        thrB NONE
        thrC    5012 ..    5069 +  -8.4  -2.91395   AAGCTAATGATGACC CGCCAGTAACCATTGCGCCCGGT-GGCG ATGT CGCTTACCGGGC-CTATGGGTGGTGTCG ATTTGTAGGCCGGAT  65 17
         tal    8599 ..    8609 +  -5.4  -2.68487   AAAACTGGAAAAAAT                 GATC GGC GATC                 TGCTGTAATCATTAA  50 7
CYD39_RS00040    9392 ..    9412 +  -3.9   -2.5934   AGTGCGCCTCGCCGA            TTGGCAGAA TAG TGCGGCCAA            ATTGCTCGTTTAGCA  44 99
        dnaK   13538 ..   13564 +   -18   -2.9518   GGGTAATTACTGGCA         CGGGCGAAGAGG TTT CCTCTCCGCCCG         TGTATGCATGTTAAG 100 54
        dnaJ   14761 ..   14780 + -11.4  -5.29782   TTGTATTTTTCTTCA            GCCCGGGT GTAT ATCCGGGC             TTTTTTCTGCCTGTA 100 52
CYD39_RS00070   16061 ..   16073 +  -4.9   -3.6106   CCTTGTGTTAATTAT                TCATT TAT AATGA                TTTCGGAGTGTTAAA  57 124
CYD39_RS00075   16452 ..   16467 +    -9  -4.16146   TCATTCGTAGTATCA              GGCTCA TCCG TGAGCC               TTTTACGCGTCTTTT  82 44
CYD39_RS00090   20009 ..   20026 + -14.1  -4.36914   GGCTTCATGATTCAA             GCCCCGG TTTA CCGGGGC              TTTTCTCCACCAGGG 100 67
CYD39_RS00095   23095 ..   23124 + -15.9  -4.83169   CTGGACTATTAGTTT       GAGATTCGAAGGC GCGT GCTTTCGAATCTC        TTTTTCTGCGCCCCT 100 64
CYD39_RS00100   24025 ..   24035 +  -4.6  -3.15078   CGGCGCTCGGAAAAC                 TGCC AGT GGCG                 TATTAATGCGCTATC  50 9
CYD39_RS00105   25008 ..   25026 +  -5.3  -5.69473   TTTAGCATGGTTTAT             TCCTGAT TCCTT ATCGGGA             TTTTTTTCTCGTCTG 100 20
CYD39_RS00110 NONE
CYD39_RS00115 NONE
CYD39_RS00120 NONE
CYD39_RS00125 NONE
CYD39_RS00130 NONE
CYD39_RS00135   31226 ..   31245 + -11.4  -3.68261   ACCTTTTTTTCAGGC            GCCTTCCG ATAG CGGGAGGC             TTTCCGATCTTATCG  87 40
CYD39_RS00140 NONE
CYD39_RS00145   32924 ..   32938 +  -5.8   -4.2338   CCTTTAGCACTTTTT               TATCAT GTA ATGATA               TTATTTCTCTTAATG  71 502
CYD39_RS00155   34447 ..   34473 +  -5.2  -3.90163   TGCTATATATTTATA         CTCTTCTTTTTT TAA AGAAGAGGGGAG         GTTTTTCTTTTCATT  61 102
CYD39_RS00165   37064 ..   37094 + -14.8  -3.49938   TTGCATAACTAAGTA       TGTTATGCGGCCGG TTA TCGACCGCATAACA       TTATGGCTTATTTGC 100 33
CYD39_RS00180   41665 ..   41700 + -11.2  -4.86731   CACTTAGGGCGATGC    CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC    TTTTATTTCAGGGAA 100 69
CYD39_RS00185   42917 ..   42935 +  -3.9  -3.81948   TTTGTTTGAAGGTGG             TATTCGC AGGGA GTGAATA             TGTTTTCTCACATTA  55 32
CYD39_RS00190   44244 ..   44301 +  -7.2  -2.98447   TCGGACGGCTTAAAA ATCCAGAGTATTAATTTTCGTGGTCCC CATGA GGGGCGATGAGA-TTAATACACTGGAG ATTTATCATGAATAC  59 87
CYD39_RS00195   46059 ..   46076 +  -9.1  -3.56704   GATTGCACTAAAAAA             GTCCGGC GTAA GTCGGAC              TTCATTTCGTAAAAA  73 60
        nhaA   47375 ..   47386 +  -5.8  -2.53213   CGAAGGAAAGGGGGA                GCGA TGTA TCGC                 TCCCTTGCGACATTG  49 47
        nhaR   48333 ..   48363 + -18.4  -2.83747   TACCTACCGTAATAC       TTCCGGCTGCGG AACTAGC CCGCAGCCGGAA       TCATTCTACAAGTTC 100 44
CYD39_RS00225 NONE
        ribF   53795 ..   53816 +  -2.1  -3.51934   GTTTTTTGGGCTAGC           CGGGCAGGT GTAA GCCTGACGG            TGTTTATCAAACCGA  47 13
        ileS NONE
CYD39_RS00240   57196 ..   57214 +  -7.4   -4.3898   GCATAAGCGTAAATA             CCGGATGG CGC TTATCCGG             TTTTGTAGGCCTGAT  77 35
        fkpB NONE
        ispH   58882 ..   58916 + -12.4   -3.4252   CTTTTTGCTATTCAT     CTGAAAAACCAGCA CAATCGT TGCTGGTTTTTTAG     TTGTAATGCCTACAG  93 164
CYD39_RS00255 NONE
        rihC   61141 ..   61172 +  -7.2  -4.40963   TCTCCGGCCTGCCCA      CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG       TTATTTTTCACGCCT  79 85
        citC NONE
        citD NONE
        citE   70836 ..   70846 +  -4.6  -3.20227   AAAGTGGTGGCGCTG                 TCGG CTT CCGG                 TATTCGTGATTAAGG  50 2
        citF NONE
        citX NONE
        citG   73856 ..   73879 + -12.6  -3.45743   CATTCTCTCCAGCAA          TGATTCATCC TGCG GGATGAATCA           TGTCTTTTACTGATA  93 54
        dapB   74883 ..   74901 + -11.8  -5.55855   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTTTGCC 100 80
        carA NONE
        carB   80140 ..   80159 + -10.8  -5.84432   AATATAATGTTGAAA            GGGTTTCT GTAA AGAAACCC             TTTTTTTATCTTGTG 100 79
        caiF   80858 ..   80883 +  -9.7  -4.64676   ATTTTGGCTTCACGT         CCG-TCGTGCCT TTC AGGCGCGGTCGG         TTTTCTTCGACCTGC  91 128
CYD39_RS00385 NONE
CYD39_RS00390 NONE
CYD39_RS00395 NONE
        fixX   91882 ..   91940 + -14.4  -2.57931   TAGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA  87 63
CYD39_RS00405 NONE
CYD39_RS00410   93739 ..   93784 +    -6  -3.53091   CGGATGCCTGAACAG GCAGGGACGCCGGAAAACGT CGAAAT ACGTTCGCCCGTGTTCCCGC TTTCCCCACCGCGCT  60 114
CYD39_RS00415   94519 ..   94533 +  -2.7  -3.38535   TTGTGACGGAACATG               GCACC TTGCT GGCGC               TCTCTTATTATTTCA  46 186
CYD39_RS00425   97786 ..   97822 +  -9.3  -3.61988   GCTTCAACAATTACG    CCTACTGGGCCAGGCTC TAA GTACCTGACCCATTAGG    TTAATTTATGCGTCG  75 153
        kefF NONE
        kefC  100773 ..  100789 +  -2.3  -2.80195   ATAGTGGCGGCAATT              TTTTTTG TAT CAGGAAA              TAATTAATGATCAGT  40 201
        folA  101280 ..  101318 + -13.3  -3.02263   AACGTCGTTAACGCT  GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC  TCTTGAGCCAGATGT  86 30
        djlA  109201 ..  109228 + -13.4  -2.72471   TCAAGTGATTGAATT        GCCGGATGCGGC TAGC GCCTTATCCGGC         CTTGTATCCTGAACA  85 33
CYD39_RS00480  110409 ..  110444 + -16.4  -3.20382   GTGGGATGAAAATTA    TGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACG    TTAATGAATGTAGGC 100 10
CYD39_RS00510  118955 ..  118974 +  -6.4  -3.12521   TGCTCCTGCGACAAT            CGCGCA GTCAGCTA TGCGCG             TCTGGTTTTGCTGAC  56 371
CYD39_RS00525  120045 ..  120065 +  -3.3  -2.89797   TGCCCGTAATAGGCT            TTTGCGC CGTGTTT GCGTAAA            TAGTGTTTATCCAGC  44 50
        araC  125353 ..  125365 +  -4.8  -3.15544   AGGGGGACGGGATAA                GCAG AATCC CTGC                TTCATCACGCTGACG  52 108
CYD39_RS00550  126224 ..  126235 +  -7.2  -2.53213   ATTTGATGCCCAATA                GCGC TGAG GCGC                 TGGCTTGACCGCTTA  53 93
        sgrT  131568 ..  131590 + -16.4  -5.95539   AGCCTAAAATCACCC           GCCAGCAGAT AAT ATCTGCTGGC           TTTTTTTATTTCGGC 100 87
        leuO  138305 ..  138341 + -16.2  -4.65838   AAGCGATAAAACCGG    GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC    TTTTTAGCGTATATA 100 32
        ilvI NONE
        ilvN  140962 ..  140987 +  -7.6  -5.75945   CCAACAGGAATTATC         GCCCAACC CAATATCACC GGTTGGGC          TTTTTTTTGCGAAAT 100 149
         cra  142491 ..  142508 +  -3.4  -4.07885   ACTTTATATTTTTCT             CGGATT ATATTG AGTCCG              TTTTAAACGGCGGTG  57 390
CYD39_RS00625 NONE
        rsmH NONE
        ftsL NONE
CYD39_RS00640 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG  153789 ..  153806 +  -3.3  -3.01422   GTCGCCAGTGAAGTC             AG-CCGGG TTG CCCGGACA             TAATTTGTGGCGGTG  45 5
        murC NONE
CYD39_RS00680 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ  159669 ..  159690 +  -6.7  -3.09208   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTAATTT  58 75
        lpxC  160662 ..  160705 + -10.3  -5.90981   CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC 100 50
        secM  161443 ..  161459 + -11.5  -2.79175   TTTACTTTATTTGTA              GCTCCGC GGC GCGGGGC              ATTTGAGACTTTATT  77 55
        secA  164294 ..  164311 + -12.7  -5.28176   GAACACAGATAAAAA             GGCGCAG GCGA CTGCGCC              TTTTTTATGGATGCA 100 139
        mutT  164725 ..  164755 +  -5.3    -3.409   CGCCAATTTGCGTCT       TAGTGGGGGATCG CAACA CGATCCCCATCGA       TCTTATTAGCGATTT  54 23
CYD39_RS00725  167239 ..  167252 +  -8.1   -3.7108   GGTGAGGGGATTCAG               GCTGG CAAG CCAGC                TTTCAATCTGGGCGT  68 487
CYD39_RS00745  169614 ..  169637 + -14.6  -3.32963   AGCCTCTAATATTCT          GGCTGGCGTA AATG TGCGCCAGCC           TTATCCCATCCCGCT 100 32
        ampD NONE
        ampE  175279 ..  175302 +  -9.6   -3.4252   TGGGGCATTAGTGTA          GCGTT-GTGCC GAT GGCGCTAACGC          TTATGCTGCCTACAA  75 25
        pdhR  180681 ..  180694 +  -5.3  -3.72695   ACCTGTCTTATTAAG               CTTTC TGAC GAAAG                TTTAATGGGACAGGT  59 115
        aceE NONE
        aceF  185326 ..  185343 + -14.1  -5.88471   TGATGTAATGAAAAA             GCCGGCC CGAC GGCCGGC              TTTTTTTTGATAATC 100 33
        lpdA  186982 ..  186997 + -10.4  -5.64274   ACCCGATACAAAAAA              GCGGCT TTAC AGCCGC               TTTTTTTATGCATGG 100 64
CYD39_RS00815  187834 ..  187853 +  -4.9  -4.67234   ACGTCGCCTGCTTTG            GTTGGCC AGTACA GGCCATC             TTTTTGGCCTTCGCT  71 343
        acnB  192973 ..  192994 + -17.3  -4.56597   GCGGTATAAAAGTGA           CTGGCCCGG ATTT CCGGGCCAG            TTTTTACCGCGAAGA 100 32
CYD39_RS00840 NONE
CYD39_RS00845  195531 ..  195547 +  -6.6  -4.98857   ACGTCACTGCCAGAT              TTTCCG CAGGC CGGAAA              TTTTTCTGCTTAAAT  86 84
CYD39_RS00855 NONE
CYD39_RS00860  197830 ..  197844 +  -2.7  -4.25538   CGGGCCCGGATTTCC               GGGCC CGAAT GGCGC               TTCTTATTTATTATT  58 47
CYD39_RS00875  199760 ..  199776 + -13.7   -5.4505   TCACCACACATTCCA              GCCGGGA GTA TCCCGGC              TTTTTTATTGCAGAA 100 107
CYD39_RS00880 NONE
CYD39_RS00885 NONE
CYD39_RS00890 NONE
CYD39_RS00895  204380 ..  204398 +  -6.6  -3.53012   CAGATATGGCTCTTA             TCGAGGTG CGC CACCACGG             TTTCCGGCAGCGGGC  60 521
        cueO  207906 ..  207925 +   -15  -3.35358   CGCCACCCGGCATAA            TGCCCGGC ATAC GCCGGGCA             TTAATGGTTATTTCG 100 76
CYD39_RS00925  211364 ..  211376 +  -5.5  -4.56597   AGCGCGTCCAGACGT                TGCTC TTC GGGCA                TTTTTCCCAACAGCG  73 324
CYD39_RS00935  212813 ..  212826 +  -3.1    -3.794   AAAAACAAGGAGATC               GC-GCA TGA TGCAGC               TTTACTGGGTTGCCC  53 18
CYD39_RS00940  213623 ..  213673 +  -9.1  -3.14132   TTGCACCTCGCTTCA TCC-CACCTACGGGCCCGTAATATC AAT GG-GTTACGGGTCGGTAGGTGAGGC TTGCTGAAACCCAAC  70 61
CYD39_RS00965  219463 ..  219476 +  -5.2  -2.62788   TTTTGCTACAATGAC               GGCG TTTTTT CGCC                TCGGTTATGATATAT  48 60
CYD39_RS00970  221169 ..  221186 +  -5.5  -4.59109   CTGCTTTGGAAATTC             TCAGGCA GTAT TGCCCGA              TTTTTAACCCCTGTC  72 475
        hrpB  230458 ..  230480 +  -4.2  -3.28368   ACGGCCCCAACGCGG          CG-CACGAA GAAGTA TTCGTGACG           TGTTATACGTTGCCT  50 5
        mrcB  233153 ..  233166 +  -5.9  -2.90392   TTAATCACGGTAATA               GTGCC GGGT GGCGC                TGTGCTTACCCGGTC  51 37
        fhuA  235686 ..  235707 + -13.7   -4.1466   TTTCTAATTTCTCTT           TGGGCACGG CTTG CCGTGCCCG            TTTTACAAGTTGGCT 100 34
        fhuC NONE
        fhuD NONE
        fhuB NONE
CYD39_RS01050  239826 ..  239842 +  -8.7   -3.7829   CTTTTTAAATATTAA              GATGTGG ATG CCGCATC              TTTAATGCATCTCGT  75 4
        stfA NONE
CYD39_RS01060 NONE
        stfD NONE
CYD39_RS01070 NONE
        stfF NONE
CYD39_RS01080 NONE
CYD39_RS01085  246902 ..  246931 +  -8.5  -2.73799   GATGAACCAATAAAA       AGCCGGGTGGCGGC TTC GCC-TTACCCGGCC       TACGTTGTTTCTGGA  64 70
        clcA NONE
        erpA  250268 ..  250298 + -10.5  -2.72471   ATTGCTGTTCGTTGT      GCCGGATGGCGACG CGAG CGTC-TTATCCGGC       CTTGTATCCTGAACA  71 40
CYD39_RS01105  251476 ..  251517 + -12.5   -3.5032   TCCGTGGGATGAAAA TTATGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACAACA TCTTTCCTGTAGGCC  93 7
CYD39_RS01125 NONE
        degP  256881 ..  256912 + -10.2  -2.58418   GATGCAGTAATCACC      TTTGTCCCCCTTCCG CCA TGGAAGGGGG-CAAC      CCTTTTCTGTGAAAC  70 31
CYD39_RS01135  258272 ..  258289 +  -6.3  -3.31263   ATCCGGCAACACACA             GCTTACT TACG GGTAAGC              TTGTCCAGATCGGCT  59 112
CYD39_RS01145  260214 ..  260231 +  -8.3  -3.12283   TTCGCCGTAATGCAA             AGGGGGC TGTT GCCCCCA              CTTTTCACTCGCTTA  66 31
        rpsB  266152 ..  266172 + -11.1  -4.89729   TATCACGTTTGGTTA            GGGGGCC TGTATAT GGCCCCC            TTTTTCACTTTTATA 100 199
         tsf  267097 ..  267118 + -13.7  -4.61633   TCCTGATTTTCCTGA           GGAGCCGCC TGAG GGCGGCTTC            TTTTTGCGCCTCTCT 100 35
        pyrH  268067 ..  268085 +  -5.3  -4.11751   GTATTGTGTGACCGT             CTGGTCT GACTG AGACTAG             TTTTCAAGGATTCGT  63 135
CYD39_RS01180  268720 ..  268769 + -16.5  -5.16151   GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC 100 84
        ispC  270104 ..  270121 +  -8.4  -5.28176   TTTTCGGTCAGGTTA             GCCGTG GTTTTA CACGGC              TTTTTTGTGGATACA  95 130
        ispU NONE
        cdsA NONE
        rseP  273292 ..  273309 +  -2.7  -3.33696   ACTTTTCAATGATTT             CTCTC GGTTGTAA GAGAG              TTAGTTAGGAAGAAC  46 13
        bamA  275756 ..  275769 +  -2.4  -3.24747   CTGGTAATTGTTCAC               TGCA AAGGAA TGCA                TTGGTAGTGTAGCGA  44 34
         skp NONE
        lpxD  277414 ..  277447 + -13.1  -3.57992   GTTGCCATTCTTTTC     CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG      TGTTATTATTGCCTT 100 55
        fabZ  277934 ..  277944 +  -4.6  -2.57136   ATGTGTGCTCGTAGC                 CGGG AGG CCTG                 ATTCGTGATTGATAA  46 14
        lpxA NONE
        lpxB NONE
        rnhB  280464 ..  280475 +  -5.8  -3.01243   GTTAAACGCGCTCTG                GGAC TTGT GTCC                 TGATTCTTGTATCGA  52 11
        dnaE NONE
        accA  284979 ..  284999 + -16.9  -5.75342   CCTCATTTTTCCCAG            GAGGCCGGA TAA TCCGGCCTC            TTTTTTTTGGACGAG 100 48
CYD39_RS01250  286909 ..  286935 + -15.2  -3.79849   TTGTAATAAGATAAA         TCCTGTCGGTGC TTT GCATCGGCAGGA         TTGTTACTATGCTTA 100 35
        ldcC NONE
CYD39_RS01260 NONE
        tilS  291283 ..  291298 + -10.4  -4.18018   CACCAGTAAGTTCGC              GGCAGC ATAA GCTGCC               TTTTCCCTGACCGAC  86 392
CYD39_RS01280 NONE
CYD39_RS01285 NONE
        nlpE  293348 ..  293368 + -16.9  -3.74077   CACTCACTAATAAAA            GGCCTCGCA GGG TGCGAGGCC            TTTACATATCTGCCG 100 31
        gmhB  299903 ..  299917 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  56 169
CYD39_RS01330  301685 ..  301698 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
CYD39_RS01335  301844 ..  301859 +  -7.6  -3.17075   GTTGTGGCAAAGCTC              GCATAC TTCA GTATGC               TTCGCTTCACCACGC  62 59
CYD39_RS01340  302021 ..  302054 +  -4.5  -4.49756   GTTTACGAAAAAATA     CTTCAGAGTGTACCT GAAA GGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  69 51
CYD39_RS01345 NONE
         rrf  305632 ..  305649 +  -5.5  -3.28791   TCAAATTGCAGTAAA             CCAGGAT GAAA ATCCGGG              TTGTGACAAAGAAAT  56 179
CYD39_RS01355  305757 ..  305778 + -15.9  -5.31519   CGCCACTTATTAAGA           GCCCTGAGC ATTA GCTCAGGGC            TTTTTCTTTGCATGT 100 36
        dkgB  306750 ..  306767 +  -9.1  -3.97043   TTTACCCCTCTTTCA             CAGCTCC TGCG GGGGCTG              TTCTTATATATTCGC  79 61
CYD39_RS01370  309016 ..  309029 +  -3.8  -2.75481   ATAACAGAAGAACCA               GTCC GGTTGA GGAC                TGGTTGACGTTACAG  45 111
CYD39_RS01375  309884 ..  309908 +  -7.7  -3.62607   GTCAGGTCTGCCGTG          GGGCAGGCCTC TGC GGGTGCTGCCC          TCTATTTTTCTCATA  69 47
CYD39_RS01380  310721 ..  310741 + -11.1  -4.49644   TATAGCAATTTAAAA            GGCGCCG GGGGAAG CGGCGCC            TTTTGGCTTTTTCGT  93 36
CYD39_RS01395  313903 ..  313920 +  -3.3  -4.21989   TACGGGTTTCTTTTC             CGCAGTT TTCC AGCCGCG              TTTCTTCCAGTTATG  58 211
        dnaQ NONE
CYD39_RS01410  315215 ..  315232 +  -9.9  -2.80994   CGGTGTTCCAGGACG             TCGCTGA TTTG TCAGCGA              TATCATGGGGTTAGA  69 54
CYD39_RS01415  316014 ..  316027 +  -3.9  -3.49419   AAAATAGTACAAAAA               TTTTG CCCT CAAAA                ATTTTTGTACGAAAA  52 328
CYD39_RS01435 NONE
CYD39_RS01440 NONE
CYD39_RS01445  318653 ..  318669 +    -8  -2.80779   AGAAATATCATGCAG              CGCAGT AGCAG ACTGCG              TAATGTTGATGTTAC  60 206
CYD39_RS01450 NONE
CYD39_RS01455  319663 ..  319678 +  -2.6  -2.83565   ACTGAATTTATGCGA              TCAGAT TTTT ATTTGA               GTTATCTTGATGATT  41 121
CYD39_RS01460  320079 ..  320106 +    -7   -5.5454   ATCATAAGTTAAAAA        GCCGGAAAGA AAATTAAA TCTTCCCGGC         TTTTTGTTTATTTAA 100 34
CYD39_RS01470 NONE
CYD39_RS01475 NONE
CYD39_RS01480  321782 ..  321795 +  -3.1  -2.80816   CATTCGAGGTGTCTA               TCGGA GATT TTCGA                TCTGATGGATAAGGA  43 88
CYD39_RS01485  322560 ..  322573 +  -5.3  -4.24364   TGGTTGAAAATAATT               GCATT AGTG AATGC                TTATTTATGTCTTTA  65 280
CYD39_RS01495  323347 ..  323362 +    -9  -3.85698   ACTGTTAAAGATGTC              TACCGG GAGG CCGGTA               TTTCTGAAGCCACCA  77 471
        papD NONE
CYD39_RS01520 NONE
CYD39_RS01525  329340 ..  329356 + -12.3  -2.66034   CACTCTTTTGTGAGC              GGGGCTT TAT AAGCCCC              TGGTATAAGGTTTGT  81 291
CYD39_RS01530 NONE
CYD39_RS01535  330763 ..  330777 +  -4.2  -4.20516   GGCGATGTTTTGCTT               GTTTCC ACG GGATAC               TTTGTTAGGTGAACG  62 145
CYD39_RS01540  332143 ..  332160 + -11.3  -3.65542   AGGCATCGAGATATG             CGACTGG TCAG CCAGTCG              TCTTTTGACGATGCC  87 101
CYD39_RS01545  332482 ..  332496 +  -2.8  -5.07053   TAAGCGGTATGTTCA               TCACCA GCA TAGTGA               TTTTTTGAAATGCTT  76 105
        lpcA  338376 ..  338407 + -11.6  -2.87319   GGTTGCGCTCAGAAA      CCCCAGTCACATAG TTAT CTATGTTCCTGGGG       ATTTCCTCCCTTACC  78 75
CYD39_RS01580  339756 ..  339768 +  -6.2  -3.55444   CCGGACTTTTAAAAT                CGCC CTGAC GGCG                TTTCGGGCCTAACCC  57 475
        dinB NONE
CYD39_RS01595 NONE
CYD39_RS01600  343409 ..  343431 +   -12  -3.10173   TATTCCATATTGATA           GCCCGTCC AGAAATG GGACGGGC           ATTTTAGCGCTTTCT  81 143
CYD39_RS01610  345625 ..  345649 + -17.1  -4.78572   ATCAGCAGCTTTTCA          GAGCGCCCGGC AAT GCCGGGCGCTG          TTTTATTGGTTACAA 100 40
        frsA  346925 ..  346937 +  -2.7  -3.17586   AATTACCGACTGGAT                TAATC ATA GATTG                TGTTAATAGATTGAT  45 7
CYD39_RS01620  347731 ..  347745 +  -9.2  -2.75267   TTTTATTGGCAAATC               CGCCGG AAA CTGGCG               TCATGTTGCGGGTTT  60 354
        proB  349867 ..  349880 +  -3.1  -3.18264   CCCGGTCGCTGTTCA               TCGTG ATGA CATGA                TTACTCGATAAGGAA  46 1
        proA  351213 ..  351226 +  -5.3  -3.30619   ATTGACGCACCGCCC               GGTTA GTTT TAACC                TTCTACCCCGTGATT  54 85
CYD39_RS01640 NONE
CYD39_RS01645  352283 ..  352296 +  -2.3  -3.49475   CGCTGGCGTAAAAGT               CCTGC TTCA GCAGA                TTCTCTGAGACTGGC  47 525
CYD39_RS01660  353832 ..  353858 + -11.2  -3.22884   TCGTCAAATTAATGT         CTATATATTTAT TGA ATAAATATATAG         TTCATAACTTACTAC  81 141
CYD39_RS01665  355303 ..  355313 +  -3.2  -5.04325   GTTTCTGATTATAGA                 CACG AAG TGTG                 TTTTTATACTTTCCA  74 33
        leuC NONE
        leuD NONE
CYD39_RS01680 NONE
CYD39_RS01685 NONE
CYD39_RS01690  360287 ..  360312 +  -6.9  -2.66912   GCGTACTGTGATCAG         TC-GGCGCCA ACTGTCG TGGCGCCAGA         TGCTCTGACTTACGT  55 30
CYD39_RS01700  361602 ..  361625 +  -9.6  -2.62613   TGAGTCTGACTTGTC          TCAGGGATAC GATC GCATCCCTGA           ATATTTCCCATCAAA  68 38
CYD39_RS01730  368996 ..  369006 +  -2.6  -3.89614   GAACGTTACTGATTA                 TATT TGT AATA                 TTTATCGCCATTGCC  54 29
CYD39_RS01740 NONE
CYD39_RS01745 NONE
CYD39_RS01750  372969 ..  372979 +  -3.2  -3.20573   TGACTGGTAATAAGC                 GCAT TAG GTGC                 TCTTAATCTAAATGC  46 340
CYD39_RS01755 NONE
CYD39_RS01760 NONE
CYD39_RS01765  374603 ..  374622 +    -5  -3.06839   TATAGTTCCTTGACG            GCGTTC AGAAGCAA GAACGC             GTTATTATTTAATGA  51 28
CYD39_RS01770  375047 ..  375080 + -23.9  -3.61103   TAATATATGCCTGTT     TAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTA      TTTGGGCTAACCTTG 100 55
        golT NONE
        golS NONE
        golB  384455 ..  384469 +   -10  -2.81088   AAAGATAACAAATAA               GTAGCG CAA CGCTAC               CTTGTTACGTCGCTT  71 216
CYD39_RS01805  385835 ..  385861 +  -3.5  -4.10453   CCTGGCGCATACTGT         CGCCGGGAGCA CGCCT TCCCCCCGTCG         TTTTCACGCCCTTTC  57 51
CYD39_RS01810 NONE
CYD39_RS01815  390988 ..  391016 + -10.2  -3.40299   ATAGACCATATAAAA        TGGCCGCCGCGC AGCGA GCGTTGCGGTCA        TTCTCCCTGTGCTAA  76 75
CYD39_RS01820 NONE
CYD39_RS01825 NONE
        cydB NONE
CYD39_RS01835  393990 ..  394016 + -14.5  -4.83169   CTGATATCCCCCGGA         CGCGCTTTCGT CTCTC GCGAAAGCGCG         TTTTTATCGACAGAT 100 41
CYD39_RS01840  395222 ..  395234 +  -2.6  -2.85726   TATCCGCTGCTAACC                CGGT TTTCT GCCG                CTTTGGGTGATTTTT  42 62
        foxA  397669 ..  397682 +  -5.9  -3.89346   CCAGGCCATTAACCT               TGCCC ATGT GGGCG                TTTCTGCGCTAAGCG  63 255
CYD39_RS01855  398639 ..  398663 + -12.2   -5.1356   GTTGCATCATAAAAA         TACCCGCCTGG GTTT CC-GGCGGGTA          TTTTTATTCCTGGCA 100 45
        prpB  401552 ..  401587 +  -3.8  -3.53811   GTAGGCCTGATAAGG    CGAAGCCGCCTTCAGGC AAT GCCGGATGGCA-CTACG    TTTAACCCGCCTACG  52 44
        prpC NONE
CYD39_RS01875 NONE
        prpE  406690 ..  406700 +  -8.2  -2.70932   CGGTCGCCTTTTAAC                 GCGG TGC CCGC                 TGCTTCACGGAAGGG  57 472
CYD39_RS01890  410850 ..  410873 + -15.4  -3.61715   ATTTAAACTGAAAAA          TGCCCGTCAA GGAC TTGACGGGCA           TTATTGCAAGGAATG 100 69
        iprA  411960 ..  411983 +  -8.8  -3.38812   GCGTAGAATAGACCC          CGC-CGCTGCC AAT GGCAGCCAGCG          TATTATTACAGGGGC  66 470
        sbmA NONE
        yaiW  415701 ..  415714 +  -2.3  -4.08767   GTTTCTCGATGCTTC               CCGCT GAAC AGCGA                TTTTGAGAGAGTGAA  56 334
CYD39_RS01920  416481 ..  416499 +  -5.3  -3.51825   CGTCTGATAAGCCTG            GAT-CGCG ATCG CGCGGATC             TTGTCATTCACCTCG  55 285
CYD39_RS01930 NONE
CYD39_RS01935  419520 ..  419545 + -14.1  -3.03781   GCCAATAGCGGTGCA         TCGTAACGGCG CTTC TGCCGTTACGA          TATGGTTTAAATTAA  89 33
        iraP  420124 ..  420180 + -21.3  -2.82635   TTATGAAATACCATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGGGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT 100 80
        psiF  420743 ..  420776 +  -6.8  -3.79747   AAAGCGGCGTAGTGC     TATCGGGTGAGT CCTGAAAAAC ACTCACCCGAAA      TTTCATACTCCCTCC  66 29
        adrA  422100 ..  422115 +  -6.8  -3.61371   ATATCTTTCAGTTCG              CCGGGA TGCT TTCCGG               TTTCGAGTACCATTT  60 182
CYD39_RS01960  423513 ..  423526 +  -8.1  -3.14132   TGCTGATATCAAATC               CTGCG TATG CGCAG                TTCCTGGGGGAACGC  64 176
        aroL NONE
        yaiA  424330 ..  424346 +  -2.1  -2.64877   ATGAACCACTCGGAA              GGGATTC CGG GTACCCC              TAAATTGTATCTCCA  39 45
CYD39_RS01975 NONE
        ppnP  425603 ..  425630 + -10.6  -2.90723   TTATAACGGAGCGGT        GAGTCCCCTCTCC GGC GGAGAGGG-ACCC        TCTGGTTAGCGCTGC  75 35
CYD39_RS01990  427813 ..  427823 +  -8.2  -4.07568   CGCCCAGCAGTTCGC                 CGCC TTT GGCG                 TTTTGCAGCAGCAGG  77 257
        phoB  434192 ..  434233 + -13.1  -3.85389   CGACCCGCTTTTAAT GCCTTTTCCGCCAGTTGATC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG 100 27
        phoR  435582 ..  435603 + -13.1  -4.90525   AAGTATAACTTTCCA           TAAGCCAGC GGAT GCTGGCTTA            TTTTCTTTGCAGTTA 100 52
        brnQ  437305 ..  437327 + -16.3  -5.64304   TGACATATGTGTACA           CCACGGGGC TTAAC GCCCCGTGG           TTTTTTATTGTGTTG 100 47
        proY  438734 ..  438786 +  -9.2  -2.66216   GCAGGCGTAGTCGTT TTTCTCTGCCTTATCCGGTCTGCAG GCAA CGGTAGACCGGATAA-GCGGAGCCG CTTCTCCTCCTGGAG  66 31
        malZ  440743 ..  440760 + -12.7  -4.42653   CTTACGCATAAAAAA             GGCTCGC ATTC GCGAGCC              TTTTATCAATGCACT 100 61
        queA  443460 ..  443486 +  -6.6  -2.72344   GCCTTCGGGAATTTA         TTAGCTATGGAA TCA TTCCGTAGCGAG         TCGTTAAACGTCGGA  55 155
         tgt  444630 ..  444646 +  -5.1  -3.54779   ACGTCAGGGGCGACC              CGTTCCA CCT TTGAACG              TTGATTAATTTTAAT  56 1
        yajC NONE
        secD NONE
        secF  447892 ..  447917 + -11.1  -5.18726   ACATGACTGAAAAAA         GCCGCAACATC GCAG GGTGCTGCGGC          TTTTTATTATCCAGA 100 51
CYD39_RS02070  448491 ..  448510 +  -6.4  -6.20267   ACATTGTCACTGGAA            TCCCGATC GCAA GGTTGGGA             TTTTTTTGTTTTTAA 100 209
CYD39_RS02080  448903 ..  448924 + -15.9  -5.07107   CATGCGCCCGAAACG           GGCCAGAGG GCGA CCTCTGGCC            TTTTTTGCAGGTTTA 100 75
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB  453385 ..  453398 +  -3.7  -5.61277   GCGATGGATGATACC               CGCCG TCTC CGGCC                TTTTCTTTTTTTCTG  88 64
        thiL NONE
        pgpA  455245 ..  455266 +  -5.3  -4.57569   TATTTGCGCATCATT           TTTAT-CGCT TTC AGCGTATAAA           TTTTTACCCACGTCA  73 369
        thiI  460852 ..  460862 +  -8.2  -2.61144   CAATGGTCAGCGCCG                 CGCC GTC GGCG                 ATATTTCCACGGTCG  56 155
        phnW NONE
CYD39_RS02180  467560 ..  467604 + -13.7  -3.34517   CCGGATGGCGCTGTC GCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT 100 49
CYD39_RS02195  469821 ..  469868 +  -5.5  -3.90112   TTTGCTGTCGATTTT GACGTAAGCGGAATGCTCTTC CGCCAC GATCAGCGCTTCGCTTACGCC TTTCATTGCCAACAG  61 132
CYD39_RS02205 NONE
CYD39_RS02210  474727 ..  474747 + -11.1  -5.08824   AAATGAATAAAAAAA            CCGCCGTTT GTG ACACGGCGG            TTTTTTCAATAGCAA 100 68
        bolA  482794 ..  482807 +  -9.5  -5.23292   AGAATTATGTGAAAA               CGGCC TGCG GGCCG                TTTTGTTTTGTCTGA 100 86
CYD39_RS02260  484414 ..  484435 + -11.6  -5.93809   AAATTTGCACAAAAA           CCCGTCAC CTTTCA GTGACGGG            TTTTTTTTGTCACGC 100 61
CYD39_RS02265  485315 ..  485357 +  -5.5  -2.53213   GTGTTGGCTGCCAGC GCGCCTCC-CAGTGACTTAC TTAT GTAAGCGCCTGCGGAGTCGC TGAGTTGCCGCCTTG  49 92
CYD39_RS02270  486804 ..  486822 +   -11   -4.3623   CAGTTAGCCAAAAAA             GGGGGGAT TTT ATCTCCCC             TTTCGTTTTTCCTGT  90 58
CYD39_RS02275  489344 ..  489373 +  -8.6  -5.72616   CGCTAATAAAAACAG       GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC       TTTTTTTGTATAGCT 100 58
        hupB  489828 ..  489847 +   -10  -5.45652   GTGACAAAGTACAAG            GGCGCATC AACT GATGTGCC             TTTTTTATTGGCGAT 100 61
        ppiD  492002 ..  492017 + -11.8  -4.39571   GTTGTATCCCACAAA              GGCCGC TTTC GCGGCC               TTTTCCATTTCTGAG  95 73
CYD39_RS02290  492514 ..  492536 + -10.7  -3.00601   ATTTGCCAGACTGTA           GAGGTCATA CCAGT TATGACCTC           TGTACTTGTCGTTTA  76 61
CYD39_RS02295  493335 ..  493361 +    -5  -3.54741   GATATCTTTCGCCAT         GCCCAGATTCAC CGC GTGATTCAGCGC         TTTGACGAACTCATC  55 380
         cof  496483 ..  496501 + -10.3  -6.28967   GATCTCTTCCAGCAA             GCCAGAC ATTCA GTCTGGC             TTTTTTTTGTTTCTA 100 43
CYD39_RS02320 NONE
CYD39_RS02325 NONE
CYD39_RS02330  501762 ..  501778 +  -6.5  -5.30616   AAGCCTCGCCCATCA              TGCACCG TCG TGGTGCG              TTTTTCTTTCCCTGC  87 60
        glnK NONE
        amtB  503673 ..  503691 +  -4.4  -5.33848   CGTCATCAGGCCATT             AACGCCGC ATA GCGGCATG             TTTTTTAATTGTGAT  84 102
CYD39_RS02350  505352 ..  505372 + -16.9  -3.14132   TTAATCCTGCGCCAA            CCCTCTCCG TTA CGGAGAGGG            TTAATACACCCAGCG 100 37
         ffs  506081 ..  506091 +  -6.8  -2.65139   TAATGTACGCCATGC                 TGGC GTA GCCA                 CTGTTCTTGCCTGGT  51 163
CYD39_RS02370 NONE
CYD39_RS02375  508199 ..  508222 + -10.3   -5.4505   GGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGAC 100 50
        acrR  515830 ..  515850 +  -4.8  -4.61868   CTCCCCCTGATAATA           T-TCCAGGA AAAC TCCTGGACA            TTTTCTGTGTCGCTA  73 31
        mscK  519462 ..  519491 +  -6.3  -4.09739   CGCGCTTCGGCCTCA       CGGCCTTGTGCTA ACCC TTGCTCAAGGCCC        TTTTGCAACCCTTCC  67 182
CYD39_RS02435 NONE
CYD39_RS02440  522235 ..  522259 + -16.5  -3.09671   TTTTAGCCAGAGAGA          CAACCTCGCTG TAT CGGCGAGGTTG          TGTTAGCATTACCCT 100 62
CYD39_RS02445  524241 ..  524259 +  -9.6  -3.30124   ATCCGCCCCATTTGA             TCGTAAGC CCG GCTTGCGA             TTGTGAACCATCAAG  74 26
CYD39_RS02450  524595 ..  524608 +  -2.3  -2.64099   ATGCAACTGCCGCCA               GGCTT TAAG ATGCC                ATTCTGATGCAAACC  39 5
        recR  525296 ..  525312 +  -3.7  -3.67558   CCCTCAACGTATTTT              TACCATT AAA AATGGCA              TTGTTGAGGTCTATC  53 101
        htpG  527276 ..  527304 +  -5.2  -5.31877   CGAGTACTGTTTGTA       GGCCGGATAAGCG CCAG CGCC-ATCCGGCA        TTTTTTATAATACCT  82 96
CYD39_RS02465  528162 ..  528193 +  -4.3  -3.30441   AGCGTAACGCCATCA      GGCAATCGGTGCCG GATGG CGGC-CTGAACGCC      TTATCCGGCCTACTG  52 96
CYD39_RS02470  529538 ..  529554 +  -5.1  -3.34013   AACAGACAATACCAG              GGCGATT CCC GATCGTC              TTCGTTACGCAGATA  53 281
CYD39_RS02480  532043 ..  532067 +  -7.8  -3.14211   CGGCGTTGCCCAGCA          CGGCGCGAAT CCCGC GTTCGCGCAG          TTCATCCACGCGGGT  57 361
CYD39_RS02495  537024 ..  537040 +  -5.8  -4.56597   GTTGCGCCACCATCG              GGTCGG CCATA TCGACC              TTTTTCGCGCCCAGA  75 357
CYD39_RS02520  542437 ..  542448 +  -5.8  -3.13522   ACTTCGACATGCGTA                CCTG CGCG CAGG                 TCTTCGTCAGCGCAT  52 84
        fetA  544548 ..  544566 +    -3  -2.74523   CGGAGAGATGCAGGA             GGCGCGTT ATG AACGAGCA             TAATATTACCAATAC  41 4
        fetB  545739 ..  545758 +  -3.6  -4.57341   CTGATAACGGGTATC            CTGATCCTG TAG CGGGAT-AG            TTTTTAACACCGCTT  69 429
CYD39_RS02560 NONE
CYD39_RS02565  550962 ..  550985 + -12.4  -3.41701   TGATGTGAATAATTT          CGCGCCGGTT TTTA AAACGGCGCG           TACTTTTTTAGTCGC  90 45
CYD39_RS02570  552274 ..  552308 +  -2.1  -3.71378   TAAAGCGTTTTCCTG    TGCCGGATGTTGGCGT TAAG ACCTCT-TATCCGGCA     TTTCCCTCTACGCTA  49 38
CYD39_RS02575 NONE
        sfbB NONE
CYD39_RS02585  555121 ..  555144 +   -11  -5.27923   AACGTCTTGCCATGG          GCCGCGAAAA ACGA TATTCGCGGC           TTTTTTCTCCAGTTG 100 93
        allA  557906 ..  557920 +  -7.2  -4.12254   CCTTCTTGCATAAGA               TGAACA TAT TGTTCA               TTGTTTATGCTCATA  72 50
        allR  558785 ..  558804 + -13.6  -3.67443   GTAGCCTGAGCCGCA            TCCCGCTC GCTG GAGCGGGA             CTTTTTTAAAATTTT 100 32
         gcl NONE
CYD39_RS02615 NONE
        glxR  562403 ..  562428 + -11.9  -3.01712   ATTGTCCTAATTATG         TGTATCGCTGC GGCT GCAGCGATACC          TGTTCACAAGGAACA  81 31
CYD39_RS02625 NONE
CYD39_RS02630 NONE
        allB  566716 ..  566736 + -16.9  -3.83378   TCCGGTGTGATTTAA            TGCCCGTCG TCA CGACGGGCA            TTCTCTATTTTAAGG 100 41
CYD39_RS02640 NONE
        glxK  569430 ..  569440 +  -2.4   -3.8062   AGTCGCCTTTTTTCA                 CCGG CAC CCAG                 TTGTTGTCGAGGTTA  52 227
        fdrA  574388 ..  574402 +    -2   -3.6682   TTAGAACGTTTGCAA               TAAGGG GTT CCCATG               TTTACATCAGTGGCG  49 23
CYD39_RS02670 NONE
CYD39_RS02675 NONE
CYD39_RS02680  577380 ..  577414 +   -10   -3.8323   CATCTGTCTGTGATC    GCGACGGGCGGCGACA GAAAA TG-CGCCGCCCA-CGC    TGTTTATTTAAGCTT  80 28
        cysS  581896 ..  581925 + -15.1  -6.12458   AAGTAAGCGCTTTTA       CAGGCCGCTCTAT TTGC ATAGAACGGCCTG        TTTTTTATTTTTTTG 100 35
CYD39_RS02735 NONE
        fimA NONE
        fimI NONE
        fimC NONE
CYD39_RS02755 NONE
        fimH NONE
        sfmF  591591 ..  591615 + -10.8  -2.65532   TGTCCGTTATTGTGG         CTCCCGAACGA TAAT TCGT-CGGGAG          TACCTTTACAATAAT  74 41
CYD39_RS02790  594891 ..  594906 +    -4  -3.14878   CGTATAATTCTCGCG              TTTCGT CTAC ACGAAG               TCTTCACTTCACAAG  48 57
CYD39_RS02795  595239 ..  595250 +    -3   -4.1523   CATGCCGGCGTCTAC                TGTT ATAA AACA                 TTTCTATGTAATCAA  56 266
CYD39_RS02845  603060 ..  603076 +  -9.4  -5.83822   AACATAAATAACGTA              GCCCTG TTAAT CAGGGC              TTTTTTTTGCCTGTC 100 41
CYD39_RS02850 NONE
CYD39_RS02855  604056 ..  604085 + -14.3  -3.13867   TCTTTATGCCGCGAT       TCGTCGGGTGGCG CTTG CGCCATCCGACAA        TGTGTTGATGAATGA  95 71
        pheP  607006 ..  607037 +   -16  -2.56596   GGCTCATTAACTTTT      TTGCCCGATCCCAT GCTC ATGCGATCGGGCAA       TCCATTAATGCCGCA 100 31
CYD39_RS02875  610627 ..  610639 +  -3.3  -4.56607   CATCGTAGGCGCAAA                CCGGT GTC ACCCG                TTTTCTCCTTCATCC  64 82
        ramA  613273 ..  613308 +  -2.6  -4.56597   CAACAAAGTATAAAG    CTGGTTGAGATC CATAAGATGAAA GATCCCGACCAG     TTTTTGCGCCAGCGC  65 133
CYD39_RS02920  619031 ..  619049 +    -3  -3.13475   CACGCTTTAACCGGG             CACATGTC CAT GACAGGAG             TTGAGTATGGAATTC  45 31
CYD39_RS02925 NONE
        entF  623195 ..  623221 +   -14   -5.7946   AATTAAATCCTGAAA         CCCATAATAATT ACT AATTATTATGGG         TTTTTTTATTGCAAC 100 65
        fepE  624555 ..  624574 + -12.2  -4.05389   TGATTTACCCGAAAA            GCCGGATA GCGA TATCCGGC             TTTGTCATCTGTGTG  93 38
        entS  629040 ..  629053 +  -2.3  -3.54424   ATCGTGGCGCTTACC               CTGGC TTTT GCTGG                TTTGCAGCCCTCGGG  47 328
        entC NONE
        entE NONE
CYD39_RS02975  633719 ..  633738 +  -3.5  -3.48505   GGCGCTGCTTTCTCG            CGGGGTA GAGTAA TGCCCTG             TATTGATTTTTCAGA  50 13
        dhbA NONE
        entH  634979 ..  634990 +  -2.2  -2.58651   TGTAATGTAAAAAAT                GGGT AACG ATCC                 GGTTTTATCATGTTG  39 102
        cstA  637206 ..  637230 + -12.9  -2.78798   CTTTTTTCATCAATA          GCCCTCTCC AGAATAA GGAGAGGGC          ATTTGAATGACAGGT  85 42
CYD39_RS02995  637749 ..  637761 +  -3.4  -4.81249   CATAAGCCACTTTCG                TTCC GTGCA GGAA                TTTTTCCGTTTGCGG  70 324
CYD39_RS03005  639889 ..  639923 + -10.1  -3.24232   CCACGCTCTGGAGAA     TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA     TCTGTTTCAGGCGCA  74 53
        ahpC  644959 ..  644976 + -12.7  -4.05788   AAATTGTTTCAGTCA             TGGGCGC ACCC GCGCCCA              TTTCATTTCAGCACC 100 162
        ahpF  646769 ..  646789 + -14.1  -5.63517   ATCAATACTCTGAAA            CCGTCTGTT AAT AACAGACGG            TTTTTTATTTCAACG 100 165
CYD39_RS03040 NONE
CYD39_RS03045  649789 ..  649801 +  -5.5    -3.445   AAAGGGGAATCCGTA                GCATG AGA CGTGC                GTTTTTAGTGAATAG  57 20
CYD39_RS03050 NONE
CYD39_RS03055  651130 ..  651162 + -13.4  -2.83903   ACGATGATGCAGTAA      AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG      TCAGTTTTTAGCCGC  86 40
CYD39_RS03065  653103 ..  653122 + -12.2  -2.87881   AAGGGCTAACGGAAA            GAGGATGC GCAG GCATCCTC             TGTGTAAACGCATTA  80 56
        dpiB NONE
        dpiA  664137 ..  664155 +  -2.4  -3.59979   GCCGCAGCGTATTTA            CCACGGC GGCTAA GCC-TGG             TTTAAGATGCCGGGG  49 13
        pagp  666685 ..  666701 +  -7.3  -4.02302   GTTGTACTGGTATCC              GACACAG CAT TTGTGTC              TATTTTTCATGTAAA  72 171
        cspE  666965 ..  666981 + -10.8  -5.81032   AGCAAGATTTCAAAA              CCCGCC CTTTC GGCGGG              TTTTTTTTGCGCTTA 100 54
CYD39_RS03145  668344 ..  668363 +  -5.6  -4.72272   TATTCTCAGGTTAAT            CCGGC-GCG TTA CGCAGCCTG            TTTTTAGTGAAGAAG  74 113
        tatE  668623 ..  668637 +  -9.2  -5.81412   CGCAGAGTAAAAAAA               CCGGCG AGT TGCCGG               TTTTTTTTGCCTGAA 100 60
CYD39_RS03210  680835 ..  680848 +  -8.1  -3.04461   GGGTCAGATGCTGTT               CCAGC CACT GCTGG                TGTTGCGCCTGCGTC  60 191
CYD39_RS03235 NONE
CYD39_RS03240  687280 ..  687301 + -10.1  -3.54653   CGTTCTGATACCAAA           TCGGGCAGC ACAA GCTGTCCGG            TTATCTCCTGGGAAT  77 33
CYD39_RS03245  688301 ..  688316 + -11.8  -3.85698   GAAAATAAATCACGA              CGGGCG GTCT CGCCCG               TTTATAAACCAACAG  93 51
CYD39_RS03250 NONE
CYD39_RS03255  690850 ..  690873 + -13.2  -3.04263   TAAGGTTCATTATCG          TGAGCGGACGG TTG CCGTCCGC-CA          TGTTAAGCGTGCAGT  86 38
CYD39_RS03265 NONE
CYD39_RS03270 NONE
CYD39_RS03275 NONE
CYD39_RS03280  696316 ..  696330 + -12.8  -3.62275   ACAGGGGTAGTGAAA               GCGCCG TTA CGGCGC               TTTCGGCTCGTCAAT  95 41
        ubiF  711169 ..  711190 +  -3.7  -3.06686   CCATTTCAATTGTGC           ATACGTTGT ATTG GCAACGTAC            TACTTTATGTAGCAT  45 175
        nagE  722372 ..  722395 +   -11  -5.75342   TCACAGAAAACATAA          GCGGCAGAGGG AAA CCTTC-GCCGC          TTTTTTTTACCGCAA 100 84
        glnS  724234 ..  724250 + -11.5  -5.38951   AAAATACCTTGTCAA              CGCCGCG TTT TGCGGCG              TTTTTTCTCTGCATT 100 68
        chiP  726265 ..  726291 +  -8.6  -3.01712   ATTTTCTGATGTCAG         ATGCGGCAGGCT GCC GGTCTGCCGCGC         TGTTGAGGAACGACC  66 32
CYD39_RS03435  726657 ..  726683 + -13.7  -5.07107   ACCCTTCCTTGCCAC         CCACGGGCGAA TGTTT TCCGCCCGTGG         TTTTTTCAGGCTTTA 100 42
        seqA NONE
CYD39_RS03485  736737 ..  736752 + -10.4  -5.47159   GATATGGAAGAAAAA              GGAGCC GTAA GGCTCC               TTTTTTATATTAACG 100 46
CYD39_RS03540  750013 ..  750027 + -11.4  -5.60993   TGAAAAAACCGTCAG               CCGCCA CGC TGGCGG               TTTTTTTATGCGCCA 100 53
        phrB  751523 ..  751548 + -16.2   -3.4678   AAGGGGCGTGATACA         GGCCCGGTAG CGCAAA CTACCGGGCC          TTCTGCTATCAGGAT 100 30
CYD39_RS03555 NONE
        pxpB NONE
CYD39_RS03565 NONE
        pxpA NONE
CYD39_RS03575  757501 ..  757515 +  -2.7  -2.77899   GCATTGCCATGATGA               GCGCC ATATC GGCAC               TGCTTCCTGCCGCGA  41 181
        sdhC  760989 ..  761002 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
CYD39_RS03605  764176 ..  764196 + -14.1  -2.55351   ACAAGTGAACCCCGG            CACGCATAC AGC GTATGCGTG            GTTAGTATCCACGGC  87 351
        sucA NONE
        odhB  768450 ..  768463 +  -6.7  -2.81464   AAGGCGTTCACGCCG               CCATC CGGC GATGG                TGTAATGCCTGATGG  55 77
        sucC NONE
        sucD  770625 ..  770643 + -11.7  -5.33866   GTTTTCGACATGGTT             GGCCACC TTTAC GGTGGCC             TTTTTTATGGCTTTA 100 75
        cydA NONE
CYD39_RS03635 NONE
        cydX NONE
        ybgE  775324 ..  775349 +  -9.1  -4.82154   AAACCTCCTTAAAAA         TATAGGGGCTT GCAT AAGCCCATATA          TTTTTACTCTCCCTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal  780281 ..  780292 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
        cpoB  781075 ..  781122 + -14.3  -3.15579   TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA  95 27
CYD39_RS03685 NONE
CYD39_RS03690 NONE
CYD39_RS03695  781738 ..  781752 +  -2.1  -3.10409   AAATCTTTCAGGCAG              C-ACCC GTAT GGGTCG               TTAGCTCAGTTGGTA  42 159
CYD39_RS03700  781945 ..  781959 +  -3.5  -2.76189   TGATTGAAGCAGTAA               CCCTT ATCCA AGGGG               TCGTTAGCTCAGTTG  43 148
CYD39_RS03705  782142 ..  782156 +  -8.5  -5.24989   CACCAATGTAAAAAA               GCGCC CTAAA GGCGC               TTTTTTGCTATCTGC  95 135
        nadA NONE
CYD39_RS03715  784216 ..  784272 +  -3.9  -3.22774   GCTTTCCCGTTAATG GTGATGAACAT-GCCCGGA-TGGCGTCTG ATT CAGATGACAGTCCGGGCCGTGA-CA-CAC TTGATACTCCATCTG  48 28
        aroG  787061 ..  787088 + -15.7  -3.06315   AGGATAGAAAACATA        TCGGTCCGGTA ACAGCC TACCGGACCGA         TATTGCCAATATTAA  93 69
CYD39_RS03745  789686 ..  789697 +  -5.8  -3.63627   TAGCCTCTATATCTT                GCCT GGCA AGGC                 TTTGAGGTATCCAGG  60 175
CYD39_RS03755  792028 ..  792038 +    -4  -3.77832   GCCTGATATTACTTT                 TCTA TTT TAGA                 TTATTAAATTTGAGA  55 42
CYD39_RS03760  792299 ..  792309 +  -2.6  -3.53444   ACCACCATCGCCGCC                 TTAA CCC TTAA                 TTTACGGAGGAATCC  48 15
        oadA NONE
CYD39_RS03770  795445 ..  795458 +  -8.1  -3.09491   GGCGCGTTGCGTCTG               TCCGG GCTA CCGGA                TTGCATGGATCTGTA  62 62
CYD39_RS03775  796388 ..  796405 + -11.3  -5.76633   TGTCAGCAGCCTCAA             GCGTGGA TGGC TCCACGC              TTTTTTTGTCTATGG 100 188
CYD39_RS03780  797661 ..  797691 +  -4.7  -2.52834   TTTTTAAGCATTGTA      TTGCGACATCGGGG GAGT CTCTGATG-CGCGG       GTTAATGCTCCGCTC  46 2
CYD39_RS03785  798469 ..  798514 + -18.6  -3.32343   TGTTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCTATCCG 100 31
CYD39_RS03830  807694 ..  807711 +  -9.8   -5.1356   GCTGATTTCCCCAAA             CGCCCG CTCAGT CGGGCG              TTTTTGTTACTCAAG  93 36
        modA NONE
        modB NONE
        modC  810578 ..  810592 +  -6.4  -3.95456   CGCTTCTATCCACTG               GGTAAG GCG CTTGCC               TTTACTGTTGCCTTT  65 230
CYD39_RS03855  812440 ..  812468 + -17.4  -3.87815   CTTGCAGTAAAACCA        CGGGCCGCCACA TCTGC TGCGGCGGCCCG        TTTATAAGCCTGAAC 100 114
CYD39_RS03865 NONE
CYD39_RS03870  816159 ..  816173 +  -2.1   -3.3382   GCTTGGCTGGCAAAT              CGCGCA CTGG TG-GCG               TTAATCTGTCATCCG  45 7
CYD39_RS03875  817027 ..  817044 +  -7.1  -3.08176   TTCTATTCTTGTGCT             TACTTGT ATAG ACAAGTA              TATGTCTGATTCTTA  60 105
        hutU NONE
        hutH  820379 ..  820410 +  -8.6  -3.53444   GGCGCGGCGCGTATT      CGGCTTACCCAACC CGTT GGCAGGGTAAGACG       TTTACGCCGCCATCC  71 53
CYD39_RS03900 NONE
        bioF NONE
        bioC NONE
        bioD  825982 ..  826001 + -12.2  -3.54488   AAAAACCGCCTTCTT            GCAGGATC AGAC GATCCTGC             TGTTCTTTCGCCAGA  88 49
CYD39_RS03920 NONE
        uvrB  828648 ..  828672 + -10.7  -4.17089   ATGTGTCGATCTCCA          GCGAGTCATCG TTA CCATGGCTCGC          TTTTGAGAATTTCAG  88 43
        slrP  831449 ..  831476 + -13.6  -3.40403   CAGAAGGGGGAGAGA        GCCTGTTTAC-CC TTC GGTGTAAACAGGC        TTCTGATAAGCGCAG 100 56
        moaA  833804 ..  833818 +  -2.8  -2.76492   TTACATTGGCGGTTA               ATCCTT AAT AAGGAG               ATTTCAGATGAGTCA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE  835526 ..  835545 +    -5  -3.53091   GTTGGTAGCAGAATG            TGATACGC TTTA GGGTATCA             TTTCCACACAGGAGT  56 33
CYD39_RS03965  836290 ..  836308 + -10.3  -5.42862   AGCGATCTCTTAAAA             TCCTGGC CCTGC GCCAGGA             TTTTTTTAGGACTAT 100 45
CYD39_RS03970 NONE
CYD39_RS03975 NONE
CYD39_RS03980  838646 ..  838680 +  -8.6  -3.64703   CCCATCGCCATCCAG     TTCGCGCTGGAG ATCGCCATCTG CGCCAGCGCGAA     TTTCCATGACGGCAG  68 347
CYD39_RS04000  842220 ..  842230 +  -2.4  -3.53091   GTCGCGACAATCAGC                 GCCG GCA CCGC                 TTTACCAACGAAAAT  47 417
        rhlE  849183 ..  849224 + -12.5  -4.25104   CTACGGACTATGCAA ATACGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACATAA TTTTCATCCCACGGA 100 84
        dinG  852670 ..  852683 +  -9.5  -3.24747   AAAGCAAAACCTGCA               CGCCG CCGA CGGCG                TTAATGCTGTGAGCA  72 8
        ybiB  853963 ..  853998 +    -6  -4.41844   TAGCTTCCAGGCCAT    CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA    TTTTATGCAGGTTTT  73 297
        rlmF  856286 ..  856299 +  -2.3  -4.11692   TGGTGACTAAGTCGC               CGGTA TTCA TCCCG                TTTTCAAACTGAATA  56 522
        ompX  863459 ..  863476 +  -9.1  -5.81412   GGTGAAAATGAAAAA             TCCGCCT TTCG GGGCGGA              TTTTTTTTGCCTGAA 100 48
CYD39_RS04110 NONE
CYD39_RS04115  867465 ..  867488 +  -7.4  -4.15106   CACCTCAATGTAACG          GCTACCGTCCG GCT CGG-TGGTGGC          TTTTACCGGTTCATC  74 250
CYD39_RS04125  870023 ..  870055 + -15.7   -3.0263   ATCGAGTAAGTTATT      GTCTGTAACCCCGAT AGC GTCGGGGTTACAGAA      TGTTAACAAGGTAAT  93 32
CYD39_RS04130  871163 ..  871182 +  -9.2   -2.9175   AATGCTCATTGAGAA            ATCGGGGC AATT GCCCCGAC             TCTCGTTAAAGTGTA  67 29
CYD39_RS04145  874451 ..  874464 +  -8.1  -3.04144   CCCTTCTGATTAACA               GGCCT GCGT AGGCC                TGTTAAACGTAGCGC  62 32
        iaaA NONE
        gsiA  883131 ..  883142 +  -7.2  -3.36492   CCGCTGCAGGATAAT                GCGC TCTC GCGC                 TTATAACATTCAGAC  63 8
        gsiB NONE
        gsiC NONE
        gsiD  887047 ..  887058 +  -5.8  -3.54424   GCAGCCTACACGATC                GAGG CGCG CCTC                 TTTCAGGAAGTCGAG  57 458
        bssR  888649 ..  888666 + -12.7  -4.56597   CACAGGTCTGAATAA             GGGGGAG GCGA CTCCCCC              TTTTTACCGAACCGC 100 30
CYD39_RS04205  889957 ..  889969 +  -6.9  -2.73243   CAGCGTTGCAGATTC                GGGCG CGG CGTCC                ATTTCAGACCTACGT  52 98
        dacC  891959 ..  891996 + -18.5  -2.50816   GTTCTCGTAAAATAA   C-CCCATTGCCGGGTGCG CGT CGCATCCGGCAACGGGCG   GTTAATACATCAGAG 100 31
CYD39_RS04230  895471 ..  895481 +  -8.2  -4.10429   CGATGATAATACATT                 GCCG CAA CGGC                 TTTTAACGCATCGTT  77 515
CYD39_RS04245  898098 ..  898146 +  -5.2  -3.14132   AATGATTTCCATCGC CGGGGCGCAG--GTACGCGCGCC CATCAT GGCGC-CGAACAGCAGCGCCCGG TTCATGCGCAGCACA  50 277
CYD39_RS04260  900662 ..  900674 +  -5.5  -3.56704   ACGGCAGATGAAAAG                CAGGT TAC GCCTG                TTCCTTTGATAACCC  57 391
CYD39_RS04270 NONE
        nfsA  901767 ..  901787 +  -7.5  -4.19276   CGCTAAAACCTGCGG            GCCAGTGTA TGA TACGCGGGC            TTTTCAGGGTTTTCA  74 35
        rimK NONE
CYD39_RS04285  903308 ..  903330 +  -8.4  -3.48617   CCTTCCGATAATCAG           GCAGTCGC TGCCAGC GCGGCTGC           TGTTTACACTTTTTT  71 43
        potF NONE
        potG NONE
        potH NONE
        potI  907810 ..  907828 + -11.7  -3.08032   ACTATGGCAATGCGT             TGCCGCG CGAGT CGCGGCA             TCATTTTCAGGGAAG  81 58
CYD39_RS04310 NONE
        rlmC  909555 ..  909597 +   -13  -3.10901   ATCCATAAATAATAA TAACCATGATCGATCG ATAAAAAACTC CGATCGATCGTGGTTA TATATTACCCTATTT  86 86
CYD39_RS04320 NONE
CYD39_RS04325 NONE
CYD39_RS04330  913042 ..  913059 +  -9.1  -3.58343   AGTATTAGTCCGAAT             CGCCTGT TGAT GCAGGCG              TTTGAGACTGATGAC  75 88
CYD39_RS04365  918221 ..  918236 +  -3.2  -2.65264   AACGGCGGTGAAAAC              GCGC CGATGAGA GCGC               TACTGTGGCTGGTGG  42 16
CYD39_RS04370  919072 ..  919103 +  -6.4  -2.56596   ACGCGGTAAATTTCC      GTGATCGCGCAGCC AGGC GGCGGTGCGCTCAA       TGCCTTCGTCCAGCG  53 40
CYD39_RS04410  930140 ..  930155 +    -4  -4.57569   GCCCGTTTCTTACTG              GCG-ATC TCC GATTCGC              TTTTTCGGGCGATCG  69 107
        macA NONE
        macB  934285 ..  934305 + -12.6  -4.21462   GGCGTTAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 98
        clpS NONE
        clpA  937538 ..  937555 +  -9.8  -5.60993   TCACTGCCGTACAAA             CCGGGC CTTAGC GCCCGG              TTTTTTTATGCCGGC 100 49
CYD39_RS04445  938257 ..  938271 +  -5.6  -3.16981   CTCTTCTCCACTAAC               AGGGCA AAT TGCCCC               TTCAATATAGTTATA  52 243
CYD39_RS04495  944154 ..  944170 +  -7.9  -4.36914   AATGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  79 63
         lrp  951154 ..  951183 + -16.5  -2.75577   TGTTAATCCATACAG       CAACAGTGCCGGG GCAA CCCGGTGCTGTTG        TCCGTTTTAGCATCG 100 82
        ftsK  955290 ..  955304 +  -3.4  -4.18494   CGGTAATCGTGAAGT               GCTGGC TCC GCCGCC               TTTTGAGTAAACCTG  60 1
        lolA  956075 ..  956096 +  -2.3  -3.55254   CGTAAGTAGAGGCGA           TGAGTGAGCA ATC TG-TCGCTCG           ATTTTTCTGATAATA  47 32
CYD39_RS04545  957590 ..  957606 +  -9.5  -3.18582   AAAACGTCGCTATTA              CGTAAAC GGG GTTTACG              TTCATCAATACAATC  72 194
        serS  958998 ..  959011 +  -9.5  -5.61596   CTCCTCTTCTAAAAA               GCGCC TTCG GGCGC                TTTTTTTATGCCAGT 100 51
        dmsA NONE
        dmsB NONE
CYD39_RS04565  963155 ..  963193 + -21.9  -3.53811   CAGCTAACGCGTTGA   CGCGTATTCGGCCTGCA GAACG TGCAGGCCGAATACGCC   TTTAGCCGCCATCAA 100 34
CYD39_RS04570  964659 ..  964684 + -12.7  -3.95749   ACTGTTCTCTGAATC         GTATGCAGGAC GTGA GTCTTGCATAC          TATTTGTTTATGTTT 100 40
CYD39_RS04575  966534 ..  966555 + -11.6  -3.53444   ATCCAGACAGCAAAA           CGGCTACC GTCATG GGTAGCCG            TTTAAAAGCGGGTAA  85 276
CYD39_RS04590  968936 ..  968955 +  -4.9  -5.63504   TATAAAAATTAAAAA            GGCCCCA CTGACA TGGAGCC             TTTTTTTGTACGCTT 100 36
CYD39_RS04610  975308 ..  975327 +    -5  -3.70863   ACTGAATGATAAAAC            CGATATTC ACAT GAATAACG             TTTGCCTGATGTCTG  57 142
        serC  976483 ..  976503 + -10.4  -5.48623   CGTTTCTTTTTTCAT            CCCCACGG CCAGT CTGTGGGG            TTTTTATTTCTGTTT 100 43
        aroA  977914 ..  977929 +  -3.3  -5.33785   TTGTTGATGATTTAA              CACAT TGATTT ATGTG               TTTTTTATAATAGTT  81 120
CYD39_RS04625  978738 ..  978762 +  -9.2  -2.90571   AATCATTGTCATCTT          TCGGGCTGGT TTCTC GCCAGCCCGC          TATAATTGCGCAATT  67 40
CYD39_RS04630  979602 ..  979626 +  -7.2  -3.06696   CGAATTTGTAGTACC         CCCGTTG-CAA AGGA TTGACAGCGGG          TATGTTAAACAACCC  60 48
        rpsA  981452 ..  981469 + -14.1  -3.20382   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATCTCACG  95 111
        ihfB  981837 ..  981851 +  -7.1  -5.42514   TTGAACCCGAAAAAA               GCACC GTCAG GGTGC               TTTTTTCATTTATAC  95 56
CYD39_RS04645 NONE
        msbA NONE
        lpxK  987075 ..  987114 +  -3.1  -2.78414   CGTCCCCCAATGCAG CGGCAGTGATGAATTTATG GAGT CATGAAT--GTCATTGCCG  TACCTTTCTCTTTCC  43 41
CYD39_RS04660  988331 ..  988344 +  -3.9  -3.36452   AAATAGACCCTGCAC               CATAA CCGA TTATG                TTAATATTGAAGGAT  50 21
CYD39_RS04665 NONE
        kdsB  989409 ..  989422 +  -5.3  -4.45077   TCAGTGGCGGCTTTC               TCGTA CCGT TACGA                TTTTCCTCATTTTTC  71 122
CYD39_RS04675  990636 ..  990668 +  -7.6  -3.98378   TACCAACAGGAAAGG      GGCGTCGCCGATGG CCTGC TTAACGGCGACGGC      TTCTTCTTCCGTATC  71 245
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB  998689 ..  998704 + -11.8  -5.42975   TTATCATTAGCCTGG              GGCGGC GAAA GCCGCC               TTTTTCTTTATCTGA 100 137
        ldtD 1000815 .. 1000839 +  -4.3  -3.35679   AATGTTTGGCTTCAA         CGGGGCGTTT CGCTGT AGAC-CCCCG          TTGTGGCTGGGGGAG  52 71
CYD39_RS04710 NONE
CYD39_RS04715 1002266 .. 1002282 + -12.3  -5.28176   AAGCAGAATGAAAAA              GCCTGCA ATG TGCAGGC              TTTTTTATCGGTCAC 100 39
        dpaL 1009130 .. 1009181 +  -3.2  -3.03798   GCTCCTACCCGCTGA CTTTCCAGTTTAGTGTTGTT GGCAAAATTCAG GATTACGCTGAACTGGAAAG ATTATTTCTGAGACT  45 175
CYD39_RS04750 1010964 .. 1010983 +  -3.4  -3.55444   CGCGAGAGGCGAAAT            GGCGATAG AGCT CGACCGCC             TTTGGCAGATCAAGG  49 330
        pepN 1014849 .. 1014877 +  -9.6  -5.40072   TAAAGAGGTAAGACA       TGCCCGGTAAGCG TTAG CGCT-GCCGGGTA        TTTTTTTGCCGGACG 100 53
        pyrD 1016058 .. 1016087 +  -5.7  -4.84918   TTAGCCTTTATCAGA       CAACCAGGGCT TTATTTCC GGCGCTGGTTG        TTTTATATTTCTCCA  76 44
        zapC 1017049 .. 1017064 +    -6  -2.88861   CGCCATAAGCTTTTG              CCGGCG CTGT CGCCAG               TATCTCCACCTCATC  51 327
       rlmKL NONE
CYD39_RS04785 NONE
        pqiA NONE
        pqiB NONE
        pqiC 1025476 .. 1025502 + -12.3  -6.20267   GTAATGTAAATTTAA         CCGCTTCAGGT CGTGC GCCTGAGGCGG         TTTTTTTATTTTTGA 100 48
CYD39_RS04805 1025900 .. 1025916 + -13.7  -3.76534   CTTTAGAAAAAGAAA              CCTCCGC ACT GCGGAGG              TTTCGCCTTTATTGG 100 49
        matP 1028999 .. 1029013 + -12.8  -5.24129   GACCAGAGCAAAAAA               CCCCGC GAC GCGGGG               TTTTTTATCAGACGG 100 63
CYD39_RS04835 1031928 .. 1031948 +  -7.5  -3.37959   CTGCTTTAAACCCTC            CAGCGCCTG GTG TACGCGCTG            TTCGTCTTCAGGTTG  61 174
        helD 1036587 .. 1036597 +  -8.2   -3.9122   GGTACAGCATCCCGC                 CCGC GTA GCGG                 TTATTTCAGGCGCTC  72 50
CYD39_RS04865 1038411 .. 1038432 + -10.1   -4.1899   AATAAAAGTTTAAAT           GGCCGGATA TCGC TCTCCGGCC            TTTTACATACAATCA  85 36
CYD39_RS04880 1040812 .. 1040824 +  -3.4  -3.04144   CAGAGGACGGCACGG                TGCA GGAGA TGCA                TATTCGACATCAGGA  45 43
CYD39_RS04885 NONE
CYD39_RS04890 1041990 .. 1042021 +  -5.8  -5.06414   TTTGCCGGGCCTTTC      GGGAACAGACGATA CAGA TAACGGCTGTTGCC       TTTTTCTTCGCCGAA  84 86
CYD39_RS04905 1043494 .. 1043515 + -12.3  -5.04249   CGCCAGATTAAACAA           GGGGTTACC GAAA GGTAGCCCC            TTTGTTTTTTGGGCG 100 36
CYD39_RS04935 1049342 .. 1049352 +  -2.4  -3.93038   CTCCATCTTATACTG                 CTGC TTA GCTG                 TTTGCTGTTCAAATG  54 440
        hiuH 1053381 .. 1053396 +  -3.2  -4.43911   AGCTAATTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 35
CYD39_RS04980 NONE
        hpaE 1059459 .. 1059476 +  -2.7  -3.83026   CAATGGGCGACCATC             CTATCCCA AAA TGGGG-AG             TTTGATATGGGCAAG  52 3
        hpaD NONE
CYD39_RS04995 NONE
        hpaH NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
CYD39_RS05020 1065803 .. 1065825 + -17.8  -3.68359   GCAGGGGTAAACCCA           CGGGCTGACA TGA TGTCAGCCCG           TTATGCTTTTGGCGA 100 49
CYD39_RS05040 NONE
CYD39_RS05045 NONE
CYD39_RS05050 NONE
CYD39_RS05055 1072075 .. 1072108 +  -4.3  -3.83026   TGGGCAAAAACGTTC     TGAATATGCGCCGGG GTTT CCCGGCGCTAACGCG      TTTACTGTAAGAAAA  58 23
CYD39_RS05060 1073453 .. 1073482 + -15.7  -3.34591   CTGCTGCAAAATAGC       CATATGCCCCCGC GCAG GCGGGGGCGTTTG        TGTTATACGTTTTTA 100 27
CYD39_RS05075 1074941 .. 1074958 + -14.1  -6.02919   CGTCATGCGCCACCG             CCGCCGG ATTT CCGGCGG              TTTTTTTGTTTATAA 100 85
        rutR 1076130 .. 1076152 +  -9.8  -3.59979   TTGTCATCAGGCTGG           CATTACCGCC AGC GGCGGCAGTG           TTTACGCTCAGCGAA  77 499
        putP 1082006 .. 1082033 + -12.8  -3.63744   GCGGAATAACCGACA        TGTCCGATAGCA TTAT TGCCATCGGACA         TATTTTACCAGGCGG  95 32
        phoH 1083816 .. 1083830 +  -4.4  -2.67992   TATATCAGTCCTGTC               TTAAAA TAA TTTTAA               TAATGTAATCATCTG  46 161
CYD39_RS05105 1084770 .. 1084806 + -16.1  -3.53224   TGACAGTTTTTTGTC    TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA    TTTCAGGGCCAGGTG 100 107
CYD39_RS05240 1112998 .. 1113027 + -15.7  -4.18018   GTAAAACGGAATCAA       CAGCATCCCGCCC TGAC GGGCAGGGTGCTG        TTTTGCCTGAAGACG 100 37
CYD39_RS05245 NONE
CYD39_RS05250 1119580 .. 1119591 +  -4.4  -3.36327   TCCTATAAGGCGAAA                CAGT AATC ACTG                 TTATGGATAACGTAA  52 20
CYD39_RS05255 NONE
CYD39_RS05260 1122325 .. 1122368 +    -9  -5.31275   GATAACGCAACGATA CGCTGTC-GGTCAGTTTTTCA TTT TTAAAATCTGACCAGACGGTG TTTTTTGTCATGGCG 100 376
CYD39_RS05270 NONE
CYD39_RS05275 1123879 .. 1123890 +  -7.2  -3.84808   ACACAGATTTCAACG                CCGC TGTC GCGG                 TTATTATGGCTTGCC  68 92
CYD39_RS05280 NONE
CYD39_RS05285 1124773 .. 1124787 +  -7.1  -5.24129   AAATAATTCATATTA               GCTCC GTACA GGAGC               TTTTTTATGCCCGGA  91 35
CYD39_RS05295 NONE
CYD39_RS05300 NONE
CYD39_RS05305 NONE
CYD39_RS05310 NONE
CYD39_RS05320 1131905 .. 1131919 +  -4.2  -3.23733   TGTGGCGAAAATTCG               CGGTGT TTC GCACTG               ATTTTCTAGAATGAA  48 10
CYD39_RS05325 1132188 .. 1132207 + -12.8  -4.34402   AGCCCGATGACAAAA            CGCCCGGT TAAT GCCGGGCG             TTTTGCTGTGGAGAA 100 31
        yedQ 1134409 .. 1134421 +  -4.7  -3.14211   TATCGCGCCAGATCA                GCGAC ACC GACGC                TTCATGCAGACGGGT  47 375
        dsrB 1135806 .. 1135817 +  -4.4  -4.28115   TGTCAGCCGCACTAC                GTGA TAGA TCAC                 TTGTTTATTATGCGT  66 118
        fliE 1148253 .. 1148271 +  -5.4  -3.91792   GACTCCAATAATGGA             GATGAAAA TAA TTTTTATC             ATTTTTTTGGCTTCT  61 478
CYD39_RS05440 1150698 .. 1150708 +  -2.4  -3.30554   GCGTTGCAGAAGAAC                 GTCG CTT CGCC                 TTGATCATTAGTTAC  43 117
CYD39_RS05465 NONE
CYD39_RS05470 1156210 .. 1156225 + -10.4  -5.26875   GTGGTACACAATCAA              GGCAGC GAAA GCTGCC               TTTTTTAATTCCGGA 100 64
CYD39_RS05475 1157463 .. 1157486 + -10.2  -4.04318   TGACATAGTTTTGTT          CGGGGTGGGC TTTT GCGCATCCCG           TTTATCCTATCTGGC  82 33
CYD39_RS05480 NONE
        fliZ NONE
        tcyJ 1159998 .. 1160015 +  -5.5  -5.67283   ATGTCAGCAAACGGA             GGCGCGTG AAT CG-GCGCC             TTTTTTATTTCCGTT 100 95
        dcyD NONE
        tcyL NONE
        yecC 1162696 .. 1162707 +    -3  -3.39327   GTTAATTTAAATCAT                TCAT AATA ATGA                 TTATCAATATCAAAG  46 215
        sdiA 1163493 .. 1163519 + -12.2   -5.1861   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC 100 58
        uvrY NONE
        uvrC NONE
        pgsA 1167296 .. 1167308 +  -4.1   -3.5394   ACGCGGAGATTTGCT                TGATC AGT GATCG                TTTCGCCGCAAATTT  52 16
CYD39_RS05540 NONE
CYD39_RS05545 NONE
CYD39_RS05550 1167801 .. 1167814 +  -8.1  -5.66684   AGCAGTGTCGTGAAA               CCACC TACG GGTGG                TTTTTTTGTGCCTTC 100 70
CYD39_RS05555 NONE
CYD39_RS05560 1170154 .. 1170173 +  -3.5  -3.95324   GATGTGATTATGTGC            CTCACAC ATTGAA GTGAGAG             TTATTGTTGGCGGTA  55 187
CYD39_RS05565 1170552 .. 1170571 +  -6.4  -4.52589   CATGAGTATAATATA            GCGAGAAA CCCA TCTCTCGC             TTTTGTGTGGGGCGA  76 46
CYD39_RS05570 1171462 .. 1171498 + -18.1  -3.66874   CGGCCATAGCGTGAT    GATTATCGAGCCTGGAC GGT GTCCGGGCCCGGTAATC    TTTGCCTGGCGTTAA 100 52
CYD39_RS05580 1173399 .. 1173421 +  -2.8  -3.59867   GTCGGATAATCCTGG          CTGG-TCAT TGCGGC ATGAGCCAG           TTCATTAATTTTTTG  49 237
CYD39_RS05595 1175574 .. 1175593 +  -9.2  -3.23692   GCTTCATCTGCCAGA            CGCGACAG CGTG CTGGCGCG             TTGCTGATAATCCTC  65 400
CYD39_RS05605 1176974 .. 1176992 +  -2.4  -3.61398   ACAGGCTGAACATAT             CTATTATC CCT GGTAATCG             TTATTCACCCAGGGC  49 10
        otsB NONE
        otsA 1180185 .. 1180202 +    -4  -3.55761   TTTCGCCTGAACAGG             GCGGGC GATAGA GACCGC              TTTAGCCAGTAGCTG  51 388
        flhD NONE
        flhC 1182012 .. 1182035 + -15.4  -5.86332   TGGACAAACACTCCA          GCAGCGGTAA GTCA TTACCGCTGC           TTTTTTTTGCCTTGC 100 52
        motA NONE
CYD39_RS05650 NONE
        cheA 1185925 .. 1185940 +  -3.2  -2.75064   CCGCGAACAACGTAT              GGCG ATCACAGC CGCC               TGATTGAGTGAGAAG  43 7
        cheW 1186473 .. 1186501 + -23.3  -3.07233   CGTCGCGTAATAACG        TTGCCGGATGGCG TCG CGCCATCCGGCAA        TATTCACCGTTATGC 100 31
         tar 1188472 .. 1188494 +  -6.9  -2.76483   GTAATACGGGAAGCA          TGGCGCTGCC GCAG GGC-GCGCCC           GTTGTACTTTGAATG  55 132
        cheR NONE
CYD39_RS05675 NONE
        cheY NONE
        cheZ 1191553 .. 1191584 + -13.1  -3.10493   GAATCCGTCAACCCG      GCCGGATACGAGA CTTTCT TATCGTATCCGGC       TATCTCTATTAACGC  86 78
        flhB NONE
        flhA NONE
        flhe 1195400 .. 1195448 +  -8.3  -3.53761   GGTAGGTTGCCGGAC TCTTTGTGTTTTTGCCATTTACG CTC TGGCAATGGCAGAAACAAAAAGG TTTCCGCCCGGCTTA  71 117
CYD39_RS05705 1196815 .. 1196840 + -10.3  -4.09685   TTCGCATGATGGGCG         CGGCGGTAACG CCGT CGCTTCCGCCG          TTTTCCAGAATCAAG  86 156
CYD39_RS05720 NONE
CYD39_RS05725 1202151 .. 1202175 +   -10  -5.71983   TGCTTGCTCGTACCA          GGCCCCTG CCAATTCAA CAGGGGCC          TTTTTTTCTCCTTCA 100 73
        aspS 1208061 .. 1208074 +  -3.7  -2.80816   GTGATATCGCGGCGG               CCCGC AGGG GCGAG                TCTCATCCGTCACCC  45 69
        nudB 1208553 .. 1208573 +  -3.2  -5.40474   AAGAGTTTGTCATTA           ACGTCGCCT GAAA AGGCG-CGC            TTTTTTTGAGGAAAT  81 15
CYD39_RS05765 NONE
        ruvC 1209898 .. 1209922 +   -10  -3.17075   TTGCGCTAAATCATT          CTCCCTCAGC CTCGC GTTGAGGGGG          TTCAATTCCACAGGC  74 32
        ruvA NONE
        ruvB 1214082 .. 1214100 +  -3.8  -3.21934   CGCCTGAAGTCGCTG             CGCTCA TCAGACC TGGGCG             ATTTTGTAGGCCCGG  48 41
        znuA NONE
        mepM 1218057 .. 1218079 + -13.4   -5.8901   AAATGCGCTGACAGA           GCCGGTACGC GAT GTGTGCCGGC           TTTTTTGTTTTGTGT 100 42
        msbB 1219134 .. 1219151 + -11.3  -3.96148   CATCAAATAAATAAA             GCCTCTC GTAA GAGAGGC              TTTATGCTGACAAAC  91 31
         zwf 1223533 .. 1223558 +  -5.4  -5.80364   TTTTTGCACTTTTAA         GCCTCGTGTGG ATTCA CC-TGCGAGGC         TTTTTTTATTACACT 100 105
         edd NONE
CYD39_RS05840 1226250 .. 1226282 + -11.4  -3.08046   GTCTGATAAAAATGC     GCTAACGTCGCCATC AAGC GATGGCG-CATTAGC      CTTTTACCGTCACGC  79 97
        yebG 1227889 .. 1227899 +  -4.6  -4.41206   CTGAACCCGTACTTG                 CGCT CCC GGCG                 TTTTGTACCATGCTT  66 37
CYD39_RS05855 1228301 .. 1228313 +  -5.5  -4.17048   TAAGCCCCGCTAGCA                GCGTA ATT TGCGC                TTCTTTTGCCGGAAC  67 28
CYD39_RS05860 1229077 .. 1229091 +  -5.6  -3.39908   TTAAGTAACATGTTT               CGCTTG CAT CATGCG               TGTCTTTTGCCACCC  56 51
        ptrB 1231324 .. 1231358 +  -8.6  -3.16676   CGCATAGACGTGCGC     CCGCAATGGCTTGTGA GCG TCGCGGGTTATTGTGG     TGTTCCATTGCTGCG  67 34
        yobA NONE
        copD NONE
CYD39_RS05895 1235033 .. 1235062 +  -7.3  -5.54338   AAGAGCCATTTCCCT       G-GACCGAATAC AGGAATC GTATTCGGTCTC       TTTTTATTTTCCTTA 100 234
CYD39_RS05905 1235775 .. 1235791 +  -2.2  -3.63054   ACCAGGGAAAGAGGA              TGTCCG CCAGA CAGACA              TTATGTGTAAATTTA  49 97
CYD39_RS05910 1238363 .. 1238375 +  -3.4  -3.27923   TACACCACCCGCTAT                GAAG ACCTG CTTC                TTCCTGATGTTAAGG  48 146
CYD39_RS05935 1239881 .. 1239895 +  -2.8  -2.72511   GTACCAGCTCAGACT               CCAACT GAC AGTTTG               CTTTAAGCGAGTAGC  41 18
CYD39_RS05940 1240838 .. 1240859 +  -7.3    -3.737   CTCAGTCATCCCGCC           GCGTGTACT GACC AGTACAGGC            TTTCCTGCCCCATTG  68 426
CYD39_RS05960 1242768 .. 1242785 +  -3.4  -3.45054   CAAGGTAATGACGAT             GATCGC GAAAAA GTGATC              TTGTAAATTCTGACC  50 10
CYD39_RS05965 1243037 .. 1243057 +  -9.7  -3.58329   CCAGTAACCACTACA            GAGCGTCAG GGG TTGGCGCTC            TTTGCCAAATGTTTG  77 34
       sopE2 1247211 .. 1247242 +  -6.6  -4.75288   GTATATATTCATTTT      TATGGCGACGCTTT TAAC AAAACGTCGTCATC       TTTATTTTAATATAA  80 98
CYD39_RS06000 1247612 .. 1247661 + -19.4  -4.66318   ATATTGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACAC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATAAT 100 50
        pphA 1248744 .. 1248759 +    -6  -4.44608   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  76 319
CYD39_RS06035 1255181 .. 1255200 + -12.2  -3.15996   GTAGCAATTACTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCTG  83 53
        proQ NONE
CYD39_RS06045 1258013 .. 1258034 + -13.1  -6.06723   ATAAGTAACGCTAAA           CAGGCACAA AAAA TTGTGCCTG            TTTTTTTTTAACAAG 100 33
        htpX 1259105 .. 1259122 + -12.7  -5.42259   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 50
        kdgR 1261499 .. 1261521 +  -9.9    -5.626   TGACGTTAAAAAAAA           GCAGCTACG AAAAA TGTAGCTGC           TTTTTTTATAACATC 100 56
        mgrB NONE
CYD39_RS06075 1262857 .. 1262873 +  -2.9  -5.26907   AGAACATCACAAAAA              GCGGTGT CGA AAATCGC              TTTTCTTTTCTATTA  76 304
CYD39_RS06080 NONE
        cspE 1263641 .. 1263659 + -12.4  -4.89009   AGCCTCAGATATAAA             GCCTCGCT AAA AGCGGGGC             TTTTTAATTCAATAT 100 74
        ftsI 1265570 .. 1265597 +    -7  -3.53224   TAAAGGATTTTCCCG        GGGCGCAATT CGCGTTAC ACTTGCGCCC         TTTAGCGCCCCAGTC  62 38
        rlmA 1266442 .. 1266465 + -10.4   -2.5655   CGTTAACCGTGAAAA          T-GCGTCCAGA GGA TCTGGACGCCA          ATTCCTATCAGTACG  70 35
        yoaE 1272689 .. 1272741 + -12.5  -3.09635   ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT  81 75
CYD39_RS06150 1278418 .. 1278428 +  -2.4  -4.56597   AGAATACGTGACTTA                 CTGG AGC CCTG                 TTTTTCCAGCACCGC  65 209
CYD39_RS06160 NONE
        tsaB NONE
CYD39_RS06170 1282053 .. 1282077 + -14.4  -2.56596   GTTTTATCAATAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTCATAGAGAC  87 47
        fadD 1283945 .. 1283961 + -11.5  -5.75342   TCAGCTAACGAGAGA              CGCCGGT TAA GCCGGCG              TTTTTTTTGGCGCGA 100 49
CYD39_RS06180 1285194 .. 1285209 +    -9  -4.72272   TAAAAAAATAAAAAA              GGCAGA TTCT TCTGCC               TTTTTAATCCAGGAA  90 98
CYD39_RS06200 1287484 .. 1287494 +  -8.2  -2.55544   CGTTAAACGGTATTC                 GGCG CCG CGCC                 TGAATTCCATCATGA  59 59
CYD39_RS06205 NONE
CYD39_RS06210 1288814 .. 1288826 +  -3.3  -4.34866   AAATTCCGTCACCTG                GCGTT ATC ACCGC                TTTCTATTCTTCCCT  62 117
CYD39_RS06215 1289232 .. 1289260 + -12.4  -5.17054   TGTGCTATTAACCAA        CCGCCTGATGCA CCGTC TGCGCCAGGCGG        TTTTTTACATCTTCT 100 46
CYD39_RS06220 1290076 .. 1290091 + -10.4  -2.98823   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC  73 524
        fadR 1293537 .. 1293548 +  -4.4  -4.27617   GTTGCTCAGGTTATA                CTGT GACG ACAG                 TTTTGATCGAATCTC  66 309
CYD39_RS06250 NONE
        dadX 1297579 .. 1297599 +  -3.9  -3.90241   GTCCACTTGGGGGCG            GGTCGAC GTTGCCA GGCGACC            TTATTCTGCTTCGTC  57 67
        emtA 1301207 .. 1301264 + -10.7  -3.14257   ATAATCCGCTGCAAC TC-CCGCTCCACCGCC-GGGCTAACGTT AAGGA AACGAAAGCTCAGGCGG-GGAGTGGTGA TCGTTTCATTTTTCC  69 106
CYD39_RS06280 1302317 .. 1302344 +   -12  -2.62184   TGCAAAACGTGTAAG        CGTTGACCCGGT CAGC GCCGGGTCAACC         TACTATAAACACGCG  79 45
CYD39_RS06340 1316281 .. 1316296 +  -3.2  -4.43911   TTGACGCTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 232
        ychH 1320778 .. 1320804 + -10.1  -2.65388   AGCTAACCGGTTCAG        GCCCGGTAAGCG TTAT CGCC-ACCGGGC         ATTGTCCATTAACTG  70 35
        hemA 1326896 .. 1326908 +  -2.7  -3.59262   CACACACCACACTTT                TTTAC AGG GTGAA                TTTACGCCTATGAAG  50 44
        prfA NONE
        prmC 1328809 .. 1328819 +  -2.4  -3.05597   TGGTAATGAACGTGT                 GACC TGC GGAC                 GTTTTACGCCATGAC  42 1
CYD39_RS06405 NONE
CYD39_RS06410 NONE
        kdsA 1330947 .. 1330968 + -10.2  -5.36441   TTTTAGCTTGTGTAG           GCCGGATA AGATAC TATCCGGC            TTTTTTATATCAGGC 100 48
        chaB 1333017 .. 1333031 +  -2.8  -4.37886   TTTGCATGGATAACC               CTTCTC CTT GAGAAA               TTTTGTCGGCAATGG  60 467
CYD39_RS06435 1334781 .. 1334795 +  -5.7  -3.19192   CTTCAGAATATCGCG               CTCAC GCGGG GTGAG               TTGCGTTACATCGCG  54 197
        narK 1338804 .. 1338822 +  -8.8  -5.81412   TTTTGATTATCCTTT             GCGCGG CGTTAGA CCGCGC             TTTTTTTTACCTGCA 100 42
CYD39_RS06455 NONE
        narH NONE
        narJ NONE
        narI 1345855 .. 1345870 + -10.4  -5.65177   TCTCGATGCCCTAAA              CTCCGC TTCG GCGGAG               TTTTTTTATGGCTGT 100 46
CYD39_RS06475 1347756 .. 1347774 +  -8.8  -3.92373   GCTTCGCCCTTCGGG             CCGTTGCC GTT GGCAACGC             TTTCTCGCTGCGCTC  76 176
        rssA 1351372 .. 1351389 +  -8.4  -3.02144   TTCTGACAGGCGCAA             GCGGCA ATACCA TGCCGC              TATTGCGGCGGGTCA  66 68
        rssB 1352624 .. 1352634 +  -5.4   -4.0056   CGACGAGTGTTACTA                 TCTG CGG CAGA                 TTTATAAGTATTTGT  63 83
        galU 1353705 .. 1353723 +  -9.5  -5.64274   AATTTTTTAACAGAA             GCGCTGG TAAAT CCGGCGC             TTTTTTTATGCCTGG 100 53
CYD39_RS06545 1355653 .. 1355670 + -12.7  -3.85864   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 176
CYD39_RS06555 1359523 .. 1359545 + -12.6  -3.36492   ACCTGTTGATTTACA           GGCGGTGCCC TAA GGGGGCCGCC           TTGTGACATTCCCAG  90 47
        oppA 1361918 .. 1361943 + -16.3  -2.80583   ACATTAATGGCAAGA         CATGGGACAAC TGCG GTTGTCCCATG          GTGTCTTTTTTCATC 100 34
        oppB 1362926 .. 1362940 +  -2.8  -3.20616   ATGTGCTCTATGCCG               TTATCG ACC CGAAAA               TTCGCTATTGATACT  45 0
        oppC NONE
CYD39_RS06575 NONE
        oppF 1365901 .. 1365921 + -12.6  -4.21812   CCGTTATAATCGCAA            GGGCTGAC AATTC GTCAGCCC            TTCTTTTAGGTGAGG 100 32
CYD39_RS06585 1367118 .. 1367135 +  -3.4   -3.6579   GCCTGCTCAAGCGTT             TCGTCT TCAGTC AGGCGA              TTGTTCAGATCCATT  51 365
CYD39_RS06600 1368960 .. 1369005 +  -5.4  -4.09511   TTTGCGATTCACGGT GTGTGAGCCAGAAAGGGCACCG TATG CGGTGCCCAA-CAGGCT-ATAC TTTTCAAAAGATCTT  65 20
        tonB 1370544 .. 1370572 + -10.3  -2.54504   ATGTCATTCCTTCCA        CGCGTACGGTT ACAACCC GACCGTGCGCG        ATCTCTTTGGCCAGT  65 312
        ompW 1373921 .. 1373933 +  -9.1  -2.56271   GCTACCTCGCGGATC                GTCGC CTT GCGAC                ATGTTGTAGTACACG  59 323
CYD39_RS06690 NONE
CYD39_RS06695 1384771 .. 1384786 + -11.8  -2.69188   ACGCGGCCTTAAAAT              GGCGCG GCAA CGCGCC               GTTCATTCTCCTGTT  79 60
        rluB 1385753 .. 1385782 + -10.8  -3.14931   AATCATCAGACAAGA       GG-GTTTGTGCCG GATGG CGGCGCAAACGCC       TTAATCCGGCCTACG  78 66
        sohB 1388440 .. 1388468 + -16.1  -2.56596   GATGTAAACCGCTAT        TGCCGGATGGC ATTCAGC GCCATCCGGCA        TGGATTAATCAACCA 100 34
CYD39_RS06725 1391753 .. 1391770 + -14.1  -5.37043   CCACTGTAGTCAAGC             GGGCCGC GTAA GCGGCCC              TTTTTTATATCCCCT 100 54
        cysB 1393253 .. 1393264 +    -3  -4.20516   AATAGTTATCTTGAG                TCAA AAGA TTGA                 TTTATTCACTGGCAA  58 169
CYD39_RS06735 NONE
CYD39_RS06740 1393914 .. 1393939 +  -6.9  -4.88228   TCTAATCTCGTCAAA         GCCCGGTAA TGCGTTAT TTATCGGGC          TTTTTCATCTTCGCT  80 238
        acnA 1396770 .. 1396800 +  -9.6  -2.84051   GAACTAAAGCCGTTT       ATCGGGCCTGCC GTAAACA GGCAGGCCCGCG       CTTTAATACCGGTGG  70 34
        pgpB 1398419 .. 1398450 +  -5.2  -3.54543   CTGATGGCGGGCGCA      TTTCCA-TTTCGCGC GAG GCGGGAAAATGGTAA      TTTAGAAGGCTGGAT  56 77
CYD39_RS06760 NONE
        lapB 1400083 .. 1400110 +  -2.8  -3.64703   ATCGGCAACCAGAGC        TTATCAGGTT GTCAATCG AACCTGTTAA         TTTCCCTGCGCCGCA  50 107
        pyrF NONE
        yciH 1401710 .. 1401720 +  -5.4  -3.53836   GGGTATATCACGCAG                 GTGA TAG TCAC                 TTCCTGTTATTTTGC  57 480
CYD39_RS06825 1411862 .. 1411885 +  -2.4  -5.20534   ATATATTGTTTTTTT          CGATCATTTT TTAT ATATTGATCG           TTTTTATTGATTGAT  74 403
CYD39_RS06830 1412986 .. 1413012 +  -7.8  -3.85698   TTTAGGGCGTAAAAT         CAGCGCGCGGGC CAG GCCCAGACGCTG         TTTCTGCCCCGGCGC  68 353
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
        pspE 1421199 .. 1421215 + -10.8  -3.80018   TACTCATACTAACCG              CGGCGC TTAAT GCGCCG              TTGTTGATCTCTCCG  85 57
CYD39_RS06890 NONE
CYD39_RS06895 1423781 .. 1423815 +  -4.9  -3.40674   AAATGACCTTCCACA    GGGCGCTGATTGCCTG GCTT TACGCCG-CAGCGCCC     GTTTTTCCGTCATGC  54 35
CYD39_RS06900 1425468 .. 1425491 + -12.5  -3.28712   AAGAGTAGAAAAAAA          GAAGGCCTC CGGATA GAGGCCTTC           TTGTGACAAAAGAGC  90 33
CYD39_RS06910 1427384 .. 1427428 +  -2.8  -3.69354   CGTGAAAAGAGACGA CCCAGGCGGGTTG-GAGTCGA TGAA TTAACTGGCAAAGCGCCTGGG TTTCCGGTTCTGAGC  51 272
CYD39_RS06920 1429718 .. 1429736 +  -2.3  -3.55889   GGCATGGGGATTAAG            CGAGCGCC TGAT GCCGC-CG             TTCTCATTGCTGTGT  47 100
CYD39_RS06930 1431940 .. 1431962 +  -2.6  -3.60805   TTTGCTCTTATCATG           GCGTCTTTAC GAC GAAAGGGTGC           TTTAGCGTGGAATAT  50 272
CYD39_RS06935 1433175 .. 1433191 + -12.3  -2.83522   GGCCAGGCCGCGCGC              CAGCCCT TGC AGGGCTG              ATTTACTGGCGGCGT  72 362
CYD39_RS06945 1434382 .. 1434394 +  -5.5  -3.06915   CCTAATCATCCATCT                TGCCG TTG CGGTA                TTCGGTAAAGTACAT  52 97
CYD39_RS06950 1434704 .. 1434722 +  -5.2  -3.87994   TTGGGAGGCCGTGTC             CAGTATGG GTA CCGGACTG             TTTCTGGGCCTGAAT  61 54
CYD39_RS06965 1438376 .. 1438388 +  -5.5  -3.36878   GAATAAACGCGCTAT                CCGTC GCT GATGG                TTATCGCTAAATAAA  56 16
CYD39_RS06970 NONE
CYD39_RS06975 1441308 .. 1441322 +  -2.2  -4.52873   AAACTATATTAATTA               TTATGT CTA ATATAA               TTCTTTTTATCACCA  61 40
CYD39_RS06980 1442022 .. 1442032 +  -5.4   -3.7829   GCAGGCATCCTCCTG                 TGTG CCC CACA                 TTTAATACATATACT  61 98
CYD39_RS06995 1443790 .. 1443831 + -13.1  -5.18371   CGTCATCCGGACAGG GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTGTCGCA 100 63
CYD39_RS07005 1445490 .. 1445500 +  -6.8  -3.04248   GGTCGCAGCGCAGAT                 GGTC AAT GACC                 TGTTCGGCCGTGTTC  54 157
        smrA 1448833 .. 1448846 +  -2.3  -4.44245   ACCGCCAGCGCAAGC               TCGCG CGAA CCCGA                TTTTATGCCTGATAT  59 63
CYD39_RS07030 1450379 .. 1450397 +  -7.4  -5.03145   ATACATGTTTGGTAA             GCGCCT GTTGCTA AGGCGC             TTTTTTCGCACGTTC  86 43
        zntB 1451680 .. 1451699 +  -9.3  -5.83822   ATTGATTCGTACGAC            GCCGACT TAGATT AGTCGGC             TTTTTTTTGCCTGTA 100 215
CYD39_RS07040 NONE
        dbpA 1453355 .. 1453392 + -13.5  -3.00106   TATTAAAATGATCGA   TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG   ATTATTTCACTTCGA  87 30
CYD39_RS07060 1458468 .. 1458489 +  -6.7  -3.71527   GTTGTTATCTCTCGT           GTATGAAAG ATTG CTTTTATAC            TTTAAATAATTCGAG  66 65
CYD39_RS07065 NONE
CYD39_RS07070 1459060 .. 1459089 +  -9.3  -2.60496   ATGATGATGGTTGAT       TTGAGCCCGCA CTCTCTTA TGCGGGCTCGG        GTATTTAGCGCACCA  66 44
CYD39_RS07090 1464387 .. 1464400 +  -3.7  -4.24002   GCCAAAGCTGAGCTC               CGGGC CGGT GACCG                TTTTACCGTTTACGC  64 336
CYD39_RS07105 NONE
CYD39_RS07110 NONE
CYD39_RS07115 1469086 .. 1469098 +  -2.7  -3.75153   TGGGTAATTTCTGAA                TACGA AGG TTGTA                TTTACATTAGGCGAA  52 83
CYD39_RS07120 1469796 .. 1469823 +  -5.6  -3.60792   TGTCTTTATGGATAC       CGCCGCGGCTGG AGAGAA CCA-CCGCG-CG        TTTACCGGTTACCAG  55 201
        hrpA NONE
CYD39_RS07135 1475234 .. 1475250 +  -2.3  -4.06687   AAGTGCGACCACCAT              TTCATAA ATT TGATGAA              TTATTTATAAAAGCT  55 70
        cybB 1475838 .. 1475851 +  -3.8  -3.86897   GTAAGCGTGACTGAC               CGTC CTGTAT GACG                TTTGTCGCAGGTGGG  57 27
CYD39_RS07175 1483441 .. 1483456 +  -5.4  -3.85362   TTAGTTTTTAACAGG              GCATTG TGAG CGATGC               TTTCATCCTTAAGTT  61 444
CYD39_RS07185 1485766 .. 1485790 +  -3.5   -4.0098   GCGAAATATACGACC          GCTATTAGCCA GAC TGGCTGTTAAC          TTATTTACCTTCCCA  58 286
CYD39_RS07195 NONE
CYD39_RS07200 1487983 .. 1488007 + -15.7   -4.5538   CGATAACTGATTCAT          CCGCCAGCGGA TTT TCCGCTGGCGC          TTTTCTGAATTTTCT 100 31
CYD39_RS07205 1489778 .. 1489811 + -15.3  -3.25823   TTCCTTTAGTAAGCG     TCGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCGG     TTAATGTCCGACAGC 100 32
CYD39_RS07215 1492401 .. 1492419 +  -3.8  -2.62184   CTTTAAAAGCGGTAA             GCTTCACA GGC TGTGAGGA             TACTGTAAAAGGAAG  44 35
CYD39_RS07220 1493988 .. 1494000 +  -5.5  -3.79906   GCGTGAGGTTTACAT                CCGAT TAG GTCGG                TTCTTATCGACATAA  61 65
CYD39_RS07225 1495809 .. 1495819 +  -3.2  -3.25356   CGTTATGTCGACGAT                 CGTA TCA TGCG                 TTAGTCAGTTTGCCT  46 11
CYD39_RS07230 1496762 .. 1496774 +  -6.3  -4.44245   TACTACTTGAGCTTG                TAACC AAC GGTTA                TTTTGTCCCTGATGT  73 193
CYD39_RS07255 1502454 .. 1502477 +  -8.8  -3.62046   ACCGTAAGCAATGAA          GGCCCGGC TTGCATCT GCCGGGTC           TTATTCCCGACGTCC  72 34
        rimL 1509711 .. 1509722 +  -4.4  -4.25681   GCAGTCACAGATCCA                GACA TTAT TGTC                 TTTGTTGCCTTCGAT  66 397
        tehA NONE
        tehB 1512112 .. 1512129 +  -2.7  -2.78863   CATTTTTAGTGCATC             CAGAATG ATTT CGTTTTG              CTATTATTTCCTTTG  41 118
CYD39_RS07320 1512909 .. 1512928 +  -2.8  -3.26545   CCATCAGCCAGACAA            CGATGGGCG GCG CGTTC-TCG            TTAATACTGTGTAGC  45 91
CYD39_RS07330 1514744 .. 1514763 +  -3.5  -3.05384   CGCTTCTGACTACAA            TAGCCGC CATTTC GCTGCTA             TTGGATAAGAAAGAC  45 66
CYD39_RS07335 1517229 .. 1517244 +  -6.2  -2.80443   CCAGGGGATTGTAAG              CCATAA TAAT TTATGG               TGTGGTCAACTCTGG  53 508
CYD39_RS07350 1519120 .. 1519133 +  -3.7  -3.73914   ACGCCCGTGATCCGC               CGCTG CAAC CTGCG                TTCTTACTGAATAAT  55 31
CYD39_RS07360 1520464 .. 1520481 +  -3.5  -4.10161   AAAGCACCATAACAG             TTAGCAA ATCA TTGTTAA              TTTTAACAACTGATA  57 82
CYD39_RS07365 1522007 .. 1522037 +  -6.1  -3.53855   CCTGACTAAATTTCC      CGAGTGTGCCGGGT GAGC ATCTGGCGCGC-CG       TCTATTTTTAGGAAA  60 65
        patD 1523842 .. 1523861 +    -5  -3.00022   GAGAACGTTTTGCTG            TCAAGGCT GATA AACCTTGA             TGTGTGTCAAATAAA  51 340
CYD39_RS07380 1524102 .. 1524130 +  -5.2  -4.57073   TTCGCTTTTCTGACC        TCAAGCCCGATA CAGGT TACCGGGCATGG        TTTTTCCGCCAGGTC  71 28
CYD39_RS07400 1531509 .. 1531522 +  -4.5  -3.14051   TGGTTCATCAGCAGG               CGTCCG GCG CGG-CG               TGTTCATCAAGCTGG  50 487
CYD39_RS07415 1533501 .. 1533513 +  -6.2   -2.7365   CACTTTTATTTATTT                GGCC GTTCA GGCC                TGGATTATCTTTTTT  53 261
CYD39_RS07430 1537784 .. 1537805 + -10.1  -2.80821   CTCTGTAAATAGGGT           ATGGAGGGG GAAA CCCCTCCAG            TCATCTCTTTAAACG  71 33
CYD39_RS07435 1538150 .. 1538160 +  -2.4  -3.01712   CTGACTAAGCATTGG                 GCGC GAT GCGG                 TGTTGGCGGCAACGC  42 33
CYD39_RS07445 1541060 .. 1541072 +  -6.3  -3.01924   CCAACGCTATTCCAC                GGATA GGG TATCC                TGTTGCGCAGCGATA  56 228
        nhoA 1542209 .. 1542235 +  -2.9  -3.66178   AGGCCATGATGGACG        AGCC-ATGCCCC CATC GGGCCATTGGCG         TTTCCCGTTACCGGA  51 248
        smvA 1554009 .. 1554023 +  -4.2  -2.82742   CAACGACCAGTGAAC               GTCTGC ACG GCATAC               TCCTTATGACCGAGT  45 483
        fdnG NONE
        fdxH NONE
        fdnI 1561481 .. 1561506 + -10.5  -4.38171   TCGCGATCTGATAAA         TAAGGCGCTAT CCTC GTAGCGCCTTG          TTTTCATCTGCTGTC  87 46
CYD39_RS07545 1566232 .. 1566265 + -10.3  -4.66833   TCACCTCAACGCGCC     GTAGACCACGTCTGT GGCT ATTGTCGTGGTCTAC      TTTTTCGCCTTAAAA  91 144
        hdeB 1566814 .. 1566831 +  -6.2  -4.53036   AAACTGATATCAAAA             CCCGGC CTGTGT GTCGGG              TTTTACTATTTGTGA  76 45
CYD39_RS07555 1567793 .. 1567803 +    -4  -2.97158   CGTAAAGATTAGCCC                 CATA GTC TATG                 CTTGTTCTTCGGATG  46 96
        treZ NONE
        treY NONE
        glgX 1574318 .. 1574334 + -10.8  -5.14965   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT 100 51
CYD39_RS07590 1580023 .. 1580046 +  -5.2  -2.60212   CTCAAACAATCATTT          CGGCTTTGCT GATA AGCACAGCGG           CTTGTCCGGTGGTGA  48 102
CYD39_RS07605 NONE
CYD39_RS07610 1582883 .. 1582899 +  -6.5  -5.76633   ACTGACAGTGACGAA              TCGGTCA CAA TGGCCGG              TTTTTTTATGTCTGC 100 44
CYD39_RS07625 NONE
CYD39_RS07630 1585152 .. 1585183 + -12.3  -4.07885   ACGTTATGCTAAAAA      GGCCGTTGCGGGA TCCGAT TTTCGCAGCGGCC       TTTTCAACAGCCGTA 100 73
CYD39_RS07635 1585745 .. 1585759 +  -4.2   -3.3334   GAACGCGTCATTGAG               GTCAAC ATT GATGAC               TTATAAGCTGGCATT  50 5
CYD39_RS07640 1586151 .. 1586165 +  -2.8  -4.63218   CTATGACCTACGTTG               TGTATG TGA CATTCA               TTTTATTCCCGCCCG  65 137
CYD39_RS07645 1586618 .. 1586639 +  -8.1  -5.27476   TTATTCTCGGCAAAA           CCGGTAGCAT TAT ATG-TACCGG           TTTTATTTTATTCAC  91 44
CYD39_RS07660 NONE
CYD39_RS07665 NONE
CYD39_RS07670 1592851 .. 1592882 +  -7.4  -2.63715   GTCTGATTTTAAATA      ATTTTATCCATCAC GCTT GCGATGGATAAAAA       TCCTCTGCGATAAAT  57 55
CYD39_RS07675 NONE
CYD39_RS07680 1595299 .. 1595326 + -17.1  -3.71848   AGTTACGGCAAGCTC        CACCGCATGGC ATGACC GCCATGCGGTG         TTATTCATCGACAAA 100 40
CYD39_RS07695 NONE
CYD39_RS07700 NONE
        cybH NONE
        hybD NONE
        hypC NONE
CYD39_RS07720 NONE
CYD39_RS07725 NONE
CYD39_RS07730 NONE
        hypA 1605123 .. 1605136 +  -6.7  -4.11751   TCTGTATTAGGATTC               GATGG GTTG CCATC                TTTTAGCAGATTGAT  70 218
CYD39_RS07745 1607466 .. 1607492 +    -8  -3.06183   TTTGCTCTTCAGGTT         ATGGCGCAGA TGAACAT TCTGCGCCAG         TTAAGTCGAGCTCAG  62 43
CYD39_RS07770 NONE
CYD39_RS07775 1614109 .. 1614123 +  -4.2  -3.40403   TTGCTTTTCGCTTCC               GGCG ACTCATG CGCC               TTCTGCTGCGGGAAA  51 433
        marR NONE
        marA NONE
        marB 1615760 .. 1615778 + -12.4  -5.56568   CACCTTTAACCTCTT             TGCCCCGT TTT GCGGGGCA             TTTTTTTAGTACTGT 100 32
        ydeE 1618172 .. 1618185 +  -3.8  -3.49618   ATTACCCCTACGCAA               CAGG CTATCA CCTG                TTAATTATCTGCAGC  52 8
        mgtS 1618558 .. 1618592 + -16.5  -4.55287   TAATCCCTCGCAGAG    CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC     TTTTGTCTGGATGGC 100 51
CYD39_RS07820 1620327 .. 1620345 +  -5.2  -5.03145   ATTTCCGTCCGCCAC             TGTGGCTA TTC TGGCCACC             TTTTTTACCCGCTTC  82 171
CYD39_RS07830 1621256 .. 1621266 +  -2.4  -3.02402   CTTTATTAAATAAAC                 TCGC CTT GCGC                 ATTCTTTCCTGTAAA  42 450
        ydfG NONE
CYD39_RS07845 1624588 .. 1624598 +  -4.6  -3.41126   CCCCTTTAACGTCGG                 GGTG AGA CGCC                 TTCTCCGCTTTCTCA  52 42
        ydfZ 1624988 .. 1625010 + -17.8  -3.10245   AACCGCTCCGGCCTT           CCCGGTAGCA TAA TGCTACCGGG           TCTCTGTTGCGCTAC 100 58
CYD39_RS07880 NONE
        speG 1632042 .. 1632054 +  -6.2  -2.80575   TGTCGATCATCCACC                CGGC TGACT GCCG                TGTAATCCAGCTTTT  50 220
CYD39_RS07895 1633034 .. 1633046 +  -3.3   -3.6215   TGCCCTCCGGGTCCG                GAGGG TAA CGCTC                TTTGACATGGATTAA  51 49
CYD39_RS07900 1635608 .. 1635623 +  -3.2  -4.56597   CGAAAAAATCTAAGC              CG-CCTG CTC CGGGACG              TTTTTACGCGCCCGG  64 28
CYD39_RS07905 NONE
        dmsB NONE
CYD39_RS07915 1639634 .. 1639651 + -12.7  -2.78349   CAGGTTAATTTATGC             GTGCGGG GCGA CCCGCAC              CTTTCGGGATTGTTT  82 33
        dmsD 1640295 .. 1640312 +  -8.4  -4.42788   TTAATCCCCATAAAA             GGCAGG ATTTTA CCTGCC              TTTTCTCCCATTGCG  84 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV 1644096 .. 1644106 +  -6.8   -4.2349   ACGCAATATTATATC                 GCAC ATA GTGC                 TTTTGCGTCTGACGC  72 87
        clcB 1645855 .. 1645866 +  -2.2   -4.4846   TTATAGGACAGCTAT                GC-GC GAC GCTGC                TTTCTTCTTCGCTTA  62 421
CYD39_RS07965 1649866 .. 1649898 + -11.3  -2.90496   GCCTGAAAAGAAATA      ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC      TGGTTTCACGCCACG  78 35
CYD39_RS07970 1650514 .. 1650532 +  -8.1  -4.57569   AGTCGTAACATGCTG            C-GGCGCG CCCC CGCGCCCG             TTTTTACGGCGCTAA  82 40
CYD39_RS07975 1651598 .. 1651618 + -12.6  -2.62263   GGATTAATGCGGGAA            TCGCTGCC TGACC GGCAGCGA            TCGTCTCAGGCAAAT  81 34
CYD39_RS07995 1653811 .. 1653842 +  -6.4  -3.85698   GGCAAGGGAAGAAAT      CCCCGGGAGCATAG ATAA CGATGTGACCGGGG       TTTCTGAGCGCAGCC  64 82
CYD39_RS08010 1658365 .. 1658376 +  -5.8  -3.30124   TTCTCGCCGGATGGC                GGCA TACC TGCC                 TTATCAGGCCTACAC  56 62
CYD39_RS08015 1660373 .. 1660388 +  -6.8  -3.73224   TCAATACGACGACCA              GC-GCCC CCA GGGCAGC              TTTAATCACGAGTCC  62 389
        rstA 1661303 .. 1661325 +  -9.1  -3.01712   CTTTATCAAGTCATA           GTGGCGATG CTCAT CACCGCCAC           TGTTCAAAAAACAGA  68 64
       ompS2 1662932 .. 1662950 + -17.4  -5.47846   ATTAACTCTTCTCAA             GCCCGCCG TTT CGGCGGGC             TTTTCTTTTTTCATT 100 47
CYD39_RS08040 1664803 .. 1664852 +  -7.2  -3.39353   AGCCTGCTTTTATAA C-CCACCAGCGGCGCTGACGAGAAA TCT TTTC-CGCCAGCGCCGC-GATAGAG TTAATGTGTTGATAT  63 59
        rstB 1666216 .. 1666231 +  -2.6  -3.25102   GAGCGGCGGGAACTG              TGCTAT ACAG ATAGTA               TGTTGTAACTAAAGT  45 60
CYD39_RS08050 1667269 .. 1667293 +  -8.5  -4.07535   GGTATCCTAATGCCA          CGGCTGAGGCT TTG AGCGTCAGCCC          TTCTTTATGCGCCTT  77 108
        manA 1671833 .. 1671854 +   -13  -4.38116   AGACGTAAAACTCCT           CCAGGCGG TTTAAT CCGCCTGG            TTTCATTTTTATGGA 100 83
CYD39_RS08070 1673704 .. 1673715 +  -4.4   -3.9941   GGCCAAACCACGCCC                CCAT CGCA ATGG                 TTTCGTTGTAACAAA  59 343
CYD39_RS08080 1674582 .. 1674592 +  -2.6  -3.54638   AACGTAATGACTCCG                 TTTT TGC AAAA                 TTTCCAGAGCATTAT  48 168
CYD39_RS08085 1675733 .. 1675768 +  -7.6  -3.06133   GAGAAATGCGACATC    TCAGGCAAGACACAGCG TCG CGCGATGTTTTGCC-GA    TTCCATGCCCAGTTC  60 100
         blr 1677312 .. 1677339 +  -6.2   -5.3472   ATATTCCCTTTTTAC        CTGCACCCCTGA CCTC TCACTGGTGCGG         TTTTGTTTATTTTTT  91 231
        ydgT NONE
CYD39_RS08105 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
CYD39_RS08135 NONE
CYD39_RS08140 1684763 .. 1684776 +  -5.3  -3.80114   AAATTCTATCTATCC               GTGAT CAGG ATCAC                TTTGATAACTTCATG  59 192
        dtpA 1686726 .. 1686748 + -13.5  -6.17184   GGAAACAACATTCAG           GCCGCTAAC TGTGC GTTAGCGGC           TTTTTTTTTGCTCGT 100 48
        gstA 1687423 .. 1687452 +  -6.4  -2.93708   AATTAATGTCATGTT       GCCGGATAGC TCGCTGTACC GCCATCCGGC        CTCTTTTTAGCAGCA  55 35
        slyB 1693082 .. 1693106 +  -3.6   -3.5774   CCAACGTGCGTACCA         GCGAT-GGC TGCTCAAT GCCTATCGC          TTTAGCCAATTGAAT  51 321
CYD39_RS08190 NONE
CYD39_RS08195 NONE
CYD39_RS08200 1696658 .. 1696678 +  -5.3   -4.3665   GGACATGTTATCGCC            GCCCACATG GAT CATGAGCGC            TTTATCTTTCACTTC  69 76
CYD39_RS08220 1699059 .. 1699078 +  -6.4  -5.41941   AGACCATCATTGCAA            CGCCTG AGCAGTAA CAGGCG             TTTTTATTTCCTTTA  91 12
CYD39_RS08225 1700238 .. 1700259 +  -7.3  -2.97058   CTGTAATTTCATTGA           TAGCGGC CTCACATC GCCGCTA            TACTTTGAATATCTT  59 35
        gloA 1700710 .. 1700737 + -14.8   -4.2828   GGGTAACTGATCCCC        CGCCGGGCGCAG GTCA CTGCGCCCGTTG         TTTTACTGCATCCCG 100 31
CYD39_RS08235 1701495 .. 1701512 + -11.3  -3.92324   CGATGGCGGTAAAAA             GCGACCT TTAC AGGTCGC              TTTCCTCTTGCACAG  91 68
CYD39_RS08245 1703036 .. 1703064 + -13.3  -4.20868   ACAATTCGCTAATAT        TTTATCCTGTCGT TTA ACGACAGGATAAC        TTCTTCTTTTGCGCC 100 29
        sodB 1703750 .. 1703771 + -14.5  -4.07885   GCATAAGTCTGAGTA           CGCAGAAGG TACG CCTTCTGCG            TTTTAGAGAGGGATA 100 35
        purR 1705313 .. 1705334 +    -5  -3.71672   CCAAATAGTCCAGCA           GCCATGCC AGCGCG GGCGAGGC            TTCGTTTTGCTGCCA  58 105
CYD39_RS08270 1707679 .. 1707698 +   -10  -2.91276   ACGTCGGATAACTGG            CTCACGGA ATTG TCCGTGGG             ATTTCTCACAAAGCC  72 224
CYD39_RS08275 1708924 .. 1708946 + -13.4  -2.82253   TCCTCGCTAATCATC           GCCCCCGCAT TTC ATGCGGGGGA           ATCTTATTTTCCGTT  85 31
        mdtK 1711200 .. 1711219 +   -10  -4.39828   GCGATAATACGACGA            TAGCCGTC GCAT GGCGGCTA             TTTTCTCGACATGTT  87 34
CYD39_RS08290 NONE
CYD39_RS08295 1711922 .. 1711932 +  -6.8  -3.17392   ATAGCCAAGACAAAC                 CGCA ATA TGCG                 TTGGATTACGCACTA  56 441
CYD39_RS08450 NONE
CYD39_RS08455 1737140 .. 1737155 +  -3.2  -2.78438   ATGATATAGTAGAAT              CCCCTT ATTT AACGGG               CTTTACCATGTCGTA  43 181
CYD39_RS08460 1737866 .. 1737877 +  -2.2  -3.32343   GGCGCAACGTGGTCG                CTTC GCTG GAGG                 TTATCACACTATAAG  45 0
CYD39_RS08465 1739454 .. 1739471 +  -7.7   -5.0133   ACGTTGTTCGTATTC             TGGTCTC TGGC GAGGCCA              TTTTTTCGAAGCGTC  91 457
        ttrB NONE
        ttrC NONE
        ttrA 1747033 .. 1747046 +  -2.3  -2.73067   TCATTTGGGGTTACT               TCCGG TTGA CCGCA                TAATCTGTGATTGAA  40 263
CYD39_RS08500 NONE
CYD39_RS08505 NONE
CYD39_RS08510 NONE
CYD39_RS08515 1751663 .. 1751686 +  -2.3  -3.43773   CCGTTGGGCTGAAAC          GCGAGCACA CATTCC TCTGCACGC           TCTTTCGATGTCACC  47 278
CYD39_RS08520 1753257 .. 1753271 +  -8.5  -5.99154   AATTTGTTTAAAAAA               GCGCC CTTCC GGCGC               TTTTTTTATTTAATC 100 58
CYD39_RS08525 1753792 .. 1753810 + -14.6  -5.41143   CCTGCGTAATAAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTCACCCATA 100 46
CYD39_RS08530 1754113 .. 1754131 + -14.6  -5.64274   ACGCACGATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 45
CYD39_RS08570 1762861 .. 1762873 +  -6.2  -3.30124   GTAACATAGCCGGAT                GGCG GCTAA CGCC                TTATCCGGCCTACAC  59 277
        ydiK 1768033 .. 1768059 + -15.8  -3.56862   CAAGCAGTCATAATC         CCGTCGGGCGGC ATT GCCGCCCGATGC         TTTAGCGACGTTTAT 100 28
        rprA 1768442 .. 1768463 +  -9.5  -5.21709   GTCGAAACGGTGTCG           GTGGTGCTA TTTA TAGCATCAC            TTTTTTCATATAAAA 100 147
CYD39_RS08600 1768973 .. 1768983 +  -5.4  -2.62616   CGTTCAGGCGGCATC                 TCTG AGT CAGA                 TAATATGAAAAATCG  50 151
CYD39_RS08605 1770429 .. 1770445 +  -5.1  -3.34239   TCAATGCAATAAACC              TGGCATT TTA AACGCCA              TGTTATGTACATATA  54 255
CYD39_RS08610 NONE
        ydiB NONE
        aroD 1773600 .. 1773610 +    -4  -3.33696   GTTATCTGACATGAA                 TATG TTC CATA                 TTCATTGAAAGCCGC  50 91
CYD39_RS08625 NONE
CYD39_RS08630 1776462 .. 1776511 +  -4.4  -2.64803   AAGGATCGTACCGGA AC-GTCTTATTCGGCCTGACTGCT TTAC GGCA-TCAGGCCGAATAAATCAGA TAAATTTCGCCGTCA  46 39
CYD39_RS08640 NONE
CYD39_RS08645 NONE
CYD39_RS08650 NONE
CYD39_RS08655 1781253 .. 1781266 +  -8.1  -3.68222   GAAACACCGGATAAC               GACGC TACG GCGTC                TTATTCGGCTTGCCC  69 47
CYD39_RS08660 1782966 .. 1782995 + -19.3  -3.08283   CTGCGGTATAAATTG       CCGGATGGCGACG TTAA CGCCGCCATCCGG        TATTACACTACTTCT 100 30
        ppsR 1786548 .. 1786559 +  -4.4  -3.80516   TAACCGCAGGATGTA                CTAG CAAA CTAG                 TTTAATGGGTTGGTT  58 22
        aroH 1787759 .. 1787781 + -15.6  -4.21631   CCGCTTTTAATAGCT           CGCCCATCCT GCC GGGATGGGCG           TTTCTTCGATGCGTT 100 31
        hemP 1788101 .. 1788137 +  -2.9  -2.52676   ACTGTTAACCAAATA   GCGCTCCCGCCAGCAG ACGATG CTGCTGGCATCAG-GC    TAACTTGAACAACTG  40 25
CYD39_RS08760 1803078 .. 1803094 + -15.1  -5.08483   GATAAATAAGTTATA              CGGCGGC AAT GCCGCCG              TTTTATTTAGTTTTG 100 32
CYD39_RS08780 1806451 .. 1806462 +  -5.8  -2.87344   TCGCGCTGACGATAA                CCGT TGAA ACGG                 TCTGTCAGCCAACTG  51 453
        pfkB 1808097 .. 1808112 + -11.8  -3.01791   AAAATCGGTTAACGG              GCGGCG CATC CGCCGC               TGTTAAAAACACAGT  81 71
        ghoS 1808463 .. 1808473 +  -4.6  -3.50466   CCGCCGCGGCGCGTC                 CGCG ATG TGCG                 TTAGTTCGTATTTTT  54 50
CYD39_RS08800 1809416 .. 1809438 + -12.1  -4.81851   TATAGGTACAGCCCA           TGCCGGATA CGGGC TATCCGGCA           TTTTTCAGTTTACAT 100 36
        hxpB 1810834 .. 1810858 +  -4.2  -3.53012   GTCAACGGGCAATTA         GCCGTTGAGCC AGAC GGCA-AGCGGC          TTTGACAGAGACAAA  52 58
CYD39_RS08815 1811630 .. 1811644 +  -2.8  -2.52516   TTGCGCGAACAGAAT               CGCT AAAACAC AGCG               CTTCATAATAAAAAA  40 117
CYD39_RS08820 1813130 .. 1813160 +  -9.8  -5.84381   AAAATGTCTGTCACT       AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG       TTTTTTTCTTAGTCA 100 89
        katE 1816192 .. 1816205 +  -4.5  -2.52543   GTGCTGCGCAAATCC               GACGG CAGA TCGTC                TGCATTCAACACCGT  43 337
        nadE 1822854 .. 1822878 +  -4.3  -2.89929   GCCGATTACGGTATT          CGACGACTTTT GGA AAAAGTAATCG          TACTTCTACTGTTGT  48 4
         cho 1823958 .. 1823971 +  -3.8  -4.36127   TGCGGAAAGTTATTC               TGCC GCAGCA GGCA                TTTTACCTTCTTGCG  64 106
        xthA NONE
CYD39_RS08915 1832700 .. 1832717 +  -4.1  -3.53012   ACATTCACCTGAATA             TCAGGAC GACT GTTCTGG              TTTGCCAGCCCGACC  51 184
CYD39_RS08925 1834403 .. 1834425 +  -7.6  -5.41143   TTATTCGGTCTGACG           GCCTGTCTCC TCA GCAGGCGGGC           TTTTTTTGCCCGCTC  95 70
        sppA 1840101 .. 1840141 +  -8.3  -2.79276   GCTTCATCAATAGCC  ATACCGGATGGCGGC GTCTGCTCATA GCCGCCATCCGATAA  TCATTAATACGTCCT  64 42
        ansA NONE
        pncA 1842360 .. 1842387 +  -3.3  -4.15514   TCGGTATTGTGCCGC        GCCTGCCATAG CATCAC CAGTTGCAGGC         TGTTTTCTTTCTGTT  58 506
        gapA 1844326 .. 1844343 + -11.3  -5.95166   CACAGTCATTGGTAA             GAGCGAC TCAG GTCGCTC              TTTTTTTTGCTTAAA 100 51
CYD39_RS08975 1845557 .. 1845605 +  -3.1  -4.37886   CTATAGGATCTGAAA GGCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACACA TTTTATCCGGCGTCA  62 63
CYD39_RS08995 NONE
CYD39_RS09000 1852582 .. 1852606 + -12.9   -4.1673   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 33
CYD39_RS09010 NONE
CYD39_RS09015 1855609 .. 1855639 +  -2.5  -4.62069   CCTGTTAGCAATACG       CGGCGTTGATG GCAATTTAA TGACAACGCCG       TTTTTCACGTAGAGA  65 327
CYD39_RS09025 1856228 .. 1856249 + -11.5  -5.03715   CGCCCGTCAGATACT           GGCCTGGCG TCTG CCCCAGGCC            TTTTTTAAACATGGT 100 43
CYD39_RS09035 NONE
CYD39_RS09040 1858858 .. 1858870 + -10.5  -3.91716   CCGTAACCAGCCACA                GCGCC CGA GGCGC                TTCTTTCGGCAGTAA  80 148
        yoaK 1859736 .. 1859766 + -14.3  -2.90219   TAAATTCATTTTGAA       TAATAAAGGCTAC CTGTC GTAGCCTTTATTA       TCTCTGAAAGTTCTG  89 115
CYD39_RS09090 1864092 .. 1864117 + -11.1  -3.41693   TATGAAGGGTATAAA         CAAGGGAGGGG GTTA CTCCTCCCCTG          TTCGTTAATAATGCA  80 233
CYD39_RS09125 1869206 .. 1869227 + -15.9  -2.52464   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 43
CYD39_RS09155 1875061 .. 1875078 + -14.1  -4.90296   CAATAACAACAGTAA             GCCGGCG ATGC CGCCGGC              TTTTTATCCCATTTT 100 35
CYD39_RS09160 1875786 .. 1875811 + -14.1  -2.64194   GGCATTATTATTCCA         GCGCTATCGGT TTCG ACTGATAGCGC          CTTATACCGTTTGTA  87 81
CYD39_RS09185 1879404 .. 1879436 + -13.4  -3.05384   ACGATCACCGGCCAA      CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG      TTAAATCCCCAGGCC  86 295
CYD39_RS09205 1881641 .. 1881653 +  -3.4  -3.37344   ACCCATTATTATTAA                GAGT GGTTA ACTC                TTCGTTGAATAAAAA  47 508
        pagD 1882056 .. 1882076 +  -3.9  -4.47707   TCCGGAAATCTTGAT            TGCCATCAA ATA TAGCTGGCA            TTATTTTTCCTGACG  66 83
        cspF 1882453 .. 1882463 +  -2.6   -4.3129   TCAGTGGCGAAAATC                 TAAA GGA TTTA                 TTTTGCTAATGACTC  60 136
CYD39_RS09225 1883470 .. 1883487 +  -4.9  -3.85698   GTAAAAAGGAAATGG             CGATGTTC GTC GAAC-TCG             TTTATGACAAGCGAA  59 214
        msgA 1883749 .. 1883766 + -12.7  -2.89191   ATGTCCGATCGAAAA             CAGCGCC CTGA GGCGCTG              TCTGTGACGATATAA  82 63
CYD39_RS09235 1885063 .. 1885073 +  -2.4  -3.02023   GCACTGCCTGAAGAC                 AGCG AAT CGCC                 ATTTCATTCTCTGAC  42 100
CYD39_RS09240 1885948 .. 1885964 +  -4.4  -3.30441   ACATCACACCACCCC             GGTG-GC TTTA GCTCACC              TTCTGGCCAATGGTC  52 457
CYD39_RS09250 1886458 .. 1886484 +  -3.7  -3.30173   GATTTAAGTGAAAAG        TAG-CCAGCAGG CGCT TCTGCTGGTCCA         TATTCCTCTATTTTT  50 115
        rluE NONE
CYD39_RS09270 NONE
CYD39_RS09275 NONE
        mnmA 1892276 .. 1892325 +  -2.8  -4.93877   GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA  70 34
        hflD NONE
        purB 1894378 .. 1894406 + -12.6   -2.7955   TAAATAATGCGTGCC        TCACCCTCTTTT CTTCA GAAAGAGGGTGA        CTATTTGTCTGGTTT  82 34
        phoP NONE
        phoQ 1896640 .. 1896655 +  -4.7  -2.90723   GAATAAACATTTCTG              TGCGT TCTTCC ACGCA               TCTCGTTAAGCATCC  48 35
CYD39_RS09305 1898162 .. 1898177 +  -4.6  -4.34263   ACAACACCATTGATA              CGTCAG ACTG CCGACG               TTTATATTCTTCCAG  66 355
        potA NONE
        potB NONE
        sifA 1904194 .. 1904207 +  -6.7  -2.77344   TAAAATTCGCGGCTT               CAAGC GGCA GCTTG                CTTCTTCCCGGCTGC  55 207
        potC 1905097 .. 1905113 +    -5  -2.71011   CTCGTGATAAAACCA              AGGGCC GATAA GGCCCG              TAATTCAGGGGACGT  49 15
        potD 1906378 .. 1906390 +  -5.5  -3.26844   TTCAGTTCCACCGTA                TGCGC GCC GTGCA                GTTTTGCTTCATGCA  52 225
CYD39_RS09370 1914968 .. 1914996 + -10.3  -2.85069   ATTGCATAAGCGTCA       GGCCGGGCGTCA TTACTC TG-CGTCCGGCC        TAATCTTTACAAATT  72 32
CYD39_RS09375 1916100 .. 1916121 + -15.9  -5.74684   CTGACCGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTCTTTTTATTG 100 51
        comR 1917331 .. 1917357 +  -7.9  -2.52896   TTCGGATAAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC  59 51
        fhuE 1925997 .. 1926014 + -12.7  -3.44146   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC  93 54
CYD39_RS09505 1939356 .. 1939370 +   -10  -4.13945   CTACAGCAGTAAACG               GCCTAC TCT GTAGGC               TTTTCAAATACCCCT  82 29
CYD39_RS09525 1945505 .. 1945522 + -12.7  -5.96219   AAATGCTGATACAAA             GCCGACC GCCA GGTCGGC              TTTTTTTTATGCCTC 100 44
        flgA NONE
        flgM NONE
        flgN 1957270 .. 1957297 + -10.7  -2.64472   CCTGAATGCCTTGTA        G-GCCTGATAGC ACAGC GCTATCAGGCAC        TGAATTTACGCCGTC  74 74
        mdtH 1962756 .. 1962778 +  -5.4  -2.86492   AAACGCACGCCGCGC           CGGATGCTGG AAC CCGGCGCCTG           ATTTGATACCTGTCG  51 2
        grxB 1963500 .. 1963522 + -10.6   -4.7657   ATCTAACGCCCGCCA           GGCGGCAA CCCTTTC TTGCCGCC           TTTTTCAGCTTTTTC  95 35
CYD39_RS09630 1964183 .. 1964198 + -11.8  -5.47218   CCAATTGATTTCGGA              GGGCGC GCTC GCGCCC               TTTTTTTACGTGCAA 100 33
        pyrC NONE
        dinI 1965671 .. 1965686 + -11.8  -5.63517   CAGTGATGTATGTTT              GCCGGG TCGC CCCGGC               TTTTTTATTTGCGCA 100 52
        bssS 1966212 .. 1966227 + -10.4  -2.73799   GCTCCCCCTCTCTCA              GGCACC GTAA GGTGCC               TCACTTATTTCTGGC  71 49
        solA 1967425 .. 1967443 +  -9.5   -4.1822   TAGCCAATAATTTGT             CGGCCCC GTAAA GGGGCTG             TTTATTAAGGTAAGC  84 31
CYD39_RS09655 1967664 .. 1967674 +  -4.6  -3.28791   TAATGTCAGTTCCTG                 CCGT TGT GCGG                 TTATCAGGGGGAAAT  52 116
CYD39_RS09660 NONE
CYD39_RS09665 1968990 .. 1969029 +  -8.5  -3.13403   AAGTAACGCCTGGCG  AAATGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCAAAA   TATTACTCAGCCGGA  67 35
        lpxL 1971230 .. 1971249 + -12.2  -4.69464   GCGCTATTGACAGGA            TTGCAGCC GTCA GGCTGCAA             TTTTTCCCCTCTTTT 100 31
        mdtG NONE
CYD39_RS09685 1973303 .. 1973321 + -10.3  -4.62783   ATTTCACTATAAAAA             TACCGGC ATCAC GCCGGTA             TTTTTCACCTCACTC  91 279
        mdoC 1978901 .. 1978931 +  -8.2  -4.42464   CCGCCAACCGTACCA       GAACTCGCTGCCAG AAA CGCGTAGCGGGTTC       TTTCTTTAACACCTT  83 86
        csgD NONE
        csgE NONE
        csgF NONE
        csgG 1985819 .. 1985839 +   -14  -5.86976   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTTATTTTGTGA 100 39
CYD39_RS09780 1988918 .. 1988933 +  -4.8  -3.35813   GTTTGTATAAACGCG              CTTTTT TTTA AAAAAG               TTGATTGACGTAGAA  54 15
CYD39_RS09785 1989102 .. 1989121 +   -10  -5.82316   CATATTTAAGAAAGA            GCTCGTAC GAAT GTACGGGC             TTTTTTTTACATAAT 100 39
CYD39_RS09790 1990898 .. 1990913 +    -9  -5.76633   GTCCTGCATAAAGAA              GCTCGT GTAA ACGAGC               TTTTTTTGTATCTGA 100 479
        mtfA 1995891 .. 1995903 +  -5.5   -3.3482   TCCGAACATTAATTC                CTCAC TTT GTGGG                TTAATTAACCAATTG  56 29
CYD39_RS09845 1996071 .. 1996100 + -13.7  -2.73529   AGGAGCCAAATTAAG       GGAAGCAGACGTT CACT GACGTCTGCTTTC        TGCATTTATATCAAC  86 33
CYD39_RS09850 1997622 .. 1997641 +   -10  -3.37344   TGATTGTGCCAATAC            CGAAGCGG CAAG CTGCTTCG             TTAATTCGCTGGAGC  70 130
CYD39_RS09860 NONE
CYD39_RS09865 NONE
CYD39_RS09870 2000947 .. 2000967 +  -6.9  -2.72344   AGATAATATATATGA            GGAAGAATA CTA TATTCCTCC            TCATTGACAATAAGC  55 43
CYD39_RS09890 2006055 .. 2006073 +  -3.2  -4.15088   CATACTCGAAAATAA             TTTTGATA TAT TGTCAAGA             TCTTTTTCTACTTTT  58 139
CYD39_RS09910 2009114 .. 2009126 +  -3.5   -4.2131   AACGCTGGCTTCTTG                TATTT AAA AAATA                TGTTTTTTAATCCGT  60 3
CYD39_RS09915 2009587 .. 2009614 +  -7.1  -2.83012   AAGACATTTAATCTA        ACAGGAGTTAA CTTTTT TTAACTCCTGA         TATCCTCGTAGCATT  58 60
CYD39_RS09920 2010300 .. 2010322 +  -2.1   -3.7175   ATTACCATGAATAGT           TTTCTTATA CTTAC TGTAAGAGA           TTTCAATGACTTTTT  51 68
CYD39_RS09925 2010968 .. 2010979 +  -4.4  -4.58213   AATTACTTAGTAATA                TGGT ATTT ACCA                 TTTTATCCTTCATTA  69 63
CYD39_RS09940 NONE
CYD39_RS09945 2014567 .. 2014579 +  -3.4  -3.62591   CTTCACCTTATTTAA                TTCC CTTCC GGAA                TTTGACACTTATGCC  51 26
CYD39_RS09950 2015297 .. 2015308 +  -4.4  -3.96148   GCTTTTTTCAGAAGA                TGCT TCTC AGCA                 TTTCTCATCGCCAGA  60 195
CYD39_RS09975 NONE
CYD39_RS09980 2019127 .. 2019139 +  -2.7   -5.1971   ATCACAGATTGATAC                CAATG TAA TATTG                TTTTTCATTTTTAAT  76 124
CYD39_RS09985 2020407 .. 2020418 +  -5.8  -2.71791   ATTAAACCAAGCATG                GTCG TTAT CGAC                 ATTTAGAGACAAACT  50 400
CYD39_RS10000 2027277 .. 2027289 +  -4.1  -4.82901   ATTAGATCAAAACTT                CAACG TTT TGTTG                TTTTTGTCAGCAAAC  71 335
CYD39_RS10005 2027516 .. 2027541 +  -3.9  -5.44119   AGAAGTTATCTTTAC         CCGGTTGATCT GATA AGGTTTGCCGG          TTTTTTTGACATCCA  83 90
CYD39_RS10010 2028266 .. 2028292 +  -3.8  -3.72576   AGTCTGCGATCTTTC        GCGTACTGCACT CGACC AGTGC-GT-CGC        TTTCGTCGCGCAAAG  55 152
CYD39_RS10025 NONE
CYD39_RS10030 2034413 .. 2034430 +  -6.9  -3.54424   TTTGAATGGAACGGC             GAGCACC GGCT GGTGCGC              TTTACCGACGTGCGC  62 488
CYD39_RS10050 2036841 .. 2036863 +  -7.1  -3.42078   TTGTCTACCATAACT           TATCATTGC CCCGA GCAATGGTA           TTGTAGTCGCGTATA  63 345
CYD39_RS10075 2039687 .. 2039714 +  -9.8  -5.00884   AAGAAGTTATCTTTA        CCCGGTTGACCT GATA AGGTTTGCCGGG         TTTTTTGACACCCAT  93 89
CYD39_RS10080 2040381 .. 2040404 +  -4.4  -3.03243   ATCAGAATCGGCACC          GCCAGCAGGGC AAT GACCAGC-GGC          TGTTGCAGAATGGCT  49 315
CYD39_RS10115 2047573 .. 2047588 +  -8.2  -4.58283   TATAAGATCTAAAAA              GGCGGC CGAA GCTGCC               TTTTTAGAACCGTTG  82 133
CYD39_RS10145 2053897 .. 2053910 +  -3.7  -2.70932   CCGGCATTCCGGAAC               GGCGC TCCA GCACC                TCATTAACCCGCGAA  43 222
        pduA NONE
        pduB NONE
        pduC NONE
        pduD 2077846 .. 2077856 +  -8.2  -3.73224   AAACCCGCAGGAACT                 GCGC GTG GCGC                 TTTGATAAAGGATAA  71 10
        pduE NONE
        pduG NONE
        pduH NONE
        pduJ NONE
        pduK NONE
CYD39_RS10310 2081991 .. 2082017 +  -2.1  -2.57463   CCGGCTGGTAGGCCC         GCGATGAACGG CGAAA CCCTGCAGCGC         ATTGTCGAGGAGATT  39 19
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
        pduQ NONE
        pduS NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX 2091319 .. 2091335 +    -3  -4.30576   GATGTAGTCATCAAC             GCGATCT TCAT AG-TCGC              TTTTCATGCTGGCGA  62 170
        sopA 2101503 .. 2101522 + -12.2  -2.91264   CCCGCATGGAATTAA            GGGACACA GCGT TGTGTCCC             TCTGTAAATAGACCC  80 52
        sbcB 2103362 .. 2103380 +   -16   -4.4261   ATGACAGACAAAAAA             CCGGAGGC ACT GCCTCCGG             TTTTACTATTGCCGA 100 115
CYD39_RS10440 2107114 .. 2107140 + -22.4  -5.75342   TGAACGCATGAGAAA         GCCCCCGGAAGA TCA TCTTCCGGGGGC         TTTTTTTTGGCGCGC 100 66
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 2111639 .. 2111653 +    -5  -2.71011   TCGAAAGGAGTGCTG               TGATGA ACG TCGTCA               TCCTTGACACCGGCT  49 23
        hisH NONE
CYD39_RS10470 NONE
        hisF NONE
CYD39_RS10480 2114343 .. 2114357 + -12.8  -5.14563   ATAAGCGTAAAAAAA               CCGGGC AAT GCCCGG               TTTTTTAATGAGAAA 100 37
CYD39_RS10685 2162518 .. 2162556 +  -7.4  -3.34398   CGGCCTGCTTACCTG  GCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCACTCC  TCTTTGGCCAAAAAC  63 58
CYD39_RS10705 2169341 .. 2169358 +  -4.8  -4.07687   CTGCTCAATATCCGG             C-GGCGC GGCGA GCGCCAG             TTTTCCCGCCAGCGT  62 266
        yegD 2171600 .. 2171619 + -11.4  -3.71649   CCTTTCCTTATTTTG            GCCCCTTC CTCG GGAGGGGC             TTTCCCGTTTCAGCG  91 202
        mdtA 2173101 .. 2173111 +  -6.8  -3.08679   AAAAAGGAGCGCGCG                 CCTG ATG CAGG                 TATTACCTCCGGGCA  58 21
        mdtB 2176222 .. 2176233 +  -3.6  -4.66264   CGCCATAAAGAGGAG                GCGT AGAT GCGC                 TTTTTCGCCCTTTTC  66 20
        mdtC NONE
CYD39_RS10740 NONE
        baeS NONE
        baeR 2182866 .. 2182876 +  -5.4  -3.63744   ATAACAATAACAAGG                 TCGT AAG ACGA                 TATTTTCCGCCAACG  59 52
CYD39_RS10755 NONE
CYD39_RS10760 NONE
CYD39_RS10765 NONE
CYD39_RS10770 2188366 .. 2188376 +  -2.6  -3.50047   ATCAGACTCTCCAAT                 TTTA TTA TAAA                 TTATCAATTTGTAAG  47 519
CYD39_RS10840 2197374 .. 2197399 + -13.4  -4.65666   GGAACCACCTCCTTG         GCCTGCGTAA TCTCCC TTACGCAGGC          TTATTTTTTGCGTAT 100 162
CYD39_RS10845 2198418 .. 2198434 +  -4.3   -2.5806   TGTGTTTGCTCATTT              ATGGCCA GGC TGGCCGG              GTTCTGACGCCATTT  46 524
        yegS 2200231 .. 2200252 + -11.6  -4.78572   TAACACCAGTCGCTG           GCCGGATG CGCTCA CATCCGGC            TTTTCTTCGTTGAAC 100 41
CYD39_RS10870 NONE
CYD39_RS10875 NONE
CYD39_RS10880 2204843 .. 2204892 +  -8.6  -3.62864   ATGCTGTATTCAATA G-GCCGCTGCTGCTGATCGAGCG CCACC TGCTTAATCACCAGCACCGGCAC TTTACCATCCATTTG  68 60
        rcnB 2208055 .. 2208086 + -12.4   -2.6175   GCAGAAAAATTGTCA      TCCCGGTCACTTAT TATT GTAAGTGACCGGAA       GTTCATTCACCTATC  81 208
        metG 2217082 .. 2217099 + -12.7  -5.03145   TGAAATAAGCAACAA             GCCGGAG CATG CTCCGGC              TTTTTTAACCGCTTA 100 33
CYD39_RS10940 2217817 .. 2217836 + -11.4  -5.01553   GGTAAAGTCGCTCAG            GGCGCTGC TTCG GCAGCGTC             TTTTCTTTATGAATT 100 69
CYD39_RS10945 2218769 .. 2218784 +    -4  -3.37685   ACGTTCCGCCGTCAA              TGCAGGC GCC GCCT-CA              TCTTTGCCGCGTTTT  49 319
        mlrA NONE
CYD39_RS10970 2222719 .. 2222732 +  -2.4  -2.50016   CCACCGTTGAAGCGA               TGGT CGCCGT ACCA                ATATTGATAATCACC  38 176
CYD39_RS11000 2230871 .. 2230887 +  -6.5   -5.2197   GCGCTGGCGCTGGCT              GCCGC CATTTGC GCGGC              TTTTTGCTTTTTATA  91 127
CYD39_RS11015 2233260 .. 2233303 +  -5.8  -4.46233   GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCACCCGGCG TTTATTTGGCGTTGA  72 29
        yohP 2235972 .. 2236008 + -10.8  -3.30771   GATGATTTTCTGATT    CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG    TTCTGGACGCTGTAG  80 28
CYD39_RS11065 2243178 .. 2243188 +  -2.6  -3.55447   GATCGGTAGCACGTT                 TTAA CGT TTAA                 TTGTATGATGAATCC  48 110
CYD39_RS11070 NONE
CYD39_RS11075 2244428 .. 2244440 +  -7.7  -3.22106   TAAGACATAGCAGGC                CCGTA AAC TACGG                TTCCATTACATTGTT  64 138
         cdd 2245372 .. 2245385 +  -8.1  -3.30243   AATGTGCCGGATAGC               GACGC ACTG GCGTC                TTATCCGGCCTGACT  65 44
        sanA NONE
CYD39_RS11090 2246646 .. 2246658 +  -2.6  -3.70505   TTTAGATCATTAAAA                CGCG TTATT TGCG                TTTCGCCTTAATTTA  50 180
CYD39_RS11095 NONE
        preA 2249181 .. 2249207 +   -13  -3.54475   GCTCGCGGTATGAAG        CCCGGCGC-GC AGTTTC GCTGCGCCGGG         TTATCTGATAAGCAA 100 40
        fghA 2257612 .. 2257624 +  -9.1  -2.74012   ACATAATGAATTTTC                CAGCG CCG CGCTG                TAATTCACCTCCTCC  66 35
        serB 2260435 .. 2260446 +    -3  -2.59431   CGAATTGCTTCTTTT                TCTT ATTG AAGA                 TGAATTATAACGCGA  40 4
CYD39_RS11155 2261816 .. 2261848 + -19.2  -2.98823   ATCGGTTATAACATT      CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG      TCTCTGTCAGAAACG 100 30
CYD39_RS11175 2267911 .. 2267923 +  -4.1  -3.21218   TCACGCCTGTTAACC                CGTTA TCA TAGCG                TTCGTAATGAACCGT  48 52
CYD39_RS11180 2268839 .. 2268876 + -12.9   -3.6944   TCAATGTTCTTCAGG   CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG    TGTTTCTCTTACGCC 100 44
        setB 2274482 .. 2274502 +  -2.6  -4.83615   AATGATAGCTTTGCA            TATGTTTC CGTTT GTAACATA            TTTTTATGCACGCTA  72 298
        yeiP 2276611 .. 2276643 +    -4  -5.10665   GATTAAGTTTCGCAT     TTTTC-GGCTGCGCC CCAG GGCGCAGCCTGACCC      TTTTCTTTATTGACT  76 35
CYD39_RS11225 NONE
CYD39_RS11230 2278564 .. 2278599 + -13.6  -4.02456   TCCATGTAATTAACA    TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA    TTTATGATGATATTT 100 41
        mepS 2279586 .. 2279603 + -11.3  -4.59414   GAGACGGCATAAAAA             GCACTGC TTCG GCAGTGC              TTTTGCTTATTATCC 100 77
CYD39_RS11240 2281446 .. 2281458 +  -3.3  -2.96444   TAACGGATTCACATC                AGACG CAA CGTCA                CTTATTATTCAGCGA  44 55
CYD39_RS11245 NONE
CYD39_RS11250 NONE
CYD39_RS11255 NONE
        yejF 2287285 .. 2287298 +  -4.5  -4.09864   CCACCAGACTATTCT               CGGTGC TCT GC-CCG               TTTTGCGGAATCGGT  62 262
CYD39_RS11280 2291688 .. 2291717 +  -4.9  -3.61517   GCAAAGCAGATCACT       TACCTGTTGCTGG GTCG CCTGTAGCAGGAA        TTATTAAAGAGAGAT  57 101
        rplY 2292044 .. 2292059 + -11.8  -5.68039   GAAGTTGAAGAAAAA              CCCCGC CCCG GCGGGG               TTTTTTTATGCGTTT 100 48
CYD39_RS11300 NONE
        pbgA NONE
CYD39_RS11310 2296151 .. 2296168 +  -9.1  -5.64274   AATTCCCCTTAAAAA             CCAGCCT CTCA GGGCTGG              TTTTTTTATGCCTGC 100 42
CYD39_RS11315 2296487 .. 2296499 +  -3.3  -3.03309   ATGATTACTCCTTCA                GCCAG CAA CTCGC                TAATTGTTATTCAAC  45 181
        narP 2298841 .. 2298856 +  -6.1  -4.62069   CGCCTCCGCGTAGCC              CAGCG CCGCAT CGCTG               TTTTTCGGGTCCAGA  75 321
         eco 2312224 .. 2312234 +  -8.2  -5.49809   CCAGCGCCAGCAGCA                 GCGC AAT GCGC                 TTTTTTTGCCCTTTC 100 500
        rcsD NONE
        rcsB 2321909 .. 2321937 +  -6.6  -5.24129   GACTCATCTTTTGCA       GGCCGGACAGGCG ACGC CGCCA-TCCGGCA        TTTTTTATGCCCGCG  87 94
CYD39_RS11470 NONE
CYD39_RS11475 2332319 .. 2332329 +    -4  -6.24157   GAAATCAGCATTCGA                 TCAA ATT TTGA                 TTTTTTTTTATGAAT 100 105
        nrdA 2334885 .. 2334902 +  -3.4  -2.71144   GTAAGATCTGATGAA             TAGTGC CGGGTA GCGCTA              TGCTTACCCGGCCTA  43 30
CYD39_RS11485 NONE
        yfaE 2336840 .. 2336851 +  -5.8  -3.06183   ACAGCAGGAAATTAC                TGGC CGCC GCCA                 TTAAATCCAGCTCAC  52 488
CYD39_RS11500 2338667 .. 2338703 +  -9.4  -2.54523   TGGCAAACGTTGCGC   CAGGCCGGATGA-GGCG TTTA TGCCCTCATCCGGCGCG    TCACTTCGACTATGG  68 83
        glpA NONE
        glpB NONE
        glpC 2345815 .. 2345830 +  -5.4  -3.88498   TGAATAATAAGAAAA              TCAGGT CTAT GCCTGA               TTTAATATATCCCCC  63 344
        sseL 2347230 .. 2347241 +  -5.8  -4.88067   CGCGTAAGGCATACG                TGCC ATCC GGCA                 TTTTTCTCAATAACT  83 310
        nudI 2354235 .. 2354254 +  -9.3  -3.76413   GGTTATTATAATGAC            GACAGCC GCTTCA GGCTGTC             TTTACGCTTTTAACA  77 30
        arnB NONE
        arnC NONE
        arnA NONE
CYD39_RS11595 NONE
        arnT NONE
        arnE NONE
        arnF 2362921 .. 2362944 +  -2.3  -4.78149   CACTGCTGGAGCGCA          CGGCGAGAT ATTTTA ATCCCTCCG           TTTTTCAGTTCTGAC  68 415
         rbn NONE
CYD39_RS11665 2372854 .. 2372892 +   -11  -3.14132   GCAAAAGCGCCTGAC   GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC   TTAGTGAGACAAGCC  78 27
CYD39_RS11755 2404611 .. 2404634 +   -14  -3.21062   ATCAATAATCTTAAA          TTCAGGCTAC TTCG GTAGCCTGAA           TTGCATCTTCATCTC  93 33
CYD39_RS11760 2405345 .. 2405372 + -10.6   -4.2828   ACCGTTCTTCCCGTA        GGCCTGATAAGCG CAG CGCC-ATCAGGCC        TTTTCCTGCCTGGGG  88 74
CYD39_RS11790 2410539 .. 2410566 + -16.4  -4.37886   CTGACTGCCTGATTT        CA-CACCGCCAGC CTC GCTGGCGGTGCTG        TTTTGTAACCCGTCC 100 29
CYD39_RS11795 2412859 .. 2412885 +    -3  -5.28481   CATCGCCATCCGGCA         TTCTGCTATTTA CCC TACAAAGCGGAA         TTTTTTGCTTAACTG  76 128
        yfcC 2414735 .. 2414751 +  -5.7  -5.03715   GCTGTGGTTTTCACA              CGTGACG ATA CGCCGCG              TTTTTTCCGCGTAGT  84 266
CYD39_RS11830 2419827 .. 2419841 +  -4.2  -4.66833   TCTTCCGGTTTCTCC               TGGAGC GCG GCTTCG               TTTTTGGCGTTGCGG  71 56
        yfcG 2422559 .. 2422575 +  -5.1   -2.6381   TAGGGAAGAGGAAAT              CCTCC CTACTCT GGAGG              TCATATGCAGATTCT  48 130
CYD39_RS11855 2423494 .. 2423519 +  -8.9  -4.54026   AAAGCGCCGTATCCT         GCCCGGTAAGCG ATG CGCC-GCCGGGC         TTCTTTTATTTCAGC  88 46
CYD39_RS11910 2435697 .. 2435733 +  -4.3  -3.48474   TGCGTAATTGACATC    GGCCAGCGGCATTGC GCCGCTG GCAAAGCCATTAGCC    TTCGTTATGCATTTC  54 30
CYD39_RS11960 2446155 .. 2446176 + -14.5  -3.54424   CGCCCAGCGCCGTAC           CGCGTACCT GTGC AGGTACGCG            TTTCACAACCTCCAC  95 192
CYD39_RS11985 2448848 .. 2448867 +  -6.4  -3.68569   ACCGGAGAGGTTAAA            GCGCCT CTTGCATC AGGCGC             TTATTCCGTCGCTGA  62 71
        mnmC 2453100 .. 2453133 + -10.4  -2.92668   GCTTTGACTAACGCC    TGATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATCG     CTTTCTCCAGACTTT  68 129
        smrB 2458331 .. 2458342 +  -7.2  -3.30124   GAATTGCCGGATGGC                GGCG CAAG CGCC                 TTATCCAGCCTACGA  63 45
        fadL 2464727 .. 2464745 + -10.3  -5.33405   GAAACGGATCAAAAA             GGTGAGC ATTGC GCTCACC             TTTTTATTTACTGCC 100 50
CYD39_RS12070 NONE
CYD39_RS12075 2467300 .. 2467331 +  -8.9  -3.55761   CACGGAAGGTAAGTT      TGCGCATG-TAGTG TTCGT CATTATCATGCGCA      TTTACCCAGTCGCTG  68 427
        pgtP 2474548 .. 2474566 +   -16  -3.11072   TCCCGGGGAACAGAA             GCGCCGAC ATT GTCGGCGC             TATCTATTCGCTGAC 100 52
        lpxP 2476449 .. 2476460 +  -7.2  -5.10163   TCTACATCTGAAAAA                GGCC GCAA GGCC                 TTTTATTTTGGCATT  86 30
        ypdK 2476939 .. 2476958 + -13.6  -4.28487   CAATGCAAAGAAAAA            CAGGAGCC ATGG GGCTCCTG             TTTGCTTTTCTACTC 100 43
CYD39_RS12130 2481571 .. 2481626 +  -9.1  -3.61398   AGTTCCAGCTCGCGA TGTC-GTTATACCGCTGGGCCGCGCCG TGAA TGGCGCGCTCTA-CGGTATAGCCGTCA TTGTTGAGCAGCAGG  68 263
        mgrA 2484172 .. 2484195 +  -2.4  -2.83273   GACGCTATTCTGGAG          GGGCGGTTTT AGCA AAAAATGCTC           TCCTTCATGATTTAA  40 14
CYD39_RS12145 2484637 .. 2484672 +  -7.7  -3.74227   AAGCCTCCTGCTGAA   TAACA-GCCCGATGACG CCCA CG-CATCGGGCCTGCTA    TCTTTCTGTCTTTAT  71 39
        nupC 2487491 .. 2487508 + -12.7  -5.61596   CGTTTAATGTAGAAA             CCGGGGA GCTA TCCCCGG              TTTTTTTATGCCGCT 100 46
CYD39_RS12175 NONE
CYD39_RS12180 2491082 .. 2491110 + -13.3  -3.82946   CGGACTAACAAATAA        TAAACGGCAGG CGTCTGC CCTGCCGTTTA        TTCTGTTTCAGCTGG 100 33
CYD39_RS12190 NONE
CYD39_RS12195 NONE
CYD39_RS12200 NONE
CYD39_RS12205 2493206 .. 2493220 +  -8.5  -5.24989   CACCAATGTAAAAAA               GCGCC CTAAA GGCGC               TTTTTTGCTATCTGC  95 36
CYD39_RS12230 2497860 .. 2497874 +  -4.9  -3.37522   GATACAGCGGATCTT               TCGCC CTCGC GGCGG               TTAATTCGCTGGCCT  54 110
CYD39_RS12240 2500083 .. 2500097 +  -7.1  -3.18383   TCAGGCATCCAGTAA               GCGGA TCATT TCCGC               TTCATCAATCACGGT  62 257
        cysZ 2504151 .. 2504176 +  -9.1  -3.10715   GTAAAAATGTATAAA         TAAGAGATGGC TTAT GCTGTCTCTTA          TTCCATACTGATAAC  68 42
        cysK 2505298 .. 2505313 +  -6.8  -5.26316   AAAACGCGTAAAAAA              GCACCT TTTT GGGTGC               TTTTTTGTGGCCTGC  87 54
        ptsH 2505899 .. 2505926 +    -2  -4.11692   GTCAAACTGATGGCG        GAACTCGAGTAAG TTT TTTTC-CGGGTTC        TTTTAAAAATCAGTC  55 14
        ptsI NONE
CYD39_RS12280 2508256 .. 2508273 + -12.7  -5.83822   TGCCGCAGTGAAGAA             TGGCGCC TTTG GGCGCCA              TTTTTTTTGCCTGTA 100 45
        ptsJ NONE
CYD39_RS12300 NONE
CYD39_RS12305 NONE
CYD39_RS12310 2512652 .. 2512666 +  -5.6  -3.28712   GCACATAGAAAATCG               GCAGGA TAT TCCCGC               TTGTCAAAGGCGGCC  56 89
        amiA NONE
        hemF NONE
CYD39_RS12375 2523535 .. 2523552 +  -2.7  -3.45945   TTGAATAAAAGCAGG             CTCGT AGAAATAA ACGAG              TTCATTGTAGATAAA  48 37
CYD39_RS12380 2524995 .. 2525008 +  -9.5  -3.30124   CGGTTCCCCGGAGGC               GGCGC TGGC GCGCC                TTGTCCGGGCTACCA  74 91
         tal NONE
         tkt 2545879 .. 2545919 + -14.2  -3.40371   CGTTAGCAACACAGA  CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA  TTACTTCGTAGACTC 100 47
CYD39_RS12500 2549553 .. 2549565 +  -5.5  -3.53012   TCTCTGTAGGCGTTA                TTGGC GCA GCCAG                TTTGGACACGGACAG  57 55
        narQ 2553841 .. 2553854 +  -3.7  -3.57561   GCAAATCGCCGGAAG               GCCAG ATGT CAGGC                TTTCCGGCGTTGGCA  53 47
        acrD 2557158 .. 2557178 +    -9  -4.78237   GTCGGGCACAAAAAA            GGCGACTT TCGTT GAGTCGCC            TTTTCTTATCCCCTA  90 66
CYD39_RS12525 NONE
        dapE NONE
CYD39_RS12535 2559419 .. 2559440 +  -5.8  -2.90075   TAACTGGATAACATG           CCGGACAG GTATCG CTATCCGG            TATGGTTCCCACCGC  51 38
CYD39_RS12565 NONE
CYD39_RS12570 2566731 .. 2566742 +  -7.2  -3.02144   TCGCCACTCTGGCGA                CGCC AATC GGCG                 TCTTGCCGCAAATAC  57 290
CYD39_RS12595 NONE
        arsC 2573604 .. 2573619 + -11.8  -3.12668   CGGTTAACCGTTGAA              CGCCGC CGTC GCGGCG               TATTACAGTTTCAGG  81 34
CYD39_RS12620 NONE
        purM NONE
        purN 2578539 .. 2578570 +  -4.4  -2.96152   AGGACTGCGTCTGCT      TGCCGGAT-GGCG GCATAAA TGCCTATCCGGCC      TACTCTTTTCCCTTC  48 54
        ppk1 NONE
         ppx 2582319 .. 2582345 +   -18  -3.78022   CCGCGTAAATTGTGG         GCCAGACGCCGC GCC GCGGCGTCTGCC         TTTACTGAATCTCAG 100 33
CYD39_RS12655 2585429 .. 2585449 +    -4  -2.89564   GGCACTGACGTACGG            TACTCTCA AACTG TGTGAGTA            TCTCTGCGATAGCCG  46 290
CYD39_RS12665 2586642 .. 2586661 +  -9.3   -3.2352   GCACATAAATAAAAA            CCCTCTG CAAAAA CAGAGGG             TTAAATTCACTTTTA  70 488
        xseA 2594754 .. 2594776 + -12.7  -4.57474   TCATTCGCCTCAAAA          CCGGGCAGGG AATA CCC-GCCCGG           TTTTGTCTAACTTAC 100 153
        sseA 2633864 .. 2633876 +  -3.3   -2.5547   GCGCGTACCGATTTA                CCGGT TGA ACCCG                CTTAATATCCGCCAT  42 8
CYD39_RS12805 2634896 .. 2634911 + -10.4  -5.67967   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 126
        suhB 2645379 .. 2645404 + -16.9  -2.74784   AGCGCTAAGTCTCTT         CGGCGGATGGG GCCA CTCATCCGCCG          TGCCTTTTCAGGCGT 100 33
CYD39_RS12870 2646392 .. 2646404 +  -5.5  -3.03028   GCGCTATCCGCTAAA                TAGCG CGA CGCTG                TATATATGCATATTT  52 23
        asrA NONE
        asrB NONE
CYD39_RS12885 2649915 .. 2649938 +  -2.4  -4.82901   AAGCGATAAAGACAG          GTTTACGTAGC AGC GC-GCGTAACC          TTTTTATGGCCCGCC  68 475
        csiE 2652486 .. 2652496 +  -2.4  -3.53012   TCCTGGAATCATGAC                 GCGG CAA CCAC                 TTTGGGCCGAAGGAA  47 27
        hmpA 2656606 .. 2656633 +  -6.9   -4.2679   AATCCTCTGAAAAAA        CGGGCGTTATC GTTAAG GCGAACGCCCG         TTTTCCTCCCCGTTC  72 49
CYD39_RS12920 2658377 .. 2658412 + -12.8  -3.13403   ATTTTGTGAAAAACA    TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA     TATTCATCGCAAAGA  86 97
        cadB 2660047 .. 2660061 +  -2.7  -3.53012   ACCTGCTATAGCGTA               GCGGG AGGGG CCCAC               TTTACCAGGAACAAG  48 75
CYD39_RS12930 2662233 .. 2662254 + -14.5  -5.00616   GAAATAAGTACCAAA           GGGAAGTGG CTTG CCACTTCCC            TTTTTTCACGCAGCA 100 34
CYD39_RS12935 2663796 .. 2663806 +  -2.4  -3.62597   TCGGCACATCAGATA                 GCCG CGT CGTC                 TTCTTCGCCAGTACG  49 81
CYD39_RS12965 NONE
        mltF 2674297 .. 2674309 + -10.5  -4.65895   ACATCAATTAGCGAT                CCGGC CGC GCCGG                TTTTTGCATCGCGCG  95 251
CYD39_RS12995 2678590 .. 2678616 +  -2.2  -3.61178   CTTCCGCCTCATGCA         GAAGAGCCATCA AGT TTATTGCGCTTC         TTTAGCGTGAATCAA  49 49
CYD39_RS13010 NONE
CYD39_RS13015 2682303 .. 2682314 +  -3.6  -4.10161   CGCCTCGCCCCACAG                CCGC AAAC GTGG                 TTTTCCCAGCTCATC  60 248
        nadB 2693999 .. 2694029 +  -7.4  -3.21099   TGTAACGCGCCTGCT       CCCGCTGCGGCGTG GCG CATTCCACACCGGG       TTCGTAATAAGGCGG  59 336
        srmB 2695882 .. 2695903 + -14.5  -5.80817   GAAGAGTGATGATAA           TGCCGGGTT CGTT AACCCGGCA            TTTTTTTATCTTCCA 100 32
        eamB 2697499 .. 2697523 + -14.3  -3.94877   ACAAATAAAACAAAA          GCGGAAAAGGC CCG GCCTCTTCCGC          TTGTTATTACCGGAT 100 42
CYD39_RS13115 2698970 .. 2698983 +  -9.5  -3.48276   TATCGCCCGGATAAC               GGCGC GAAA GCGCC                TTGTCTGACCGGGCG  75 60
        trxC 2700718 .. 2700738 + -14.7  -4.16943   GCGCTGTAAACGCCA            CGGGGCGCA TCT TGTGCCCCG            TTTTCACCTCTGCCA 100 32
CYD39_RS13130 NONE
         pat 2704209 .. 2704233 +  -2.1  -2.74269   TGTTGACCACTTTAA          CGGGTACTGAT GTT ATTATTGCTCG          CTTATGTCGTCTGCA  40 56
        pssA 2705655 .. 2705671 +  -9.4  -4.66938   ATCCTGTAATCGAAG              CCCCGT CCTGT ACGGGG              TTTTCTCTTAGGAGT  91 32
CYD39_RS13145 2706212 .. 2706225 +  -3.8  -2.74144   GGCGCGAACCTGCGC               CGGA AACATC TCCG                CTTTCAGGATCCCGC  43 223
        bamD 2719228 .. 2719247 +   -15   -5.8187   TACCAACAAGCAAAA            CGGCAGCC TTCC GGCTGCCG             TTTTTTTATTCGGTA 100 46
        raiA 2719843 .. 2719858 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGG 100 51
CYD39_RS13205 2720017 .. 2720037 +   -14   -5.5112   GAAGACGAACAAGAA            GGCCTCCC CCACC GGGAGGCC            TTTTTTATTGATAAC 100 49
        pheA 2721398 .. 2721414 + -12.3   -3.0497   CCATCGTCGGACAAC              GTACCGG CAA CCGGTAC              TCTTCCAGCTGCTCT  76 195
CYD39_RS13230 NONE
        dgcN 2726621 .. 2726643 +  -6.8  -4.30995   CAAACCCATAAAAAA           GGGGCCAGCG TAA TGCCAGCCCC           TTCTTTTCTACAAGC  74 119
CYD39_RS13265 NONE
CYD39_RS13270 2732583 .. 2732600 + -11.3    -5.252   GCGGAGTAACACAAT             GGCGAAC TCCG GTTCGCC              TTTTTTATCGCCGTC 100 32
CYD39_RS13275 2733755 .. 2733797 +  -2.7  -5.14563   AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG  79 478
        nadK 2734947 .. 2734975 +  -3.3  -3.92178   TTACGTTAGCCTCTT        TACTGTATAAA AAACCAG TTTATACTGTA        TTTAATTACAGTCAT  55 43
        recN NONE
        bamE 2737419 .. 2737436 +  -6.3  -4.07687   AACCCGATCGCCATC             CTGCACCG TAT CGGTG-AG             TTTTACCGGACGACT  67 281
        smpB 2738731 .. 2738759 + -13.3  -2.53613   AATAGACATTTTTTG        TGACCAGCTTC TCAGTAT GAAGCTGGTCA        ATATTCATATCTCAT  84 39
        bapA 2750785 .. 2750802 +  -2.5  -3.14132   TCTGTTGCAGAACAA             CCACCTG ATAA CCGGCGG              TTGATAAAAAAGCCC  45 4
CYD39_RS13320 NONE
CYD39_RS13325 NONE
CYD39_RS13330 NONE
        ssrA 2756073 .. 2756096 + -13.2  -5.34309   CACCAAATAAAACAA          GGGGTTACGT GAAA ACGTAGCCCC           TTTTTCTTTGGTAGT 100 36
CYD39_RS13385 NONE
CYD39_RS13390 2765106 .. 2765132 +  -8.7  -2.77962   CAATAACGACTACTG         GCTGACTGGCT TATCC GGCCAGTCAGG         GTTTGAGGTATCCAC  64 35
CYD39_RS13480 NONE
CYD39_RS13485 2778715 .. 2778725 +    -4  -3.96506   AAACTCATCAAGATC                 GAAT ATT ATTC                 TTCTATTTTGCACTA  58 171
CYD39_RS13505 2781596 .. 2781618 +  -4.9   -3.0375   AACCCTTCAATCTAA          GGCGCCTTAGT ACC ACT--GGCGCC          ATTTATCATCTTCCT  51 39
CYD39_RS13540 2786461 .. 2786471 +  -2.4  -4.19746   GCTGATCACGTCACG                 GCGC CCG GCGG                 TTGTTTTCACATCGC  56 259
CYD39_RS13555 NONE
CYD39_RS13560 NONE
CYD39_RS13565 2790298 .. 2790323 + -10.5  -5.49234   ATGAACCTTAAAAAA         GCCTGTAACTT CAAC GAGTTGCAGGC          TTTTTTGTTGCATGT 100 222
CYD39_RS13570 NONE
CYD39_RS13580 2793566 .. 2793589 + -12.4  -5.27206   CAGCAAATAAAACAA          GGGGCAACGT GAAT ACGTAGCCCC           TTTTTGTTGTCTATG 100 367
CYD39_RS13585 NONE
CYD39_RS13590 2794049 .. 2794063 +  -3.6  -3.51032   TTTTTCAAATGATAT               TGGTAA TTA TTATCA               TTCTCATTAACGACT  50 65
CYD39_RS13595 2795250 .. 2795281 +  -2.3  -2.97021   GCAGCGCAATGACAA      TATGGCGGCTGAAC CCAGC GTGT-GTCGCCATA      TCTCATCTTTCACCG  41 46
CYD39_RS13600 2799005 .. 2799027 + -13.5  -3.77831   AAAGAAAGCCCGCAA           GCGGCTGTT CCTGT AACAGCCGC           TTTAGCTATTGATAC 100 64
CYD39_RS13605 NONE
CYD39_RS13610 2801547 .. 2801562 +  -3.2  -4.87291   CTTCACTACGCGACT              CCGC ATGTGTTC GCGG               TTTTTGCTTGCCGTA  74 285
CYD39_RS13620 2804459 .. 2804486 +    -7  -3.99494   ACTGTAAATAATTTA        CTCTCAGCTACT ATTC AGTAGCAGATAG         TTATTCTTACATTGC  68 403
CYD39_RS13635 2807053 .. 2807076 +  -3.2  -3.40558   ATACGCGGATGTGCA          GATCCTGCT ACCGTTC AGC-GGATC          TCTTTGAAATCTGTA  48 50
CYD39_RS13640 NONE
CYD39_RS13645 2808226 .. 2808256 + -11.2  -4.75372   TTTGCTAAAAAAAAG       CCTGGACGTAAATA TGT TTTTTACGCCCAGG       TTTTTCATAAGTCCT 100 33
CYD39_RS13665 NONE
CYD39_RS13670 NONE
CYD39_RS13675 2815308 .. 2815338 +  -2.5   -2.6462   CGGCCTACGCGCTCA      TG-TGCCAGGCCGGG CAA CCCCGCCAG-CATCA      CTCTTTCCATAACTC  40 69
        csiD NONE
        lhgO NONE
        gabD NONE
        gabT 2820632 .. 2820643 +  -2.2  -3.30124   GCAGCGTCGGGTGGC                GACG TAAC TGTC                 TTATCCGGCCTACAA  45 51
        gabP 2822139 .. 2822160 + -10.1  -2.57931   AAACCTACGTTAGTT           ATTCCCGGC GTCA GCCGGGAAG            CTTCTCAGGAGTAAA  70 28
        csiR 2823203 .. 2823214 +  -7.2  -4.93288   TCACTTTGTCAGCGT                CGGG TATT CCCG                 TTTTATTTAAATGTT  91 373
CYD39_RS13725 NONE
CYD39_RS13730 NONE
CYD39_RS13735 2824878 .. 2824929 +  -4.3  -3.09135   TTATCAGAATGAGCA TGGCGCAACGTTCCCTGAGTC CCGGTTAATA GAGACAGGAAACGCAGCGCCA TCTGTTAAAGGTTAT  49 42
        alaE 2826708 .. 2826732 + -15.7  -4.35675   AGGCGTAAGTTAGCG          TCGCGACTGGC ATT GCCAGTCGCGC          TTTTAGTCGGTTTTT 100 33
CYD39_RS13760 NONE
CYD39_RS13770 2829501 .. 2829515 +  -2.8  -3.62597   GTCTGGCGATCGGTA               TGCG AATGTGA CGCA               TTGTTGCCGGATGGC  50 15
CYD39_RS13775 2829734 .. 2829753 +  -6.3  -4.67635   CAACACCCGACAATC            CGACGCG TTTCAT CGCGCCG             TTTTCTCATTTTAAA  78 75
        nrdH NONE
        nrdI NONE
        nrdE NONE
CYD39_RS13795 2833635 .. 2833663 +    -9   -4.8269   ATACGAGTGACATTA        TTCACCTGGATT CCTCC AATTCAGGTGGA        TTTTTGCTGGTTGTC  90 138
CYD39_RS13800 NONE
        proW NONE
        proX 2837324 .. 2837342 +  -3.2  -3.51924   CAACATCCGCTATGA             TTGTTTTC CCA GGAAATAA             TTATCTGAATCACGA  50 148
CYD39_RS13815 2838973 .. 2838987 +  -5.8  -4.29621   CTGAAAGAATGATTT               TGTATT AAT AATACA               TTTACTTTATTTGTC  67 448
        mprA 2839625 .. 2839648 +  -7.4  -3.85817   ACAGGAAAGCGGACA          GGCCGGCA CGCGTTAC TGCTGGCC           TTTCTGACAACAGGT  68 73
        emrA NONE
        emrB 2842445 .. 2842460 +    -9  -5.14563   AACTATCTGATAAAA              GGGATC TGCG GATCCC               TTTTTTAGTAGACCA  93 39
CYD39_RS13915 2855215 .. 2855248 +  -6.7  -3.57144   TTCAGATTGAGCGGA     TCGTCTTGCTCATCG CGCG CCATGAGCAGGAAGG      TTTCCAGCTCGCCGG  60 523
        srlA NONE
        srlE NONE
        srlB NONE
        srlD 2858766 .. 2858787 +    -3  -2.52896   GATCAACGTAACCGG           CGGTCA AGTGATGTTC TGACCG            TGAATTGCCGGATGG  40 7
        gutM NONE
        srlR NONE
        gutQ 2861216 .. 2861227 +  -5.8  -3.68416   TCCAGCGCCCGCGCG                CTGG CCGC CCAG                 TTATGATTATTTTGC  60 92
        norV NONE
        norW 2865441 .. 2865453 +  -4.7  -3.30124   GTGATGCCGGATGGC                GCCGC TTC GCGTC                TTATCCGGCCTACGA  52 45
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 2881312 .. 2881350 +  -8.8  -2.99325   AAGACGCATTTGCGT   CGACATCCGGCATTAACG CTG CATTAACGCCTGATGGCG   CTTTGCTTATCAGGC  66 72
        flhA 2883766 .. 2883806 +  -9.6  -4.72272   ATCTCCTCGCGTTTA  GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG  TTTTTCCTCGCCAAA  95 229
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 2887777 .. 2887789 +  -4.8   -4.2711   GCATTGTTATCGAAT                CGCT CATAA AGCG                TTTCATTCTTTTTGT  66 221
        hilD 2896828 .. 2896860 + -11.3  -4.81163   GATGACACTATCTCC      TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA      TTTTATTCATATTTA 100 295
        hilA NONE
        iagB 2899820 .. 2899853 + -12.7  -4.05669   ATAATTATACAGAAA     TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA      TATTTTTATCAGCTT 100 37
        invH 2922776 .. 2922793 +    -7  -5.95539   CTGCTTTTTGATACA             GCAGCA CCTCGC TGCTGC              TTTTTTTATTTGCGA 100 179
CYD39_RS14270 NONE
CYD39_RS14275 2923924 .. 2923940 +  -6.7  -3.63054   ATTTCATATGCTTTT              CAAATTA AAA TAATTTG              TTGTATCTACCTTTC  64 114
CYD39_RS14285 NONE
CYD39_RS14290 2926277 .. 2926294 +  -7.7  -3.34715   TAATCAGGAAAGTGT             TGCGCGA GAAA TCGTGCA              TCTTTCAAGCACATC  65 461
        pphB 2927149 .. 2927164 +  -3.2  -4.89519   AATTATATAATATAC              GCAACG ATAG CGTTAC               TTTATTTTGTATTCT  72 52
        mutS 2932718 .. 2932735 +  -6.9  -3.26444   TGATCTTTCCTTTTT             CAGGCAC AGAA GCGCCTG              TCTATTGTTCAGACA  59 476
CYD39_RS14340 2934954 .. 2934969 +  -6.1   -3.2827   AGCATTGCGCTCCCG              GACGG ATAATA CCGTC               TTAATCCTTAACTAC  59 51
CYD39_RS14375 2942014 .. 2942027 +  -9.5  -3.11459   CCAAAAAATAGCAAA               GCGGC GCAA GCCGC                TTACGTCATCATCTT  71 30
CYD39_RS14385 NONE
CYD39_RS14390 NONE
CYD39_RS14395 2944877 .. 2944896 + -13.6  -5.40072   AAACGGTAAAAAAAA            GGCCAGTC TGTC GACTGGCC             TTTTTTTGACAAGGG 100 32
CYD39_RS14460 2956036 .. 2956059 +  -6.6  -4.59853   GCTGGTGAAACGTGT          TTATCCCCGC TGAC GCGGGGAACA           TTTTTCAGCCCTTGC  79 44
CYD39_RS14515 2968586 .. 2968600 +   -10  -3.14564   ATTGAGTTTTCACGC               TGCGGT TTC ACCGCA               TTCATCAACCCGTGG  67 415
        queD 2972735 .. 2972748 +  -2.3  -2.80252   GACAAGCGCGTAAAT               CCGCT TTAT ACCGG                TAATGTTCTGACAGT  39 299
CYD39_RS14560 2980322 .. 2980367 +  -5.4  -4.63932   TTCAGTTAACAGAGT CACGACGATAATACCCTGCC GCTTTA GGTAGGGTATTCCTGTTGAG TTTTATTGCGGAATA  74 41
CYD39_RS14565 NONE
CYD39_RS14570 NONE
CYD39_RS14575 NONE
CYD39_RS14580 NONE
CYD39_RS14585 NONE
CYD39_RS14590 NONE
CYD39_RS14595 2987628 .. 2987659 + -11.1  -3.86897   CATGGAACCATACCA      GATATCTGGTAAGC AGATA GCT-ACCAGATATC      TTTATAAAACATCAA  86 63
        barA 2994644 .. 2994658 +  -8.5  -3.30771   TGATATTCGCCGGAT               GGCGG CGTGA CCGCC               TTATCCGGCCTATAA  69 38
        queF NONE
        ppnN 3005570 .. 3005596 + -13.7  -2.62425   TGCGCTTAGCGCTTA         TGCCCGGTTGC CGCCA GCAGCCGGGCG         CTTCTCCCATTCCTT  86 32
CYD39_RS14680 3007426 .. 3007444 + -13.1  -3.61902   CAGCTAAGTCCTTTA             GCGCCGC TTACC GCGGCGC             TTCTCTATGATACAA 100 34
CYD39_RS14685 3008870 .. 3008898 +  -7.5  -4.69053   TTTTAGGATCTGTAG       GCCGGATAAGGCG CTCGC CGCC--ATCCGGC       TTTTGTTGCCTGATG  82 52
         xni 3009752 .. 3009769 +  -5.5  -4.63932   GGAAACTTACAGCAG             CTACGGC TGGC GCGGTAG              TTTTGTTGCCGGATG  74 8
        fucP NONE
        fucI 3015423 .. 3015437 +  -4.2  -3.94381   GCCGGATAAGCGTAG               CGCC ATCGGGC GGCG               TTTATGGAGTTATCT  57 96
        fucK NONE
        fucU 3017309 .. 3017327 + -13.1  -3.17212   AATCTCTTGCCGGTG             CGCCCGC ATGAC GCGGGCG             TTCATCGAATGATGG  91 39
        fucR 3018072 .. 3018118 + -10.9  -4.88736   GTCATAGGCCGGATA AGCG-TGC-GCCATCCGGCGC CGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC 100 34
        csdA NONE
        csdE 3023253 .. 3023277 +  -3.6  -3.15788   AAAAATATCTGCGTA         G-CGGTACCAT GTTT GTGGTACTGGC          ATTTATATTATGGGG  46 317
        rarD 3024504 .. 3024515 +  -2.2  -2.79327   ATGGTTTTCGCCAAA                TCAG CGAC CTGG                 ATTTGCGTCGGATCG  39 381
CYD39_RS14775 NONE
CYD39_RS14780 3026614 .. 3026627 +  -8.1  -5.77988   AACCAACTTAATGAA               CACCC TTAC GGGTG                TTTTTTTGTATCTGT 100 36
CYD39_RS14790 3029619 .. 3029632 +  -4.5  -3.67775   TACGCGTCGCCATCC               GGCGA GAAC TCGTC                TTATTCGGTACGACT  55 114
        mutH 3049557 .. 3049576 +  -9.2  -2.91199   TTCAGCCTGGGCTTT            CGCCCGTC ACTC GACGGGCC             TATAATTACCGCTTC  67 149
CYD39_RS14865 3050333 .. 3050361 +  -9.6  -2.82263   ATCCGCTGTAATCCT       GT-CTCGCTCCCC CGCC GGGGAGCGAATAC        TCACTTTATTTCCTT  69 30
CYD39_RS14870 3050810 .. 3050820 +  -5.4  -3.34028   GTAACAATTACGCCG                 TGCA GCC TGCA                 ATTTTACTTTCCCTT  56 119
CYD39_RS14875 3052443 .. 3052466 +    -6  -2.53876   GCGCCGACCACAATG          CCT-ACCGCCA CCA TGGCGTTCAGG          TAAGTTGGCGTGGCG  48 521
        galR NONE
CYD39_RS14895 3058066 .. 3058078 +  -3.3  -3.11634   TTCAGAGCATCTCCA                GCGCT AAC AGCTC                TTCAATGGTCTGACG  45 49
CYD39_RS14905 3060788 .. 3060814 +  -7.3  -2.57211   CGTGCGCGATTTTAT         GCATGGTGTTG GTACA CAGCACAATGC         CTTCTGCGCCCGCCT  54 446
CYD39_RS14940 3067820 .. 3067842 +  -3.4  -4.62708   AAACGCCCCCAACTG           ACGCTATTTA TGG TAAATTGCGC           TTCTTTTTGTGTGTT  66 107
CYD39_RS14945 3069119 .. 3069142 + -12.5  -4.53303   GGCTAAAGTAAAAGA          TAGCCGGGA TATAAC TCCCGGCTA           TTTTATATAAGAATC 100 35
CYD39_RS14955 3070560 .. 3070572 +  -6.9  -2.76696   TGTTTCTGGATAGGG                TCGCC GGA GGCGG                GTTATTGCGGAGCGA  55 221
CYD39_RS15010 3081149 .. 3081179 +  -8.4  -3.30701   GGCAAGAGACTTACT      G-GCTGACTGGCGA TTAAT TCGCC-GTCAGCAC      TTCGGTTTACTCCCC  69 286
CYD39_RS15025 3082776 .. 3082808 + -14.2  -3.82865   CGCCTGAACGAAGAG     ATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAA      TTTACATCTTATTTC 100 60
        fldB 3089577 .. 3089609 + -12.8   -3.0752   TCGCTGTATTTCCCT     CTCGACGGAACCGCG TTTA CGCCGTTCCGTC-AG      TGTTGGCCTGATATC  83 49
        ygfZ 3091676 .. 3091693 +  -9.1   -3.3514   CCGCCCAGCACAAAG             CCATGCC AGAT GGCGTGG              TTATAAGGTATGCGT  66 205
CYD39_RS15085 3094347 .. 3094372 + -13.3  -2.73007   GCTTTAACTCCTGCA         CGTTACCCGCC AGTC GGCGGGTAACA          CTTTGAACGAGTCTT  85 34
        zapA 3105660 .. 3105681 +  -8.1  -3.28791   TTTGAATAACACTTT           TCGCTTTAC TATG GTAAAGTGA            TTGTGAAAACAGAAT  65 32
        ssrS 3105860 .. 3105880 +  -3.9  -3.35679   GGGTTACAGCCTGCG            GCGGCATCT CGG AGATTCCCC            TTCTGACTGGCGACA  50 7
CYD39_RS15145 3106666 .. 3106685 + -11.4  -3.71649   CCTTTCCTTTTTAGA            GCCCCTGC TTCG GTAGGGGC             TTTCCCGTTTCAGCG  91 196
CYD39_RS15160 3110106 .. 3110117 +  -3.6  -3.30243   TGAATGCCGGATGGC                GGCG TGAA CGTC                 TTATCCGGCCTGCAT  48 49
CYD39_RS15165 3110371 .. 3110387 +  -7.9  -3.84246   TCCTGCGCGGATACC              GGCGCAG CAT CTGCGGC              TTTCATCATTCGCAC  71 74
CYD39_RS15200 NONE
CYD39_RS15205 NONE
CYD39_RS15210 NONE
CYD39_RS15215 NONE
CYD39_RS15220 3119843 .. 3119862 +   -15  -4.42619   AGGGGGAATAAAAAA            CGGGTCGC CGAA GCGACCCG             TTTTATGCCGTATTA 100 30
CYD39_RS15230 3122930 .. 3122941 +  -7.2  -3.30124   ACAGTGCCGGATGGC                GGCG TGAA CGCC                 TTATCCGGCCTACAA  63 48
        metK 3136365 .. 3136383 + -12.4  -4.08546   TACCGTACTTATCAA             GGCCAGCG CCC TGCTGGCC             TTTATCATTGCTGAT 100 80
CYD39_RS15300 3138206 .. 3138232 +   -21  -5.08601   CGACTAATCCCTCCA         CGCTTCCTCCTG CCA CAGGAGGAAGCG         TTTTTCTTGCAGTCC 100 34
CYD39_RS15305 3138773 .. 3138793 +  -9.7  -3.72695   ACTGGTCGCCGGGTA            GTTCCCGAA ACG TCCGGGAAC            TTTCCTGAGCGGACT  79 25
        endA 3139624 .. 3139640 +  -3.5  -4.11512   CTGGATAGCCAAACG              CCGGGGC CAT GACGCGG              ATTTTTTTATTATGC  57 74
        rsmE NONE
        gshB 3141463 .. 3141485 + -10.6  -3.51924   TTGCCCGATAAGGCC           GCCGTCCTTT GGC AAAAGACGGC           TTATATGAGTGACAA  81 138
CYD39_RS15325 NONE
        ruvX 3142586 .. 3142610 +  -2.2    -3.794   ACGCGGTCACGGTTG         CCAGGCTTACT GGGC AATAAGC-TGG          TTTAATGCCTTCAAC  51 66
CYD39_RS15345 NONE
CYD39_RS15350 NONE
CYD39_RS15355 NONE
CYD39_RS15360 NONE
        hemW 3147784 .. 3147808 +  -5.8  -3.73968   CCGACCTGTGGCGGT          TAATGCGC CGCCAGCAA GCGCATTA          TTTAATAACGCCTTT  61 94
        mutY NONE
CYD39_RS15400 NONE
        mltC 3154867 .. 3154878 +  -5.8  -4.11751   ACACCAAATCACAAC                GGCA AATG TGCC                 TTTTAAAACATTCAT  65 189
CYD39_RS15410 3156186 .. 3156237 + -18.3  -3.51708   CATTAATTCTTGCCC TGTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA 100 35
CYD39_RS15420 3159585 .. 3159606 +  -3.8  -2.71364   TCGTTGACGAAGCGA           GGCG-ATTA CGGTT TAATGCGCC           TCGTTGCCCGGATAG  45 104
CYD39_RS15425 3159780 .. 3159794 +  -4.2  -4.30844   AATTTCTATTTATCC               GCCC AAATCAG GGGC               TTTTGGTGGTCAACT  64 118
CYD39_RS15430 3160419 .. 3160432 +  -2.3  -3.21276   GCATTCGATCTGGAT               GGTGT TGTA ACTCC                TGTTGTAACCCAGCA  44 312
CYD39_RS15435 3160694 .. 3160722 +  -7.4  -4.82901   ATAAGAGTAAATCCA        CAGCATTCCGCC TTAAT GGTGAGATGCTG        TTTTTGTCCGGGAAC  83 37
CYD39_RS15440 3161359 .. 3161372 +  -3.9   -4.4891   AAAAATTTTTCTTTA               TTCAA AAAA TTGAA                TTTTCTGATGGTAAG  66 13
CYD39_RS15445 NONE
CYD39_RS15450 NONE
CYD39_RS15455 3162327 .. 3162346 +  -4.3   -2.8552   TCAGGTGTAGGGGAA            TGC-CCAG AGTTA CTGGCGCA            GTTTAGTAAATCGAA  48 44
CYD39_RS15465 3163017 .. 3163062 + -10.6  -2.91239   AGAGCTTTACGTACG GTTTGTGAG-AGGCTGTAGGG AAAGA TCCTACAGCCTACTCACTAAG TAGTCTATTTTTGTA  75 213
CYD39_RS15470 NONE
CYD39_RS15475 3164167 .. 3164198 + -10.8  -3.85698   GGCAAGGGAAGAAAT      CCCCGGGAGCATAG ATAA CTATGTGACCGGGG       TTTCTGAGCGCAGCC  85 12
CYD39_RS15480 NONE
CYD39_RS15485 3165754 .. 3165768 +  -2.9  -4.85599   TTTTTCTGTTCCACT               TGATA ATATG TATCA               TTTTTATCAGGTCAG  68 244
CYD39_RS15490 3166403 .. 3166421 +  -3.1  -3.31144   AAAATAGCTTTAACA             GTCCATT AGCCC AAAGGAC             TTCTCCAGGTCCGGG  48 237
CYD39_RS15500 3166770 .. 3166782 +  -3.5  -5.03314   AAAAAATTATATTAA                TAATT TTT AATTA                TTTTTTAGAAATCCA  74 144
CYD39_RS15505 3167668 .. 3167684 +  -7.2  -3.66256   AAGCGTTCTTTTTAA              CCCGCG TCAAT TGCGGG              TCTTTTCCCCATGTG  67 41
CYD39_RS15530 3173390 .. 3173402 +  -7.7  -3.38088   AAGGTGGACTGTCTG                CCTGA TTA TCAGG                TTCGTTCGCTGCGTT  65 79
        uxuA 3180199 .. 3180223 + -16.5  -3.62275   GCAAATAACCTTCTT          TCGCATGGCGC GAC GCGTCATGCGA          TTTCCCCTACTCAAT 100 33
CYD39_RS15565 NONE
        uxaC 3183498 .. 3183508 +  -3.2  -4.65263   TAATAACTCATGACT                 TCAC AGT GTGG                 TTTCTTTTAACAAAT  66 325
        yghU 3188183 .. 3188215 +   -10  -2.76468   AAAGTTAAACCATGA     TGCCGGATGA-GGTA GTAA TGTCGTCATCCGGCA      TGGTATTCCCTGCTG  71 33
CYD39_RS15660 NONE
CYD39_RS15665 3201397 .. 3201414 +  -2.7  -2.91681   TCGTTCTGATTCTCC             CTCTTAC GGTA GTAAAAG              TGTCTACGCTTAAAG  42 89
CYD39_RS15670 3202361 .. 3202388 +    -7  -3.03124   TGAAGTCGATTACGA        TGGCGCACTTCTG TTA CGCAAG-GCGCCA        TCTTAGGCAATAAAA  58 45
        metC 3205082 .. 3205110 +  -4.5  -4.20516   GGGGATGGACATATA        TGCAGACAATTTC CGT GGAAAAGTCTGCG        TTTGTTGCGTCCGGG  64 48
CYD39_RS15690 3205865 .. 3205892 +  -5.6  -2.60392   AACGCCTGACGTATC        CATAATC-GGCCA GGA TGGCCCGGTTACG        CTTCGTTGACCCGTG  50 32
CYD39_RS15700 NONE
        dkgA 3209132 .. 3209151 +   -15  -5.15969   TTTATCGCACGCCAT            GCCCGACG ATGT CGTCGGGC             TTTTTTGCATTCCGA 100 47
CYD39_RS15710 3210804 .. 3210821 + -12.7  -4.10161   TAACCGTCTCTTCCG             GCCCGAC ATTT GTCGGGC              TTTTCGGAAATCATC 100 68
CYD39_RS15715 NONE
CYD39_RS15720 NONE
        yqhH 3213179 .. 3213193 +  -2.8  -3.21199   GCCTGCGCCTGTATT               CAGATT ATT AAGCTG               TTGCGTTGCTGGCTA  45 15
CYD39_RS15730 NONE
CYD39_RS15735 3216581 .. 3216620 +  -4.8  -3.28708   AATCTGCCGTGTAAA  CCGGCTAATGACGCCTCAC GAA GTG-GGCGACGTCTGCCCG  TTAATGTCGGATTTC  54 443
CYD39_RS15750 3220796 .. 3220814 + -12.4  -3.56821   ATATGTAAATCTGCC             GGGCAGGG TTC TCCTGCCC             TTTACAGGATGTAAT  93 33
CYD39_RS15755 NONE
CYD39_RS15760 3222682 .. 3222696 +  -7.1  -2.73124   CGGACGCTTTACGAC               GCTGG ATTCA CCAGC               ATTTGCCCAATCGAG  58 77
        qseB NONE
        qseC 3231003 .. 3231016 +  -2.3  -3.33744   TTTGAGGCCGTAGTA               CGCTG GTAG CAGAG                ATTTTTGCCAAAAAC  45 17
CYD39_RS15800 3231683 .. 3231695 +  -4.1  -3.10894   ATCGCAAGCATCTGA                GCGAA ATT TTTGC                TTAACTGGTCATCCT  47 9
CYD39_RS15805 3232219 .. 3232232 +  -2.3  -4.15044   TGTAGCCAGTTGCGT               CGATC TTCA GAACG                TTTCTTCGCCAGCAG  56 199
        tolC 3238261 .. 3238318 + -22.9  -2.78384   ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCA 100 36
CYD39_RS15840 NONE
CYD39_RS15845 3240314 .. 3240343 +  -8.5  -2.71681   GATAGATTCTCCTGT       AAGCCCGATGCGCG TAG CGC-CATCGGGCAA       TCATTCAGCGCCTTA  64 36
        zupT 3242314 .. 3242327 +  -2.5  -3.61178   GGCAATAAACATCCT               TTTTA CCCT TAAAA                TTTAACATCACTAAA  50 272
CYD39_RS15860 NONE
CYD39_RS15865 NONE
        dsbI 3245909 .. 3245934 + -15.5   -4.3898   AATAGATAAACCAAA         GCAGAGGTCTG CATT CAGGCCTCTGC          TTTTCTCACAATAAT 100 45
CYD39_RS15885 3248770 .. 3248787 +  -8.3  -2.64243   AGAGTAAAAACGTGA             ACGGGCC TGAC GGCCCGC              TCATATAAGATCTGA  63 34
CYD39_RS15895 NONE
CYD39_RS15900 3251641 .. 3251662 + -13.7   -5.9667   CCGCTATATCTCCTG           TCCCTGGCC ATAA GGCCGGGGA            TTTTTTTATCTTTTT 100 45
CYD39_RS15905 3251934 .. 3251956 +  -9.1  -3.94051   AACAGCCAATCAGAG           GGGGGAGAG ATCCC CTCTCACCC           TTATTCCTTTACTTT  79 39
CYD39_RS15925 NONE
CYD39_RS15930 3259979 .. 3260022 +  -6.6  -3.28712   GCCCGAACCCCGCCA GCTAAACGCCATCCGGCA CGATAAAT TGCCTGATGGCGCTGCGC TTATCAGACCGACAA  61 21
        plsY 3262303 .. 3262325 + -11.2   -4.7416   TTGCTGTAAATCCGT           TGGGGCGGCA TGA TGTCGCCCCC           TTTTTCCGCTTTTAC 100 241
        rpsU 3263843 .. 3263869 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTGTTTTCGTTTATG  90 75
        dnaG NONE
        rpoD 3267791 .. 3267808 + -14.1  -5.60993   CCGCACACGTATAAA             CGCCGCC GCAA GGCGGCG              TTTTTTTATCAGGCC 100 45
CYD39_RS15985 3268631 .. 3268648 + -11.3  -5.72622   AAATCATATAATTAA             GCCACTC TAAA GAGTGGC              TTTTTTGTTTCTGAC 100 54
CYD39_RS15995 3270317 .. 3270375 +  -5.3   -4.2349   GCGCTGGAAATCGCC GAACTGGATTAAGCGGGCTGCGTGTCCTC TTC GCGGACGCGGAACACG-TTAA-CCAGCTC TTTTAAATGTAACGC  65 14
        ygjG 3275618 .. 3275643 +  -8.3  -2.78211   AGGTTTAAAAACGAT         GCCGGAT-GGCG CTA TGCTTATCCGGC         CTGTTTTCCCCGGGT  64 33
CYD39_RS16015 3277829 .. 3277879 + -13.5  -3.29144   GGCGCTGCGCTTATC GG-GCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGCGTCC 100 55
CYD39_RS16025 3279686 .. 3279701 +  -3.2  -2.88427   TCATTGCCTGCCGCC              ACGTCA AGGA TGACGA               TCTGTAGAGGGTATT  44 112
CYD39_RS16030 NONE
CYD39_RS16035 3281749 .. 3281774 + -15.5  -6.38039   TATGCATAAAAGCAG         CGGCTAATGCC ATTC GGCGTTAGCCG          TTTTTTTTTTGCATG 100 245
CYD39_RS16040 3282802 .. 3282828 +   -13  -5.28942   CTGCCCCGTCAAAAA         CGCCCGGCAG CGCACAC CTGTCGGGCG         TTTTTGTTTAACATG 100 59
        sstT 3284243 .. 3284255 +  -6.2  -3.08133   AGAGGACGAACGTCT                GGCG AATAA CGCC                TTGCGTAGCTAAGTG  56 1
CYD39_RS16050 NONE
        mzrA 3285792 .. 3285803 +  -4.4  -4.16371   TCCGAATCATATCAC                TCAC TTTG GTGA                 TTTCATTGTTTAATG  64 51
CYD39_RS16060 NONE
CYD39_RS16065 3286613 .. 3286625 +  -4.1  -2.57683   TGTTGGGCGTACTGC                TGACG CGT CGTTA                ATTATGGCGGACTCT  44 12
CYD39_RS16070 NONE
CYD39_RS16075 3287340 .. 3287377 + -20.7  -4.45485   ATCTTTTCTTTTATA   GCATCGCGCCATCAGGT TATC ACCTGGTGGCGCGATAC    TTTTATGCATATCGT 100 42
CYD39_RS16080 3287977 .. 3287996 +  -6.4  -4.50976   TACTCAATTAAAAAA            GCGAGG GAATAGCG CCTCGC             TTTTGTCATCTGAAG  76 49
CYD39_RS16085 3289013 .. 3289030 + -12.7  -3.73647   CTTTGGCTAATTTCA             GGCGTCC TCCG GGACGCC              TTATTAATAAATACC 100 31
CYD39_RS16090 3289499 .. 3289513 + -12.8  -4.07568   ACGTTTTTCCTGATG               GCGGCG CGG CGCCGC               TTTTAAAGCGCCGCG 100 28
CYD39_RS16100 3291217 .. 3291232 +  -5.4  -2.78384   CCGCTGCGCGCATTA              CTGGTA GATT TACCGG               TGTAGTCAGCCAGAA  50 5
CYD39_RS16105 3291509 .. 3291531 +    -9  -3.99374   CATCGGGCAGCACGC           TGCCCCGACG ACA TGCCGGGGCG           TTATTATTAATGCGC  79 109
        garD 3309452 .. 3309480 +  -9.6    -5.055   ACCGCATAATCTGTA       GACCGGGTAAGCG CCAG CGCT-ACCCGGTA        TTTTTTCGCCCTTAG  93 73
CYD39_RS16175 NONE
        gatZ NONE
        gatA 3312363 .. 3312381 +  -2.3  -3.80461   GAAACCATCCTTGAG             CCTGAGC AGTGC GTCCAGG             TTTGATAATAAATTG  51 2
        gatB NONE
CYD39_RS16195 3314079 .. 3314106 +    -4  -3.15427   CAAATCGCCTCTTAA        TTTTAGGGGAGC AATC GCTCCCCTCACC         TTCCTGGAGAATGTT  48 26
        gatD 3315169 .. 3315197 +  -4.5  -4.06903   CAACTTTCCTGATGG        TACGAGCCAGC AACCTGC GCTGGCTCACA        TTTCCTTTCGAAATT  61 29
CYD39_RS16205 3316253 .. 3316265 +  -6.3  -3.96148   TACAGCGCATTTTTC                TTCAC GCC GTGAA                TTTCTGCTGCCAGCG  65 229
CYD39_RS16215 NONE
CYD39_RS16220 NONE
        diaA 3320123 .. 3320134 +  -4.4  -2.71731   CGATAACACGCTTTT                TCCT CACC AGGA                 TGATTAAGGAGTACA  47 7
        yraP NONE
        yhbO 3322442 .. 3322458 +  -2.1  -3.90744   CCCTCATGGTGTACG              CACCAGG TCA CCACGTG              TTGTTTCGCCAGCCA  52 390
CYD39_RS16250 3322983 .. 3322993 +  -2.4  -2.87211   CGCGGCCAGTTCAAA                 ACCG AAG CGGC                 TATATAACGCCGGGT  40 153
CYD39_RS16265 NONE
CYD39_RS16270 3326014 .. 3326039 + -14.1  -3.11366   ATAGCGCTCCCGTAG         GCCCGATAAGCG CAG CGCT-ATCGGGC         ATTGTTTTGCCGTCA  89 77
CYD39_RS16275 3327154 .. 3327190 +  -7.3  -5.42259   TGGGCTGATTTTATA    ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA    TTTTTTTCGAAGTAA 100 33
CYD39_RS16285 3328840 .. 3328865 +  -3.9  -4.07568   CAGGCCACCGACAAT         CGGCGGTAC-GA AGG TCAGCAGCGCCG         TTTTAAAACGCCCCA  60 333
        argG 3344095 .. 3344110 + -11.8  -5.29782   GTCGTTGATGCAACA              GGCCGC GAAA GCGGCC               TTTTTTGTGAATATC 100 47
        yhbY 3351672 .. 3351686 + -12.8  -5.13137   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 118
        dacB 3353956 .. 3353975 + -16.4  -3.41587   AAGGACATAATAAAA            CGGGCCGC AAAT GCGGCCCG             TTGGCTTTTGTAGAC 100 89
        ispB 3358101 .. 3358116 +  -6.1  -2.79023   TCGGTCTCGCACACA              TCGCG GTGCAG CGCGA               TCGTTAATGCCATTC  53 3
        sfsB 3358659 .. 3358682 +  -9.6  -3.63515   GCGCCTGAAAAATAA          CCCCCGC-AAT CGC GTTCGCGGGGG          TTATTCAGCGTACAG  77 41
CYD39_RS16470 NONE
        kdsD 3365732 .. 3365747 +  -4.6  -2.62616   TTACATATGCATGAT              CTCCTG CGTG CAGGCG               TCGTGTAGAAACTCA  46 2
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
CYD39_RS16505 3369988 .. 3370014 +   -13  -3.92522   TTAGCCAGTGCAGGA         CGGCCTGTTGTG TGA CACAACGGGCCA         TTTGTACAGTTAGCG 100 53
        ptsN NONE
        rapZ NONE
         npr 3371956 .. 3371969 +  -2.5  -4.58283   TTTGTCCATACTAAA               TTTAT GTGA ATAAA                TTTTTCCAGGACTTG  63 243
        yrbL 3372788 .. 3372799 +  -7.2  -3.32844   CGCACATAGCCGGAA                GGCG CATT CGCC                 TTATAGCGTAACGGA  61 194
        gltB NONE
CYD39_RS16555 3384224 .. 3384235 +  -7.2  -3.23979   CGAAGTGTAACCCTT                CCGG CTCC CCGG                 TTGATGCCTTGTGCT  62 31
CYD39_RS16560 3385569 .. 3385584 +  -3.2   -3.1811   TATCAAAAAAAATAT              CATACG AAAA CGTTTG               CTTTATTCTGAGAAC  46 65
        codB NONE
CYD39_RS16570 3388606 .. 3388617 +  -7.2  -3.96327   GCCCTGCAATTCATA                GCGC CCCG GCGC                 TTTCTCCTGCGGCCT  71 465
CYD39_RS16630 3398192 .. 3398210 + -11.7  -3.13082   GTTAAGAAATTTATC             GGGCGCA TCGCT TGCGCCC             TCTCTCTATCTTTCC  83 50
        degQ 3399704 .. 3399733 +  -7.9  -3.11192   TAATCCTGTCTTAAA       CCGGGCATCAGCCT GCG ATG-TGATGTCCGG       TTAACTCATGGTATG  62 38
CYD39_RS16640 3401070 .. 3401087 +    -7  -4.07568   GTTGCGCCTGTTGAC             GCGCAT ACTGCG ATGCGC              TTTTCCAGGCGACCA  70 241
        argR 3411399 .. 3411425 +   -13  -2.70044   GAGCTTTAGTCCCAC         TTCCTCCGTCGT CGT ACGGCGGAGGCA         CCTTTTTGTCCCCTC  85 32
        yhcN NONE
        yhcN 3412417 .. 3412435 + -13.1  -5.47914   CTAACCCGACGACTT             GCCCCCG CCTGC CGGGGGC             TTTTTTATGCTTTTT 100 52
        aaeR 3417188 .. 3417242 +  -8.1  -3.32844   GACATTTCCTGATGG C-G-CTGCGCTTATCAGGCCTG-GGCG GCACA CACCACAGGCCTGATAAG-GCGGACAG TTATGCGGTGCCGCC  65 92
CYD39_RS16775 3430940 .. 3430993 +  -6.9  -2.94099   TTACACATTGACACA CTCCCTGTCATATTCACTACA-CGC CATGTT GTGTTGTGGTGGGTA-GACCGGGAG TCTGTGATGAAAAAG  56 83
        msrP NONE
        msrQ 3432742 .. 3432755 +  -4.5   -4.4078   ATGTGCGACTTTACA               TTGCC CAAC GGCGA                TTTTCGTTCGCAGAA  68 163
        accB 3433451 .. 3433478 +  -2.7  -3.09803   AATTTGACGAGCCAC        TGGTCGTCATCG AGTAA CGA-GGCGAACA        TGTTGGATAAAATTG  43 9
        accC 3434847 .. 3434863 + -10.8  -5.72622   ACGTTAATCTCAAAA              GGCCGG TGAAT CCGGCC              TTTTTTATTTCTGGG 100 45
CYD39_RS16805 NONE
        panF NONE
        prmA 3437522 .. 3437541 + -11.4  -4.36914   AAATAATTCTTGTCA            GCGTGGTC GCCC GGCCACGC             TTTTCTCCACACAAC  93 35
        dusB NONE
         fis 3439491 .. 3439516 +  -8.2    -5.252   CTGCTTGTTTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATACGCATC  91 55
        yhdJ NONE
CYD39_RS16840 3440683 .. 3440717 +  -2.9  -3.46183   ATCTGGAGTAGCGAA    CCGGGCGAT--TTAACC TAT GATTATTTATCGCCCGG    ATTTCTTTTATCCCT  48 30
CYD39_RS16845 3442932 .. 3442948 +  -5.1  -3.89756   AACTCAAAATAATCT              CAGGC TTCTTCC GCCTG              TTGTTCATTTGGCAT  61 53
CYD39_RS16855 NONE
CYD39_RS16860 3448302 .. 3448317 + -10.4  -4.58395   TAACCGGTAAACAGA              GGCGTC TTCG GACGCC               TTTTTAAACGGTACG  89 38
CYD39_RS16865 3448758 .. 3448774 + -15.1   -3.6959   AAATGATACATGCAG              GCGCGGC AAT GCCGCGC              TTTCAGTAATAATAT 100 35
CYD39_RS16900 3455654 .. 3455669 +  -4.7  -3.27476   CAACCGTGATCGTCT              TCCTG CTGGGC CAGGA               TTAATGCTTCAGCCT  49 32
CYD39_RS16935 NONE
CYD39_RS16940 3461036 .. 3461054 + -10.2  -5.54907   GGTCACGTCTTTATA             CGCCCGGT GTT ACCGGGCA             TTTTTATTTTATACA 100 42
        rsmB NONE
        trkA 3463765 .. 3463783 + -11.7  -4.90917   TTCCTCTAATTTAAG             GGGCGCT CATTC AGCGCCC             TTTTTAATTCCCTTT 100 32
        mscL 3464374 .. 3464386 +  -4.7  -3.84451   TGGCCTCCCAGTTCC                CCCGG TTA CCGTG                TTTACCTTTGCGCAG  58 86
        hopD 3479983 .. 3479997 +  -4.3  -3.65415   GTTTTCTTTCCAGAC               GGTTA ATCGG TAACC               TTAATTTGTGATTGC  55 20
CYD39_RS17175 3488751 .. 3488765 +  -8.5  -5.60993   TGAGACGAAAAAAAA               GCGGG GATAA CCCGC               TTTTTTTGTGCCCGA 100 38
CYD39_RS17200 3494353 .. 3494372 +  -2.1   -4.6635   ATGCAGAACGACTAA            GAGCCTA TCCCAT TAGGCTA             TTTTATTCGCCATTT  64 26
CYD39_RS17205 3494895 .. 3494906 +  -5.8  -4.95896   AACAAGTAAATGCCG                CCAG CTTG CTGG                 TTTTTCTCGCTTTCT  83 184
CYD39_RS17215 NONE
CYD39_RS17220 NONE
CYD39_RS17225 3497710 .. 3497720 +  -2.4  -3.02144   TAATGTGCGTAAACA                 GGCG CGG CGCG                 TCTTCCCGGCGCTCG  42 285
         crp 3498902 .. 3498923 +    -8  -5.30616   TTAATTCCGTCAGAA           TGGCGCGT TTTATC ATGCGCCA            TTTTTGTTTGCATCG  91 37
CYD39_RS17240 3501095 .. 3501105 +  -8.2   -2.6193   CCTTCCCTACCGCCT                 GCGC AAA GCGC                 TGCATTCCTTCATTG  56 94
        tsgA 3505872 .. 3505901 + -13.5  -2.88861   ACGCATTGATAATGA       TTGCCGGATGGCG ACAT CGCCCTCCGGCAC        TCTATCCCCCTCCTG  87 32
CYD39_RS17275 NONE
        nirD 3509001 .. 3509021 + -12.5  -5.10077   GCGGTTAATTATTTT            TGGGAGGCG CAA CGCCTCCCC            TTTTTTGACGTATTT 100 33
        nirC NONE
        cobA 3511405 .. 3511441 + -16.1  -3.53224   TGACAGTTTTTTGTC    TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA    TTTCAGGGCCAGGTG 100 54
CYD39_RS17300 3519000 .. 3519021 + -14.5  -4.69664   TATAACACTAATAAA           GGCCGCTTA TTAT TAAGCGGCC            TTTTTAAATCATATC 100 54
CYD39_RS17305 3519363 .. 3519377 + -11.4  -5.42862   GCAGATACAAAAAAA               CCGGGA TTT TCCCGG               TTTTTTTACAGGTCT 100 54
        mrcA 3532446 .. 3532459 +  -9.5  -5.66338   GTTCTGATCAAAAAA               GGCGC TCCG GCGCC                TTTTTTATTGTGTTT 100 34
        igaA 3535559 .. 3535593 +  -9.2  -3.18274   TCATCTGATAGCGCC     GCCGTGCGACAGGGTA TGC TACCCTGTCGCGCAAA     TTGCGTTACCCTGGA  70 33
CYD39_RS17385 NONE
        hslR NONE
CYD39_RS17395 3537667 .. 3537702 + -14.2  -3.13504   TACAGCATCCCGCTC    CGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACA    TAATTTTCATCCCAC  95 93
        pckA 3542678 .. 3542703 + -13.4   -3.4799   ATCCAGCGTTAAGAA         GAAAGGGAGG GTAATA CCTCCCTTTC          TTATGCCTCTTTTGT 100 74
        greB 3545492 .. 3545506 +  -3.4  -2.60032   GAAGAATCCTAAGCC               CCCGCT GAT GGCTGG               CATTTTTGCCAGCCA  42 46
CYD39_RS17430 3547910 .. 3547943 + -13.1  -4.14739   CGCTAATCGGGTAAT     ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA      TTTTGCAATACGTCC 100 35
        feoA 3548546 .. 3548558 +  -4.1  -3.14602   GGCGTTAATAGAAGT                GGAAG CGG TTTCC                TGTTAATACAGTGAG  48 7
        feoB NONE
        feoC 3551216 .. 3551245 + -15.1  -4.21462   TTATCCCGCGTTATG       TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA       TTTTGCGTCATGCCT 100 91
CYD39_RS17450 3552730 .. 3552753 +  -3.9  -4.63218   GTCGCTAAGCTGCTG          CTGG-AATCC GCCGA GGATTTCCGG          TTTTATTCCCGGCCA  69 445
        gntX NONE
CYD39_RS17465 3554490 .. 3554516 + -12.3  -2.68823   TTTCCCCGCATCCAT        GCCCGAT-GGCG CTTG CGCCTGTCGGGC         CTTGTCTGCCCCACC  81 44
        gntT 3556257 .. 3556282 + -17.7  -3.62255   GTGCTCTCACCATCA         TAAAGCCGGGG AAAT CCCCGGCTTTA          TTACTTCTTCTTCGC 100 118
        malT 3564068 .. 3564081 +  -5.9  -3.23274   TACGGGGTTTAACGT               GTGCC TGAT GGCGC                TTCGCTTATCAGGCC  54 29
CYD39_RS17510 3571001 .. 3571021 +  -2.6  -3.60971   GAGTTCGCCGCCAGC            GAGGAT AATACGAAA ATCCTC            TTTCGCCATTAGCGT  47 364
CYD39_RS17530 3574460 .. 3574477 + -12.7  -4.08767   TCGTAATAAAATCCG             GGGCGGT TTAT ACCGCCC              TTTTCGCCACATACC 100 35
CYD39_RS17550 NONE
CYD39_RS17555 3581205 .. 3581226 +  -9.3  -4.11692   GCTTAAATAATATCC           CTGGCGGGC TACG GCTCGCCTG            TTTTAAGGATCAATA  80 31
CYD39_RS17560 3582154 .. 3582183 +  -8.6  -5.27335   GGGACTTTAAGCGAT       GACGAAAGCGGGC TTCTT GCCCGCTAT-GTC       TTTTTATTTCAGCAC  95 31
CYD39_RS17630 3600424 .. 3600435 +  -4.4  -2.84126   ACCACCTGAATTTCA                TGGT TATT ACCA                 CTTTAAGCTTTATCA  48 132
CYD39_RS17635 NONE
CYD39_RS17640 3602582 .. 3602601 + -10.8  -4.41548   AAAATAAAAAACAAT            GGAGTAAC GAAA GTTACTCC             TTTTATAAAATATAA  90 34
CYD39_RS17645 NONE
CYD39_RS17650 3604825 .. 3604836 +  -7.2  -4.37092   AACTTCAGCGTATCG                GGGC TGAA GCCC                 TTTTCTACCCGCAGT  77 221
CYD39_RS17660 3607012 .. 3607045 + -14.5  -2.72991   GCAGATACAATCCAC     GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC     TGATTGACGGTATAC  83 79
        panM 3618729 .. 3618741 +  -4.8  -4.09685   GCCACCCCTTCCGGC                CCCA TAAAC TGGG                TTTTCAGCCCTGCGG  62 512
        rsmD NONE
CYD39_RS17755 3625352 .. 3625368 +  -6.5  -4.58283   TTTTGCTGTAACGGC              GCCGC CTCATTA GCGGC              TTTTTCCCGCCGTTG  78 312
CYD39_RS17765 3626241 .. 3626260 + -12.2  -2.95223   AATAATAGCGCTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTCCGGTTA  80 40
        zntA 3628516 .. 3628543 + -13.4  -3.30007   AATAATCCTCTCCCG        CCCGGCGGCGTCG CGT CG-TGTCGCCGGG        TTATCCCGCGATATT  95 36
CYD39_RS17775 3630526 .. 3630549 +  -6.7  -2.73542   TTTCGCCAGTTTGCA          TGTTGCGCA CCGTTT TGCGCACCA           TCATTACCGGTTCAG  52 198
CYD39_RS17785 NONE
CYD39_RS17790 3632105 .. 3632132 + -14.1  -5.40072   TTTACGATGATGATG        CGGCCTCCGGC AGTGCA GACGGAGGCCG         TTTTTTTAAGCGCCA 100 43
CYD39_RS17800 3634538 .. 3634552 +  -2.8  -2.57344   GGCAACGTTGGTCCT               GATATG TAC CAGATC               GTTCTGGGAAAAGTG  40 74
        acpT NONE
        nikR 3635707 .. 3635721 +  -2.8  -4.83615   GCAATAATGTTCACG               CCATTG TGC CAATCG               TTTTTCTGAAGCGTA  68 120
        pitA 3643969 .. 3643990 + -13.7   -5.8187   GCTTATCTAATACGA           GCGGGTCAG GAAA CTGGCCCGC            TTTTTTTATTCAGTG 100 134
        uspA 3645253 .. 3645270 + -10.5  -4.99043   GGCTATCAACAACAA             CGCCCGC TTAT GTGGGCG              TTTTGTTTATCCCCC  93 121
        dtpB 3647112 .. 3647150 +  -3.8  -3.53012   GACGATGGCGTTGGG  CGTCGCGA-CATCCGCC AGCGGC GGCGCATAATCGGGACG   TTTAACCACCACGCG  51 183
CYD39_RS17870 3651384 .. 3651399 +  -3.2  -2.50514   GTTGACGTTATTTAC              GCTCTG ACGC CACAGC               CTACTTGTTTTTCCT  42 19
CYD39_RS17875 NONE
        gorA 3653805 .. 3653855 +  -8.3  -2.51464   GAGTTTGTGACCATG CGTTAAGATCTTGTGCGCCCATCT TCGA GGGTGGGCGCACAAGC-CTGCATG ATTAATACGTACTGA  63 20
        treF 3661121 .. 3661142 +  -5.9  -5.60689   GAATCGCATCATAAA           TGGCTGA CTGAATTT TCAGCCA            TTTTTTATTGTCTGC  93 58
CYD39_RS17920 3663791 .. 3663805 +  -4.2  -4.64992   TATCCAGCATGACCA               GCGC ATCCGGC GCGC               TTTCTATTTTTTGCC  71 489
CYD39_RS17930 3665451 .. 3665469 +  -2.2  -3.06515   ACGGAAACCATTAAA             GAGGCCGC AGA GTAGCCGC             ATTTTCAGCATCCAC  42 11
        yhjD 3666589 .. 3666602 +  -3.1  -2.72661   CTTGCTGCCGGATGG               C-ACGC ACG GCGTCG               TCATTCGGCCTACTG  43 48
CYD39_RS17940 3668244 .. 3668267 + -18.2  -2.66326   AGGCGTTGTAATAGG          GCGCCGGATG GCAT CATCCGGCGC           TACGTTTCACGTTAC 100 30
CYD39_RS17955 3672417 .. 3672442 +  -7.5  -3.42283   CGCTTACCGGGCCGA         CAGGCGGCA GCTTACTG TGCCGCCGG          TGTTTCCGTCACTTC  63 68
        bcsE NONE
        bcsF NONE
        bcsG 3692218 .. 3692260 + -12.7  -4.60797   TGAGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC 100 279
CYD39_RS18030 3694126 .. 3694146 +  -6.9  -3.14132   CGCTACGCTTACCAG            GCCTACA GGTACGG TGTAGGC            TTGATAAGGCGCAGC  59 68
CYD39_RS18070 3704218 .. 3704236 + -14.6  -4.03204   TTCAGATACAAAAAA             CCCTGCTC GTT GAGCAGGG             TTTCTGAATTTGGTC 100 140
         tag NONE
CYD39_RS18130 3714823 .. 3714862 +  -2.9  -3.34716   CGCGTAACCATAGCT GGCAATGCGCGCAGAATAG ATTT CGATTTTGC-CGC-TGGCC  GTTTTTAGCGGATGG  47 504
CYD39_RS18140 3717647 .. 3717669 +  -6.9  -4.54727   TAATAAGCCTGTTCC           GGTTGGCGC ATGCC GCGCTTACC           TTTTGATTTACGGAG  77 211
        ghrB 3718671 .. 3718711 +  -7.8   -2.8007   GGCGGGATAACGCTA CAG---GCCCGATAAGCGC TGGCTT GCGCTTATCGGGCAGACTG TCATTACTGGGTTGC  60 31
CYD39_RS18155 3720177 .. 3720195 + -10.3  -4.07687   CCCTTTCTGTTTTAA             CGGTCCT GCGCA AGGACCG             TTTTCCCCGCCCGAT  82 48
        cspA 3720679 .. 3720698 + -11.4  -6.36459   GCTCAGAATTTTGAA            TCCCTGCC TGAT GGCGGGGA             TTTTTTTTTATTCCA 100 50
CYD39_RS18165 3721532 .. 3721554 +    -7  -5.72622   GAGGCATCAGAGAAA           GAGTCCATTT AAT ACATGGGCTC           TTTTTTGTTTCTGGC 100 189
CYD39_RS18215 3728780 .. 3728797 +  -9.9  -3.22774   TTAGCTAAACGACAA             TGATGGC TCCG GCCATCA              TTCATCATCACTGTA  72 33
CYD39_RS18235 3733905 .. 3733919 +  -7.8  -2.52635   TCAGCTTATGAATCA               TCGCCG TGG CGGTGA               CTTCCTGATCCGCCT  53 190
CYD39_RS18245 3737077 .. 3737089 +  -3.3   -3.9398   CCGCCTGACCCTCAT                TTGCG CCC CGCCA                TTTGTAGCGTTATGG  55 134
        avtA 3738791 .. 3738809 +  -2.3   -3.3375   CGCGGCACAAAGTCC            GC-CGTCG TCAC CGCCGCGC             TATTCTGCTGTTCCT  45 423
CYD39_RS18265 NONE
CYD39_RS18270 3741506 .. 3741516 +  -2.4   -4.4009   AATAGTCGTAAAAGT                 CGCC ATA GACG                 TTTTATAAAATAGAG  59 7
CYD39_RS18275 NONE
        yiaM 3743075 .. 3743104 +    -2  -2.92896   GATTCCTTTCAACAA       CCACAGCAAGGA GCCTAA TCATGGCCGTGG        TGATATTTCTCTGCT  41 8
        yiaN NONE
CYD39_RS18290 NONE
CYD39_RS18295 NONE
        ulaD NONE
CYD39_RS18305 NONE
        araD 3749567 .. 3749583 +  -4.4  -4.48987   TCCAGGCCAGCGACA             CGCC-AG CGGC CTCGGCG              TTTTCATTCTGCCGG  68 521
CYD39_RS18320 3752280 .. 3752291 +  -7.2  -3.63515   AATACTGTGCCGGAT                GGCG GCTG CGCC                 TTATTCGGCCTACAA  67 39
CYD39_RS18330 3755219 .. 3755245 + -12.4  -4.82901   CCAGAAAAATAAAAA         GCACATCAGG TTCATTT CCTGATGTGC         TTTTTATAAAGCAAC 100 216
CYD39_RS18365 3763433 .. 3763453 + -12.6  -3.17075   AATATGAAGGCGATA            CCCTCTCC CTTGT GGAGAGGG            TTAGGTTGAGGGGAA  86 161
        mtlD NONE
CYD39_RS18375 3765638 .. 3765648 +  -5.4  -2.76263   CAAAAAGGATTTTAT                 TCTC AAC GAGA                 TAATTAAATAGTGAG  50 400
CYD39_RS18385 3766259 .. 3766269 +  -3.2  -4.59773   AGTTCATTTTTAACG                 GTAG TCC CTGC                 TTTTTCAGGATGAAA  66 149
CYD39_RS18390 NONE
        sadA 3771796 .. 3771818 + -16.4  -4.30448   ACTCCCGACATCAAA           GGCAATGGCA TAA TGCCATTGCC           TTTTCACTTCCCTTT 100 53
        lldP 3773708 .. 3773719 +  -4.4  -2.86271   GCCTATGTTTTAACC                TGGA TGAT TCCA                 TGATTGTGATGCCCA  48 11
        lldR NONE
        lldD 3775686 .. 3775705 +  -4.8  -2.73268   GATGCCGCCTGAACG            CCTGGCGC GTGA GAGCCCGG             TAAATTTCTGCTATT  49 29
        trmL 3776383 .. 3776401 +  -5.9  -2.88579   CCAACAGCGTAGCGG             CGCGCTG GCCAA TGGCGCG             TCTGTCAACGCTTAC  51 188
CYD39_RS18425 3778815 .. 3778833 + -11.7   -3.1352   GCCCTTAACCCGACT             GGCGGGA ATCCG TCCCGCC             TCTCTTACCTTACAG  83 33
CYD39_RS18430 3780218 .. 3780251 +  -8.3  -5.32944   GCGAATTCTTCGCTC    CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG     TTTTTTAGTTGTACC 100 52
        gpmM NONE
        envC NONE
CYD39_RS18470 3787595 .. 3787610 +  -4.6  -3.57144   GGAAAGACCAGAGCA              GCGTCT GATA AGCCGC               TTTCGCGCTGCGGAC  52 98
        rfaD NONE
        rfaF NONE
        rfaC NONE
        rfaL 3795476 .. 3795505 + -14.4  -4.77036   GAAATAGATAAAAAA       CGCGCTGATACT TATTAC GGTATCAGCGCG        TTTTTCATCATCCGG 100 30
CYD39_RS18560 NONE
        coaD 3807127 .. 3807139 +  -9.1  -3.91352   GGCAATAGAACGTCG                CACGC TGT GCGTG                TTTCGTTGCGACTAT  73 85
       coaBC NONE
CYD39_RS18595 3811174 .. 3811194 +    -9  -3.33492   AACGTCATAATACTG            CCGCAAGC GCTGA GTTTGCGG            TTATAGCGTGGGTGC  71 58
        slmA 3811991 .. 3812007 +  -2.2  -3.36991   TATCAGGTTTTTCTT              CCAGAT AGGCA ATCAGG              TCTTTCAGCGTAATG  45 171
CYD39_RS18615 3814367 .. 3814396 +   -10  -3.93695   TGGCGCTCAATATGT       CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG       TTTATCGGTAGTACG  82 44
CYD39_RS18625 3816272 .. 3816290 +  -8.8  -4.27465   GAAATGATTCACCGG             CGGCGC GTCCGGG GCGCCG             TTCTTTTAAATTATC  80 42
CYD39_RS18630 3817142 .. 3817169 +  -9.2   -4.3467   CCAAATCCGGGAATA        TGCTGAGCAG CCAGCCAT CTGCTCAGCG         TTTTGATCTGCGGAT  85 44
CYD39_RS18640 3819682 .. 3819697 +  -3.3  -2.78816   CAAATTGTTGGCAGA              CTGAA CCCACT TTCAG               TATCATGCCCAGTCA  43 22
        rpoZ 3820022 .. 3820032 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  40 32
        spoT NONE
        trmH NONE
        recG 3825072 .. 3825092 +  -7.5  -3.06133   CCGCCTTCTGCACCC            CGTCGAGGA TCA TCTCCGACG            TTAACTGCCGGGTTA  57 171
        xanP 3828588 .. 3828607 + -10.7  -2.63479   CGTAAAAACCCTGCG            GCGGCGA CACGAT TCGCCGC             TGCTGTAACGCTCTT  74 36
CYD39_RS18680 3830805 .. 3830827 +  -4.8  -3.17146   TAATCGGGCTTCTGG           CTATTGTTGC CCA GCGCCAGTAG           TGTATTGTCACGCAC  49 423
CYD39_RS18695 3834925 .. 3834953 +  -6.7  -3.01791   GGGAAGGAGAAAAGC        CCCACATCTGG AACATGG CCGGATGTGGC        TATTAACGAAGCCAT  58 346
CYD39_RS18745 NONE
        misL 3848737 .. 3848755 + -14.6  -4.07568   TCAGGTAACAACAGA             GCCGCTGA TCT TCAGCGGC             TTTTACCCGGAAACG 100 42
CYD39_RS18770 3851633 .. 3851653 + -14.1  -4.43911   CCTGAAGCGGCTAAA            TAGCCCCAT TTA ATGGGGCTA            TTTTACTTGCCATTT 100 48
CYD39_RS18795 3858158 .. 3858185 +  -9.2  -2.71763   TGCTTTTGTACCAGC        TCCAGCATCG-CG ATA CGTCGATGCTGCA        TAATCTCGTTATCCG  60 480
CYD39_RS18840 3866999 .. 3867013 +    -2  -3.21395   TGTAACCGGTTTCTG               TTCGCT AAA AGCGCG               TATTCTGGAGCGAAT  44 78
CYD39_RS18845 3868831 .. 3868844 +  -3.7   -4.0896   AGTAGCAGCGGCGCA               CCGGC CAGC GCCAG                TTTTACCGAACGTTT  60 422
CYD39_RS18855 NONE
CYD39_RS18860 3870791 .. 3870805 +  -2.1  -4.63526   CCAAAATACTCATCA               TTCCT TTAAT GGGAA               TTTCTTTGTCATTAT  65 247
CYD39_RS18940 3887136 .. 3887152 +  -2.2  -3.54158   ATGATAGCCTGCAAC              GCCG CCTGCGGAT CGGC              TTCGTTATTCAAATC  47 442
        tisB 3889654 .. 3889675 + -17.3  -3.69354   TCAAGCCGCACCGAA           GGGGAGCGG GCAA CCGCTCCCC            TTTCACCTTATCCGC 100 48
CYD39_RS18970 3890618 .. 3890637 +  -7.8  -4.92385   AGACGTAACACATTC            TCGGCAAC ATTT GTTGCCGC             TTTTGTTTACATATC  87 59
        emrD 3891981 .. 3892001 +  -9.6  -3.66178   GTTTAACGTTTCCCT            CGCCAGGC TTTTT GCCGGGCG            TTTCACATTCCGGCG  77 35
        dsdX NONE
        dsdA 3896898 .. 3896937 +  -6.5  -3.30771   AGTGCCGGAAAGACG GC-T-GCGCCATCCGGC ACGCCATC GCCTGATGGCGCTACGC  TTATCAGGCCTGTGA  59 50
CYD39_RS19030 3902071 .. 3902100 + -10.7   -3.6707   CCTGATTTATCGCCC       GGTTTCCGTCACC CATA GCTGACGGAACCC        TTTCACCTCTTCCAT  83 36
        torR 3916822 .. 3916856 +   -10  -3.15663   AGTTTCGCTGCACTT     CAATGTCGTTATCGCC CCA GGCGATATCCACAATG     TTGATGGCGCTGCCT  67 399
        torS 3920718 .. 3920755 +  -8.4  -3.65529   GGTGATCTGCGCCGG  CTGCGCTGCCAGC-TGCG TCAG CGCTTGCCG-CAGCGCAG   TTTCCATCGCCGTGT  68 383
CYD39_RS19135 3925815 .. 3925840 + -14.9  -2.88544   GCTACTAACAATAAA         GAATGCCTGAA TGTA TTCAGGCATTC          TATGTCAGCCTCACC  89 33
        rpmH 3933092 .. 3933105 +  -2.3  -3.58343   TCGTGCTAAAGGCCG               CGCTC GTCT GACCG                TTTCCAAGTAATAAA  49 1
        rnpA NONE
        yidD NONE
        yidC 3935455 .. 3935472 + -12.7   -5.4505   GGCCTACAATCAAAA             GGCGGTC ATAT GACCGCC              TTTTTTATTGCAACA 100 118
        mnmE 3937015 .. 3937057 +  -6.4  -4.53163   CGCGCAACGTCGCCC CGTATTCTTAGC-GCCACAC TTTTC GTGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG  76 173
CYD39_RS19185 NONE
        yidZ NONE
CYD39_RS19195 NONE
CYD39_RS19200 3941110 .. 3941128 + -14.6  -4.14945   GTTTCTATACGTTAA             TGGGCGGT TTT ACCGCCCA             TTTCGTTGTTCTTAG 100 473
CYD39_RS19215 NONE
        yieH NONE
CYD39_RS19260 3953258 .. 3953275 + -12.7  -3.38272   CAGCGCACAAAAAAA             GGCCGTC TATC GACGGCC              TTCTGCCTGGTAATA  90 134
        asnA 3970989 .. 3971010 +  -5.7  -2.75064   GCGCATCAACGCCAG           GCAGAACGC TTTT GCGCACTGC            TCGTTAAATCCCCCC  50 450
CYD39_RS19360 3975795 .. 3975814 + -10.8   -3.0873   TAGATTCCCACAAGA            TAATCGCC ATTG GGCGATTA             TCTTCACCTGATTTC  76 94
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 3979849 .. 3979872 +  -9.5  -2.75844   AAGAAAAGCAGGGCA          CGCGCCACC CTAACC GGTGGCGCA           CTTTGACGTGGAACC  69 113
        rbsK NONE
        rbsR 3982031 .. 3982058 +  -6.2  -3.49777   CAATTGCTGCGTAAC        CGCCAGAACGCTG TTG CCGC-TGCTGGCG        TTATCGTCTGTCAGA  57 231
CYD39_RS19405 3985977 .. 3985990 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
CYD39_RS19410 3986238 .. 3986273 +  -9.2  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
CYD39_RS19415 3989346 .. 3989358 +  -3.3  -3.05816   AGAGACGATTTTCAG                CACTG ATT CAGAG                TTGAGTACGCAATAA  45 56
         rrf 3989634 .. 3989649 +  -3.3  -2.82742   AAATTAAGCAGTAAA              CTGAT GTAAAA ATCAG               TGGTTGTAAAAGAAT  43 44
CYD39_RS19425 3989742 .. 3989761 +  -2.8  -2.79684   GAGTCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  41 21
CYD39_RS19430 3989838 .. 3989857 + -10.8  -6.11644   CCCTGCCAGAAATAA            TCCTTAGC ATCT GCTAAGGA             TTTTTTTTTGCCTAA 100 33
        maoP 3991232 .. 3991244 +  -6.9  -5.40072   GATGATTAATAAAAA                GGGCG TAA TGCCC                TTTTTTTACGCCAAC  91 32
        ilvL 3993245 .. 3993268 + -13.8  -5.78622   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTGGCCTGA 100 50
CYD39_RS19455 NONE
        ilvM NONE
        ilvE 3996227 .. 3996241 +  -4.4  -2.78679   AATAAATAAAATTAA               TATTTT CCC AAAATA               ATTTGCGTCACAGGA  47 39
        ilvD 3998219 .. 3998243 +  -3.7  -2.91264   AAATCGAAACTGGGA         GGTTGATGAT GGCGGA ATC-TCAACC          TCTGTCAGTCGCGCC  46 20
        ilvA 3999791 .. 3999812 +  -8.7  -2.63301   GCGTTTAGTTTTTCA           GGCCCAC AAAGTAAA GTGGGCC            TGATATCCAGATATG  63 45
CYD39_RS19480 NONE
CYD39_RS19485 4000747 .. 4000763 +  -9.4  -5.40072   AGAACGCATCAATTA              GCGGCT CATGC AGCCGC              TTTTTTTGCGCGCAG 100 63
        ilvC 4003300 .. 4003327 +  -9.9  -5.28942   AAGCAGACGATGTAG       GCCGGGTAAGGCG TAGC CGCC--ACCCGGC        TTTTTATTTGCGATA 100 86
CYD39_RS19505 NONE
CYD39_RS19510 NONE
CYD39_RS19515 4006018 .. 4006043 + -13.3  -3.32202   GCTGATTGACCTTTT         CCAGGCTGCCT GAAA AAGCAGCCTGG          TCTTCTCTGGGCCTC  95 36
CYD39_RS19520 4008391 .. 4008405 +  -2.7  -4.30576   AGCTGTTCCGCAACA               CGGGG CGGTA CCGCG               TTTTGCTGATGAAGC  62 285
        trxA 4011519 .. 4011569 + -10.6  -2.74563   GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATGGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG  74 35
CYD39_RS19540 NONE
         rho 4013201 .. 4013232 + -14.6  -4.21098   AACCTGGTCTTTACC      TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG       TTTTGCGATTCATCT 100 39
        wecA NONE
        wzzE 4015590 .. 4015613 + -12.5  -3.06696   TTAGCAACACCTCTG          CAGTAGGGG GCTGGG CCCCTACTG           TCTATTCGAAGAGAA  83 37
CYD39_RS19560 NONE
        wecC NONE
        rffG NONE
CYD39_RS19575 NONE
        rffC NONE
        rffA NONE
        wzxE NONE
CYD39_RS19595 NONE
        wzyE NONE
        rffM 4025576 .. 4025607 +  -3.8  -3.56092   TCCCTTCTGATGACT      TGAGCAGCG-GAT TGTGCTT ATGGCGCTGCTCA      TTTACAACATAATCG  52 44
CYD39_RS19610 NONE
CYD39_RS19615 NONE
CYD39_RS19620 NONE
CYD39_RS19625 NONE
CYD39_RS19630 4027692 .. 4027707 + -11.8   -5.8901   CCGACCAATTTTGAA              CCCCGC TTCG GCGGGG               TTTTTTGTTTTCTGT 100 34
        cyaA 4035234 .. 4035246 +  -2.7  -4.75372   ATCATGACGCGCCGC                TATTG CAG CAGTA                TTTTTCGTAAGTGCT  68 3
CYD39_RS19660 4035825 .. 4035838 +  -2.3  -4.21737   ATCCAGACCGTTCAA               AACGC TATC GCGTC                TTTCATTGTTTTCGT  57 130
CYD39_RS19665 NONE
CYD39_RS19670 NONE
CYD39_RS19690 4038551 .. 4038561 +  -2.4  -2.56715   CGCAACGGGAGATGG                 CCCG TCC CAGG                 TCAATTACTGAGGAT  39 4
        dapF NONE
CYD39_RS19700 NONE
        xerC NONE
        yigB 4041842 .. 4041852 +  -8.2   -5.1166   CCCCGGTAAGCGAAG                 CGCC CCG GGCG                 TTTTTAGTTTTCATG  87 115
        uvrD 4044395 .. 4044408 +  -4.5  -4.42765   GCTGATAGCCTTAGC               GGTTG TCAG CGACC                TTTCATTTTTTCCCG  66 371
        corA 4045532 .. 4045543 +  -4.4  -3.73294   AAGTTACAGGCTCCA                GGTA TTGA TACC                 TTTAACCTCTTTTTC  58 86
        pldA 4048873 .. 4048894 + -12.3  -4.63479   TTGCAGTTTCTCTCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTGATTTATGGTG 100 60
        recQ NONE
        rhtC 4051814 .. 4051824 +  -2.4  -2.50816   CAGATCGATAGCGCC                 TGCG GCG CGCC                 ATTGCTGGATACCCA  38 404
        pldB 4053203 .. 4053213 +  -4.6  -3.91798   AGCCTAATTTATCCA                 GCGG AAA TCGC                 TTTGCTTAGAGGTTA  59 6
        yigL 4054054 .. 4054070 +  -6.6  -3.12999   TGTGATTGTTTGTTA              GTTGAC CAGTT GTCAAC              TTCACTCTCCGCTAC  58 41
CYD39_RS19775 4055320 .. 4055330 +  -3.2  -4.25104   GGCTAAATCTTCCGG                 CGTA ATC TGCG                 TTTTGCTGGCCAGCG  62 327
        metE 4058685 .. 4058701 +  -9.4  -2.72471   CTGTTATGTTCCCTG              GCGACG ATAAA CGTCGC              ATTGTCTCATGGCGC  69 351
CYD39_RS19795 4060119 .. 4060130 +  -2.2  -3.60316   CAAACATCGTAATGC                GCTG TGGT TAGC                 CTTTTTTCCCACCGT  49 98
CYD39_RS19805 4061978 .. 4061994 +  -9.4   -5.2853   CCTCTCTTTTGCAAA              GGCCGA CGCGT TCGGCC              TTTTCTTTTTGCGTG 100 45
        rmuC 4063561 .. 4063578 +  -2.6  -3.11727   AGTCCTGGCGCAGAG             TAGGGC AAATTG GCCCAA              TCTGTTACACTTCTT  43 58
        ubiE NONE
        ubiJ NONE
        ubiB 4066713 .. 4066723 +  -2.4   -2.8937   GCCGCAAGTCAATGT                 CGTC CCG GTCG                 TATGTAAAAGTATGT  41 107
        tatA NONE
        tatB NONE
        tatC 4068429 .. 4068450 + -15.9  -2.62184   ACTGAAGACTAAACA           CAACCGCCC GCCA GGGCGGTTG            TCATATGGGGGCAAG 100 29
        tatD 4069613 .. 4069633 +  -3.2  -5.02074   GCGGTTCGCTAACGG            AGGTACGT TTTCC GCGTACCA            TTTTTTCCAGGGTGA  76 389
        ubiD 4071423 .. 4071464 +  -2.4  -3.01712   AACTGAAAGCGGACA TCGACA--TTTCAGGCTGTG GCGA CTCGGCTTGAAAAATGTCGG TATTGACCCGACACC  42 39
CYD39_RS19860 4072206 .. 4072223 + -12.7  -4.74504   ATTTAACTATTTTAT             GGGACGC AGTA GCGTCCC              TTTTTACGTTAGCCT 100 35
CYD39_RS19865 4074380 .. 4074413 + -21.1  -3.09933   TGGCTGCCTTTGCTC     ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA      TTCGCTCAGTTGCCG 100 132
        pepQ NONE
CYD39_RS19885 NONE
        trkH NONE
        hemG 4082374 .. 4082386 +  -4.9  -3.16068   TACGAAGTTTAATTC                TTTGA GCA TCAAA                CTTTTAAATTGAAGA  52 385
CYD39_RS19900 4083954 .. 4083967 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
CYD39_RS19905 4084115 .. 4084128 +  -5.3  -2.71745   TTGTGAAATAACTCA               CATAC TGAT GTATG                CTTCGTTATTCCACG  49 61
CYD39_RS19910 4084292 .. 4084325 +  -4.5  -4.49756   GTTTACGAAAAAATA     CTTCAGAGTGTACCT GAAA GGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  69 51
CYD39_RS19915 4087432 .. 4087443 +  -4.4  -2.78679   AGAACGTAAAAACGG                TCTG ATAA CAGA                 ATTTGCCTGGCGGCC  47 90
         rrf 4087567 .. 4087616 + -22.5   -2.7035   GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTCGGTGAG 100 28
CYD39_RS19935 4089252 .. 4089262 +  -8.2  -3.62597   AACGGCGCTTTTACG                 CGCC CGC GGCG                 TTATTAAAGAGTAAA  69 1
CYD39_RS19940 NONE
        dsbA 4090986 .. 4091004 +   -16  -4.87273   AAAAAATAAAAAGAA             CGCCGGTC ACT GACCGGCG             TTTTTATAAGATGTT 100 32
        polA 4095299 .. 4095325 + -18.1  -5.45652   GCTGAATATTTTAGC         CGCCCCAGTCA GTTTA TGACTGGGGCG         TTTTTTATTGGGCGT 100 250
CYD39_RS19965 4096511 .. 4096564 + -19.9  -3.99405   AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC 100 31
        yihI 4097172 .. 4097190 +  -6.1   -3.3636   CTTGCCCGTCCTGCT             TATAACC CTTCC GGTTATA             TGTTATCTGGTGTGG  59 58
        hemN 4098957 .. 4098980 +  -7.5  -2.68544   CATCGGAACAGTAAA          GCGCAAAAT AGCAGC GTTTTGCGC           TCAATTATTAATCTT  57 281
        typA 4105387 .. 4105413 +  -8.7  -5.80364   TCTTACGGATAAAAA         CCCTGCCGA AATGAAAAC TCGGCGGGG         TTTTTTTATTCACAT 100 48
CYD39_RS20080 NONE
CYD39_RS20085 4123933 .. 4123959 +    -8   -4.3821   AAAACGGCGCTGTGA         TGCAGGCGATAT TGA ACATCGTCTGCG         TTTCTATTGTCTTTT  79 89
        yihX NONE
CYD39_RS20095 NONE
         dtd NONE
CYD39_RS20105 4127139 .. 4127150 +  -7.2  -4.39828   TTCGCAATACTGAAA                CGCC AGGG GGCG                 TTTTCTCCAGGTGTT  79 219
CYD39_RS20125 NONE
CYD39_RS20130 4130041 .. 4130057 +    -5  -3.93695   TAAAGGGAGAGCGCG              GCCCAG ATAAA CGGGGC              TTTATCGCTGCTGAC  63 517
CYD39_RS20155 4136327 .. 4136341 + -12.8  -3.35597   CTTCGAACGAAAAAA               GCGCCC CTG GGGCGC               TCTTTCGGCAGTCGC  90 202
CYD39_RS20170 NONE
CYD39_RS20175 4142846 .. 4142870 + -15.8  -3.27475   TTGTCAATCATCTGA          GACAGCGGGA AATGC TCCCGCTGTC          TGTTGTGATGACAAA 100 157
CYD39_RS20180 4144470 .. 4144484 +  -8.5  -5.31059   TAACGCCAATAAAAA               GCGCC GATCA GGCGC               TTTTTTCGTTCATGT  95 96
CYD39_RS20195 4146397 .. 4146411 +  -8.5  -3.28712   TTGAAATTGCCGGAT               GGCGG CGTAA CCGCC               TTATCCGGCCGACAA  69 37
CYD39_RS20225 4152942 .. 4152953 +  -7.2  -3.06796   CCTTTAATACCGGAT                GGCG GCTG CGCC                 TTACCTGGCCTACGG  60 88
        rhaR 4154301 .. 4154311 +  -2.4  -3.19656   GGGTCAACGCCAAGC                 GCGG CAG CAGC                 TTCATGCATCGGTTT  43 446
CYD39_RS20240 4156246 .. 4156268 + -14.2  -5.82316   TATTTATTCCCTTTT           CCGGCTACTT TAT AGGTAGCCGG           TTTTTTTTACCTGGT 100 58
        sodA NONE
CYD39_RS20265 NONE
CYD39_RS20270 4161324 .. 4161349 + -13.3  -3.44381   GACGGCGAGATAAAA         AATCGGCCTGC ATTC GCAGGCCGATG          GTTTTTAGGTTCGCT 100 46
        cpxP 4164113 .. 4164131 + -14.6  -6.02914   CACCATCCCTGTCTT             CCCCCACA TGA TGTGGGGG             TTTTTTTTATCTCCA 100 65
CYD39_RS20290 4165215 .. 4165229 +  -2.9  -3.39432   GCAGGAAGGGATTGT               TATAC TATCT GTATA               TTCGTTGGATCGTTT  46 117
CYD39_RS20295 NONE
CYD39_RS20300 4167476 .. 4167500 + -15.1  -5.63517   TAAACCGTTTATAAA          CCCGGTAACGT ATT ATGTTACCGGG          TTTTTTCTTTGCCAC 100 38
CYD39_RS20305 4168355 .. 4168383 + -16.9  -2.72799   CATTATCTTATTGAT        TCTTATCCCGGTT TAA AACCGGGGTAAGA        TCGTGTCTATAAAAA 100 61
CYD39_RS20310 NONE
CYD39_RS20315 NONE
CYD39_RS20320 NONE
CYD39_RS20325 4172749 .. 4172762 +  -2.3  -3.66999   ATCCTGCGATAACCC               CACCA TATC TGGCG                TTTACCTGCCTGACT  49 53
CYD39_RS20330 4172988 .. 4173027 +  -2.7   -4.4891   GGGCGGGGATGCTGT  GATGTATCGCGCTGGCG GTGATA CGCCAAAGCGATGGCTC   TTTTGTCCTGCTGGC  63 24
CYD39_RS20335 4173290 .. 4173300 +  -3.2  -3.90729   GATTTAATAAACACG                 CCTT TCC AGGG                 TTTATCGCCGTTATT  54 179
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB NONE
        lsrF 4182019 .. 4182058 +  -2.8  -3.86571   AGGTTAAATGAGATC  G-CTTCCCCATCTTTTACC GAT GCGAGGAGATGGGGATGAC  TGTTATTTTATTTGG  54 34
        lsrG NONE
CYD39_RS20385 4183455 .. 4183488 + -11.7  -3.57263   GGTCACGGATGAATT     TGTGCACTGCCTGCG CCTG CGCAGGCGTTGCAGA      TTTACCGGTACCGAT  81 323
CYD39_RS20400 4185385 .. 4185411 + -12.3  -3.83409   GTAATGTTCAGCCGT         CATCTGCCCCG GTCGG CGGCGCAGATG         TTTAGTCATCTGTCG 100 156
        zapB 4190539 .. 4190554 + -11.8   -5.1675   ACAACGCATAAAAAA              GGCGCC TTAC GGCGCC               TTTTTTGATCACTCG 100 223
        rpmE 4198973 .. 4199002 + -12.3  -4.38712   AATAAGTTACCGCCA       GAAAAAAAGCGCC GCAG GGCGCTTTTTTTG        TTTTCTAGGGATAAC 100 36
        metB NONE
CYD39_RS20490 4206317 .. 4206330 +  -5.2  -3.08464   AAGTTCGTGAACGAA               GCGC CGGGTT GCGC                TTCGCTCCCTCATCA  51 48
CYD39_RS20510 4211359 .. 4211391 +  -4.9  -3.95036   TGCCGCGGCGTGACA      TGAAGAAAATTCATC TTT GCTGAATATTCCTCA      TTCTTTGGCGTGATT  61 65
        metF 4212411 .. 4212426 + -10.4   -4.1711   GGTTTATAACCTCCA              GCTCCC TGCC GGGAGC               TTTATTACAACTCAT  85 32
        katG 4214765 .. 4214796 + -15.2  -4.17491   TCTGATAGGTTAATT      CGTCAGCGGCTGCT ATTC GGTAGTCGCTGACG       TTTTCCGCGTTTAAT 100 41
        argC NONE
        argB 4226751 .. 4226762 +  -7.2  -3.30243   ATTTGTTCGCCCGAT                GGCG GCTG CGCC                 TTATCGGGCCTACGT  63 43
        argH 4228260 .. 4228287 +  -8.2  -5.00616   CTATCAGGTAATACT        GCCCGGCCGAGC ATCA GCGACGCCGGGC         TTTTTTACGCAAAAA  87 58
        oxyR 4229724 .. 4229745 +  -5.9   -3.5627   GCCGTTAACTGCTGC           TCGGTTTTG CCGA CAGAACTGA            TTTCCGGAATGGTAT  57 321
        fabR NONE
CYD39_RS20590 4232231 .. 4232284 + -10.3  -3.58343   GTGGATAAGCCTGCA CCATTTTTTCCGTTTCGCTGTCCAG ACCG CTGCGCGGCGGATCGACAAAAATGG TTTCGCACTGATAGC  74 236
        btuB NONE
        murI 4236543 .. 4236555 +  -4.9  -3.16068   TACGAAGTTTAATTC                TTTGA GCA TCAAA                CTTTTAAATTGAAGA  52 387
CYD39_RS20610 4238123 .. 4238136 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
CYD39_RS20615 4238282 .. 4238297 +  -7.6  -3.17075   GTTGTGGCAAAGCTC              GCATAC TTCA GTATGC               TTCGCTTCACCACGC  62 59
CYD39_RS20620 4238459 .. 4238492 +  -4.5  -4.49756   GTTTACGAAAAAATA     CTTCAGAGTGTACCT GAAA GGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  69 51
CYD39_RS20625 4241598 .. 4241609 +  -4.4  -2.78679   AGAACGTAAAAACGG                TCTG ATAA CAGA                 ATTTGCCTGGCGGCA  47 90
         rrf 4241742 .. 4241773 + -18.2  -4.63586   AGGCATCAAATTAAG      CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG       TTTTATCTGTAGTCT 100 37
        murB NONE
        birA 4243907 .. 4243924 +  -5.5  -5.57729   CCGAATAGTAAAAAA             AGGGAGT CGGT ACTCCCC              TTTTTTCTGTTATTT  93 33
CYD39_RS20655 NONE
CYD39_RS20660 4245510 .. 4245530 +  -2.5  -3.05816   GCTTACCGGCTCGAA            TAAAGAGAG TTT CTCTCGATA            TTCAGTGCAGAATGA  43 81
CYD39_RS20665 4245652 .. 4245662 +  -3.2  -2.56596   CCCGCTCCAAGATGT                 GCTG ATA TAGC                 TCAGTTGGTAGAGCG  42 32
CYD39_RS20670 4245778 .. 4245794 +  -4.3   -3.3071   TTAGCATTCAACAAG              TCGGGCG TGT TGCCTGG              TTGATGTGGTGATAT  52 76
         tuf 4247062 .. 4247079 + -11.3  -4.60924   CAATGCGCAATAAAA             GGGCATC ATTT GATGCCC              TTTTTGCACGCTTTC 100 60
        secE NONE
        nusG 4248227 .. 4248255 + -17.6  -5.35224   TTAATCGTTGCATAG        GGCGCGAAATTG ACATA CAATTTCGCGCC        TTTTGTTTTTATGGG 100 65
        rplK NONE
        rplA 4249494 .. 4249530 +  -6.6  -2.80513   TAAGATTAGTCTTTA   CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG    ATTCTGTTGAAATAT  55 38
        rplJ 4250391 .. 4250404 +  -8.1  -3.89695   GCGATGCAAAAGAAG               CTGCG TAAT CGCAG                TTGTCTTTATCAAGC  72 18
        rplL 4250870 .. 4250895 + -17.7  -4.64766   AGAAATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB 4255195 .. 4255224 + -13.6   -3.4252   TCGCTCAAACAGGTC       ACTGGTGTCGGG GTAAAA CCCGACACCAGA        TTGTGCTAACTCCGA 100 44
        rpoC 4259483 .. 4259514 +  -9.4  -2.65298   AACGAGTAATCGTTA      AATGGTGGAGGGGT ATTT ATCCCTCCACCAGC       ATTGTGCTGGATGCC  68 32
CYD39_RS20730 NONE
CYD39_RS20735 4261732 .. 4261755 +  -8.8  -4.67234   ACGGACATAAAAAAA          CGGGAGGTCG ATAA CAATCTCCCG           TTTTTCGCATTACGT  89 171
        nudC NONE
        hemE NONE
CYD39_RS20785 NONE
CYD39_RS20790 NONE
        hupA NONE
CYD39_RS20800 4272734 .. 4272749 +  -6.2  -3.72588   TGGCGGTCAGTAGCG              CGTTAT ATTC ATAACG               TTTAGATATCAGTTG  60 288
        zraS NONE
        zraR 4276259 .. 4276269 +  -2.4   -4.4648   TGAAGCGCGTTCGTC                 CCAC TCG GAGG                 TTTTCTCATCCAGCT  62 334
CYD39_RS20830 4281028 .. 4281041 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
CYD39_RS20835 4281204 .. 4281239 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
CYD39_RS20840 4284393 .. 4284405 +  -3.3  -3.05816   AGAGACGATTTTCAG                CACTG ATT CAGAG                TTGAGTACGCAATAA  45 56
         rrf 4284669 .. 4284710 + -20.3  -2.82015   CTGCCAGGCATCAAA CAAGTGAAGAAGCCCGTCC GTCT GGACGGGCTTCTTTGCGTG  TGTGGTAACTGTAAA 100 32
        metA 4286396 .. 4286411 + -10.4  -5.63517   CAGCATGTTGAATCA              GGCACC TTCG GGTGCC               TTTTTTATTTCCGAA 100 71
        aceB NONE
        aceA NONE
        aceK 4291907 .. 4291923 +  -6.5  -3.17527   CGGAAATAGAGAGGG              CCGCAAA CGG TTCGCGG              TGTTCGTCATAAATA  56 523
        metH 4296607 .. 4296642 +  -8.5  -4.20516   GATGTGGATTAATAC   CACTGACAGGGCGTT-TG CTG CAGAACGCCCTG-C-GTG   TTTATTGGGTGAACA  80 29
CYD39_RS20890 NONE
CYD39_RS20895 4297883 .. 4297897 +  -2.1  -2.76721   TGAATATTGTAAGGC               TGGAG GGGGA CTTCA               TAGTTAACCTTGTCT  40 368
CYD39_RS20900 4298317 .. 4298328 +  -5.8  -2.73203   GAGGGAAAAGCTATT                GGCA GTAA TGCC                 CTTCGTTATTCATGA  50 18
CYD39_RS20905 4300153 .. 4300204 + -16.8  -3.12351   GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG TGTAGGC-CCGCCATTCGGCA TTCAATGTGGCCAGG 100 32
CYD39_RS20915 4301064 .. 4301079 +  -3.2  -2.78463   TGCCATCTGGTATCG              CCTGAA AAAT TACAGG               TATAATCCGCAAAAT  43 5
CYD39_RS20920 NONE
        rluF 4302964 .. 4302982 +    -6  -3.53224   CCTTTGCCGTTTCGC             CCGATTTT TCA ACAATCGG             TTTCCCGGACCAGTA  60 415
CYD39_RS21065 4324638 .. 4324655 +  -4.7  -3.10796   CGGATAAGGCGCCTG             CGTCGCC ATCC GGCAGCG              TATTGCCTGATAGCG  49 98
CYD39_RS21075 4328139 .. 4328156 +    -7    -5.626   TAAGATAATAAAAAG             GCCGAT ATTCAC ATCGGC              TTTTTTTATAAGATA 100 125
CYD39_RS21080 4328744 .. 4328765 + -11.7  -4.13014   CGGTACGTTTAACCA           TAACCACAC TCCG GTGTGGTTA            TTTTGCCCCTCTGGA  93 44
CYD39_RS21085 NONE
CYD39_RS21090 NONE
CYD39_RS21095 4332346 .. 4332360 +  -2.1  -3.28924   AAAAATATAGATGCC              CGTCAC ATTT GTG-CG               TTATACAGAAACCTC  45 114
        psiE 4332942 .. 4332961 +  -5.6  -2.75183   GTTGAGGGCAGTGGC            ATTGCCCG TTGC CGGGCAGG             TACTTCGATAAAACT  50 157
        malK NONE
CYD39_RS21125 4339753 .. 4339764 +  -7.2  -2.57581   GAATAAGGCGCCAGC                CGCC ATTC GGCG                 ATATGTTTGGGTTGG  57 113
        malM 4340780 .. 4340799 + -11.4  -5.75599   GATTTTGCAGCAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTGTCATTTC 100 59
        ubiC NONE
CYD39_RS21140 4342368 .. 4342394 +  -7.3  -3.54543   ATACGTCATATCAGT        TGCCCGATAAGC TTAC GCC-ATCGGGCA         TTTCAGGCACTGGCT  65 83
CYD39_RS21150 4345410 .. 4345425 +    -4  -2.84839   TTTTTTGCGCCGTTT              GTGGTT CCAA AATCAC               CTTTAACTGTATATA  46 67
        lexA 4346125 .. 4346146 +  -5.1  -3.30124   CGTCATCCGGCAATC           GTGCAGC-CT GAT GGCGCTGCGC           TTATCAGGCCTACGG  54 65
        dinF NONE
CYD39_RS21165 NONE
CYD39_RS21170 4348300 .. 4348310 +  -6.8  -3.85698   ACCACATAACTATTG                 GTGG ATT CCAC                 TTTATGGACAAAACC  65 395
CYD39_RS21180 4350112 .. 4350132 + -18.3  -3.70068   TCTGAGGTGCTTTCA            CCGGAGGCG CTA CGCCTCCGG            TTTAGCGTTATGCTA 100 36
        dusA 4351218 .. 4351241 +  -4.5  -5.07523   TAGTCAATCTCACCA          CGCTCTGTG CGGTCT TGCAGGGCG           TTTTCTTTATATATC  77 56
        pspG 4351733 .. 4351753 + -12.6  -2.54371   GAACAAAAAAAGAAA            GGGCTTCC CGGGT GGAAGCCC            AATTTCTTTGCAGAG  81 161
CYD39_RS21200 NONE
         alr 4355358 .. 4355384 +  -8.7    -3.494   TTAAATACGCGGCGG        GCCGGGT-GGCG CTTG CGCTTATCCGGC         TTGTATCGCGCATTG  71 37
CYD39_RS21210 4356722 .. 4356772 +  -9.6  -3.29541   ATTTGCCGCTGTCAT GTAATATTCAGGCCGGACGGCGAT AAC AGTGCCCTCCGGCCTGACAATAGC TGTTGTGATCATCCT  74 22
CYD39_RS21215 4357632 .. 4357650 + -10.3  -5.13521   GAGTACTAAAAATCA             GGAGAGC GACAG GCTCTCC             TTTTTTGCATGATTT  93 32
CYD39_RS21220 NONE
CYD39_RS21225 4358740 .. 4358757 +  -7.7  -3.70104   CGCGGCGGACTCGCG             GATAGCG TCGT CGCTGTC              TTCTCTTGCCTGCTT  65 236
CYD39_RS21245 4363106 .. 4363125 + -12.2  -4.69053   TCTCGTCTGCTGAAA            TGCCTGGT GTAA ACCAGGCA             TTTTCTTACCTGGTA 100 86
CYD39_RS21255 NONE
CYD39_RS21260 NONE
CYD39_RS21265 NONE
CYD39_RS21270 NONE
CYD39_RS21275 4385395 .. 4385418 + -12.4  -4.00868   CGCATAATAACGGAG          GCCCCTCACC TTTG GGTGAGGGGG           TTTACTTATGGATAA 100 34
CYD39_RS21280 4387542 .. 4387562 + -11.2  -5.75599   CTGCTTAATAAAAAA            GACCCGTT GCACA AACGGGTC            TTTTTTTGTCATTTA 100 75
CYD39_RS21290 4390362 .. 4390377 +  -6.1  -2.87769   ACAGGAGACGGCGCT              GGCGA ATATAC TCGCC               TAATGTTTGATGCGT  51 171
        soxR 4391108 .. 4391133 + -13.4   -4.4572   TGAGTTCACCTAAAA         CTAAAGCGCC GCTAAG GGCGCTTTAG          TTTGTTTCCGGTCTT 100 61
CYD39_RS21305 4392126 .. 4392136 +  -3.2   -4.1711   GATAACGTTTGCGCA                 TCGT CTG GCGA                 TTTATTGAGCATACT  60 118
CYD39_RS21310 4393744 .. 4393776 + -13.6  -4.07885   GCTCTGCCTTCATTC     TGAAAAACGGGCGGC GTTG GTCGCCCGTTTT-CA      TTTTCAGGACACATC 100 40
CYD39_RS21315 4395502 .. 4395528 +  -9.5  -3.29511   CTGGATTTGATGGAA         GCGCTACTGAT AGAAA ATCAGTAGCCC         TTGTGGCCCGGTGGC  74 2
CYD39_RS21325 NONE
CYD39_RS21330 4397699 .. 4397741 +  -5.7  -3.14132   TGGCGAGGGTGATGT TCTGA-T-TTTCCTCCGACCC ACG GGGCCGGAGGAAACGGTAAGA TTAATGCGCACGCCC  54 21
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
       nrfEF NONE
        nrfG 4408925 .. 4408945 +  -5.5   -3.6502   CTCAGTGTATTATTC            GTTTTTGAC GAA GTAAAAAAC            TTTCCATAACAAATA  59 118
        gltP 4410494 .. 4410519 +  -8.3  -2.72471   GCCCAATAACGGATT         GCCGGAT-GGCG CTT TGCTTATCCGGC         CTTGTATCCTGAACA  64 32
CYD39_RS21385 4411767 .. 4411813 +  -7.8  -2.57931   GCCGGATAAGGCGTT CACGCCGCCATCCGACAACCTG CTC CGGGTTGCCTGATGGCGCTACG CTTATCAGGCCTACA  59 77
CYD39_RS21420 4419854 .. 4419868 +  -2.9  -2.87344   GAATAAATTTCGCGC               TTAAG GTTCG CTTAA               TCTCTCGCGGGCATA  42 35
        pmrR 4420033 .. 4420048 +    -9  -3.96483   TTTTTCAACAGCACC              CAGGCA CGGG TGCCTG               TTCTTTCCGTACGGT  79 55
        melA 4431136 .. 4431156 +  -6.1  -3.64599   GTTAATCTCCAGCCG            CGCTGGA CGGCAGA TCCGGCG            TTTAACCTCTACTAA  62 36
        melB 4432723 .. 4432736 +  -3.7  -3.91488   CGGCCCGGGAGAACG               CCGGG CCTG CCAGG                TTATTTCGCGCAGTT  57 109
CYD39_RS21500 NONE
        dmsB 4442327 .. 4442337 +  -3.2  -2.53382   TGAACATTCGGGAGG                 TGCG CCA TGCA                 TGAGTTACCGCTGGT  42 12
CYD39_RS21510 4443095 .. 4443106 +  -2.2  -5.03747   TACAATCTGTGGACG                CTGC CAAT GTAG                 TTTTTTGCCCGGTTT  71 14
CYD39_RS21515 4443823 .. 4443851 + -12.5  -3.92592   TACTTGTGCCGCCAT       C-GTGCCCGCTG TTGCGT CAGCGGGCACAG        TTTACTATTACAGCT 100 73
CYD39_RS21525 4446637 .. 4446656 + -10.7  -5.97575   GTCCTCCTCATATTT            GCGGCAG CGTAGT CTGCCGC             TTTTTTTTATAAATT 100 194
CYD39_RS21560 NONE
CYD39_RS21565 4451312 .. 4451330 +  -3.1  -5.42862   ATGAGTGATAAAAAA             GAGACTG AAATC TGGTCTC             TTTTTTTGAGCCTGT  81 53
CYD39_RS21585 NONE
CYD39_RS21590 NONE
CYD39_RS21595 NONE
CYD39_RS21600 4457568 .. 4457587 + -12.2  -2.87132   TGATTACTACTAATA            CTAGTGCC TGCG GGCACTAG             TCTCTGAGGAAAAAA  80 42
CYD39_RS21605 NONE
CYD39_RS21610 NONE
CYD39_RS21615 NONE
CYD39_RS21620 4460973 .. 4461002 + -12.9  -3.03169   GCTGGCATAAGGCTC       TAACAGGCGTTGG CATC CCGACGCCTGATA        ATCTTTTTACTCTTT  86 31
        fxsA 4471282 .. 4471323 +  -5.2  -2.77861   TGCTGGCCGGATAAG TCGCGTGAGGCGTTATCCG GCCAA CAGATA-CGTCTTACGCCA TGCGTTTTCGCTTCG  49 50
CYD39_RS21680 NONE
        groL 4474944 .. 4474979 + -18.4  -4.37971   TTATCTCCCAGAATT    GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC     TTTTAGTCATCTTTT 100 153
CYD39_RS21690 4475418 .. 4475448 +   -17  -2.79809   GATATGTCTGAATCG       TAACGCCCTCTGAA AGA TTCAGAGGGCGATA       TGGTTAGCGTTTTTC 100 39
         efp 4478246 .. 4478267 + -12.3  -3.01831   CGTTATCGGGAAAAA           TGGTGCAGC GTAT GCTGCGCCA            TCCTATTTTTCGCGC  83 45
CYD39_RS21710 NONE
        ecnB 4478676 .. 4478713 +  -8.6  -4.36914   AGAGCTCAGCAGTAA   TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA   TTTTCTCCGGAAGCA  84 26
CYD39_RS21725 4479950 .. 4479961 +  -5.8  -4.93877   CCGGGTCGCGACGGC                CAGC ATTT GCTG                 TTTTATTTCCTCAGA  83 108
        epmA 4485153 .. 4485169 +  -9.4  -4.43221   TTTCGCGAGATAAAA              TGGCGC AATAA GCGCCA              TTTTGTAGCATATTT  86 56
        yjeM NONE
CYD39_RS21765 4487293 .. 4487308 +    -6  -4.09685   TGCGTTTACAAACTG              CCCGCC GGGC GGCTGG               TTTTACCCGCTGACG  68 102
CYD39_RS21785 4493732 .. 4493753 +  -4.4  -3.96624   GATAGCTGTCATAGG           CGACAGGC GTGATA GCTTGTTG            TTTATCCTGCAAATA  60 365
CYD39_RS21795 NONE
CYD39_RS21800 NONE
CYD39_RS21805 4495322 .. 4495337 +  -4.6  -3.14132   CTTGCGGCTTTCCAG              CGCCGT AATG ACGGCA               TTACTCCACGGCGCA  50 457
CYD39_RS21815 NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 4502835 .. 4502869 +  -7.2   -3.6279   TCACGCGCTGTTTAT    CCATGTCGGGGGCG TCGGATAAT CGCCCCCG-C-TGG    TTATTAAGAGGGTTT  67 43
        hflX NONE
        hflK NONE
        hflC 4506676 .. 4506711 + -14.2  -4.37092   GCGGTTTTAGACCAG    CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC    TTTTATAAGGGCGAT 100 51
CYD39_RS21860 NONE
        purA 4508467 .. 4508479 +  -5.5  -2.98447   AATAAATTAGCGACA                CAGCT TGT GGCTG                GTTTATCATCAATAC  51 165
CYD39_RS21870 NONE
CYD39_RS21875 4511443 .. 4511463 +  -5.4  -2.64877   GCAGAGTGAGCAATA            CCCTCTTC AAACA GAAGAGCG            TGAATTATCTGTAGG  50 32
        rlmB 4512285 .. 4512302 +    -7  -6.32216   TTTTTTAAGAAAAAA             CCATCC ATAATC GGATGG              TTTTTTTTTATCTCT 100 52
CYD39_RS21885 NONE
CYD39_RS21890 4513590 .. 4513600 +  -6.8  -4.33417   GGGCCTGTTTATCGG                 GCAG TAT CTGC                 TTTGTTATCGGTAGC  74 108
CYD39_RS21895 NONE
CYD39_RS21900 NONE
CYD39_RS21905 NONE
CYD39_RS21910 NONE
CYD39_RS21915 4518511 .. 4518525 +  -6.4    -3.737   AGGGCGATAATCCGC               TCCACA TCC TGTGGG               TTTCCTGCAACATTA  60 185
CYD39_RS21930 4520101 .. 4520121 +  -3.9  -4.60487   TGGGCTTCAAGCTGT            TGCAAAACC TGC GGATTGGCA            TTTTTGCCGGTAATC  69 62
        ulaA 4523737 .. 4523751 +  -2.8  -4.48987   AACTGGCAGAACAGT               CTGCTT AAT AAGGAG               TTTTGATTATGACCG  63 18
        ulaB NONE
        ulaC NONE
        ulaD NONE
CYD39_RS21965 NONE
CYD39_RS21970 4526774 .. 4526784 +  -6.8  -2.93901   CGCTCCGGGATCCTA                 TCCC TCA GGGA                 TGTAATTGGTCAGAT  56 46
CYD39_RS21975 4527740 .. 4527769 +  -4.1    -5.252   CATAGTGACCTCCTC       GGCGGCGGTTGCTG ACC CGGCC-CTGCCTCC       TTTTTTGTGAACCTC  79 367
        rpsF NONE
        priB NONE
        rpsR 4529065 .. 4529075 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI 4529580 .. 4529608 + -13.2  -3.60316   CGTTTTTGCTAGCAA        CGAAACGTCGGC CCAGC GCCGGCGTTTTG        CTTTTTTAACCCCAT 100 52
CYD39_RS22005 4530967 .. 4530980 +  -5.9  -3.32865   TATCCTGCTGGAAAG               GCTGC GTCT GCGGC                TGGTTTTGTTCTTCC  56 365
CYD39_RS22015 4532161 .. 4532201 +   -17  -2.52676   TCTCTAAGCGCCCCG GGTTTGCCGGATGACGGCG TAAA CGCC-TTATCCGGCAATCC  TGACTTCAGCAGATG 100 34
        cycA 4533940 .. 4533967 +   -12  -2.76696   GGCGCAGTTTACAGC        CGCCATCC-GGCA AAA TGCCCGGCTGGCG        ATTATTCCCCGGCCA  79 108
CYD39_RS22040 4537312 .. 4537328 +  -5.8  -3.78934   CCGTATCGCTGTGGA              TTGGCG CCAGA CGCCAG              TTATTATCCGCCGCC  63 235
        cysQ 4540213 .. 4540223 +  -2.4  -4.32402   TCAAGCACGATGACG                 GCGG ACC CCTC                 TTCTTTTAATTGCCA  60 127
CYD39_RS22060 4541232 .. 4541252 + -16.9  -3.50335   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGAGCCG            TTGATGTTTCTGGCA 100 66
        tamA 4545366 .. 4545376 +  -4.6  -2.62316   TTACAGTTTTATATC                 GGTC TGG GGCC                 TGAATTATGAGTTTA  46 5
        tamB NONE
CYD39_RS22085 4549516 .. 4549538 +  -9.9   -5.1925   CAGCCCTGAACTGAA          CA-CGCCACC CTCG GGTGGCGTTG           TTTTTTACATTCTGG 100 32
         mpl 4555664 .. 4555685 + -15.9  -4.52857   AAATGACTATGCGGT           CAGCCAGCC TTGT GGCTGGCTG            TTTTATATGGGGCAT 100 39
        iolR 4556983 .. 4557011 + -15.4  -2.64595   GGAGTAAAAAAACAA        GCCGATGATCGT ATTTA GCGATCATCGGC        ATTGTGGTGAAACTT  93 34
       iolT2 4560370 .. 4560397 + -17.2  -2.71263   ACCTCTCCAATATTA        GCGGAGAATATC CAGA GATATTCTCCGC         TGGTTACACAACCTT 100 42
        reiD 4564339 .. 4564358 +   -10  -5.38958   TAATCGTCATGAGAA            TGGTCGCA ATAC TGCGGCCA             TTTTTATTTGTCGGT 100 55
        iolE NONE
       iolG1 NONE
        srfJ NONE
       iolI1 4569120 .. 4569153 +  -3.7  -2.71712   ACCAGTAGTGAAAAG     GTTGCGACCGTGGCG CCGC CGTAACGGTCGGGAA      ATTTGGCGCAGAAAA  43 353
        iolD 4574414 .. 4574441 +    -2  -5.10163   ACGGCAAAATAAAAC        G-ATCCGTTTTTC GCA GAACTACGGATGC        TTTTCTTTTGCGGTT  71 129
       iolG2 4575537 .. 4575562 +  -8.3  -4.52589   GTTAATAATGAATAA         ACTCTCGCACT GAAA AGTGTGAGAGC          TTTTCTATACCGAGG  87 49
CYD39_RS22195 4576869 .. 4576897 +  -7.6  -5.03314   CATCACTAAATTAAA       CCGGTTTTTATCA AGAT TGATAAA-GCCGG        TTTTTTCACCCTACG  86 82
       iolI2 4577766 .. 4577794 +    -9  -2.91695   AACAAATTAATCGCA       GC-GTGTCATTGC TGTT GCAATGATACAGC        TAATTTCCAGGTGAC  67 3
        iolH 4578747 .. 4578767 +   -14  -3.91488   GTGGATTTGCCTGTA            CCGCGCCA CAGGC TGGCGCGG            TTATTTGCGGCAATT 100 47
        pmbA 4580793 .. 4580829 +    -8  -3.65201   TAATACCCGTCATAC   TTCAGGCTGCAGGC-GC ATTG GCTGCCTGCAACTCGAA    TTATTCAGGGTATTA  69 38
        cybC 4581267 .. 4581316 +  -6.5  -2.79183   AAAAGTATCGTTAAT CTTTGTGGGATGGCGGCTTCGC TTTATCC GC-AGGTCGCCATCCGGCAAAC TGTAATACCCATCAC  53 27
CYD39_RS22225 NONE
CYD39_RS22230 NONE
CYD39_RS22235 4582543 .. 4582556 +  -3.1  -5.06414   ACAGGGTGGATTTCG               TC-GCG AAA CGCTGA               TTTTTATTAAAAAGG  74 12
CYD39_RS22240 NONE
CYD39_RS22245 NONE
CYD39_RS22250 NONE
CYD39_RS22255 NONE
CYD39_RS22260 NONE
CYD39_RS22265 4589267 .. 4589285 +  -4.4  -4.59773   TGCATCGACCAGTTG             GGCATGGC GCG GCGAGGCC             TTTTTGCCCGTACAG  71 320
        mgtL 4597513 .. 4597542 + -12.1  -2.87564   GAGAATTTTCCTTTT       CCGGTAAGCCTGC CTCT GCTGTCTTACCGG        TGTGTAAGACAGTGA  80 19
        mgtA 4600756 .. 4600768 +  -2.7  -4.45544   AGACTATCTTCGCGG                TAGAT TCT ATCTG                TTTTAATTCCTGGCG  64 413
CYD39_RS22340 4603370 .. 4603386 +  -3.8  -4.48221   AAGGACGCCGCTGGG              GATTTA CGGAA TAAATC              TTTTGTCCCTTCGTA  66 261
CYD39_RS22370 4610087 .. 4610097 +  -4.6  -4.41633   CTTCGGTCAGGGTGA                 TGGC GCC GCCG                 TTCTTTTTCGCCATG  68 467
        rraB NONE
        miaE 4612234 .. 4612245 +    -3   -3.4619   GGCGAGCAGGAAAGG                TCAT TTTC ATGA                 TATTCTGTTCTGAGT  48 130
CYD39_RS22400 4615252 .. 4615269 +  -5.5   -3.9712   GCCGTCGATGATTTT             GGTCACGG AAA CCG-GGCC             TTTGTCATCAGCTGG  63 422
        lptF NONE
        lptG 4622650 .. 4622660 +  -2.4  -4.18762   GTAGCGCGTAACCTG                 ACGC GTG GCGC                 TTTTGGCTACCCGTT  57 156
        idnK 4628077 .. 4628094 +  -5.5  -4.14392   GTTAATAATGAGATC             GAACTGG CCCG CCAGTGC              TTTTAACGCTTCCGG  65 377
CYD39_RS22460 NONE
CYD39_RS22465 NONE
CYD39_RS22470 4631245 .. 4631261 +  -3.7  -2.87136   AAGGGGCTATAGGGG              GTAATAC AGT GTAATAC              TGTGGTAATTCCTGA  46 95
CYD39_RS22475 NONE
CYD39_RS22480 NONE
CYD39_RS22485 NONE
CYD39_RS22490 NONE
CYD39_RS22495 NONE
CYD39_RS22500 4636239 .. 4636278 + -13.7  -3.68073   CTTCTGAAATAGTGA  GGTGGAACAGGTGGAACG CCAGC CGATCCGC-TGTTCCACC  TTGTTACCTGCGATG 100 125
CYD39_RS22505 NONE
CYD39_RS22510 4637595 .. 4637613 + -10.3  -5.35222   AGAACGCCCACGCAA             TCCCGGT CCAGT ACCGGGA             TTTTTTATACCTTTT 100 47
CYD39_RS22515 NONE
CYD39_RS22520 4638274 .. 4638294 + -13.3  -4.68593   TGATGGTTGATGATT            TGGTGGCGG ATA TCGCCACCA            TTTTTCACTGGTCGC 100 38
CYD39_RS22525 NONE
CYD39_RS22530 4641066 .. 4641104 + -14.6   -4.1897   GTTGAGGAAATGATT   GTTTCGGTTAGGGTCCGT GCT GCGGATCCGAACCGAATC   TTTCTCTATATCGTT 100 70
CYD39_RS22540 4642642 .. 4642664 +  -7.1  -2.72263   ACTCTCCATACTAGA           TACATGTGT TTATT ACACGTGTA           ATTTCAGGAGGCTCT  58 96
CYD39_RS22545 4642920 .. 4642934 +  -2.1  -3.87815   TACAGGACGTTTTAA               TCATG CAATA CATGG               TTTATCGCAATAAAG  53 26
CYD39_RS22550 4643529 .. 4643542 +  -5.2  -6.04953   GGCAACTACAAAATG               GCCG CATCTC CGGC                TTTTTTTGTTTATAT 100 324
CYD39_RS22555 4644982 .. 4644994 +  -4.7  -3.02745   GCGTCACCTTAATAT                CGCGG TGG CCGAG                TAGTTTCTGCGTGAC  47 142
CYD39_RS22585 NONE
CYD39_RS22590 NONE
CYD39_RS22595 4654501 .. 4654518 +  -6.3  -4.46254   AACCTTAGGTATGAA             GGTGAAT TAAT GTTCACC              TTTATTCTCTGTTAA  76 49
CYD39_RS22605 4656296 .. 4656309 +  -2.4  -4.07568   AACCGTTTTCTTATA               TCTC GGTTAA GAGA                TTTTCGCGGGCCAGG  55 316
CYD39_RS22615 4657346 .. 4657363 +  -7.1  -3.18199   ACATCTTTTCTTCAG             GTTTTTC GCGC GAAAAAC              TTGAATTAAGGATTG  62 64
CYD39_RS22620 NONE
CYD39_RS22625 4659293 .. 4659309 +    -3  -4.88895   TTGTGCTTACAGGGA              TATCGC TTGAT GTGATA              TTTGTTTGTTTCTTT  70 95
CYD39_RS22630 4660703 .. 4660721 +  -5.9  -3.45764   CACTACTGTGTTGCT             GGCTTGC CCTAT GCATGCC             TTCGTACTTTTTTCT  57 204
CYD39_RS22635 4661951 .. 4661974 +  -4.6  -3.61654   ATACTGGTAGTTTTG          GTTGTAACTT ATTT AAGCTACAGC           TTTAGGCTAGATATA  55 67
CYD39_RS22640 4662449 .. 4662475 + -11.8  -3.95022   TATGCGCTGTAATTA         TAAAAGCGTATT TAT GATACGCTTTTA         TTTACTCTTAATGGA  93 41
CYD39_RS22650 NONE
CYD39_RS22655 NONE
CYD39_RS22660 NONE
CYD39_RS22665 4671228 .. 4671252 + -12.9   -2.9175   CATTGTATTTGAAGG          TCGGGAGGAGG TTA TTTCCTCCCGA          TATCCTTCCAGTATA  86 61
        fosA 4673258 .. 4673273 +  -3.2   -5.4251   AGGAGCATGTAAATG              GACCTC AACT GAGATC               TTTTTTATGTCTAAA  81 174
CYD39_RS22680 4674769 .. 4674811 + -15.3  -2.74514   TTTATAACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC  93 457
CYD39_RS22700 4679383 .. 4679402 +  -2.8  -5.47159   TGAATTAGAGTAATG            TAGCGCTA TTCA TAGCGTAA             TTTTTTCTGTTGCGG  83 328
CYD39_RS22705 4680397 .. 4680427 +  -8.3  -5.55664   TTATTTAAATTTGTT       CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG       TTTTTTTAGTGATGA 100 79
CYD39_RS22710 4681166 .. 4681179 +  -3.7  -4.10925   CGTACATTTTACACT               GCACC CGGG GGCGC                TTTTCCAGCGTCTGT  60 182
        uxuR 4682830 .. 4682850 +  -8.9   -4.4773   TTATACCTGGAATAG            CGTGGGCAG ACC CAGTCCACG            TTTTACTTCCTGTAG  88 41
CYD39_RS22730 4685259 .. 4685280 +  -3.1  -3.92522   ACGGCATTTTTTATA           TACAC-ATCA AGT TGATAGTGTG           TTTCTGACCTTGACG  55 208
CYD39_RS22735 4686480 .. 4686490 +  -3.2  -4.32034   TATTATCAAACGGCG                 CTTG TTG CAGG                 TTTTCATCGTGATAA  62 456
CYD39_RS22775 4695741 .. 4695765 + -11.3  -3.04589   GTCTGAATGTTGCAG          GCCCGGTGCCC GCC GGGCAACGCGC          TCTATAATTATCGTT  79 51
CYD39_RS22780 4697389 .. 4697401 +  -4.8  -4.26344   TTATTTATCCACGTT                GCAC TAACC GTGC                TTTTGATCCCGATAT  66 148
CYD39_RS22790 4697952 .. 4697963 +  -5.8  -3.60296   GCGGAAGGCGTCATA                GAGC TTAA GCTC                 TTTAAACTGAACCTC  57 342
CYD39_RS22825 4706117 .. 4706127 +  -6.8   -4.2461   CTTCGCTTATCAGGC                 CTGG GCG CCAG                 TTTATTGATAAAGGT  72 114
CYD39_RS22860 NONE
        bglJ 4714289 .. 4714301 +  -6.9  -3.53012   GCTTCTTATTATCCA                GGCGG GCA TCGCC                TTTCGCGACCACCAG  60 339
CYD39_RS22885 4717504 .. 4717517 +  -3.9  -3.37522   TCTAGTGGTTTTCAG               CTATT CGTC AATAG                TTAATTGCATGGGAT  50 434
CYD39_RS22910 NONE
        rimI NONE
CYD39_RS22920 4720270 .. 4720280 +  -6.8   -2.8805   GTCATTAAGCGAACT                 GGAG CAG CTCC                 TGTGTAAACACTGAT  56 1
        prfC 4721986 .. 4722005 + -16.4  -3.33483   ACTGATCCCTTTCCG            GGCGCGGC ATCC GCCGCGCC             TTCGTACTTTCCCTG 100 36
        osmY 4723007 .. 4723033 + -14.5  -2.62184   TAATTCGTCGTAATT        CGTCCTCCCGAC GTTT GTCGGGAGG-CG         TAATGTGCACCACAC  87 38
CYD39_RS22935 4723315 .. 4723333 + -14.6  -4.28049   ATATATTGCTATCAA             GCCAGTCC AGC GGACTGGC             TTTTACGGTTTTAGC 100 56
CYD39_RS22940 NONE
CYD39_RS22945 4725371 .. 4725382 +  -5.8  -3.75629   CTCTTGCGGCGTCGC                GCCT GGCC AGGC                 TTTCGCTTCGCCATA  61 145
        deoC 4728696 .. 4728714 +  -3.9  -2.73124   CGACGGTAAGAGCGC            CAGCAGCT ACTA AGCT-CTG             ATTTGCCGGATGGCG  45 13
        deoA 4730163 .. 4730173 +    -4  -3.23855   TGAATAGTTGTATAC                 TGAT CTG ATCA                 ATTATTTTTGAAGCA  48 34
        deoB NONE
        deoD 4732362 .. 4732394 + -12.1  -4.49556   GATAAAGAGTAAGAT     TG-TGAAGGGGGCC AGAGCA GGCCCCCTTCATCG      TTTATTTCGTCAGCA 100 29
CYD39_RS23015 NONE
        radA 4742195 .. 4742207 +  -5.5  -3.30124   AATTTGCCGGATGGC                GATGC AAT GCGTC                TTATCCGGCCTACGG  56 66
        nadR 4743609 .. 4743653 +  -5.6  -4.42806   GTACTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACA TTTATTTGGCAATAC  70 97
        sltY NONE
        trpR 4748009 .. 4748028 +  -2.1  -4.08767   ATCACCGCCTGGTAG            TAAACGC TGGAGC GCGTTAA             TTTTCCGGCGGTAAA  56 182
        gpmB 4749436 .. 4749446 +    -4  -3.23692   TGCGGCAGTGCGGTG                 GTAT AGA ATAC                 TTCCTGCTCATCGTC  47 296
        creA NONE
        creB NONE
        creC NONE
        creD 4754351 .. 4754371 +  -5.3  -4.46212   TGGCATTCGCTTGCC            CGGCCGTTA CCG TGGCGGCGG            TTTTATAGTAGCGCG  70 127
CYD39_RS23120 4762915 .. 4762927 +  -3.4  -3.73968   GATGAAATCATCGTA                GCTA AATGC TAGC                TTTCATCACAAATTT  53 122
CYD39_RS23125 NONE
        arcA 4761812 .. 4761838 - -13.1  -4.38927   GGGGGACATAAGAAA         CAGCCAGTAAG AATAA CTTACCGGCTG         TTTTTACGGTTCGGC 100 53
CYD39_RS23110 4761213 .. 4761258 -  -8.9  -4.70046   GAGAAAAGTACAAAA TGCAGGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGGAA CTCCTCCCGGCGGGA  90 52
CYD39_RS23105 4759943 .. 4759959 -  -5.3  -4.56358   GATAGCCATATAAAA              TAAAATA TTA TATTTTA              CTCTGTATGCGCTTC  71 295
CYD39_RS23100 NONE
CYD39_RS23095 4758598 .. 4758614 -  -5.8  -2.59742   GTTAATGGCTAGAAT              GAACCG GAATG CGGCTC              TAAACTCATCCCATA  50 2
CYD39_RS23090 4756009 .. 4756025 -  -2.1  -2.64747   TTATCCCACCAGAAT              CACTGGC ATT GCTCGTG              TAAGATTTCTACGCC  39 8
CYD39_RS23085 4755401 .. 4755417 -  -2.2  -2.65504   TTCTCATGAAAAATT              CCTGCT TTTAT ACCAGG              TGAAATAGAAAGATG  39 41
CYD39_RS23080 4754256 .. 4754292 -  -8.6  -3.41807   TGGAAATAAATCTAA   CGGGCGC-GCGCGTTAA CGTT TTCCCGCGCAGCGCCAG    AAACTGTGATGCCGT  69 40
        robA 4748698 .. 4748728 -    -6  -4.37886   TTAGGCCGCACAAAA       CGCACGGCGGAG ATTATCG CCCAGGCGTGCG       GGTGTGATATCACCT  73 459
        yjjX 4747873 .. 4747900 -    -9  -3.30124   TCGTAGGCCGGATAA        GGCGAAGCGGCC ATCT GGCAACATCGCC         GCGAAATTCCTGATG  71 79
        ettA 4743546 .. 4743578 -   -12  -2.74443   GGGATAAGAACCAAT      GCCTGATGCGACGC TTACC GCGTCTTATCAGGC      CTACAGTTTCACAAC  79 102
CYD39_RS23010 NONE
        lplA 4737713 .. 4737740 -  -4.2  -5.06414   CTTGGTTAAGAAAAA        CTTTAATCATCA TTGG TGATGATAAATG         GTTTATAATTCGCTG  76 194
CYD39_RS23000 NONE
CYD39_RS22995 NONE
CYD39_RS22990 NONE
CYD39_RS22985 NONE
CYD39_RS22980 4732362 .. 4732393 - -10.1  -2.58491   GATAAAGAGTAAGAT      TGTGAAGGGGGCC AGAGCA GGCCCCCTTCATC       GTTTATTTCGTCAGC  70 28
CYD39_RS22955 NONE
        yjjW 4724895 .. 4724918 -  -3.8  -3.97947   CGCACGCATGACAAA          CTGGCGAT GCACTTAA AGCGCCAG           GATCTACCGCGAACC  58 391
        rsmC 4717577 .. 4717589 -  -9.1  -3.30243   ACGTAGGTTGGATAA                GACGC CTG GCGTC                GCCATCCGGCACATG  71 72
CYD39_RS22900 NONE
CYD39_RS22895 NONE
CYD39_RS22890 4716812 .. 4716822 -    -4  -4.64846   TGACAAATGAGAAAA                 CATA TCA TATG                 ATATTGGTTATCATT  69 330
CYD39_RS22880 4715468 .. 4715485 -  -2.7  -2.54955   ATAATTATTACTAAT             CCTATCG ATAG CGATAAA              CGATGGCAAGCGGTT  40 84
        fhuF NONE
CYD39_RS22870 4713505 .. 4713531 -  -6.4  -3.28745   GCGTTAAGAACTGAA         CGCCGGACAGGA TTA TCCAGCCTGACG         GAACTGGCGATAAAT  59 520
CYD39_RS22855 NONE
CYD39_RS22850 4710646 .. 4710659 -  -3.7  -2.85545   CCTGTAAGAACAGCA               GGAGG CGTT CCACC                GATCACACGCGGGGG  46 28
        dnaT NONE
        dnaC NONE
CYD39_RS22835 4708550 .. 4708564 -  -4.2  -3.20751   TCTAACAATGTAATA               GCGATG TCA CATTGC               TGCAATTCTAATAAC  48 232
        opgB 4706045 .. 4706072 -  -7.6  -3.04144   GGCGTATGGTGAACA        GTCGGCCTACAG ACGA CCGTAGGCCGGA         TGAGATGTTCACACT  60 150
        btsT 4701780 .. 4701808 -  -7.5   -4.3255   CTGTTAATGAATAAA       GCCGGAT--GGCG GCTTG CGCCTTATCCGGC       CTACACTAGCCGGGA  77 67
CYD39_RS22815 4701556 .. 4701576 -  -3.2  -3.14344   TAGTCTCTCCATTAA            CAACAGCG CATAC CGCCTTTG            CCATCGCCGCCGTAA  46 1
CYD39_RS22810 NONE
CYD39_RS22805 4699690 .. 4699709 -  -7.9  -3.25823   CCTGTTCCATAGTAA            CCTCAGT GATGAT ACTGAGG             TCAGCCTATACCTGC  64 48
CYD39_RS22800 4698895 .. 4698910 -  -4.6  -4.35483   GGTGATGAGAATAAA              GCGGCT ATTT AGTCGC               TTTATTGGTTTCTGG  66 158
CYD39_RS22795 4697655 .. 4697691 -    -6  -4.30809   TAAGAGTCAGTAAAA   CTGGAAAGGCT-GGATA ATCT TATCTTAACCTCTCCAG    TAGGTGGGTATCCTG  73 46
CYD39_RS22785 4697014 .. 4697042 -  -3.8  -3.35046   GTATGTGGTGAAAGA        CGATGACGAG GCGGTAAAA CTCGCCAACG        ATTCCCACTACGGCC  49 344
        mdtM 4692995 .. 4693028 -  -4.5  -2.73364   AAAAACATCAGATGA     TCCTGTGCCGGATAA GCCT CTATCCGGCAGAGTG      TTTACTTCTCAGTGG  47 27
CYD39_RS22765 4691601 .. 4691617 -  -9.5  -2.72144   GCATCGGTGGGAAAT              GGCATTA AAT TAATGCC              TCCCACGTGCGGGGT  69 80
CYD39_RS22760 4690013 .. 4690045 - -10.6  -3.14463   AACTGGGGTGAGCAA     CGGCCCGT-CA-GGGC GAG GCCCATGGATGGGCCG     GGTAATCCGTAGCCA  78 248
CYD39_RS22755 NONE
CYD39_RS22750 NONE
CYD39_RS22745 4687049 .. 4687063 -  -5.6  -3.28712   CGTCCTCTTTCAGAA               TGCCGC GAT GGGGCA               GCCTGAAACTAGCAG  56 44
        hypT 4685817 .. 4685845 -  -8.2  -4.37658   AACGTGGCGATAAAA       CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA       ATCGATAGCCTTATT  81 235
        trpS 4682676 .. 4682697 -  -4.3   -3.7642   GTTAATTAAGAAAGA           CGCCCGC GCAGCGAA GCTGGCG            ATGTGGCAGCACCTG  55 143
CYD39_RS22715 4680812 .. 4680822 -  -8.2  -3.66178   TTTGGCAATCCTAAA                 GGCG GAA CGCC                 TCTCATGCTGGCGCA  68 229
CYD39_RS22695 NONE
CYD39_RS22690 4676052 .. 4676081 - -10.2  -2.75343   TGCATACTTTTAAAC       GGAGGTATA-CCT CTTGT AGGCTATACCTCC       TGCTTCACGTTATCG  71 35
CYD39_RS22685 4674773 .. 4674807 - -13.9  -3.89501   TAACAGCTTTATAAA     TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA     TTTATAATTAGAGGT 100 33
CYD39_RS22645 4662670 .. 4662686 - -12.3  -4.95758   ATGACAGCACAAAAA              TCGGGCA GTA TGCCCGA              TTGTGATACGGCAAA 100 41
CYD39_RS22610 4655874 .. 4655885 -  -5.8  -2.84276   ACGCTGAATGAAGTA                CGTG AAAT CACG                 GAAAAATGGTTATCA  50 508
CYD39_RS22600 4654501 .. 4654518 -  -5.6   -3.1876   AACCTTAGGTATGAA             GGTGAA TTAATG TTCACC              TTTATTCTCTGTTAA  54 101
CYD39_RS22580 4649226 .. 4649244 -    -8  -3.06228   CTCATGATAAAGAAG             CCGGGTAC AGC GCTCCCGG             TCGGGAGTCGCCCGG  62 68
CYD39_RS22570 4647564 .. 4647585 -  -2.9  -3.66356   ACCTGCAACTCGAAA           GACGAAGGG AAGC CCCTTTTTC            GGGTAAGCCCGTTCC  50 170
CYD39_RS22560 4644797 .. 4644833 - -16.1  -3.53224   CACCTGGCCCTGAAA    TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA    GACAAAAAACTGTCA 100 103
CYD39_RS22455 4627586 .. 4627596 -  -5.4  -3.54129   CAGACCTGCTGCAAA                 GTCA GTT TGAC                 GCGCTGGAGCGACCG  55 182
CYD39_RS22445 NONE
        idnO 4625125 .. 4625142 - -12.7   -3.6581   ATTAGTGCCAAAATA             GCAGCGC TTAC GCGCTGC              GTCGTATTTCCCTGG  95 41
        idnT 4623781 .. 4623792 -  -2.2  -3.41693   CGGATGATGAATTAA                TGCA GAAC CGCA                 TTCAGCGCCAGTACG  45 10
CYD39_RS22430 4622587 .. 4622598 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTAG CGCC                 GCCATCCGGCAGACA  63 142
        pepA 4618358 .. 4618394 - -11.6  -3.30124   CCGTAGGCCGGATAA   GCGCAGCGCCATCCGGCA AAA CGCCTGATGGCG--GCGC   TAATGCGCCTTATCA  83 63
        holC NONE
CYD39_RS22405 4614864 .. 4614883 -   -15  -4.66609   TATCTGATGTAAAAA            GGCCGACG TTTA CGTCGGCC             CATAATTCATGTTGT 100 139
CYD39_RS22395 4612882 .. 4612922 -  -8.6  -3.61894   AACTTCCTTGAATAA TAAGTGATTCCCGGATAACA GGA TGTT-TCCGGG-ATTACTTA TATCAGCAAAAATAA  72 73
CYD39_RS22390 4612264 .. 4612280 - -13.7  -3.72576   TCTGTTCTGAGTAAA              GCCTGCC AGC GGCAGGC              AAAAAAGAACTCACT 100 119
        argF 4609524 .. 4609542 -  -5.2  -4.37886   GCATCGGCGAGAAAA             CCGTCGTC CTG AACGAAGG             TGACTTTGTGGTGTT  70 202
        arcA NONE
        arcC 4606326 .. 4606338 - -10.5  -3.63515   CTGTAGGCCGAATAA                GGCGG AAG CCGCC                ATCCGGTAAAAAGCC  78 41
        argF 4605203 .. 4605231 - -13.2  -2.62184   TCTCTCCTGATATCA        CGGATATGCGCC GCGAG GGCGCATATCCT        GTGGGATTAGTCGCC  84 32
CYD39_RS22350 4603758 .. 4603768 -  -4.6  -3.28791   AGTCCTGTCGGATAA                 GACG CGT CGCC                 ATCTGGCTCGTTACA  52 36
CYD39_RS22345 NONE
        pyrL 4602908 .. 4602925 - -12.7  -5.75342   CCTGGGCAAAAAAAA             GCCCCTC AATT GAGGGGC              TTGGTATTGGTTTTC 100 13
        pyrB NONE
        pyrI 4601458 .. 4601475 -  -3.4  -3.32844   GCCGGGATCTCATAA             CCAACC CAAATT AGTTGG              CCAGCACCACATAAT  48 18
CYD39_RS22320 NONE
CYD39_RS22315 4600163 .. 4600173 -  -2.4  -3.64703   TGCCGTTTATTCAAA                 GTCG CGC CGCC                 TGGCCGCTGATGGCG  50 336
        treR 4596264 .. 4596277 -  -2.3  -4.56775   ACGTTGGTTTAAAAA               TGGGA ACGT TCCCT                AAACGCAGCGACGAT  61 77
        treB 4594755 .. 4594767 -  -3.3  -3.05384   TGCGTTGGGACGCAA                CTGCG CCC CGAAG                AAATATTAGACAATT  45 31
        treC 4593017 .. 4593047 -  -3.9  -3.16921   AGTAACCTGGAGCAA       CGCCACAGCCC GTGTCAATA GGTTTGTGGCG       TTTATCCGTATAAGG  48 49
        nrdD 4590479 .. 4590490 -  -5.8  -3.30124   TTGTAGGCCGGATAA                GGTG TTTA CACC                 GCCATCCGGCATTTA  56 59
        nrdG 4589771 .. 4589782 -  -5.8   -2.9356   AGGCATATGCATATA                CCTG TAAG CAGG                 AGGCGAAAGAAGGGC  51 86
CYD39_RS22275 NONE
CYD39_RS22270 4588588 .. 4588604 -  -3.7  -3.25204   GGAGGGGGAAATAGA              TCAACAG ACG CTGTTTA              AAACGCTGTGCGATC  47 454
CYD39_RS22210 4578688 .. 4578706 -  -5.9  -3.53811   TTCAGGCGGTGGAAA             CGCGCGA GCGGA TCGAGCG             GGAGCTACTCGGACG  57 100
        iolC 4569973 .. 4570001 - -16.7  -3.02043   AATCGTCCTTGAACA        CGCCCCTTGTCCG ATG CAGACACGGGGCG        TGATGAGGCAGGCAT 100 40
CYD39_RS22175 4568365 .. 4568380 -  -6.1   -4.1552   CAGTGGCGGAAGAAA              GCCAG ATGCGG CTGGC               CTTTGAGCCGATCGG  67 434
CYD39_RS22145 NONE
        iolA 4561543 .. 4561553 -  -6.8   -3.2048   CTGAAAGCGTATTAA                 CCGA GAG TCGG                 CATACTGAACTCCGA  59 11
        iolB 4560661 .. 4560683 - -12.7  -5.46657   GAGTTGAATAAAAAA           GCCAGCCGC AGAGG ACGGCTGGC           AAAGTACCACTCAAC 100 47
CYD39_RS22125 NONE
       iolT1 4556980 .. 4557015 - -12.8  -5.53991   GACGGAGTAAAAAAA    CAA-GCCGATGATCG TATTTAG CGATCATCGGCATTG    TGGTGAAACTTAATC 100 35
CYD39_RS22105 4553033 .. 4553068 - -13.3  -3.23274   GGCCTGATAAGGCAA    CGCCGCCATCGGACA TGTTAT TGCCCAATGGCGGCT     TCATGCGTTATTCCG  91 55
CYD39_RS22100 4552290 .. 4552311 - -10.9  -5.11063   ATTAGCCAATAAAAA           GGCCCTCAT TACT ATGAGAGCC            TTTATCTTGACGATT 100 55
CYD39_RS22095 NONE
CYD39_RS22090 4549518 .. 4549535 - -12.7  -3.14878   GCCCTGAACTGAACA             CGCCACC CTCG GGTGGCG              TTGTTTTTTACATTC  86 53
        msrA 4542691 .. 4542712 -  -5.1  -4.41895   AACGTTTAATGAAAA           CCGGCTC GTAGCAGT GAGCCGA            TAAGTTCAGGGCTAG  68 115
CYD39_RS22065 4541232 .. 4541252 - -16.9  -6.31682   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGAGCCG            TTGATGTTTCTGGCA 100 49
CYD39_RS22055 4539920 .. 4539937 -  -5.5  -3.53012   GGTTCCTCGCTGAAA             TTCTGCC TTGT GGCGGAA              GGCCAGGCGCAGCTT  55 189
CYD39_RS22045 4537093 .. 4537146 - -19.3  -2.78816   GGAGCGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACACACGTT 100 39
CYD39_RS22035 NONE
CYD39_RS22030 4534737 .. 4534756 -  -7.8  -2.98493   GCGAGTATGAAATTA            GCGTTCCG TGAC CGGAACGA             CGGTCGCTTTTTCCG  62 3
        ytfE 4533447 .. 4533470 -  -4.6  -4.07568   GGCGTGGCGCCAAAA          GCGTT-CGCTA AGC TATCGAAACGC          GCGGTACCGGCGAAA  62 524
CYD39_RS22010 4530615 .. 4530636 - -10.2  -3.61398   TTGGTGGGTGAATAA           GGTGAAGC GGTAAT GCTTCACC            TGAACGAATAGGGTA  78 66
CYD39_RS21980 4527410 .. 4527429 - -13.6  -5.87688   ATAAGCGAAAAAAAA            TGCCCCCT GACC AGGGGGCA             AAACTATGGCATTTT 100 48
        ulaG 4520893 .. 4520910 - -12.7  -5.22943   AGTAAATGGAAAAAA             TGCCGGG TAAT CCCGGCA              TGATATCGACTCACA 100 36
        ulaR 4519928 .. 4519945 -  -3.3  -3.64703   TGCCTGCTATCGAAA             CCTTCCG GCTC CAGCAGG              CACTCGCCGGGGCGA  51 141
        bsmA 4518781 .. 4518793 -  -2.7    -3.192   AAAGCAATGTAAAAC                TGACT AAA AATCA                ATCTACTGTTATTGA  45 34
CYD39_RS21920 4518052 .. 4518075 -  -3.1  -4.36914   CGGGTGCTGACAAAA          CAACACGGC GTCTAT GACGTATTG           AGTGAAGCTTTTGCG  62 346
        queG 4494788 .. 4494802 -  -8.6  -3.76413   CTCCAAAATTTGAAA               GTGCTT GTT AAGCAC               AGACGCACCCAAGCG  75 383
CYD39_RS21790 4493402 .. 4493436 - -11.5  -3.04144   CTGTGAGGCGTAACA    TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA     GCTCTCCCGCCACTG  79 43
        rsgA NONE
         psd NONE
        mscM 4487290 .. 4487304 -    -7  -3.86015   CATTGCGTTTACAAA               CTGCCC GCC GGGCGG               CTGGTTTTACCCGCT  66 4
        frdA NONE
CYD39_RS21745 NONE
        frdC NONE
        frdD 4480490 .. 4480518 - -11.8  -5.83211   CAGGAAAAGAAAAAA        TGCCCTCTTATC GGGTA GATAAGAGGGCG        TCGTGGCAACTTAGA 100 36
CYD39_RS21730 4479868 .. 4479890 -  -3.4  -3.14931   CTCAGTGCGCATTAA           TTCGTCGC TGATATT GCTACGAA           CCTGATTGTTTTACC  46 19
CYD39_RS21720 4478246 .. 4478267 - -10.1  -4.59773   CGTTATCGGGAAAAA           TGGTGCAGC GTAT GCTGCGCCA            TCCTATTTTTCGCGC  91 464
        epmB 4476421 .. 4476439 -  -4.4  -2.76291   TAATTCGAAAATGCA             GTACACGC TAA GCGAGTCC             TAAAACGGACTTTAT  47 177
CYD39_RS21695 4474950 .. 4474973 - -13.8  -4.00066   CCCAGAATTGAGAAA          CCCCCGGGCA GAAA TGACCGGGGG           TTTTTCTTTTAGTCA 100 504
        yjeH 4470965 .. 4470990 -  -2.5   -5.4833   TGATGCAACAAAAAA         TGGCGGCCGG TGAGAGC CCGGCGGC-A         GAAATGATTAAGAGT  85 351
        aspA 4468961 .. 4468981 - -15.5   -5.4505   TCTTGTAAGAAAAAA            GGCACGTCA TCG TGACGTGCC            TCTTTGGTACTACCC 100 48
CYD39_RS21660 4467555 .. 4467577 - -14.8  -3.30635   CAAAGGGCGGGAGAA           TGCGGGGCGT GAT ACGCCCCGCG           GGTGAAACACTTACA 100 36
        cutA NONE
CYD39_RS21650 NONE
CYD39_RS21645 NONE
CYD39_RS21640 4464608 .. 4464624 - -13.7   -5.1417   CCAGAAAAGCAAAAA              CCCAGCC ATA GGCTGGG              TTTTCTGAATAAGTG 100 39
CYD39_RS21625 4460835 .. 4460845 -  -3.2  -5.06414   CTCTTGTAATAAAAA                 CACC TAT AGTG                 CATTAGTGGAAGCCG  76 189
CYD39_RS21575 4452421 .. 4452464 -  -4.2  -3.28712   TCTTTTCGTCCATAA TTGCCTGTCTCTG-T-TGTT GGAGTG AACATATCAAAAACAGGCAA TTACACAATTTTAAT  50 122
CYD39_RS21550 4448498 .. 4448523 -  -2.7  -4.98531   CGTGTAAATCAAAAA         TTATTCTGAAA AATA TTTCAAAAGAA          AACTAATATATAGCT  70 226
CYD39_RS21545 NONE
CYD39_RS21540 4447307 .. 4447318 -    -3  -3.22832   GAAAAAATTACGTAA                TATC GACT GATA                 TGTAAAACTCATTCA  45 6
CYD39_RS21530 4446363 .. 4446384 -    -3   -2.6927   AGGGCTCAGAGACGA           TATCCCCC AACCAG AAGGGATA            GCCATGGATAATGAA  40 404
CYD39_RS21520 4443538 .. 4443551 -  -2.4  -3.04263   ACGCGAGCCGGAAGA               TCAG TTTGGC CTGA                TGCTATTGGCCTGTA  42 333
        dcuS NONE
        dcuR 4436379 .. 4436393 - -11.4  -4.98531   TTTTGAAATTAAAAA               CAGCGC AGA GCGCTG               TAATAATAGAAAATA 100 181
CYD39_RS21485 4435906 .. 4435926 -  -5.4  -3.80841   ATGAGCATCAGGAAA            TGGCGAAT ATTCA ATGCGCCA            GTGGCGACGATTAAC  61 65
CYD39_RS21480 4434459 .. 4434475 -  -9.3  -3.28712   GCGCGCCGCGCATAA              CCGGGCG GCG CGCGCGG              CCATTACAGGAATCC  71 29
CYD39_RS21475 4432667 .. 4432692 - -11.9  -3.30124   GTGCAGGCCGGATAA         GCCGGATAAGCG TAG CGC-CATCCGGC         AATTAACCGATAACG  85 70
        melR 4428396 .. 4428425 -  -6.5  -3.14344   GACCCGCCGTATGAA       TGTGACGTGGGCAA GTA TTACCC-CGTCAAA       TAGGGGGTGTAAAGT  57 169
        adiA 4425970 .. 4425989 - -12.1  -5.60993   TTTTGTATAAAAAAA            GCGCGGG ATGGGG CCCGCGC             AAAAAGGTATGACAG 100 105
CYD39_RS21450 NONE
        adiC 4423447 .. 4423461 -  -2.9  -4.61873   CGTGACAAAGTAAAA               TTAAG TGAAC CTTAA               GAACTTAATGTTGGA  65 97
        eptA NONE
        pmrA NONE
        pmrB 4419683 .. 4419693 -  -8.2  -4.08064   AATCGTCCGCTAAAA                 GGCG CAA CGCC                 AGCGGCGTCGGACAT  77 343
CYD39_RS21415 NONE
        yjdN 4416870 .. 4416885 -  -3.2  -2.87564   CCATCTTTCGACAGA              CTGTAG CAAA CTACCG               TCATTATTTATTCTA  44 116
        phnO 4416270 .. 4416283 -  -2.3  -3.90922   ATTTTTGCTAAAGAA               GCGAG TCAG CTCGT                TTAACCTTTATCCAG  53 132
        lpxO 4415187 .. 4415220 - -13.8  -3.55219   AACGCCAGGATAGAA     CAGGCCGCGGCAGG CAGTTT CATACCGCGGCCCG      GCTTCAGAGGAGGCT 100 29
CYD39_RS21395 4412605 .. 4412624 - -13.6  -5.64274   GTATGGATAAAAAAA            CAGCCTCC GGGC GGAGGCTG             TTATAGGGAAAATGC 100 123
CYD39_RS21390 4411700 .. 4411735 - -18.6  -3.13504   GTGGGATGAAAATTA    TGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACA    GCGAAAGAGAATGTA 100 146
         acs 4399707 .. 4399722 -  -3.2  -2.80816   TGGTCATTCATCACA              GAGCTC TCCA GAGGTC               CCCCTGCGTCTTTCG  43 245
CYD39_RS21340 NONE
        actP 4397747 .. 4397767 -  -3.1  -2.62293   AACGGTAAGATTAAT            GCGCACGCC CTT GTTGTACGC            CGAATCCCGTTTGGG  42 0
CYD39_RS21320 4395502 .. 4395528 -  -9.5  -3.06796   CTGGATTTGATGGAA         GCGCTACTGAT AGAAA ATCAGTAGCCC         TTGTGGCCCGGTGGC  71 117
        soxS 4390170 .. 4390197 - -11.2  -4.30719   CCTGGTTACAACAAA        CGCCCGCGCCTC TGAC GATACGCGGGCA         GACGCCCTACAGGCG  93 32
CYD39_RS21285 4387542 .. 4387562 - -11.2   -5.4505   CTGCTTAATAAAAAA            GACCCGTT GCACA AACGGGTC            TTTTTTTGTCATTTA 100 234
CYD39_RS21250 4362758 .. 4362784 -  -5.9  -3.12668   CAGGTGTATATCGAA        GGT-CAATTGCG TACC CGCAAGTGGACC         GATCAGAGTGGCCAG  52 302
        uvrA 4359403 .. 4359438 -  -9.7  -4.77036   TGGGATGAGGAAAAA    TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA     AGGTTATTTGAGCAT  91 29
CYD39_RS21235 NONE
CYD39_RS21230 4358327 .. 4358341 -  -4.2  -4.07885   CAGCCTCTCTCAAAA               CCAGCC CGG AACTGG               CAGAGTTGTTACGCC  62 214
CYD39_RS21195 4351729 .. 4351759 -  -5.6  -5.80364   AGCCGAACAAAAAAA      GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC      TTTGCAGAGCTATTA 100 38
         zur 4347892 .. 4347918 -  -5.3  -2.94422   CAGGCGGAAAAAGAG        GTTGTTGACTGGG AAA CCC-GT-AACAAC        TATCGCTGGTAATAT  50 136
CYD39_RS21145 4341991 .. 4342001 -  -6.8  -2.78384   CGGTGGCTTACGATA                 CGCA ATA TGCG                 ATGGTCGACAGAGAT  52 433
        malE 4335521 .. 4335532 -  -5.8  -3.30124   TTGTAGGCCGGATAA                GGCA TTTA TGCC                 GCCATCCGGCACAGG  56 50
        malF NONE
        malG 4332880 .. 4332895 - -10.4  -5.66684   TAACGCATAAAAAAA              GCGCTC CGAA GAGCGC               CAAAATACGACCATA 100 106
        lysC 4324334 .. 4324346 -  -4.8  -4.13767   CGCGTCAGCCGAAAA                TGCC GGTCA GGCA                ATTGCTGACAGAATG  62 375
CYD39_RS21060 NONE
CYD39_RS21055 4322755 .. 4322767 -  -4.8  -2.63723   CTCTGATTAATGAAT                GCAG CTAGC CTGC                CCCCATTGCAAATAA  48 4
CYD39_RS21050 4322383 .. 4322421 - -12.7  -3.74303   AAAAGTTAAAACGAA  TAAA-AAATCCCCGGCGT ATAA ACGGCGGGGATTTGTTTA   ATGGTTCCCTCGTTG 100 23
CYD39_RS21045 NONE
CYD39_RS21040 NONE
CYD39_RS21035 NONE
CYD39_RS21030 4319646 .. 4319665 - -13.6  -3.53091   ATTCGTCGTGTTAAA            TTCGGGGC CGTA GCCCCGAA             GTAATTAACCGCCAA 100 30
CYD39_RS21025 NONE
CYD39_RS21020 4319203 .. 4319225 -  -9.1  -3.53012   GCTTGGGTCTGGAAA           CCCACAGGC ATTAA GCCTGCGAG           TCGTATTCGTGTTTA  73 13
CYD39_RS21015 4316753 .. 4316768 -  -2.6  -3.02144   CTATTTCGCCTAATA              CGGCATA CAT TATGC-G              TACTCCCGGCGCCGT  43 19
CYD39_RS21010 NONE
CYD39_RS21005 NONE
CYD39_RS21000 NONE
CYD39_RS20995 4313651 .. 4313663 -  -6.3  -3.14839   TACATATATGCAATA                TTTGC AGC GCAAA                GTGATTACATTTTCA  57 199
CYD39_RS20990 4313140 .. 4313153 -  -3.9  -2.56343   ACGGGAACCACTAAT               GAAAT TTTC ATTTC                TCATTCCTGAAAACA  44 19
CYD39_RS20985 NONE
CYD39_RS20980 4310680 .. 4310698 -  -4.7  -4.36595   TACGTAAAGTTAAAA             TGAAATT GCTGT AATTTCA             CCTTTGTCTACAGAA  66 1
CYD39_RS20975 NONE
CYD39_RS20970 NONE
CYD39_RS20965 NONE
CYD39_RS20960 4306683 .. 4306693 -  -2.6  -3.80014   ATATTCACCATGAAA                 TTTT TAC AAAA                 CCGTTTGAGCCTTTC  52 4
CYD39_RS20955 NONE
CYD39_RS20950 4305312 .. 4305329 -  -2.7  -5.24796   TCGATATAATAAAAA             TTCATTC CTGC GAATGAT              CTCATGCCGCCAGTA  76 306
CYD39_RS20940 4304054 .. 4304067 -  -3.7  -2.52896   CCATCCGGCAACGTA               TCGCC CGAT GGCGC                TTACGCTACCGTATT  44 102
        panS NONE
CYD39_RS20930 4302566 .. 4302579 -  -2.3  -4.60258   GGACGAAAGAAGAAA               GGACG TTAA CGTCT                GCCGCGCGTCGGCGT  64 17
        pepE 4300153 .. 4300204 - -13.9  -3.79043   GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTAC GGAGAACATGCGT GTAGG-CCCGCCATTCGGCA TTCAATGTGGCCAGG 100 43
        iclR NONE
CYD39_RS20875 4291105 .. 4291120 -  -4.7  -2.63112   AAATTTGCTACATGA              CGGAA GTGAAT TTCCG               CGATATTCCGCCAGC  44 278
CYD39_RS20850 4284672 .. 4284707 - -16.2    -4.015   CCAGGCATCAAACAA    GTGAAGAAGCCCGTCC GTCT GGACGGGCTTCTTTGC     GTGTGTGGTAACTGT 100 145
        purH NONE
        purD 4275874 .. 4275901 -  -9.7  -5.00616   CGGCGCTGGAAAAAA        CGGGCGGCAAC AAAACG GAAGCCGCCCG         TCAATTGGGCATTAC 100 71
        zraP 4272479 .. 4272502 - -16.8  -3.08679   CCTTTTGATGGAATA          CCGAATGGCG AAGC CGCCATTCGG           CAAACATGCTCTACC 100 36
CYD39_RS20770 4267484 .. 4267506 -  -6.8  -3.75378   ACTCCGACAAGATAA           CCGCCCCTCC GAA GAGGGGGCTG           AAGTAAACTACCCGT  66 55
        thiC 4265267 .. 4265282 -  -3.2  -2.90615   ACGGTCGGGAAATCA              GGCTGA TACA TCAGAC               TTCCTCCCGCTTGAG  44 20
        thiE NONE
CYD39_RS20755 NONE
        thiS NONE
CYD39_RS20745 NONE
        thiH 4261732 .. 4261755 -  -8.8  -5.72616   ACGGACATAAAAAAA          CGGGAGGTCG ATAA CAATCTCCCG           TTTTTCGCATTACGT 100 78
CYD39_RS20725 4259485 .. 4259512 - -14.2  -3.61764   CGAGTAATCGTTAAA        TGGTGGAGGGGT ATTT ATCCCTCCACCA         GCATTGTGCTGGATG 100 346
CYD39_RS20650 4244916 .. 4244929 -  -5.3  -2.62983   GCTATTGCTACATCA               GTTCA GCGA TGAAC                GAGGGCCATCCCTGA  48 189
        coaA 4243908 .. 4243923 -    -9  -5.63374   CGAATAGTAAAAAAA              GGGAGT CGGT ACTCCC               CTTTTTTCTGTTATT 100 36
        trmA 4231628 .. 4231650 -    -2   -3.9638   GAGCAAGAGAAAATA           GCACATCATT CCG AATAACGTGA           AGGACGAGTAATGAA  53 442
CYD39_RS20580 4229364 .. 4229375 -  -5.8  -2.52516   GCCGTTATGAGCAAC                TGGC AGAG GCCA                 TCCGTGGCGCAATGG  48 61
        argE 4223501 .. 4223519 -  -7.4  -3.87815   TCTCATCTTTATAAA             GCCACG TAAAACC CGTGGC             GTCAATTACTGCGAA  70 211
CYD39_RS20550 4220560 .. 4220572 -  -6.3   -4.0056   AGAAAGATTTATAAA                TGCAT AAA ATGCA                GACAGGAATATATTG  66 115
        cptA 4218563 .. 4218587 -  -2.1  -3.49777   CGTGATACATGATAA          TCCCCTGCC GATCGCA AACAGAGGA          AACAGTAACGTCGAA  47 156
CYD39_RS20540 4217507 .. 4217518 -  -3.6  -4.02334   TATGGACAGGATAAA                GGAG CGTG CCCC                 GGATGCGCTATGTGA  57 228
         fsa NONE
CYD39_RS20530 4215654 .. 4215677 -   -14  -3.67976   GTCAGCAAGCTGAAA          TACTCCTGAC TATC GTCAGGAGTA           TTGCTCAGACCTTAT 100 37
CYD39_RS20525 4214595 .. 4214609 -  -8.5  -3.26031   GCGAGGTGAAATACA               CGGCG ACCCG CGCCG               ATCTGGTGTTTGGTT  62 223
CYD39_RS20505 NONE
CYD39_RS20500 NONE
        mscS 4206003 .. 4206015 -  -4.7  -4.08216   TCACTTTTTCGAAAA                CGGCG ACG CGCTG                AATGAACAGATGGTG  62 420
        metJ 4202081 .. 4202107 -  -6.5    -5.055   GGAATCGTTAAAAAA         GCGCGGCCAGA GGCGT TCTGACCGCAT         GCTTTGCTATCAGTA  83 35
CYD39_RS20475 4199823 .. 4199850 -  -9.8  -2.72227   AATACGTTTTAACCA        TTCAGGCGGAAG TTGG CTTCCGCCTGTT         TTACTTTTACTATCT  69 45
CYD39_RS20470 4198981 .. 4198994 -  -9.5  -5.61596   ACCGCCAGAAAAAAA               GCGCC GCAG GGCGC                TTTTTTTGTTTTCTA 100 38
        priA 4196291 .. 4196301 -  -2.6    -3.494   GAAGCGGTTACAGAA                 TTTT CAT AAAA                 AGTGTGATGGATCTT  48 72
        cytR NONE
        ftsN 4194031 .. 4194075 -  -2.2  -3.14132   CCCCTTGGTTACTAA TGCT-GAATTGCGGCCCCGTAC GGC GTACGGGG-CATAATGCAAGTA TAGATGGGGGAGATT  44 50
        hslV NONE
        hslU 4192089 .. 4192106 - -11.3  -5.07486   TAGCGCCAATAAAAA             TGGGGCT TTTC AGCCCCA              TCAACAGTGATGAAA 100 56
        menA 4191116 .. 4191130 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTAAA  52 36
        rraA 4190539 .. 4190554 - -11.8   -5.3236   ACAACGCATAAAAAA              GGCGCC TTAC GGCGCC               TTTTTTGATCACTCG 100 34
CYD39_RS20420 NONE
        glpK 4187281 .. 4187310 -  -7.1  -2.66602   GGAGGGAATAATTGA       TGTGTGTGCGGAG TTGC CCCCGCACAAAGA        TTTTGCCGGATGGCG  57 44
        glpX 4186165 .. 4186186 - -10.9  -2.74122   CGTCAGGAGAAAGAT           TTCCAGCCC CGCG AGGCTGGAA            GGCTCTAACTAACAA  74 46
CYD39_RS20405 4184859 .. 4184875 -  -3.6  -3.65351   TTATTCTCATTTAAA              GGGCGT ATCGG ACGCCG              TGATTTCTGGATTTG  53 514
CYD39_RS20395 4184054 .. 4184074 -    -4  -3.29727   GCGAATTAAGGAAGA           TGGCCGCTC GTCA GAGCAGC-A            TGGTCTGTGAAACAG  50 80
        tpiA 4183159 .. 4183173 -  -2.7   -4.0162   CCTCCACAGCATAAA               TGCCG GATGG CGGCT               TTACCTTATCAGGCC  56 101
        lsrR NONE
        lsrK NONE
CYD39_RS20340 4173125 .. 4173137 -  -6.3  -2.54276   ATCTTGAACCAACAG                GTCAT CAA ATGAC                AGCTTGATATTGCAT  53 114
        cpxR 4162717 .. 4162731 -  -2.8  -3.53091   ATGCGCGCGGTTAAA               CTTCCT ATC ATGAAG               CGGAAACCATCAGAT  48 18
        cpxA 4161326 .. 4161347 - -15.9  -5.36441   CGGCGAGATAAAAAA           TCGGCCTGC ATTC GCAGGCCGA            TGGTTTTTAGGTTCG 100 32
CYD39_RS20255 NONE
CYD39_RS20250 NONE
CYD39_RS20245 4156325 .. 4156337 -  -2.6  -3.28712   GCGTTGGCCGGATAA                GACG CGAAT CGCC                ATCCGGCAACGAGAT  46 59
        rhaT 4153831 .. 4153864 - -10.3  -3.55444   TGTTCACGCGGGAAA     CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG      TAATCAAAGCGATTA  77 38
        rhaB NONE
CYD39_RS20215 4148944 .. 4148995 - -13.8  -3.30243   ACGTAGGCCGGATAA GCGCAGCGCCATCCGGCAAT TGTGTTTCATTT ATTGCCGGATGGCGACGCGG GCGTCTTATCCGGCC 100 60
        rhaD 4148032 .. 4148043 -  -7.2  -3.80625   GCCGGATAAGGCAAA                GCCG CATC CGGC                 GTTGAGTTGGGAGGT  68 42
        fucO NONE
        rhaM 4146436 .. 4146472 -  -9.4  -5.49579   CGACAAAAAATAAAA   CCGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACGA    CTTACTGCAGATAGA 100 27
CYD39_RS20190 NONE
CYD39_RS20185 4144470 .. 4144484 -  -8.5  -5.10208   TAACGCCAATAAAAA               GCGCC GATCA GGCGC               TTTTTTCGTTCATGT  91 295
CYD39_RS20160 4136327 .. 4136341 - -12.8  -5.26875   CTTCGAACGAAAAAA               GCGCCC CTG GGGCGC               TCTTTCGGCAGTCGC 100 99
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE 4129557 .. 4129583 -  -5.8  -2.79098   GGTATTGAGCAATGA         TCCGGCTAAC GTAGATT GCTAGCCGGT         ATACCAGAGAACTTA  50 38
CYD39_RS20120 4127734 .. 4127788 - -10.2  -3.96624   TAGTTCCATTACAAA GTTTTCAACCTGAAAACAATTTAGCG CAA CGTTATCCAGTTTTCAAGTTGAAAAC AAAATTGAATTTTAG  82 37
CYD39_RS20115 NONE
CYD39_RS20110 4126750 .. 4126764 -  -2.8  -3.62275   ACCCATTAGCGGAAA               GCCA AACGCCG TGGC               TGATTTGGGGTCGCT  51 221
        yihU NONE
CYD39_RS20070 NONE
CYD39_RS20065 4118865 .. 4118903 -  -4.1  -3.74251   GATACCCTTACTAAA  CAACGGCATAT--GCAA TGTTTAT TTGCTGATATGCCGTCG  TTACCAGGCTTATTT  55 39
CYD39_RS20060 4117884 .. 4117915 -  -3.1  -4.25074   TATCAAATTCTAAAA      TATTACTTTGACT GTTTTA AGTCAGGGTAATA       GGTATCCTGCACAAA  60 53
CYD39_RS20055 4116933 .. 4116964 -  -7.4  -3.36991   CATTAGCCTTAAATA      GTT-ATGCGCTACTC TTG AAGTAGCGCCTGAAC      AAAGCAAGCACTTAT  63 40
CYD39_RS20050 NONE
CYD39_RS20045 4113362 .. 4113373 -  -7.2   -2.5805   ACCACTCCTTACAAC                GCCC CGAA GGGC                 ATCAGTCATTATTAT  57 43
CYD39_RS20040 4111888 .. 4111917 -  -4.4  -3.21872   TTCAAATATAGGGAA      GCCGC-C-ATCCAT CGGG ATGGATAAAGCGGC       AAGCGTCGTTTAATT  50 35
        ompL 4111112 .. 4111132 - -10.4  -2.80195   ATTCAGGATGAATGA            GCGGGCAG AACAA CTACCCGC            TGTGATGCAGATTCG  71 60
CYD39_RS20030 NONE
CYD39_RS20025 NONE
CYD39_RS20020 NONE
CYD39_RS20015 NONE
CYD39_RS20010 NONE
CYD39_RS20005 4105387 .. 4105413 -  -8.6  -4.87665   TCTTACGGATAAAAA         CCCTGCCGAAAT GAA AACTCGGCGGGG         TTTTTTTATTCACAT  89 31
CYD39_RS19995 4101577 .. 4101594 - -11.3  -5.24129   TTGGTGGAGAAAAAA             GCCCATC CTGG GATGGGC              TGAAAGTTTCCACGG 100 187
CYD39_RS19990 NONE
CYD39_RS19985 4098957 .. 4098980 -  -6.8  -3.93038   CATCGGAACAGTAAA          GCGCAAAA TAGCAGCG TTTTGCGC           TCAATTATTAATCTT  68 59
        yshB NONE
CYD39_RS19960 4095378 .. 4095389 -  -7.2   -2.5294   TAGGCCGGATAAGAC                GCGC AGCG GCGC                 CATCCGGCATAGCGG  57 45
CYD39_RS19950 4090983 .. 4091007 - -14.3   -5.8096   GATAAAAAATAAAAA          GAACGCCGGTC ACT GACCGGCGTTT          TTATAAGATGTTTTA 100 10
        mobA NONE
        mobB 4087571 .. 4087612 - -17.5  -3.76224   CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA  TCTGTGGTCTGTCGG 100 254
        fadB NONE
        fadA 4074296 .. 4074314 - -13.1  -5.04385   CATATGGTGAAAAAA             CCCGCCC CTGAC GGGCGGG             AAAAACGGCAACTAA 100 181
        rfaH 4069116 .. 4069130 -  -4.2  -3.52204   TTACGCCGAAACCAA               CGTCAC GAC GCAACG               AGCCCGCGTATCTAC  52 152
CYD39_RS19800 4060029 .. 4060043 -  -2.8  -5.72118   AAAAAATATAAAAAA               TGCTGT GGT AAAGCA               TAGCTAACGTGGCGA  89 108
CYD39_RS19790 4058393 .. 4058423 -    -9  -3.14931   TTTATCCGGCAGCAA      TGCGGCGCTACCC TTTGAC GGGTAGCGCC-CG       TGCCTGACCTGATTA  70 114
        metR 4054790 .. 4054812 -  -4.1  -2.72344   CTTTATGTGGAACTA          TGGCG-CTAC CCAG GTAGACGCCG           GGACGCTGGGCATCA  45 119
        rhtB 4051243 .. 4051260 -  -3.3  -3.28712   GTTTGTCGGCGATAA             CGTCGGCG CTG CGGCG-CG             CTGGGGTATTTTCGC  45 240
CYD39_RS19740 NONE
        rarD 4046346 .. 4046375 -  -4.9  -3.44051   TCGTTAGCATGACAA       TATGCTACCCCCC TTAC AAGGGGAGGCATA        TTTTTTCAGATTATA  56 59
CYD39_RS19730 NONE
CYD39_RS19725 4045481 .. 4045516 - -14.8  -2.62175   CTGTAAGACATTAAG    GCCAGGGTGATTCAGC TGCG GCTGAACCACCCTGAA     AAGTTACAGGCTCCA  89 29
CYD39_RS19680 4037283 .. 4037301 -    -6  -3.29739   TGGAACCGATACGAA             TTACCGTT GTG AGCGGTAA             AGGATAAAACTCAGC  59 7
        cyaY 4036667 .. 4036681 -  -5.6  -4.95957   GAAATCAAGGAAAAA               CGTTGG TCA CCAGCG               TTACGTCAACTTTTT  80 237
        hemC NONE
        hemD NONE
        hemX 4029441 .. 4029469 -  -2.5   -4.3587   GAGCAACAACACAAA        GAGCAATAATACT TTT AGCATCATTATTC        TCCTTGCGGCGCGGC  60 20
        hemY 4027879 .. 4027895 -  -9.3  -4.16943   GGCGACATGCTAAAA              CCTCGCC AGC GGCGGGG              GGATGACAATCGCGT  82 395
        rhlB NONE
        gppA 4008099 .. 4008109 -  -6.8  -3.66178   CTGGCTAATCTGAAA                 GCCA TGA TGGC                 GGCAAAGCGAGCGAA  64 87
CYD39_RS19500 NONE
        ilvY 4000638 .. 4000660 -  -4.8  -3.83771   AAGAAATGCAGCAAA           TTCACCATTG ATG CTCTGGTGAA           TATGCTTAGCCGTAT  58 77
CYD39_RS19445 3991232 .. 3991244 -  -6.2  -5.15167   GATGATTAATAAAAA                GGGC GTAAT GCCC                TTTTTTTACGCCAAC  83 31
        hdfR 3989838 .. 3989857 - -10.8  -4.06419   CCCTGCCAGAAATAA            TCCTTAGC ATCT GCTAAGGA             TTTTTTTTTGCCTAA  86 100
CYD39_RS19400 NONE
CYD39_RS19395 3981403 .. 3981421 -  -6.7  -2.52946   CCGCTGGACAAAACG            CCAGCGCG TTTA CG-GCTGG             AAGGGTATCGGGCGG  51 395
        ravA NONE
        viaA 3970432 .. 3970450 - -10.2  -2.71712   GCTGCGCGGCGAAAT             GCCGCAGA CCA TCGGCGGC             GGGATTGGGCAGTCG  66 144
        asnC NONE
        mioC 3968134 .. 3968149 -  -6.8  -3.92373   TAGCCGATGGAGAAA              GCCCCGG GAT CCGGG-C              TATTAAAAAGAAGAT  68 306
        mnmG 3966085 .. 3966110 -  -8.9  -3.04089   TGTTAATAATCAAAT         GCCCGATGCGC TTTC GCTTATCGGGC          CTACAAATTTGTAGG  68 77
        rsmG 3965360 .. 3965377 -  -3.4  -3.30038   CAGAGTTAAATGTAA             CAACGC TGAAAT GCGTTA              TACCTGTCGATTTTT  48 84
        atpI NONE
        atpB NONE
        atpE 3963324 .. 3963336 -  -3.3   -3.4052   TCTTAATTCAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 3959776 .. 3959786 -    -4  -3.73968   AAATCCTCTACGAAA                 TAAC CTG GTTA                 AACCGCGGCGGCCCC  55 23
        atpD NONE
        atpC 3957894 .. 3957913 -   -10  -6.26417   GAGGATAAAAAAAAA            CCAGTCCG CAAT CAGACTGG             TTTTATGCTTTCAAG 100 47
CYD39_RS19275 3956963 .. 3956982 - -11.4   -5.1417   TCAGAAAAGCAAAAA            CCAGCGAC AGAG GCCGCTGG             TTTTCCGTTGCGCGT 100 50
        glmU 3955237 .. 3955251 -  -5.6  -2.83271   TTATTTTTATAAGTA               CTGCTC ATG GAGCGG               AGGATTATTTTATCC  50 91
        glmS 3953258 .. 3953275 - -12.7    -5.626   CAGCGCACAAAAAAA             GGCCGTC TATC GACGGCC              TTCTGCCTGGTAATA 100 49
CYD39_RS19255 3950486 .. 3950500 -  -3.4  -2.96611   AAAAAATGTTACAGA               CGTGAC CAG GCCGCG               GCTTTCTGGAACAGC  44 4
CYD39_RS19250 3949013 .. 3949039 - -12.2  -5.96894   ATGGAAATAAAAAAA         GCTGGCCCGGGG AGA CACCAGACCAGC         CTGCAGGGGGAGATG 100 43
        pstS 3947735 .. 3947748 -  -3.1  -3.72695   ACTCTTTCCATTAAA               CG-CGT TTT ACGACG               TTGCCCCTGCCGGAT  53 127
        pstC NONE
        pstA 3945828 .. 3945853 -  -8.3  -3.10175   ACGCCGTAAAATAAT         GCCTGAT-GGCG CTA CGCTTATCAGGC         CTACAATGTCTTTAA  66 37
        pstB NONE
        phoU 3944178 .. 3944204 -  -8.7  -2.84878   CGCGTTAACTGAAAT        GCCGGAT-GGCG CTAA CGCTTATCCGGC         CTACAGCATCTGTAC  65 86
CYD39_RS19210 NONE
CYD39_RS19205 3940183 .. 3940193 -  -2.4  -3.53811   CGTACGCTGCCTAAA                 GTCG CGC CGGC                 AGGAATGACGGTATC  47 501
        dnaA NONE
        dnaN 3929782 .. 3929797 -  -2.4  -2.75844   GCCGGGAGGCGAAAT              GGCAAG TAAA CCAGCC               CCTTTTCAGATTCTA  40 38
        recF NONE
        gyrB 3926109 .. 3926132 -   -14  -3.89614   AACCTACAGACTAAA          TCTCTCCCTT ATAT AAGGGAGAGA           TTACGCGGGAATATT 100 39
CYD39_RS19130 3923833 .. 3923856 - -10.2  -2.74012   TCATGAGTGGAACTA          TCGGCCCGAC GGCG ATCGGGCCGG           AGTGAATCAGGACAG  71 32
CYD39_RS19125 3922645 .. 3922658 -  -2.3  -4.08767   GGCAGCGGTTCAAAA               GCGGT ACTC ACCGG                CCACAAAGAAGCTAT  55 6
CYD39_RS19120 NONE
CYD39_RS19115 3920128 .. 3920160 -  -6.1  -5.04601   CGCATAAATTAAAAA      GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA      CCGAAGCCTGTCGGG  84 244
        torT 3916193 .. 3916216 -  -3.9  -3.18681   CCTGAACGTGATGAA          TCACACGCTG GAGTA CAACG-GTGA          AGCCATTAAGCTTAC  47 230
        torC NONE
        torA NONE
        torD 3911169 .. 3911179 -  -3.2  -4.39414   AATACTAAATACAAA                 CCCA TCA TGGA                 TATTGATTGGTATCA  62 121
CYD39_RS19080 NONE
        ccmA NONE
        ccmB 3908387 .. 3908413 -  -2.9  -4.39386   CTGAAACCAGTAAAA        TGTCCGTCGCGC CGGG GCGCTACTG-CA         CGCTGAGGCGCAGCG  60 18
CYD39_RS19065 3907611 .. 3907623 -  -6.2  -2.50493   TCCACGATGAAAATG                CCGG ACTCA CCGG                TGCCCCCTTTTCAGT  53 19
        ccmD NONE
        ccmE NONE
CYD39_RS19050 NONE
        dsbE NONE
CYD39_RS19040 3903306 .. 3903318 -  -7.7  -3.21593   GATGTCCTGATAAGA                GACGA TGC TCGTC                ATCATACTTCACACG  64 117
CYD39_RS19035 3901880 .. 3901891 -  -2.2  -4.11235   TAACGATGAGACAAA                CTGG GGCA CCAA                 ATCGTTGGCCATCCT  56 196
        ibpA 3900980 .. 3900996 - -11.5  -2.80113   GAGCATGGGATGACA              GGCCGCG CAA CGCGACC              CGACGGAATCAGTTA  77 34
        ibpB 3900430 .. 3900451 - -17.3  -5.24129   TCGTGGCACAAAAAA           GCCCCGCCA TCTC TGGCGGGGC            AAGGCAAGGAGCTCA 100 41
CYD39_RS19015 3898612 .. 3898625 -  -9.5  -2.66274   GGCCGGATAAGCAAC               GCGCC ATCA GGCGC                TAACCCATTCCCCAA  68 25
CYD39_RS19010 NONE
CYD39_RS19005 NONE
CYD39_RS19000 3896894 .. 3896920 -  -8.7  -3.54424   GCTCAGTGCCGGAAA        GACGGCTGCGCC ATCC GGCAC-GCCATC         GCCTGATGGCGCTAC  71 60
        dsdC NONE
CYD39_RS18980 3891391 .. 3891408 -  -5.5  -4.42386   TCGCCAGCTATAAAA             CGCTGTT TGGC AACGGCG              CATTTAACTGTTATC  70 515
        ivbL 3888759 .. 3888783 - -10.7  -5.63517   GTCTTAAACAAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 52
        ilvB NONE
        ilvN 3886448 .. 3886478 -  -5.4  -2.73159   TCAATCCGCGCAAAG       TGTTTATTTCCGCC AGC GGCGTACATGAACA       TTTTGGCGTGAGCTG  47 268
        rbsK NONE
        fucP NONE
CYD39_RS18925 3882281 .. 3882305 - -12.2  -5.96219   GATGGATAAAAAAAA          CGCGCTTACC TTAAC GATAAGCGCG          CGGCTGTTCAAGCCT 100 48
        uhpA NONE
        uhpB 3880171 .. 3880183 -  -5.5  -3.27525   CTTCCTTAAACGTAA                CGCTG GGG CAACG                AGACGCTCACCCGCG  54 3
CYD39_RS18910 3878745 .. 3878770 -  -2.5  -4.37534   AAATCCACAGGAAAA         GTGGCCTGCGAC AGC GTC-CAGGCAAA         ACCGGGAAAATTTCT  60 78
        uhpT 3877247 .. 3877265 - -13.1  -5.31456   GCAAGGCATAAAAAA             GCCCGGC GTTAA GCCGGGC             AAAACGTTACCAAAT 100 49
CYD39_RS18900 3876416 .. 3876443 - -12.9  -2.94356   TTCAAAACAAGATCA        CATTTCCGTGA TATATG TCACGGAAATG         ATGAGCTATAAGCCT  86 226
CYD39_RS18895 NONE
CYD39_RS18890 NONE
CYD39_RS18885 3874774 .. 3874786 -  -3.3   -2.8552   TTTTATTTATGAAAT                CAGGC TTG GCCTT                TAAGGATTGAAACTA  44 12
CYD39_RS18880 NONE
CYD39_RS18875 NONE
CYD39_RS18870 NONE
CYD39_RS18865 3870264 .. 3870284 -  -9.1  -4.35327   TCAGCAAAAACTAAA            TTCAAAAGC CCT GCCTTTGAA            GCGATTCATAGCGCG  84 401
        nepI 3868388 .. 3868406 -    -3  -5.42259   GCACGGTGAAAAAAA             GCGGAGAA TGG TTTGCCGC             CACCGCAGAGCATAA  84 113
        dagR 3863520 .. 3863568 - -15.4  -2.58822   GGGCCTACAGAACAC TCCCGTTAGGCCGGATAA-GGCG TTTA CGCCGCTATCCGGCCTAACGCAT CATCAGAAGAGCAAA  93 115
CYD39_RS18830 NONE
CYD39_RS18825 NONE
CYD39_RS18820 NONE
CYD39_RS18815 NONE
        dgaE NONE
CYD39_RS18805 3858763 .. 3858786 -  -8.8  -2.78049   ATTCAGGAAAATTTA          CCCCTGCGAG GAGG CTCGAAAGGG           AATCACTGACGGCTG  64 162
CYD39_RS18800 3857426 .. 3857436 -  -6.8  -3.62054   ACGCTAAAGAAGGAA                 CGCA CTT TGCG                 GTGAGCGGCAGTCTG  62 335
CYD39_RS18790 NONE
        mgtA NONE
        mgtR 3852374 .. 3852386 -  -5.5  -4.33274   GGGATACCATGAAAA                TAGCG CCC CGCCA                TAAAAAGAACAACTA  70 179
CYD39_RS18775 3851633 .. 3851653 - -14.1  -3.57561   CCTGAAGCGGCTAAA            TAGCCCCAT TTA ATGGGGCTA            TTTTACTTGCCATTT 100 211
CYD39_RS18765 NONE
CYD39_RS18760 NONE
CYD39_RS18755 3848737 .. 3848755 - -14.6  -3.27902   TCAGGTAACAACAGA             GCCGCTGA TCT TCAGCGGC             TTTTACCCGGAAACG 100 84
CYD39_RS18735 3842313 .. 3842336 - -10.3   -3.8211   TTTTATTGATAATAA          GCGTACCGA AAAATA TCGGCACGC           ATGCTCGCATGACAA  80 73
CYD39_RS18730 NONE
CYD39_RS18725 NONE
CYD39_RS18720 NONE
CYD39_RS18715 NONE
CYD39_RS18710 NONE
CYD39_RS18705 3835688 .. 3835721 -  -9.1  -3.61983   GGAATTTATATACAA     TAAAGA-GGTCATTCA TAC CGAACGACCATCTTTA     TGAAAAAGATCTAAC  75 97
CYD39_RS18690 NONE
        yicI 3830477 .. 3830492 -    -6  -3.30124   TTGTAGGCCGGATAA              GCGCAG CTCA CGGCGC               CATCCGGCGATTCAG  59 43
        gltS NONE
CYD39_RS18665 3824642 .. 3824663 -  -5.8  -3.85698   GTGCTGCTCTATAAA           TCGCCGTT GTCGAA AACGGCGC            AGAAGCGTTTACAGG  63 291
        ligB 3816827 .. 3816841 -  -5.6  -2.87211   ATTGGCGCTCAGATA               GCCCTT GAT ATGGGC               GAAGGGCCAATTATC  49 304
CYD39_RS18620 3814190 .. 3814208 -  -2.4  -5.45652   ATTCTGAAGAAAAAA            GA-GGCG GTAGGT CGCCGTC             TGGACTTCATGATGC  85 215
CYD39_RS18610 3812619 .. 3812636 - -11.3  -5.96219   TACGGACAAAAAAAA             GGCGACT TTTC AGTCGCC              TTAAAATCAATTTTC 100 32
        pyrE 3811497 .. 3811524 -    -4  -5.69023   AAAAGATGAAAAAAA        CACCAGCACGCG TTTG CGCCTGATTGTG         TTGCTGATTCTGGGT  91 424
CYD39_RS18585 3808618 .. 3808631 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAT GGATC                GCGCAAAGAATCTTA  72 38
        rpmB NONE
        rpmG 3807963 .. 3807978 -  -8.2  -5.86976   CCAGAAAACAAAAAA              CCCCGC CGAA GCGAGG               TTTTTGTTACATCAA 100 49
        mutM 3806906 .. 3806920 -  -4.2  -2.55351   TTGGCGCATATGAAT               CGCCAT CTG ATGCCG               CAACTGGAAAGCGTT  44 200
        rfaQ NONE
CYD39_RS18550 NONE
        rfaP 3801598 .. 3801610 -  -2.7  -4.23758   ACCCCAGAGTTAAAA                CCTTA ATC TAAAG                ACTTTAGATATTAAA  58 327
        waaB NONE
        waaO NONE
        rfaJ NONE
        rfaY NONE
        waaZ 3796732 .. 3796750 -  -5.3  -5.01422   TTATACAAAAAGAAA            TGCG-TGC CGAA GCAACGCA             AAATAATGATTTATC  77 47
CYD39_RS18510 3795476 .. 3795505 - -13.7  -5.51046   GAAATAGATAAAAAA       CGCGCTGATAC TTATTACG GTATCAGCGCG        TTTTTCATCATCCGG 100 47
         kbl NONE
CYD39_RS18480 3788774 .. 3788794 -    -9   -5.4505   TTCCCTAACAAAAAA            GGTTGGCG AATGA CACCAACC            TTTTACGATGAAACG 100 80
CYD39_RS18475 3787376 .. 3787388 -  -3.3  -5.09426   TGCAAGCCGAAAAAA                CCGCT GCA ACCGG                TCTACGCTACGCGCT  76 146
CYD39_RS18455 3783033 .. 3783051 -  -3.9  -3.13772   ACGTCATGAAAACGA            CG-GGTAA TCAC TTACCGCG             CACCAGAGGCAGATT  48 14
        grxC 3782714 .. 3782728 -  -3.5  -3.14878   CGCCTTAACGCAACA               GCGGA TCCAG TCCAC               CACGCGCATCCAGCG  46 0
        secB NONE
        gpsA 3781120 .. 3781149 - -10.1  -4.39426   CAGACGGGCAGAAAA       CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG       TTTATGCAAACAGTT  87 49
        cysE 3779793 .. 3779816 -    -3  -3.53224   GACTGGCTGCTCAAA          CGCGGCTATA GCCT TACCGTCGCG           CGGAAGCTGCCTGTT  49 483
CYD39_RS18420 3775872 .. 3775886 -  -4.2   -3.4072   TACCTGGGATGATAA               GCGC TTACGCC GCGC               AGGGCTGGACTATCA  51 427
CYD39_RS18380 3765041 .. 3765069 -    -3  -2.75535   CGAAGAGCTGAATCA        CGACGGCAATGA GTACG CCTTTACCGACG        ATGAAATCCTCGGGC  41 229
CYD39_RS18360 NONE
CYD39_RS18355 NONE
CYD39_RS18350 3759275 .. 3759302 - -12.7   -5.4505   TTTGCCAACAAAAAA        GCGGTGCCCAA TGATAG TGGGGCACCGC         TTAGTATGGCTCAGG 100 69
CYD39_RS18345 NONE
CYD39_RS18340 NONE
        selB 3755219 .. 3755245 - -12.4  -5.69262   CCAGAAAAATAAAAA         GCACATCAGG TTCATTT CCTGATGTGC         TTTTTATAAAGCAAC 100 83
CYD39_RS18325 3752121 .. 3752135 -  -4.2  -4.00526   AAGGCGAGAAGCAAA               GCGC CCCAGAT GCGC               AGCATCAGGCGTTGT  60 330
CYD39_RS18315 3749178 .. 3749189 -  -2.2   -3.9941   GGCCCGATAAGCAAA                GCGCC ATC GG-GC                ATTCAGTTTGCAACC  53 68
        yiaJ 3738984 .. 3739005 -  -4.5  -4.02534   ACGCAAACGGACAAA           TTTTGTCAG ATGC CTGATAAAA            CCTGGCGAGCTGTCT  61 40
CYD39_RS18255 3738353 .. 3738363 -    -4  -4.56775   AGGCGGGCGTAAAAA                 TTCT GGC AGAA                 GAGATAGAACGCGCC  69 92
CYD39_RS18240 3733768 .. 3733792 - -17.9   -3.3095   ACAGACGCCTTATAA          GCCGGATAGCG TAA CGCCATCCGGC          ACACAGAATTACATA 100 34
        xylA 3730801 .. 3730828 -  -9.8  -2.78679   TTCCTTTACTGAAAG        CGCCCGGC-AGCG CTA CGCTTACCGGGCT        AATCACGACTACAGG  69 74
        xylB 3729290 .. 3729315 - -10.5  -3.61922   AATATTTACGGGAAA         TGCCTTTCAGC CAAA ACCGAAAGGCA          TTCTGACTTATGACA  78 33
CYD39_RS18220 3728780 .. 3728797 -  -9.9  -3.61609   TTAGCTAAACGACAA             TGATGGC TCCG GCCATCA              TTCATCATCACTGTA  77 23
CYD39_RS18210 NONE
CYD39_RS18205 3727269 .. 3727285 -  -5.1  -3.10597   TTGTTTAGCGAAAAT              TGCCG GATTTCG CGGCA              TCACACCTCACCAGG  51 49
        glyQ NONE
        glyS 3724142 .. 3724157 -  -6.8    -5.626   TATGTTATAAAAAAA              CCTGCC CGAA AGCAGG               TTTTTTTTAATTAAC 100 48
CYD39_RS18190 NONE
CYD39_RS18185 3723150 .. 3723162 -  -4.1  -4.38712   CTGATTTTCATAAAA                CCTCA TTG TGAGA                GTTACTTGTAGAACA  64 150
CYD39_RS18180 3722641 .. 3722687 -  -2.4  -3.65522   TACTGAGTTCAACAA GGCAAAAGAACAATGCTGCCT TTCTGC AGGCTG-ACTATTATTTCGCC AAACATTTCCTCATC  49 16
CYD39_RS18175 NONE
CYD39_RS18170 3721374 .. 3721402 -  -8.9  -5.44721   ATTACGTTAAAAAAA        TGCCCGATAAC ATAATGG GTTATCGGGCC        TATAAAACGCCAACA 100 363
CYD39_RS18150 3718638 .. 3718670 -  -7.6  -4.04089   AAAAATAGAGAAGAA      CTGCGTCAACCCGC AGGCG GCGGGATAACGCTA      CAGGCCCGATAAGCG  72 70
CYD39_RS18135 3714084 .. 3714107 -  -2.5  -3.81741   AATGGACAACTGAAA         GGCTTCGTCAG CGTA CTG--GAAGCC          CGTTTTGTCGGGGCG  52 231
CYD39_RS18120 3712281 .. 3712307 -  -5.1  -5.27335   TGTGCTAAATAAAAA         TAAAGAGCACC AAATG GGTGCGCTGTA         CGCCTGGTGTTGCAT  82 202
        lpfA 3711388 .. 3711410 - -13.5  -5.00616   CTCCGCTGGAAAAAA           TGGCAACGG GATTT CCGTTGCCA           TTATGATTGACTGTA 100 56
        lpfB 3710654 .. 3710669 -  -3.2  -4.12599   AATAATCCTTTAAAA              CGTGTT AGTT AACGCG               CTGTGTCAACATGTC  57 14
        lpfC NONE
        lpfD NONE
        lpfE 3706467 .. 3706484 - -12.7  -4.49644   ACTAAAAATGGAAAA             GGGCCAG CGAA CTGGCCC              TCAGTGATTATTCGT 100 33
        eptB NONE
CYD39_RS18085 3704387 .. 3704405 - -14.6  -5.76633   TCAGATACAAAAAAA             CCCTGCTC GTT GAGCAGGG             TTTCTGAATTTGGTC 100 36
CYD39_RS18080 3704218 .. 3704236 - -14.6   -5.4251   TTCAGATACAAAAAA             CCCTGCTC GTT GAGCAGGG             TTTCTGAATTTGGTC 100 36
CYD39_RS18075 3703910 .. 3703927 -  -6.9  -4.19678   CCATACCTGAACAAA             TGCGGGT GGTT ACCCGCT              ATGACGGTATCCGCG  70 192
CYD39_RS18065 3701793 .. 3701818 - -11.1  -5.69023   AAAACATCAAAAAAA         TAACCGCCAGC GCGG GCTGGCGGTCT          GTATTATTTCAACCA 100 29
CYD39_RS18060 3700404 .. 3700424 - -12.6  -4.00411   CAAAATTGTAAATAA            GTAGGCCG TCGTG CGGCCTAC            CGCGATCACAAAAAC 100 40
CYD39_RS18055 3698211 .. 3698234 -  -2.2  -3.86897   TGCATCGCGGATAAA          GCATTACGCC GGAT GGCGCTGCGC           TTATCCGGCCTACAC  53 67
        dppB NONE
        dppC NONE
        dppD NONE
        dppF 3694154 .. 3694165 -  -7.2  -3.30124   GTGTAGGCTTGATAA                GGCG CAGC CGCC                 ATCCGGCATAAAACG  63 44
CYD39_RS18020 3691966 .. 3692005 - -18.6  -3.73775   CTTACCCGCAGTAAA  CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG   GCGCATGTTGCCATT 100 66
CYD39_RS18000 3688075 .. 3688088 -  -2.3  -2.58544   CTGCAGTCCCAGAAT               CGCCA TTCA TGGCT                TCCTTAATGAATGTG  39 18
        bcsQ 3687308 .. 3687350 -  -5.3  -2.57463   AACCGGCGGGATAAG CAGCCACCGGGAAAGGGCG CTCAT CGCAGGCTCCCGGCGGACG TTTTGTCGCCCGCAT  48 3
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC 3677694 .. 3677707 -  -3.7  -2.91199   TAACGGTTAATGATA               GCGTC TGAT GGCGC                TGCGCTTCTCAGGCC  46 77
        hmsP NONE
CYD39_RS17965 3674095 .. 3674120 - -12.6  -3.37259   AATTATGCGCAAACA         CCCGCAGTCC TGGAAG GGACTACGGG          CATAAGTGGCGAGAT  90 40
CYD39_RS17960 3672210 .. 3672223 -  -3.1  -4.32857   CTGCCGAAAGAGAAA               GTGAT AGAC ACCAC                TGCCGCAGGCGACTC  62 230
        pdeH 3670402 .. 3670447 -  -2.5  -3.30658   CCAGACGAAAAAGGA GGATGACCGCGCCTCGTAATAC CAC GTATTACG-GGAACAGTCTGGC GTTACAGGGTCAGAA  46 27
CYD39_RS17945 3668242 .. 3668269 - -11.2  -3.02144   TCAGGCGTTGTAATA        GGGCGCCGGATG GCAT CATCCGGCGCTA         CGTTTCACGTTACTG  79 35
CYD39_RS17925 3663022 .. 3663042 -  -5.3  -3.72695   ATCGCGTTTATTAAA            CAGTGGCAG GGT CTGTCGCTG            GAAAAGTATCGCGAT  58 316
CYD39_RS17915 3660889 .. 3660913 -  -7.1  -2.79183   TGTATGGCGACGATA          TGCTGGGCGAT GAA ATCGCCCATAA          CTGGTTAAAAACAGT  52 213
CYD39_RS17905 3658336 .. 3658360 - -11.5  -6.02546   GGAAACCAAAAAAAA          TCGGGATCC GCGATCT GGATCCCGA          TTCAGCCTGCTCTTC 100 59
CYD39_RS17900 NONE
CYD39_RS17895 NONE
CYD39_RS17890 NONE
CYD39_RS17885 3653813 .. 3653848 - -13.3  -3.03441   GACCATGCGTTAAGA    TCTTGTGCGCCCATC TTCGAG GGTGGGCGCACAAGC     CTGCATGATTAATAC  86 34
CYD39_RS17865 3649885 .. 3649898 -  -5.2  -3.90489   TAAAAAAGAAATGAA               GCGC TCTATC GCGC                TTTCGCTATGGATCT  61 143
        prlC 3647793 .. 3647815 -    -2  -3.18264   CGTTTCATCCATTAA           GCAGATTT GCACGTA AAATCAGC           CTTTAATCCCGTAAT  44 21
        rsmJ 3646935 .. 3646970 -  -4.6  -3.20494   ACCGAATGATTAATA    CGCCAGGCACCGAACA GTAA TACTCAGTGCCGGATG     CGGCTTACGCCTTAT  50 101
        uspB 3643868 .. 3643898 - -11.9   -2.8585   TTATTTAAGCCAAAT      GGGCCGGA-TAGCG CTGT CGCTAATCCGGCCT       GTCAGGATGAAACGA  80 127
CYD39_RS17830 3640679 .. 3640702 -  -5.8  -2.91395   ATGCGTGTCACAAAG          TCCGCCGGGC GTGC GCTCAGCGGG           GGTTTCCATTCGGGA  51 260
CYD39_RS17825 NONE
CYD39_RS17820 NONE
CYD39_RS17815 3635613 .. 3635623 -  -8.2  -3.50555   CCGAAAGAAGACTAA                 CGCC GGG GGCG                 CTTCGCTTGCCCGGC  67 104
CYD39_RS17795 3631608 .. 3631630 -  -8.3   -4.6391   AACAACGATACAAAA           GCGTCGGCA GAAAG CGCCGCCGC           AGAAAGCCAGGCCTC  87 486
        tusA 3630167 .. 3630203 -  -3.6   -4.2828   CGTGACGCAGCAAAA   CGCC-TCGCTGGTAGAGG AAT CCGC-AGCAGCGGCGGCG   GCGCTGGAAGATCAG  64 199
CYD39_RS17760 3624695 .. 3624708 -  -3.7   -4.1196   AAGCGAGGTGGAAAA               CGGTC TGCC GCCCG                TTCCGGCGAACTGGG  60 404
        ftsY NONE
        ftsE NONE
        ftsX 3620830 .. 3620846 -    -8  -3.68024   GCGGGGAAGAGACAA              CAGGGA CTCTT TCCCTG              CGAACGGAAGCCCAT  69 69
        rpoH 3619747 .. 3619768 - -10.9  -5.49579   CTACAAAAAACAAAA           CCCCCGAAT TCAC ATTCGAGGG            TTCATTGGCAACTCG 100 47
CYD39_RS17725 3618249 .. 3618275 -  -8.7  -4.66535   AAGCGCTAAAAGAAA        GCCGGAT-GGCG CTGA CGCTTATCCGGC         CTACATGCCGGGAGC  89 115
        livk 3616287 .. 3616305 - -13.1  -2.73159   GTAACCTTTTTAAAC             CCGCCCG GCGTG CGGGCGG             TGGGATAACTTATCT  85 48
        livH NONE
CYD39_RS17705 3614061 .. 3614074 -  -3.1  -2.78867   TTAACCGCTAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCC  43 19
        livG NONE
        livF 3612582 .. 3612610 -    -6  -3.57462   GATGGCAGCTGTAAA       CTGCGCCTTATCC GCCC AGAT-AGGCGCTG        CGCACCGCTTCGTTC  62 4
CYD39_RS17690 3612003 .. 3612029 -  -2.4  -5.04175   CGAATGACAGAAAAA         TAACTTTTTTAT TAC AAAAAAAAGATA         GTAAGGCGACAGAGA  71 143
        ugpB 3610536 .. 3610572 - -13.1  -2.71011   ATGGCGGTGCAAGCA    CCTTATCCGGCCTACAA ACG CTGTAGGCCTGATAAGC    GCAGCGCCACCAGGC  85 51
        ugpA NONE
        ugpE NONE
CYD39_RS17670 NONE
        ugpQ 3606865 .. 3606875 -  -6.8  -3.60296   CAGCGGCAGCGGAAA                 TCCG GAC CGGA                 TGCTAAACCATTCCC  60 105
CYD39_RS17655 3604640 .. 3604660 - -16.9  -3.39028   CATAATCTGCAAATA            GCCCGGTGT CTG ACACCGGGC            CTGGAATTAAAAATC 100 39
CYD39_RS17625 NONE
CYD39_RS17620 3597453 .. 3597485 -  -4.8  -4.40993   GACAAACGATGAAAA     GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC      CTACAAAGGGCTACA  68 46
        gntR 3596244 .. 3596255 -  -3.6  -3.53444   TTAGTCGTGCTCAAA                GCGG GCCC CCAC                 TCTACAAGTTGCAAA  50 151
        gntK NONE
        gntU 3594282 .. 3594307 -  -6.2  -5.80364   ACCTCAATAAAAAAA        CCGGGT-A-GCG ATTA CGCCTTACCCGG         CTTACGGTGTCGATC 100 90
         asd 3592729 .. 3592744 -  -6.1  -5.82316   ATTACGCAAAAAAAA              GGGTG ACGATG CACCC               CTGGTTTAACACAAA 100 123
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
CYD39_RS17570 3583089 .. 3583106 - -14.1  -5.32882   TACCACGATAAAAAA             CGGGGCC GTTT GGCCCCG              TTCTCAAGCGTTAAA 100 44
CYD39_RS17565 3582161 .. 3582177 - -10.8  -3.80461   TAAGCGATGACGAAA              GCGGGC TTCTT GCCCGC              TATGTCTTTTTATTT  85 40
CYD39_RS17545 3576652 .. 3576685 -  -5.9  -2.84103   AAAACATTCACGATA     GCGGCAGACAGAAGT TGAA AGTTCCGGCTGCCGT      TTTTTATTTACAGTC  51 46
CYD39_RS17540 NONE
CYD39_RS17535 3574456 .. 3574466 -  -2.4  -4.63218   GGCGTCGTAATAAAA                 TCCG GGG CGGT                 TTATACCGCCCTTTT  64 56
        glpE NONE
        glpG 3571485 .. 3571506 -  -5.9  -4.56597   CCCGGCCTGGAAAAA           TATCTCGACC ACA GGCCG-GATA           CGCCTCACGTTCGTT  72 30
CYD39_RS17515 3570255 .. 3570265 -  -8.2   -3.1855   CGTTTTAATACCGAA                 GCGC GCC GCGC                 CTGGCTGAGCTTCGC  62 419
CYD39_RS17505 3567220 .. 3567233 -  -3.8  -3.48276   CGTCTGGCCATACAA               GGTG TAGATC CACC                AGCATTCGTGCCTTC  52 128
CYD39_RS17500 NONE
        rtcA NONE
CYD39_RS17490 3563830 .. 3563844 -  -7.8  -2.70932   GCGCCTGCTTAACCA               TCCGGA TGT CCCGGA               GCTTATTCGCACCAG  55 360
        malP NONE
        malQ 3556261 .. 3556278 - -14.1  -3.99324   TCTCACCATCATAAA             GCCGGGG AAAT CCCCGGC              TTTATTACTTCTTCT 100 30
        bioH 3552042 .. 3552071 -  -7.1  -2.90075   GTTTGTTTAATTACA       TGATGCACACTGGC GAC GCC-GCGCGCTTCA       ATACGTTTATCCGCC  53 300
        ompR 3544011 .. 3544058 -  -4.8  -3.18023   TGACGATGAGCAACA GCGTGCGGGCAAATGAACTTCGC GGC GAGAAGCGCATTCGC-CTCATGC TTTAGAACCGTCCGG  52 20
        envZ 3542678 .. 3542703 - -13.4  -3.63694   ATCCAGCGTTAAGAA         GAAAGGGAGG GTAATA CCTCCCTTTC          TTATGCCTCTTTTGT 100 26
CYD39_RS17405 3538883 .. 3538913 - -10.5  -2.72471   TGTTCAGGATACAAG      GCCGGATAA-GGCA TTTA TGCCGCCATCCGGC       AAAAAGCTTACTCGT  71 33
CYD39_RS17400 3537618 .. 3537632 -  -4.3  -3.32844   CCTTTCAGTCGACAA               CATCA TTGCC TGATG               GCGCTGCGCTTATCT  52 80
        nudE 3532446 .. 3532459 -  -9.5  -5.14563   GTTCTGATCAAAAAA               GGCGC TCCG GCGCC                TTTTTTATTGTGTTT  93 99
CYD39_RS17365 NONE
CYD39_RS17360 3528453 .. 3528466 -  -3.7  -3.53419   ACCAGATATCAAAGA               GCGCG TTCA CGGGC                GGCGCTCCTCGTTAA  52 5
CYD39_RS17355 NONE
CYD39_RS17350 NONE
        hofQ 3526316 .. 3526331 -  -7.6  -2.84878   TTCGGCAAGGCAAAG              CGCATT AATC AATGCG               TAAGCAACGAAAAGC  59 139
        aroK NONE
        aroB 3524274 .. 3524298 -  -5.8  -4.28432   AACCTGAAGCTAAAA          GACTGACATC TACGC AATATCAGTC          TGACCTTTCTTGTTG  67 41
        damX 3522777 .. 3522798 -  -6.6  -2.97613   GACTAACTAATTACA           CCTTCTCC GGCTGT GGAGAAAG            CTCCGACAGCATCCT  56 166
CYD39_RS17325 NONE
CYD39_RS17320 NONE
CYD39_RS17315 NONE
        trpS 3519363 .. 3519377 - -11.4  -5.76633   GCAGATACAAAAAAA               CCGGGA TTT TCCCGG               TTTTTTTACAGGTCT 100 127
CYD39_RS17295 3511226 .. 3511246 -  -3.9  -4.36914   TGCGCTGGTAGAAAA            CGGTACCTC TGT GAAGCAACG            CGTCGTCCACGGTGT  64 152
        ppiA 3503804 .. 3503824 - -15.4  -4.46155   GAGACAGGGAGAAAA            CGCGGGCG GCTCG CGCCCGCG            CAGGCATGTTTTATG 100 36
CYD39_RS17260 NONE
CYD39_RS17255 NONE
        pabA 3502330 .. 3502342 -  -2.7  -3.61609   CCAGTGAAATTATAA                TCACA AAA TATGA                ATAAAAAATCACTCA  50 55
CYD39_RS17245 3501027 .. 3501067 - -12.5  -3.50684   GATACAAAAAGTTAA  GACCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCCGCC  ATCAGGCCACCACCT  93 27
CYD39_RS17230 3497463 .. 3497488 -  -9.7  -2.72461   TAACCGCGGTGAAAT         GCCCGAT-GGCG CTA CGCTTATCGGGC         CTACGAGATAAAAAC  69 83
CYD39_RS17210 3494693 .. 3494714 -  -5.7  -2.89797   CCGGTATAAAGATTA           CCGTTGCGG TCGG CAGCACCGG            AACAGAAGCCTGCGT  51 49
        kefG NONE
        kefB NONE
CYD39_RS17185 NONE
CYD39_RS17180 3488751 .. 3488765 -  -8.5  -5.90981   TGAGACGAAAAAAAA               GCGGG GATAA CCCGC               TTTTTTTGTGCCCGA 100 187
        fkpA 3487450 .. 3487471 -   -13  -6.09888   CCTGAATAAAAAAAA           CCGCCGCT ATTACA AGCGGCGG            CTCTCAGTTTTTATT 100 36
CYD39_RS17165 NONE
        tusD 3486091 .. 3486103 -  -2.7  -2.53748   AGACAAATGCAATAC                GTTTC ATT AAAAC                TGCACCACCCGATCG  40 19
        tusC NONE
        tusB 3485368 .. 3485390 - -10.6   -4.7268   AAACACGTAATAAAA           CGCCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG  95 81
        rpsL NONE
        rpsG 3484331 .. 3484354 -  -8.9  -4.21275   TTAAGTTATCCAAAA          CGGGCGACTT ACCTG AAG-CGCCCG          CCTGGTGACTATGAC  82 51
        fusA 3482117 .. 3482142 - -13.3  -2.78935   ATATTCCTTACTATA         GCGCTCTCCCC TTCA GGAGAGAGCAC          GGGATTTTGGTTTTT  85 52
         tuf 3480868 .. 3480883 - -11.8  -5.11063   AGCAGGCAACAAAAA              GGGCGC CGAA GCGCCC               TCTTCAATTCAAAAC 100 55
CYD39_RS17125 3480525 .. 3480535 -  -5.4  -5.78622   GGATGTCAAAAAAAA                 GAGT GTG ACTC                 AGGCGATCTCTTTAA 100 24
CYD39_RS17120 3479960 .. 3479982 -  -5.7  -2.52623   CGGGTTTCATAACAG          GT-TGGAAAG TTTT CTTTCCAGAC           GGTTAATCGGTAACC  49 28
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 3474137 .. 3474162 - -12.7    -5.252   TATGGGTAGAAAAAA         TAAACGGCCCA TCGC TGAGCCGTTTA          TTCGTTGAGAATGCG 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 3471122 .. 3471132 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 3468431 .. 3468460 - -12.3   -4.6645   TACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 55
        rpsM NONE
        rpsK 3467574 .. 3467592 -  -4.4  -4.15508   AACTAACCTGGAAAA             CGAAGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  64 14
        rpsD 3466924 .. 3466942 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  74 10
        rpoA NONE
        rplQ 3465454 .. 3465467 -  -9.5    -5.626   GAGGGTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTTACGTTACT 100 46
CYD39_RS16970 NONE
        zntR 3464544 .. 3464565 -  -5.8  -3.61244   GATTGTATAAATTAA           CGGCGCGAG TGTAG CCC-CGCCG           GTTCAATAAATCAAC  59 36
CYD39_RS16960 3464218 .. 3464252 -  -2.1  -5.09426   CTCAACCGTAAAAAA    GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA     AGAGGAAGTGTTATT  74 22
        dprA NONE
CYD39_RS16925 NONE
CYD39_RS16920 NONE
        tsaC NONE
        aroE NONE
CYD39_RS16905 3455537 .. 3455575 -    -8  -4.08767   GGCAGTCCGGTAAAA   CAGATCCGCCCCCTGAGC GAT GCTGAGAGATCGGGCCTG   CAGTACTCCGCCAAT  77 73
CYD39_RS16895 3453044 .. 3453057 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
CYD39_RS16890 3452846 .. 3452881 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAGGGCAGGTGACT  79 61
CYD39_RS16885 3449730 .. 3449741 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf NONE
CYD39_RS16875 NONE
         rrf 3449326 .. 3449347 - -10.1  -4.85433   AGATAAATGCAAAAA           GGCCCAGTC TTTC GATTGGGCC            CTTTGCTTTATTTGA  91 42
        envR 3442745 .. 3442762 -  -4.1  -3.63968   GGCGAAAGCGTTAAA             TCTGCAA ATTG TGGCAGA              AGGGGTAGAAAATGA  53 194
CYD39_RS16790 3432416 .. 3432449 -  -3.3  -3.18274   TTGACCTCAACGCAA     TTTGCGCAGCGT AAATTGGGCAA ACGCTG-GCAAA     CACTGCATAACGTCG  45 248
        csrD 3427590 .. 3427617 -  -5.6  -3.85698   TTCCTTTGTTACAAA        TCTCGGC-CTGAG TCC CTCAGGGCTGAAA        AAATCAGCAGCAATC  61 172
CYD39_RS16765 3426416 .. 3426430 -  -2.8  -2.75064   GCCCGTATCCAACTA               CTCTTC GCT GAACAG               GTCGCCGCCGTGCAT  41 8
        mreC NONE
        mreD NONE
CYD39_RS16750 NONE
CYD39_RS16745 NONE
CYD39_RS16740 NONE
        tldD 3417016 .. 3417029 -  -5.3  -3.96999   TTACACCGAAAAAGA               TAAGC TGCC GCTTA                AAGTGCAGGTAGTGA  63 239
CYD39_RS16725 NONE
        aaeA NONE
        aaeB 3412865 .. 3412883 -  -8.1  -5.65177   ATAGTCATAAAAAAA             CCGACGC TTTTG GCATCGG             TTCTTGTGGGTTAGC 100 36
CYD39_RS16710 3412216 .. 3412232 -  -4.3  -3.06261   GGTCAACGCGGAACA              GGCGCAG AAT CTGCAAC              CGATGGGCACCATTT  47 243
         mdh 3409533 .. 3409552 - -12.8  -3.98913   TTTACAGTCAAAGAA            GCCGGAGC AAAA GCCCCGGC             ATCGGGCAGGAACAG 100 42
CYD39_RS16685 NONE
CYD39_RS16680 NONE
CYD39_RS16675 3406679 .. 3406697 -  -4.5   -2.5474   CCTTAGTCAGAACAG             CTTCCGT TAATT ACGGATG             AAAAGGGAAAAGGAT  46 17
        ttdA 3405765 .. 3405778 -  -2.4  -2.98447   TTAGTCATCAGAAAT               TCAC TCCGCT GTGA                GACGTAATGGTGTAA  41 4
        ttdB 3404990 .. 3405006 -  -3.6  -3.82519   ATTAGTCATAAAATA              GCCTTC AGGCA GGAGGC              ACGATAATGGGGCTA  53 159
CYD39_RS16660 NONE
        oadA NONE
CYD39_RS16650 NONE
CYD39_RS16645 3400857 .. 3400879 -   -12   -4.4078   GGCGTCGAACTAAAA           CGACGCGG CTTTTGC CCGCGTCG           TTCGACGGCTAGTCA  95 34
CYD39_RS16625 3396271 .. 3396292 -  -3.8  -2.87132   TTTGGCCGGCACAGA           GAAAGTTT GGGAAA AAACTCTC            TTGTAACGTGGGGTC  46 185
        rplM NONE
        rpsI 3395262 .. 3395275 -  -9.5  -5.60993   TTGCCCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGCTAACAG 100 64
        sspA NONE
        sspB 3393833 .. 3393850 - -12.7  -4.88918   GGAGGCCAAACAAAA             CAGGCCC TTCA GGGCCTG              TTGATTATTTTACTA 100 30
        nanR 3392901 .. 3392923 -  -4.8  -3.60925   AAGCAGCAAATAATA           CAGAACGC TTATAGT GCGATCTG           CTTCACTAAACTGGG  57 57
        nanA NONE
        nanT 3390293 .. 3390315 - -16.4  -3.52113   ACTCCCTTACAAATA           TTGCCCGGTT GAA AACCGGGCAA           GCGGATTAACTTTTC 100 31
CYD39_RS16585 NONE
CYD39_RS16580 NONE
CYD39_RS16575 3387964 .. 3387979 -  -3.2  -4.64766   CCCACAGCGCAAAAA              CCCTGC ATTT ACAGGA               CTACGGTCTGAGCGT  67 295
CYD39_RS16545 3376709 .. 3376734 -  -8.3  -2.60813   TATTGTGCGAAATAT         GCGTAGCGC CCCTCATC ACGCTACGC          TACAGGTGGTATCCA  63 20
        arcB 3374235 .. 3374251 -  -2.1  -3.86266   ACATCATCATAATAA              GCACGGC GCA GCCACGA              TTTCCCTGGTGTTGG  53 73
        elbB NONE
        mtgA 3372668 .. 3372679 -  -7.2  -3.30124   TCGCAGGCCGGATAA                GGCG TTCG CGCC                 GCTAATCGGCAAAAT  63 40
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 3360350 .. 3360365 -    -9   -2.9911   ATAAGCAAAAGATTA              CGCTGA TAAA TCAGCG               CGGTAAAAGTGCCGG  68 117
        ibaG NONE
        murA 3358656 .. 3358685 - -14.4  -4.58283   TAAGCGCCTGAAAAA       TAACCCCCGCAA TCGCGT TCGCGGGGGTTA        TTCAGCGTACAGAAG 100 42
        rplU NONE
CYD39_RS16415 3356257 .. 3356277 -   -14  -4.75174   CATCGAATGTAAAAA            GCCCCGCA ACAGG TGCGGGGC            TTTCATCCGTTACCG 100 54
CYD39_RS16410 NONE
CYD39_RS16405 3353956 .. 3353975 - -16.4  -4.86822   AAGGACATAATAAAA            CGGGCCGC AAAT GCGGCCCG             TTGGCTTTTGTAGAC 100 73
        greA 3351672 .. 3351686 - -12.8  -4.36914   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 74
        rlmE 3350460 .. 3350474 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  46 84
        ftsH 3348436 .. 3348455 - -12.8  -5.75538   GTTAAAAAAGAAAAA            CCCCGGGG CAAG CCCCAGGG             TTTCGGTGAGCGCTA 100 65
        folP NONE
        glmM 3346092 .. 3346106 -  -5.7  -4.00469   TGAATACTAACCAAA               GCGAA TGACC TTCGC               AAGGGCAATTTAAGC  63 132
        secG NONE
CYD39_RS16360 3345527 .. 3345542 -    -9  -5.62219   AACAGACGAAAAAAA              GACGCT TTTC AGCGTC               TCTTTTCTGGAATAT 100 41
CYD39_RS16355 3344095 .. 3344110 - -11.8  -3.08679   GTCGTTGATGCAACA              GGCCGC GAAA GCGGCC               TTTTTTGTGAATATC  81 74
CYD39_RS16345 3342168 .. 3342183 - -10.4  -5.60689   TCAGATAACAAAAAA              CCCCGA TAAA TCGGGG               CTTTAGATAACTGAA 100 152
        rimP NONE
        nusA NONE
        infB 3337226 .. 3337240 -  -9.2  -5.61913   AATAAAGACAAAAAA               GGGGCC ATA AGCCCC               TTTTTAAATTTCTTG 100 202
        rbfA NONE
        truB 3335787 .. 3335801 -  -2.8  -3.95071   TAAACTGTTAAATAA               TTTACG CGA CGTTAA               GCGGCGGTATTCTAC  54 75
        rpsO 3335392 .. 3335408 - -10.8  -5.00884   ATCTGCTGGAAAAAA              GGGGCC ATGAA GGCCCC              CTCTTTCTGAAACTC 100 48
         pnp 3333022 .. 3333042 - -18.3  -3.57792   CCAGCCAGGTCTAAA            GCCCTCCGC ACT GCGGAGGGC            AAAAGGCTACCTTAC 100 37
        nlpI 3332001 .. 3332026 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GCGA AGGTGATGGCA          ATCAAAAAGATTACG  72 59
        yrbN NONE
CYD39_RS16295 3329926 .. 3329948 - -13.4  -6.11392   AAAGAAATAAAAAAA           GCCCCGATTG TGA CGATCGGGGC           TGTATATTTTACTTT 100 69
CYD39_RS16290 3328559 .. 3328585 - -13.1  -2.61144   GGACTTGTGAAATAT         TGCCGGATGAA AACAG CTCATCCGGCA         CAATAACGTTACTGG  84 34
CYD39_RS16280 3327009 .. 3327043 -  -8.4  -3.69354   GGTGATAAGGCGAAA     GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC     CCAGGCGGATGAAAT  68 106
CYD39_RS16260 NONE
CYD39_RS16255 3322757 .. 3322793 -  -5.9  -3.75169   GAGTATCGCATCAAA   CAGCTCACAAAGCGCC AGAAGG AGCGCCTTGTGA-CGG    AACGCGAAGCGTTTG  60 74
CYD39_RS16245 3321700 .. 3321717 -  -3.3  -5.72207   GTGAAAGGAAAAAAA             GGCGAGG CCAG CGTCACC              ATTGATAAGGCTATT  89 365
CYD39_RS16235 3320727 .. 3320738 -  -7.2  -3.43338   ACGTATATTAAGTAA                CCGG TGTG CCGG                 GTGGCGATAAGAATG  65 80
        rsmI 3315830 .. 3315840 -  -3.2  -3.89822   CATTGATGCGACAAA                 CGGT ATT ACCA                 CGTTTAACGAAGGTT  54 392
        garL NONE
CYD39_RS16160 3305592 .. 3305620 - -10.2  -2.64803   CCAGCCTGAAATTCA        GGCCCGGATCGC TACAC GCCATCCGGGCA        CAACGTCGTTAGCGA  70 34
        garK NONE
        rnpB 3303955 .. 3303968 -  -9.5   -5.0925   CTGTAAAAGCAAAAA               CCCGC CGAA GCGGG                TTTTATGAAGAAGTG  93 36
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        pflB 3295917 .. 3295956 -  -2.7  -3.08798   ACCGTTCAGTGAAGA  TCCGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACGTT  ACATCGCCTGAGTAA  43 24
        tdcG 3294441 .. 3294460 -   -15  -5.58179   TATCACAACAAAAAA            GGGCGCAC TTTG GTGCGCCC             TTTTCTCAACTTCTG 100 86
CYD39_RS16115 NONE
CYD39_RS16110 3291303 .. 3291315 -  -5.5  -4.07885   CAGCCCGTGGTAAAA                CCTGC CGT ACAGG                AGGCGATGAGCGCCA  65 248
CYD39_RS16095 3289521 .. 3289531 -  -8.2  -3.53012   GGCGCCGCTTTTAAA                 GCGC CGC GCGC                 TATTTATTTTCCGGC  67 29
        rlmG 3277390 .. 3277406 -  -9.4  -2.66733   GGGGAATTGATACCA              GCCTGC AACAG GCAGGC              GGTCTGCGCCCGGAA  59 499
CYD39_RS16005 3272217 .. 3272252 - -16.3  -2.66316   CCTTCTATCAGAGCA    CATCCGCCCGGTAAGC TTGTT GCT-ACCAGGCGGATG    TCATTACCGTTGCTA 100 54
CYD39_RS16000 3270078 .. 3270092 -  -7.8  -5.40072   GCGGGCGGAAAAAAA               TCGCGA TTA CCGCGA               ACGGCGCGCAATGGC 100 258
CYD39_RS15990 3268631 .. 3268648 - -11.3   -3.5275   AAATCATATAATTAA             GCCACTC TAAA GAGTGGC              TTTTTTGTTTCTGAC  85 59
CYD39_RS15980 3267791 .. 3267808 - -14.1  -3.95073   CCGCACACGTATAAA             CGCCGCC GCAA GGCGGCG              TTTTTTTATCAGGCC 100 112
        tsaD 3261843 .. 3261864 -  -2.1  -3.05384   TCGGCTGGGATTTAA           CCGGCGTCA TGGC TGGCACCTG            GCTGCTGACGGTCCT  42 498
        folB 3260948 .. 3260966 -  -3.1  -3.40051   AAACACTGCAAAAAT             GGATCTC GCGTT AAGACCC             CATATATAACCGTTT  48 69
CYD39_RS15935 3259985 .. 3260016 - -11.6  -3.64822   ACCCCGCCAGCTAAA      CGCCATCCGGCA CGATAAAT TGCCTGATGGCG       CTGCGCTTATCAGAC  87 100
CYD39_RS15920 3256427 .. 3256441 -  -7.1  -3.91984   ATATCCTTTAAATAA               TGCCG GATGG CGGCA               TTTCGCCTGACCCGG  70 106
        glnE 3253566 .. 3253578 -  -5.5  -3.82484   ATAGCATAATTCAAA                CGGCT ACC AGCCA                CTTCCGCCAGCTTGC  61 8
        hldE 3251986 .. 3251999 -  -2.3  -5.76949   TAGGTCGAAAAAAAA               GCAGC GTCA ACCGC                GAGATACGCGTCGAA  91 106
        glgS 3248765 .. 3248792 -  -9.8  -4.90906   CCACAAGAGTAAAAA        CGTGAACGGGCC TGAC GGCCCGCTCATA         TAAGATCTGAATAAT  93 69
        ribB 3247331 .. 3247350 - -12.2  -5.50925   AAGGAATACAAAAAA            GCCGATGA CATC TCATCGGC             TTTTTTCAACCATGA 100 50
CYD39_RS15875 3245909 .. 3245934 - -13.3  -4.20552   AATAGATAAACCAAA         GCAGAGGTCTG CATT CAGGCCTCTGC          TTTTCTCACAATAAT 100 99
        ygiD 3239924 .. 3239942 -  -2.4  -4.08064   AACCGGCCTGGAAAA             GCATTATC TCC AATAAAGC             GTTGTTGCCGCTGTT  56 448
CYD39_RS15830 NONE
CYD39_RS15825 NONE
        cpdA NONE
        yqiA NONE
CYD39_RS15810 3232157 .. 3232176 -  -8.6  -2.94365   GCAGACCGGATAAAG            CGTGCAAC AACC GTTACACG             TCGAGATCCGCGAGA  65 19
CYD39_RS15785 NONE
CYD39_RS15780 3227476 .. 3227512 - -13.8  -2.58822   TGCCGCAGATAATAC    CCTATCTCACGGTCTG AGTCA CAAACCGTGAGCCAGG    TGACGAGGAAGTTAA  86 37
        parC 3225057 .. 3225100 - -13.3  -3.61103   TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG 100 80
        plsC 3224105 .. 3224125 -  -3.9  -4.18762   AAGCTCCATGTAAAA            CAGGCTAAA GAG TTGTGCCTG            AAAAAATGATTTCTA  62 61
        ftsP 3222634 .. 3222669 -  -5.4  -4.07568   GCTCCTTCCTGAAAA    CCCTG-ACGGGTCTG CGCTATT CAGACCCGTACTCGG    ACGCTTTACGACGCT  65 31
CYD39_RS15745 3217019 .. 3217031 -  -4.9  -3.56216   AATTAATTTATACAA                TCAAT AAT ATTGA                AATAAAATATAAATC  56 140
CYD39_RS15740 3216486 .. 3216503 -  -6.9  -4.16016   TGATTCGCGAACAAA             GCGGCAG CCTG CTGGCGC              AAATGCGCACGATAA  72 271
CYD39_RS15695 3205871 .. 3205885 -  -5.6  -2.61912   TGACGTATCCATAAT               CGGCCA GGA TGGCCC               GGTTACGCTTCGTTG  50 62
CYD39_RS15680 NONE
        exbD 3202406 .. 3202433 -  -9.9   -5.4833   TTAGGCAATAAAAAA       GCCGGGT--GGCG ACTT CGCCTTACCCGGC        CTACAGCATCAGCAG 100 46
CYD39_RS15655 3199905 .. 3199920 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAGCCC TAAT GGGATA               GGCTCTAAATCTCAT  62 30
CYD39_RS15650 3198877 .. 3198892 -  -7.6  -2.81055   GAATATAAGAGATTA              GTCATC AGAC GATGAC               GCACTCTCGTTATCG  58 286
CYD39_RS15645 NONE
CYD39_RS15640 NONE
        hybO NONE
        hybA NONE
        hybB NONE
        hybC NONE
CYD39_RS15615 NONE
        hybE NONE
        hypA NONE
        hybG 3190022 .. 3190047 -  -4.1  -3.28712   GGTTTCGCCCCATAA         TCGATATATAA ATAA TTATACAACGA          TTATAGAGCGATATA  50 59
CYD39_RS15595 NONE
CYD39_RS15590 3188112 .. 3188132 -  -3.9  -3.25652   CCCATTGAACGAACA            GCTTCACGA ACG CCATGACGC            CAGCGACTTCGAAAA  47 136
CYD39_RS15580 3185177 .. 3185213 - -13.8  -3.81488   CGCTGGTAAACACAA   CAGGCGGGATATCGGCA CACA CGCCGATATCCCGAC-G    AGAATGCCCCCGTTA 100 38
CYD39_RS15575 3183336 .. 3183369 - -16.9  -3.14344   GATGTTGCTGATTAA     TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT      AAACAAACCCAGCCA 100 154
CYD39_RS15555 3177228 .. 3177247 -   -15  -3.25539   TAAGGGTAATGAAGA            CGGCCACC CGAA GGTGGCCG             TTAGAACCCGGTAGC  95 76
CYD39_RS15550 NONE
CYD39_RS15545 3174877 .. 3174888 -    -3  -5.27779   GTGAACACTAAAAAA                TGAT TTAA ATCA                 AAAAACAAACTATTC  76 199
CYD39_RS15540 NONE
        iraD 3173442 .. 3173455 -  -5.2  -3.66178   GTGGGTAATGTTAAA               CGCC CGGCCC GGCG                TTCCTTCCTGCATTA  57 38
CYD39_RS15525 NONE
CYD39_RS15520 3169996 .. 3170006 -  -3.2  -4.09805   TGACGAACAATTAAA                 GGAT TCA ACCC                 TGTTTATGGCTTTCA  57 19
CYD39_RS15515 NONE
CYD39_RS15510 3167602 .. 3167618 -  -6.6  -3.09234   ATAAATCGCACGGAA              CTGGTT TCCCG AACCAG              AATGTCCTCGGTACA  54 164
CYD39_RS15415 3156044 .. 3156054 -  -4.6  -4.24948   GTATTACACTCAAAA                 CGGC ATT ACCG                 ACTGGCAGACCGTGT  66 209
        trmB NONE
CYD39_RS15385 3150921 .. 3150942 -  -9.3  -3.11024   TCCCTCAAGACAAAG           CGGGCCGGC ATTT GCCGACCCT            GTACTTATTAGTCCC  68 33
CYD39_RS15380 3150141 .. 3150161 - -15.5  -5.35365   AAAACAGAATAAAAA            GGCGCAGAT ACG ATCTGCGCC            ATTGTTTAAAAAGGA 100 45
        ansB 3148917 .. 3148938 - -15.1  -3.24232   GGTCTTCCAAAGATA           GCCCCGGCC TTCC GACCGGGGC            ATTATCTTTAATACT  95 33
CYD39_RS15370 3147719 .. 3147770 - -12.5   -3.9461   CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA 100 61
CYD39_RS15340 3143311 .. 3143327 -  -2.1  -3.08812   GTGGTTTTAACAAAG              CTGCGAT TTT AACGCCG              GTTCGCCAGGATACA  42 109
CYD39_RS15335 3142279 .. 3142317 -  -9.5  -3.53761   GAACGTTTGCTGAAA   GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC   AATATGGATGGCACT  71 300
CYD39_RS15290 3134565 .. 3134582 -  -6.3  -4.52703   GAAACCACGAGAAAA             CTCTTGC GTTA ACAAGAG              CGCCCTTGTTCAGTC  76 244
        yqgB NONE
        speA 3132343 .. 3132370 - -15.8  -4.94487   TTATAAAATATAAAA        GGGTCGATTTAA ATAA TTAAATCGACCC         ACAAGCGGAATACTC 100 45
CYD39_RS15275 3131443 .. 3131473 -  -4.7  -2.87344   TATGCGCGTCACACA      GTCCTTCCCCACCA GACT CGGCAGGAAAGG-C       GCTGATTCCCATAAC  48 66
CYD39_RS15270 3130043 .. 3130065 -  -2.7  -3.93288   GGGTATGCAATTAAA          GCGATGATCG ACCA CGATCTT-GC           CCCGGTACTGTCAGG  54 520
CYD39_RS15260 NONE
CYD39_RS15255 NONE
CYD39_RS15250 NONE
CYD39_RS15245 3125159 .. 3125191 - -11.3  -4.79756   TACAGAACGTAAAAA      GCCTTTCCGCGATTA GCC TCAACGCGAAAAGGC      TCTGAAGTCAGAAAA 100 116
CYD39_RS15240 3123962 .. 3123994 - -12.7  -5.80817   GTCAATATAAAAAAA      CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG      TTTGAATTTGTTTAC 100 164
        speB 3122683 .. 3122706 -  -4.6  -4.57073   GATCTTGGCGAAAAA          CT-GGTGAACT CGC AGTTCTCCCAG          CGTCAGGAGTCCGAA  71 327
         tkt 3119843 .. 3119862 -   -15  -5.45652   AGGGGGAATAAAAAA            CGGGTCGC CGAA GCGACCCG             TTTTATGCCGTATTA 100 45
CYD39_RS15195 NONE
CYD39_RS15190 3114155 .. 3114174 -   -15   -3.6053   TCGGCGATAAATCAA            CGGGCAGG AATC CCTGCCCG             TAACGATTACTTCTT 100 32
        fbaA 3112961 .. 3112980 - -12.2  -5.67967   ATGACGATAAAAAAA            TGGCTTCC CGAG GGAAGCCA             TTTCAATCAGCAGAC 100 45
        mscS 3111839 .. 3111861 -  -4.1  -3.73302   GAAGAGACTGAATAA          CGGAT-GGCG GCTA CGCTTATCCG           CTCAATAACCAGAGA  55 77
        argO 3111087 .. 3111103 -  -3.7  -3.54475   TTGTCCATCAGACAA              CGCTT AGTTGAA AAGCG              CGTGCATATGCGCGA  52 12
CYD39_RS15170 3110219 .. 3110244 - -12.5  -4.39828   AACACCGGGAGAAAA         CGCGGCCTGGA AGCG CCCAGGCCGGG          CGAGGTTACTGCGTG 100 31
        rpiA 3108310 .. 3108323 -  -2.4  -3.08135   GGCAAACAATTAAAC               GTGA TACATG TCAC                CAAATTTGCCCTGAC  42 78
        serA 3106844 .. 3106865 - -11.6  -3.16682   AACCAGAAGAAAGGA           TGGGCAGG TCATCT CCTGCCCA            TTTAGAGGAAATTAG  81 37
CYD39_RS15130 NONE
        pepP NONE
        ubiH 3102015 .. 3102032 -  -2.5  -3.14051   GTATTTTTACGAACA             CGATGCC GGAT GGCGGCG              TAAATGCCTTATCCG  45 55
        ubiI 3100663 .. 3100689 -  -5.8   -3.8901   TTTCAAACGAGGAAA        GCCC-CCCGGC GCGATA GCCGGGAAAGC         AAAGTGTGACGGGTT  63 71
        gcvT 3099189 .. 3099209 -  -8.9  -2.84946   AAAAAGGATGAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  67 2
        gcvH 3098709 .. 3098724 -  -5.4  -3.41359   GTGCGAAAACGAATA              CGCAAA ATAA TTCGCG               TTGCAGTGAGTAGGC  56 72
        gcvP 3095696 .. 3095709 -  -9.5  -4.24123   TTAACAAGCTGAAAA               GGCGC CGAA GCGCC                TTTAGAAAACAGTCG  84 51
CYD39_RS15095 NONE
CYD39_RS15090 3094063 .. 3094074 -  -4.4  -3.94823   GACAAAGTAGAAGAA                GATG GCGG CATC                 AACGACGACTACCGC  60 337
CYD39_RS15080 3092289 .. 3092299 -  -5.4  -3.86897   CTTACTCCGGAGAAA                 CGTT CAT AACG                 ATGAACTGCGCCTCT  63 158
CYD39_RS15075 3091510 .. 3091552 -  -9.9  -4.16279   GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGCTCTCGTAGGCCG  84 85
        sdhE NONE
CYD39_RS15060 3089522 .. 3089543 -  -2.2  -4.15044   CCTGGTGTGAACAAA           TTCTCGGC GAAATG GCCGAACA            CTACGCCTGAAGCCT  55 88
CYD39_RS15050 NONE
        dsbC NONE
        recJ 3085485 .. 3085510 -  -9.1  -3.30903   AAAATGCGGTTATAA         GGGCGAAAT ATTAGCGG ATTTCGCCC          CTTAATTACAGCGAA  71 62
        prfB NONE
        lysS 3082777 .. 3082807 - -17.7  -3.18366   GCCTGAACGAAGAGA      TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA       ATTTACATCTTATTT 100 35
CYD39_RS15020 NONE
CYD39_RS15015 3080696 .. 3080723 -  -4.1  -5.12617   GAACCACCTAAAAAA        CGGGGATTATA TCGGTG TCTACTCCCCG         CTTGACGGGCTGGAC  77 321
CYD39_RS15000 NONE
CYD39_RS14995 NONE
CYD39_RS14990 3077194 .. 3077210 -  -5.1   -5.4593   TTAAAACAATAAAAA              TAGATCG ATA CGATCGA              TGATTATGATCGTAA  87 515
CYD39_RS14985 3076337 .. 3076362 -  -4.7  -4.61868   CAGTCAGATATAAAA         GCCGTCC GATCCCCTCCGT GGACGGC          TTCTCCCTGTCGTTA  71 55
        stdB NONE
CYD39_RS14975 NONE
CYD39_RS14970 3071831 .. 3071862 -  -3.8  -3.77846   CAGAAGACATGCAAA      CTCTCCGTTTTTTT AGTG AAAAAGACCGAGAA       GAAAAAAATAATCAT  55 98
CYD39_RS14965 NONE
CYD39_RS14960 NONE
        rcnR 3069119 .. 3069142 - -12.5  -3.88396   GGCTAAAGTAAAAGA          TAGCCGGGA TATAAC TCCCGGCTA           TTTTATATAAGAATC 100 23
CYD39_RS14935 3066268 .. 3066281 -  -2.4  -5.41143   GATTGTTTAAAAAAA               GTGA GTTTTA TCAC                AAAGGAAATGACGCT  77 60
CYD39_RS14930 3064761 .. 3064797 - -14.5  -4.09739   CGAACGGCGCTAAAA    CTTACGCACTTGTCTGA TTT TCAGACATGTGCGCCAG    ATGCTGTATGCGGTT 100 243
        kduI NONE
        kduD 3062852 .. 3062869 -    -7  -5.69473   GAGATCATAAAAAAA             CCCTGT ACGAGG ACAGGG              CTTTATCAGTTTTTT 100 87
CYD39_RS14915 NONE
CYD39_RS14910 3059907 .. 3059917 -  -4.6  -3.71848   CCCCGGCAGGAACAA                 CCCG TAC CGAG                 TTACTAACGCTAAAT  55 447
        lysA 3057768 .. 3057803 -  -9.7  -2.86164   CCTGTAATGATGACA   CGGCGCTGGGCGCGGCA AAAG CGCTGCGC-CAG-GCCG    GATTACGCATCCCGC  65 274
CYD39_RS14885 NONE
        lplT 3051723 .. 3051733 -  -2.4  -4.62302   GAACAGGCGCAAAAA                 GCCG TTG CCGC                 CTACGTCGATATCGC  65 326
        rppH NONE
        ptsP NONE
CYD39_RS14845 NONE
CYD39_RS14840 NONE
        thyA 3043333 .. 3043352 -  -7.1  -5.81032   GAAGGGTAAAAAAAA            CCGACGC GCGATG ACGTCGG             TTATGGCAGGATCGT 100 47
CYD39_RS14830 3042708 .. 3042735 -    -4  -3.37796   CTCCAGTAGCGAGAA        CCCCCGCGTG GTTATTGA CACGTGGCGG         CCTCGTTACGCTCGC  50 9
CYD39_RS14825 NONE
CYD39_RS14820 NONE
CYD39_RS14815 NONE
        recC NONE
CYD39_RS14805 NONE
        recB NONE
        recD 3029531 .. 3029573 - -12.1   -3.4252   GCGGATTTAGGATAA CGAG-GGGGGCCTGAT-AGCG CTG CGCTTATCAGGCCTACGCTCG AAAGCATCATTTGGA  88 85
CYD39_RS14785 3026614 .. 3026627 -  -8.1  -3.41636   AACCAACTTAATGAA               CACCC TTAC GGGTG                TTTTTTTGTATCTGT  65 111
        mltA 3025027 .. 3025045 - -10.3  -5.88565   CTCAGAATAAAAAAA             GGTGAGG TTATT CCTCACC             CCTGCTCACTATTTT 100 96
        tcdA 3023746 .. 3023768 -  -2.9   -2.9348   GCGAAAGTTTATACA          TTAT-GATGT GATG ACATCGATAA           CGATTGAAACATTAT  42 457
CYD39_RS14745 3020852 .. 3020871 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CATATT GCGGTGC             TTTTTTTTGTATAAC  74 47
CYD39_RS14740 NONE
CYD39_RS14735 NONE
        rlmM 3018073 .. 3018117 - -16.6  -3.30771   TCATAGGCCGGATAA GCG-TGC-GCCATCCGGCGC CGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT 100 30
        fucA NONE
        fucO 3009680 .. 3009692 -  -4.9  -3.95073   CTTGAGACGCATAAA                GAAAT GGC ATTTC                TTTGCCGCGATATTG  60 194
CYD39_RS14665 3002481 .. 3002492 -    -3  -2.95093   ATACCTTAAGTAAAT                TTTC ATAT GAAA                 GTGCGCAAAAACATT  42 157
CYD39_RS14660 3002062 .. 3002087 - -17.7  -6.22691   GAATAACAAAAAAAA         GGGAGCACTGT ATAA ACAGTGCTCCC          GGTTCGTTTCGCAGC 100 106
CYD39_RS14655 NONE
        truC NONE
CYD39_RS14645 3000406 .. 3000425 - -10.7  -2.82666   GCAAACGAAAAGGTA            CCCTCCC GTAGGG GGGAGGG             ATTTACCTCAGGAAA  74 33
CYD39_RS14640 2998603 .. 2998614 -  -4.4  -2.64099   CGTTGTCATGATAAT                TGTC CTGC GACA                 GGTTTCAGTTCAATA  46 4
CYD39_RS14635 NONE
        gudD 2995865 .. 2995890 - -15.5  -3.54436   CATACACCCAGAGAA         GAACCGGTTCC TTAC GGAACCGGCTC          TGACTTAACGCACCA 100 30
CYD39_RS14625 2994230 .. 2994266 -  -7.2  -3.85698   TTGCTGCGCTATAAA   CCTGGCGCCAAC-GTAGC AGC GCGCCTGCTGGCGCC-GG   AACCGGCTGAGTTTA  68 434
        rlmD 2990489 .. 2990515 - -10.9  -2.52464   CCTCTCCTTAAGGGA        CCAGGCCTACCG AAGT CGGTAAGCC-GG         TAATCATTACATGCG  74 32
        relA 2988149 .. 2988178 -    -3   -4.1196   AATGTACGTCGAAAA       CATACCCCATA TCTCATGCT TATGGGGT-TG       GCTAATGCGGCTTTG  56 83
CYD39_RS14605 NONE
CYD39_RS14600 2987628 .. 2987659 - -11.1   -2.7044   CATGGAACCATACCA      GATATCTGGTAAGC AGATA GCT-ACCAGATATC      TTTATAAAACATCAA  74 37
        mazG 2978225 .. 2978235 -  -4.6  -2.88788   GGAGGGAGAAAATAG                 CCCC TTT GAGG                 TAAATGTTTTTGACG  48 100
        pyrG 2976407 .. 2976430 - -13.9  -4.08164   AAAACTTCAGACAAA          CGGTGCACC GCTGAG GGTGCACCG           CCGTTCTAACTTTTT 100 40
CYD39_RS14545 2975023 .. 2975036 -  -9.5  -5.77988   ACAGATACAAAAAAA               CCCGC CGAA GCGGG                TTTATACGTTAAGAG 100 53
        queE 2973899 .. 2973933 -  -9.3  -3.01712   CTGGCGCGGGGAACA    CGGCGACTAACGGCGT GCTG AC-CAGCCAGTCGCCG     GTTTATCCCCGCTGG  68 349
CYD39_RS14535 2972173 .. 2972188 -  -5.4  -3.36492   GCCTGAAGGGCATAA              GTGC-GG CCG CCTGCAC              GGACACTCGTTTATG  53 386
        cysJ NONE
        cysI 2968123 .. 2968134 -  -5.8  -3.30124   CGGTAGGCCGGATAA                GGCA TTTA TGCC                 GCCATCCGGCAATTC  56 44
        cysH 2967259 .. 2967275 -  -9.4  -4.32804   ATAACCAATTTAAAA              TCCGGC TGCCT GCCGGA              TTTTTCATAGCAGCA  86 67
CYD39_RS14500 NONE
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e NONE
       cas1e NONE
CYD39_RS14465 2956882 .. 2956920 -  -2.3  -4.92757   CCATTAACAAGAAAA  TGACCGGTTTATCCCCGC TGGC GCGGGGA-ACACAGCTCC   GGCAGGGTCATGTCC  69 360
        cysD NONE
        cysN NONE
        cysC 2951746 .. 2951763 -  -9.8  -2.79831   GTAACCTTGACCATA             CCGGGC ATACAA GCCCGG              TGGTGTCTCAGGATC  69 33
CYD39_RS14440 2951286 .. 2951312 - -13.8  -2.57344   GATTGCCGCGACAAC         GCCGGCAAATGT ACC ACATTTGCCGGA         TGTTACGTATACCCG  86 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
CYD39_RS14410 2947165 .. 2947188 -  -6.8  -3.21912   CGTGCAACGCATTAA          GTGAACAC GGGAAAAT GTGTTCAC           GATACGCTTAACCCA  59 116
        nlpD 2945910 .. 2945922 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  48 73
        rpoS 2944865 .. 2944908 - -14.8  -4.27117   CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG 100 32
CYD39_RS14380 2942014 .. 2942027 -  -9.5  -4.18668   CCAAAAAATAGCAAA               GCGGC GCAA GCCGC                TTACGTCATCATCTT  84 26
CYD39_RS14370 2940134 .. 2940147 -  -2.3  -2.74999   CAATTTTTAACATGA               CGGCT CCTC AGGCG                TGACGCCAGGCAGAG  40 3
CYD39_RS14365 NONE
CYD39_RS14360 NONE
CYD39_RS14355 NONE
CYD39_RS14350 NONE
CYD39_RS14345 2934665 .. 2934685 -  -3.9  -4.04174   CTGGAGATAAGCAAA            GCCGGCAAA ATT TCTGTCGAC            AGCGCGCGCTCGCTG  58 310
CYD39_RS14335 NONE
CYD39_RS14330 2932269 .. 2932308 - -21.6   -3.5394   AAAGTCTGGTGTAAA  CGTGTCAGACCCGATAGCG CCG CGCTATCGGGTCTG-CGCG  CCGGAACAGGCTTTT 100 40
CYD39_RS14320 2928695 .. 2928715 - -10.5  -3.25823   GCTCCCGGAGATTAA            TGAGAGACA TCC TGCCTCTCA            CCGAAGACCAACCAC  74 441
CYD39_RS14310 NONE
CYD39_RS14305 2927204 .. 2927216 -  -4.9  -3.77303   TATTCAAACATAGAA                TTCTA TCA TAGAA                TATTAACCCTCCCTG  59 176
CYD39_RS14280 2923786 .. 2923801 -  -6.2  -3.64487   GTACACCTTTAACAA              TCAGAA TGTT TTCTGA               GTCAGCGAAAGCTGG  60 332
        invF NONE
        invG NONE
        invE NONE
        invA NONE
        spaK 2915751 .. 2915766 -  -3.2  -2.85078   GATATTGCAGTAAAC              GAGGTG TTTT CATCTC               ATTAGCGACCGACTA  44 19
CYD39_RS14235 NONE
        spaM NONE
        spaN 2913032 .. 2913046 -  -2.1  -3.12351   CTGTCTCACACGCAA               TGACA TCAGG CGTCA               TCCTCCTCGCCAGAT  42 16
        spaO NONE
        spaP NONE
        spaQ 2911162 .. 2911181 -  -3.6  -2.76037   ATTTCAAAGTACAAC            GCGTAAAA CATT TTTTACCC             CTTAGCCAACGCCAG  43 20
        spaR NONE
        spaS 2909258 .. 2909268 -  -2.4    -3.767   GATGCAGTTATTAAA                 CCCC GAC GGTG                 GTTAGTGAACATTCA  51 81
        sicA NONE
        sipB NONE
        sipC 2905582 .. 2905638 - -13.7  -3.34806   ATATTAAGCATAATA TCCCCAGTTCGCCATCAGGAGCGCGAT TAA ATCACACCCCTGATGGCGTATAGATGA CCTTTCAGATTAAGC 100 35
        sipD NONE
        sipA 2902475 .. 2902489 -  -2.1  -2.60075   TCCCGGTTAATTAAC              GC-TGC ATGT GCAAGC               CATCAACGGTAGTAA  39 6
CYD39_RS14170 NONE
CYD39_RS14165 2901895 .. 2901906 -    -3  -2.90075   TCCTCTTGAATTATA                TCTT TTAT AAGA                 TTGCTTCTTCAAATT  42 18
        sicP NONE
        sptP 2899820 .. 2899853 - -14.9  -4.18019   ATAATTATACAGAAA     TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA      TATTTTTATCAGCTT 100 34
        prgH NONE
CYD39_RS14130 NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
CYD39_RS14105 2891114 .. 2891127 -  -2.3  -3.17982   ACAAATCGCCAGCAA               TGGGG GGTT CACCA                GTCAATTGCCTCTTT  44 20
        sirC 2889890 .. 2889902 -  -6.3  -2.96307   AATAATTTCACAAAT                CAATG GTT CATTG                TACGCATAAAGCTAA  55 12
CYD39_RS14095 2888628 .. 2888646 -    -6  -3.90048   TTGCCTGCAAAAATA             TGCCTCAA TGA TTGAGCCA             GGCTACCAACCACCT  66 128
        avrA 2887238 .. 2887249 -  -2.2  -2.77043   CGCACCAGGCGAAAG                CCAG CGGG CTGA                 ATACCACGCTACTGC  39 456
CYD39_RS14065 2883476 .. 2883486 -  -2.4  -4.25104   GTGGCTGGACCAAAA                 GGCG CGG CGCA                 GCGTCTGGGGCTTAA  60 163
        hycA 2876852 .. 2876882 - -12.6  -3.65542   CCCATCCCCAAAACA       TTCATGACGTGGCG CAA CGCCACATCGCGAA       TCAAAGCGGGCAACG  95 49
CYD39_RS14025 NONE
        hycC NONE
CYD39_RS14015 2873403 .. 2873421 -  -3.7  -2.90992   AACTCTCTTAAATCA             CGCCGCC AGCAA GGAGACG             AAGGCTAAAAACGCA  46 4
CYD39_RS14010 NONE
        hycF NONE
        hycG NONE
        hycH NONE
        hycI NONE
CYD39_RS13985 2868572 .. 2868584 -  -7.7  -3.31144   GTGTCATCGTCACAA                GTGTC GAT GACAC                GTAATGTCGCCAGTG  65 91
        hydN 2867845 .. 2867856 -  -5.8  -3.34962   CCGTAGACCGGATAA                GGCA TTGA TGCC                 GCCATCCGGCAATGC  56 73
        hypF 2865496 .. 2865507 -  -7.2  -3.51365   TTACAGGCCAGATAA                GGCG CAGC CGCC                 ATCCGGTGCCCTACA  65 36
        norR 2861092 .. 2861105 -  -2.3  -4.25283   AGTGGTCGATGAAAA               CGGCA AACT CACCG                GCGCCATTAACCTAC  60 66
        mltB 2854721 .. 2854746 -  -9.8  -3.89505   AAAAAGCCATAATAA         TAGCGGAGGGG GGGCT CCCCTCC-CTA         AGCGTAAATTAGCGC  81 34
        pncC 2853759 .. 2853778 -    -8  -2.84098   CTGTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
        recA 2852547 .. 2852566 - -11.4  -4.26189   GGAGAAATGCCAAAA            GGGCCGCA TAAA TGCAGCCC             TTGATGGTAATTTAA  93 92
        recX NONE
CYD39_RS13895 NONE
        alaS 2849111 .. 2849132 - -17.3   -3.6502   TAGCGTTGACGTAAA           CGCCGCAGC ACGG GCTGCGGCG            CCAACGAACGCTTAT 100 43
        csrA 2848690 .. 2848704 -  -4.2  -3.36878   GCGAGCGAGCGAGAA               GAGAGG CTG CGTCTC               ACCCGAAAAGTGAGA  50 51
CYD39_RS13880 NONE
CYD39_RS13875 2848252 .. 2848262 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
CYD39_RS13870 2848114 .. 2848124 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
CYD39_RS13865 2847853 .. 2847863 -  -5.4  -4.04806   TGCCACACTAAATAA                 GATG GTG CATC                 CGGGAGGATTACTCG  65 139
CYD39_RS13860 NONE
        yqaB NONE
CYD39_RS13850 2846459 .. 2846476 -  -3.5  -2.76171   TTTAATAAGCATAAC             TGTAATGG CGG CCAT-ACA             TGCCAAACCTACAAT  43 43
        gshA 2844744 .. 2844760 -  -2.2  -4.85782   TTTTTTAAAAATAAA              CTGAAC TCTTT GTTCCG              GGGCGAGTCTGAGTA  66 126
        luxS 2844143 .. 2844161 - -10.2   -5.5604   TTAAGCAATAAAAAA             CCCCGGCC ATA AACCGGGG             TTAATTTAAATACTG 100 60
CYD39_RS13835 2842445 .. 2842460 -    -9  -4.41206   AACTATCTGATAAAA              GGGATC TGCG GATCCC               TTTTTTAGTAGACCA  85 45
CYD39_RS13765 2827521 .. 2827532 -  -7.2  -3.16564   GGTGTAGCGTAGGAA                CCGC CGCA GCGG                 TAGGGATTTTTATCG  59 150
CYD39_RS13755 2826705 .. 2826734 -  -8.5  -2.53911   CTAAGGCGTAAGTTA       GCGTCGCGACTGGC ATT GCCAGTCGCG-CTT       TTAGTCGGTTTTTTC  63 26
        stpA 2824799 .. 2824809 -    -4  -4.57073   GAGCCGGGCGAAAAA                 TTGA TCC TCAA                 AGCGGCAGATGTCAC  69 167
CYD39_RS13720 2823395 .. 2823412 - -14.1  -3.31263   AGGTTATCCTGATAA             GCGGCGC TTAT GCGCCGC              CGGTGGCCGGTAATT 100 39
        lysM 2822795 .. 2822814 - -13.6  -2.62192   CGCCAGCGAATTAAT            GCGTCAGC ATTT GCTGACGC             CGATTCCCATTATTC  78 88
        tctD NONE
CYD39_RS13655 2810024 .. 2810045 -  -2.9   -4.2717   ATCATTTGATTAAAA           CGTCACACC TCAA GATGCGACT            TTTTGTAAACGTGCT  58 65
CYD39_RS13650 2808887 .. 2808917 -  -9.1  -2.59876   TCAGGAGATAAAATG       CTTCGGCAATGAT GTGAT ACCACTGCCGAAA       TGCTATTTTTACAGA  66 47
CYD39_RS13630 2804459 .. 2804486 -    -7  -2.71369   ACTGTAAATAATTTA        CTCTCAGCTACT ATTC AGTAGCAGATAG         TTATTCTTACATTGC  55 69
CYD39_RS13625 2803974 .. 2804010 - -17.5  -4.07687   ATGTTGGCGCCAAAA    TACAAAGCGCCTGGTAA TAA TTATCAGGCGCTTTGCA    GACAGAAAACCATCA 100 38
CYD39_RS13615 2801301 .. 2801323 - -17.8  -3.29043   AACCCGCCGCCAGAA           TATGCCCGCC AGC GGCGGGCATA           ATCCATCAAAACGAG 100 31
CYD39_RS13550 NONE
CYD39_RS13545 2786067 .. 2786098 -  -6.8  -2.52464   TCCTGCTGCAAGCTA      TTTTTTCTGTTCTT TCCG AAGAACAAAAAAAT       CAAATTATTAAAATC  51 241
CYD39_RS13535 NONE
CYD39_RS13530 2785332 .. 2785342 -  -2.4  -3.09908   TTTGGGCAAAAGAAT                 GCCC GGC GGGT                 TTACGCCATTAATTT  42 51
CYD39_RS13525 NONE
CYD39_RS13520 NONE
CYD39_RS13515 NONE
CYD39_RS13510 2781239 .. 2781254 -    -4  -4.32402   CTCCAATCAAAACAA              CTGTAT ATAA ACACAG               TATATAATTACCCAT  64 373
CYD39_RS13500 2780870 .. 2780889 - -11.4  -4.53636   ATGACATAAGTAAAA            GCCCGCCA GTTC TGGCAGGC             CTTAGCAAAAACGAT 100 165
CYD39_RS13495 NONE
CYD39_RS13490 2778576 .. 2778593 -  -8.4  -4.43477   TTTAGTTAATGAAAA             GGCCGA ATTCTA TCGGCC              TAGATATTTAAAAAA  84 48
CYD39_RS13475 NONE
CYD39_RS13470 NONE
CYD39_RS13465 NONE
CYD39_RS13460 NONE
CYD39_RS13455 2772297 .. 2772311 -  -2.8  -2.59927   AAGCGTCATAATTCA               GTCC CATAGCT GGAC               GGTCTGCGCCGTGGT  40 8
CYD39_RS13450 NONE
CYD39_RS13445 NONE
CYD39_RS13440 NONE
CYD39_RS13435 2770732 .. 2770747 -  -8.2  -2.78596   CACTTTGTCAGCACA              GACCGC CCAG GCGGCC               TCGGTTTCATCCAGC  60 59
CYD39_RS13430 NONE
CYD39_RS13425 2769774 .. 2769828 -  -4.1  -4.24948   CCATCAGAGGGAAAA GGGAGGCAGCGCGGGCGCTTGTGCCA GCAG TGGCACAAA-GATCACCCCGCCAGCC AGCGCAGCAGAGTGT  62 12
CYD39_RS13420 NONE
CYD39_RS13415 2768811 .. 2768829 -  -3.8  -2.76261   CGGTAACCGGGAAAG             GTCAATGA CTG CCATTGTC             TGCTCCTGTAGTTAC  45 8
CYD39_RS13410 NONE
CYD39_RS13405 NONE
CYD39_RS13400 NONE
CYD39_RS13395 2765054 .. 2765080 -  -6.6  -2.62735   AGACGTTTCAGATGA         GGCCACCT TCACCGCAATC AGGTGGCC         TGCATTACCACAATA  55 45
         fin NONE
CYD39_RS13375 NONE
CYD39_RS13370 2761304 .. 2761329 -  -8.9  -3.90291   ATCCTGTTAATGAAA         TACTGGCGCGG CTGC CCGCGCCGTTA          AGGTTAATCAGAGGC  79 33
CYD39_RS13365 2760947 .. 2760967 -  -7.5  -3.42395   GCGACCAGTGAAAGA            TGGTGGCGA TAT CCGCCACAA            GATCATCAATCGTCA  65 38
CYD39_RS13360 NONE
CYD39_RS13355 NONE
CYD39_RS13350 NONE
CYD39_RS13345 2756436 .. 2756448 -  -2.7  -3.68222   CCGTAATCGCAATAA                TGATA CAT CATCA                CTCAATATTGAGAAC  50 44
CYD39_RS13340 2756157 .. 2756173 -  -7.2   -5.4505   GGCGGCAACAAAAAA              CCCGCC ATTAA AGCGGG              TTCTGTTCAGAAACT  95 32
CYD39_RS13305 2737607 .. 2737626 -  -5.8  -3.51825   CCACTTCAACCACAA            GTTTATCCG GCA CGG-TAAAC            CTCTTTGGCGCGAAC  57 8
CYD39_RS13300 2737147 .. 2737157 -  -2.4   -3.1997   ATATTGATAACAAAC                 CGGC GTT GACG                 AAGTAATTTTGTGAT  44 197
        grpE 2733308 .. 2733328 -    -9  -5.53288   TTTAAGCTAAAAAAA            TGGCCGAC TTTAC ATCGGCCA            TCAGACTTTTACTTC 100 34
CYD39_RS13260 2728726 .. 2728753 - -13.4  -4.43307   GTGTGAATAAAACAA        CCGGGCCCCATC GAGG AACGGAGCCCGG         CGTCATATTAAAAGC 100 224
        rpsP NONE
        rimM 2727892 .. 2727902 -  -2.4  -3.33744   CGGTGGTTTAAAAAC                 CAGG ATC CCAG                 TCTACTTCGATAGTA  45 7
        trmD NONE
        rplS 2726621 .. 2726643 - -10.5  -5.33866   CAAACCCATAAAAAA           GGGGCCAGC GTAAT GCCAGCCCC           TTCTTTTCTACAAGC 100 66
        aroF 2723274 .. 2723290 -  -2.3  -2.52933   GGTCAATTCAGCAAC              CATAACA ACC TCTTATG              CGACGCGCACCGCCA  39 21
        tyrA 2722120 .. 2722134 - -11.4  -5.37593   CCTTAAATGAAAAAA               GCCAGC AAA GCTGGC               TTTTAGTATAGATGT 100 46
CYD39_RS13215 2720788 .. 2720814 -  -5.7  -4.67353   GCAGCGATGGAAAAA        GTCGCGCAGGCG AACT CTCC-GCGCGTC         GCGGCGCTCGGCAGC  75 400
        rluD NONE
        pgeF 2716543 .. 2716557 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTGAA  61 98
        clpB 2713890 .. 2713907 - -10.5  -5.27335   GTTTTTAAACAAAAA             CGAGCCC GTCA GGGCCCG              TTTTATTCAAATTTG 100 45
CYD39_RS13175 2711898 .. 2711911 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
CYD39_RS13170 2711700 .. 2711735 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGCA AGTCAGTTTTGAGATA     CTGATGGCAACGCCT  79 61
CYD39_RS13165 2708515 .. 2708527 -  -3.3  -3.05816   TTATTGCGTACTCAA                CTCTG AAT CAGTG                CTGAAAATCGTCTCT  45 56
         rrf 2708215 .. 2708246 - -18.2  -4.63586   AGACTACAGATAAAA      CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG       CTTAATTTGATGCCT 100 37
CYD39_RS13155 NONE
CYD39_RS13150 2705845 .. 2705871 -  -6.6  -3.19463   GTCACCAGGGAGTAA        GCCCTGACCGC AGCGCA GCGAT-AGGGC         TGATGTTTTCTTTGA  56 165
CYD39_RS13120 2699015 .. 2699044 - -13.5  -2.76361   TAGGAAGTACATAAT       CGGCCCGGCG-CGC GTT GCGTCACCGGGCTG       CAGCCCTTACGCTTT  86 32
        grcA 2697499 .. 2697523 - -16.5   -5.3689   ACAAATAAAACAAAA          GCGGAAAAGGC CCG GCCTCTTCCGC          TTGTTATTACCGGAT 100 46
CYD39_RS13100 2695882 .. 2695903 - -14.5  -3.44206   GAAGAGTGATGATAA           TGCCGGGTT CGTT AACCCGGCA            TTTTTTTATCTTCCA 100 15
CYD39_RS13090 2693592 .. 2693604 -  -3.3  -3.36991   GATGATGCGTAAAGA                GAGCC GGG GGCTG                CACTTTACGCTGGAT  47 94
CYD39_RS13080 NONE
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 2688879 .. 2688889 -  -4.6  -3.63744   TTTTCCTGTAAAACA                 CCGC AAC GCAG                 GAAAAGCGCATGTTT  55 88
        lepA 2686874 .. 2686886 -  -3.4  -3.64609   CAGAATCAGGGCAAA                CATG TTCGC CATG                CCAACTCCTTAGGGA  51 41
        lepB 2685861 .. 2685893 - -17.2    -4.015   TTATCCAGGAAATAA     TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA      CGATCATTTCGTCAC 100 43
CYD39_RS13040 NONE
         era NONE
        recO NONE
        pdxJ NONE
CYD39_RS13020 2681738 .. 2681763 -  -3.3  -4.39329   ACTGTAGATAACAAA         TCAGCGCCAG AAAAGAG CTGGC-CCGA         GCAGAAAATAGGCGT  62 454
CYD39_RS13005 NONE
CYD39_RS13000 2678570 .. 2678598 - -11.8   -4.0896   AAACTGGTTTGAAAA        TGACTCTTCCGC CTCAT GCAGAAGAGCCA        TCAAGTTTATTGCGC  93 32
        murQ NONE
CYD39_RS12985 NONE
        yfhb 2674682 .. 2674694 -  -3.3  -3.02471   GCGGCATTATACACA                GACGC TAT GCGTT                TCACTATTCGAGCTG  45 29
        tadA 2673790 .. 2673800 -  -3.2  -4.74103   CTGTTAAGCCAAAAA                 CCGT ATT ACAG                 TAAGCTAACCTACGG  70 347
        purL 2668346 .. 2668364 - -11.7  -5.24129   GCCGTCTACAAAAAA             GCCCCTC GTGAA GAGGGGC             TTAATGGCTATCGGG 100 45
        qseE NONE
        qseG NONE
        glrR NONE
        glnB 2663278 .. 2663289 -  -5.8  -3.36991   GAGCAGCCCGAAAGA                GAGC GCCC GCTC                 GGTGCTGCGCGTCTG  56 525
CYD39_RS12910 2653717 .. 2653744 - -15.6  -3.61267   AAGTTCAAACGACAA        CGCCGCCGGA TAATGACT TCCGGCGGCG         TCACGTTATGGCGCA 100 95
CYD39_RS12905 2652344 .. 2652356 -  -4.7  -4.57073   CAGGCGTTTCAAAAA                GAGGG ATG CCCGC                GCGGCGTAGCGCTGA  71 148
CYD39_RS12895 NONE
CYD39_RS12890 2649189 .. 2649201 -  -9.1  -4.77438   ACGCACCAGTAAAAA                GACGC CGC GCGTC                GGCAAGCTCTTCCTC  93 290
        trmJ 2643665 .. 2643678 -  -3.9  -2.71681   TAATTTGGTCAACTA               TTTAC TTGA GTAAA                TTAGTCAGGTATTTA  45 65
        iscR 2642895 .. 2642918 -  -2.4  -2.72144   TCATTGCTCTTAAAC          TCCGTACATC ACTC AATGCAAGGA           ATCAGGCAACCGGCT  40 171
CYD39_RS12850 NONE
        iscU NONE
        iscA 2640739 .. 2640765 -  -8.7  -4.30719   GCCTGTCAGAACAAA        CCCCACACGCAG GCGA CCACG-GTGGGG         TTATACCTTCTTACT  84 163
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 2637556 .. 2637577 - -15.1  -3.78775   TTCCTTATTAGCAAA           CGGGCCGCC GTAG GGCAGCCCG            TTAGATCTTTTGCTA 100 228
        pepB 2636209 .. 2636234 - -11.1  -3.12395   GCCATCAGGCAAAAT         GCCGGGT-GGCG CTT CGCTTACCCGGC         CTACAAAAACACCGT  76 41
        sseB 2634896 .. 2634911 - -10.4    -5.626   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 478
CYD39_RS12795 NONE
        pbpC 2625516 .. 2625532 -  -3.1  -4.59853   GTAATTCCGGAAAAA              TTAATAA TTC TCATTAA              CTTTAAATTAAATGA  66 67
CYD39_RS12785 NONE
        dmsB NONE
CYD39_RS12775 NONE
CYD39_RS12770 2620714 .. 2620724 -  -2.6  -3.09878   TGGATGCAGGTAACA                 TTTT TTT AAAA                 TAAAATGAGCATTAG  43 50
CYD39_RS12765 2620048 .. 2620080 -  -4.1  -5.04249   GGTTGAAAAAAGAAA     CGCCCC-GG-TAAGC TTACT GCTCGTCCAGGGGCG     CTGCATTGTACAAAT  76 142
   trmG/rlmN 2618641 .. 2618651 -  -6.8  -3.50045   AGTCAGACAGTATAA                 GCCT GTC AGGC                 CGCAGATGACAAAAC  62 198
        rodZ NONE
        ispG 2616354 .. 2616374 - -13.3  -3.00298   GGGTTCAATCATACA            CGGGAAGCG CGC CGCTTCCCA            TCACGTTCTTATTTT  86 34
        hisS NONE
CYD39_RS12740 NONE
        bamB 2613128 .. 2613148 - -11.1  -4.60746   TTAAAAACAGGAAAA            CGGCCCCTA CAC CAGGAGCCG            TTTTTTAAAACGCAC  95 52
         der 2611537 .. 2611564 - -10.6  -3.60296   TACTTTTACTTGAAA        GGCCTGA-TAGCG CAG CGCTTGTCAGGCC        TGGAATATTACTGAA  83 47
CYD39_RS12725 2611233 .. 2611265 -  -7.7  -3.31144   CCCTTAGCCGGATAA     GACGTCGGCGCCTC TGCTCT GCGGCGC-AACGTC      GACAGCGGTTTTATT  65 36
        sinH 2608716 .. 2608746 -  -6.9  -3.04398   CCTTTTTCTCAAAAT      TCAGCGGC-TGGCT GGTC AGCCATAACGCTGA       CGCTATTTCTGGCTA  58 28
CYD39_RS12715 2607683 .. 2607706 - -15.4   -4.0896   AAAGTGCGCGGAAAA          TACCACTCCC CGCA GGGAGTGGTA           TGTTGAGGACAACTT 100 39
CYD39_RS12710 2601977 .. 2601991 -  -2.7  -3.77087   CACCCAACATTCAAA               GGCGC TCCCG GCCCC               ATTCACTACGGCACC  52 31
CYD39_RS12705 2601586 .. 2601599 -  -8.1   -4.0641   GTTGATTTAGATAAA               CAGGG ATAG CCCTG                CGTCGGCCAGCCTAA  74 37
        shdA 2594754 .. 2594776 - -14.1  -4.08216   TCATTCGCCTCAAAA           CCGGGCAGG GAATA CCCGCCCGG           TTTTGTCTAACTTAC 100 37
        guaB 2591620 .. 2591643 - -13.9  -4.56113   AACAGATTAAATAAA          TCGCCCGAC GCGAAG GTCGGGCGA           AGAAAATCAGGAGCC 100 32
        guaA 2589936 .. 2589953 - -10.5  -5.98675   CACAAAAACAAAAAA             GCCCGCA GTTA CGCGGGC              TTAGAGGTACTTTAC 100 75
CYD39_RS12680 NONE
CYD39_RS12675 2586642 .. 2586661 -   -10  -5.42975   GCACATAAATAAAAA            CCCTCTGC AAAA ACAGAGGG             TTAAATTCACTTTTA 100 326
CYD39_RS12650 2584651 .. 2584662 -  -4.4  -2.90797   GCGATATACATCACA                CGAT AGTC ATCG                 ATTGTAATTATTAAA  48 20
CYD39_RS12645 2582237 .. 2582247 -  -3.2  -4.41633   GATCTGGAAAAAGAA                 CAGC AGT ACTG                 GGAAGCGGTAACTGG  64 125
CYD39_RS12615 2575758 .. 2575776 -   -11  -5.81412   TTTATTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TTTTAATTATTTATT 100 44
        uraA 2574390 .. 2574410 - -18.3  -3.58726   TCCCTTGAGATAGAA            CCGGGCAGC ATC GCTGCCCGG            CAACCCGTTACTGAT 100 33
         hda 2573444 .. 2573478 -  -5.7  -4.39828   AAGATCTCTATAAAA    CGCTTCACCTGGC-GG ATAG CCAGCTAAGTGAAGAG     GCGTTAATCCAGGCG  73 169
CYD39_RS12590 2570330 .. 2570349 -  -9.3  -5.18726   TTCCGACAATAAAAA            TGCCGCA ACACGG TGCGGCA             TTAAAAAAAAGAGCG 100 134
CYD39_RS12585 2568930 .. 2568958 -  -9.6  -2.89881   TATCGACGTCATATA       CTGCGC-CTCCTT TAAC ATGGAGCGCGCAG        TATGGAAAAACCCGC  70 61
CYD39_RS12580 NONE
CYD39_RS12575 2566470 .. 2566498 -  -8.8  -3.10843   GAAAACGCGTAAAAG       CCTCAGGCCGCGC TGAT GTGCGGCCTG-GA        AAGGGAATGCGCCGT  66 40
        dapA NONE
        bamC 2563322 .. 2563341 - -11.4  -5.31275   TCTTATCAGAAAAAA            GGGCCGGA TTAC TCCAGCCC             TGTTAAATTACTTGT 100 33
        purC 2562427 .. 2562448 - -11.5  -2.90054   GAGGAAAGGATGATA           CCGGAGAGC GGTT GCCCCCCGG            TCAGAAGCGGAATTA  78 38
CYD39_RS12545 2561447 .. 2561458 -  -2.2  -2.64735   AGCGCATCGATATCA                GACA TCCC TGCC                 CCGGTTTATCAAAAG  39 34
        tmcA 2559415 .. 2559444 -  -8.6   -3.3858   AAAGTAACTGGATAA       CATGCCGGACAG GTATCG CTATCCGGTATG        GTTCCCACCGCCGGG  69 14
        ypfM 2557158 .. 2557178 -  -8.3  -5.24129   GTCGGGCACAAAAAA            GGCGACT TTCGTTG AGTCGCC            TTTTCTTATCCCCTA  95 51
CYD39_RS12505 2549820 .. 2549832 -  -9.1   -3.5393   ATCAGGCCGGTTAAA                CGTCG ACC CGACG                GGAAAATGTTTATCG  73 165
        nudK 2547427 .. 2547438 -    -3  -3.53012   TCTTTTTTGTGTAAA                GAAA TATA TTTC                 TTTTTTTTCAGTCCA  48 33
CYD39_RS12490 2546282 .. 2546297 -  -5.4  -3.11955   ACAACCAGGATTCAA              CGC-GTG ATC CACAGCG              TAGGCCAGGCATCCG  52 6
CYD39_RS12485 2545879 .. 2545919 -   -12  -3.12449   CGTTAGCAACACAGA  CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA  TTACTTCGTAGACTC  81 26
CYD39_RS12470 2540296 .. 2540313 - -12.7  -5.60993   CGGCGCATAAAAAAA             GCGCAGG AGAA CCTGCGC              CAGAAGAGAGAGTAA 100 48
        eutS 2539584 .. 2539598 -  -2.9  -3.15861   CATTACCGCCACCAA               TTAAC TTTTT GTTAA               CTCACACAGGGTAAA  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 2536593 .. 2536610 -  -2.6  -2.83403   TTCCTCTCATTAAAG             GGGTCC AGAACG GGACCG              TTCATTCAACCAGTG  41 27
        eutM NONE
        eutN NONE
CYD39_RS12430 2534474 .. 2534484 -  -6.8  -3.48924   TCATCCCTTATACAA                 TGCG AAA CGCA                 TCCACCAGCACGCAT  62 7
        eutJ NONE
        eutG 2532361 .. 2532372 -  -5.8  -3.30124   TTGTAGGCCGGATAA                GACG TTTA CGTC                 GCCTCCGGCATTAAC  56 92
        eutH NONE
        eutA 2529685 .. 2529702 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  44 16
CYD39_RS12405 NONE
CYD39_RS12400 NONE
        eutL NONE
        eutK NONE
        eutR NONE
CYD39_RS12360 NONE
CYD39_RS12355 NONE
CYD39_RS12350 2519618 .. 2519635 - -11.3  -3.68359   TCCTGAAAATGAGAA             TGCCACG CAGT CGTGGCA              TTAATGGAGGCTATT  87 81
        yfeX 2518577 .. 2518594 - -12.7  -5.48825   TATTAGGTAAAAAAA             TCCCCGC GGAG GCGGGGA              TGGGCATTTTTATGC 100 128
        ucpA 2517630 .. 2517657 - -14.2  -3.84992   AAGGGAATAAGAGAA        TC-CCTCCCCACG CGG CGCGGGGAGGAGA        CCGGCATCAATCAGA 100 36
CYD39_RS12335 NONE
        cysT NONE
        cysW NONE
        cysA 2513651 .. 2513676 - -13.3  -5.02074   TCAGCTCGTAAAAAA         GCCCGGTATGCG TAG CGC-CACCGGGC         GATAACTATACAAAT 100 48
        cysM 2512725 .. 2512744 -    -2  -3.60098   ACCTGTTAGCTTAAA            TCCCTGCC CCCT GGCTGAAA             TGCTCTTCACCAAAC  49 1
        pdxK NONE
CYD39_RS12285 2508256 .. 2508273 - -12.7  -3.67597   TGCCGCAGTGAAGAA             TGGCGCC TTTG GGCGCCA              TTTTTTTTGCCTGTA  95 138
        zipA 2502107 .. 2502123 - -10.8  -5.38249   ATCAATGATAAAAAA              CCCCCG ACAGG CGGGGG              TTACGTTAAAAATGT 100 57
        ligA NONE
CYD39_RS12245 2499816 .. 2499840 -  -7.1  -2.61106   CAGACCGAGAAGTTA         CAGGCGCAGC AGGAAA GCCGCGCC-G          CGAAAGCTTAAAGCG  57 33
CYD39_RS12235 2497780 .. 2497805 -  -9.7  -3.06815   ACCTGTTTTAACACA         CTGCCCTGTCA AAAA TGGCAGGGCAA          GACCGCACCTCACAC  71 57
        xapA 2495896 .. 2495910 -  -9.2  -4.03234   TTGCCGTGAGATAAA               GCCCCA ATA CGGGGC               CGTAGTCATTGTGTT  80 40
CYD39_RS12220 2494578 .. 2494607 -  -8.6  -4.82901   CCTTGTTCATAAAAA       TGGACTGGCGAA CATCCT CTCGCCAGTCAA        ATAAAATTAATGTGC  89 32
CYD39_RS12215 2494393 .. 2494403 -    -4  -2.82933   CTGGAATTTACCATA                 TTAC TTA GTAA                 AAAATAGATTTAACG  45 19
CYD39_RS12210 2493206 .. 2493220 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC  93 266
        gltX 2491082 .. 2491110 - -13.3  -4.24413   CGGACTAACAAATAA        TAAACGGCAGG CGTCTGC CCTGCCGTTTA        TTCTGTTTCAGCTGG 100 43
CYD39_RS12170 NONE
CYD39_RS12165 2489874 .. 2489893 - -11.4   -5.2197   GACAAAAAGCAAAAA            CCCCCGCT TTTC AGCGAGGG             TTCGAATATTGGTGG 100 35
CYD39_RS12160 2487491 .. 2487508 - -12.7  -3.97368   CGTTTAATGTAGAAA             CCGGGGA GCTA TCCCCGG              TTTTTTTATGCCGCT 100 40
        mntH 2484642 .. 2484666 - -12.2  -3.38812   TCCTGCTGAATAACA         GCCCGATGACG CCCA CG-CATCGGGC          CTGCTATCTTTCTGT  85 43
CYD39_RS12135 2481022 .. 2481050 -  -9.6  -3.53444   TTAGCCGTCGTCAAA       CTCGCCG-CGC TGGTCATC GCGGCGGCGAG        CGGCTTTCGCGGCGG  71 328
CYD39_RS12125 2478804 .. 2478820 - -13.7  -5.64006   AGGCAATGAAAAAAA              CCGCGTG AGG CACGCGG              TTTGAGACTGGCAAG 100 134
CYD39_RS12120 2476939 .. 2476958 - -13.6  -5.33026   CAATGCAAAGAAAAA            CAGGAGCC ATGG GGCTCCTG             TTTGCTTTTCTACTC 100 35
CYD39_RS12105 2474548 .. 2474566 -   -16  -3.65812   TCCCGGGGAACAGAA             GCGCCGAC ATT GTCGGCGC             TATCTATTCGCTGAC 100 219
        pgtC NONE
        pgtB NONE
        pgtA 2468217 .. 2468230 -  -2.4  -2.71364   TTATCTGGCTAACGA               CATC GCTGCT GATG                TTGTCAGCCAGATTG  40 56
        pgtE 2467013 .. 2467044 -  -8.7  -4.72986   CACGTTCAGCAAAAA      GTCGTCATCGGCC GGTTAT GACCGATGACATC       CTGATGTGGTCTAGA  89 36
        mlaA 2464727 .. 2464745 -   -11  -4.78764   GAAACGGATCAAAAA             GGTGAGCA TTG CGCTCACC             TTTTTATTTACTGCC  95 43
CYD39_RS12055 2462693 .. 2462729 -  -9.4  -5.75599   GAAACGACAAAAAAA    GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG    AATGAACGGATTAAC 100 36
        fadI NONE
        fadJ 2458966 .. 2458979 -  -3.1  -4.56597   TGGCTGCGGCAAAAA               TG-CGG TGG CCGGCA               TTGTGCCTTATCCAT  64 151
        sixA 2458245 .. 2458258 -  -9.5  -2.84325   GGCGCCGAAAGAGTA               CGGCG GCGA CGCCG                CGCTGCTGGTGTTGA  64 178
        prmB NONE
        aroC NONE
        mepA NONE
CYD39_RS12015 NONE
CYD39_RS12010 NONE
CYD39_RS12005 2453011 .. 2453038 - -11.2  -3.08798   ATGGGTCAGTCAATA        GCGGAAGGCGGC AAGC GTCGCCTTCCGG         CCCACGGCGTTATTG  79 35
        fabB 2449568 .. 2449587 - -13.6  -5.26875   CCCTGAATGAAAAAA            CAGGTCGC ATTA GCGACCTG             TTTCATTATTGATAC 100 60
CYD39_RS11990 2448608 .. 2448646 -  -5.3  -4.82901   CTCGGCGGAGAAAAA  GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC   CTGGAAGTTTATACC  76 247
CYD39_RS11970 2447179 .. 2447215 -  -8.6  -2.60212   GCATTACTCCAGAAT    GCAGAGTAAGGCGGGG AAAGG CCACGCCCCCCTCTAC    CTGAACGTCAGGATT  63 153
CYD39_RS11965 2445774 .. 2445788 -  -7.1  -3.58536   AAATTCAGCCGCAAA               CGGTG CTGAC CACCG               CCCAGGTGCAGGATT  60 222
        pdxB 2443705 .. 2443734 - -11.5  -3.80279   TCCAGAAATACATAA       GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC       ATTAAGAAGACATTA  91 38
CYD39_RS11950 2442669 .. 2442686 -  -4.1  -2.62184   GCTGTCCGGACATCA             GTACAGA TACT CCTGCAC              CAGCTTCTCCGCAAT  44 5
        truA NONE
CYD39_RS11940 2441122 .. 2441134 -  -3.3  -5.24531   ACTTTGGATAAAAAA                GTGGT CGA ACCGC                TGAGTTACTTTCTAT  77 37
        accD 2440044 .. 2440076 - -17.1  -3.06515   CTTTACGGTGAAAAG      CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC      AGTTATCAGGCCTCA 100 31
        folC NONE
        dedD 2437874 .. 2437899 -  -9.8  -5.27938   ACGCGTAAATAAAAA         TGGCGCTGAA AAAATA TTCAACGCCA          TCACACTTTTTATCT 100 208
        cvpA NONE
        purF 2435693 .. 2435724 -  -9.4  -2.52464   GTGGTGCGTAATTGA      CATCGGCCAGCGGCA TTG CGCCGCTGGCAAA-G      CCATTAGCCTTCGTT  68 29
CYD39_RS11905 NONE
CYD39_RS11900 NONE
CYD39_RS11895 2430009 .. 2430033 - -14.9  -2.62613   CGTGAGGTCAAAGAT          GCCGCCGCGAC ATA GCCGCGGCGGT          TATGCGTTAACGCGT  89 32
CYD39_RS11890 NONE
CYD39_RS11885 2427923 .. 2427941 - -13.2  -4.37092   ATCGCGGTTACAAAA             TTGCCCTG AAA CAGGGCAA             CAGGGACAATAATGC 100 58
        argT 2426842 .. 2426865 - -10.4   -4.7497   CTTATGCACCAAAAA          GGTGCAAAAC ATCT ATTTTGCACC           GTGATAGTTCCCCAG  91 63
        hisJ 2425765 .. 2425776 -  -7.2  -2.62184   TTTTGCCTCACATCA                CGCC GGAT GGCG                 GCTGTGCCTTGCCCG  57 132
CYD39_RS11870 NONE
CYD39_RS11865 NONE
        hisP 2423402 .. 2423414 -  -9.1  -4.07568   CGGGCGCTGCCAAAA                CGGCT TGA AGCCG                CCGGATTCGCATTTC  80 136
CYD39_RS11845 NONE
CYD39_RS11840 2420424 .. 2420438 -  -2.1  -3.12402   TAAATTACGAGTTAA               TTGCA ACCTG CGCAA               TGATACTTTGATCAT  42 0
        yfcD 2419742 .. 2419771 - -10.1  -3.74224   GTTAAATCAGGGAAA       CTGGA-GCGATCGA AAA TCCATCGCCTCCAG       TTTATGTATGCGGGA  74 56
CYD39_RS11825 NONE
CYD39_RS11820 NONE
CYD39_RS11815 NONE
CYD39_RS11810 NONE
CYD39_RS11805 2414502 .. 2414530 - -11.8  -4.20084   ATCATTGATCCAAAA       TGCCGGATGAGCA CCAG CGC-CATCCGGCA        ATATCTCCATGATTA  95 38
CYD39_RS11785 2408493 .. 2408512 - -10.8  -5.53991   TAGCGATGAAAAAAA            GAAGGCAT TGGT ATGCCTTC             TTTTATATGCGTAAT 100 51
CYD39_RS11780 NONE
CYD39_RS11775 2407263 .. 2407280 - -14.1  -2.70946   TTCTGCCATAAATAT             GCCCCGC CAAA GCGGGGC              GATATCATGATCAGG  87 36
CYD39_RS11770 2404992 .. 2405013 -  -4.3  -5.10497   AAGCGATCGAAAAAA           TCGCCCAGC AAAA GCTGGTTGA            TATGGCGCCGGATGA  80 400
        lrhA 2401447 .. 2401480 -  -9.6  -5.61596   ATGGGCACAAAAAAA     GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC     TTTTTTACATTTACG 100 64
CYD39_RS11745 2400979 .. 2400997 -  -2.4  -6.13503   GAGGAATAAAAAAAA             CCCTACAA TTA CTGTAGAA             AATGATAAAAACAGC 100 315
        nuoA NONE
CYD39_RS11735 NONE
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 2390887 .. 2390902 -  -2.5  -3.18199   TAATGGTTAAGGCAA              GCATG TTCATC CACGC               ATCTCACTTACTGAA  45 16
        nuoL 2388963 .. 2388981 -    -3  -2.80966   AGGGAATCAATATTA             GCCAGGGT AGT AACATGGC             GATTTTTATTCCTTT  41 99
        nuoM NONE
        nuoN 2385893 .. 2385909 -  -9.5  -3.29829   CACAGGTTTTCATAA              GTTGGAT GCA ATCCAAC              ATTTAGAGGCTCCGG  74 101
CYD39_RS11675 2375359 .. 2375370 -  -7.2  -3.30124   CTGCAGGCCGGATAA                GGCG TAGC CGCC                 ATCCGGCATAAATGT  63 63
CYD39_RS11670 2372858 .. 2372888 - -18.4  -3.05715   AAGCGCCTGACGTAA       CAGGGGATGCCTAC AGT ACAGGCATCCCCTG       ACGCTTAGTGAGACA 100 30
CYD39_RS11655 NONE
        elaB 2369907 .. 2369923 -  -6.5  -4.56597   CCTCCCTGTTAAAAA              CCCCACA TTA TACGGGG              TACTGCCCTAAAAAA  76 88
        menF NONE
        menD 2366841 .. 2366856 -  -4.7  -3.00923   GTGCAACATCATAGA              TGGCT TACCTG AGCCA               AAAGTTGCTGCAACG  49 3
        menH 2366093 .. 2366103 -  -5.4  -3.41125   GTCAGAGACGCAGAA                 TCTG AGC CAGA                 CTGTCTACCACGCCA  56 1
        menB NONE
        menC NONE
        menE 2362817 .. 2362831 -  -2.1  -3.21924   TGATTGTTCATAACA               CGTTA CACAT CAACG               GATAAACAAAACGGC  44 75
        pmrD 2362358 .. 2362408 -    -2  -2.98387   TGGCATAAAACATTA CACAC-GCTCGCG-CTCAGTAAAGC CTAT GCGCTACTGAGTCTC-AGCTATGTG CTTGTCTGGGTAGCC  40 143
        pmrG 2354234 .. 2354255 -  -5.8  -2.86271   GGGTTATTATAATGA           CGACAGCC GCTTCA GGCTGTCT            TTACGCTTTTAACAT  51 45
CYD39_RS11565 2352990 .. 2353007 -  -9.1  -4.30576   CCGTTAGCATCAAAA             GCTGGCG TTTA CGCCAAC              ATAAGGGCCGTCAGC  85 2
CYD39_RS11560 2351604 .. 2351636 -  -8.5  -2.63752   AAAAGCAGATAATAT     TGCCGGATAATGGC ATAGCG GCC-TTATCCGGCT      CACGATGTCGTTCCC  63 62
CYD39_RS11555 NONE
        rhmD 2349374 .. 2349385 -  -4.4   -3.1978   ATGCTCATAGCAATA                TCCT CAAC AGGA                 TGAGGGCGTTGCCGT  50 62
CYD39_RS11545 2348084 .. 2348094 -  -2.4  -2.86582   AGATAAGATTAATGA                 TGCG CAG CGCC                 GGATTGCGCTACCGG  41 8
CYD39_RS11540 NONE
CYD39_RS11535 2347028 .. 2347062 -  -5.9  -3.65696   AGCCATATAAACCAA    TTTGAGGATGGGAAGGC CAG GCCTTCCCA-C-TAAAA    GTTCTATGCCGTCAA  59 29
        glpT NONE
        glpQ 2338659 .. 2338711 -    -9  -3.54543   ACTTACGCTGGCAAA CGTTGCGCCAGGCCGGATGAGG CGTTTATGC CCTCATCCGGCGCGTCACTTCG ACTATGGCAAACCTT  73 40
CYD39_RS11495 2336328 .. 2336353 - -16.3  -2.87931   TCCAGCCGGGAGAGA         TTTTGCCCTGC TGCT GCAGGGCAAAA          GGCGATATCGAAATC 100 51
CYD39_RS11465 NONE
CYD39_RS11460 2327816 .. 2327837 -  -5.7  -2.52464   GTTGGCGGCAAGTTA           CTCGGCCCA TCCC TGGGCCCCG            CCCCGTCGGGGTTAG  49 140
CYD39_RS11455 2324872 .. 2324889 - -14.1  -5.29846   AACGGCAAAGAAAAA             GGGCCGG ATAT CCGGCCC              TCGCACAGCAATAAC 100 42
        rcsC 2321611 .. 2321649 -  -7.5  -4.36914   GTCTGCTGGAGAAAA  TCAGCG-CAGGCGGTTAC GGCG ATAAGCGCCTGTCGCCAA   AAGAGAGCGAAGTAT  77 318
        ompC 2316604 .. 2316617 -  -9.5  -5.18357   TAAGGCATGAAAAAA               GGGCC CGCA GGCCC                TTTAGCAACATCTTT 100 47
        apbE NONE
         ada NONE
        alkB NONE
CYD39_RS11415 2311750 .. 2311788 -  -8.8  -3.32844   GCCGTCACGCGATAA   TGTTACGCTGCCCGGTCA CAC TTACCGGGCATCTGAACA   TGTCGACTCACGCAG  69 195
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC NONE
        ccmA NONE
        ccmB 2303566 .. 2303592 -  -2.9  -4.39386   CTGAAACCAGTAAAA        TGTCCGTCGCGC CGGG GCGCTACTG-CA         CGCTGAGGCGCAGCG  60 18
CYD39_RS11360 2302790 .. 2302802 -  -6.2  -2.50493   TCCACGATGAAAATG                CCGG ACTCA CCGG                TGCCCCCTTTTCAGT  53 19
        ccmD NONE
        ccmE NONE
CYD39_RS11345 NONE
        dsbE NONE
CYD39_RS11335 2298549 .. 2298582 - -16.7  -3.75105   GGAATGCAGTAACAA     GCCAGGCCCGATGGCG CCA CGCCACCGGGCC-GTC     AGGGTCTTATTTCTC 100 32
CYD39_RS11320 2296151 .. 2296168 -  -8.4  -4.57341   AATTCCCCTTAAAAA             CCAGCC TCTCAG GGCTGG              TTTTTTTATGCCTGC  87 373
CYD39_RS11295 NONE
CYD39_RS11290 2292044 .. 2292059 - -11.8  -5.10208   GAAGTTGAAGAAAAA              CCCCGC CCCG GCGGGG               TTTTTTTATGCGTTT 100 96
        rsuA NONE
CYD39_RS11270 NONE
CYD39_RS11265 2286620 .. 2286639 -  -3.4  -3.71924   CAAATTATCGAAGAA            GGCCTGCG CGTC CACCAGCC             TACGCTTTCAGGCGC  51 438
CYD39_RS11215 2275135 .. 2275153 -  -4.6  -3.42257   CGGTAAATACATCAA             TGATAGAT ATA AACTATCA             AATTCATGATATCGA  52 323
CYD39_RS11210 NONE
CYD39_RS11205 2274070 .. 2274086 -  -2.1  -3.19602   CGCTGTATACCAATA              CCATTCG CGT CGGCTGG              ATCATTGCCGGTTCG  43 213
CYD39_RS11195 NONE
        fruK NONE
        fruA 2268849 .. 2268866 - -11.3   -5.4833   TCAGGCAATAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTAGCGTGTTT 100 44
CYD39_RS11170 2265816 .. 2265826 -  -6.8  -4.80882   AGCGGATACTAAAAA                 TGGC GAT GCCA                 CCCGGGCAGCCCTCC  80 50
        lysP 2264098 .. 2264115 - -11.3  -6.07374   AGAAAAAACAAAAAA             CCCTCTC GAAT GAGAGGG              TTAGAAGGGTCAGGT 100 102
        cirA 2261815 .. 2261849 - -16.4   -2.5294   CATCGGTTATAACAT     TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT     CTCTGTCAGAAACGG 100 31
CYD39_RS11145 NONE
CYD39_RS11140 2257356 .. 2257369 -  -8.1  -2.60392   TAGCTGCGAATTAAT               GCTGG CCAG CCAGC                CGCAGGACGCCATTC  56 247
        folE NONE
CYD39_RS11125 2254534 .. 2254546 -  -3.4  -3.90318   GGACTACGTGAGAAA                CATC ACAGG GATG                GAAACGGTTACAGCG  55 69
        galS 2253372 .. 2253389 -  -6.3  -4.21989   CACAATGTTAATAAA             CTGTGAA TTTA CTCACAG              ATTGAAAACGGTTAC  70 54
        mglA NONE
        mglC 2249180 .. 2249208 - -10.2  -3.14211   AGCTCGCGGTATGAA       GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT        TATCTGATAAGCAAG  74 58
CYD39_RS11060 2240689 .. 2240701 -  -3.3  -2.89881   GATTTATTTCAGACA                TGGAG ATT CTCCT                TATTCGTTTACGACG  44 25
        gtdA 2239659 .. 2239669 -  -2.4  -3.81146   CTCCCTAATTAATAA                 CGTG CTT CGCG                 GAACAGCCCCAGGGC  51 8
CYD39_RS11050 NONE
        maiA NONE
CYD39_RS11040 2236988 .. 2237008 - -11.9  -5.58454   TCCACAGCAAAAAAA            GAGGCGCTA TCA TAACGCCTC            TCTGCGATGAGCAAA 100 91
        dusC 2235749 .. 2235766 -  -6.3  -2.50575   AAAAGTCCCACTAAC             CCGTTCA TAAA TGAACGA              TTTTGCTGCAATACC  53 286
        mdtQ 2234122 .. 2234137 -  -3.2  -2.71011   ACCCTGTCTGAATCA              TCCGGA AAAA TCAGGA               ATGATAACCGCCGCC  43 20
CYD39_RS11020 2233282 .. 2233296 -  -4.9  -3.32963   ATCCGGATGGCATAA               CGCCG CCATC CGGCA               CCCGGCGTTTATTTG  54 34
CYD39_RS11010 2231861 .. 2231881 -    -9  -2.79302   AGCAGTGGCATCATA           GCGGC-ACG CCAG CGTTGCCGC            TACAGAAGAATCGTC  66 85
CYD39_RS11005 2230647 .. 2230665 -  -3.7  -3.88787   GGACATCTGTATAAA             GCGCCGG AAACG CTGACGC             GTTTTTATCGGCAAA  56 188
        bglX 2226442 .. 2226460 -  -8.8  -2.88663   AGTCATTGCCAGACA             GGGCGC TGCTATC GCGCCC             TGTTGACGGCAGGCT  65 40
CYD39_RS10990 NONE
CYD39_RS10985 NONE
CYD39_RS10980 NONE
CYD39_RS10975 2222326 .. 2222336 -  -6.8  -4.37092   ATGGTGCGGAGAAAA                 CCAG ACG CTGG                 CGCAGCAGCAGCAAC  74 238
CYD39_RS10960 NONE
        yehT NONE
CYD39_RS10950 2218028 .. 2218045 -  -2.7  -3.34102   CGATCAGAAAAACGA             TACTCTC CAGG GAAAGCA              AAATAACATGACAGC  47 512
        apbC 2213701 .. 2213736 - -17.2   -3.1478   ATTATTTTATTAATA    CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG     TCATATTCTCTTTGG 100 56
CYD39_RS10925 2213160 .. 2213189 - -18.1  -5.82036   ACAACAAATAAAAAA       GCCCATATCATTG ATAT CAATGATATGGGC        CTGCGGAATTAATAA 100 44
        yehD 2212370 .. 2212389 - -12.8  -5.24129   CTTGCTTATAAAAAA            CCGGCGAC GAAC GCCGCCGG             TTGAATAAATTAGTC 100 35
CYD39_RS10915 2211616 .. 2211647 -  -2.3  -4.70772   ACAGAGTCAATAAAA      CAAGCGAAGCGATG GGCGT CATC-CTTGGCATG      ATGAACTCCTGTTTA  64 38
CYD39_RS10910 NONE
CYD39_RS10905 2207878 .. 2207898 -  -8.2  -5.64274   TCATCGATAAAAAAA            GCCCCCTC ATCCA GAGGGGGA            AATACAGCCCCATGT 100 261
        thiM NONE
        thiD 2205567 .. 2205579 -  -4.8  -2.66964   GTAGGCAGTATACTA                CCAC CACGC GTGG                AAATGATGTACCGGA  48 10
CYD39_RS10885 2204526 .. 2204567 -  -5.1  -3.59315   CGAAGCATGGGTAAA CCG-CTTTTCCGCGCCGC TGGTGGT GCGCCACGATAAAGACGG AGCGTGGTATTTTAG  55 240
        fbaB 2199784 .. 2199798 -  -8.5  -3.99805   CCGGAAAAACTTAAA               GCCGC GTTGG GCGGC               GTCTCCTATCTTATT  74 495
CYD39_RS10855 NONE
CYD39_RS10850 2197467 .. 2197490 - -12.5  -3.30214   AATTGAGCACACTAA          CCAAAGCGC AAATGG GCGCTTTGG           TTTACAGACCTCCCC  90 413
CYD39_RS10835 NONE
CYD39_RS10830 2194596 .. 2194611 -  -6.2  -4.77165   TTTTTCATAATAAAA              TCTACT AATA AGTAGA               TTCAATAGATTCCAT  80 287
CYD39_RS10825 2193952 .. 2193966 -  -2.9  -5.28561   AACATATAACAAAAA               TATGT TCACG ACATA               TCCAATTAATATTTC  76 84
CYD39_RS10820 NONE
CYD39_RS10815 NONE
CYD39_RS10810 2192266 .. 2192283 -  -2.7  -4.36903   TCTATCAAACATAAA             TAACCTA TCAT CAGGCTA              TTAATCACAACATTC  60 26
CYD39_RS10805 NONE
CYD39_RS10800 2191160 .. 2191176 -  -3.1  -3.13177   AGATTTGAGACTTAA              TTAAACA TTT TATTTAA              GTTAATCATTATCAT  46 27
CYD39_RS10795 NONE
CYD39_RS10790 NONE
CYD39_RS10785 NONE
CYD39_RS10780 2188817 .. 2188827 -    -4   -3.5125   TTTTCAATTAAAAAC                 TCAT GAT ATGA                 TTGCTAAATAAGCAT  52 40
CYD39_RS10775 2187495 .. 2187509 -  -7.2  -3.69621   ATCTACAACCTGAAA               CTTATC AAA GATAAG               CTATCGGCCCTGCCG  65 519
CYD39_RS10720 2171334 .. 2171358 -  -6.4   -3.5394   AAAGCGCTTTCCAAA         CAGCTACCGGG CATA CCCG-TCGCTG          GCGGCGATGATTTCG  57 174
        alkA 2168768 .. 2168781 -  -3.7  -4.08767   GCGACTCTGCGAAAA               CTGCG GCAA CGCGG                CTGCCAGGTGATTCT  60 312
CYD39_RS10700 2165073 .. 2165098 -  -2.6  -3.14132   CCTTTCGCGCATCAA         GCCCTTAA ATCAAGCACA TCAAGGGC          TAACCAGGTTATCAC  45 65
CYD39_RS10695 2164443 .. 2164460 -  -2.6  -2.53263   GCTACCCTCAATGGA             CCGGCA GTATTG CGCCGA              ATGGCTCAGTCTTTA  40 31
        asmA 2162251 .. 2162263 -  -6.2  -3.83026   TTCCTGGACAGCAAA                CGGC CATAT GCCG                CTGGAGGATTTGGTG  63 333
CYD39_RS10680 NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 2151320 .. 2151337 -  -4.1  -3.54424   TTTCATTTCCTCAAA             TAGTCCC GTTA GGGAGTA              ACTTTCTGAACGCGC  52 16
         gmd NONE
CYD39_RS10630 NONE
CYD39_RS10625 NONE
        wcaI NONE
        cpsB 2146071 .. 2146095 -  -3.5  -3.30124   GCTTATCGGGCATAA          TTGCAGGCG TCAGACC CGCCCGTAA          CGGTCCTCAAACCGC  48 10
        cpsG NONE
        wcaJ 2143091 .. 2143106 -  -4.6  -2.60508   CAGCGCGGAAAAACC              GGAGCG TACA CGCTGC               CCTGGTGCAATATGG  46 70
CYD39_RS10600 NONE
        wcaK NONE
        wcaL NONE
        wcaM 2137586 .. 2137596 -  -2.6  -3.14211   ACTTTTTCCCAGGAA                 TTTT CGT AAAA                 ATAGCGATACTTACC  45 36
        galF 2136442 .. 2136493 - -10.1  -4.75518   TATACAAAACTAAAA CGGCAGTCAACACTCGTTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA  91 68
        rfbB NONE
        rfbD 2134151 .. 2134164 -  -8.1  -4.55287   CTCATTCATAGAAAA               TGCCC TGAT GGGCA                TTTAAATTTATCAGA  82 36
        rfbA NONE
        rfbC NONE
CYD39_RS10555 NONE
        rfbF NONE
        rfbG NONE
        rfbH 2128499 .. 2128515 -  -3.1  -4.43576   ACCAGATAGAATAAA              TTAAATT AGA AATTCAA              ACCAAAGAACTCTTC  62 14
CYD39_RS10535 2127564 .. 2127584 -  -3.3  -4.28548   ATTTATTTATTAAAA            GATCATGAA AAT CTCATAACC            GTTTCAGTAGTTCTT  60 18
CYD39_RS10530 NONE
        rfbV 2125158 .. 2125177 -  -2.2  -3.97636   AGCTGAATCCAGAAA            GGTTAAAT CTAC ATTTAATC             TCAATATAATAACTT  53 45
CYD39_RS10520 NONE
        rfbN NONE
CYD39_RS10510 NONE
        cpsG NONE
CYD39_RS10500 2118373 .. 2118396 -  -9.6  -2.72511   GTCAGGTGTGGAAAC          CCTGCCACAA ACGG TCATGGCAGG           TTAAAGGTGAATAGT  69 139
        gndA 2116903 .. 2116921 - -11.7  -6.06529   TAGAGATAAAAAAAA             GCCCGGT ATTAA ACCGGGC             TTAAACATTTCGCAG 100 44
CYD39_RS10490 2115510 .. 2115529 -   -10  -3.10512   ATGGTCAATAAATCA            TCGGGACT CATC AGCCCCGA             TTGCCTTATTAATCA  73 34
        wzzB 2114343 .. 2114357 - -12.8  -5.48303   ATAAGCGTAAAAAAA               CCGGGC AAT GCCCGG               TTTTTTAATGAGAAA 100 80
CYD39_RS10435 NONE
CYD39_RS10430 2104923 .. 2104950 -  -9.2  -5.63103   TTTGAAGCAAAAAAA        TAACCGACGCGT ATTA AAACGTCGGTTA         GTGTCATTTTTTGCA 100 127
        yoeI NONE
        plaP 2103362 .. 2103380 -   -16  -5.43414   ATGACAGACAAAAAA             CCGGAGGC ACT GCCTCCGG             TTTTACTATTGCCGA 100 53
        phsA NONE
        phsB NONE
CYD39_RS10390 2094822 .. 2094857 -   -12  -2.99251   CAAACATGGATAAAT    TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT     GACATTATTTTATGG  81 47
        dacD 2093456 .. 2093471 -  -3.3  -2.79796   CGTCACTTCACTATA              CTGTA TGAATG TACAG               TATAATTACAGCCTT  43 137
        sbmC NONE
CYD39_RS10375 2091669 .. 2091682 -  -2.3  -3.53012   CGCCGTCTGGGGAAA               CCTGA AGGT TCGGG                GATAAAATCGTTGCC  47 131
CYD39_RS10370 2091166 .. 2091200 - -10.7  -3.53563   ACAGGCGGGGTCAAA     CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG     TAGCGCATTATTCGG  81 33
        pduF 2072974 .. 2072993 - -12.2  -4.47259   ATGACAATATCAAAA            GTCTCCCA TTGC TGGGAGAC             GTTTTGATCAGTTCG 100 113
        pocR 2071554 .. 2071567 -  -8.1  -2.82516   GTCGTCAGCATCACA               GCAGC GGGG GCTGC                GGGGGATTTTCACCC  60 411
CYD39_RS10250 2069984 .. 2069994 -  -2.4  -3.23715   AGAATCGTCATAATA                 CGCG CCT CGCC                 GCCGCCAGCCAGTGC  44 7
CYD39_RS10245 NONE
CYD39_RS10240 NONE
CYD39_RS10235 NONE
CYD39_RS10230 NONE
CYD39_RS10225 NONE
CYD39_RS10220 NONE
        cbiG NONE
CYD39_RS10210 NONE
CYD39_RS10205 NONE
CYD39_RS10200 NONE
CYD39_RS10195 NONE
        cbiM NONE
CYD39_RS10185 NONE
CYD39_RS10180 NONE
CYD39_RS10175 NONE
CYD39_RS10170 NONE
        cobU NONE
        cobS 2055950 .. 2055967 -  -4.8  -2.76696   CTCGTCCGTAATAAT             CGGCTC ATAATA GAGCCA              GCAGAAAGATCAGTT  49 12
        cobT NONE
        ldtA 2053705 .. 2053723 - -12.4  -4.81551   GACGCATATGAAAAA             CCTCCGGC GAT GCCGGAGA             AAAGATTTATGACTT 100 152
CYD39_RS10135 NONE
CYD39_RS10130 2049614 .. 2049633 -  -6.4  -2.78463   ATCCCCCCCATGACA            CTGTAGCT AATA AGCAACAG             AGTAACCCTTTCAGA  53 173
CYD39_RS10125 2048661 .. 2048689 -  -3.1  -3.39327   TCTGTAGACTTATAA        TTGCACCAGCTCT TCA AAAAAAGGTGCAA        TATCTCTATTAGTGA  48 34
        gapA 2047563 .. 2047598 - -13.4  -3.49858   TGAATTATATTATAA    GATCTAAAAAGGCGGC CGAA GCTGCCTTTTTAGAAC     CGTTGGTTATCTTAG 100 42
CYD39_RS10105 NONE
CYD39_RS10100 NONE
        arsD NONE
        arsA 2041065 .. 2041075 -  -2.4  -4.25104   CCTGTCCGAGCAAAA                 TGCC GAT GGCG                 ATGCAGAGCGCAACC  57 120
CYD39_RS10070 2037816 .. 2037829 -  -2.3  -3.36273   CGGGGCGAATATTAA               CGAGG TGCC CCTGG                CTTGTCAAAGCCTGT  45 127
CYD39_RS10065 2037623 .. 2037650 -  -9.8  -5.22312   ATGGATATCAAAAAA        CCCGGCAAACCT TCTC AGGTCAACCGGG         TAAAGATAAGTTATT 100 90
CYD39_RS10060 NONE
CYD39_RS10055 2036437 .. 2036451 -  -4.2  -4.25502   TTTAAAAAGAAAAGA               GAGCTA TCT TAGCGC               CACCATCATCGCTCA  66 84
CYD39_RS10045 2034744 .. 2034787 - -16.8  -3.29043   AAGCTCGCGGCACAA TAAGGCCTTAGCGGGATGCA AAAT CGCCTCCCGCTAAGGCTTCA TTCAGCCGCTTTTCA 100 98
CYD39_RS09995 NONE
CYD39_RS09990 2019999 .. 2020010 -  -4.4  -3.24411   ACTTCGGCAAAGAGA                CCAT TATG ATGG                 TGACATGATTATTTG  50 260
CYD39_RS09970 2016172 .. 2016193 -  -2.1  -5.00884   ATCGCTTGTAAAAAA           CTAGGTTGG TTCA CCAGCCCTG            AACCGGAGGGATGTT  69 98
CYD39_RS09965 2015846 .. 2015884 -  -6.1  -3.68222   TGTTAAGGGTAATAA  GATGCCCTGTGCGAACAG ATAT CTGTTCG-ACACGAGATC   CTATTTCTGTTTTTA  62 38
CYD39_RS09960 NONE
CYD39_RS09955 2014833 .. 2014843 -  -5.4  -5.45726   CAGACTTGAAAAAAA                 GAGA GAG TCTC                 TTATTGAATACTTTA 100 358
CYD39_RS09935 2011278 .. 2011307 -  -3.7  -4.12942   TTAAATCCTCTAAAA       CAGGG-ATATAG TGTTTAT CCATATTCCCTG       TTAAAGTTGTTGGTA  59 118
CYD39_RS09905 NONE
CYD39_RS09900 2007287 .. 2007323 -  -4.5  -3.83323   TGTACATAATGGAAA    CCTACTGTATGAAGA GACTGCA CCATCATACAGCAGA    TATGGTTCTATCATA  58 117
CYD39_RS09895 2005633 .. 2005646 -  -2.4   -3.9941   TGGGCCAGAAGGAAA               TCAG ATACCA CTGA                TGCTGACCATGATAA  54 374
CYD39_RS09885 2003196 .. 2003215 - -10.8   -4.7629   GGATGAATTGAAAAA            GGCAAAGA TCGC TCTTTGCC             TTTTGGGAGATTTAA  95 297
CYD39_RS09880 2002500 .. 2002521 - -10.9  -4.48713   TTTAGCAATAAGAAA           GAAAAGGGC CTGC GCCCTCTTC            GTTAAATAGACGTGA  93 27
        pilV 2000944 .. 2000970 - -13.2  -3.20232   ACAAGATAATATATA         TGAGGAAGAATA CTA TATTCCTCCTCA         TTGACAATAAGCGTA  91 89
CYD39_RS09855 1997558 .. 1997583 -  -9.1  -5.99154   CAGTAAATAAAAAAA         CACAGGGAG-GT TTT ACTCTCCCTGTA         ACTTGTCACTTACGC 100 31
CYD39_RS09835 1994874 .. 1994886 -  -2.7  -2.87527   TATGTATGACGAAAT                CAAAA ACG CTTTG                TCAGTGATTGATTTT  42 51
CYD39_RS09830 1994286 .. 1994299 -  -3.9  -3.82117   GGCATTCATAAAAGA               GTTTT TTGA AAAAC                ATGAAGGGAGATGAA  55 420
CYD39_RS09820 1992752 .. 1992762 -  -5.4  -3.44229   ACTGGAGGATGAGAA                 TCAG CCG CTGA                 AGAAGCTGGTCGCTG  57 339
        ghrA 1987805 .. 1987820 - -11.8  -3.64703   CGTTTTTTAGCGAAA              CCCGGC CCGC GCCGGG               TTGATGTCAATATCC  89 32
CYD39_RS09770 NONE
CYD39_RS09765 1986412 .. 1986425 -  -5.3  -3.08679   CCGTTGCAGTTAAGA               GTGAT TTAC ATCAC                ATTATTCTTCATCTT  51 27
CYD39_RS09760 1985819 .. 1985839 -   -14  -4.07455   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTTATTTTGTGA 100 30
        csgB 1982194 .. 1982208 -  -3.6  -4.11216   CTGCCACTTTTAAAA               GTTTCA TGG TAAAAC               CCCCATCGGATTGAT  57 59
        csgA 1981704 .. 1981719 - -10.4  -5.75342   CCTCCCGAAAAAAAA              CAGGGC TTAC GCCCTG               TTTTTTTATTAGCGC 100 51
        csgC 1981357 .. 1981367 -  -3.2  -4.77036   CGCCACCATCAAAAA                 CTAC TGT GCAG                 AAGGCGGCCATTGTT  69 15
CYD39_RS09720 1980899 .. 1980911 -  -3.3  -2.82015   TTTATATCTATGACA                CCGCC GTT AACGG                TACTCAATATTCATC  43 19
CYD39_RS09715 NONE
CYD39_RS09710 1978822 .. 1978832 -  -4.6  -3.39534   GGTAAAACAAGAAAG                 CCGC GCC GCGA                 TCGGGTAGTTTTCCG  52 50
        mdoG NONE
        mdoH 1973303 .. 1973321 -   -11  -4.91511   ATTTCACTATAAAAA             TACCGGCA TCA CGCCGGTA             TTTTTCACCTCACTC 100 47
CYD39_RS09690 1973015 .. 1973027 -  -6.2  -2.52015   TTGATACCGAGGAAG                GCCG TACTG CGGC                AGACGAATGGGATGA  53 48
CYD39_RS09670 1968993 .. 1969026 - -16.8  -3.53761   TAACGCCTGGCGAAA     TGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCA      AAATATTACTCAGCC 100 31
        rimJ NONE
CYD39_RS09610 1960070 .. 1960083 -  -2.3  -2.62515   AATGTTCTCACATTA               CTCTC CCAG GTGAG                CTAACAAAGAATCCA  39 9
CYD39_RS09605 1958901 .. 1958911 -  -3.2  -2.59881   CATCGACCGGATAAC                 GCAA CTT CTGC                 CGTATCCGGCTGTAT  42 256
        murJ 1957052 .. 1957064 -  -3.3   -5.1101   CGATTACCGAAAAAA                CGCAG CAT CTTCG                CGACCTCAACCAGCA  76 264
        flgB NONE
        flgC NONE
        flgD NONE
CYD39_RS09565 NONE
CYD39_RS09560 NONE
CYD39_RS09555 1951215 .. 1951246 - -11.4  -3.09004   TCATCTTCAAAATCA      GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC       CCTTAGAGTTGCGTC  79 28
        flgH NONE
CYD39_RS09545 NONE
        flgJ NONE
        flgK NONE
        flgL 1945671 .. 1945699 - -14.6  -5.55664   TGACGACTAAAAAAA        TGCCCGCGCC GGGGTGGAT GGCGCGGGCA        GACAAAACATATCCA 100 69
        rluC 1940718 .. 1940744 -  -2.8  -2.81535   TTATGAGAAAAGTGA         GATTCGGGCAGA TAA CCTGCCCGAGAG         AGGAACTATTTTGCG  41 31
CYD39_RS09515 1939743 .. 1939769 -    -3  -3.14344   TATTCTCGCGAGCAA         CTCTCAGGAC GTTTACT GTCCTGAAAC         CTTCCCCTTGCGACT  45 107
CYD39_RS09510 1939390 .. 1939400 -  -2.4  -4.15543   CAAATACCCCTAAAA                 GCCG TTT CTGC                 ACGTGTTGGTAGTTA  57 49
        yceD NONE
        rpmF 1937783 .. 1937794 -  -5.8  -2.62184   TCGGCTTTTACACCA                CAGG CACG CCTG                 TGATGCAAAAGGCAT  50 55
        plsX 1936574 .. 1936607 -  -2.9  -3.57263   ACCGTTACCTGTAAA     CGTCTGGCACGCTGGC GGC GCCGGGGAGACAG-CG     ATATTATCTGTGCGC  50 29
CYD39_RS09485 1935592 .. 1935602 -  -2.4  -2.92669   ACTAGAAACGAATCA                 GCGC GGA GCCC                 CAGGTGAATCCACCC  41 1
        fabD NONE
        fabG 1933753 .. 1933766 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 145
        acpP 1933459 .. 1933485 - -13.1  -5.02287   GACAAAAAGATAAAA        CT-CAGGCGGTC GAAC GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
        fabF 1932121 .. 1932137 -  -7.2  -5.24531   ATGCCTGATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTATTAATGTCT  91 55
        pabC NONE
        yceG NONE
CYD39_RS09450 NONE
        holB NONE
CYD39_RS09440 1927749 .. 1927767 -  -8.2  -2.77899   TTTGCTTATTAATTA             CGAGCTTT AAA AAAACTCG             TTTAACGGATTGATG  60 27
        ptsG 1925997 .. 1926014 - -12.7  -5.14965   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC 100 52
        hinT NONE
CYD39_RS09420 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
CYD39_RS09400 1919603 .. 1919618 - -10.4  -5.80817   TTGAACATAAAAAAA              CCAGCC GCAA GGCTGG               TTATCCGGTCACTGA 100 63
CYD39_RS09395 1918059 .. 1918090 - -13.8  -3.42583   GCAAGAGATGGAGAA      GCG-CTCACCGGC GCGAGCA GCCGGTGAGGCGC      AGAGAAATTAATGCA 100 33
CYD39_RS09390 1917331 .. 1917357 - -10.1  -5.93809   TTCGGATAAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC 100 48
CYD39_RS09380 1916100 .. 1916121 - -15.9  -5.28176   CTGACCGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTCTTTTTATTG 100 75
        lolC NONE
        lolD 1909267 .. 1909300 -  -4.5  -3.83675   CAAGCCAATTAACAA     TGATAAAGGCGACGC CATT ACTCCGCCCCCATCA      GGCTCAGTTCCGCCG  58 9
        lolE NONE
        nagK NONE
        cobB 1906115 .. 1906134 -  -3.4  -4.19506   AGGCGAATGGCAAAA            CGATGTCG GCGA CGCCAGCG             CCATTTATGAAGAGT  58 151
        pepT 1899198 .. 1899210 -  -3.3  -2.64218   ACGCTTCACCACAAT                GCGTA ACA TTCGC                TACTGACCGCGCTTC  42 25
CYD39_RS09310 1897839 .. 1897867 -  -8.8  -2.71074   GAAGGATAAGAACAT       CGCAATGCCCGGC GACC GCCGGGC-TGACG        CAAACTATCCACAAC  64 30
CYD39_RS09260 1888177 .. 1888195 - -11.7  -5.29445   TGCTAATAATAAAAA             CGGGGAC GTTAA GTCCCCG             TTTTTGTTTTTAACA 100 51
CYD39_RS09255 1886563 .. 1886573 -  -6.8  -4.91194   ATAATAAATATAAAA                 GCAG TTA CTGC                 CTACCTCAAGAAGTA  82 91
CYD39_RS09210 1881192 .. 1881202 -  -2.6  -3.11584   ATTTAACAGAAACCA                 TAAA GTG TTTA                 GCCACTATAGAACAA  43 318
        pagC NONE
CYD39_RS09195 1879534 .. 1879555 -  -3.7  -3.94812   CCTGATGTAAAAAGA           CACCGCTCTG AAC CATAG-GGTG           TGAATTTCATTTTAT  57 358
CYD39_RS09190 1879145 .. 1879165 -  -9.7  -4.21319   ACTAACCTTAAGAAA            TGCCTGAAG GCT CATCAGGCA            TTTCCACTTCAACCT  84 34
CYD39_RS09180 1878090 .. 1878115 -  -4.8  -4.73613   CCACCAGGAACAAAA         TATGTTTCAG TCACCG CTGAAACAAA          AAACTGGCTTATTCA  73 197
CYD39_RS09175 1877703 .. 1877719 -  -6.5  -3.38361   AAAGTTCAACATCAA              GGCAAGC ATT GCTTGTC              CACTGACTACATAGG  59 166
CYD39_RS09170 1877160 .. 1877185 - -17.7  -3.12351   TTTCGCTACAGGCAA         TGAAGGCCCGT CTAA ACGGGCCTTCA          TTAACGCGATTATGA 100 35
CYD39_RS09165 1875400 .. 1875410 -  -2.4  -3.76586   TCTTAAACACAAATA                 CCCG GAT CCGG                 TCATTACGCCTCCCC  50 428
CYD39_RS09150 1872406 .. 1872423 -  -2.7  -2.62111   GCCGCAAAAAATGAC             TGAAGAA CAAT TTCATCA              CCGACAGGTCCAGGT  40 23
CYD39_RS09145 1871452 .. 1871467 -  -5.4  -2.82516   CGGGGCAGGATTATA              GAGCAT CGGG ACGCTC               CAGCGATCGATTAAG  50 5
CYD39_RS09140 NONE
CYD39_RS09135 NONE
CYD39_RS09130 1869206 .. 1869227 - -15.9  -3.21276   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 68
CYD39_RS09120 NONE
CYD39_RS09115 1867410 .. 1867428 -  -4.4  -4.20368   TTATTTCAACAGAAA             CTCAGCGG CCA CCGCGCAG             GTGGCCTTTTTTGAT  64 47
        zinT 1866651 .. 1866670 - -12.2  -5.63504   AACGGCAGAAAAAAA            GCTCGCTA TTCA TAGCGAGC             TTTTAACATTGCAAT 100 46
        aadA 1865708 .. 1865730 -  -2.8  -3.21395   ATGGCCCGCATAAGA          TCATCTGCT TACTTC AGC-GATGA           GAACCTATTAAGTAG  45 89
CYD39_RS09100 NONE
CYD39_RS09095 1864092 .. 1864117 - -11.1  -3.93236   TATGAAGGGTATAAA         CAAGGGAGGGG GTTA CTCCTCCCCTG          TTCGTTAATAATGCA  86 47
CYD39_RS09085 1862659 .. 1862672 -  -2.3   -2.9732   TGGGAAGCGAAACCA               CGTCT CTCC AGCCG                CTATTCCGCCACGCT  41 127
        leuE 1861909 .. 1861930 - -13.7  -2.60725   CGAAAGGAGAGCAAT           GACCCGCCG TTGA CGACGGGTC            CAGGTGGTTAAGACT  86 33
CYD39_RS09075 NONE
CYD39_RS09070 1861141 .. 1861169 - -13.9  -4.74706   TTCAATACGCAAAAA        CCGCATCACGC TGGCGAC GCGCGATGCGG        CTTCTGATTTAAAAA 100 74
CYD39_RS09065 1860178 .. 1860198 -  -5.5  -3.27298   GGTTGCAATCATTAA            TGATAACGA TTA TCTTTATCA            ACACCGAGTGGTTGA  54 174
CYD39_RS09060 1859739 .. 1859763 - -11.6  -3.63694   ATTCATTTTGAATAA          TAAAGGCTAC CTGTC GTAGCCTTTA          TTATCTCTGAAAGTT  87 47
CYD39_RS09050 1859035 .. 1859053 -    -6  -2.57581   TTAACTGAAACATAT             TTTCTTGC GCC GCATGAAA             CTCATTATCAGATTG  53 73
CYD39_RS09045 1858628 .. 1858657 -  -5.7   -3.8646   CATCAAGAAGGCAAA       CGGCTGGCG GATATTGCCCGA CACCAGCCG        CTAACGTTGCTATAC  63 89
CYD39_RS09030 1856087 .. 1856119 -   -12  -3.60296   TACGCTGATGGGAAA     CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG      TACGGTACTTGGCGT  81 96
CYD39_RS09020 1855431 .. 1855446 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAGCCC TAAT GGGATA               GGCTCTTAGTCCCTT  62 15
CYD39_RS09005 1852582 .. 1852606 - -12.9  -3.69354   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 147
CYD39_RS08990 1848005 .. 1848029 - -12.9  -2.69151   GCGTTTCAGACAGCA          CAAAGCCCGCA TAA CGCAGGCTTTG          TCGTGGTTTTTCCGG  84 54
CYD39_RS08985 1846512 .. 1846524 -  -5.5  -3.41798   CGGTAAAACAATACA                GGACT CTT AGCCC                CTACGGTAATGTCCG  56 73
CYD39_RS08980 1845558 .. 1845604 -  -8.8   -2.7752   TATAGGATCTGAAAG GCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACAC ATTTTATCCGGCGTC  64 39
        msrB NONE
CYD39_RS08960 1842025 .. 1842042 -  -2.5  -4.90217   GAAACAGATTAAAAA             GCGCGGG CTGG CTGGCGC              AAGTTCTGGGAATAG  70 213
CYD39_RS08940 1837446 .. 1837490 -  -3.6  -2.71731   CTGATGTGGTAAGTA TCACTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAGTTT TATCCCTCAGCGTCA  43 38
        selD NONE
CYD39_RS08930 1834125 .. 1834142 -  -9.8  -3.53012   TTTGCGCCGGGTAAA             GCCGCC AACGCG GGCGGC              GTGGCGACATCGGGG  71 271
CYD39_RS08920 1832451 .. 1832472 -  -4.3  -3.03124   GTGTACGCCGGAAGA           GGCGCTGGAG TAC CCCCT-CGCC           CCGGCGGATATTCCG  47 54
CYD39_RS08905 1829570 .. 1829589 -  -2.8  -2.62616   GCATGTTCGACAGGA            CGAATCAC CCGC ATGATGCG             CCTCCCGCCTGAAGG  40 10
        astA NONE
        astD NONE
        astB NONE
        astE 1824736 .. 1824766 -  -7.6  -2.90496   CTGTGTCCCAAATCA       TCCCTGTAATCCTA ACG TGAGCTTACAGGGA       CATTTATCAGGGCAG  59 32
CYD39_RS08880 1823884 .. 1823932 - -11.7   -5.0065   CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG 100 45
        osmE 1821441 .. 1821456 -  -7.5  -5.64274   GCAGGCACAAAAAAA              CCGGC TCGCAG GCCGG               TTTCCTTGAATGTTC 100 57
        chbB 1820804 .. 1820822 - -11.8  -3.38603   AAATACCCTTAAATA             CCGCAATA AAA TATTGCGG             TTAGTGTATGAAATA  85 70
        chbC NONE
        chbA NONE
        chbR 1818110 .. 1818131 -  -2.2  -4.15044   CCCGCTCGTAAGAAA           TAGCGTGA CGTTCC CCGCGCTA            TTGGGGCAAGCGTGA  55 69
CYD39_RS08840 NONE
        chbG 1815892 .. 1815913 - -15.9  -5.34055   ATAAACAGCAAAAAA           TGCGGCGCA TTCT TGCGCCGCA            AACTCAGGAGCTAAA 100 36
        cedA 1813135 .. 1813155 -  -9.7  -4.72272   GTCTGTCACTAAAAA            CGCCGGT CTCCAGT ACCGGCG            TTTTGTTTTTTTCTT  91 39
CYD39_RS08805 NONE
CYD39_RS08785 1806042 .. 1806064 - -17.8  -3.69395   GTCACCACGGAATAA           CCGGGTTACG TAA CGTAACCCGG           CGCAATATTACATCT 100 33
CYD39_RS08775 NONE
CYD39_RS08770 1803625 .. 1803646 - -10.3  -2.88758   ACAACCTTCGACACA           GACGAAAAT CGCT ATTTTCGTC            CGGCATGACGATGGT  72 135
        thrS NONE
        infC 1798433 .. 1798458 - -14.1  -4.66987   CATAGGCGAACAAAA         CCTGTGAAGCC CGAA GGCTTCACAGA          ATTGTTACTTGAAGG 100 43
        rpmI 1798165 .. 1798179 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  68 29
        rplT 1797744 .. 1797766 -   -12  -4.99568   GAACAGTAAATAAAA           GAGAGGGAGC CAG GCTCCCTCTT           TTCACTGGCTTATGC 100 35
CYD39_RS08730 1797546 .. 1797561 - -10.4  -5.76633   TCAGATACAAAAAAA              GCCTCC ATCA GGAGGC               TTTTTTGCGCTGTTT 100 50
        pheS NONE
        pheT NONE
        ihfA 1793649 .. 1793663 - -12.8  -5.64421   ACTTGAAAGAAAAAA               GGCCGC AAT GCGGCC               TTTTTAGTTATACGG 100 146
        btuC NONE
CYD39_RS08705 NONE
        btuD NONE
CYD39_RS08695 1790528 .. 1790543 - -10.4  -3.04144   CTTGTACTTTTAACA              GGGCGT GAAC ACGCCC               GTTTTTAATAAAAGT  73 150
        ydiV 1789569 .. 1789592 -  -3.1   -4.2679   CAACGGGCAGTAAAA          GACAGG-GTC ATAGG GCCTCCTGTC          TTCAGTGTAGACGGT  60 74
CYD39_RS08685 1788099 .. 1788139 -  -6.9  -3.91084   CTACTGTTAACCAAA TAGCGCTCCCGCCAGCAG ACGATG CTGCTGGCATCAG-GCTA  ACTTGAACAACTGAC  68 23
        ppsA 1782963 .. 1782998 - -15.4  -3.86524   ACACTGCGGTATAAA    TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT     TACACTACTTCTTCA 100 30
CYD39_RS08635 1776031 .. 1776041 -  -6.8  -3.14564   GGAGCGTTTGATTAA                 TGCG GCG CGCA                 GTACAGGTTTCGCCG  54 508
CYD39_RS08585 NONE
        menI 1763193 .. 1763207 -  -5.6  -2.71261   ACAACGTCACACAAT               CGCCGT AGT AAGGCG               CGAAGAACAGCACAG  50 2
CYD39_RS08575 1762636 .. 1762666 - -12.7  -5.45802   CCCGGAAAAGAAAAA       CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG       TTCCGGCCCCATCCG 100 256
        sufA NONE
        sufB NONE
        sufC NONE
        sufD 1756970 .. 1756980 -  -2.4  -2.65766   GGAAATGTCATACCA                 GGCC TCC GGGC                 AGTCGCTGACCGATT  39 7
CYD39_RS08545 NONE
        sufE 1755238 .. 1755262 -  -9.3  -3.60952   GAACAACAAAATACA          CGCTCTGTCCA CTC TGGATAAAGCG          ACGTCGCCGTCCGAC  75 79
CYD39_RS08535 1754113 .. 1754131 - -14.6  -4.57755   ACGCACGATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 54
        ttrS NONE
        ttrR 1739392 .. 1739407 -  -4.8  -4.99947   CTCAATTAAACAAAA              TTTGAT GCAA ATCAAA               GAAATAACGCAGTTT  77 46
        fumD 1738789 .. 1738800 -  -4.4  -3.39216   GCTTCACGTAAAAAT                CACA CCAA TGTG                 CTGATGCATATCCAG  51 343
        spiC NONE
        spiA NONE
CYD39_RS08435 NONE
CYD39_RS08430 1729714 .. 1729730 -  -2.9  -2.79878   CGTAGCGAGTCAAAC              CTCACGT GCT ACGTGTA              CGCTCCGGTTTTTGC  41 109
        sseA NONE
        sseB NONE
CYD39_RS08415 NONE
        sseC NONE
        sseD NONE
CYD39_RS08400 1725346 .. 1725376 -  -2.5  -3.53012   CGCCCGTTTGGTAAA       CCGGTTCTGGATG GCTGG CATCCAGCATCAA       GGCATGTCCATAGAA  48 328
        sseF NONE
CYD39_RS08385 1723688 .. 1723703 -  -3.2  -3.32516   AGAAAGCAATGAACA              TCCGGT ATAT ACCTGA               AAACGATTACTCCGG  48 32
CYD39_RS08380 NONE
CYD39_RS08375 NONE
CYD39_RS08370 NONE
        ssaJ NONE
CYD39_RS08360 NONE
        ssaK NONE
        ssaL 1719901 .. 1719923 -  -3.4    -2.882   CCTAAATATTGAAAG           CCAGGTATCA GAA TAAAACCTGA           TTTACCTTTACTTCA  44 10
        ssaM NONE
        ssaV NONE
CYD39_RS08335 NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssas NONE
        ssaT NONE
        ssaU 1711194 .. 1711208 -  -7.8  -3.21276   CGCTGCGCGATAATA               CGACGA TAG CCGTCG               CATGGCGGCTATTTT  64 481
CYD39_RS08280 1708922 .. 1708947 - -10.5  -2.70932   GTTCCTCGCTAATCA         TCGCCCCCGCAT TTC ATGCGGGGG-AA         TCTTATTTTCCGTTA  71 38
CYD39_RS08265 1704782 .. 1704795 -  -9.5  -3.05844   CGCTGGAGCGCAACA               CCGGC GCGG GCCGG                CTGGCAGGCTTTATG  67 460
        ynhF 1703742 .. 1703778 -  -7.4  -2.57211   ATCTCGCCGCATAAG   TCTGAGTACGCAGAAGG TACG CCTTCTGCGTT-TTAGA    GAGGGATAGAATAGA  57 70
CYD39_RS08240 1701495 .. 1701512 - -11.3  -4.57569   CGATGGCGGTAAAAA             GCGACCT TTAC AGGTCGC              TTTCCTCTTGCACAG 100 42
CYD39_RS08215 1698088 .. 1698100 -  -4.1   -2.5333   TGAACCATAACAGAT                TCCTC ATA GAGAA                TAATGAGGTTGAGTA  44 56
CYD39_RS08210 1697110 .. 1697166 -  -2.4  -3.22113   ATCGCTTCATAAAAC CTCCGTTACATGTGGTCGCCTGT TAAGTGTAAACC ACTGGCGAAAACATG-AACGGAA AGTCAACGAGTTGGC  44 43
        sodC 1696454 .. 1696470 -  -8.7  -2.95521   GCTACAGGAACTACA              GCGTATC TGC GACACGC              TCGCACATCATCATC  62 138
        slyA 1692791 .. 1692825 -  -9.3  -2.92613   CTCCACGCTAAACCA    GGCTTTACGTGTGGTC ACAT GGCCACACGT-ATGCC     CCTGCACCTCAATCG  67 34
        anmK 1690921 .. 1690934 -  -2.4  -3.33744   GGGTCCGGGAAAAAT               TCAG TTAACT CTGA                GTTATTGGGTTAGCC  45 16
        mliC 1690468 .. 1690502 -  -6.4  -4.11183   GTTGATCAGAAATAA    TCAGT-GGGTGGCGC TATTGT GCGCCCCCATACTGA     AAATCTCAACGCTTC  68 31
        pdxH 1689749 .. 1689762 -  -8.1  -2.57982   ACATAGCATAAAACG               GCGGA TTCA TCCGC                ACCAGTGCTTAAAAC  59 56
        tyrS 1688358 .. 1688377 - -12.2  -4.53398   GAACATCAAAAATAA            GGGAGTGA TTTC TCACTCCC             TGTTACTTAATGCCT 100 40
        pdxY 1687372 .. 1687387 -  -3.2  -3.90048   CGTGTCGCAAAAAGA              CCGACCG TTG CGG-CAG              CGCTTAAAGCGGAAG  54 110
CYD39_RS08090 1675626 .. 1675638 -  -4.7  -4.60041   AGCGATGGCGAAAAA                CGTGC GCT GCGCG                AAAAAGTGGCCGCGG  71 120
CYD39_RS08060 1668725 .. 1668756 -  -9.4  -3.28785   CGGCAAAATAGCGAA      TCATGTTACCGCCC CGCA GGGCGGCGACATTA       CTTAACGCAGCGCGC  74 23
        fumC 1666834 .. 1666853 -    -7  -5.44119   GCCAGTTGAAAAAAA            GCCTCGCG TCGC CGCGCAGC             GTCCCGCCGTGGACG 100 355
CYD39_RS08030 1661301 .. 1661327 -  -8.7  -2.56596   GCCTTTATCAAGTCA         TAGTGGCGATG CTCAT CACCGCCACTG         TTCAAAAAACAGACA  63 140
CYD39_RS08020 1659601 .. 1659613 -  -4.7  -4.36914   CTTCGCGCGACAAAA                TGCGC AAG GCGCG                CCTTCTGCGTCGTTA  66 483
        pntA NONE
        pntB 1653895 .. 1653912 - -12.7  -4.87786   TGAAGTTTATAAAAA             CGGCCTC CGAA GAGGCCG              CCGCACGTTTAAAAG 100 42
CYD39_RS07990 1652381 .. 1652391 -  -8.2  -2.82208   AAATCAGTTAGCACA                 GCGC ATT GCGC                 CAGCTCAGGCAGAAG  60 48
        mdtJ NONE
        mdtI 1651590 .. 1651626 -  -7.2  -3.21099   CTGGCGCAGGATTAA    TGCGGGAATCGCTGCC TGACC GGCAGCGATCGTCTCA    GGCAAATTTGATCAT  62 23
CYD39_RS07960 1647588 .. 1647598 -  -2.4  -3.37612   TTTAAGCGTAATTAA                 TCCC GTC GGGC                 AGCCAGTAATAGCAG  45 11
CYD39_RS07955 NONE
        bioD 1645345 .. 1645373 - -13.2  -2.73441   GATGATTTGTGAAAT        GACCGGCGAGTA TCAGT TACTCCCCGGTC        TGCTGATTGCCTGTG  79 67
CYD39_RS07890 1631578 .. 1631598 -  -8.1  -4.21908   GAGTACCAGGGAAAA            GGCCTGGCG TCA CGCGCGGCC            AAACTGGCGATGGAT  77 315
CYD39_RS07875 1630391 .. 1630423 -  -8.3  -4.67755   ATATTGATGTAAAAA      GCGCTGCCAGATCAC AAA ATGTTCTGGTCGCGC      GGCAATGTTACGTAC  89 33
        rspA NONE
CYD39_RS07865 1628029 .. 1628043 -  -4.2   -3.0644   AGGCAATCTCTAAGA               GGTAAG ATG CGTACC               ACTTACTCGCAATTA  47 47
CYD39_RS07860 1626574 .. 1626628 - -12.4   -4.9448   ACTGATTAAACAAAA GTGACCGGACAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGTC-GA-CAC GATTTAACTCGTCTG 100 29
CYD39_RS07855 1624917 .. 1624951 -  -4.3  -3.75153   GGTTGTGAAGGTAAA    TTCGCGCCA-GTCGAA CTGA TTCGTCTTGGCATGAA     CTGATACTACTGGCC  58 96
         dcp 1620519 .. 1620538 -  -5.1  -3.34398   GTTGCGTTTTAAATA            TGATATG TCTTCT CATATCA             TGTGATACAGTTCTA  54 315
CYD39_RS07825 1620233 .. 1620251 - -12.4  -5.88565   GTCAGAATAAAAAAA             TGCGAGCC TAT GGCCCGCA             TCGTATGCGCAATAT 100 75
CYD39_RS07815 1618620 .. 1618637 - -10.5  -5.81412   GGCAGGCAAAAAAAA             CCGCCGG TTCA CCAGCGG              TAAATGCTTGCATGG 100 267
        eamA 1615444 .. 1615478 -  -2.3  -4.03234   GTGCCGCCACACAAA    TACCG-GA-TCACCA ATATGCA TGGCGAATCACGGTA    TATGCTGCCGCTGAA  54 419
CYD39_RS07780 1613706 .. 1613739 - -13.9  -3.13639   AACCGCATTAAGACA     TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAC      AATGCGCCTTAGTGG  93 34
CYD39_RS07765 1609964 .. 1610007 -  -2.5  -3.21276   GCCCTGGCCACAACA TGCTCCT-TGCTCGCAGGTCT GAAA AGGCCTGCGAGTATAGCAG-A GGGTGCCACGCGACG  45 50
CYD39_RS07760 NONE
CYD39_RS07755 1608652 .. 1608667 -  -6.8  -3.55761   GATTTATCGGGGAAA              GCGTCA GCAA CGACGC               ACTGCCCTACCGCTG  62 32
CYD39_RS07750 1607344 .. 1607356 -  -2.6  -2.92442   ACTCAACACACTACA                GGCC GCGAA AGCC                AGGTGTGGGCGAAGA  40 173
        ompC 1604953 .. 1604969 - -10.1  -5.49234   ATAGTCAATAAAAAA              GGACGCC AGA AGCGTCC              TGAAATAATAAAAGA 100 127
CYD39_RS07690 1596118 .. 1596158 -  -6.2  -3.60035   GATAAAGAGAAGCAA  CCGCCGGTAGTCTC CATTACCTTCGCC GAGACTACCGGAGA  AACTAAACCGAGATG  62 47
CYD39_RS07685 1595061 .. 1595074 -  -8.1  -4.07678   GGCCAAAACAGGAAA               CGTCG CTGC CGACG                AACCTGATCACCTAC  77 294
CYD39_RS07655 1587750 .. 1587761 -  -2.2  -4.57569   TTACCCTTTGAAAAA                CCAT TGAT ACGG                 CGATTGTTATATAGC  61 187
CYD39_RS07650 1586618 .. 1586639 -  -8.1  -4.08216   TTATTCTCGGCAAAA           CCGGTAGCAT TAT ATG-TACCGG           TTTTATTTTATTCAC  74 37
CYD39_RS07615 1582719 .. 1582737 -  -4.5  -5.00616   GTCGTCTGGAAAAAA             GCCCGTT ATTAA AACGGGA             ACTGTCGGAAATGGC  80 427
CYD39_RS07600 1581305 .. 1581319 -  -2.9  -3.95836   ATCTTTAAAACAGAA               TTACT GATAA AGTAA               CAATCTTCAGGTCGG  54 61
CYD39_RS07595 1580119 .. 1580141 -  -2.6  -4.11484   TTCAATGTCTGAAAA           CACTACCACA TCT TGTGTCAGAG           GGCCGCTGCGCGCCA  56 85
CYD39_RS07585 NONE
        nhaC NONE
CYD39_RS07575 1574318 .. 1574334 - -10.8  -3.05384   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT  76 96
CYD39_RS07540 1564899 .. 1564912 -  -6.7  -4.05714   AGTTTTAAGGACAAA               TTCGC TTAC GCGAA                AGAAACGTAACCCCT  70 68
CYD39_RS07535 1564669 .. 1564690 - -13.1  -5.38054   TCCTATAAACAAAAA           CACCATTGC AGAT GCAATGGTG            TTTAACGTCATTTCA 100 52
CYD39_RS07530 1562813 .. 1562838 - -11.1  -2.82317   TAAAGAAGAAAGTGA         TATCCGGCGGC ATTC ACCGCCGGGTA          CGTATTAAATGGAAG  74 30
        adhP 1561484 .. 1561503 -  -9.3  -4.07877   CGATCTGATAAATAA            GGCGCTA TCCTCG TAGCGCC             TTGTTTTCATCTGCT  80 73
        yddG 1555308 .. 1555324 -  -6.7  -2.80252   AGTTTCATAAGATTA              CAAATTA TTT TAATTTG              TGTGATCGAGATCTC  55 408
        ompD 1554056 .. 1554076 - -13.3  -5.13344   ACATCAAGAGAAAAA            GCCAGCCCT GAA AGGACTGGC            TTTGTATTCAGACTA 100 49
CYD39_RS07495 1553216 .. 1553232 -  -9.3  -4.82901   GCGCCGGCAGAAAAA              GCGGCGG CGG CCGGCGC              GATAGAAACGATGGC  93 369
CYD39_RS07485 1551205 .. 1551219 -  -7.1  -3.42405   CACAAAAAAGAGACA               GAGCG TCACG CGCTC               TTTTGAGAACTTATT  65 174
CYD39_RS07480 1549729 .. 1549742 -  -2.4  -3.53444   CGATTTGGCGTTAAA               CCAT TGCCGG ATGG                CCGTCCTACAGGTGC  47 49
CYD39_RS07475 NONE
        narH NONE
        narW NONE
        narI 1542948 .. 1542979 - -12.2  -2.89421   TGAAGAATCATCATA      GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC       GTTTTTCTTTGCCCG  80 67
CYD39_RS07455 1541571 .. 1541582 -  -7.2  -3.73968   AAATTGCTCAGCAAA                CGCC GCAT GGCG                 AATACCGCCTGATGC  65 465
        ansP 1538184 .. 1538207 - -14.6  -3.74747   GCAACGCGCATTAAA          CCCGGCAGGCC TGG GGC-TGCCGGG          GAAGGGGAATGTTAT 100 37
CYD39_RS07425 1534290 .. 1534308 - -14.6   -3.1505   ACTATGGCTTATCAA             TAGCGGGG GTT CCCCGCTA             TTGCCGGATATTTGC  95 48
CYD39_RS07410 NONE
CYD39_RS07405 1530763 .. 1530777 -  -4.2  -3.79113   ATCGGGCGACAATAA               CGCGTA TAA TAGGCG               AATCATGCTGTTACA  55 300
CYD39_RS07395 NONE
CYD39_RS07390 NONE
CYD39_RS07385 1523879 .. 1523891 -  -3.3  -5.27335   TGTGTCAAATAAAAA                GAGCA TAT TGCGC                GCGTTTTTTCCTCTG  77 278
        yncL 1523564 .. 1523607 - -15.2  -4.15235   AATCGTGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG 100 50
        sifB NONE
CYD39_RS07340 1516667 .. 1516681 -  -2.8  -4.58663   ACCACCTCTTAAAAA               TGCC CCAGCCC GGCA               GCGTTGTCGCTTCAG  67 91
CYD39_RS07325 1512419 .. 1512430 -  -5.8  -3.51232   CCGTCCCCAAACCAA                CGAC CCAG GTCG                 GGCAGCAAGTTCTTG  57 492
CYD39_RS07305 1508908 .. 1508921 -  -6.7   -3.2964   AAAGCGTGGCTACAA               CAGTC GCTC GACTG                GCCGCAATATGTCAC  56 440
CYD39_RS07295 NONE
CYD39_RS07290 NONE
CYD39_RS07285 NONE
        sgcQ 1504950 .. 1504960 -  -4.6  -3.57144   CGGGTTACTCTGAAA                 CCGA TCC CCGG                 CGTGTCTTTTGGCGA  55 108
CYD39_RS07275 NONE
CYD39_RS07270 NONE
CYD39_RS07265 NONE
     aac(6') 1502454 .. 1502477 -  -6.6  -3.45634   ACCGTAAGCAATGAA          GGCCCGGC TTGCATCT GCCGGGTC           TTATTCCCGACGTCC  62 134
CYD39_RS07250 NONE
CYD39_RS07245 NONE
CYD39_RS07240 1497557 .. 1497572 - -11.8  -4.44667   TCTTTTAAGAACAAA              GCGCCC GGCC GGGCGC               TTTTCACCGTTAATC 100 35
CYD39_RS07235 1496703 .. 1496718 -  -6.2  -3.75169   GACTATGTCACTAAA              TAGTTG ATGG CAACTA               TTTCGGATTCAGATA  64 79
CYD39_RS07210 1489642 .. 1489675 -  -2.3  -4.67982   GGTTACGCAACAAAA    CG-CGTCGCTGGTCG AAGAGG CGTCC-GCGGCGGCG     GCTTCGCTTGAAGAA  65 182
        steB 1485480 .. 1485491 -    -3  -3.73775   GGCACTCTTATGAAA                TTAC TCTG GTAA                 AAGTCAGGCTTTAAT  52 162
        sseJ 1482811 .. 1482835 -  -4.1  -4.52857   ACGGTGTAGATAAAA          CGGCGGCACGT AAA ACCTGGCGCAG          AGTGCCGGAATCCAC  66 333
CYD39_RS07170 1480990 .. 1481019 -  -4.3  -2.67143   ATAGCCAGCATATTA       CCTGATGACATAG CTTA CTATTTCATCCAG        TTATCGACGATGCCA  46 13
CYD39_RS07165 NONE
CYD39_RS07160 1479589 .. 1479608 -  -2.8  -2.79106   AAAGAAGAGAGACCA            GC-CAGCGA TCA TCGTTGTGC            CTCGCTAAAAAAACA  41 14
CYD39_RS07155 1478840 .. 1478855 -  -6.2  -3.55973   TAACGCAATAATGAA              GGTTAA AATC TTAACC               AACACTAAATAAAAA  60 90
CYD39_RS07150 1476807 .. 1476823 -    -3   -4.4078   GCGCTGGAATTAAAA              CAACGA AGCAA TCGTTA              GGCAAGCATTAATCA  60 435
CYD39_RS07145 1475928 .. 1475961 -  -6.7  -4.61199   ATTCCATACAGAAAA     CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG      AAGGAGGACGGGTCT  79 171
CYD39_RS07125 1469588 .. 1469607 - -13.6  -2.67316   GAACCTAAGAAGTCA            CCTCCCGT CGAA ACGGGAGG             CAAAAATATTTAAGC  86 35
        ldhA 1464611 .. 1464634 - -12.4  -4.13767   GGGGTTATCCGAAAA          TGCTCCCCTG AGCG CAGGGGAGCG           ACAGGATTAGAACAG 100 32
        hslJ 1463916 .. 1463933 -  -6.9   -2.8552   CGCCAGGGATGAAAG             CGGCGAT GTCC AGCGCCG              GCGAAGCGAATTGCG  56 212
CYD39_RS07085 NONE
        nifJ 1459955 .. 1459974 - -13.6  -3.50047   CGTATAAATTGACAA            GCCCGAAC GAAT GTTCGGGC             TTTTTTTGTTTCCAG 100 61
        uspF 1458665 .. 1458675 -  -3.2  -2.55896   CGTATTAATTAAGAT                 GTCA CCA CGAC                 CAGAAAAATATCGGA  40 444
        ttcA 1453360 .. 1453388 - -14.6  -2.66008   AAATGATCGATAGCA        TGGCGTCTCAGC GGAGT GCTGAGACGCCT        GCAGATTATTTCACT  89 31
CYD39_RS07020 1447439 .. 1447451 -  -4.8  -3.36175   AAGTGTGACCGATAA                GGCA CTTTT TGCC                TGTATTTTCATAATA  54 33
         fnr 1446428 .. 1446444 -  -2.2  -3.91352   ATATGGTGAATGAAA              CAGAGG AAGCG CTTCTG              CCAGATCAATAAATG  53 92
        uspE 1445368 .. 1445403 -  -6.8  -2.85437   GAGTAACAGGAATGA    GGTATTGGCCGGATGGC AGC GCCATCCGG-CAGGACG    GAAGAGGGATTAATC  56 35
CYD39_RS07000 1443793 .. 1443827 - -14.5  -3.12668   CATCCGGACAGGGAA    GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC    TATCTTTTATTTTGT  89 32
CYD39_RS06990 NONE
CYD39_RS06985 1441991 .. 1442003 -  -4.7  -3.76837   CAGAGAACCGAATAA                CCGGC AAT GCAGG                GGCGCAGGCATCCTC  58 76
CYD39_RS06960 1436023 .. 1436035 -  -4.1  -3.92178   AGCATTTTAATTAAA                CGTTA TCT CAACG                AGATAAAAGGTTAGC  57 379
CYD39_RS06955 1434546 .. 1434572 -  -2.8  -2.82036   AGAGATTATTGAAAC         GCAGGGTAAGCC GGA GGTTGACACCGC         AACCGGAATGACGAA  41 342
        bdcA 1432571 .. 1432582 -    -3  -4.29432   TAAACCGTATGAAAA                TGAA ATGC TTCA                 AAGGATTGCCGATGC  62 372
CYD39_RS06925 1429675 .. 1429709 -   -12  -3.20991   GTTAACTCAAGGTAA     CCACGCCCGCCGCCTG ATG CTGGCAGAAGGCATGG     GGATTAAGCGAGCGC  83 56
        mpaA 1426877 .. 1426889 -  -6.2  -3.58343   CGCAGTAGTCTGAAA                GCCC TGACG GGGC                GCTACGATATGATCA  57 248
CYD39_RS06905 1425468 .. 1425491 - -13.2  -5.70829   AAGAGTAGAAAAAAA          GAAGGCCTCC GGAT AGAGGCCTTC           TTGTGACAAAAGAGC 100 84
        pspF NONE
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 1412639 .. 1412661 -  -6.3  -3.14051   GCAGTCGCATGAACA           CCCTCAG AGAATCGAA CTGAGGG           TATTTGTTTCGCTTA  57 38
CYD39_RS06820 NONE
CYD39_RS06815 NONE
        fabI 1408488 .. 1408504 -  -3.8  -3.49176   GAAAGGGATGAAAGA              TTGTTA GGTGA TAACAA              ATATCAGAACGCTAT  52 113
CYD39_RS06805 NONE
CYD39_RS06800 1405190 .. 1405216 - -14.5  -4.96427   GAAGAAGAAAAGAAA         CGGCCTTTGCC TTCTC AGCAAAGGCCG         TTGAGCGAGCTAAGC 100 45
        pdeR 1402946 .. 1402956 -  -2.4  -4.00465   GAGAAGGGAAAAATA                 GGGC TAT GCCT                 GTCTGCACAGGCTGT  53 61
CYD39_RS06790 1402650 .. 1402677 -  -6.8  -2.94622   ACAGACAGTCAGAGA        GCCGGGAAGGGC TAAC GGCCATCCCGGA         CAAATAATCGCTATC  56 39
CYD39_RS06785 1401818 .. 1401839 -  -9.5  -2.72799   GTCTTAGAGAGAGGA           TGATTTGCC ATAG GGCAAACCA            TCGGGAAATATTTTA  69 38
        osmB 1401262 .. 1401287 - -11.9   -4.4078   GGCGGCTAATGAAAA         CGCCACGGT TGTAAATT ACCGTGGCG          TAAAAGTCAACTTTG  95 113
        ribA 1396370 .. 1396380 -  -8.2  -5.19212   ACCAGCAGGAAAAAA                 CGCC TCT GGCG                 GTGATTGCCGGGAAA 100 462
CYD39_RS06720 1388142 .. 1388178 -  -4.3  -3.93026   AAGATCTCAACGAAA    CGCACCATCTGTTCAAA GAG TTTGTGCAGCGGATGCG    TCCGGCTCTGGACAT  60 320
CYD39_RS06710 NONE
        cobO 1385503 .. 1385525 - -10.4  -3.53091   ATCCCGCTGCCGAAA           GGCCTGCCGC GCG GCGGCTGGAC           TGAGCTCGACCTCGC  74 299
        trpL 1382997 .. 1383015 - -10.2  -5.75342   TTTGTTCAAAAAAAA             GCCCGCTT AAC AGGCGGGC             CGGGTATCGTTTGGC 100 46
CYD39_RS06680 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 1376407 .. 1376429 - -12.7  -3.18912   CCAGCCACTCATTAA           GCCGCCAGC GTTAT GCTGACGGC           TTAACCCGTTATGCG  86 34
CYD39_RS06655 1375712 .. 1375733 - -12.3  -3.63744   CTCCTGGGCAAAATA           CTGCGAGCC AGAA GACTCGCAG            ATTGCTTGATAAAAG  95 68
CYD39_RS06650 NONE
CYD39_RS06645 NONE
CYD39_RS06640 1373648 .. 1373666 -   -16  -5.14563   GTTGTGACGAAAAAA             GACCCCGC CAG GCGGGGTC             AAAAAAGGACATGAC 100 64
CYD39_RS06630 NONE
CYD39_RS06625 1371441 .. 1371456 -    -6  -2.80016   TTCCATCATCAACGA              GCGTCG AATG CGCCGC               GTAACGGCGCATTGC  53 44
CYD39_RS06620 1370834 .. 1370862 -  -4.5   -4.6971   TAAAGGCGAAGAAAA        TATCGCCAGGC GTTCGCA GTCTGGCGATG        ATAAGTCACGGGAGG  71 42
        yciA 1369923 .. 1369934 -  -7.2   -3.6422   CACCGTTTGAAAATA                GCGC CCCG GCGC                 GGCCAACAAGCAGCA  65 408
CYD39_RS06605 1368974 .. 1368993 -   -15  -3.91897   TGTGTGAGCCAGAAA            GGGCACCG TATG CGGTGCCC             AACAGGCTATACTTT 100 41
         cls NONE
CYD39_RS06590 1366783 .. 1366820 -  -4.6  -2.67171   TACCGGATTAAACAG   GCTTGCCGGAGGGCGC AATCAG ACGCCATCCGGCCTGA    ACCGCTTATTCGCGC  46 31
        adhE 1355653 .. 1355670 - -12.7  -6.09196   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 54
CYD39_RS06540 1353770 .. 1353786 - -13.7  -5.81412   CTCAGGCAAAAAAAA              TCCCGCC AGC GGCGGGA              TTTTAAGCATCCAGG 100 48
CYD39_RS06520 NONE
        purU 1348822 .. 1348851 -   -10  -3.06261   GGGTAATGCTTAATA       CTGGCCCGCTTCC TTTTG GGAAGCGGGGC-G       CATCATATCAAATGA  73 136
CYD39_RS06510 NONE
CYD39_RS06505 1348486 .. 1348499 -  -6.7  -2.57132   CCCTTCCCCGACAAG               TGCAG ACTT CTGCA                TTGCTCATCGAGTTA  55 63
CYD39_RS06500 NONE
CYD39_RS06495 NONE
CYD39_RS06490 NONE
CYD39_RS06485 NONE
CYD39_RS06480 1347218 .. 1347241 -  -3.8  -3.80437   AAAAGCAGCAAAACA          GGATTTTGCG AAAG CGCAATATCA           GCTTGGCGTAGCATA  56 492
        narX NONE
        narL 1334150 .. 1334161 -  -3.6  -4.56597   CGTGCCGCTCAAAAA                GCAG CTTG CCGC                 CAGTGAAGTGGCGCA  69 474
CYD39_RS06430 1332215 .. 1332225 -  -5.4  -4.28361   TCAAGGTTACTAAAA                 CAAG CAT CTTG                 TTTTAACAGTGTTTA  67 455
        chaA 1330847 .. 1330867 -  -7.5  -3.53012   CTGCCGCTGGCGAAA            CTGGAGCAG TTC CTGACCCAG            ATAAAAGCGATTGAT  62 136
        lolB NONE
        ispE 1323687 .. 1323701 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAGCTCAGCTTGCC  78 160
CYD39_RS06375 1322591 .. 1322604 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TTTCAGATCCGGGTT 100 44
        dauA 1320733 .. 1320748 -  -3.2  -3.99324   CGTCACTATGACAAA              CGTTGC CGCC GTAACG               ACAATCGTCGTCATA  55 90
CYD39_RS06360 1319598 .. 1319625 -  -9.8  -2.94099   TTCGCCTATTATACA        CGGCGTGCGGCA AAAA TGCCGCACATCA         CTGGTTATTGCGCCT  70 30
        ychF 1318342 .. 1318359 - -11.3  -5.45802   TTGTGAAAAGAAAAA             TCCACGC AAGT GCGTGGA              TTTTATGGGGTTTTC 100 88
CYD39_RS06350 NONE
CYD39_RS06345 1316447 .. 1316459 -  -5.5  -3.53012   CTGTCCGTGTCCAAA                CTGGC TGC GCCAA                TAACGCCTGGTGGGA  57 124
CYD39_RS06335 NONE
        hyaB NONE
        hyaC NONE
CYD39_RS06320 NONE
        hyaE NONE
CYD39_RS06310 1308790 .. 1308807 -  -6.3  -2.86773   GTAAAAAGCTAATCA             GTA-CCGG ACA CCGGTTAC             GTTCCTGTTGAGAGC  55 42
        appC NONE
CYD39_RS06300 NONE
        cbdX 1305917 .. 1305948 -  -6.5  -5.36364   GTAAAAAGATAAAAA      TAACCGGAGTCAG ACGGCG CTGGCCCCGGTTT       ACCTCTTTATTGTTG  91 32
CYD39_RS06290 1304245 .. 1304262 -  -7.7   -5.4492   GATACAGACAAAAAA             TCCACGC CGGG ACGTGGA              TTTTAGCGCAATAAC  95 49
CYD39_RS06285 1302310 .. 1302349 -  -2.2  -3.05522   TAACCGCTGCAAAAC GTGTAAGCGTTGACCCGG TCAGCG CCGGGTCAAC-C-TACTA  TAAACACGCGTTACT  42 36
        ycgR 1300650 .. 1300660 -  -8.2  -4.68593   CCCATCAGTGAAAAA                 GCCG GGG CGGC                 ATGGGGGGTTGATCC  90 505
        ldcA NONE
CYD39_RS06260 1297533 .. 1297553 -  -2.5  -3.28712   TGCCGTTTGTGACAA            CGTAACCTA ATT CAGGCTAAG            GCGTCGACCGGTCCA  46 72
CYD39_RS06245 1293041 .. 1293053 -  -4.8  -3.76492   CTGAACGGCATGAAA                GGGT TATAC ACCC                GCATTGGTCGCCACT  55 272
        nhaB 1290737 .. 1290767 -  -2.5  -4.68994   ATTATCAGGCAAAAA      TCGGAGCCGGGC GGTGTATT GCCCGGC-CAAA       CGTTACGAAAGCGTT  65 28
        dsbB 1290076 .. 1290091 - -10.4  -5.75342   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC 100 32
CYD39_RS06225 1289232 .. 1289260 - -12.4  -3.39895   TGTGCTATTAACCAA        CCGCCTGATGCA CCGTC TGCGCCAGGCGG        TTTTTTACATCTTCT  90 413
        minC 1286352 .. 1286364 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CTGTCAAAGCGTTGT  54 9
        minD NONE
        minE 1285187 .. 1285216 - -10.9  -5.57054   AATAATGTAAAAAAA       TAAAAAAGGCAGA TTCT TCTGCCTTTTTAA        TCCAGGAATTTTCCC 100 51
CYD39_RS06155 1278091 .. 1278103 -  -2.6  -3.73647   CTCAGTCATGAACAA                CAGC AAAAA GCCG                TAGAACGTATCCAGG  50 162
        pabB NONE
CYD39_RS06140 1275836 .. 1275849 -  -2.3  -3.19026   TAGTGTAAGAGGGAA               CGCTG GCAT CAGCT                TAACTATTCACATGA  44 204
        sdaA 1274355 .. 1274383 - -13.9  -5.10968   AGGAAGAGATAAAAA        TTTCGCCCATCCG TAG CAGATGGGCGAAG        GGAGGGGAAACGGCG 100 42
CYD39_RS06130 1272213 .. 1272229 -  -3.7  -2.71791   AGTGGTGCCGGAAAC              GCTTGAT CCT ATCAATC              TGTTAGGCGTTTTGC  43 457
        manX NONE
CYD39_RS06115 NONE
CYD39_RS06110 1267888 .. 1267905 - -14.1  -6.04953   AGAGAAATAAAAAAA             CGGGGCC GTTT GGCCCCG              GTAGTGTACAACAGC 100 42
CYD39_RS06105 1267339 .. 1267354 -  -6.2  -4.66537   TTGGCCAATAGAAAA              TATAGC CTTA GCTATA               TTATGATTCGAAATA  78 76
        mntP 1266364 .. 1266374 -  -6.8  -3.62522   GAAGTGTGGGAACAA                 CTGG CCG CCAG                 CGCCGGACTTAGCTG  62 80
CYD39_RS06065 1261499 .. 1261521 -  -9.2  -5.78622   TGACGTTAAAAAAAA           GCAGCTAC GAAAAAT GTAGCTGC           TTTTTTTATAACATC 100 184
CYD39_RS06055 1259105 .. 1259122 - -12.7   -4.3534   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 31
CYD39_RS06030 NONE
CYD39_RS06025 1250610 .. 1250635 - -12.5  -4.46926   CAGTGTAGCATAAAA         CGCTCCGGCGC GAGT ACGCCGGAGCC          GGGTGTTTAACGTGG 100 32
        rsmF NONE
CYD39_RS06015 1248744 .. 1248759 -  -8.2  -4.34486   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  79 37
CYD39_RS06010 1248450 .. 1248460 -  -2.4  -3.31905   AGCGCGGATACAATA                 GCGG TAT CAGC                 GACCAGGGTTAAAAA  45 34
CYD39_RS05990 1245818 .. 1245831 -  -3.1  -4.19258   AGATGTTACCTAAAA               GCAAT AATA ATCGC                CCGGTATCATATAGT  60 322
CYD39_RS05985 1245341 .. 1245353 -  -3.3  -3.53012   CCCTGGCTTGTTAAA                GCGGC ATG ACCAC                ATTTTCTATATATAA  50 8
CYD39_RS05980 1244497 .. 1244516 -  -2.1  -2.83899   AATTTTGTACTAAAT            CTCTGTG GTATGG CACAGAC             GTTTAGAAGACAGGT  41 40
CYD39_RS05975 1244146 .. 1244157 -  -2.2  -4.09628   TATGTGAAATAACAA                CCTC ATCT GAAG                 GCGAATAATTAACCA  55 95
CYD39_RS05970 1243037 .. 1243057 -  -6.8  -2.87136   CCAGTAACCACTACA            GAGCGTCA GGGGT TGGCGCTC            TTTGCCAAATGTTTG  56 50
CYD39_RS05955 NONE
CYD39_RS05950 1241475 .. 1241500 - -13.3  -3.09327   TCAGGCGAGGTAATA         CGCCGCCAGAA AATG TCCTGGCGGCA          ATCTTTTTCTGCAGA  86 103
CYD39_RS05930 NONE
CYD39_RS05925 1239078 .. 1239095 -  -2.6  -4.13767   GGTCGCATTTCAAAA             CTGCAG GAACAT CTGCTG              AATACTGTATACTCC  56 2
CYD39_RS05900 1234843 .. 1234870 -  -7.8  -5.45652   ATTTTTAATAAAAAA        CCGTAAACCTTC ACGA AAAGACTTACGG         TTTTTTTATCTCTGA  95 362
CYD39_RS05880 NONE
CYD39_RS05875 NONE
        exoX 1231173 .. 1231186 -  -2.3  -4.66609   TACGCGAGCTAAAAA               CGGAC CAAC GTCTG                CTGCTGTTATGTACG  65 189
        purT 1226247 .. 1226284 -  -6.4  -4.83615   CAGGTCTGATAAAAA  TGCGCTAACGTCGCCATC AAGC GATGGCG-CATTAGC-CT   TTTACCGTCACGCGG  80 19
CYD39_RS05825 1220665 .. 1220677 -  -3.4  -4.25104   CTCCGTTGACTAAAA                CAAC TTGGT GTTG                CGTGAACATTGATCC  60 115
CYD39_RS05820 1219130 .. 1219155 - -14.9  -4.49958   ATCCCATCAAATAAA         TAAAGCCTCTC GTAA GAGAGGCTTTA          TGCTGACAAACCCTG 100 71
        znuC NONE
        znuB 1213769 .. 1213801 -  -5.6  -2.73364   CGCCGAGGTGAAGCA     TGACGGGGCTATTTC AGCG GAAATTGCCGCG-CA      GGCGCTGGATATGCT  47 369
CYD39_RS05780 1211082 .. 1211098 -  -8.1  -3.17075   GGCGGCTTAATTCAA              TTAATGC TGT GCATTAA              ACTGTGATGGTAATC  64 47
CYD39_RS05775 1209848 .. 1209865 -  -2.7  -3.67141   AGAACGCGATGCAAA             TGAG-CGA GAG CCGACTCA             ATCTGGCGCGGGGAA  51 53
CYD39_RS05750 NONE
CYD39_RS05745 NONE
CYD39_RS05740 1204076 .. 1204092 -  -3.6  -4.85782   TCCGGGAAAAATAAA              GGCGCA TATTG TGCGCT              AATACAGGGAGAAAA  69 24
        cmoA NONE
        cmoB NONE
        argS 1198746 .. 1198774 - -14.6  -5.07486   CAGTGGCAATAAAAA        GGCCTGAGTCCG TTACC CGGAGTCAGGCC        TGATGATGTTAACGA 100 49
        mrdA 1196534 .. 1196549 -  -6.8  -2.56838   GATAGTGAAACATAT              CTCGCC GGAA GGCGAA               CTGCTGCAAACATCA  51 214
CYD39_RS05630 NONE
        uspC 1179492 .. 1179523 -  -5.1  -3.16564   GCGTGACGGGATGAA      CCTG-GTGGCGAAA GAGTT TGTCGCCGCGCAGG      ACCCCGCTAATCCTG  52 342
CYD39_RS05600 1174957 .. 1174977 -    -4  -4.58395   TTCATCTTTGAAAAA            GCGTTTAC CGGGC GTAAAGGC            GAGGGGTATCCGCCT  69 426
CYD39_RS05590 1173893 .. 1173912 - -12.2  -4.35747   TAAAAATAAAGGAAA            GCCAGCAT CTTC ATGCTGGC             AATAGCGACCCTGCA  95 83
        ftnA 1173038 .. 1173053 -    -6  -4.63932   GAGGCGGCAATAAAA              GCGCGC TTTG GCGAGC               GGGCACGATTTCACA  75 205
        tyrP 1171269 .. 1171295 -  -2.9  -4.37658   AAGCGTTCGATAAAA        GCGTTGACGCTA TCCG TAGCG-CGGCGC         TTGAGCTGCATGCCT  62 240
CYD39_RS05520 NONE
CYD39_RS05515 1163493 .. 1163519 - -12.2  -3.63627   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC  89 33
        fliD NONE
        fliS NONE
        fliT 1152147 .. 1152160 -  -3.8  -3.28712   TTCCGTGCTCCAGAA               GTCG TTTAGC CGAC                CTCTGGAGTATGGAA  50 67
        amyA 1150581 .. 1150594 -  -5.9  -5.24129   CCGCGTTAGAAAAAA               CGCCG CTGC CGACG                CCGCTGCCGTAATTT  83 77
        yedE NONE
        yedF 1148539 .. 1148565 -   -13  -2.60508   TATGCCGTAAAAAGG         TCTCCCGCCGTA ACG TACAGCGGGAGT         ATGCGCTTATTTTTG  84 32
CYD39_RS05425 1147634 .. 1147645 -  -2.2   -4.1399   TTAGCGACAGACAAA                CGGCG GCG CGC-G                TTCAGGCGGAAAAAT  56 300
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 1140806 .. 1140820 -  -2.8  -3.96148   CCTGTCCACGACAAA               GCGT GGAAAAG ACGC               GGATAATCATGCTAC  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 1138471 .. 1138494 -  -2.2  -2.56982   AAGGAATAACAAACG          GCGCATCAGG ATCT CCCGGAACGC           TTGAGTAAGCTCTTC  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA 1135550 .. 1135572 - -12.6  -4.14392   GGGTAACCGTTAAAA           CGGACGGCGG TCC CCGCCGACCA           GGCGTGGTACTGGCA  95 205
        yodD 1134968 .. 1134979 -  -2.2  -2.80816   CTTCCAGGCAGCACA                TGCG TTGT CACA                 CTTTTGCTACCGAAC  40 209
CYD39_RS05335 1133671 .. 1133684 -  -2.3  -4.16279   TAGATTATTTTAAAA               GCGTT AACG ATCGC                TTTGGTCATCAGGCA  56 379
        yedA 1129861 .. 1129897 - -12.4  -3.02144   GGAGCGCCTGGAAGA   GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC   ACCCAGGGGATTCAT  76 41
CYD39_RS05290 1124981 .. 1125005 - -17.9  -3.78934   CTTGCCCTATAATAA          CAAGCCCGCGC TAA GCACGGGCTTG          AATAACATAAAGCGT 100 42
CYD39_RS05265 1122044 .. 1122061 -  -6.9  -4.77986   CCAAAGACTTAAAAA             GCGGAGC GACA GCTCCTC              TGGATTTATGTCAGC  80 77
        tssB NONE
CYD39_RS05230 1111084 .. 1111104 -  -2.5  -2.71364   GTATTTCTGGAACCA            GGTTTCACT GTC AGTGGAACA            CCTTTCGCCAGTGTG  41 15
        tssC 1109543 .. 1109576 -  -7.4  -3.37487   CCAGACGCTCAAACA     GCGAT-CCGGCAGGC CTTTC GCGCGCCGGTATCAC     TTATCTAACCGTCCG  63 22
        tssE NONE
        tssF NONE
        tssG NONE
        tagH 1104889 .. 1104916 -  -9.1  -3.38291   TTCACAACCGCATAA        GGCGAGGGTGA ACAACG CCACCATCGCC         CAGGCGAGGAAACCA  71 48
        tssJ NONE
        tssK NONE
CYD39_RS05190 NONE
        tssH NONE
        tagO NONE
        tssA 1097329 .. 1097343 -  -4.2  -3.74347   GGCAGAAACCTTAAA               CCGG GGCATTG CCGG               TCTGAGTGCCGATCT  55 98
        tssM NONE
CYD39_RS05165 NONE
CYD39_RS05160 NONE
CYD39_RS05155 1090637 .. 1090648 -    -3  -3.89448   TGGAAAAATATATAA                GTAA AAAA TTAC                 GTTACTATTTCATGT  54 517
CYD39_RS05140 NONE
CYD39_RS05135 1088253 .. 1088267 -  -3.5   -3.3941   ATCATACGGAACTAA               TGGCA TGTTG CGCCA               CCTTTAACATAGTTT  48 7
CYD39_RS05130 NONE
CYD39_RS05125 NONE
CYD39_RS05120 NONE
CYD39_RS05115 1086061 .. 1086080 -   -10  -5.00412   AAATATAAGCAAAAA            GCCCGTAC TTCT GTACGAGC             TCTTTCTTGAATATG  93 219
CYD39_RS05110 1084703 .. 1084728 -  -8.9   -3.3197   AGATTATGTTGATAA         TCCCTGCTGGG GGTT CCCTGCAGGTA          TGCAATTGACTAGTC  71 35
        putA 1076073 .. 1076090 -  -9.1   -4.7373   TGACGCGAGTAAAAA             GGCTCCA TTGA CGGAGCC              TTAATTAACCACAGT  90 42
CYD39_RS05085 1075441 .. 1075458 -  -3.4  -4.84527   TTGATAGATGAAAAA             TCCGCGC TGATT GC-CGGA             TGGGTGCACAGCGGG  74 220
        wrbA NONE
CYD39_RS05065 1073449 .. 1073487 -  -8.1  -4.09511   AACACTGCTGCAAAA  TAGC-CATATGCCCCCGC GCAG GCGGGGGCGTTTGTGTTA   TACGTTTTTACGTTC  74 23
        cbpA NONE
        cbpM 1067155 .. 1067182 - -14.9  -2.78679   CGGGTGCATGTAAAT        CCG-GGGTGGGC AGAAA GCCCACCCTCGG        TTTATTGCCTTTATC  89 46
        iraM 1065803 .. 1065825 - -17.8  -2.64803   GCAGGGGTAAACCCA           CGGGCTGACA TGA TGTCAGCCCG           TTATGCTTTTGGCGA 100 387
        hpaR NONE
        hpaB NONE
CYD39_RS04965 1053597 .. 1053629 -   -12  -2.50443   TTAGATTGTATTAAT      CGCCGCGATTTATG GCGAG CAAACATCGCGGCG      GGAATAAAAATCTTC  79 100
        hprR NONE
CYD39_RS04950 1050744 .. 1050757 -  -6.7  -3.35798   AGGTTGTATTGATAA               CCACA GCCC TGTGG                CAGGGAAGGGGAACA  61 56
CYD39_RS04945 NONE
CYD39_RS04940 1048469 .. 1048481 -  -7.7  -3.15503   TGGGAACATTCAACA                GGGTT AAC AACCC                TTTAAAAGGATGTGA  64 472
        sopB NONE
        sigE 1046212 .. 1046224 -  -7.7  -4.59109   TAGATGGCGTAAAAA                CCTGA TGA TCAGG                AATACTTACACACTA  82 182
CYD39_RS04920 1045666 .. 1045698 - -11.4  -5.02074   TGATGTTGTAAAAAA      TCAGGCTGACGT TAATAAAAC ACGCCAGCCTGA      AGTCATATTCAGTTC 100 116
        pipB 1044331 .. 1044347 -  -3.1  -3.31188   GACTACAATTATGAA              TTATTTA AAT TAAACAA              TAATAGTTTTTTTAG  48 201
        pipA 1043494 .. 1043515 - -10.1  -4.04806   CGCCAGATTAAACAA           GGGGTTACC GAAA GGTAGCCCC            TTTGTTTTTTGGGCG  82 130
        yccA 1042305 .. 1042322 - -12.7   -5.0917   GTAGCAAAAAATAAA             GCCCTGC ATAA GCAGGGC              TGGAAGAGGGGAATG 100 45
        tusE 1041837 .. 1041853 -  -7.9  -3.55801   ATCAAGTGGCTGAAA              GAGGGCG GGC CGCGCTC              TGCTCGTGTGGACAA  62 98
        rlmI NONE
        hspQ 1038411 .. 1038432 - -10.1   -2.8704   AATAAAAGTTTAAAT           GGCCGGATA TCGC TCTCCGGCC            TTTTACATACAATCA  72 38
CYD39_RS04860 1037157 .. 1037176 -  -7.8  -3.21288   CAACTCATATCAAGA            GGGCGG CTGTTTTT CCGCCC             ATTGCAGAAAATGAT  64 0
        mgsA 1036565 .. 1036591 - -15.8  -2.76737   GAGGAAGCCCTAAAG         CGCGGGCGGTAC AGC ATCCCGCCCGCG         TAGCGGTTATTTCAG 100 32
CYD39_RS04845 NONE
        yccS 1031715 .. 1031750 - -14.1  -2.55351   TCGGCGTACATGAAG   CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG    ACTGGGCTCATTCGC  81 41
        sulA 1030346 .. 1030379 -  -5.4  -4.80882   ATCGTACAGCAAAAA     TTGCGGAAACCGCTT CTGAC AAGCGTTCT-CGCAA     AAAAAACGTTAGCAC  76 94
        ompA 1028999 .. 1029013 - -12.8  -5.23316   GACCAGAGCAAAAAA               CCCCGC GAC GCGGGG               TTTTTTATCAGACGG 100 45
CYD39_RS04815 1026558 .. 1026572 -  -5.7  -2.57931   TGTACGCTGGACAAG               TCCGA TCAGT TCGGA               ATAAAAGCGTTCAGC  50 16
        fabA 1025896 .. 1025920 - -18.7  -4.82901   GTCTCTTTAGAAAAA          GAAACCTCCGC ACT GCGGAGGTTTC          GCCTTTATTGGCTTT 100 81
CYD39_RS04775 1016418 .. 1016428 -  -2.4  -4.00348   TTCGAATTAACCAAA                 GAGC AAC GCGC                 GGAGTTGGTGTTGAA  54 341
        pncB 1010702 .. 1010728 - -12.3  -3.41745   TGGTCAGAAGAGTAA         CAAAGCGCCCA CTTTC CGGGCGCTTCG         CACAGGCATGGTTAA  90 37
CYD39_RS04735 1006928 .. 1006947 -  -5.7   -4.6526   AGAAACCTGTAAAAA            GTTCGCA CCTGCT CGCGAAC             CATTGAGAATTTAGG  74 65
        asnS 1005351 .. 1005367 - -13.7  -5.44119   TTCAGGCGAAAAAAA              GGCCAGC ATA GCTGGCC              TTGAGTGTGACGTAA 100 44
        ompF 1003641 .. 1003656 -    -9  -5.77988   AGAGAGATAAAAAAA              CAGGAC CGAA GTCCTG               TTTTTGAGGCATAAA 100 58
CYD39_RS04720 1002259 .. 1002289 - -14.2  -3.50853   GTCTGGTAAGCAGAA       TGAAAAAGCCTGCA ATG TGCAGGCTTTTTTA       TCGGTCACGCCAGTC 100 50
        elyC  990146 ..  990170 -    -7  -3.36991   CAGTATGCTTAAAGA          CGCCCGTAGC GATCA GCTTCTGGCG          ATGGTCGGCCCCGGG  58 251
CYD39_RS04605  972530 ..  972550 - -10.4  -5.26247   TGAAAATAAATAAAA           CGGGGCCGC AAAG GCG-CCCCG            TAATATAACGCAGCC 100 77
        focA  971285 ..  971302 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  42 63
        pflB  968936 ..  968955 -  -7.8   -5.2197   TATAAAAATTAAAAA            GGCCCCAC TGAC ATGGAGCC             TTTTTTTGTACGCTT  91 68
CYD39_RS04585 NONE
        pflA  966534 ..  966555 - -11.6  -4.39568   ATCCAGACAGCAAAA           CGGCTACC GTCATG GGTAGCCG            TTTAAAAGCGGGTAA  93 53
        trxB  949041 ..  949057 - -12.3  -4.89063   CGACGCAAAAATAAA              GGCGACT TAT AGTCGCC              TTTTTTACTTTTGTT 100 56
        cydD NONE
        cydC NONE
CYD39_RS04510 NONE
CYD39_RS04505 NONE
        infA  944154 ..  944170 - -10.1  -5.10497   AATGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  93 62
CYD39_RS04490 NONE
CYD39_RS04485  941509 ..  941532 - -13.2  -3.69364   ATGCAATAGACATAA          TCCCCGC-CCA AAC TGGCGCGGGGA          GGCAAATTAGCGCTG 100 32
CYD39_RS04480  940895 ..  940914 -   -10   -4.9755   ACATATAAGCAAAAA            GCCCGTAC TTCT GTACAGGC             TCTCAGCTTAAATAT  93 414
CYD39_RS04470  940062 ..  940072 -  -5.4  -3.27704   ATTTTCGAAAGCGAA                 TGCT ATT AGCA                 TCACACTTTCTACGT  56 74
CYD39_RS04465  939699 ..  939736 -  -5.5  -4.59773   CTGTACGGTGAAAAA   GCTGCTCCA-CTTCAGGA TTA TCCCGATGCTGGAGCTGA   TGCTGTCCTTACCAA  74 51
CYD39_RS04450  937538 ..  937555 -  -9.8  -3.86346   TCACTGCCGTACAAA             CCGGGC CTTAGC GCCCGG              TTTTTTTATGCCGGC  81 481
        cspD  934285 ..  934305 - -12.6  -5.27335   GGCGTTAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 62
CYD39_RS04415  929783 ..  929797 -  -4.2  -3.95324   GATCGGGAAGAAGAA               CGCGAA CAT CTCACG               GCGCTGCCTGCGCTG  60 283
CYD39_RS04405 NONE
         hcp NONE
CYD39_RS04395  924474 ..  924485 -  -7.2   -2.7464   AAGCGAGTGGTAAAT                CGCC CGGT GGCG                 CTAACGCTTACCGGG  58 63
        poxB NONE
        ltaE NONE
CYD39_RS04380 NONE
CYD39_RS04375  918592 ..  918604 -  -4.8  -4.11692   CATTGAGCTGGAAAA                TCGC GGTTG GCGA                ATGTCCGGCGGGGTG  62 475
CYD39_RS04360  917192 ..  917222 -  -7.7  -3.97709   AGTAGGTAAGAAGAA      TTGTC-GGCATCCC GGGC AGAATGCCAGACAA       TTTACGGGGTTATGG  72 67
        artP NONE
CYD39_RS04350 NONE
        artQ NONE
        artM  914047 ..  914073 - -15.3  -5.68039   AAATGGATAAAAAAA         GACGGACAAGT TAACC ACTTGTCCGTC         GGGTTTATTCAAAAT 100 118
CYD39_RS04335  912931 ..  912951 -  -3.9  -4.93877   TTTGATGAAAGAAAA            TGATGCTCC GGC GGAGCAGTA            TCGCCGTCTGGGTCT  75 272
        grxA  900288 ..  900324 -  -7.1  -5.41143   CACCGGCGAAAAAAA    CGCCGATAGCGCCCTCC GGT AGAGGGCGTTGCCAGAG    CAATCAGGCGAAAAG  95 29
CYD39_RS04255  897725 ..  897735 -  -8.2  -3.09933   TTGTAACGGATCGAA                 CGCC GCT GGCG                 CGTGAAGCGATTTTA  60 253
CYD39_RS04240 NONE
CYD39_RS04235  894858 ..  894871 -  -4.5  -3.48105   TGAAGTCAGTAAACA               CGCCT GGTT AAGCG                GCGGCAATGGGCTAT  52 189
        ybjG  892777 ..  892805 - -14.7  -3.70902   CCCTGGAGAGTTAAA        TAAGCGCTCCGCA CCA TACAGAGCGCTTA        ATATTACTCTTTTTT 100 48
        deoR  891959 ..  891995 - -18.7  -4.17048   GTTCTCGTAAAATAA    CCCCATTGCCGGGTGCG CGT CGCATCCGGCAACGGGC    GGTTAATACATCAGA 100 28
CYD39_RS04210  889459 ..  889469 -  -4.6  -3.14564   CTATGGCTGCATGAA                 CACG GTC CGCG                 CGGCGGCGATGAAAT  47 437
        rimO  886678 ..  886693 -  -8.2  -2.50074   GGCGGGATAACACAT              CCGGCA CCCG CGCCGG               GGGAGGTGGCGTTAA  59 37
        moeA NONE
        moeB  878093 ..  878111 -  -8.8  -2.87564   TTATCTGTTGATACA             GCACGGCC ATA AACCGTGC             TTCGGTATGTTTATT  65 51
CYD39_RS04155 NONE
CYD39_RS04150  874449 ..  874466 - -11.3  -3.14211   ATCCCTTCTGATTAA             CAGGCCT GCGT AGGCCTG              TTAAACGTAGCGCCA  81 81
CYD39_RS04140  871988 ..  872010 -  -5.5  -3.85909   GGATCGAAAGCTAAA          CACTGACGCC CGGT GGCG-CTGTG           CTTACCGGGCCTACG  61 123
        ldtB  867247 ..  867267 - -15.5  -4.19177   ATGCCGTAAGAGAAA            GCCCGATAG TAT CTATCGGGC            TTCGCAGGCAGAGTC 100 43
        mntS  865281 ..  865307 -    -8  -5.77632   AAAACCACAAAAAAA         CAGGGGAAATGG GCG CCATTTCCGTTG         AGGATGCAAAATAAA 100 62
CYD39_RS04100  863459 ..  863476 -  -8.4   -5.0925   GGTGAAAATGAAAAA             TCCGCC TTTCGG GGCGGA              TTTTTTTTGCCTGAA  91 48
        rhtA  861555 ..  861581 -  -6.8  -3.61398   TTTGGTGGGTAATAA         TTCTCATTTT AATGTAA AAAATGAGAA         AAAATATGACAAAAA  64 124
CYD39_RS04085  860719 ..  860737 -  -7.4  -4.19953   TATTTAAGTGCAAAA             CCCCTG TGCCAGG CAGGGG             TATAGGGATGACTTA  74 162
        glnH  859595 ..  859635 -  -9.9  -3.69216   CCGTCACGGAAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT  77 41
        glnP  858851 ..  858862 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCAAGACGAC  48 9
        glnQ NONE
        ybiO  855701 ..  855742 -  -5.7  -3.66166   TGGTGAAAAAAGAGA TGGCCCAGGGGCAAAAGCA AAGC CGCTTTATCGCCTGGACCT  TTATGGATGACGACC  60 69
CYD39_RS04055  854258 ..  854270 -  -4.9  -3.41693   TTGATTATTAATTAA                TTCAA CGG TTGAA                TTTACCGTTCTTGTC  54 147
CYD39_RS04050  853697 ..  853718 - -13.7   -5.8187   TAGCGAATAAAAAAA           GCCCGTCCA GTGG CGGACGGGC            AAATAAGGGTAACAA 100 154
CYD39_RS04035  849184 ..  849223 - -18.2  -3.68827   TACGGACTATGCAAA  TACGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACATA  ATTTTCATCCCACGG 100 8
CYD39_RS04025 NONE
        hlyD  845859 ..  845875 -  -3.6  -3.65046   CGTGCAGCGTAATAA              CGGCCT CACTC ATGCCG              TGCCTCGTCATTAAA  51 14
CYD39_RS04015 NONE
CYD39_RS04010  842937 ..  842962 -  -8.3   -3.9941   GGCCTGATAAGCAAA         GCGCATCAGGCA TAA TGCCGGATG-GC         GGCGTGAACGCCTTA  76 75
CYD39_RS04005  841415 ..  841427 -  -4.8  -4.46212   TGCTTCAGGAGAAAA                GCCA TGAAG TGGC                AACAACGCGTTCGTG  68 388
CYD39_RS03995 NONE
        clsB NONE
CYD39_RS03985  838289 ..  838315 -  -5.9   -4.4009   TTTTACCGGATAAAA        CGCGTTGT-GCT GGAA AGCGAAAACGCG         TCTGCTTAAATTTAT  70 37
        yvcK  831449 ..  831476 - -13.6  -2.90219   CAGAAGGGGGAGAGA        GCCTGTTTAC-CC TTC GGTGTAAACAGGC        TTCTGATAAGCGCAG  87 59
        bioA  820950 ..  820966 -  -2.2  -3.36803   GAAGTGTAGCCAGAA              GCAGCA TCGCT TACCGC              TGATTAATGGCTAAA  45 29
CYD39_RS03890  820022 ..  820044 -  -5.5  -4.33417   GCCAGCGAGAATAAA          GCGCTG-GCG CACC CGCACAGCGT           GGATAGCCTGCCGAC  69 417
CYD39_RS03860  812437 ..  812471 - -13.5  -4.25104   TCGCTTGCAGTAAAA     CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT     ATAAGCCTGAACCGG 100 49
CYD39_RS03850  809889 ..  809907 -  -3.8  -3.72695   ATTCTCTCGATGAAA             TTCTCCAC CTG GCGGATAA             AGTCATGGTGCTGGA  53 492
        modE NONE
        modF  805045 ..  805059 - -11.4  -3.29263   AGAGTGGTTCCAGAA               TGGCGC GCG GCGCCA               TTCTGATAATACATT  83 40
CYD39_RS03815  803952 ..  803966 - -12.8   -5.0538   TTTTATCCGAAAAAA               GGCGCG TTA CGCGCC               TGGGAATGAAACGGA 100 54
        galE NONE
        galT NONE
        galK NONE
        galM  799340 ..  799362 -  -7.7   -2.8001   ATAATTCTCATTATA           TTGCCGCGA GGTGT TGGCGGCAA           TGCTTACGCATAACC  60 179
        gpmA  798317 ..  798345 -  -3.8  -4.13767   GTCCTGATGCTAAAA       GACG-GCAGGCTGG TCG CCAGCG-GCGCGCC       GGAGACGGTGATTAC  60 220
CYD39_RS03750  789347 ..  789363 -  -3.7  -4.56597   TCTGGTTGCTAAAAA              TGAAGGA ATT TCTTTCA              TTTTGGACGCTGTCG  69 199
CYD39_RS03740 NONE
CYD39_RS03735  787057 ..  787092 - -15.6  -4.57353   GTGCAGGATAGAAAA    CATATCGGTCCGGTAA CAGC CTACCGGACCGATATT     GCCAATATTAATGTA 100 44
CYD39_RS03725  785219 ..  785236 - -11.3  -5.54907   CTGACAAAATAAAAA             GGAGAGC GAAA GCTCTCC              CGTTATCAGACTTTT 100 48
        zitB  784176 ..  784202 - -13.6  -3.51934   GCCTGTGGATAAACA         GCGCGCGGGAGC GAG GATCGCGCGCGC         TTTCCCGTTAATGGT 100 33
CYD39_RS03585  758546 ..  758575 - -12.1  -2.79535   AAAAGGGAAAATGTA       TCGGATGGCGAGG GTTG CGTCGCCATCCGG        TTGTCAATTAACGCT  79 33
CYD39_RS03580  757294 ..  757305 -  -4.4  -4.21194   CGGCATTATTGAAAA                GACA ACAC TGTC                 CTCACGCCCGTTTTA  62 120
CYD39_RS03550  751523 ..  751548 - -16.9  -2.87463   AAGGGGCGTGATACA         GGCCCGGTAGC GCAA ACTACCGGGCC          TTCTGCTATCAGGAT 100 34
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdbD NONE
        kdpE  741577 ..  741602 -  -9.7   -2.7471   CATAAAATATAATAT         CGCCGCGAAAA TAAT TATTCGCGACG          CCGAAAATAAATGAC  69 80
CYD39_RS03505  740950 ..  740972 -  -2.8  -3.96148   TTCTCGCATGAGAAA           CTGATTCTTC CGG AAAAAATCAA           AGCTATCCCGCTGAT  54 328
        speF NONE
        potE  737346 ..  737374 - -14.5  -3.18657   TCAAAGAGTGAAAAT        GCCCGGACTACCG TTA CCGCAGCCCGGGC        GCGCCATCAGCCGTG  95 32
CYD39_RS03490  736737 ..  736752 - -10.4  -5.12068   GATATGGAAGAAAAA              GGAGCC GTAA GGCTCC               TTTTTTATATTAACG  93 104
CYD39_RS03475  733504 ..  733542 - -13.1  -2.57244   TCAGCGAGGAAGCGA  CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G   TTTTTAATCAGTTAG  84 37
CYD39_RS03470  733072 ..  733089 -  -3.4  -3.37755   AGATATGCGGAAACA             GCAATC ACGCGG GACTGC              ACGCTCTGCTACACG  48 63
        fldA  732270 ..  732286 -  -6.5  -4.55128   ATGCCGAAATGAAAA              CCGCAAG TCT CTCGCAG              ATATTAATAAAACTG  76 185
         fur  731676 ..  731693 - -11.3  -5.39721   GGAGGATATAAAAAA             GCCAACC GGGC GGTTGGC              TCTTCGAAAGATTTA 100 44
        tcuR  730678 ..  730693 -  -3.2  -3.14683   ACAGGGGTTTAGTAA              GCGTAA AGGG TTGCGC               CTGGCCATTCACCGG  46 3
        tcuA NONE
        tcuB NONE
        tcuC  726494 ..  726512 -    -6  -3.74198   AAAAAAGAGCGCAAA             CATCAGCA ATT TGCTAACG             AAGAAAGCGTGCGGG  60 202
        nagB  719200 ..  719225 - -14.7  -2.87672   GATATCAAAAATTTA         CCGCCCCGC ATTGACTG GCGGGGCGG          AGACAACATTACAGA  89 34
        nagA NONE
        nagC  716735 ..  716751 -  -3.7  -2.86177   ATATCGCAGATTACA              TTCTTGA TGG TCATGAA              CTACCCAGGGAATTT  46 69
        nagD  716004 ..  716020 -  -5.1  -3.49951   GACAGGTTTAGATAA              CGTCG ATCTCGG CGACG              GAAGGGTAAATCCAG  56 1
CYD39_RS03395  714010 ..  714025 - -10.4  -5.64274   TCAGCTATAAAAAAA              GAGCCC CTAA GGGCTC               TTTCGTCATCGTTAA 100 42
CYD39_RS03390 NONE
CYD39_RS03385 NONE
CYD39_RS03380 NONE
CYD39_RS03375 NONE
CYD39_RS03370  712098 ..  712114 -    -3  -3.33815   ATGTGCTCTAACCAA             CTGAGCT ACGT AGC-CAG              ATGATTTCTTCGATG  46 39
CYD39_RS03365 NONE
CYD39_RS03360 NONE
CYD39_RS03355  711765 ..  711792 - -13.6  -3.30597   ATAAACGCAGAAAAG        CAAAAAGCTCGC CGAA GCGAGCTTTTTA         AAGGTGGCTGGGGTA 100 30
CYD39_RS03350  710987 ..  711001 -  -4.2  -4.08216   GCAGGCGTGCTAAAA               CGTCAG GCG CTGAAG               TATGCGTTGGGGTTG  59 110
        miaB  708192 ..  708224 -  -4.8  -4.29325   GATGAAGAGGGAAAA     TTG-CAAGGCCCGTC GGGC GACAGGCCATGACCA      GGAAGCCCGACAGGT  65 77
CYD39_RS03335 NONE
        ybeY  706517 ..  706549 -  -8.4  -2.57988   AAAGGCATGAATGTA     GGCCGGATAA-GGCG CAAG CGCCGCCATCCGGCA      AGCTACTATTCTGCA  63 31
CYD39_RS03325 NONE
         lnt NONE
CYD39_RS03315  702559 ..  702575 - -12.3  -5.76949   TACTCCGAAAAAAAA              GGGTAGC AGC GCTACCC              TCGAAGATTGTTGCC 100 148
        gltJ NONE
        gltK NONE
        gltL  700369 ..  700390 -  -9.4  -2.90714   GTAAAGCGTGAGATA           GCGCGCAC TCTGAC ATGCGCGC            CGGGAAGATTAGTGC  70 34
        rihA NONE
CYD39_RS03290  698037 ..  698070 - -11.9  -3.51633   AGAGAGTTTATAGAA     TAAAGAACACCAC-CC TCT GGCGTGGTGATCTTTA     TCAATGTCACGCCTG  88 32
CYD39_RS03285  696316 ..  696330 - -12.8  -3.65529   ACAGGGGTAGTGAAA               GCGCCG TTA CGGCGC               TTTCGGCTCGTCAAT  95 17
CYD39_RS03260  690684 ..  690704 -  -4.6  -2.74012   CCAGGATTTGAATCA            CCACGGCG TGTAT CACAGTGG            CGAAGTGGTGGGGTT  45 197
        leuS NONE
        lptE NONE
        holA NONE
        nadD  680362 ..  680379 -  -6.9  -2.85668   TAGCGTTACAGGATA             GCGCCTG GCAA CAGGCGA              CCTGGCATTGGTTAC  53 290
CYD39_RS03205  678810 ..  678826 -  -5.1  -3.78934   GGCTGCGGAGAATAA              CAGCC TGTCGGG GGCTG              TCAATGGGCGAAACC  59 69
        rsfS NONE
        rlmH NONE
CYD39_RS03190 NONE
        mrdB NONE
        rlpA NONE
        dacA  672131 ..  672161 - -13.5  -5.48825   CATTACGTAAAAAAA      TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA       CTGATGCATAGTATA 100 76
CYD39_RS03170  671818 ..  671832 -  -2.1  -3.31461   GAGTTACCCGGATAA              GACCGG GTAA CCG-TC               TGGATGTATTACAAT  45 34
        lipB  670952 ..  670966 -  -8.6  -3.10597   TTGTTCACGGAAAAT               TCCTCA TCA TGAGGA               CTGAAGAGGCCATGC  66 159
CYD39_RS03160  669748 ..  669772 -  -4.9  -3.38768   GTATATCATTGATAA          GGGCCATAAAG CAG CCTGACAGCCC          GGCAAAATGTAAAAT  54 98
        lipA  668623 ..  668637 -  -8.5  -5.58454   CGCAGAGTAAAAAAA               CCGGC GAGTT GCCGG               TTTTTTTTGCCTGAA 100 62
        crcB  666965 ..  666981 - -10.8  -4.20042   AGCAAGATTTCAAAA              CCCGCC CTTTC GGCGGG              TTTTTTTTGCGCTTA  88 38
        dcuC  664163 ..  664193 - -13.9  -3.02043   AAGCCTGGTTTAAGA       TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT       TACCGGCTATCAGCC  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT  654662 ..  654687 - -15.5  -5.37345   TTTAATCATAAAAAA         TGCCGCTCAGG TGAA CCTGAACGGCA          TCATTTTTAACCTAC 100 54
CYD39_RS03075  653624 ..  653646 - -12.7  -5.07652   GGTCCCAAAAGAAAA           CCCTCACCG TCTGG CGGCGAGGG           TTTAACTCTCATGAT 100 179
CYD39_RS03070  653103 ..  653122 - -12.2  -3.75897   AAGGGCTAACGGAAA            GAGGATGC GCAG GCATCCTC             TGTGTAAACGCATTA  93 58
        uspG  651133 ..  651159 - -20.2  -4.75372   ATGATGCAGTAAAAA         GCCCTGCCAGGC GTG ACCTGGCAGGGC         GTGTCAGTTTTTAGC 100 49
        dsbG NONE
CYD39_RS03020  641721 ..  641731 -  -2.6  -2.69964   GTGTTAACTACAGTA                 TATT CGA AATA                 ATTAACATAAAGGAT  41 147
CYD39_RS03015 NONE
CYD39_RS03010  639512 ..  639534 - -11.9  -3.01712   CGTTTTGCGTCAATA           CGCCGGCGC AACTG GCGCTGGCG           GATATGCTGCGCGCC  76 353
CYD39_RS03000  637206 ..  637230 - -12.9  -3.13403   CTTTTTTCATCAATA          GCCCTCTCC AGAATAA GGAGAGGGC          ATTTGAATGACAGGT  91 281
        fepB  628742 ..  628792 - -13.5  -3.14211   ATGCTGGCTGATGAA GGGGCGTTTATCCGACTGACCAAA TCGG TCTGGTCAGTCGGATAAG-ACTCC GATAAGGCTAAAACA  93 33
        fepD NONE
        fepG NONE
        fepC  624555 ..  624574 - -12.2  -4.14739   TGATTTACCCGAAAA            GCCGGATA GCGA TATCCGGC             TTTGTCATCTGTGTG  93 46
CYD39_RS02915  615310 ..  615321 -  -4.4  -3.11289   GGAAGGGGAAAATGA                GATG TCAG CATC                 GTTTTTTGCTAATTC  49 71
        entD NONE
CYD39_RS02905 NONE
CYD39_RS02900  613007 ..  613039 -  -9.9  -4.29845   GAACGGAAGCTAAAA     CTGG-CGGCG-CGCG ACCTG CGCGACACCGACCAG     AAGGTGTATGATATT  86 157
CYD39_RS02890 NONE
CYD39_RS02885 NONE
CYD39_RS02880  610806 ..  610823 - -12.7   -5.1361   AGAAAGGTGAAAAAA             GCCGGAC GGGC GTCCGGC              TTAGGCAGGGGATTA 100 38
CYD39_RS02870  606564 ..  606580 -    -8  -3.05844   GCGTTTATTCGAATA              GCCGAA TGCTG TTCGGC              CTGTCCGTACAAGGC  60 487
CYD39_RS02860  603639 ..  603653 -  -4.2  -2.63549   CATCCTGAAGAATAT               CGTCAG CAT CTGACT               CATGAGGGCGAACTA  44 477
CYD39_RS02840  600626 ..  600647 -  -5.1  -3.53012   GCCTGCGGCGTCAAA           CTGTAGGCGG GTT CAGCCTAC-G           TTTATCGTCCGAGCG  56 27
CYD39_RS02830  599894 ..  599907 -  -2.4  -3.32844   CGCGTGACGGGATAA               TGAC GATGAT GTCA                GAGTATTTTGCTGGC  45 72
CYD39_RS02825  599270 ..  599299 - -13.8  -2.96009   CAAAAACGGTACACA       CAAAGCTTTGCA TCGGCT TGCAAAGCTTTG        CATGTTTTTCGAAGA  87 235
CYD39_RS02820 NONE
CYD39_RS02815 NONE
CYD39_RS02810  596115 ..  596147 -  -9.1  -3.20858   TACGATATGTAGGAA      TCCCCGCCGCC CGTTACCCATT GGTGGCGGGGA      ACATTAATTATACAT  70 46
        fimW NONE
CYD39_RS02780 NONE
        fimY  592645 ..  592656 -    -3  -3.59781   AAATAATATGAAAGA                CTAA TTGT TTAG                 TATTTGTTATGTAAT  50 226
        fimZ  591237 ..  591249 -  -2.6  -4.37092   ACCTGGCCGACAAAA                CAGC TTCAC GCCG                CCGGTGACGCCACGC  60 397
        folD NONE
        ybcJ  583813 ..  583846 - -12.5  -2.93818   AAGAAAGCATAATCA     GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA     CTCTGTATCAGGCCA  82 33
CYD39_RS02720 NONE
CYD39_RS02715 NONE
CYD39_RS02710  581485 ..  581507 -  -5.5  -3.97368   CGTGGAACGGATAAA          TCAGCGGCCC CGGC GGGCGGC-GA           GGCGTTTGAAGCGCG  63 448
        ppiB NONE
        lpxH  579003 ..  579013 -  -2.4  -4.08394   ACATGCGTCTTAAAA                 CTCC TGT GGTG                 CGGGACACGCTGCTT  55 121
        purE NONE
        purK  577189 ..  577230 -  -5.7  -3.36492   TGGGGAACGCCACAA CAGCGCGCTATTCGTCAGGC TTC GCCCGATGAGCTG-GCGCCG TTTGCCAAAGCCGAT  56 213
        allD NONE
        allC NONE
        allE  569240 ..  569259 - -13.6  -5.71983   TTAAGCATAAAAAAA            GCCACGGT TCTC ACCGTGGC             AAAATCCAACATAGC 100 74
        allS NONE
        mnmH  555054 ..  555069 - -11.8  -3.35197   CGCGACAGACACTAA              GCCGGC GTCA GCCGGC               AATAAAAGTAAGCTA  85 38
        tesA NONE
CYD39_RS02550 NONE
        cnoX  545338 ..  545374 -  -7.2  -2.91869   CAAGAAATCATGATA   GTGGCCGGATGATGGCG CAAG CGCCTT-ATCCGGCCTG    AGGACGACAGGTAGG  59 72
CYD39_RS02530 NONE
CYD39_RS02525  541990 ..  542002 -  -5.5  -5.40474   ATGTGGCGAAAAAAA                CCGGT TTA ACCAG                CAAAGCCATTCGGTT  95 402
        copA  539315 ..  539344 - -18.1  -3.62597   CTGATGGCTTAATAA       TATATCAGGCAGC TGAT GCTGCCTGATATA        GCGTTTTTACGCTTT 100 32
CYD39_RS02510  538329 ..  538343 - -12.8  -4.36914   GCGCGTTGGAGAAAA               GGGCGC AAT GCGCCC               TGACGGGACGTCAAC 100 52
CYD39_RS02505  537413 ..  537432 -  -3.4  -3.11291   GCGACAATCTGAAGA            TCCGAAGC GAAA GCGTCGGG             ATAATAATAACGATG  45 83
        ybaK  536402 ..  536412 -  -8.2  -3.83998   GTAGCGCAGATGAAA                 CCGG ACT CCGG                 CGCCTATCCACAGTT  71 422
CYD39_RS02490 NONE
CYD39_RS02485  531313 ..  531334 -  -7.9   -4.4518   AAGCAAAACGTAAAA           CCCAGCATC CGCT GCTGCCGGG            GGCTATTGCTGAATT  79 447
CYD39_RS02475  529205 ..  529250 -  -2.5  -5.00616   GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGTTAAAACTCA  74 54
        priC NONE
CYD39_RS02425 NONE
CYD39_RS02420  519308 ..  519348 -  -3.9   -4.2803   TACGGCAAGCTAAAA GGCGGTGGGCCGCGCGC TTTATGAGT GCGCGCGGCGC-C-GCT AATGCGACAGCGTAG  62 24
        acrA  513842 ..  513856 -  -2.8  -3.14878   CTGTTTAAGTTAAGA               CCTG GGCTGAG CAGG               TTGATCACCGCTTGC  45 5
CYD39_RS02400  510630 ..  510645 - -11.8  -5.00616   TTTTTGCGTAAAAAA              GGCCGC TTGC GCGGCC               TTATCAACAGTGAGC 100 44
        tomB  509764 ..  509780 -  -2.3  -2.79133   TAATGGTTTATCAGA              CATAAAT TCT ACCTATG              ATTGTAATAATTTTT  40 39
         hha  509425 ..  509436 -  -5.8   -2.8632   TAATAGAGTATTAGA                GGGA ACGT TCCC                 TGCTATTGGTATGTG  51 137
CYD39_RS02385 NONE
CYD39_RS02380  508199 ..  508222 -  -8.1  -2.94144   GGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGAC  61 33
CYD39_RS02365  505756 ..  505772 -  -2.9  -4.16842   CGGATGCGCAAGAAA              CCAGCAT CCG ATGCCTG              ATGGGTTGCAATTGC  58 246
CYD39_RS02355  505032 ..  505045 -  -2.3  -4.56597   GTGCTGTCGCAAAAA               GCGGT ACGT ACCGA                AGGTAAACAGGCGCC  65 353
        tesB  503675 ..  503689 -  -9.2  -3.17212   TCATCAGGCCATTAA               CGCCGC ATA GCGGCA               TGTTTTTTAATTGTG  70 32
CYD39_RS02315  496483 ..  496501 - -10.3  -3.14344   GATCTCTTCCAGCAA             GCCAGAC ATTCA GTCTGGC             TTTTTTTTGTTTCTA  74 38
CYD39_RS02305  493797 ..  493808 -  -2.2  -3.15663   AGTTATCCTGATCAA                TGAC GAAA GCCA                 ATATGGTAACGCGTA  44 63
        queC  492759 ..  492776 -  -5.5  -3.15396   AACATCAATATAAAT             TACCGTC GTCC GGCGGTA              TTGAGCGATCTACTG  50 335
CYD39_RS02245  481504 ..  481519 - -11.8  -2.92091   ATAGGCATCTACAGA              CCCGGC TTCT GCCGGG               TCTTGTTGTTGCTAT  80 40
        ampG  479776 ..  479788 -  -6.3  -3.35996   GATGTTGAGGGATAA                TTGGT ATA ACCAA                TGTAAAAATAAAACA  59 252
CYD39_RS02235 NONE
CYD39_RS02230 NONE
CYD39_RS02225 NONE
CYD39_RS02220 NONE
        cyoE  474727 ..  474747 - -11.1   -5.9003   AAATGAATAAAAAAA            CCGCCGTTT GTG ACACGGCGG            TTTTTTCAATAGCAA 100 47
CYD39_RS02200  469715 ..  469758 -  -7.4  -3.14463   AACTTCCGCGATTAA GTTGTTATGCCGGATAG-AGC CTT GCCGCCATCCGGCAATACAGC ATTCATCCTTTGCTG  62 28
        panE NONE
        yajL  467506 ..  467520 -  -7.1   -3.2614   GATTGCGCATATTAA               TGCGC GTCTG GCGCA               GGGCGAACGCCCGTA  62 138
        phnR  464661 ..  464671 -  -3.2  -2.53379   AGAGAAATAAATCAG                 TCCA CGC CGGA                 TGATGCTGCGCTTAT  42 109
        phnS NONE
        phnT NONE
        phnU  461558 ..  461568 -  -5.4  -2.84602   TTTAGGTGACCAAAT                 TAGC ATG GCTA                 GCTCCTTACGCCGGT  51 23
        phnV  460345 ..  460389 -  -2.2  -3.82097   GTGAAAGCCATTAAA GCGAAAATTGAAGCCGAA GAAGAAAAT TTCGACTTCAGTATTCTC GATAAGGTGGTAGAA  52 402
        xseB NONE
        ispA NONE
CYD39_RS02130 NONE
CYD39_RS02125  454903 ..  454945 -  -8.3  -3.68351   TCGGTATTATTTAAA GGGTTTGCCGGATGGCGGCG TAAA CGCCTT-ATCCGGCCTACCC CCGAACAATATATCG  72 85
CYD39_RS02090  449843 ..  449853 -  -6.8  -4.21812   CGGGAGTGAAAAGAA                 CGCA ATT TGCG                 TTTCTAAATATTTCG  72 272
CYD39_RS02085  448902 ..  448925 - -12.4  -2.72144   GCATGCGCCCGAAAC          GGGCCAGAGG GCGA CCTCTGGCCT           TTTTTGCAGGTTTAG  82 37
        acpH NONE
CYD39_RS02035  440743 ..  440760 - -12.7  -5.28176   CTTACGCATAAAAAA             GGCTCGC ATTC GCGAGCC              TTTTATCAATGCACT 100 44
        sbcD NONE
        sbcC  428793 ..  428807 -  -5.6  -4.64861   CCTGCCGAAAATAAA               GGCGCA TGT TGCGCG               CTGTGGCTGTGAATT  74 164
        araJ  427458 ..  427469 -  -5.8  -3.29144   TGAGCGCCTGTACAA                GACG GTTC CGTC                 GCTGATGAAATCGTT  54 157
        rdgC  425594 ..  425616 -    -9  -3.35679   TGCCGCTATTTATAA           CGGAGCGGTG AGT CCCCTCTCCG           GCGGAGAGGGACCCT  71 45
        proC  421910 ..  421952 -  -2.8  -4.18676   TTACAAAGCAAAGAA TGCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCATGACGTCCAGCC GGGCTTCAGGATTTA  58 31
CYD39_RS01925  416212 ..  416239 - -12.8  -3.69216   TGGTGAGGTAAAAGA        CGCCCGATAAACG TTG CGCT-ATCGGGCG        TGCGCTATTACATCG  95 33
CYD39_RS01915  415262 ..  415280 -  -8.8  -4.13767   TGGCCGAGGCCAAAA             CGGGCAAG ACG CTTGCGCG             GGAAATGTTGCCCGG  80 175
        ampH  411521 ..  411556 -  -3.9  -4.78753   CGAATATTAACAAAA    GGTTGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG    ACTCAGGATGCAGGA  71 28
        hemB  406318 ..  406336 - -13.8   -3.5936   TGTAAAGTCGGGAAA             GGGCGGCA GCG CGCCGCCC             TGTAACAGAATTAAC 100 36
        prpR  398639 ..  398663 - -12.2  -4.91109   GTTGCATCATAAAAA         TACCCGCCTGG GTTT CC-GGCGGGTA          TTTTTATTCCTGGCA 100 117
CYD39_RS01850  397130 ..  397145 - -10.4  -3.05816   TTATGCTCCACGGAA              CCAGGC CAGC GCCTGG               CTAAGCTACGATGTG  69 360
        mdsA NONE
        mdsB NONE
        mdsC  375039 ..  375088 - -15.5  -3.10344   TTTGCAGGTAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTATTTGGGCT AACCTTGCTTTTTCT  93 24
CYD39_RS01725  367023 ..  367048 - -13.3  -4.18018   CCTGGCGATTGAAAA         TGGTCTGGCGT TTCA ACGCCAGACCG          TAGCGACAATTATTT 100 35
CYD39_RS01720 NONE
CYD39_RS01715 NONE
        stbD NONE
CYD39_RS01705  361445 ..  361463 -  -3.2  -3.63991   TATGATGCGTAATAA             TAATACGT TCT ACACATTA             ATTGAGTCAGATAAT  51 198
CYD39_RS01695  359738 ..  359756 -  -3.1  -3.09286   ATATTACGGTAAAAC             TCACGCT AACGG ATCGTGA             AGTGGATCTGGTGGA  45 496
        phoE  347404 ..  347448 -  -9.4  -2.57463   AACTGTCGGCATAAC CCTGCTGTCATGCCTGATGGCG TAG CGCCATCAGGCACAAT-GC-GA CTTATCAGAACTGGT  68 30
        pepD  343056 ..  343092 -  -9.5  -4.66318   AGCACGTTAATAAAA   CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG   GATTAGCGTGAAGGT  91 379
CYD39_RS01585  339245 ..  339266 -  -8.7  -3.91798   TAACGGGGAATGAAA           CCTGGCAAA AGAT TATGCCAGG            CGAATGGGCGTTATT  73 36
CYD39_RS01570  335027 ..  335044 - -14.1  -5.08088   AAGCGGCAAGAAAAA             GCCCCGC GAAA GCGGGGC              AGGAAAGAGGCGAGA 100 45
CYD39_RS01565  334163 ..  334183 - -11.8  -2.97676   ACGGAGTGAAACAAT            CCCGCCGC GGTGA GCGGCAGG            TTGCTTACAAGGTGA  80 30
CYD39_RS01555  333439 ..  333462 - -11.8  -3.87815   CCCGACCTGGATAAA          GCCCGTTATC CAGG AATAACGGGC           AAAAATATTTACTCA  93 34
        pagN  332129 ..  332175 -  -8.7  -2.55544   TGATGACTGAATTGA GGCATCGAGATATG-CGACTGG TCAG CCAGTCGTCTTTTGACGATGCC CAATACAAAACATGA  63 256
CYD39_RS01465  320079 ..  320106 -  -9.2  -4.78752   ATCATAAGTTAAAAA        GCCGGAAAGA AAATTAAA TCTTCCCGGC         TTTTTGTTTATTTAA  90 56
CYD39_RS01430 NONE
CYD39_RS01425  316005 ..  316037 -  -9.5  -3.88698   CACTGATAGAAAATA      GTACAAAAATTTT GCCCTCA AAAATTTTTGTAC      GAAAACCGATTGATC  81 74
CYD39_RS01420  315336 ..  315346 -  -4.6  -3.85698   GTCCGGTTCGATAAA                 GGAG TGA CCCC                 TAATGGCATTAACCG  58 446
        rnhA  313707 ..  313724 -  -2.6   -2.7976   GGCAATATCGCAAAC             CGGATG GCTAAG CTTCCG              CCTGGTAGCCACTAT  41 15
        gloB  312163 ..  312175 -  -3.3  -2.93623   TTGCTTAAAAGACGA                CCGAT CAT AACGG                CGAAGTTAGCGAATG  44 55
        mltD  310721 ..  310741 - -11.1  -4.31085   TATAGCAATTTAAAA            GGCGCCG GGGGAAG CGGCGCC            TTTTGGCTTTTTCGT  90 50
CYD39_RS01365  306591 ..  306616 -  -8.3  -4.10161   CACCAGGCGCGAAAA         CCTG-GCAAGCA ACC TGCTGGCGCAGG         ACCTGCATCTGGATG  77 145
        metN NONE
        metI NONE
        metQ  296417 ..  296434 - -12.7  -3.64915   TTGCATAAATGACAA             GACGGGC AATA GCCCGTC              CTGAATAATATTACA  95 63
        rcsF  295945 ..  295969 -  -2.1  -2.90349   TGTTCAAACTGAAAG          CTGCTCATTTC GCC GAAATATTCAG          GGCGGACCCGATACA  41 5
        tsaA  295164 ..  295182 - -13.2  -3.13343   AGTTGAACGATCGAA             CAGGCTCA ATG TGAGCCTG             ATACAAAAAAAGTGA  91 88
        proS  293348 ..  293368 - -16.9  -4.72497   CACTCACTAATAAAA            GGCCTCGCA GGG TGCGAGGCC            TTTACATATCTGCCG 100 73
CYD39_RS01275 NONE
         rof  290765 ..  290796 -  -3.7  -5.04868   GTAAATTAAAGAAAA     TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA      CGAGACACCACGCCG  77 229
         map  263790 ..  263820 -  -7.5   -4.7497   GCCACCCATTAAAAA      GCCGGATGGTGGCG TGAA CGCCTT-ATCCGGC       CTACGTATTTACTCT  83 213
        glnD NONE
        dapD  260215 ..  260230 - -11.8  -3.75153   TCGCCGTAATGCAAA              GGGGGC TGTT GCCCCC               ACTTTTCACTCGCTT  93 39
CYD39_RS01140  258272 ..  258289 -  -5.6  -3.09452   ATCCGGCAACACACA             GCTTAC TTACGG GTAAGC              TTGTCCAGATCGGCT  52 10
        mtnN NONE
        btuF NONE
CYD39_RS01110  251476 ..  251517 - -12.5  -4.25104   TCCGTGGGATGAAAA TTATGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACAACA TCTTTCCTGTAGGCC 100 73
CYD39_RS01090  246903 ..  246930 -  -9.9  -5.20534   ATGAACCAATAAAAA       GCCGGGT--GGCG GCTT CGCCTTACCCGGC        CTACGTTGTTTCTGG 100 51
        thpR NONE
        sfsA  226675 ..  226686 -  -5.8  -4.25283   ACCCTGTGAGGAAAA                GCGT ATTT ACGC                 ACGCGGCCAGAATAC  67 64
CYD39_RS01005  226046 ..  226063 - -12.7  -4.21772   GGCAATAAAGAATAA             GGCGGGA AAAC TCCCGCC              TGTCATAAATAGGGT 100 55
      gluQRS NONE
        pcnB NONE
        folK NONE
        panB  222147 ..  222158 -  -2.2  -4.37886   GTAGGCTGGATAAAA                CG-CG TCG CGTCG                TCATCCGGCACGGTC  59 48
        panC NONE
        panD  220575 ..  220593 -  -4.4  -3.79533   CAAAGCAGCAAAAGA             CGCCGGTT TCC ATCTGGCG             GTCACCACGGTGAGA  58 158
CYD39_RS00960  218058 ..  218079 - -11.5  -4.68209   ACCTCAATAAACAAA           GGGGCCAGC CGAC GCTGGCCGC            CAGGATCAGTTATAT 100 31
CYD39_RS00955 NONE
CYD39_RS00950 NONE
CYD39_RS00945  213688 ..  213701 -  -3.8  -3.27525   CTTGCTGAAACCCAA               CGCT TCTCTC AGCG                AATCTGAATCTCCAG  48 20
CYD39_RS00930  211076 ..  211108 -  -8.4  -2.95459   AGTAAGCGCAGAAAT     GCCGGATGGCGTCGC TAAA GCGACTT-ATCCGGC      CTATAGCTAATGGCT  65 40
CYD39_RS00920  207906 ..  207925 -   -15  -3.30124   CGCCACCCGGCATAA            TGCCCGGC ATAC GCCGGGCA             TTAATGGTTATTTCG 100 33
CYD39_RS00910  205649 ..  205668 - -12.2  -3.71487   CATCATAGCTAACAA            TGACCGTG GATG CACGGTCA             TTATTTCAGCAATAG  89 53
        speE NONE
        speD  203917 ..  203937 -  -6.1  -2.71731   GCCAGTGGTGAATCA            GACCGCA GAAATAT TGCGGCC            GTAGTAAATCTCGCG  53 2
CYD39_RS00870  198556 ..  198597 -  -5.1  -3.36492   CTGGTAATGCTATAA CTGGATGAGGGGCAGCCATT TTT AATGCCTGCGC-TCTTCCGG CACATAATAAAAGTT  54 150
CYD39_RS00865  197815 ..  197836 - -18.7  -3.09273   GCGGTGTAACAGAGA           CGGGCCCGG ATTT CCGGGCCCG            AATGGCGCTTCTTAT 100 37
CYD39_RS00850  194999 ..  195013 -  -7.1  -3.36492   GTGCTAACCCCACAA               GAGCG GGAAT CGCTC               AACAATTTGGTCGGT  58 499
CYD39_RS00835  192973 ..  192994 - -17.3  -2.80077   GCGGTATAAAAGTGA           CTGGCCCGG ATTT CCGGGCCAG            TTTTTACCGCGAAGA 100 29
CYD39_RS00825 NONE
CYD39_RS00820  187395 ..  187418 - -10.3  -2.67694   AGCATCAGCAGATCA          CCCACACGC ATGAAG GCGTATGGG           CGGCCAATTCCGGCA  66 161
        aroP  177850 ..  177873 -   -16  -3.51924   CTGTGAGGCAGATAA          CACCCTCCCC GGAC GGGGAGGGCG           GAAAAGTAACGTCAC 100 43
CYD39_RS00785 NONE
CYD39_RS00780  175188 ..  175202 -  -3.4  -4.17701   CTGACAAAGTAGAAA               CCCCCA AAG CGGCGG               TGTCGATGGCGAAGA  58 194
        nadC  172852 ..  172874 -   -17  -2.91582   CAGGTGATTTATAGA           CCCGACGGCG CAG CGCCATCGGG           TGGAGAGGATCAGCG 100 35
        ppdD NONE
        gspE NONE
        hofC  169474 ..  169495 -  -7.1  -3.01712   GGCCGGTGGGCAATA           CCGCCCGCG ATAT CCTGGGCGG            TCTACGCTCAGCCTG  54 168
        coaE NONE
        zapD NONE
        yacG  166538 ..  166559 -  -2.8  -4.05714   ATGGTGAATGATAAA           GCGTTGCG TCTCTC CGCCGCGC            GTGATGGGGCAGGGC  56 240
CYD39_RS00720  164294 ..  164311 - -12.7  -5.09685   GAACACAGATAAAAA             GGCGCAG GCGA CTGCGCC              TTTTTTATGGATGCA 100 475
        leuL  136571 ..  136588 - -14.1  -5.64274   TCAGGCATAAAAAAA             CCCGCGC AACG GCGCGGG              TTTTGTTTGACTTCG 100 48
        leuA  134955 ..  134967 -  -3.3  -2.62263   AGTTCTTCGACATTA                CACGG TTT CCTTG                TTGTTCTCTTTATTT  42 10
        leuB NONE
        leuC NONE
        leuD  131709 ..  131727 -  -8.8  -5.30686   AAGACGTATAAAAAA             TGCCGGAA TAT CCCCGGCA             TGAGCGACTGATGAG  95 140
CYD39_RS00570  129483 ..  129507 -  -7.2  -3.62518   TTAAAGAGTGGCAAA          GGACTTGAGA GGTAG CCTCAAATCC          CTTCGCCGGCATTAT  67 151
CYD39_RS00565 NONE
        thiP NONE
        thiQ  125697 ..  125713 -  -6.5    -3.273   GGATAAAACCGAACA              CGCGCTG CAT CAGCACA              GTATGTTCACGATCC  56 507
        araB  122359 ..  122369 -  -2.4  -3.48529   ATAATTATCAAAAAT                 CGTC ATT GTCG                 TGTCCTTAATGAGTC  47 31
        araA  120815 ..  120852 -  -5.5  -2.62263   ATTCGGCCTACAGGA   CCGTAGGCCCGGTAA-AC GCA GTGCCACCGGGCATTCAG   ACTTCACTTTTAGCG  50 35
        araD  119994 ..  120013 - -12.8  -3.20858   GACCAGACTCATCAA            CGCGCCCC CCAT GGGACGCG             TTTTTAGAGGCATTA  86 38
        tnpA  116938 ..  116956 -  -7.4  -2.74019   GAGAAGCCCGAAGGA             TCATCAGC CAC GCTGATGT             TGAATGTATTGCTTT  58 10
CYD39_RS00500 NONE
        polB  114158 ..  114187 -  -3.5  -2.66435   ATTGCGAGTATACGA       CCCCGCTACCA GGCTAATG TGGTAGTGGCG        TTAATTAGGTCCAGG  42 88
        rapA NONE
        rluA  110406 ..  110447 - -12.5  -4.25104   TCCGTGGGATGAAAA TTATGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACGTTA ATGAATGTAGGCCGG 100 77
        lptD  105734 ..  105744 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC AAT GCGG                 ATTACGTTGTAAATC  65 48
        surA  104442 ..  104452 -    -4  -3.11569   TTAGTTACTCAAAAT                 CTTA ACG TAAG                 CGCTGGCGCGCTGTT  47 0
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH  101302 ..  101357 -  -9.1  -3.53811   CGGATGGCGGCGAAA CGCCTTATCCGGCCTAC-TCTTGAGCC AGAT GTCGCCAGATGTAGGCCTGATAAG-CG TAGCGCCATCAGGCA  73 49
CYD39_RS00420   94188 ..   94199 -  -3.6  -4.11371   CAAGAGGGGGTAAAA                GGGC AGGG ACCC                 ATGGTGATAGCATTT  60 408
CYD39_RS00380 NONE
        caiA   85256 ..   85289 -  -7.3   -2.8294   TAGGCCGGATAAGCA     CAGCGCCATCCGGCA TGAT TGTCTGATGGCGACG      CCTCGCGTCTTATCA  58 58
        caiB   83950 ..   83996 -  -7.3   -3.6682   CTTTATCCACTGAAA TCAGGCGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCGTTTAA TCCTCAACTTTGGCC  67 22
        caiC   82345 ..   82375 -  -5.3  -2.76418   TCTCCAGATAAATAG       TTTTCCGGCGGGA GGGAT TCCTGCCGGAAGG       TTTATTTCAGATTTT  49 27
        caiD   81470 ..   81512 - -13.6  -2.60496   TGGCGGCGTAAACAC CTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAG CGAAGCGCCATCCGG  86 51
        caiE   80594 ..   80615 -  -5.1  -3.53224   CAGCGTCTGGTGAAA           GTCGTGAGT ATCG ACTCTCAAC            TCTATCGCCGATTGA  55 242
CYD39_RS00335   74883 ..   74901 - -11.8  -3.99405   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTTTGCC  93 411
        citN   67027 ..   67037 -  -2.4  -3.24232   TTTGCGGCAAAGACA                 CCGC CGT GCGT                 TTTTTTACACCATCA  44 30
CYD39_RS00285 NONE
        oadA NONE
CYD39_RS00275   63515 ..   63537 - -12.1  -4.27192   AAATTTGGATGAAAA           TGGGATACG ACATG CGTATCCCA           TCCACTATTACATCG  95 33
CYD39_RS00270 NONE
CYD39_RS00265   60952 ..   60962 -  -5.4   -3.0464   AACGCAGGGGCAATA                 TACC GCC GGTA                 CCACGGTGGTGGATA  50 166
        rpsT   52231 ..   52245 -  -8.5  -5.64274   GCAGGCATAAAAAAA               CCCGC TTTAC GCGGG               TTTTTCTACAAAGCT 100 57
CYD39_RS00215   50404 ..   50417 -  -3.8  -2.91276   TCTTGTTGCATAAAT               GGCA TGGTGG TGCC                TCCCATATTCGAGGG  46 56
CYD39_RS00210   48332 ..   48364 - -15.6  -3.06492   GTACCTACCGTAATA      CTTCCGGCTGCGGA ACTAG CCCGCAGCCGGAAT      CATTCTACAAGTTCA  93 30
CYD39_RS00175   38702 ..   38734 - -11.4  -4.74052   ATTAAAGAAAAACAA      TGTCTGTAGTCGTG TCATT CACGACTACAAACC      GGGGAAATTAAGTAA 100 63
CYD39_RS00170   37064 ..   37094 - -16.3  -2.87274   TTGCATAACTAAGTA       TGTTATGCGGCCG GTTAT CGACCGCATAACA       TTATGGCTTATTTGC 100 33
CYD39_RS00160   34272 ..   34289 -  -2.7  -5.16472   AAAAATGCCAAAAAA             CTGATAT CAAC ATTTCAG              TCGACCTTTCTTTTT  79 114
CYD39_RS00150   32422 ..   32436 -  -4.2  -3.49738   AAGATAAGCAATTAA               CAGTGC TAC GCATTG               TCTATGACTGAACCG  52 136
CYD39_RS00085 NONE
CYD39_RS00080 NONE
CYD39_RS00055   10836 ..   10850 -  -2.8  -3.70022   GGAATAGAAATAACA               GCGA TTAATCG TCGC               CAATGACTTTAAGTC  50 15
        msyB   10056 ..   10079 -  -8.2  -3.69395   TCTATGATCTAATAA          GGGGGAAA AGAAAATA TTTCCCCC           TGTGAGGGCATTCAC  69 37
        satP    9338 ..    9370 -  -7.7  -2.67903   AAAATACTGATAGTA      GGGTTATTCCTCCCG GTG CGGGAGGAATAAAAG      AGATTTAGTGCGCCT  59 30
CYD39_RS00030    5906 ..    5928 -  -4.2  -3.05463   AGTCCTTGCAGGGAA           TTTTCTGCGA CTT TAGCAAAAAA           ACGCCGCAGAGTTGA  47 62
        yaaA    5021 ..    5060 -  -9.3   -3.1505   ATGACCCGCCAGTAA CCATTGCGCCCGGT-GGCG ATGT CGCTTACCGGGC-CTATGG  GTGGTGTCGATTTGT  70 78
