Protein of unknown function (DUF1471) CYD39_RS16705 PF07338 Protein of unknown function (DUF1471) CYD39_RS16710 PF01337 Barstar (barnase inhibitor) CYD39_RS16715 PF04632 Fusaric acid resistance protein family CYD39_RS16720 PF13533 Biotin-lipoyl like CYD39_RS16725 PF07869 Protein of unknown function (DUF1656) CYD39_RS16730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS16730 PF03466 LysR substrate binding domain CYD39_RS16735 PF01523 Putative modulator of DNA gyrase CYD39_RS16740 PF13502 AsmA-like C-terminal region CYD39_RS16740 PF13116 Protein of unknown function CYD39_RS16745 PF00575 S1 RNA binding domain CYD39_RS16745 PF10150 Ribonuclease E/G family CYD39_RS16750 PF02545 Maf-like protein CYD39_RS16755 PF04093 rod shape-determining protein MreD CYD39_RS16760 PF04085 rod shape-determining protein MreC CYD39_RS16770 PF00563 EAL domain CYD39_RS16770 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS16770 PF17157 Gammaproteobacterial periplasmic sensor domain CYD39_RS16775 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS16775 PF00107 Zinc-binding dehydrogenase CYD39_RS16780 PF00174 Oxidoreductase molybdopterin binding domain CYD39_RS16785 PF01794 Ferric reductase like transmembrane component CYD39_RS16795 PF00364 Biotin-requiring enzyme CYD39_RS16800 PF00289 Biotin carboxylase, N-terminal domain CYD39_RS16800 PF02785 Biotin carboxylase C-terminal domain CYD39_RS16800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYD39_RS16805 PF06196 Protein of unknown function (DUF997) CYD39_RS16810 PF00474 Sodium:solute symporter family CYD39_RS16825 PF01207 Dihydrouridine synthase (Dus) CYD39_RS16830 PF02954 Bacterial regulatory protein, Fis family CYD39_RS16835 PF01555 DNA methylase CYD39_RS16840 PF10831 Protein of unknown function (DUF2556) CYD39_RS16845 PF00563 EAL domain CYD39_RS16845 PF03707 Bacterial signalling protein N terminal repeat CYD39_RS16845 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS16850 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS16850 PF08361 MAATS-type transcriptional repressor, C-terminal region CYD39_RS16855 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS16855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS16860 PF00873 AcrB/AcrD/AcrF family CYD39_RS16900 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS16905 PF07369 Protein of unknown function (DUF1488) CYD39_RS16910 PF08501 Shikimate dehydrogenase substrate binding domain CYD39_RS16910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYD39_RS16910 PF01488 Shikimate / quinate 5-dehydrogenase CYD39_RS16915 PF01300 Telomere recombination CYD39_RS16920 PF01396 Topoisomerase DNA binding C4 zinc finger CYD39_RS16925 PF04361 Protein of unknown function (DUF494) CYD39_RS16930 PF02481 DNA recombination-mediator protein A CYD39_RS16930 PF17782 DprA winged helix domain CYD39_RS16935 PF01327 Polypeptide deformylase CYD39_RS16940 PF00551 Formyl transferase CYD39_RS16940 PF02911 Formyl transferase, C-terminal domain CYD39_RS16945 PF01189 16S rRNA methyltransferase RsmB/F CYD39_RS16945 PF01029 NusB family CYD39_RS16950 PF02254 TrkA-N domain CYD39_RS16950 PF02080 TrkA-C domain CYD39_RS16955 PF01741 Large-conductance mechanosensitive channel, MscL CYD39_RS16960 PF03889 Alternative ribosome-rescue factor A CYD39_RS16965 PF13411 MerR HTH family regulatory protein CYD39_RS16970 PF09350 Domain of unknown function (DUF1992) CYD39_RS16975 PF01196 Ribosomal protein L17 CYD39_RS16980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYD39_RS16980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYD39_RS16980 PF01000 RNA polymerase Rpb3/RpoA insert domain CYD39_RS16985 PF01479 S4 domain CYD39_RS16985 PF00163 Ribosomal protein S4/S9 N-terminal domain CYD39_RS16990 PF00411 Ribosomal protein S11 CYD39_RS16995 PF00416 Ribosomal protein S13/S18 CYD39_RS17000 PF00444 Ribosomal protein L36 CYD39_RS17005 PF00344 SecY translocase CYD39_RS17010 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYD39_RS17015 PF00327 Ribosomal protein L30p/L7e CYD39_RS17020 PF00333 Ribosomal protein S5, N-terminal domain CYD39_RS17020 PF03719 Ribosomal protein S5, C-terminal domain CYD39_RS17025 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYD39_RS17030 PF00347 Ribosomal protein L6 CYD39_RS17035 PF00410 Ribosomal protein S8 CYD39_RS17040 PF00253 Ribosomal protein S14p/S29e CYD39_RS17045 PF00281 Ribosomal protein L5 CYD39_RS17045 PF00673 ribosomal L5P family C-terminus CYD39_RS17050 PF00467 KOW motif CYD39_RS17050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYD39_RS17055 PF00238 Ribosomal protein L14p/L23e CYD39_RS17060 PF00366 Ribosomal protein S17 CYD39_RS17065 PF00831 Ribosomal L29 protein CYD39_RS17070 PF00252 Ribosomal protein L16p/L10e CYD39_RS17075 PF00189 Ribosomal protein S3, C-terminal domain CYD39_RS17075 PF07650 KH domain CYD39_RS17080 PF00237 Ribosomal protein L22p/L17e CYD39_RS17085 PF00203 Ribosomal protein S19 CYD39_RS17090 PF03947 Ribosomal Proteins L2, C-terminal domain CYD39_RS17090 PF00181 Ribosomal Proteins L2, RNA binding domain CYD39_RS17095 PF00276 Ribosomal protein L23 CYD39_RS17100 PF00573 Ribosomal protein L4/L1 family CYD39_RS17105 PF00297 Ribosomal protein L3 CYD39_RS17110 PF00338 Ribosomal protein S10p/S20e CYD39_RS17115 PF01478 Type IV leader peptidase family CYD39_RS17120 PF00210 Ferritin-like domain CYD39_RS17125 PF04324 BFD-like [2Fe-2S] binding domain CYD39_RS17130 PF03143 Elongation factor Tu C-terminal domain CYD39_RS17130 PF03144 Elongation factor Tu domain 2 CYD39_RS17130 PF00009 Elongation factor Tu GTP binding domain CYD39_RS17135 PF00679 Elongation factor G C-terminus CYD39_RS17135 PF14492 Elongation Factor G, domain II CYD39_RS17135 PF03764 Elongation factor G, domain IV CYD39_RS17135 PF03144 Elongation factor Tu domain 2 CYD39_RS17135 PF00009 Elongation factor Tu GTP binding domain CYD39_RS17140 PF00177 Ribosomal protein S7p/S5e CYD39_RS17145 PF00164 Ribosomal protein S12/S23 CYD39_RS17150 PF04077 DsrH like protein CYD39_RS17155 PF02635 DsrE/DsrF-like family CYD39_RS17160 PF02635 DsrE/DsrF-like family CYD39_RS17165 PF08348 YheO-like PAS domain CYD39_RS17165 PF13309 HTH domain CYD39_RS17170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYD39_RS17170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CYD39_RS17175 PF04102 SlyX CYD39_RS17180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYD39_RS17185 PF09526 Probable metal-binding protein (DUF2387) CYD39_RS17190 PF02254 TrkA-N domain CYD39_RS17190 PF00999 Sodium/hydrogen exchanger family CYD39_RS17195 PF02525 Flavodoxin-like fold CYD39_RS17200 PF00005 ABC transporter CYD39_RS17200 PF12848 ABC transporter CYD39_RS17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS17205 PF03466 LysR substrate binding domain CYD39_RS17210 PF08803 Putative mono-oxygenase ydhR CYD39_RS17215 PF00561 alpha/beta hydrolase fold CYD39_RS17220 PF06794 Uncharacterised protein family (UPF0270) CYD39_RS17225 PF00485 Phosphoribulokinase / Uridine kinase family CYD39_RS17230 PF02566 OsmC-like protein CYD39_RS17235 PF00027 Cyclic nucleotide-binding domain CYD39_RS17235 PF13545 Crp-like helix-turn-helix domain CYD39_RS17240 PF12805 FUSC-like inner membrane protein yccS CYD39_RS17245 PF00202 Aminotransferase class-III CYD39_RS17250 PF00117 Glutamine amidotransferase class-I CYD39_RS17255 PF02661 Fic/DOC family CYD39_RS17260 PF10832 Protein of unknown function (DUF2559) CYD39_RS17265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYD39_RS17270 PF07690 Major Facilitator Superfamily CYD39_RS17275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYD39_RS17275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS17275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYD39_RS17275 PF04324 BFD-like [2Fe-2S] binding domain CYD39_RS17275 PF18267 Rubredoxin NAD+ reductase C-terminal domain CYD39_RS17280 PF13806 Rieske-like [2Fe-2S] domain CYD39_RS17285 PF01226 Formate/nitrite transporter CYD39_RS17290 PF10414 Sirohaem synthase dimerisation region CYD39_RS17290 PF14824 Sirohaem biosynthesis protein central CYD39_RS17290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYD39_RS17305 PF13978 Protein of unknown function (DUF4223) CYD39_RS17310 PF00579 tRNA synthetases class I (W and Y) CYD39_RS17315 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS17320 PF00834 Ribulose-phosphate 3 epimerase family CYD39_RS17325 PF02086 D12 class N6 adenine-specific DNA methyltransferase CYD39_RS17330 PF05036 Sporulation related domain CYD39_RS17335 PF01761 3-dehydroquinate synthase CYD39_RS17340 PF01202 Shikimate kinase CYD39_RS17345 PF03958 Bacterial type II/III secretion system short domain CYD39_RS17345 PF00263 Bacterial type II and III secretion system protein CYD39_RS17350 PF10748 DNA utilization proteins HofP CYD39_RS17360 PF05137 Fimbrial assembly protein (PilN) CYD39_RS17370 PF17092 Penicillin-binding protein OB-like domain CYD39_RS17370 PF00912 Transglycosylase CYD39_RS17370 PF00905 Penicillin binding protein transpeptidase domain CYD39_RS17375 PF00293 NUDIX domain CYD39_RS17380 PF07095 Intracellular growth attenuator protein IgaA CYD39_RS17385 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS17390 PF01479 S4 domain CYD39_RS17395 PF01430 Hsp33 protein CYD39_RS17405 PF13687 Domain of unknown function (DUF4153) CYD39_RS17410 PF01293 Phosphoenolpyruvate carboxykinase CYD39_RS17415 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS17415 PF00672 HAMP domain CYD39_RS17420 PF00072 Response regulator receiver domain CYD39_RS17420 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS17425 PF01272 Transcription elongation factor, GreA/GreB, C-term CYD39_RS17425 PF03449 Transcription elongation factor, N-terminal CYD39_RS17430 PF17674 HHH domain CYD39_RS17430 PF16921 Tex protein YqgF-like domain CYD39_RS17430 PF09371 Tex-like protein N-terminal domain CYD39_RS17430 PF00575 S1 RNA binding domain CYD39_RS17435 PF04023 FeoA domain CYD39_RS17440 PF07670 Nucleoside recognition CYD39_RS17440 PF07664 Ferrous iron transport protein B C terminus CYD39_RS17440 PF17910 FeoB cytosolic helical domain CYD39_RS17440 PF02421 Ferrous iron transport protein B CYD39_RS17445 PF09012 FeoC like transcriptional regulator CYD39_RS17450 PF04754 Putative transposase, YhgA-like CYD39_RS17455 PF00561 alpha/beta hydrolase fold CYD39_RS17460 PF00156 Phosphoribosyl transferase domain CYD39_RS17465 PF01521 Iron-sulphur cluster biosynthesis CYD39_RS17465 PF01106 NifU-like domain CYD39_RS17470 PF02447 GntP family permease CYD39_RS17475 PF02446 4-alpha-glucanotransferase CYD39_RS17480 PF00343 Carbohydrate phosphorylase CYD39_RS17485 PF17874 MalT-like TPR region CYD39_RS17485 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS17495 PF01137 RNA 3'-terminal phosphate cyclase CYD39_RS17495 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CYD39_RS17500 PF01139 tRNA-splicing ligase RtcB CYD39_RS17510 PF06956 Regulator of RNA terminal phosphate cyclase CYD39_RS17510 PF00158 Sigma-54 interaction domain CYD39_RS17515 PF00455 DeoR C terminal sensor domain CYD39_RS17515 PF08220 DeoR-like helix-turn-helix domain CYD39_RS17520 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CYD39_RS17520 PF01694 Rhomboid family CYD39_RS17525 PF00581 Rhodanese-like domain CYD39_RS17530 PF01266 FAD dependent oxidoreductase CYD39_RS17530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CYD39_RS17545 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS17550 PF07690 Major Facilitator Superfamily CYD39_RS17555 PF00920 Dehydratase family CYD39_RS17560 PF00701 Dihydrodipicolinate synthetase family CYD39_RS17565 PF01614 Bacterial transcriptional regulator CYD39_RS17565 PF09339 IclR helix-turn-helix domain CYD39_RS17570 PF00343 Carbohydrate phosphorylase CYD39_RS17575 PF08323 Starch synthase catalytic domain CYD39_RS17575 PF00534 Glycosyl transferases group 1 CYD39_RS17580 PF00483 Nucleotidyl transferase CYD39_RS17585 PF18390 Glycogen debranching enzyme C-terminal domain CYD39_RS17585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYD39_RS17585 PF00128 Alpha amylase, catalytic domain CYD39_RS17590 PF00128 Alpha amylase, catalytic domain CYD39_RS17590 PF02806 Alpha amylase, C-terminal all-beta domain CYD39_RS17590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYD39_RS17595 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYD39_RS17595 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYD39_RS17605 PF02447 GntP family permease CYD39_RS17610 PF01202 Shikimate kinase CYD39_RS17615 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS17615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYD39_RS17620 PF02678 Pirin CYD39_RS17620 PF17954 Quercetinase C-terminal cupin domain CYD39_RS17625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYD39_RS17625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS17630 PF00583 Acetyltransferase (GNAT) family CYD39_RS17635 PF00294 pfkB family carbohydrate kinase CYD39_RS17650 PF02126 Phosphotriesterase family CYD39_RS17660 PF10956 Protein of unknown function (DUF2756) CYD39_RS17665 PF03009 Glycerophosphoryl diester phosphodiesterase family CYD39_RS17670 PF17912 MalK OB fold domain CYD39_RS17670 PF00005 ABC transporter CYD39_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS17685 PF13416 Bacterial extracellular solute-binding protein CYD39_RS17695 PF00005 ABC transporter CYD39_RS17700 PF00005 ABC transporter CYD39_RS17700 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYD39_RS17705 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS17705 PF11862 Domain of unknown function (DUF3382) CYD39_RS17710 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS17715 PF13458 Periplasmic binding protein CYD39_RS17720 PF12568 Acetyltransferase (GNAT) domain, PanZ CYD39_RS17725 PF13458 Periplasmic binding protein CYD39_RS17730 PF04545 Sigma-70, region 4 CYD39_RS17730 PF04542 Sigma-70 region 2 CYD39_RS17735 PF02687 FtsX-like permease family CYD39_RS17735 PF18075 FtsX extracellular domain CYD39_RS17740 PF00005 ABC transporter CYD39_RS17745 PF00448 SRP54-type protein, GTPase domain CYD39_RS17745 PF02881 SRP54-type protein, helical bundle domain CYD39_RS17755 PF06611 Protein of unknown function (DUF1145) CYD39_RS17760 PF10694 Protein of unknown function (DUF2500) CYD39_RS17765 PF07947 YhhN family CYD39_RS17770 PF00403 Heavy-metal-associated domain CYD39_RS17775 PF00672 HAMP domain CYD39_RS17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS17775 PF02203 Tar ligand binding domain homologue CYD39_RS17780 PF01206 Sulfurtransferase TusA CYD39_RS17785 PF02592 Putative vitamin uptake transporter CYD39_RS17790 PF08786 DcrB CYD39_RS17795 PF07690 Major Facilitator Superfamily CYD39_RS17800 PF01594 AI-2E family transporter CYD39_RS17805 PF01648 4'-phosphopantetheinyl transferase superfamily CYD39_RS17810 PF01402 Ribbon-helix-helix protein, copG family CYD39_RS17810 PF08753 NikR C terminal nickel binding domain CYD39_RS17820 PF00005 ABC transporter CYD39_RS17825 PF13533 Biotin-lipoyl like CYD39_RS17835 PF01384 Phosphate transporter family CYD39_RS17840 PF10625 Universal stress protein B (UspB) CYD39_RS17845 PF00582 Universal stress protein family CYD39_RS17850 PF00854 POT family CYD39_RS17855 PF04445 Putative SAM-dependent methyltransferase CYD39_RS17860 PF01432 Peptidase family M3 CYD39_RS17875 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CYD39_RS17880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD39_RS17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS17885 PF00710 Asparaginase, N-terminal CYD39_RS17885 PF17763 Glutaminase/Asparaginase C-terminal domain CYD39_RS17890 PF03605 Anaerobic c4-dicarboxylate membrane transporter CYD39_RS17895 PF00294 pfkB family carbohydrate kinase CYD39_RS17900 PF01380 SIS domain CYD39_RS17905 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS17905 PF07702 UTRA domain CYD39_RS17910 PF01204 Trehalase CYD39_RS17925 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS17930 PF03466 LysR substrate binding domain CYD39_RS17935 PF03631 Virulence factor BrkB CYD39_RS17940 PF07690 Major Facilitator Superfamily CYD39_RS17940 PF00083 Sugar (and other) transporter CYD39_RS17945 PF05170 AsmA family CYD39_RS17950 PF00563 EAL domain CYD39_RS17955 PF00294 pfkB family carbohydrate kinase CYD39_RS17960 PF00675 Insulinase (Peptidase family M16) CYD39_RS17960 PF05193 Peptidase M16 inactive domain CYD39_RS17965 PF00375 Sodium:dicarboxylate symporter family CYD39_RS17970 PF00563 EAL domain CYD39_RS17970 PF00672 HAMP domain CYD39_RS17970 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS17970 PF17154 Gammaproteobacterial periplasmic sensor domain CYD39_RS17975 PF13176 Tetratricopeptide repeat CYD39_RS17975 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CYD39_RS17980 PF01270 Glycosyl hydrolases family 8 CYD39_RS17985 PF03170 Bacterial cellulose synthase subunit CYD39_RS17990 PF07238 PilZ domain CYD39_RS17990 PF03552 Cellulose synthase CYD39_RS17990 PF00535 Glycosyl transferase family 2 CYD39_RS17995 PF06564 Cellulose biosynthesis protein BcsQ CYD39_RS18000 PF10945 Cellulose biosynthesis protein BcsR CYD39_RS18005 PF10995 Cellulose biosynthesis GIL CYD39_RS18010 PF11120 Cellulose biosynthesis protein BcsF CYD39_RS18015 PF11658 Cellulose biosynthesis protein BcsG CYD39_RS18020 PF13940 Toxin Ldr, type I toxin-antitoxin system CYD39_RS18030 PF03222 Tryptophan/tyrosine permease family CYD39_RS18035 PF00005 ABC transporter CYD39_RS18035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS18040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYD39_RS18040 PF00005 ABC transporter CYD39_RS18045 PF12911 N-terminal TM domain of oligopeptide transport permease C CYD39_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS18050 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS18055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS18060 PF00860 Permease family CYD39_RS18070 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS18090 PF00884 Sulfatase CYD39_RS18090 PF08019 Phosphoethanolamine transferase EptA/EptB CYD39_RS18095 PF00419 Fimbrial protein CYD39_RS18100 PF00419 Fimbrial protein CYD39_RS18105 PF00577 Outer membrane usher protein CYD39_RS18105 PF13954 PapC N-terminal domain CYD39_RS18105 PF13953 PapC C-terminal domain CYD39_RS18110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS18110 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS18115 PF00419 Fimbrial protein CYD39_RS18120 PF03797 Autotransporter beta-domain CYD39_RS18125 PF03352 Methyladenine glycosylase CYD39_RS18130 PF00583 Acetyltransferase (GNAT) family CYD39_RS18135 PF01568 Molydopterin dinucleotide binding domain CYD39_RS18135 PF18364 Molybdopterin oxidoreductase N-terminal domain CYD39_RS18135 PF00384 Molybdopterin oxidoreductase CYD39_RS18140 PF13488 Glycine zipper CYD39_RS18140 PF00691 OmpA family CYD39_RS18145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD39_RS18145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYD39_RS18150 PF11254 Protein of unknown function (DUF3053) CYD39_RS18155 PF01381 Helix-turn-helix CYD39_RS18160 PF00313 'Cold-shock' DNA-binding domain CYD39_RS18185 PF00665 Integrase core domain CYD39_RS18185 PF13333 Integrase core domain CYD39_RS18185 PF13276 HTH-like domain CYD39_RS18190 PF13276 HTH-like domain CYD39_RS18190 PF00665 Integrase core domain CYD39_RS18190 PF13333 Integrase core domain CYD39_RS18195 PF02092 Glycyl-tRNA synthetase beta subunit CYD39_RS18195 PF05746 DALR anticodon binding domain CYD39_RS18200 PF02091 Glycyl-tRNA synthetase alpha subunit CYD39_RS18205 PF13983 YsaB-like lipoprotein CYD39_RS18215 PF01757 Acyltransferase family CYD39_RS18220 PF05360 yiaA/B two helix domain CYD39_RS18225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS18225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS18235 PF12833 Helix-turn-helix domain CYD39_RS18240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYD39_RS18245 PF00128 Alpha amylase, catalytic domain CYD39_RS18250 PF00155 Aminotransferase class I and II CYD39_RS18255 PF13247 4Fe-4S dicluster domain CYD39_RS18260 PF01614 Bacterial transcriptional regulator CYD39_RS18260 PF09339 IclR helix-turn-helix domain CYD39_RS18265 PF02615 Malate/L-lactate dehydrogenase CYD39_RS18270 PF04074 YhcH/YjgK/YiaL CYD39_RS18275 PF16154 Domain of unknown function (DUF4862) CYD39_RS18280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYD39_RS18285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYD39_RS18290 PF03480 Bacterial extracellular solute-binding protein, family 7 CYD39_RS18295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS18295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS18300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYD39_RS18305 PF01261 Xylose isomerase-like TIM barrel CYD39_RS18310 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS18320 PF07944 Beta-L-arabinofuranosidase, GH127 CYD39_RS18325 PF00171 Aldehyde dehydrogenase family CYD39_RS18330 PF00480 ROK family CYD39_RS18335 PF00009 Elongation factor Tu GTP binding domain CYD39_RS18335 PF09107 Elongation factor SelB, winged helix CYD39_RS18335 PF09106 Elongation factor SelB, winged helix CYD39_RS18335 PF03144 Elongation factor Tu domain 2 CYD39_RS18340 PF03841 L-seryl-tRNA selenium transferase CYD39_RS18340 PF12390 Selenocysteine synthase N terminal CYD39_RS18345 PF00043 Glutathione S-transferase, C-terminal domain CYD39_RS18345 PF13417 Glutathione S-transferase, N-terminal domain CYD39_RS18350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYD39_RS18350 PF00529 HlyD membrane-fusion protein of T1SS CYD39_RS18355 PF11742 Protein of unknown function (DUF3302) CYD39_RS18365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS18365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS18365 PF02378 Phosphotransferase system, EIIC CYD39_RS18370 PF01232 Mannitol dehydrogenase Rossmann domain CYD39_RS18370 PF08125 Mannitol dehydrogenase C-terminal domain CYD39_RS18375 PF05068 Mannitol repressor CYD39_RS18385 PF10928 Protein of unknown function (DUF2810) CYD39_RS18390 PF11622 Protein of unknown function (DUF3251) CYD39_RS18395 PF05658 Head domain of trimeric autotransporter adhesin CYD39_RS18395 PF03895 YadA-like membrane anchor domain CYD39_RS18395 PF13018 Extended Signal Peptide of Type V secretion system CYD39_RS18395 PF05662 Coiled stalk of trimeric autotransporter adhesin CYD39_RS18400 PF02652 L-lactate permease CYD39_RS18405 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS18405 PF07729 FCD domain CYD39_RS18410 PF01070 FMN-dependent dehydrogenase CYD39_RS18415 PF00588 SpoU rRNA Methylase family CYD39_RS18420 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS18425 PF13378 Enolase C-terminal domain-like CYD39_RS18425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYD39_RS18430 PF07690 Major Facilitator Superfamily CYD39_RS18435 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS18435 PF06426 Serine acetyltransferase, N-terminal CYD39_RS18440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYD39_RS18440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYD39_RS18445 PF02556 Preprotein translocase subunit SecB CYD39_RS18450 PF00462 Glutaredoxin CYD39_RS18455 PF00581 Rhodanese-like domain CYD39_RS18460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CYD39_RS18460 PF01676 Metalloenzyme superfamily CYD39_RS18465 PF01551 Peptidase family M23 CYD39_RS18470 PF04748 Divergent polysaccharide deacetylase CYD39_RS18475 PF00535 Glycosyl transferase family 2 CYD39_RS18480 PF00107 Zinc-binding dehydrogenase CYD39_RS18480 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS18485 PF00155 Aminotransferase class I and II CYD39_RS18490 PF01370 NAD dependent epimerase/dehydratase family CYD39_RS18495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYD39_RS18500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYD39_RS18505 PF04932 O-Antigen ligase CYD39_RS18510 PF00534 Glycosyl transferases group 1 CYD39_RS18520 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CYD39_RS18525 PF01501 Glycosyl transferase family 8 CYD39_RS18525 PF08437 Glycosyl transferase family 8 C-terminal CYD39_RS18530 PF01501 Glycosyl transferase family 8 CYD39_RS18530 PF08437 Glycosyl transferase family 8 C-terminal CYD39_RS18535 PF13439 Glycosyltransferase Family 4 CYD39_RS18535 PF00534 Glycosyl transferases group 1 CYD39_RS18550 PF00534 Glycosyl transferases group 1 CYD39_RS18550 PF13439 Glycosyltransferase Family 4 CYD39_RS18555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYD39_RS18560 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CYD39_RS18565 PF01467 Cytidylyltransferase-like CYD39_RS18570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYD39_RS18570 PF06827 Zinc finger found in FPG and IleRS CYD39_RS18570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYD39_RS18575 PF00471 Ribosomal protein L33 CYD39_RS18580 PF00830 Ribosomal L28 family CYD39_RS18585 PF04002 RadC-like JAB domain CYD39_RS18590 PF04127 DNA / pantothenate metabolism flavoprotein CYD39_RS18590 PF02441 Flavoprotein CYD39_RS18595 PF00692 dUTPase CYD39_RS18600 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS18605 PF00156 Phosphoribosyl transferase domain CYD39_RS18610 PF03725 3' exoribonuclease family, domain 2 CYD39_RS18610 PF01138 3' exoribonuclease family, domain 1 CYD39_RS18615 PF03755 YicC-like family, N-terminal region CYD39_RS18615 PF08340 Domain of unknown function (DUF1732) CYD39_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS18620 PF03466 LysR substrate binding domain CYD39_RS18630 PF03458 UPF0126 domain CYD39_RS18635 PF01653 NAD-dependent DNA ligase adenylation domain CYD39_RS18635 PF03120 NAD-dependent DNA ligase OB-fold domain CYD39_RS18640 PF00625 Guanylate kinase CYD39_RS18645 PF01192 RNA polymerase Rpb6 CYD39_RS18650 PF13291 ACT domain CYD39_RS18650 PF04607 Region found in RelA / SpoT proteins CYD39_RS18650 PF02824 TGS domain CYD39_RS18655 PF12105 SpoU, rRNA methylase, C-terminal CYD39_RS18655 PF00588 SpoU rRNA Methylase family CYD39_RS18660 PF17191 RecG wedge domain CYD39_RS18660 PF00271 Helicase conserved C-terminal domain CYD39_RS18660 PF00270 DEAD/DEAH box helicase CYD39_RS18670 PF03616 Sodium/glutamate symporter CYD39_RS18675 PF00860 Permease family CYD39_RS18680 PF05170 AsmA family CYD39_RS18685 PF01055 Glycosyl hydrolases family 31 CYD39_RS18685 PF13802 Galactose mutarotase-like CYD39_RS18705 PF00419 Fimbrial protein CYD39_RS18715 PF00419 Fimbrial protein CYD39_RS18725 PF13953 PapC C-terminal domain CYD39_RS18725 PF13954 PapC N-terminal domain CYD39_RS18725 PF00577 Outer membrane usher protein CYD39_RS18730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS18730 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS18745 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS18750 PF03797 Autotransporter beta-domain CYD39_RS18760 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS18770 PF00857 Isochorismatase family CYD39_RS18785 PF00690 Cation transporter/ATPase, N-terminus CYD39_RS18785 PF00689 Cation transporting ATPase, C-terminus CYD39_RS18790 PF02308 MgtC family CYD39_RS18795 PF00892 EamA-like transporter family CYD39_RS18800 PF04754 Putative transposase, YhgA-like CYD39_RS18805 PF07071 KDGP aldolase CYD39_RS18810 PF03841 L-seryl-tRNA selenium transferase CYD39_RS18815 PF03613 PTS system mannose/fructose/sorbose family IID component CYD39_RS18820 PF03609 PTS system sorbose-specific iic component CYD39_RS18825 PF03830 PTS system sorbose subfamily IIB component CYD39_RS18825 PF03610 PTS system fructose IIA component CYD39_RS18835 PF00158 Sigma-54 interaction domain CYD39_RS18835 PF00874 PRD domain CYD39_RS18845 PF00232 Glycosyl hydrolase family 1 CYD39_RS18850 PF07690 Major Facilitator Superfamily CYD39_RS18870 PF01116 Fructose-bisphosphate aldolase class-II CYD39_RS18880 PF03611 PTS system sugar-specific permease component CYD39_RS18885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS18890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS18890 PF08279 HTH domain CYD39_RS18890 PF05043 Mga helix-turn-helix domain CYD39_RS18890 PF00874 PRD domain CYD39_RS18895 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS18895 PF07702 UTRA domain CYD39_RS18900 PF06711 Protein of unknown function (DUF1198) CYD39_RS18905 PF07690 Major Facilitator Superfamily CYD39_RS18910 PF07690 Major Facilitator Superfamily CYD39_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS18915 PF07730 Histidine kinase CYD39_RS18915 PF05231 MASE1 CYD39_RS18920 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS18920 PF00072 Response regulator receiver domain CYD39_RS18930 PF07690 Major Facilitator Superfamily CYD39_RS18935 PF00294 pfkB family carbohydrate kinase CYD39_RS18940 PF00455 DeoR C terminal sensor domain CYD39_RS18940 PF08220 DeoR-like helix-turn-helix domain CYD39_RS18945 PF01842 ACT domain CYD39_RS18950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS18950 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS18950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS18955 PF08049 IlvB leader peptide CYD39_RS18965 PF13939 Toxin TisB, type I toxin-antitoxin system CYD39_RS18975 PF07690 Major Facilitator Superfamily CYD39_RS18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS18985 PF03466 LysR substrate binding domain CYD39_RS18990 PF02447 GntP family permease CYD39_RS18995 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS19005 PF02656 Domain of unknown function (DUF202) CYD39_RS19010 PF02656 Domain of unknown function (DUF202) CYD39_RS19015 PF02080 TrkA-C domain CYD39_RS19015 PF06826 Predicted Permease Membrane Region CYD39_RS19020 PF00011 Hsp20/alpha crystallin family CYD39_RS19025 PF00011 Hsp20/alpha crystallin family CYD39_RS19030 PF07119 Protein of unknown function (DUF1375) CYD39_RS19035 PF07676 WD40-like Beta Propeller Repeat CYD39_RS19035 PF12566 Protein of unknown function (DUF3748) CYD39_RS19040 PF03918 Cytochrome C biogenesis protein CYD39_RS19045 PF08534 Redoxin CYD39_RS19050 PF01578 Cytochrome C assembly protein CYD39_RS19050 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CYD39_RS19055 PF03100 CcmE CYD39_RS19060 PF04995 Heme exporter protein D (CcmD) CYD39_RS19065 PF01578 Cytochrome C assembly protein CYD39_RS19070 PF03379 CcmB protein CYD39_RS19075 PF00005 ABC transporter CYD39_RS19080 PF14376 Haem-binding domain CYD39_RS19080 PF00034 Cytochrome c CYD39_RS19080 PF03150 Di-haem cytochrome c peroxidase CYD39_RS19085 PF02613 Nitrate reductase delta subunit CYD39_RS19090 PF01568 Molydopterin dinucleotide binding domain CYD39_RS19090 PF18364 Molybdopterin oxidoreductase N-terminal domain CYD39_RS19090 PF00384 Molybdopterin oxidoreductase CYD39_RS19095 PF03264 NapC/NirT cytochrome c family, N-terminal region CYD39_RS19100 PF00072 Response regulator receiver domain CYD39_RS19100 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS19105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYD39_RS19110 PF01627 Hpt domain CYD39_RS19110 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS19110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS19110 PF00672 HAMP domain CYD39_RS19110 PF00072 Response regulator receiver domain CYD39_RS19140 PF01751 Toprim domain CYD39_RS19140 PF00204 DNA gyrase B CYD39_RS19140 PF00986 DNA gyrase B subunit, carboxyl terminus CYD39_RS19140 PF18053 DNA gyrase B subunit insert domain CYD39_RS19140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS19145 PF02463 RecF/RecN/SMC N terminal domain CYD39_RS19150 PF02767 DNA polymerase III beta subunit, central domain CYD39_RS19150 PF00712 DNA polymerase III beta subunit, N-terminal domain CYD39_RS19150 PF02768 DNA polymerase III beta subunit, C-terminal domain CYD39_RS19155 PF08299 Bacterial dnaA protein helix-turn-helix CYD39_RS19155 PF00308 Bacterial dnaA protein CYD39_RS19155 PF11638 DnaA N-terminal domain CYD39_RS19160 PF00468 Ribosomal protein L34 CYD39_RS19165 PF00825 Ribonuclease P CYD39_RS19170 PF01809 Putative membrane protein insertion efficiency factor CYD39_RS19175 PF14849 YidC periplasmic domain CYD39_RS19175 PF02096 60Kd inner membrane protein CYD39_RS19180 PF12631 MnmE helical domain CYD39_RS19180 PF01926 50S ribosome-binding GTPase CYD39_RS19180 PF10396 GTP-binding protein TrmE N-terminus CYD39_RS19185 PF07690 Major Facilitator Superfamily CYD39_RS19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS19190 PF03466 LysR substrate binding domain CYD39_RS19200 PF03358 NADPH-dependent FMN reductase CYD39_RS19210 PF00860 Permease family CYD39_RS19220 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS19225 PF01895 PhoU domain CYD39_RS19230 PF00005 ABC transporter CYD39_RS19235 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS19240 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS19245 PF12849 PBP superfamily domain CYD39_RS19250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS19250 PF02378 Phosphotransferase system, EIIC CYD39_RS19255 PF08501 Shikimate dehydrogenase substrate binding domain CYD39_RS19260 PF12793 Sugar transport-related sRNA regulator N-term CYD39_RS19260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYD39_RS19265 PF01380 SIS domain CYD39_RS19270 PF12804 MobA-like NTP transferase domain CYD39_RS19270 PF00132 Bacterial transferase hexapeptide (six repeats) CYD39_RS19280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYD39_RS19280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CYD39_RS19285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS19285 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYD39_RS19290 PF00231 ATP synthase CYD39_RS19295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS19295 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYD39_RS19295 PF00306 ATP synthase alpha/beta chain, C terminal domain CYD39_RS19300 PF00213 ATP synthase delta (OSCP) subunit CYD39_RS19305 PF00430 ATP synthase B/B' CF(0) CYD39_RS19310 PF00137 ATP synthase subunit C CYD39_RS19315 PF00119 ATP synthase A chain CYD39_RS19320 PF03899 ATP synthase I chain CYD39_RS19325 PF02527 rRNA small subunit methyltransferase G CYD39_RS19330 PF13932 GidA associated domain CYD39_RS19330 PF01134 Glucose inhibited division protein A CYD39_RS19335 PF00258 Flavodoxin CYD39_RS19340 PF01037 Lrp/AsnC ligand binding domain CYD39_RS19345 PF03590 Aspartate-ammonia ligase CYD39_RS19350 PF05762 VWA domain containing CoxE-like protein CYD39_RS19355 PF17868 AAA lid domain CYD39_RS19355 PF07728 AAA domain (dynein-related subfamily) CYD39_RS19355 PF12592 Protein of unknown function (DUF3763) CYD39_RS19360 PF02705 K+ potassium transporter CYD39_RS19365 PF05025 RbsD / FucU transport protein family CYD39_RS19370 PF00005 ABC transporter CYD39_RS19375 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS19380 PF13407 Periplasmic binding protein domain CYD39_RS19385 PF00294 pfkB family carbohydrate kinase CYD39_RS19390 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS19395 PF07690 Major Facilitator Superfamily CYD39_RS19400 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS19400 PF07729 FCD domain CYD39_RS19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS19435 PF03466 LysR substrate binding domain CYD39_RS19440 PF04219 Protein of unknown function, DUF CYD39_RS19445 PF13335 Magnesium chelatase, subunit ChlI C-terminal CYD39_RS19445 PF01078 Magnesium chelatase, subunit ChlI CYD39_RS19450 PF08046 IlvGEDA operon leader peptide CYD39_RS19455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS19455 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS19455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS19465 PF01063 Amino-transferase class IV CYD39_RS19470 PF00920 Dehydratase family CYD39_RS19475 PF00291 Pyridoxal-phosphate dependent enzyme CYD39_RS19475 PF00585 C-terminal regulatory domain of Threonine dehydratase CYD39_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS19490 PF03466 LysR substrate binding domain CYD39_RS19495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYD39_RS19495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CYD39_RS19510 PF01048 Phosphorylase superfamily CYD39_RS19515 PF04973 Nicotinamide mononucleotide transporter CYD39_RS19520 PF13361 UvrD-like helicase C-terminal domain CYD39_RS19520 PF00580 UvrD/REP helicase N-terminal domain CYD39_RS19525 PF02541 Ppx/GppA phosphatase family CYD39_RS19530 PF00270 DEAD/DEAH box helicase CYD39_RS19530 PF00271 Helicase conserved C-terminal domain CYD39_RS19535 PF00085 Thioredoxin CYD39_RS19545 PF07497 Rho termination factor, RNA-binding domain CYD39_RS19545 PF07498 Rho termination factor, N-terminal domain CYD39_RS19545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYD39_RS19550 PF00953 Glycosyl transferase family 4 CYD39_RS19555 PF02706 Chain length determinant protein CYD39_RS19560 PF02350 UDP-N-acetylglucosamine 2-epimerase CYD39_RS19565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYD39_RS19565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYD39_RS19565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYD39_RS19570 PF16363 GDP-mannose 4,6 dehydratase CYD39_RS19575 PF00483 Nucleotidyl transferase CYD39_RS19575 PF00483 Nucleotidyl transferase CYD39_RS19585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYD39_RS19590 PF01943 Polysaccharide biosynthesis protein CYD39_RS19595 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CYD39_RS19600 PF06899 WzyE protein, O-antigen assembly polymerase CYD39_RS19605 PF03808 Glycosyl transferase WecB/TagA/CpsF family CYD39_RS19610 PF00324 Amino acid permease CYD39_RS19635 PF07719 Tetratricopeptide repeat CYD39_RS19635 PF07219 HemY protein N-terminus CYD39_RS19640 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CYD39_RS19645 PF02602 Uroporphyrinogen-III synthase HemD CYD39_RS19650 PF03900 Porphobilinogen deaminase, C-terminal domain CYD39_RS19650 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYD39_RS19655 PF12633 Adenylate cyclase NT domain CYD39_RS19655 PF01295 Adenylate cyclase, class-I CYD39_RS19675 PF01491 Frataxin-like domain CYD39_RS19690 PF13627 Prokaryotic lipoprotein-attachment site CYD39_RS19695 PF01678 Diaminopimelate epimerase CYD39_RS19700 PF04340 Protein of unknown function, DUF484 CYD39_RS19705 PF02899 Phage integrase, N-terminal SAM-like domain CYD39_RS19705 PF00589 Phage integrase family CYD39_RS19710 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS19715 PF13361 UvrD-like helicase C-terminal domain CYD39_RS19715 PF00580 UvrD/REP helicase N-terminal domain CYD39_RS19720 PF01544 CorA-like Mg2+ transporter protein CYD39_RS19725 PF10947 Protein of unknown function (DUF2628) CYD39_RS19735 PF00892 EamA-like transporter family CYD39_RS19740 PF03061 Thioesterase superfamily CYD39_RS19745 PF02253 Phospholipase A1 CYD39_RS19750 PF09382 RQC domain CYD39_RS19750 PF00270 DEAD/DEAH box helicase CYD39_RS19750 PF00271 Helicase conserved C-terminal domain CYD39_RS19750 PF16124 RecQ zinc-binding CYD39_RS19750 PF00570 HRDC domain CYD39_RS19755 PF01810 LysE type translocator CYD39_RS19760 PF01810 LysE type translocator CYD39_RS19765 PF12146 Serine aminopeptidase, S33 CYD39_RS19775 PF00892 EamA-like transporter family CYD39_RS19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS19780 PF03466 LysR substrate binding domain CYD39_RS19785 PF08267 Cobalamin-independent synthase, N-terminal domain CYD39_RS19785 PF01717 Cobalamin-independent synthase, Catalytic domain CYD39_RS19795 PF04055 Radical SAM superfamily CYD39_RS19795 PF13186 Iron-sulfur cluster-binding domain CYD39_RS19800 PF01738 Dienelactone hydrolase family CYD39_RS19805 PF01048 Phosphorylase superfamily CYD39_RS19810 PF02646 RmuC family CYD39_RS19815 PF01209 ubiE/COQ5 methyltransferase family CYD39_RS19820 PF02036 SCP-2 sterol transfer family CYD39_RS19825 PF03109 ABC1 family CYD39_RS19830 PF02416 mttA/Hcf106 family CYD39_RS19840 PF00902 Sec-independent protein translocase protein (TatC) CYD39_RS19845 PF01026 TatD related DNase CYD39_RS19850 PF02357 Transcription termination factor nusG CYD39_RS19855 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYD39_RS19860 PF00970 Oxidoreductase FAD-binding domain CYD39_RS19860 PF00175 Oxidoreductase NAD-binding domain CYD39_RS19865 PF17425 Arylsulfotransferase Ig-like domain CYD39_RS19865 PF05935 Arylsulfotransferase (ASST) CYD39_RS19870 PF00108 Thiolase, N-terminal domain CYD39_RS19870 PF02803 Thiolase, C-terminal domain CYD39_RS19875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYD39_RS19875 PF00378 Enoyl-CoA hydratase/isomerase CYD39_RS19875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYD39_RS19880 PF00557 Metallopeptidase family M24 CYD39_RS19885 PF01205 Uncharacterized protein family UPF0029 CYD39_RS19885 PF09186 Domain of unknown function (DUF1949) CYD39_RS19890 PF02386 Cation transport protein CYD39_RS19895 PF12724 Flavodoxin domain CYD39_RS19925 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CYD39_RS19930 PF12804 MobA-like NTP transferase domain CYD39_RS19935 PF06288 Protein of unknown function (DUF1040) CYD39_RS19940 PF01636 Phosphotransferase enzyme family CYD39_RS19945 PF01323 DSBA-like thioredoxin domain CYD39_RS19950 PF01553 Acyltransferase CYD39_RS19955 PF00476 DNA polymerase family A CYD39_RS19955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYD39_RS19955 PF01367 5'-3' exonuclease, C-terminal SAM fold CYD39_RS19955 PF01612 3'-5' exonuclease CYD39_RS19960 PF01926 50S ribosome-binding GTPase CYD39_RS19970 PF04220 Der GTPase activator (YihI) CYD39_RS19975 PF06969 HemN C-terminal domain CYD39_RS19975 PF04055 Radical SAM superfamily CYD39_RS19985 PF00158 Sigma-54 interaction domain CYD39_RS19985 PF02954 Bacterial regulatory protein, Fis family CYD39_RS19985 PF00072 Response regulator receiver domain CYD39_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS19990 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS19990 PF00989 PAS fold CYD39_RS19995 PF03951 Glutamine synthetase, beta-Grasp domain CYD39_RS19995 PF00120 Glutamine synthetase, catalytic domain CYD39_RS20000 PF00679 Elongation factor G C-terminus CYD39_RS20000 PF03144 Elongation factor Tu domain 2 CYD39_RS20000 PF00009 Elongation factor Tu GTP binding domain CYD39_RS20015 PF04055 Radical SAM superfamily CYD39_RS20035 PF06178 Oligogalacturonate-specific porin protein (KdgM) CYD39_RS20050 PF01055 Glycosyl hydrolases family 31 CYD39_RS20060 PF01263 Aldose 1-epimerase CYD39_RS20070 PF01791 DeoC/LacD family aldolase CYD39_RS20075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYD39_RS20075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYD39_RS20080 PF00294 pfkB family carbohydrate kinase CYD39_RS20085 PF08220 DeoR-like helix-turn-helix domain CYD39_RS20085 PF00455 DeoR C terminal sensor domain CYD39_RS20090 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS20095 PF03631 Virulence factor BrkB CYD39_RS20100 PF02580 D-Tyr-tRNA(Tyr) deacylase CYD39_RS20105 PF09500 Putative thioesterase (yiiD_Cterm) CYD39_RS20105 PF00583 Acetyltransferase (GNAT) family CYD39_RS20110 PF01381 Helix-turn-helix CYD39_RS20115 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CYD39_RS20120 PF07859 alpha/beta hydrolase fold CYD39_RS20125 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CYD39_RS20135 PF04216 Protein involved in formate dehydrogenase formation CYD39_RS20140 PF01292 Prokaryotic cytochrome b561 CYD39_RS20145 PF09163 Formate dehydrogenase N, transmembrane CYD39_RS20145 PF13247 4Fe-4S dicluster domain CYD39_RS20155 PF02634 FdhD/NarQ family CYD39_RS20160 PF12889 Protein of unknown function (DUF3829) CYD39_RS20170 PF00183 Hsp90 protein CYD39_RS20170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS20180 PF12889 Protein of unknown function (DUF3829) CYD39_RS20190 PF03591 AzlC protein CYD39_RS20200 PF05336 L-rhamnose mutarotase CYD39_RS20205 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS20210 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS20215 PF06134 L-rhamnose isomerase (RhaA) CYD39_RS20220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS20220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS20225 PF12833 Helix-turn-helix domain CYD39_RS20225 PF02311 AraC-like ligand binding domain CYD39_RS20230 PF02311 AraC-like ligand binding domain CYD39_RS20230 PF12833 Helix-turn-helix domain CYD39_RS20235 PF06379 L-rhamnose-proton symport protein (RhaT) CYD39_RS20240 PF06178 Oligogalacturonate-specific porin protein (KdgM) CYD39_RS20245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYD39_RS20250 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYD39_RS20255 PF03480 Bacterial extracellular solute-binding protein, family 7 CYD39_RS20260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYD39_RS20260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYD39_RS20265 PF03475 3-alpha domain CYD39_RS20265 PF03473 MOSC domain CYD39_RS20275 PF16527 Two-component sensor protein CpxA, periplasmic domain CYD39_RS20275 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS20275 PF00672 HAMP domain CYD39_RS20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS20280 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS20280 PF00072 Response regulator receiver domain CYD39_RS20285 PF07813 LTXXQ motif family protein CYD39_RS20290 PF01545 Cation efflux family CYD39_RS20290 PF16916 Dimerisation domain of Zinc Transporter CYD39_RS20295 PF00365 Phosphofructokinase CYD39_RS20305 PF02611 CDP-diacylglycerol pyrophosphatase CYD39_RS20315 PF00294 pfkB family carbohydrate kinase CYD39_RS20325 PF00155 Aminotransferase class I and II CYD39_RS20325 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS20335 PF02611 CDP-diacylglycerol pyrophosphatase CYD39_RS20345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS20345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS20350 PF04198 Putative sugar-binding domain CYD39_RS20355 PF00005 ABC transporter CYD39_RS20360 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS20365 PF02653 Branched-chain amino acid transport system / permease component CYD39_RS20370 PF13407 Periplasmic binding protein domain CYD39_RS20375 PF01791 DeoC/LacD family aldolase CYD39_RS20380 PF03992 Antibiotic biosynthesis monooxygenase CYD39_RS20385 PF00834 Ribulose-phosphate 3 epimerase family CYD39_RS20390 PF00121 Triosephosphate isomerase CYD39_RS20395 PF07305 Protein of unknown function (DUF1454) CYD39_RS20400 PF05656 Protein of unknown function (DUF805) CYD39_RS20405 PF00175 Oxidoreductase NAD-binding domain CYD39_RS20405 PF00970 Oxidoreductase FAD-binding domain CYD39_RS20410 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CYD39_RS20415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYD39_RS20415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYD39_RS20420 PF00230 Major intrinsic protein CYD39_RS20425 PF06005 Cell division protein ZapB CYD39_RS20430 PF03737 Aldolase/RraA CYD39_RS20435 PF01040 UbiA prenyltransferase family CYD39_RS20440 PF07724 AAA domain (Cdc48 subfamily) CYD39_RS20440 PF10431 C-terminal, D2-small domain, of ClpB protein CYD39_RS20440 PF00004 ATPase family associated with various cellular activities (AAA) CYD39_RS20445 PF00227 Proteasome subunit CYD39_RS20450 PF05036 Sporulation related domain CYD39_RS20455 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS20460 PF00271 Helicase conserved C-terminal domain CYD39_RS20460 PF17764 3′ DNA-binding domain (3′BD) CYD39_RS20460 PF18074 Primosomal protein N C-terminal domain CYD39_RS20460 PF00270 DEAD/DEAH box helicase CYD39_RS20460 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYD39_RS20465 PF01197 Ribosomal protein L31 CYD39_RS20475 PF05935 Arylsulfotransferase (ASST) CYD39_RS20475 PF17425 Arylsulfotransferase Ig-like domain CYD39_RS20480 PF01340 Met Apo-repressor, MetJ CYD39_RS20485 PF01053 Cys/Met metabolism PLP-dependent enzyme CYD39_RS20490 PF00742 Homoserine dehydrogenase CYD39_RS20490 PF03447 Homoserine dehydrogenase, NAD binding domain CYD39_RS20490 PF00696 Amino acid kinase family CYD39_RS20495 PF05552 Conserved TM helix CYD39_RS20495 PF00924 Mechanosensitive ion channel CYD39_RS20510 PF02872 5'-nucleotidase, C-terminal domain CYD39_RS20510 PF17936 Bacterial Ig domain CYD39_RS20510 PF00149 Calcineurin-like phosphoesterase CYD39_RS20515 PF02219 Methylenetetrahydrofolate reductase CYD39_RS20520 PF00141 Peroxidase CYD39_RS20525 PF06940 Domain of unknown function (DUF1287) CYD39_RS20530 PF00465 Iron-containing alcohol dehydrogenase CYD39_RS20535 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYD39_RS20540 PF12833 Helix-turn-helix domain CYD39_RS20545 PF00884 Sulfatase CYD39_RS20550 PF00311 Phosphoenolpyruvate carboxylase CYD39_RS20555 PF07687 Peptidase dimerisation domain CYD39_RS20555 PF01546 Peptidase family M20/M25/M40 CYD39_RS20560 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYD39_RS20560 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYD39_RS20565 PF00696 Amino acid kinase family CYD39_RS20570 PF14698 Argininosuccinate lyase C-terminal CYD39_RS20570 PF00206 Lyase CYD39_RS20575 PF03466 LysR substrate binding domain CYD39_RS20575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS20580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD39_RS20580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYD39_RS20585 PF00440 Bacterial regulatory proteins, tetR family CYD39_RS20590 PF07226 Protein of unknown function (DUF1422) CYD39_RS20595 PF05958 tRNA (Uracil-5-)-methyltransferase CYD39_RS20600 PF07715 TonB-dependent Receptor Plug Domain CYD39_RS20600 PF00593 TonB dependent receptor CYD39_RS20605 PF01177 Asp/Glu/Hydantoin racemase CYD39_RS20635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYD39_RS20635 PF01565 FAD binding domain CYD39_RS20640 PF02237 Biotin protein ligase C terminal domain CYD39_RS20640 PF03099 Biotin/lipoate A/B protein ligase family CYD39_RS20640 PF08279 HTH domain CYD39_RS20645 PF00485 Phosphoribulokinase / Uridine kinase family CYD39_RS20675 PF03144 Elongation factor Tu domain 2 CYD39_RS20675 PF03143 Elongation factor Tu C-terminal domain CYD39_RS20675 PF00009 Elongation factor Tu GTP binding domain CYD39_RS20680 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYD39_RS20685 PF00467 KOW motif CYD39_RS20685 PF02357 Transcription termination factor nusG CYD39_RS20690 PF00298 Ribosomal protein L11, RNA binding domain CYD39_RS20690 PF03946 Ribosomal protein L11, N-terminal domain CYD39_RS20695 PF00687 Ribosomal protein L1p/L10e family CYD39_RS20700 PF00466 Ribosomal protein L10 CYD39_RS20705 PF16320 Ribosomal protein L7/L12 dimerisation domain CYD39_RS20705 PF00542 Ribosomal protein L7/L12 C-terminal domain CYD39_RS20710 PF04563 RNA polymerase beta subunit CYD39_RS20710 PF04560 RNA polymerase Rpb2, domain 7 CYD39_RS20710 PF00562 RNA polymerase Rpb2, domain 6 CYD39_RS20710 PF10385 RNA polymerase beta subunit external 1 domain CYD39_RS20710 PF04565 RNA polymerase Rpb2, domain 3 CYD39_RS20710 PF04561 RNA polymerase Rpb2, domain 2 CYD39_RS20715 PF04998 RNA polymerase Rpb1, domain 5 CYD39_RS20715 PF00623 RNA polymerase Rpb1, domain 2 CYD39_RS20715 PF04983 RNA polymerase Rpb1, domain 3 CYD39_RS20715 PF05000 RNA polymerase Rpb1, domain 4 CYD39_RS20715 PF04997 RNA polymerase Rpb1, domain 1 CYD39_RS20740 PF06968 Biotin and Thiamin Synthesis associated domain CYD39_RS20740 PF04055 Radical SAM superfamily CYD39_RS20745 PF05690 Thiazole biosynthesis protein ThiG CYD39_RS20750 PF02597 ThiS family CYD39_RS20755 PF00899 ThiF family CYD39_RS20760 PF02581 Thiamine monophosphate synthase CYD39_RS20765 PF01964 Radical SAM ThiC family CYD39_RS20765 PF13667 ThiC-associated domain CYD39_RS20770 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CYD39_RS20775 PF09297 NADH pyrophosphatase zinc ribbon domain CYD39_RS20775 PF00293 NUDIX domain CYD39_RS20780 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYD39_RS20785 PF04493 Endonuclease V CYD39_RS20790 PF04222 Protein of unknown function (DUF416) CYD39_RS20795 PF00216 Bacterial DNA-binding protein CYD39_RS20800 PF07356 Protein of unknown function (DUF1481) CYD39_RS20805 PF13801 Heavy-metal resistance CYD39_RS20810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS20810 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS20815 PF00072 Response regulator receiver domain CYD39_RS20815 PF02954 Bacterial regulatory protein, Fis family CYD39_RS20815 PF00158 Sigma-54 interaction domain CYD39_RS20820 PF02844 Phosphoribosylglycinamide synthetase, N domain CYD39_RS20820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYD39_RS20820 PF02843 Phosphoribosylglycinamide synthetase, C domain CYD39_RS20825 PF02142 MGS-like domain CYD39_RS20825 PF01808 AICARFT/IMPCHase bienzyme CYD39_RS20850 PF13673 Acetyltransferase (GNAT) domain CYD39_RS20855 PF04204 Homoserine O-succinyltransferase CYD39_RS20860 PF01274 Malate synthase CYD39_RS20865 PF00463 Isocitrate lyase family CYD39_RS20870 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CYD39_RS20880 PF01614 Bacterial transcriptional regulator CYD39_RS20880 PF09339 IclR helix-turn-helix domain CYD39_RS20885 PF02574 Homocysteine S-methyltransferase CYD39_RS20885 PF02310 B12 binding domain CYD39_RS20885 PF00809 Pterin binding enzyme CYD39_RS20885 PF02607 B12 binding domain CYD39_RS20885 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYD39_RS20905 PF02690 Na+/Pi-cotransporter CYD39_RS20910 PF03575 Peptidase family S51 CYD39_RS20920 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CYD39_RS20925 PF00849 RNA pseudouridylate synthase CYD39_RS20925 PF01479 S4 domain CYD39_RS20930 PF11656 YjbD family (DUF3811) CYD39_RS20935 PF01758 Sodium Bile acid symporter family CYD39_RS20960 PF07484 Phage Tail Collar Domain CYD39_RS20960 PF08400 Prophage tail fibre N-terminal CYD39_RS20960 PF03335 Phage tail fibre repeat CYD39_RS20985 PF00535 Glycosyl transferase family 2 CYD39_RS20990 PF04138 GtrA-like protein CYD39_RS21065 PF08765 Mor transcription activator family CYD39_RS21070 PF00696 Amino acid kinase family CYD39_RS21070 PF01842 ACT domain CYD39_RS21075 PF00342 Phosphoglucose isomerase CYD39_RS21085 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CYD39_RS21090 PF06251 Capsule biosynthesis GfcC CYD39_RS21095 PF06082 Exopolysaccharide biosynthesis protein YbjH CYD39_RS21100 PF06146 Phosphate-starvation-inducible E CYD39_RS21105 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS21110 PF14785 Maltose transport system permease protein MalF P2 domain CYD39_RS21110 PF00528 Binding-protein-dependent transport system inner membrane component CYD39_RS21115 PF01547 Bacterial extracellular solute-binding protein CYD39_RS21120 PF00005 ABC transporter CYD39_RS21120 PF17912 MalK OB fold domain CYD39_RS21125 PF02264 LamB porin CYD39_RS21130 PF07148 Maltose operon periplasmic protein precursor (MalM) CYD39_RS21135 PF04345 Chorismate lyase CYD39_RS21140 PF01040 UbiA prenyltransferase family CYD39_RS21145 PF01553 Acyltransferase CYD39_RS21150 PF01219 Prokaryotic diacylglycerol kinase CYD39_RS21155 PF01726 LexA DNA binding domain CYD39_RS21155 PF00717 Peptidase S24-like CYD39_RS21160 PF01554 MatE CYD39_RS21170 PF05532 CsbD-like CYD39_RS21175 PF01475 Ferric uptake regulator family CYD39_RS21185 PF01207 Dihydrouridine synthase (Dus) CYD39_RS21190 PF09583 Phage shock protein G (Phageshock_PspG) CYD39_RS21195 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS21195 PF00107 Zinc-binding dehydrogenase CYD39_RS21200 PF00772 DnaB-like helicase N terminal domain CYD39_RS21200 PF03796 DnaB-like helicase C terminal domain CYD39_RS21205 PF01168 Alanine racemase, N-terminal domain CYD39_RS21205 PF00842 Alanine racemase, C-terminal domain CYD39_RS21210 PF00155 Aminotransferase class I and II CYD39_RS21215 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CYD39_RS21220 PF01894 Uncharacterised protein family UPF0047 CYD39_RS21225 PF04237 YjbR CYD39_RS21240 PF17755 UvrA DNA-binding domain CYD39_RS21240 PF17760 UvrA interaction domain CYD39_RS21240 PF00005 ABC transporter CYD39_RS21245 PF00436 Single-strand binding protein family CYD39_RS21280 PF00005 ABC transporter CYD39_RS21280 PF00664 ABC transporter transmembrane region CYD39_RS21285 PF15940 Family of unknown function CYD39_RS21290 PF00563 EAL domain CYD39_RS21290 PF12792 CSS motif domain associated with EAL CYD39_RS21295 PF12833 Helix-turn-helix domain CYD39_RS21300 PF09278 MerR, DNA binding CYD39_RS21300 PF00376 MerR family regulatory protein CYD39_RS21310 PF00860 Permease family CYD39_RS21315 PF00999 Sodium/hydrogen exchanger family CYD39_RS21320 PF03466 LysR substrate binding domain CYD39_RS21320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS21325 PF03788 LrgA family CYD39_RS21330 PF04172 LrgB-like family CYD39_RS21335 PF00474 Sodium:solute symporter family CYD39_RS21340 PF04341 Protein of unknown function, DUF485 CYD39_RS21345 PF00501 AMP-binding enzyme CYD39_RS21345 PF16177 Acetyl-coenzyme A synthetase N-terminus CYD39_RS21345 PF13193 AMP-binding enzyme C-terminal domain CYD39_RS21350 PF02335 Cytochrome c552 CYD39_RS21355 PF13435 Cytochrome c554 and c-prime CYD39_RS21355 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CYD39_RS21360 PF13247 4Fe-4S dicluster domain CYD39_RS21360 PF00037 4Fe-4S binding domain CYD39_RS21365 PF03916 Polysulphide reductase, NrfD CYD39_RS21370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CYD39_RS21370 PF01578 Cytochrome C assembly protein CYD39_RS21380 PF00375 Sodium:dicarboxylate symporter family CYD39_RS21390 PF08238 Sel1 repeat CYD39_RS21405 PF00583 Acetyltransferase (GNAT) family CYD39_RS21410 PF06983 3-demethylubiquinone-9 3-methyltransferase CYD39_RS21415 PF08274 PhnA Zinc-Ribbon CYD39_RS21415 PF03831 PhnA domain CYD39_RS21420 PF08946 Osmosensory transporter coiled coil CYD39_RS21420 PF00083 Sugar (and other) transporter CYD39_RS21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS21430 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS21435 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS21435 PF00072 Response regulator receiver domain CYD39_RS21440 PF00884 Sulfatase CYD39_RS21440 PF08019 Phosphoethanolamine transferase EptA/EptB CYD39_RS21445 PF13520 Amino acid permease CYD39_RS21450 PF12833 Helix-turn-helix domain CYD39_RS21455 PF01276 Orn/Lys/Arg decarboxylase, major domain CYD39_RS21455 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYD39_RS21455 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYD39_RS21460 PF12833 Helix-turn-helix domain CYD39_RS21465 PF11975 Family 4 glycosyl hydrolase C-terminal domain CYD39_RS21465 PF02056 Family 4 glycosyl hydrolase CYD39_RS21475 PF05683 Fumarase C-terminus CYD39_RS21475 PF05681 Fumarate hydratase (Fumerase) CYD39_RS21480 PF03605 Anaerobic c4-dicarboxylate membrane transporter CYD39_RS21490 PF00072 Response regulator receiver domain CYD39_RS21495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CYD39_RS21495 PF00989 PAS fold CYD39_RS21495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS21495 PF17203 Single cache domain 3 CYD39_RS21500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYD39_RS21500 PF00384 Molybdopterin oxidoreductase CYD39_RS21500 PF01568 Molydopterin dinucleotide binding domain CYD39_RS21505 PF13247 4Fe-4S dicluster domain CYD39_RS21505 PF12800 4Fe-4S binding domain CYD39_RS21510 PF04976 DMSO reductase anchor subunit (DmsC) CYD39_RS21515 PF02613 Nitrate reductase delta subunit CYD39_RS21525 PF06977 SdiA-regulated CYD39_RS21540 PF00072 Response regulator receiver domain CYD39_RS21540 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS21545 PF12833 Helix-turn-helix domain CYD39_RS21575 PF01569 PAP2 superfamily CYD39_RS21585 PF03610 PTS system fructose IIA component CYD39_RS21585 PF03830 PTS system sorbose subfamily IIB component CYD39_RS21590 PF03830 PTS system sorbose subfamily IIB component CYD39_RS21600 PF03613 PTS system mannose/fructose/sorbose family IID component CYD39_RS21605 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS21605 PF00107 Zinc-binding dehydrogenase CYD39_RS21610 PF01380 SIS domain CYD39_RS21615 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS21615 PF00107 Zinc-binding dehydrogenase CYD39_RS21620 PF00834 Ribulose-phosphate 3 epimerase family CYD39_RS21625 PF00874 PRD domain CYD39_RS21625 PF03610 PTS system fructose IIA component CYD39_RS21625 PF00158 Sigma-54 interaction domain CYD39_RS21650 PF11412 Disulphide bond corrector protein DsbC CYD39_RS21650 PF02683 Cytochrome C biogenesis protein transmembrane region CYD39_RS21655 PF03091 CutA1 divalent ion tolerance protein CYD39_RS21660 PF03605 Anaerobic c4-dicarboxylate membrane transporter CYD39_RS21665 PF00206 Lyase CYD39_RS21665 PF10415 Fumarase C C-terminus CYD39_RS21670 PF04186 FxsA cytoplasmic membrane protein CYD39_RS21675 PF13520 Amino acid permease CYD39_RS21680 PF00166 Chaperonin 10 Kd subunit CYD39_RS21685 PF00118 TCP-1/cpn60 chaperonin family CYD39_RS21690 PF13698 Domain of unknown function (DUF4156) CYD39_RS21695 PF15922 YjeJ-like CYD39_RS21700 PF04055 Radical SAM superfamily CYD39_RS21705 PF01132 Elongation factor P (EF-P) OB domain CYD39_RS21705 PF08207 Elongation factor P (EF-P) KOW-like domain CYD39_RS21705 PF09285 Elongation factor P, C-terminal CYD39_RS21710 PF08085 Entericidin EcnA/B family CYD39_RS21715 PF08085 Entericidin EcnA/B family CYD39_RS21720 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS21725 PF00893 Small Multidrug Resistance protein CYD39_RS21730 PF08212 Lipocalin-like domain CYD39_RS21735 PF02313 Fumarate reductase subunit D CYD39_RS21740 PF02300 Fumarate reductase subunit C CYD39_RS21745 PF13085 2Fe-2S iron-sulfur cluster binding domain CYD39_RS21745 PF13183 4Fe-4S dicluster domain CYD39_RS21750 PF00890 FAD binding domain CYD39_RS21750 PF02910 Fumarate reductase flavoprotein C-term CYD39_RS21755 PF00152 tRNA synthetases class II (D, K and N) CYD39_RS21760 PF13520 Amino acid permease CYD39_RS21765 PF10840 Protein of unknown function (DUF2645) CYD39_RS21770 PF00924 Mechanosensitive ion channel CYD39_RS21770 PF12795 Mechanosensitive ion channel porin domain CYD39_RS21770 PF12794 Mechanosensitive ion channel inner membrane domain 1 CYD39_RS21775 PF02666 Phosphatidylserine decarboxylase CYD39_RS21780 PF03193 RsgA GTPase CYD39_RS21785 PF00929 Exonuclease CYD39_RS21790 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYD39_RS21810 PF08331 Domain of unknown function (DUF1730) CYD39_RS21815 PF03853 YjeF-related protein N-terminus CYD39_RS21815 PF01256 Carbohydrate kinase CYD39_RS21820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYD39_RS21825 PF01520 N-acetylmuramoyl-L-alanine amidase CYD39_RS21830 PF08676 MutL C terminal dimerisation domain CYD39_RS21830 PF01119 DNA mismatch repair protein, C-terminal domain CYD39_RS21840 PF17209 Hfq protein CYD39_RS21845 PF01926 50S ribosome-binding GTPase CYD39_RS21845 PF13167 GTP-binding GTPase N-terminal CYD39_RS21845 PF16360 GTP-binding GTPase Middle Region CYD39_RS21850 PF01145 SPFH domain / Band 7 family CYD39_RS21850 PF12221 Bacterial membrane protein N terminal CYD39_RS21855 PF01145 SPFH domain / Band 7 family CYD39_RS21860 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CYD39_RS21865 PF00709 Adenylosuccinate synthetase CYD39_RS21870 PF02082 Transcriptional regulator CYD39_RS21875 PF00575 S1 RNA binding domain CYD39_RS21875 PF00773 RNB domain CYD39_RS21875 PF17876 Cold shock domain CYD39_RS21875 PF08206 Ribonuclease B OB domain CYD39_RS21875 PF08461 Ribonuclease R winged-helix domain CYD39_RS21880 PF00588 SpoU rRNA Methylase family CYD39_RS21880 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYD39_RS21885 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CYD39_RS21890 PF04012 PspA/IM30 family CYD39_RS21895 PF10679 Protein of unknown function (DUF2491) CYD39_RS21900 PF03994 Domain of Unknown Function (DUF350) CYD39_RS21905 PF06693 Protein of unknown function (DUF1190) CYD39_RS21910 PF03738 Glutathionylspermidine synthase preATP-grasp CYD39_RS21915 PF02770 Acyl-CoA dehydrogenase, middle domain CYD39_RS21915 PF18158 Adaptive response protein AidB N-terminal domain CYD39_RS21915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYD39_RS21920 PF07338 Protein of unknown function (DUF1471) CYD39_RS21925 PF07338 Protein of unknown function (DUF1471) CYD39_RS21930 PF00326 Prolyl oligopeptidase family CYD39_RS21935 PF08220 DeoR-like helix-turn-helix domain CYD39_RS21935 PF00455 DeoR C terminal sensor domain CYD39_RS21945 PF03611 PTS system sugar-specific permease component CYD39_RS21950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYD39_RS21955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS21960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYD39_RS21965 PF01261 Xylose isomerase-like TIM barrel CYD39_RS21970 PF00596 Class II Aldolase and Adducin N-terminal domain CYD39_RS21975 PF07274 Protein of unknown function (DUF1440) CYD39_RS21980 PF07338 Protein of unknown function (DUF1471) CYD39_RS21985 PF01250 Ribosomal protein S6 CYD39_RS21990 PF00436 Single-strand binding protein family CYD39_RS21995 PF01084 Ribosomal protein S18 CYD39_RS22000 PF03948 Ribosomal protein L9, C-terminal domain CYD39_RS22000 PF01281 Ribosomal protein L9, N-terminal domain CYD39_RS22010 PF08525 Opacity-associated protein A N-terminal motif CYD39_RS22010 PF04225 Opacity-associated protein A LysM-like domain CYD39_RS22015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYD39_RS22015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CYD39_RS22020 PF00324 Amino acid permease CYD39_RS22025 PF04405 Domain of Unknown function (DUF542) CYD39_RS22025 PF01814 Hemerythrin HHE cation binding domain CYD39_RS22030 PF00892 EamA-like transporter family CYD39_RS22035 PF05368 NmrA-like family CYD39_RS22040 PF01638 HxlR-like helix-turn-helix CYD39_RS22045 PF02872 5'-nucleotidase, C-terminal domain CYD39_RS22045 PF00149 Calcineurin-like phosphoesterase CYD39_RS22050 PF00459 Inositol monophosphatase family CYD39_RS22055 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CYD39_RS22060 PF06526 Protein of unknown function (DUF1107) CYD39_RS22065 PF01595 Cyclin M transmembrane N-terminal domain CYD39_RS22065 PF03471 Transporter associated domain CYD39_RS22065 PF00571 CBS domain CYD39_RS22070 PF01625 Peptide methionine sulfoxide reductase CYD39_RS22075 PF17243 POTRA domain TamA domain 1 CYD39_RS22075 PF01103 Surface antigen CYD39_RS22075 PF07244 Surface antigen variable number repeat CYD39_RS22080 PF04357 TamB, inner membrane protein subunit of TAM complex CYD39_RS22085 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CYD39_RS22090 PF07690 Major Facilitator Superfamily CYD39_RS22095 PF01979 Amidohydrolase family CYD39_RS22100 PF00719 Inorganic pyrophosphatase CYD39_RS22105 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CYD39_RS22110 PF02875 Mur ligase family, glutamate ligase domain CYD39_RS22110 PF01225 Mur ligase family, catalytic domain CYD39_RS22110 PF08245 Mur ligase middle domain CYD39_RS22115 PF02685 Glucokinase CYD39_RS22115 PF01418 Helix-turn-helix domain, rpiR family CYD39_RS22115 PF01380 SIS domain CYD39_RS22120 PF00083 Sugar (and other) transporter CYD39_RS22130 PF00083 Sugar (and other) transporter CYD39_RS22135 PF04962 KduI/IolB family CYD39_RS22140 PF00171 Aldehyde dehydrogenase family CYD39_RS22155 PF01261 Xylose isomerase-like TIM barrel CYD39_RS22160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS22160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYD39_RS22165 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CYD39_RS22170 PF01261 Xylose isomerase-like TIM barrel CYD39_RS22175 PF07690 Major Facilitator Superfamily CYD39_RS22180 PF00294 pfkB family carbohydrate kinase CYD39_RS22185 PF00205 Thiamine pyrophosphate enzyme, central domain CYD39_RS22185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYD39_RS22185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYD39_RS22190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYD39_RS22190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYD39_RS22195 PF07690 Major Facilitator Superfamily CYD39_RS22205 PF01261 Xylose isomerase-like TIM barrel CYD39_RS22210 PF04751 Protein of unknown function (DUF615) CYD39_RS22215 PF01523 Putative modulator of DNA gyrase CYD39_RS22220 PF07361 Cytochrome b562 CYD39_RS22250 PF01979 Amidohydrolase family CYD39_RS22255 PF03841 L-seryl-tRNA selenium transferase CYD39_RS22260 PF07071 KDGP aldolase CYD39_RS22265 PF08279 HTH domain CYD39_RS22265 PF05043 Mga helix-turn-helix domain CYD39_RS22265 PF00874 PRD domain CYD39_RS22265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYD39_RS22270 PF01850 PIN domain CYD39_RS22275 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CYD39_RS22285 PF03477 ATP cone domain CYD39_RS22285 PF13597 Anaerobic ribonucleoside-triphosphate reductase CYD39_RS22290 PF11941 Domain of unknown function (DUF3459) CYD39_RS22290 PF00128 Alpha amylase, catalytic domain CYD39_RS22295 PF00367 phosphotransferase system, EIIB CYD39_RS22295 PF02378 Phosphotransferase system, EIIC CYD39_RS22300 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS22305 PF17059 MgtA leader peptide CYD39_RS22310 PF00690 Cation transporter/ATPase, N-terminus CYD39_RS22310 PF00689 Cation transporting ATPase, C-terminus CYD39_RS22320 PF01042 Endoribonuclease L-PSP CYD39_RS22325 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CYD39_RS22325 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CYD39_RS22330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYD39_RS22330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYD39_RS22335 PF08052 PyrBI operon leader peptide CYD39_RS22345 PF01316 Arginine repressor, DNA binding domain CYD39_RS22345 PF02863 Arginine repressor, C-terminal domain CYD39_RS22350 PF03606 C4-dicarboxylate anaerobic carrier CYD39_RS22355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYD39_RS22355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYD39_RS22360 PF00696 Amino acid kinase family CYD39_RS22370 PF04074 YhcH/YjgK/YiaL CYD39_RS22375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYD39_RS22375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYD39_RS22380 PF06877 Regulator of ribonuclease activity B CYD39_RS22385 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CYD39_RS22390 PF12276 Protein of unknown function (DUF3617) CYD39_RS22395 PF00583 Acetyltransferase (GNAT) family CYD39_RS22400 PF05987 Bacterial protein of unknown function (DUF898) CYD39_RS22405 PF00133 tRNA synthetases class I (I, L, M and V) CYD39_RS22405 PF10458 Valyl tRNA synthetase tRNA binding arm CYD39_RS22405 PF08264 Anticodon-binding domain of tRNA CYD39_RS22410 PF04364 DNA polymerase III chi subunit, HolC CYD39_RS22415 PF00883 Cytosol aminopeptidase family, catalytic domain CYD39_RS22415 PF02789 Cytosol aminopeptidase family, N-terminal domain CYD39_RS22420 PF03739 Lipopolysaccharide export system permease LptF/LptG CYD39_RS22425 PF03739 Lipopolysaccharide export system permease LptF/LptG CYD39_RS22430 PF00356 Bacterial regulatory proteins, lacI family CYD39_RS22435 PF02447 GntP family permease CYD39_RS22440 PF00106 short chain dehydrogenase CYD39_RS22445 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS22445 PF00107 Zinc-binding dehydrogenase CYD39_RS22450 PF01202 Shikimate kinase CYD39_RS22455 PF08240 Alcohol dehydrogenase GroES-like domain CYD39_RS22455 PF00107 Zinc-binding dehydrogenase CYD39_RS22465 PF13356 Arm DNA-binding domain CYD39_RS22465 PF00589 Phage integrase family CYD39_RS22560 PF02899 Phage integrase, N-terminal SAM-like domain CYD39_RS22560 PF00589 Phage integrase family CYD39_RS22570 PF00293 NUDIX domain CYD39_RS22625 PF07804 HipA-like C-terminal domain CYD39_RS22625 PF13657 HipA N-terminal domain CYD39_RS22645 PF13676 TIR domain CYD39_RS22650 PF02384 N-6 DNA Methylase CYD39_RS22655 PF12161 HsdM N-terminal domain CYD39_RS22655 PF02384 N-6 DNA Methylase CYD39_RS22665 PF18766 SWI2/SNF2 ATPase CYD39_RS22665 PF11867 Domain of unknown function (DUF3387) CYD39_RS22665 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CYD39_RS22675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYD39_RS22685 PF01709 Transcriptional regulator CYD39_RS22690 PF13847 Methyltransferase domain CYD39_RS22695 PF09857 Putative toxin of bacterial toxin-antitoxin pair CYD39_RS22710 PF03625 Domain of unknown function DUF302 CYD39_RS22710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYD39_RS22715 PF01738 Dienelactone hydrolase family CYD39_RS22720 PF00392 Bacterial regulatory proteins, gntR family CYD39_RS22720 PF07729 FCD domain CYD39_RS22725 PF00579 tRNA synthetases class I (W and Y) CYD39_RS22735 PF01177 Asp/Glu/Hydantoin racemase CYD39_RS22740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYD39_RS22740 PF03466 LysR substrate binding domain CYD39_RS22745 PF01979 Amidohydrolase family CYD39_RS22750 PF07670 Nucleoside recognition CYD39_RS22755 PF07670 Nucleoside recognition CYD39_RS22760 PF06779 Uncharacterised MFS-type transporter YbfB CYD39_RS22765 PF04286 Protein of unknown function (DUF445) CYD39_RS22770 PF07690 Major Facilitator Superfamily CYD39_RS22775 PF04754 Putative transposase, YhgA-like CYD39_RS22780 PF00171 Aldehyde dehydrogenase family CYD39_RS22800 PF01810 LysE type translocator CYD39_RS22805 PF12833 Helix-turn-helix domain CYD39_RS22805 PF02311 AraC-like ligand binding domain CYD39_RS22810 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYD39_RS22810 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYD39_RS22815 PF04328 Selenoprotein, putative CYD39_RS22820 PF02554 Carbon starvation protein CstA CYD39_RS22820 PF13722 5TM C-terminal transporter carbon starvation CstA CYD39_RS22825 PF02203 Tar ligand binding domain homologue CYD39_RS22825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYD39_RS22825 PF00672 HAMP domain CYD39_RS22830 PF00884 Sulfatase CYD39_RS22835 PF10696 Protein of unknown function (DUF2501) CYD39_RS22840 PF01695 IstB-like ATP binding protein CYD39_RS22845 PF17948 DnaT DNA-binding domain CYD39_RS22850 PF12821 Threonine/Serine exporter, ThrE CYD39_RS22855 PF06738 Putative threonine/serine exporter CYD39_RS22860 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS22865 PF00196 Bacterial regulatory proteins, luxR family CYD39_RS22870 PF04073 Aminoacyl-tRNA editing domain CYD39_RS22875 PF06276 Ferric iron reductase FhuF-like transporter CYD39_RS22875 PF11575 FhuF 2Fe-2S C-terminal domain CYD39_RS22880 PF00990 Diguanylate cyclase, GGDEF domain CYD39_RS22880 PF05230 MASE2 domain CYD39_RS22885 PF07256 Protein of unknown function (DUF1435) CYD39_RS22905 PF08468 Methyltransferase small domain N-terminal CYD39_RS22905 PF05175 Methyltransferase small domain CYD39_RS22910 PF03603 DNA polymerase III psi subunit CYD39_RS22915 PF00583 Acetyltransferase (GNAT) family CYD39_RS22920 PF13419 Haloacid dehalogenase-like hydrolase CYD39_RS22925 PF03144 Elongation factor Tu domain 2 CYD39_RS22925 PF00009 Elongation factor Tu GTP binding domain CYD39_RS22925 PF16658 Class II release factor RF3, C-terminal domain CYD39_RS22930 PF04972 BON domain CYD39_RS22935 PF07043 Protein of unknown function (DUF1328) CYD39_RS22940 PF01734 Patatin-like phospholipase CYD39_RS22945 PF01026 TatD related DNase CYD39_RS22950 PF04055 Radical SAM superfamily CYD39_RS22955 PF11230 Protein of unknown function (DUF3029) CYD39_RS22960 PF01791 DeoC/LacD family aldolase CYD39_RS22965 PF02885 Glycosyl transferase family, helical bundle domain CYD39_RS22965 PF00591 Glycosyl transferase family, a/b domain CYD39_RS22965 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CYD39_RS22970 PF01676 Metalloenzyme superfamily CYD39_RS22975 PF01048 Phosphorylase superfamily CYD39_RS22985 PF00577 Outer membrane usher protein CYD39_RS22985 PF13953 PapC C-terminal domain CYD39_RS22985 PF13954 PapC N-terminal domain CYD39_RS22990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS22995 PF06551 Protein of unknown function (DUF1120) CYD39_RS23005 PF10437 Bacterial lipoate protein ligase C-terminus CYD39_RS23005 PF03099 Biotin/lipoate A/B protein ligase family CYD39_RS23010 PF10144 Bacterial virulence factor haemolysin CYD39_RS23015 PF18429 Domain of unknown function (DUF5609) CYD39_RS23020 PF18073 Rubredoxin metal binding domain CYD39_RS23025 PF01381 Helix-turn-helix CYD39_RS23025 PF13521 AAA domain CYD39_RS23030 PF12848 ABC transporter CYD39_RS23030 PF00005 ABC transporter CYD39_RS23035 PF14718 Soluble lytic murein transglycosylase L domain CYD39_RS23035 PF01464 Transglycosylase SLT domain CYD39_RS23040 PF01371 Trp repressor protein CYD39_RS23045 PF01931 Protein of unknown function DUF84 CYD39_RS23050 PF00300 Histidine phosphatase superfamily (branch 1) CYD39_RS23055 PF06445 GyrI-like small molecule binding domain CYD39_RS23055 PF12833 Helix-turn-helix domain CYD39_RS23060 PF05981 CreA protein CYD39_RS23065 PF00072 Response regulator receiver domain CYD39_RS23065 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS23070 PF00672 HAMP domain CYD39_RS23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYD39_RS23070 PF00512 His Kinase A (phospho-acceptor) domain CYD39_RS23075 PF06123 Inner membrane protein CreD CYD39_RS23090 PF13953 PapC C-terminal domain CYD39_RS23090 PF00577 Outer membrane usher protein CYD39_RS23090 PF13954 PapC N-terminal domain CYD39_RS23095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYD39_RS23095 PF02753 Pili assembly chaperone PapD, C-terminal domain CYD39_RS23105 PF15977 Winged helix-turn-helix DNA binding CYD39_RS23115 PF00486 Transcriptional regulatory protein, C terminal CYD39_RS23115 PF00072 Response regulator receiver domain CYD39_RS23125 PF00588 SpoU rRNA Methylase family