locus-tag class description SEEA1960_RS00005 PF00308 Bacterial dnaA protein SEEA1960_RS00005 PF11638 DnaA N-terminal domain SEEA1960_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SEEA1960_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SEEA1960_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SEEA1960_RS00010 PF02767 DNA polymerase III beta subunit, central domain SEEA1960_RS00015 PF02463 RecF/RecN/SMC N terminal domain SEEA1960_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus SEEA1960_RS00020 PF00204 DNA gyrase B SEEA1960_RS00020 PF18053 DNA gyrase B subunit insert domain SEEA1960_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS00020 PF01751 Toprim domain SEEA1960_RS00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS00025 PF03466 LysR substrate binding domain SEEA1960_RS00030 PF13378 Enolase C-terminal domain-like SEEA1960_RS00030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS00035 PF07690 Major Facilitator Superfamily SEEA1960_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS00060 PF00672 HAMP domain SEEA1960_RS00060 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS00060 PF01627 Hpt domain SEEA1960_RS00060 PF00072 Response regulator receiver domain SEEA1960_RS00065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEA1960_RS00070 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS00070 PF00072 Response regulator receiver domain SEEA1960_RS00080 PF00384 Molybdopterin oxidoreductase SEEA1960_RS00080 PF18364 Molybdopterin oxidoreductase N-terminal domain SEEA1960_RS00080 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS00085 PF02613 Nitrate reductase delta subunit SEEA1960_RS00090 PF14376 Haem-binding domain SEEA1960_RS00090 PF00034 Cytochrome c SEEA1960_RS00090 PF03150 Di-haem cytochrome c peroxidase SEEA1960_RS00095 PF00005 ABC transporter SEEA1960_RS00100 PF03379 CcmB protein SEEA1960_RS00105 PF01578 Cytochrome C assembly protein SEEA1960_RS00110 PF04995 Heme exporter protein D (CcmD) SEEA1960_RS00115 PF03100 CcmE SEEA1960_RS00120 PF01578 Cytochrome C assembly protein SEEA1960_RS00120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEA1960_RS00125 PF08534 Redoxin SEEA1960_RS00130 PF03918 Cytochrome C biogenesis protein SEEA1960_RS00135 PF12566 Protein of unknown function (DUF3748) SEEA1960_RS00135 PF07676 WD40-like Beta Propeller Repeat SEEA1960_RS00140 PF07119 Protein of unknown function (DUF1375) SEEA1960_RS00145 PF00011 Hsp20/alpha crystallin family SEEA1960_RS00150 PF00011 Hsp20/alpha crystallin family SEEA1960_RS00155 PF06826 Predicted Permease Membrane Region SEEA1960_RS00155 PF02080 TrkA-C domain SEEA1960_RS00160 PF02656 Domain of unknown function (DUF202) SEEA1960_RS00165 PF02656 Domain of unknown function (DUF202) SEEA1960_RS00175 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS00180 PF02447 GntP family permease SEEA1960_RS00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS00185 PF03466 LysR substrate binding domain SEEA1960_RS00195 PF07690 Major Facilitator Superfamily SEEA1960_RS00205 PF13939 Toxin TisB, type I toxin-antitoxin system SEEA1960_RS00215 PF08049 IlvB leader peptide SEEA1960_RS00220 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS00220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS00220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS00225 PF01842 ACT domain SEEA1960_RS00230 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS00230 PF00455 DeoR C terminal sensor domain SEEA1960_RS00235 PF00294 pfkB family carbohydrate kinase SEEA1960_RS00240 PF07690 Major Facilitator Superfamily SEEA1960_RS00250 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS00250 PF00072 Response regulator receiver domain SEEA1960_RS00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS00255 PF07730 Histidine kinase SEEA1960_RS00255 PF05231 MASE1 SEEA1960_RS00260 PF07690 Major Facilitator Superfamily SEEA1960_RS00265 PF07690 Major Facilitator Superfamily SEEA1960_RS00270 PF06711 Protein of unknown function (DUF1198) SEEA1960_RS00285 PF07690 Major Facilitator Superfamily SEEA1960_RS00290 PF00232 Glycosyl hydrolase family 1 SEEA1960_RS00300 PF00158 Sigma-54 interaction domain SEEA1960_RS00300 PF00874 PRD domain SEEA1960_RS00310 PF03610 PTS system fructose IIA component SEEA1960_RS00310 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS00320 PF03609 PTS system sorbose-specific iic component SEEA1960_RS00325 PF03613 PTS system mannose/fructose/sorbose family IID component SEEA1960_RS00330 PF03841 L-seryl-tRNA selenium transferase SEEA1960_RS00335 PF07071 KDGP aldolase SEEA1960_RS00340 PF04754 Putative transposase, YhgA-like SEEA1960_RS00345 PF00892 EamA-like transporter family SEEA1960_RS00350 PF02308 MgtC family SEEA1960_RS00355 PF00689 Cation transporting ATPase, C-terminus SEEA1960_RS00355 PF00690 Cation transporter/ATPase, N-terminus SEEA1960_RS00365 PF00857 Isochorismatase family SEEA1960_RS00370 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS00380 PF03797 Autotransporter beta-domain SEEA1960_RS00385 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS00390 PF01527 Transposase SEEA1960_RS00405 PF01055 Glycosyl hydrolases family 31 SEEA1960_RS00405 PF13802 Galactose mutarotase-like SEEA1960_RS00410 PF05170 AsmA family SEEA1960_RS00415 PF00860 Permease family SEEA1960_RS00420 PF03616 Sodium/glutamate symporter SEEA1960_RS00430 PF00270 DEAD/DEAH box helicase SEEA1960_RS00430 PF00271 Helicase conserved C-terminal domain SEEA1960_RS00430 PF17191 RecG wedge domain SEEA1960_RS00435 PF00588 SpoU rRNA Methylase family SEEA1960_RS00435 PF12105 SpoU, rRNA methylase, C-terminal SEEA1960_RS00440 PF04607 Region found in RelA / SpoT proteins SEEA1960_RS00440 PF02824 TGS domain SEEA1960_RS00440 PF13291 ACT domain SEEA1960_RS00445 PF01192 RNA polymerase Rpb6 SEEA1960_RS00450 PF00625 Guanylate kinase SEEA1960_RS00455 PF03120 NAD-dependent DNA ligase OB-fold domain SEEA1960_RS00455 PF01653 NAD-dependent DNA ligase adenylation domain SEEA1960_RS00460 PF03458 UPF0126 domain SEEA1960_RS00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS00470 PF03466 LysR substrate binding domain SEEA1960_RS00475 PF03755 YicC-like family, N-terminal region SEEA1960_RS00475 PF08340 Domain of unknown function (DUF1732) SEEA1960_RS00485 PF01138 3' exoribonuclease family, domain 1 SEEA1960_RS00485 PF03725 3' exoribonuclease family, domain 2 SEEA1960_RS00490 PF00156 Phosphoribosyl transferase domain SEEA1960_RS00495 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS00500 PF00692 dUTPase SEEA1960_RS00505 PF04127 DNA / pantothenate metabolism flavoprotein SEEA1960_RS00505 PF02441 Flavoprotein SEEA1960_RS00510 PF04002 RadC-like JAB domain SEEA1960_RS00515 PF00830 Ribosomal L28 family SEEA1960_RS00520 PF00471 Ribosomal protein L33 SEEA1960_RS00525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SEEA1960_RS00525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SEEA1960_RS00525 PF06827 Zinc finger found in FPG and IleRS SEEA1960_RS00530 PF01467 Cytidylyltransferase-like SEEA1960_RS00535 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SEEA1960_RS00540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEA1960_RS00545 PF00534 Glycosyl transferases group 1 SEEA1960_RS00545 PF13439 Glycosyltransferase Family 4 SEEA1960_RS00560 PF00534 Glycosyl transferases group 1 SEEA1960_RS00560 PF13439 Glycosyltransferase Family 4 SEEA1960_RS00565 PF01501 Glycosyl transferase family 8 SEEA1960_RS00565 PF08437 Glycosyl transferase family 8 C-terminal SEEA1960_RS00570 PF08437 Glycosyl transferase family 8 C-terminal SEEA1960_RS00570 PF01501 Glycosyl transferase family 8 SEEA1960_RS00575 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) SEEA1960_RS00585 PF00534 Glycosyl transferases group 1 SEEA1960_RS00590 PF04932 O-Antigen ligase SEEA1960_RS00595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEA1960_RS00600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEA1960_RS00605 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS00610 PF00155 Aminotransferase class I and II SEEA1960_RS00615 PF00107 Zinc-binding dehydrogenase SEEA1960_RS00615 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS00625 PF00535 Glycosyl transferase family 2 SEEA1960_RS00630 PF04748 Divergent polysaccharide deacetylase SEEA1960_RS00635 PF01551 Peptidase family M23 SEEA1960_RS00640 PF01676 Metalloenzyme superfamily SEEA1960_RS00640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SEEA1960_RS00645 PF00581 Rhodanese-like domain SEEA1960_RS00650 PF00462 Glutaredoxin SEEA1960_RS00655 PF02556 Preprotein translocase subunit SecB SEEA1960_RS00660 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SEEA1960_RS00660 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SEEA1960_RS00665 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS00665 PF06426 Serine acetyltransferase, N-terminal SEEA1960_RS00670 PF07690 Major Facilitator Superfamily SEEA1960_RS00675 PF13378 Enolase C-terminal domain-like SEEA1960_RS00675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS00685 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS00690 PF00588 SpoU rRNA Methylase family SEEA1960_RS00695 PF01070 FMN-dependent dehydrogenase SEEA1960_RS00700 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS00700 PF07729 FCD domain SEEA1960_RS00705 PF02652 L-lactate permease SEEA1960_RS00710 PF13018 Extended Signal Peptide of Type V secretion system SEEA1960_RS00710 PF05662 Coiled stalk of trimeric autotransporter adhesin SEEA1960_RS00710 PF05658 Head domain of trimeric autotransporter adhesin SEEA1960_RS00710 PF03895 YadA-like membrane anchor domain SEEA1960_RS00715 PF11622 Protein of unknown function (DUF3251) SEEA1960_RS00720 PF10928 Protein of unknown function (DUF2810) SEEA1960_RS00730 PF05068 Mannitol repressor SEEA1960_RS00735 PF01232 Mannitol dehydrogenase Rossmann domain SEEA1960_RS00735 PF08125 Mannitol dehydrogenase C-terminal domain SEEA1960_RS00740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS00740 PF02378 Phosphotransferase system, EIIC SEEA1960_RS00740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS00745 PF00043 Glutathione S-transferase, C-terminal domain SEEA1960_RS00745 PF13417 Glutathione S-transferase, N-terminal domain SEEA1960_RS00750 PF03841 L-seryl-tRNA selenium transferase SEEA1960_RS00750 PF12390 Selenocysteine synthase N terminal SEEA1960_RS00755 PF03144 Elongation factor Tu domain 2 SEEA1960_RS00755 PF09106 Elongation factor SelB, winged helix SEEA1960_RS00755 PF09107 Elongation factor SelB, winged helix SEEA1960_RS00755 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS00760 PF00480 ROK family SEEA1960_RS00765 PF00171 Aldehyde dehydrogenase family SEEA1960_RS00770 PF07944 Beta-L-arabinofuranosidase, GH127 SEEA1960_RS00780 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS00785 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS00790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEA1960_RS00795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS00795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS00800 PF03480 Bacterial extracellular solute-binding protein, family 7 SEEA1960_RS00805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SEEA1960_RS00810 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SEEA1960_RS00815 PF16154 Domain of unknown function (DUF4862) SEEA1960_RS00820 PF04074 YhcH/YjgK/YiaL SEEA1960_RS00825 PF02615 Malate/L-lactate dehydrogenase SEEA1960_RS00830 PF09339 IclR helix-turn-helix domain SEEA1960_RS00830 PF01614 Bacterial transcriptional regulator SEEA1960_RS00835 PF13247 4Fe-4S dicluster domain SEEA1960_RS00840 PF00155 Aminotransferase class I and II SEEA1960_RS00845 PF00128 Alpha amylase, catalytic domain SEEA1960_RS00850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SEEA1960_RS00855 PF12833 Helix-turn-helix domain SEEA1960_RS00870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS00870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS00875 PF05360 yiaA/B two helix domain SEEA1960_RS00880 PF01757 Acyltransferase family SEEA1960_RS00890 PF13983 YsaB-like lipoprotein SEEA1960_RS00895 PF02091 Glycyl-tRNA synthetase alpha subunit SEEA1960_RS00900 PF05746 DALR anticodon binding domain SEEA1960_RS00900 PF02092 Glycyl-tRNA synthetase beta subunit SEEA1960_RS00930 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS00935 PF01381 Helix-turn-helix SEEA1960_RS00940 PF11254 Protein of unknown function (DUF3053) SEEA1960_RS00945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEA1960_RS00945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEA1960_RS00950 PF13488 Glycine zipper SEEA1960_RS00950 PF00691 OmpA family SEEA1960_RS00955 PF18364 Molybdopterin oxidoreductase N-terminal domain SEEA1960_RS00955 PF00384 Molybdopterin oxidoreductase SEEA1960_RS00955 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS00960 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS00965 PF03352 Methyladenine glycosylase SEEA1960_RS00970 PF03797 Autotransporter beta-domain SEEA1960_RS00975 PF00419 Fimbrial protein SEEA1960_RS00980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS00980 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS00985 PF13954 PapC N-terminal domain SEEA1960_RS00985 PF13953 PapC C-terminal domain SEEA1960_RS00985 PF00577 Outer membrane usher protein SEEA1960_RS00990 PF00419 Fimbrial protein SEEA1960_RS00995 PF00419 Fimbrial protein SEEA1960_RS01000 PF00884 Sulfatase SEEA1960_RS01000 PF08019 Phosphoethanolamine transferase EptA/EptB SEEA1960_RS01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS01045 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS01050 PF00005 ABC transporter SEEA1960_RS01050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS01055 PF00005 ABC transporter SEEA1960_RS01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS01060 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS01065 PF01053 Cys/Met metabolism PLP-dependent enzyme SEEA1960_RS01075 PF13940 Toxin Ldr, type I toxin-antitoxin system SEEA1960_RS01080 PF11658 Cellulose biosynthesis protein BcsG SEEA1960_RS01085 PF11120 Cellulose biosynthesis protein BcsF SEEA1960_RS01090 PF10995 Cellulose biosynthesis GIL SEEA1960_RS01095 PF10945 Cellulose biosynthesis protein BcsR SEEA1960_RS01100 PF06564 Cellulose biosynthesis protein BcsQ SEEA1960_RS01105 PF00535 Glycosyl transferase family 2 SEEA1960_RS01105 PF07238 PilZ domain SEEA1960_RS01110 PF03170 Bacterial cellulose synthase subunit SEEA1960_RS01115 PF01270 Glycosyl hydrolases family 8 SEEA1960_RS01120 PF13176 Tetratricopeptide repeat SEEA1960_RS01120 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SEEA1960_RS01130 PF00563 EAL domain SEEA1960_RS01130 PF17154 Gammaproteobacterial periplasmic sensor domain SEEA1960_RS01130 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS01130 PF00672 HAMP domain SEEA1960_RS01135 PF00375 Sodium:dicarboxylate symporter family SEEA1960_RS01140 PF05193 Peptidase M16 inactive domain SEEA1960_RS01140 PF00675 Insulinase (Peptidase family M16) SEEA1960_RS01145 PF00294 pfkB family carbohydrate kinase SEEA1960_RS01150 PF00563 EAL domain SEEA1960_RS01155 PF05170 AsmA family SEEA1960_RS01160 PF00083 Sugar (and other) transporter SEEA1960_RS01160 PF07690 Major Facilitator Superfamily SEEA1960_RS01165 PF03631 Virulence factor BrkB SEEA1960_RS01170 PF03466 LysR substrate binding domain SEEA1960_RS01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS01175 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS01190 PF01204 Trehalase SEEA1960_RS01195 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS01195 PF07702 UTRA domain SEEA1960_RS01200 PF01380 SIS domain SEEA1960_RS01205 PF00294 pfkB family carbohydrate kinase SEEA1960_RS01210 PF03605 Anaerobic c4-dicarboxylate membrane transporter SEEA1960_RS01215 PF17763 Glutaminase/Asparaginase C-terminal domain SEEA1960_RS01215 PF00710 Asparaginase, N-terminal SEEA1960_RS01220 PF00294 pfkB family carbohydrate kinase SEEA1960_RS01225 PF01418 Helix-turn-helix domain, rpiR family SEEA1960_RS01225 PF01380 SIS domain SEEA1960_RS01230 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS01235 PF07690 Major Facilitator Superfamily SEEA1960_RS01240 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS01240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEA1960_RS01245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SEEA1960_RS01260 PF01432 Peptidase family M3 SEEA1960_RS01265 PF04445 Putative SAM-dependent methyltransferase SEEA1960_RS01270 PF00854 POT family SEEA1960_RS01275 PF00582 Universal stress protein family SEEA1960_RS01280 PF10625 Universal stress protein B (UspB) SEEA1960_RS01285 PF01384 Phosphate transporter family SEEA1960_RS01295 PF13533 Biotin-lipoyl like SEEA1960_RS01300 PF00005 ABC transporter SEEA1960_RS01310 PF08753 NikR C terminal nickel binding domain SEEA1960_RS01310 PF01402 Ribbon-helix-helix protein, copG family SEEA1960_RS01315 PF01648 4'-phosphopantetheinyl transferase superfamily SEEA1960_RS01320 PF01594 AI-2E family transporter SEEA1960_RS01325 PF07690 Major Facilitator Superfamily SEEA1960_RS01330 PF08786 DcrB SEEA1960_RS01335 PF02592 Putative vitamin uptake transporter SEEA1960_RS01340 PF01206 Sulfurtransferase TusA SEEA1960_RS01345 PF02203 Tar ligand binding domain homologue SEEA1960_RS01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS01345 PF00672 HAMP domain SEEA1960_RS01350 PF00403 Heavy-metal-associated domain SEEA1960_RS01355 PF07947 YhhN family SEEA1960_RS01360 PF10694 Protein of unknown function (DUF2500) SEEA1960_RS01365 PF06611 Protein of unknown function (DUF1145) SEEA1960_RS01375 PF00448 SRP54-type protein, GTPase domain SEEA1960_RS01375 PF02881 SRP54-type protein, helical bundle domain SEEA1960_RS01380 PF00005 ABC transporter SEEA1960_RS01385 PF18075 FtsX extracellular domain SEEA1960_RS01385 PF02687 FtsX-like permease family SEEA1960_RS01390 PF04545 Sigma-70, region 4 SEEA1960_RS01390 PF04542 Sigma-70 region 2 SEEA1960_RS01395 PF13458 Periplasmic binding protein SEEA1960_RS01400 PF12568 Acetyltransferase (GNAT) domain, PanZ SEEA1960_RS01405 PF13458 Periplasmic binding protein SEEA1960_RS01410 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS01415 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS01415 PF11862 Domain of unknown function (DUF3382) SEEA1960_RS01420 PF12399 Branched-chain amino acid ATP-binding cassette transporter SEEA1960_RS01420 PF00005 ABC transporter SEEA1960_RS01425 PF00005 ABC transporter SEEA1960_RS01435 PF13416 Bacterial extracellular solute-binding protein SEEA1960_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS01450 PF00005 ABC transporter SEEA1960_RS01450 PF17912 MalK OB fold domain SEEA1960_RS01455 PF03009 Glycerophosphoryl diester phosphodiesterase family SEEA1960_RS01460 PF10956 Protein of unknown function (DUF2756) SEEA1960_RS01470 PF02126 Phosphotriesterase family SEEA1960_RS01485 PF00294 pfkB family carbohydrate kinase SEEA1960_RS01490 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS01495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS01495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEA1960_RS01500 PF02678 Pirin SEEA1960_RS01500 PF17954 Quercetinase C-terminal cupin domain SEEA1960_RS01505 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS01505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEA1960_RS01510 PF01202 Shikimate kinase SEEA1960_RS01515 PF02447 GntP family permease SEEA1960_RS01520 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEA1960_RS01520 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEA1960_RS01525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEA1960_RS01525 PF02806 Alpha amylase, C-terminal all-beta domain SEEA1960_RS01525 PF00128 Alpha amylase, catalytic domain SEEA1960_RS01530 PF18390 Glycogen debranching enzyme C-terminal domain SEEA1960_RS01530 PF00128 Alpha amylase, catalytic domain SEEA1960_RS01530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEA1960_RS01535 PF00483 Nucleotidyl transferase SEEA1960_RS01540 PF08323 Starch synthase catalytic domain SEEA1960_RS01540 PF00534 Glycosyl transferases group 1 SEEA1960_RS01545 PF00343 Carbohydrate phosphorylase SEEA1960_RS01550 PF09339 IclR helix-turn-helix domain SEEA1960_RS01550 PF01614 Bacterial transcriptional regulator SEEA1960_RS01555 PF00701 Dihydrodipicolinate synthetase family SEEA1960_RS01560 PF00920 Dehydratase family SEEA1960_RS01565 PF07690 Major Facilitator Superfamily SEEA1960_RS01570 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS01585 PF01266 FAD dependent oxidoreductase SEEA1960_RS01585 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SEEA1960_RS01590 PF00581 Rhodanese-like domain SEEA1960_RS01595 PF01694 Rhomboid family SEEA1960_RS01595 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SEEA1960_RS01600 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS01600 PF00455 DeoR C terminal sensor domain SEEA1960_RS01605 PF06956 Regulator of RNA terminal phosphate cyclase SEEA1960_RS01605 PF00158 Sigma-54 interaction domain SEEA1960_RS01615 PF01139 tRNA-splicing ligase RtcB SEEA1960_RS01620 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain SEEA1960_RS01620 PF01137 RNA 3'-terminal phosphate cyclase SEEA1960_RS01630 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS01630 PF17874 MalT-like TPR region SEEA1960_RS01635 PF00343 Carbohydrate phosphorylase SEEA1960_RS01640 PF02446 4-alpha-glucanotransferase SEEA1960_RS01645 PF02447 GntP family permease SEEA1960_RS01650 PF01106 NifU-like domain SEEA1960_RS01650 PF01521 Iron-sulphur cluster biosynthesis SEEA1960_RS01655 PF00156 Phosphoribosyl transferase domain SEEA1960_RS01660 PF00561 alpha/beta hydrolase fold SEEA1960_RS01665 PF04754 Putative transposase, YhgA-like SEEA1960_RS01670 PF09012 FeoC like transcriptional regulator SEEA1960_RS01675 PF07664 Ferrous iron transport protein B C terminus SEEA1960_RS01675 PF17910 FeoB cytosolic helical domain SEEA1960_RS01675 PF02421 Ferrous iron transport protein B SEEA1960_RS01675 PF07670 Nucleoside recognition SEEA1960_RS01680 PF04023 FeoA domain SEEA1960_RS01690 PF00575 S1 RNA binding domain SEEA1960_RS01690 PF17674 HHH domain SEEA1960_RS01690 PF09371 Tex-like protein N-terminal domain SEEA1960_RS01690 PF16921 Tex protein YqgF-like domain SEEA1960_RS01695 PF03449 Transcription elongation factor, N-terminal SEEA1960_RS01695 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEA1960_RS01700 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS01700 PF00072 Response regulator receiver domain SEEA1960_RS01705 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS01705 PF00672 HAMP domain SEEA1960_RS01710 PF01293 Phosphoenolpyruvate carboxykinase SEEA1960_RS01715 PF13687 Domain of unknown function (DUF4153) SEEA1960_RS01720 PF01430 Hsp33 protein SEEA1960_RS01725 PF01479 S4 domain SEEA1960_RS01730 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS01735 PF07095 Intracellular growth attenuator protein IgaA SEEA1960_RS01740 PF00293 NUDIX domain SEEA1960_RS01745 PF17092 Penicillin-binding protein OB-like domain SEEA1960_RS01745 PF00912 Transglycosylase SEEA1960_RS01745 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS01755 PF05137 Fimbrial assembly protein (PilN) SEEA1960_RS01765 PF10748 DNA utilization proteins HofP SEEA1960_RS01770 PF00263 Bacterial type II and III secretion system protein SEEA1960_RS01770 PF03958 Bacterial type II/III secretion system short domain SEEA1960_RS01780 PF01202 Shikimate kinase SEEA1960_RS01785 PF01761 3-dehydroquinate synthase SEEA1960_RS01790 PF05036 Sporulation related domain SEEA1960_RS01795 PF02086 D12 class N6 adenine-specific DNA methyltransferase SEEA1960_RS01800 PF00834 Ribulose-phosphate 3 epimerase family SEEA1960_RS01805 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS01810 PF00579 tRNA synthetases class I (W and Y) SEEA1960_RS01815 PF13978 Protein of unknown function (DUF4223) SEEA1960_RS01825 PF10414 Sirohaem synthase dimerisation region SEEA1960_RS01825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS01825 PF14824 Sirohaem biosynthesis protein central SEEA1960_RS01830 PF01226 Formate/nitrite transporter SEEA1960_RS01835 PF13806 Rieske-like [2Fe-2S] domain SEEA1960_RS01840 PF04324 BFD-like [2Fe-2S] binding domain SEEA1960_RS01840 PF18267 Rubredoxin NAD+ reductase C-terminal domain SEEA1960_RS01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS01840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEA1960_RS01840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEA1960_RS01845 PF07690 Major Facilitator Superfamily SEEA1960_RS01850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SEEA1960_RS01855 PF10832 Protein of unknown function (DUF2559) SEEA1960_RS01860 PF02661 Fic/DOC family SEEA1960_RS01865 PF00117 Glutamine amidotransferase class-I SEEA1960_RS01870 PF00202 Aminotransferase class-III SEEA1960_RS01875 PF12805 FUSC-like inner membrane protein yccS SEEA1960_RS01880 PF13545 Crp-like helix-turn-helix domain SEEA1960_RS01880 PF00027 Cyclic nucleotide-binding domain SEEA1960_RS01885 PF02566 OsmC-like protein SEEA1960_RS01890 PF00485 Phosphoribulokinase / Uridine kinase family SEEA1960_RS01895 PF06794 Uncharacterised protein family (UPF0270) SEEA1960_RS01900 PF00561 alpha/beta hydrolase fold SEEA1960_RS01905 PF08803 Putative mono-oxygenase ydhR SEEA1960_RS01910 PF03466 LysR substrate binding domain SEEA1960_RS01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS01915 PF12848 ABC transporter SEEA1960_RS01915 PF00005 ABC transporter SEEA1960_RS01920 PF02525 Flavodoxin-like fold SEEA1960_RS01925 PF00999 Sodium/hydrogen exchanger family SEEA1960_RS01925 PF02254 TrkA-N domain SEEA1960_RS01930 PF09526 Probable metal-binding protein (DUF2387) SEEA1960_RS01935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEA1960_RS01940 PF04102 SlyX SEEA1960_RS01945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEA1960_RS01945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SEEA1960_RS01950 PF13309 HTH domain SEEA1960_RS01950 PF08348 YheO-like PAS domain SEEA1960_RS01955 PF02635 DsrE/DsrF-like family SEEA1960_RS01960 PF02635 DsrE/DsrF-like family SEEA1960_RS01965 PF04077 DsrH like protein SEEA1960_RS01970 PF00164 Ribosomal protein S12/S23 SEEA1960_RS01975 PF00177 Ribosomal protein S7p/S5e SEEA1960_RS01980 PF14492 Elongation Factor G, domain II SEEA1960_RS01980 PF03144 Elongation factor Tu domain 2 SEEA1960_RS01980 PF03764 Elongation factor G, domain IV SEEA1960_RS01980 PF00679 Elongation factor G C-terminus SEEA1960_RS01980 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS01985 PF03143 Elongation factor Tu C-terminal domain SEEA1960_RS01985 PF03144 Elongation factor Tu domain 2 SEEA1960_RS01985 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS02000 PF04324 BFD-like [2Fe-2S] binding domain SEEA1960_RS02005 PF00210 Ferritin-like domain SEEA1960_RS02010 PF01478 Type IV leader peptidase family SEEA1960_RS02020 PF00338 Ribosomal protein S10p/S20e SEEA1960_RS02025 PF00297 Ribosomal protein L3 SEEA1960_RS02030 PF00573 Ribosomal protein L4/L1 family SEEA1960_RS02035 PF00276 Ribosomal protein L23 SEEA1960_RS02040 PF00181 Ribosomal Proteins L2, RNA binding domain SEEA1960_RS02040 PF03947 Ribosomal Proteins L2, C-terminal domain SEEA1960_RS02045 PF00203 Ribosomal protein S19 SEEA1960_RS02050 PF00237 Ribosomal protein L22p/L17e SEEA1960_RS02055 PF00189 Ribosomal protein S3, C-terminal domain SEEA1960_RS02055 PF07650 KH domain SEEA1960_RS02060 PF00252 Ribosomal protein L16p/L10e SEEA1960_RS02065 PF00831 Ribosomal L29 protein SEEA1960_RS02070 PF00366 Ribosomal protein S17 SEEA1960_RS02075 PF00238 Ribosomal protein L14p/L23e SEEA1960_RS02080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SEEA1960_RS02080 PF00467 KOW motif SEEA1960_RS02085 PF00281 Ribosomal protein L5 SEEA1960_RS02085 PF00673 ribosomal L5P family C-terminus SEEA1960_RS02090 PF00253 Ribosomal protein S14p/S29e SEEA1960_RS02095 PF00410 Ribosomal protein S8 SEEA1960_RS02100 PF00347 Ribosomal protein L6 SEEA1960_RS02105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SEEA1960_RS02110 PF03719 Ribosomal protein S5, C-terminal domain SEEA1960_RS02110 PF00333 Ribosomal protein S5, N-terminal domain SEEA1960_RS02115 PF00327 Ribosomal protein L30p/L7e SEEA1960_RS02120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SEEA1960_RS02125 PF00344 SecY translocase SEEA1960_RS02130 PF00444 Ribosomal protein L36 SEEA1960_RS02135 PF00416 Ribosomal protein S13/S18 SEEA1960_RS02140 PF00411 Ribosomal protein S11 SEEA1960_RS02145 PF01479 S4 domain SEEA1960_RS02145 PF00163 Ribosomal protein S4/S9 N-terminal domain SEEA1960_RS02150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SEEA1960_RS02150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SEEA1960_RS02150 PF01000 RNA polymerase Rpb3/RpoA insert domain SEEA1960_RS02155 PF01196 Ribosomal protein L17 SEEA1960_RS02160 PF09350 Domain of unknown function (DUF1992) SEEA1960_RS02165 PF13411 MerR HTH family regulatory protein SEEA1960_RS02170 PF03889 Alternative ribosome-rescue factor A SEEA1960_RS02175 PF01741 Large-conductance mechanosensitive channel, MscL SEEA1960_RS02180 PF02254 TrkA-N domain SEEA1960_RS02180 PF02080 TrkA-C domain SEEA1960_RS02185 PF01189 16S rRNA methyltransferase RsmB/F SEEA1960_RS02185 PF01029 NusB family SEEA1960_RS02190 PF02911 Formyl transferase, C-terminal domain SEEA1960_RS02190 PF00551 Formyl transferase SEEA1960_RS02195 PF01327 Polypeptide deformylase SEEA1960_RS02200 PF17782 DprA winged helix domain SEEA1960_RS02200 PF02481 DNA recombination-mediator protein A SEEA1960_RS02205 PF04361 Protein of unknown function (DUF494) SEEA1960_RS02210 PF01396 Topoisomerase DNA binding C4 zinc finger SEEA1960_RS02215 PF01300 Telomere recombination SEEA1960_RS02220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SEEA1960_RS02220 PF01488 Shikimate / quinate 5-dehydrogenase SEEA1960_RS02220 PF08501 Shikimate dehydrogenase substrate binding domain SEEA1960_RS02225 PF07369 Protein of unknown function (DUF1488) SEEA1960_RS02230 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS02285 PF00529 HlyD membrane-fusion protein of T1SS SEEA1960_RS02285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS02290 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS02290 PF08361 MAATS-type transcriptional repressor, C-terminal region SEEA1960_RS02295 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS02295 PF00563 EAL domain SEEA1960_RS02295 PF03707 Bacterial signalling protein N terminal repeat SEEA1960_RS02300 PF10831 Protein of unknown function (DUF2556) SEEA1960_RS02305 PF01555 DNA methylase SEEA1960_RS02310 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS02315 PF01207 Dihydrouridine synthase (Dus) SEEA1960_RS02325 PF00474 Sodium:solute symporter family SEEA1960_RS02330 PF06196 Protein of unknown function (DUF997) SEEA1960_RS02335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SEEA1960_RS02335 PF00289 Biotin carboxylase, N-terminal domain SEEA1960_RS02335 PF02785 Biotin carboxylase C-terminal domain SEEA1960_RS02340 PF00364 Biotin-requiring enzyme SEEA1960_RS02345 PF01794 Ferric reductase like transmembrane component SEEA1960_RS02350 PF00174 Oxidoreductase molybdopterin binding domain SEEA1960_RS02355 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS02355 PF00107 Zinc-binding dehydrogenase SEEA1960_RS02360 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS02360 PF17157 Gammaproteobacterial periplasmic sensor domain SEEA1960_RS02360 PF00563 EAL domain SEEA1960_RS02380 PF04085 rod shape-determining protein MreC SEEA1960_RS02385 PF04093 rod shape-determining protein MreD SEEA1960_RS02390 PF02545 Maf-like protein SEEA1960_RS02395 PF00575 S1 RNA binding domain SEEA1960_RS02395 PF10150 Ribonuclease E/G family SEEA1960_RS02400 PF13502 AsmA-like C-terminal region SEEA1960_RS02400 PF13116 Protein of unknown function SEEA1960_RS02405 PF01523 Putative modulator of DNA gyrase SEEA1960_RS02410 PF03466 LysR substrate binding domain SEEA1960_RS02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS02415 PF07869 Protein of unknown function (DUF1656) SEEA1960_RS02420 PF13533 Biotin-lipoyl like SEEA1960_RS02425 PF04632 Fusaric acid resistance protein family SEEA1960_RS02430 PF01337 Barstar (barnase inhibitor) SEEA1960_RS02435 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS02440 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS02445 PF02863 Arginine repressor, C-terminal domain SEEA1960_RS02445 PF01316 Arginine repressor, DNA binding domain SEEA1960_RS02450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SEEA1960_RS02450 PF00056 lactate/malate dehydrogenase, NAD binding domain SEEA1960_RS02455 PF07702 UTRA domain SEEA1960_RS02455 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS02465 PF00939 Sodium:sulfate symporter transmembrane region SEEA1960_RS02470 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS02475 PF05683 Fumarase C-terminus SEEA1960_RS02480 PF04277 Oxaloacetate decarboxylase, gamma chain SEEA1960_RS02485 PF02436 Conserved carboxylase domain SEEA1960_RS02485 PF00682 HMGL-like SEEA1960_RS02485 PF00364 Biotin-requiring enzyme SEEA1960_RS02490 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SEEA1960_RS02495 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEA1960_RS02500 PF13180 PDZ domain SEEA1960_RS02505 PF00595 PDZ domain SEEA1960_RS02505 PF13180 PDZ domain SEEA1960_RS02510 PF06295 Protein of unknown function (DUF1043) SEEA1960_RS02515 PF03969 AFG1-like ATPase SEEA1960_RS02520 PF00572 Ribosomal protein L13 SEEA1960_RS02525 PF00380 Ribosomal protein S9/S16 SEEA1960_RS02535 PF00043 Glutathione S-transferase, C-terminal domain SEEA1960_RS02535 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS02540 PF04386 Stringent starvation protein B SEEA1960_RS02545 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS02545 PF07729 FCD domain SEEA1960_RS02550 PF00701 Dihydrodipicolinate synthetase family SEEA1960_RS02555 PF07690 Major Facilitator Superfamily SEEA1960_RS02560 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SEEA1960_RS02565 PF00480 ROK family SEEA1960_RS02570 PF04074 YhcH/YjgK/YiaL SEEA1960_RS02575 PF07969 Amidohydrolase family SEEA1960_RS02580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SEEA1960_RS02585 PF17761 DUF1016 N-terminal domain SEEA1960_RS02585 PF06250 YhcG PDDEXK nuclease domain SEEA1960_RS02590 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS02590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEA1960_RS02595 PF01493 GXGXG motif SEEA1960_RS02595 PF01645 Conserved region in glutamate synthase SEEA1960_RS02595 PF04898 Glutamate synthase central domain SEEA1960_RS02595 PF00310 Glutamine amidotransferases class-II SEEA1960_RS02610 PF04055 Radical SAM superfamily SEEA1960_RS02610 PF16199 Radical_SAM C-terminal domain SEEA1960_RS02615 PF01627 Hpt domain SEEA1960_RS02615 PF00989 PAS fold SEEA1960_RS02615 PF18415 Histidine kinase receptor ArcB trans-membrane domain SEEA1960_RS02615 PF00072 Response regulator receiver domain SEEA1960_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS02615 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS02625 PF00912 Transglycosylase SEEA1960_RS02630 PF10707 PhoP regulatory network protein YrbL SEEA1960_RS02640 PF00381 PTS HPr component phosphorylation site SEEA1960_RS02645 PF03668 P-loop ATPase protein family SEEA1960_RS02650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS02655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SEEA1960_RS02660 PF00309 Sigma-54 factor, Activator interacting domain (AID) SEEA1960_RS02660 PF04963 Sigma-54 factor, core binding domain SEEA1960_RS02660 PF04552 Sigma-54, DNA binding domain SEEA1960_RS02665 PF12399 Branched-chain amino acid ATP-binding cassette transporter SEEA1960_RS02665 PF00005 ABC transporter SEEA1960_RS02670 PF03968 OstA-like protein SEEA1960_RS02675 PF06835 Lipopolysaccharide-assembly, LptC-related SEEA1960_RS02685 PF01380 SIS domain SEEA1960_RS02685 PF00571 CBS domain SEEA1960_RS02690 PF01699 Sodium/calcium exchanger protein SEEA1960_RS02695 PF00005 ABC transporter SEEA1960_RS02700 PF02405 Permease MlaE SEEA1960_RS02705 PF02470 MlaD protein SEEA1960_RS02710 PF05494 MlaC protein SEEA1960_RS02715 PF13466 STAS domain SEEA1960_RS02720 PF01722 BolA-like protein SEEA1960_RS02725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SEEA1960_RS02730 PF13693 Winged helix-turn-helix DNA-binding SEEA1960_RS02735 PF00348 Polyprenyl synthetase SEEA1960_RS02740 PF00829 Ribosomal prokaryotic L21 protein SEEA1960_RS02745 PF01016 Ribosomal L27 protein SEEA1960_RS02750 PF00892 EamA-like transporter family SEEA1960_RS02755 PF01018 GTP1/OBG SEEA1960_RS02755 PF01926 50S ribosome-binding GTPase SEEA1960_RS02760 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SEEA1960_RS02765 PF03449 Transcription elongation factor, N-terminal SEEA1960_RS02765 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEA1960_RS02770 PF01985 CRS1 / YhbY (CRM) domain SEEA1960_RS02775 PF01728 FtsJ-like methyltransferase SEEA1960_RS02785 PF01434 Peptidase family M41 SEEA1960_RS02785 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS02785 PF06480 FtsH Extracellular SEEA1960_RS02785 PF17862 AAA+ lid domain SEEA1960_RS02790 PF00809 Pterin binding enzyme SEEA1960_RS02795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEA1960_RS02795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEA1960_RS02795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEA1960_RS02795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEA1960_RS02800 PF03840 Preprotein translocase SecG subunit SEEA1960_RS02815 PF00764 Arginosuccinate synthase SEEA1960_RS02825 PF02576 RimP N-terminal domain SEEA1960_RS02825 PF17384 RimP C-terminal SH3 domain SEEA1960_RS02830 PF13184 NusA-like KH domain SEEA1960_RS02830 PF08529 NusA N-terminal domain SEEA1960_RS02835 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS02835 PF04760 Translation initiation factor IF-2, N-terminal region SEEA1960_RS02835 PF08364 Bacterial translation initiation factor IF-2 associated region SEEA1960_RS02835 PF11987 Translation-initiation factor 2 SEEA1960_RS02840 PF02033 Ribosome-binding factor A SEEA1960_RS02845 PF09157 Pseudouridine synthase II TruB, C-terminal SEEA1960_RS02845 PF16198 tRNA pseudouridylate synthase B C-terminal domain SEEA1960_RS02845 PF01509 TruB family pseudouridylate synthase (N terminal domain) SEEA1960_RS02850 PF00312 Ribosomal protein S15 SEEA1960_RS02855 PF03725 3' exoribonuclease family, domain 2 SEEA1960_RS02855 PF00013 KH domain SEEA1960_RS02855 PF01138 3' exoribonuclease family, domain 1 SEEA1960_RS02855 PF00575 S1 RNA binding domain SEEA1960_RS02855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SEEA1960_RS02860 PF13181 Tetratricopeptide repeat SEEA1960_RS02860 PF07719 Tetratricopeptide repeat SEEA1960_RS02865 PF00271 Helicase conserved C-terminal domain SEEA1960_RS02865 PF03880 DbpA RNA binding domain SEEA1960_RS02865 PF00270 DEAD/DEAH box helicase SEEA1960_RS02865 PF12343 Cold shock protein DEAD box A SEEA1960_RS02870 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS02875 PF00296 Luciferase-like monooxygenase SEEA1960_RS02880 PF01136 Peptidase family U32 SEEA1960_RS02885 PF01136 Peptidase family U32 SEEA1960_RS02890 PF02036 SCP-2 sterol transfer family SEEA1960_RS02900 PF01541 GIY-YIG catalytic domain SEEA1960_RS02910 PF01965 DJ-1/PfpI family SEEA1960_RS02915 PF13460 NAD(P)H-binding SEEA1960_RS02920 PF04972 BON domain SEEA1960_RS02925 PF13580 SIS domain SEEA1960_RS02930 PF02021 Uncharacterised protein family UPF0102 SEEA1960_RS02935 PF04348 LppC putative lipoprotein SEEA1960_RS02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS02945 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS02950 PF00107 Zinc-binding dehydrogenase SEEA1960_RS02950 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS02955 PF03611 PTS system sugar-specific permease component SEEA1960_RS02960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS02965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS02970 PF08013 Tagatose 6 phosphate kinase SEEA1960_RS02975 PF01116 Fructose-bisphosphate aldolase class-II SEEA1960_RS02985 PF08666 SAF domain SEEA1960_RS02985 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SEEA1960_RS02990 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEA1960_RS02995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEA1960_RS02995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEA1960_RS03000 PF02595 Glycerate kinase family SEEA1960_RS03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS03025 PF03466 LysR substrate binding domain SEEA1960_RS03030 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS03035 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS03040 PF00871 Acetokinase family SEEA1960_RS03045 PF01228 Glycine radical SEEA1960_RS03045 PF02901 Pyruvate formate lyase-like SEEA1960_RS03050 PF03315 Serine dehydratase beta chain SEEA1960_RS03050 PF03313 Serine dehydratase alpha chain SEEA1960_RS03060 PF03313 Serine dehydratase alpha chain SEEA1960_RS03070 PF02678 Pirin SEEA1960_RS03070 PF17954 Quercetinase C-terminal cupin domain SEEA1960_RS03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS03075 PF03466 LysR substrate binding domain SEEA1960_RS03080 PF05656 Protein of unknown function (DUF805) SEEA1960_RS03085 PF13409 Glutathione S-transferase, N-terminal domain SEEA1960_RS03090 PF07681 DoxX SEEA1960_RS03095 PF13997 YqjK-like protein SEEA1960_RS03100 PF07332 Putative Actinobacterial Holin-X, holin superfamily III SEEA1960_RS03105 PF05957 Bacterial protein of unknown function (DUF883) SEEA1960_RS03110 PF06476 Protein of unknown function (DUF1090) SEEA1960_RS03115 PF13721 SecD export protein N-terminal TM region SEEA1960_RS03120 PF09335 SNARE associated Golgi protein SEEA1960_RS03125 PF00375 Sodium:dicarboxylate symporter family SEEA1960_RS03130 PF03741 Integral membrane protein TerC family SEEA1960_RS03135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS03140 PF02698 DUF218 domain SEEA1960_RS03145 PF01863 Protein of unknown function DUF45 SEEA1960_RS03150 PF05175 Methyltransferase small domain SEEA1960_RS03155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SEEA1960_RS03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS03160 PF00202 Aminotransferase class-III SEEA1960_RS03170 PF08447 PAS fold SEEA1960_RS03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS03175 PF02203 Tar ligand binding domain homologue SEEA1960_RS03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS03175 PF00672 HAMP domain SEEA1960_RS03180 PF03551 Transcriptional regulator PadR-like family SEEA1960_RS03185 PF08021 Siderophore-interacting FAD-binding domain SEEA1960_RS03185 PF04954 Siderophore-interacting protein SEEA1960_RS03195 PF03167 Uracil DNA glycosylase superfamily SEEA1960_RS03200 PF04546 Sigma-70, non-essential region SEEA1960_RS03200 PF00140 Sigma-70 factor, region 1.2 SEEA1960_RS03200 PF04542 Sigma-70 region 2 SEEA1960_RS03200 PF03979 Sigma-70 factor, region 1.1 SEEA1960_RS03200 PF04545 Sigma-70, region 4 SEEA1960_RS03200 PF04539 Sigma-70 region 3 SEEA1960_RS03205 PF08278 DNA primase DnaG DnaB-binding SEEA1960_RS03205 PF08275 DNA primase catalytic core, N-terminal domain SEEA1960_RS03205 PF01807 CHC2 zinc finger SEEA1960_RS03205 PF10410 DnaB-helicase binding domain of primase SEEA1960_RS03210 PF01165 Ribosomal protein S21 SEEA1960_RS03220 PF00814 Glycoprotease family SEEA1960_RS03225 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS03230 PF02660 Glycerol-3-phosphate acyltransferase SEEA1960_RS03235 PF02152 Dihydroneopterin aldolase SEEA1960_RS03240 PF02673 Bacitracin resistance protein BacA SEEA1960_RS03245 PF01743 Poly A polymerase head domain SEEA1960_RS03245 PF01966 HD domain SEEA1960_RS03245 PF12627 Probable RNA and SrmB- binding site of polymerase A SEEA1960_RS03250 PF08239 Bacterial SH3 domain SEEA1960_RS03255 PF01928 CYTH domain SEEA1960_RS03260 PF03710 Glutamate-ammonia ligase adenylyltransferase SEEA1960_RS03260 PF08335 GlnD PII-uridylyltransferase SEEA1960_RS03265 PF01467 Cytidylyltransferase-like SEEA1960_RS03265 PF00294 pfkB family carbohydrate kinase SEEA1960_RS03275 PF15975 Flotillin SEEA1960_RS03275 PF01145 SPFH domain / Band 7 family SEEA1960_RS03280 PF07290 Protein of unknown function (DUF1449) SEEA1960_RS03285 PF08971 Glycogen synthesis protein SEEA1960_RS03290 PF04380 Membrane fusogenic activity SEEA1960_RS03295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SEEA1960_RS03300 PF02600 Disulfide bond formation protein DsbB SEEA1960_RS03305 PF01323 DSBA-like thioredoxin domain SEEA1960_RS03310 PF17425 Arylsulfotransferase Ig-like domain SEEA1960_RS03310 PF05935 Arylsulfotransferase (ASST) SEEA1960_RS03320 PF02535 ZIP Zinc transporter SEEA1960_RS03325 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SEEA1960_RS03330 PF03738 Glutathionylspermidine synthase preATP-grasp SEEA1960_RS03335 PF06693 Protein of unknown function (DUF1190) SEEA1960_RS03345 PF02321 Outer membrane efflux protein SEEA1960_RS03350 PF00293 NUDIX domain SEEA1960_RS03355 PF06853 Protein of unknown function (DUF1249) SEEA1960_RS03360 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS03365 PF05728 Uncharacterised protein family (UPF0227) SEEA1960_RS03370 PF01751 Toprim domain SEEA1960_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS03370 PF00986 DNA gyrase B subunit, carboxyl terminus SEEA1960_RS03370 PF00204 DNA gyrase B SEEA1960_RS03375 PF03992 Antibiotic biosynthesis monooxygenase SEEA1960_RS03380 PF02525 Flavodoxin-like fold SEEA1960_RS03385 PF08521 Two-component sensor kinase N-terminal SEEA1960_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS03385 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS03390 PF00072 Response regulator receiver domain SEEA1960_RS03390 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS03395 PF04076 Bacterial OB fold (BOF) protein SEEA1960_RS03400 PF06445 GyrI-like small molecule binding domain SEEA1960_RS03405 PF00521 DNA gyrase/topoisomerase IV, subunit A SEEA1960_RS03405 PF03989 DNA gyrase C-terminal domain, beta-propeller SEEA1960_RS03410 PF01553 Acyltransferase SEEA1960_RS03415 PF07731 Multicopper oxidase SEEA1960_RS03415 PF00394 Multicopper oxidase SEEA1960_RS03415 PF07732 Multicopper oxidase SEEA1960_RS03420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SEEA1960_RS03430 PF03480 Bacterial extracellular solute-binding protein, family 7 SEEA1960_RS03435 PF11842 Domain of unknown function (DUF3362) SEEA1960_RS03435 PF04055 Radical SAM superfamily SEEA1960_RS03435 PF08497 Radical SAM N-terminal SEEA1960_RS03450 PF00939 Sodium:sulfate symporter transmembrane region SEEA1960_RS03455 PF00248 Aldo/keto reductase family SEEA1960_RS03460 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS03465 PF06719 AraC-type transcriptional regulator N-terminus SEEA1960_RS03465 PF12833 Helix-turn-helix domain SEEA1960_RS03470 PF09335 SNARE associated Golgi protein SEEA1960_RS03475 PF01053 Cys/Met metabolism PLP-dependent enzyme SEEA1960_RS03480 PF01618 MotA/TolQ/ExbB proton channel family SEEA1960_RS03485 PF02472 Biopolymer transport protein ExbD/TolR SEEA1960_RS03510 PF03350 Uncharacterized protein family, UPF0114 SEEA1960_RS03515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS03515 PF00672 HAMP domain SEEA1960_RS03515 PF02203 Tar ligand binding domain homologue SEEA1960_RS03520 PF11115 Protein of unknown function (DUF2623) SEEA1960_RS03530 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEA1960_RS03530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEA1960_RS03535 PF13247 4Fe-4S dicluster domain SEEA1960_RS03540 PF03916 Polysulphide reductase, NrfD SEEA1960_RS03545 PF00374 Nickel-dependent hydrogenase SEEA1960_RS03550 PF01750 Hydrogenase maturation protease SEEA1960_RS03555 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE SEEA1960_RS03560 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEA1960_RS03565 PF01455 HupF/HypC family SEEA1960_RS03570 PF01497 Periplasmic binding protein SEEA1960_RS03580 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS03585 PF05257 CHAP domain SEEA1960_RS03585 PF03738 Glutathionylspermidine synthase preATP-grasp SEEA1960_RS03595 PF02614 Glucuronate isomerase SEEA1960_RS03600 PF08125 Mannitol dehydrogenase C-terminal domain SEEA1960_RS03600 PF01232 Mannitol dehydrogenase Rossmann domain SEEA1960_RS03605 PF03786 D-mannonate dehydratase (UxuA) SEEA1960_RS03610 PF07690 Major Facilitator Superfamily SEEA1960_RS03620 PF01522 Polysaccharide deacetylase SEEA1960_RS03630 PF04965 Gene 25-like lysozyme SEEA1960_RS03635 PF00171 Aldehyde dehydrogenase family SEEA1960_RS03640 PF01266 FAD dependent oxidoreductase SEEA1960_RS03650 PF13520 Amino acid permease SEEA1960_RS03660 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS03710 PF01320 Colicin immunity protein / pyocin immunity protein SEEA1960_RS03715 PF01320 Colicin immunity protein / pyocin immunity protein SEEA1960_RS03785 PF13737 Transposase DDE domain SEEA1960_RS03790 PF00970 Oxidoreductase FAD-binding domain SEEA1960_RS03790 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS03790 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS03795 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS03800 PF02525 Flavodoxin-like fold SEEA1960_RS03805 PF03466 LysR substrate binding domain SEEA1960_RS03820 PF04474 Protein of unknown function (DUF554) SEEA1960_RS03830 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEA1960_RS03830 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEA1960_RS03830 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEA1960_RS03835 PF03825 Nucleoside H+ symporter SEEA1960_RS03840 PF01464 Transglycosylase SLT domain SEEA1960_RS03840 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SEEA1960_RS03845 PF04362 Bacterial Fe(2+) trafficking SEEA1960_RS03850 PF00633 Helix-hairpin-helix motif SEEA1960_RS03850 PF14815 NUDIX domain SEEA1960_RS03850 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEA1960_RS03860 PF02390 Putative methyltransferase SEEA1960_RS03865 PF04320 Protein with unknown function (DUF469) SEEA1960_RS03870 PF11101 Protein of unknown function (DUF2884) SEEA1960_RS03875 PF00710 Asparaginase, N-terminal SEEA1960_RS03875 PF17763 Glutaminase/Asparaginase C-terminal domain SEEA1960_RS03880 PF06717 Protein of unknown function (DUF1202) SEEA1960_RS03885 PF04055 Radical SAM superfamily SEEA1960_RS03885 PF06969 HemN C-terminal domain SEEA1960_RS03890 PF01725 Ham1 family SEEA1960_RS03895 PF02594 Uncharacterised ACR, YggU family COG1872 SEEA1960_RS03900 PF02325 YGGT family SEEA1960_RS03905 PF01168 Alanine racemase, N-terminal domain SEEA1960_RS03910 PF00437 Type II/IV secretion system protein SEEA1960_RS03920 PF03652 Holliday junction resolvase SEEA1960_RS03925 PF02622 Uncharacterized ACR, COG1678 SEEA1960_RS03930 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SEEA1960_RS03930 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SEEA1960_RS03935 PF04452 RNA methyltransferase SEEA1960_RS03940 PF04231 Endonuclease I SEEA1960_RS03945 PF10263 SprT-like family SEEA1960_RS03945 PF17283 SprT-like zinc ribbon domain SEEA1960_RS03950 PF00083 Sugar (and other) transporter SEEA1960_RS03955 PF02773 S-adenosylmethionine synthetase, C-terminal domain SEEA1960_RS03955 PF00438 S-adenosylmethionine synthetase, N-terminal domain SEEA1960_RS03955 PF02772 S-adenosylmethionine synthetase, central domain SEEA1960_RS03970 PF17810 Arginine decarboxylase helical bundle domain SEEA1960_RS03970 PF17944 Arginine decarboxylase C-terminal helical extension SEEA1960_RS03970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEA1960_RS03980 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS03980 PF07729 FCD domain SEEA1960_RS03985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS03985 PF13378 Enolase C-terminal domain-like SEEA1960_RS03990 PF13378 Enolase C-terminal domain-like SEEA1960_RS03990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS03995 PF01232 Mannitol dehydrogenase Rossmann domain SEEA1960_RS03995 PF08125 Mannitol dehydrogenase C-terminal domain SEEA1960_RS04000 PF00107 Zinc-binding dehydrogenase SEEA1960_RS04000 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS04005 PF02615 Malate/L-lactate dehydrogenase SEEA1960_RS04010 PF04074 YhcH/YjgK/YiaL SEEA1960_RS04020 PF12697 Alpha/beta hydrolase family SEEA1960_RS04025 PF00491 Arginase family SEEA1960_RS04030 PF01435 Peptidase family M48 SEEA1960_RS04035 PF02780 Transketolase, C-terminal domain SEEA1960_RS04035 PF00456 Transketolase, thiamine diphosphate binding domain SEEA1960_RS04035 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS04040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS04045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS04045 PF02378 Phosphotransferase system, EIIC SEEA1960_RS04050 PF00107 Zinc-binding dehydrogenase SEEA1960_RS04050 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS04055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SEEA1960_RS04060 PF05068 Mannitol repressor SEEA1960_RS04070 PF00005 ABC transporter SEEA1960_RS04075 PF00005 ABC transporter SEEA1960_RS04100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SEEA1960_RS04100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SEEA1960_RS04105 PF00162 Phosphoglycerate kinase SEEA1960_RS04110 PF01116 Fructose-bisphosphate aldolase class-II SEEA1960_RS04115 PF05552 Conserved TM helix SEEA1960_RS04115 PF00924 Mechanosensitive ion channel SEEA1960_RS04120 PF01810 LysE type translocator SEEA1960_RS04125 PF04402 Protein of unknown function (DUF541) SEEA1960_RS04135 PF03466 LysR substrate binding domain SEEA1960_RS04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS04140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SEEA1960_RS04145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEA1960_RS04145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEA1960_RS04145 PF01842 ACT domain SEEA1960_RS04150 PF01812 5-formyltetrahydrofolate cyclo-ligase family SEEA1960_RS04160 PF05164 Cell division protein ZapA SEEA1960_RS04170 PF03695 Uncharacterised protein family (UPF0149) SEEA1960_RS04175 PF00557 Metallopeptidase family M24 SEEA1960_RS04175 PF05195 Aminopeptidase P, N-terminal domain SEEA1960_RS04180 PF01494 FAD binding domain SEEA1960_RS04185 PF01494 FAD binding domain SEEA1960_RS04190 PF01571 Aminomethyltransferase folate-binding domain SEEA1960_RS04190 PF08669 Glycine cleavage T-protein C-terminal barrel domain SEEA1960_RS04195 PF01597 Glycine cleavage H-protein SEEA1960_RS04200 PF02347 Glycine cleavage system P-protein SEEA1960_RS04220 PF00232 Glycosyl hydrolase family 1 SEEA1960_RS04225 PF04266 ASCH domain SEEA1960_RS04230 PF03006 Haemolysin-III related SEEA1960_RS04240 PF01571 Aminomethyltransferase folate-binding domain SEEA1960_RS04250 PF03937 Flavinator of succinate dehydrogenase SEEA1960_RS04255 PF07254 Membrane-bound toxin component of toxin-antitoxin system SEEA1960_RS04260 PF00258 Flavodoxin SEEA1960_RS04265 PF02899 Phage integrase, N-terminal SAM-like domain SEEA1960_RS04265 PF00589 Phage integrase family SEEA1960_RS04270 PF10411 Disulfide bond isomerase protein N-terminus SEEA1960_RS04270 PF13098 Thioredoxin-like domain SEEA1960_RS04275 PF01368 DHH family SEEA1960_RS04275 PF17768 RecJ OB domain SEEA1960_RS04275 PF02272 DHHA1 domain SEEA1960_RS04285 PF01336 OB-fold nucleic acid binding domain SEEA1960_RS04285 PF00152 tRNA synthetases class II (D, K and N) SEEA1960_RS04290 PF00293 NUDIX domain SEEA1960_RS04300 PF01551 Peptidase family M23 SEEA1960_RS04300 PF01476 LysM domain SEEA1960_RS04315 PF01850 PIN domain SEEA1960_RS04330 PF13505 Outer membrane protein beta-barrel domain SEEA1960_RS04345 PF13953 PapC C-terminal domain SEEA1960_RS04345 PF13954 PapC N-terminal domain SEEA1960_RS04345 PF00577 Outer membrane usher protein SEEA1960_RS04350 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS04350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS04370 PF03824 High-affinity nickel-transport protein SEEA1960_RS04375 PF02583 Metal-sensitive transcriptional repressor SEEA1960_RS04380 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS04390 PF03466 LysR substrate binding domain SEEA1960_RS04395 PF02803 Thiolase, C-terminal domain SEEA1960_RS04395 PF00108 Thiolase, N-terminal domain SEEA1960_RS04405 PF04962 KduI/IolB family SEEA1960_RS04415 PF00083 Sugar (and other) transporter SEEA1960_RS04420 PF01177 Asp/Glu/Hydantoin racemase SEEA1960_RS04425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS04425 PF03466 LysR substrate binding domain SEEA1960_RS04430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEA1960_RS04430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SEEA1960_RS04435 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS04440 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS04445 PF00501 AMP-binding enzyme SEEA1960_RS04445 PF01553 Acyltransferase SEEA1960_RS04450 PF07690 Major Facilitator Superfamily SEEA1960_RS04455 PF00248 Aldo/keto reductase family SEEA1960_RS04460 PF06004 Bacterial protein of unknown function (DUF903) SEEA1960_RS04465 PF03741 Integral membrane protein TerC family SEEA1960_RS04470 PF02976 DNA mismatch repair enzyme MutH SEEA1960_RS04475 PF00293 NUDIX domain SEEA1960_RS04480 PF01590 GAF domain SEEA1960_RS04480 PF00391 PEP-utilising enzyme, mobile domain SEEA1960_RS04480 PF02896 PEP-utilising enzyme, TIM barrel domain SEEA1960_RS04480 PF05524 PEP-utilising enzyme, N-terminal SEEA1960_RS04490 PF01790 Prolipoprotein diacylglyceryl transferase SEEA1960_RS04495 PF00303 Thymidylate synthase SEEA1960_RS04505 PF07963 Prokaryotic N-terminal methylation motif SEEA1960_RS04510 PF07963 Prokaryotic N-terminal methylation motif SEEA1960_RS04515 PF10713 Protein of unknown function (DUF2509) SEEA1960_RS04520 PF12528 Type II secretion prepilin peptidase dependent protein C SEEA1960_RS04520 PF07963 Prokaryotic N-terminal methylation motif SEEA1960_RS04525 PF17946 RecC C-terminal domain SEEA1960_RS04530 PF00675 Insulinase (Peptidase family M16) SEEA1960_RS04530 PF05193 Peptidase M16 inactive domain SEEA1960_RS04530 PF16187 Middle or third domain of peptidase_M16 SEEA1960_RS04535 PF12705 PD-(D/E)XK nuclease superfamily SEEA1960_RS04535 PF00580 UvrD/REP helicase N-terminal domain SEEA1960_RS04535 PF13361 UvrD-like helicase C-terminal domain SEEA1960_RS04540 PF13538 UvrD-like helicase C-terminal domain SEEA1960_RS04545 PF00696 Amino acid kinase family SEEA1960_RS04545 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS04550 PF01520 N-acetylmuramoyl-L-alanine amidase SEEA1960_RS04550 PF11741 AMIN domain SEEA1960_RS04565 PF06725 3D domain SEEA1960_RS04565 PF03562 MltA specific insert domain SEEA1960_RS04570 PF00899 ThiF family SEEA1960_RS04575 PF00892 EamA-like transporter family SEEA1960_RS04580 PF02657 Fe-S metabolism associated domain SEEA1960_RS04585 PF00266 Aminotransferase class-V SEEA1960_RS04590 PF06004 Bacterial protein of unknown function (DUF903) SEEA1960_RS04595 PF03466 LysR substrate binding domain SEEA1960_RS04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS04600 PF04241 Protein of unknown function (DUF423) SEEA1960_RS04605 PF18125 RlmM ferredoxin-like domain SEEA1960_RS04605 PF01728 FtsJ-like methyltransferase SEEA1960_RS04610 PF00455 DeoR C terminal sensor domain SEEA1960_RS04610 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS04615 PF05025 RbsD / FucU transport protein family SEEA1960_RS04620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS04620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS04625 PF07882 L-fucose isomerase, second N-terminal domain SEEA1960_RS04625 PF07881 L-fucose isomerase, first N-terminal domain SEEA1960_RS04625 PF02952 L-fucose isomerase, C-terminal domain SEEA1960_RS04630 PF07690 Major Facilitator Superfamily SEEA1960_RS04635 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS04640 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS04645 PF01367 5'-3' exonuclease, C-terminal SAM fold SEEA1960_RS04645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SEEA1960_RS04655 PF03315 Serine dehydratase beta chain SEEA1960_RS04655 PF03313 Serine dehydratase alpha chain SEEA1960_RS04665 PF03641 Possible lysine decarboxylase SEEA1960_RS04665 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SEEA1960_RS04665 PF11892 Domain of unknown function (DUF3412) SEEA1960_RS04670 PF14489 QueF-like protein SEEA1960_RS04670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SEEA1960_RS04675 PF07348 Syd protein (SUKH-2) SEEA1960_RS04685 PF04287 tRNA pseudouridine synthase C SEEA1960_RS04690 PF00849 RNA pseudouridylate synthase SEEA1960_RS04695 PF00258 Flavodoxin SEEA1960_RS04705 PF07690 Major Facilitator Superfamily SEEA1960_RS04710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS04710 PF13378 Enolase C-terminal domain-like SEEA1960_RS04715 PF13378 Enolase C-terminal domain-like SEEA1960_RS04720 PF02595 Glycerate kinase family SEEA1960_RS04725 PF00072 Response regulator receiver domain SEEA1960_RS04725 PF01627 Hpt domain SEEA1960_RS04725 PF00672 HAMP domain SEEA1960_RS04725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SEEA1960_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS04725 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS04730 PF05958 tRNA (Uracil-5-)-methyltransferase SEEA1960_RS04730 PF01938 TRAM domain SEEA1960_RS04735 PF02824 TGS domain SEEA1960_RS04735 PF13291 ACT domain SEEA1960_RS04735 PF04607 Region found in RelA / SpoT proteins SEEA1960_RS04760 PF00419 Fimbrial protein SEEA1960_RS04770 PF00419 Fimbrial protein SEEA1960_RS04775 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS04775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS04780 PF00577 Outer membrane usher protein SEEA1960_RS04780 PF13954 PapC N-terminal domain SEEA1960_RS04780 PF13953 PapC C-terminal domain SEEA1960_RS04785 PF00419 Fimbrial protein SEEA1960_RS04790 PF03819 MazG nucleotide pyrophosphohydrolase domain SEEA1960_RS04795 PF06418 CTP synthase N-terminus SEEA1960_RS04795 PF00117 Glutamine amidotransferase class-I SEEA1960_RS04800 PF03952 Enolase, N-terminal domain SEEA1960_RS04800 PF00113 Enolase, C-terminal TIM barrel domain SEEA1960_RS04805 PF04055 Radical SAM superfamily SEEA1960_RS04810 PF03099 Biotin/lipoate A/B protein ligase family SEEA1960_RS04810 PF12706 Beta-lactamase superfamily domain SEEA1960_RS04815 PF01242 6-pyruvoyl tetrahydropterin synthase SEEA1960_RS04825 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS04825 PF00258 Flavodoxin SEEA1960_RS04825 PF00667 FAD binding domain SEEA1960_RS04830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEA1960_RS04830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEA1960_RS04840 PF01507 Phosphoadenosine phosphosulfate reductase family SEEA1960_RS04845 PF11047 Salmonella outer protein D SEEA1960_RS04850 PF00270 DEAD/DEAH box helicase SEEA1960_RS04850 PF00271 Helicase conserved C-terminal domain SEEA1960_RS04850 PF18019 HD domain SEEA1960_RS04865 PF09344 CT1975-like protein SEEA1960_RS04870 PF09704 CRISPR-associated protein (Cas_Cas5) SEEA1960_RS04880 PF01867 CRISPR associated protein Cas1 SEEA1960_RS04885 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) SEEA1960_RS04890 PF04389 Peptidase family M28 SEEA1960_RS04895 PF01507 Phosphoadenosine phosphosulfate reductase family SEEA1960_RS04900 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS04910 PF12084 Protein of unknown function (DUF3561) SEEA1960_RS04915 PF04977 Septum formation initiator SEEA1960_RS04920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SEEA1960_RS04925 PF02542 YgbB family SEEA1960_RS04930 PF01142 tRNA pseudouridine synthase D (TruD) SEEA1960_RS04935 PF01975 Survival protein SurE SEEA1960_RS04945 PF01476 LysM domain SEEA1960_RS04945 PF01551 Peptidase family M23 SEEA1960_RS04960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SEEA1960_RS04965 PF02441 Flavoprotein SEEA1960_RS04970 PF01047 MarR family SEEA1960_RS04975 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS04975 PF00455 DeoR C terminal sensor domain SEEA1960_RS04980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEA1960_RS04980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEA1960_RS04985 PF07005 Sugar-binding N-terminal domain SEEA1960_RS04985 PF17042 Nucleotide-binding C-terminal domain SEEA1960_RS04990 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS04995 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS05000 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS05005 PF02447 GntP family permease SEEA1960_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS05010 PF03466 LysR substrate binding domain SEEA1960_RS05015 PF07690 Major Facilitator Superfamily SEEA1960_RS05025 PF00488 MutS domain V SEEA1960_RS05025 PF05190 MutS family domain IV SEEA1960_RS05025 PF05192 MutS domain III SEEA1960_RS05025 PF05188 MutS domain II SEEA1960_RS05025 PF01624 MutS domain I SEEA1960_RS05045 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS05050 PF13737 Transposase DDE domain SEEA1960_RS05085 PF04741 InvH outer membrane lipoprotein SEEA1960_RS05090 PF12833 Helix-turn-helix domain SEEA1960_RS05095 PF03958 Bacterial type II/III secretion system short domain SEEA1960_RS05095 PF00263 Bacterial type II and III secretion system protein SEEA1960_RS05100 PF07201 HrpJ-like domain SEEA1960_RS05105 PF00771 FHIPEP family SEEA1960_RS05110 PF03519 Invasion protein B family SEEA1960_RS05115 PF18269 T3SS EscN ATPase C-terminal domain SEEA1960_RS05115 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEA1960_RS05115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS05120 PF02090 Salmonella surface presentation of antigen gene type M protein SEEA1960_RS05125 PF02510 Surface presentation of antigens protein SEEA1960_RS05130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEA1960_RS05135 PF00813 FliP family SEEA1960_RS05140 PF01313 Bacterial export proteins, family 3 SEEA1960_RS05145 PF01311 Bacterial export proteins, family 1 SEEA1960_RS05150 PF01312 FlhB HrpN YscU SpaS Family SEEA1960_RS05155 PF07720 Tetratricopeptide repeat SEEA1960_RS05160 PF16535 Type III cell invasion protein SipB SEEA1960_RS05160 PF04888 Secretion system effector C (SseC) like family SEEA1960_RS05165 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) SEEA1960_RS05170 PF06511 Type III secretion systems tip complex components SEEA1960_RS05175 PF09052 SipA N-terminal domain SEEA1960_RS05180 PF00550 Phosphopantetheine attachment site SEEA1960_RS05190 PF05932 Tir chaperone protein (CesT) family SEEA1960_RS05195 PF09119 SicP binding SEEA1960_RS05195 PF00102 Protein-tyrosine phosphatase SEEA1960_RS05195 PF03545 Yersinia virulence determinant (YopE) SEEA1960_RS05200 PF01464 Transglycosylase SLT domain SEEA1960_RS05205 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS05210 PF12833 Helix-turn-helix domain SEEA1960_RS05215 PF09480 Type III secretion system protein PrgH-EprH (PrgH) SEEA1960_RS05220 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF SEEA1960_RS05230 PF01514 Secretory protein of YscJ/FliF family SEEA1960_RS05235 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) SEEA1960_RS05250 PF12833 Helix-turn-helix domain SEEA1960_RS05265 PF03421 YopJ Serine/Threonine acetyltransferase SEEA1960_RS05270 PF00950 ABC 3 transport family SEEA1960_RS05275 PF00950 ABC 3 transport family SEEA1960_RS05280 PF00005 ABC transporter SEEA1960_RS05285 PF01297 Zinc-uptake complex component A periplasmic SEEA1960_RS05290 PF11756 Nitrous oxide-stimulated promoter SEEA1960_RS05295 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS05295 PF00158 Sigma-54 interaction domain SEEA1960_RS05295 PF01590 GAF domain SEEA1960_RS05300 PF00586 AIR synthase related protein, N-terminal domain SEEA1960_RS05300 PF02769 AIR synthase related protein, C-terminal domain SEEA1960_RS05305 PF01924 Hydrogenase formation hypA family SEEA1960_RS05310 PF01455 HupF/HypC family SEEA1960_RS05315 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEA1960_RS05320 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEA1960_RS05330 PF11046 Transcriptional repressor of hyc and hyp operons SEEA1960_RS05335 PF13247 4Fe-4S dicluster domain SEEA1960_RS05340 PF00361 Proton-conducting membrane transporter SEEA1960_RS05345 PF00146 NADH dehydrogenase SEEA1960_RS05350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SEEA1960_RS05350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SEEA1960_RS05350 PF00374 Nickel-dependent hydrogenase SEEA1960_RS05355 PF12838 4Fe-4S dicluster domain SEEA1960_RS05360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEA1960_RS05365 PF07450 Formate hydrogenlyase maturation protein HycH SEEA1960_RS05370 PF01750 Hydrogenase maturation protease SEEA1960_RS05380 PF12800 4Fe-4S binding domain SEEA1960_RS05380 PF13247 4Fe-4S dicluster domain SEEA1960_RS05385 PF07503 HypF finger SEEA1960_RS05385 PF17788 HypF Kae1-like domain SEEA1960_RS05385 PF01300 Telomere recombination SEEA1960_RS05385 PF00708 Acylphosphatase SEEA1960_RS05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS05390 PF18113 Rubredoxin binding C-terminal domain SEEA1960_RS05395 PF00301 Rubredoxin SEEA1960_RS05395 PF00258 Flavodoxin SEEA1960_RS05395 PF00753 Metallo-beta-lactamase superfamily SEEA1960_RS05400 PF00158 Sigma-54 interaction domain SEEA1960_RS05400 PF01590 GAF domain SEEA1960_RS05405 PF00571 CBS domain SEEA1960_RS05405 PF01380 SIS domain SEEA1960_RS05410 PF00455 DeoR C terminal sensor domain SEEA1960_RS05410 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS05415 PF06923 Glucitol operon activator protein (GutM) SEEA1960_RS05420 PF00106 short chain dehydrogenase SEEA1960_RS05425 PF03829 PTS system glucitol/sorbitol-specific IIA component SEEA1960_RS05430 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SEEA1960_RS05430 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SEEA1960_RS05435 PF03608 PTS system enzyme II sorbitol-specific factor SEEA1960_RS05440 PF13406 Transglycosylase SLT domain SEEA1960_RS05450 PF02464 Competence-damaged protein SEEA1960_RS05455 PF00154 recA bacterial DNA recombination protein SEEA1960_RS05460 PF02631 RecX family SEEA1960_RS05470 PF02272 DHHA1 domain SEEA1960_RS05470 PF01411 tRNA synthetases class II (A) SEEA1960_RS05470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SEEA1960_RS05475 PF02599 Global regulator protein family SEEA1960_RS05510 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS05515 PF09335 SNARE associated Golgi protein SEEA1960_RS05520 PF04262 Glutamate-cysteine ligase SEEA1960_RS05525 PF02664 S-Ribosylhomocysteinase (LuxS) SEEA1960_RS05535 PF07690 Major Facilitator Superfamily SEEA1960_RS05540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS05540 PF00529 HlyD membrane-fusion protein of T1SS SEEA1960_RS05545 PF01047 MarR family SEEA1960_RS05550 PF07690 Major Facilitator Superfamily SEEA1960_RS05555 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEA1960_RS05560 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS05565 PF00571 CBS domain SEEA1960_RS05565 PF00005 ABC transporter SEEA1960_RS05570 PF00268 Ribonucleotide reductase, small chain SEEA1960_RS05575 PF00317 Ribonucleotide reductase, all-alpha domain SEEA1960_RS05575 PF08343 Ribonucleotide reductase N-terminal SEEA1960_RS05575 PF02867 Ribonucleotide reductase, barrel domain SEEA1960_RS05580 PF07972 NrdI Flavodoxin like SEEA1960_RS05585 PF00462 Glutaredoxin SEEA1960_RS05595 PF02627 Carboxymuconolactone decarboxylase family SEEA1960_RS05600 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS05600 PF00155 Aminotransferase class I and II SEEA1960_RS05605 PF05957 Bacterial protein of unknown function (DUF883) SEEA1960_RS05610 PF09400 Protein of unknown function (DUF2002) SEEA1960_RS05615 PF06610 L-alanine exporter SEEA1960_RS05625 PF00816 H-NS histone family SEEA1960_RS05635 PF00581 Rhodanese-like domain SEEA1960_RS05635 PF11127 Protein of unknown function (DUF2892) SEEA1960_RS05640 PF01022 Bacterial regulatory protein, arsR family SEEA1960_RS05645 PF01679 Proteolipid membrane potential modulator SEEA1960_RS05650 PF04972 BON domain SEEA1960_RS05650 PF01476 LysM domain SEEA1960_RS05655 PF07729 FCD domain SEEA1960_RS05655 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS05660 PF00324 Amino acid permease SEEA1960_RS05665 PF00202 Aminotransferase class-III SEEA1960_RS05670 PF00171 Aldehyde dehydrogenase family SEEA1960_RS05675 PF01266 FAD dependent oxidoreductase SEEA1960_RS05680 PF08943 CsiD SEEA1960_RS05685 PF01970 Tripartite tricarboxylate transporter TctA family SEEA1960_RS05700 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS05700 PF00072 Response regulator receiver domain SEEA1960_RS05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS05705 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS05710 PF03824 High-affinity nickel-transport protein SEEA1960_RS05725 PF04393 Protein of unknown function (DUF535) SEEA1960_RS05730 PF00805 Pentapeptide repeats (8 copies) SEEA1960_RS05740 PF00593 TonB dependent receptor SEEA1960_RS05740 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS05755 PF00005 ABC transporter SEEA1960_RS05755 PF00664 ABC transporter transmembrane region SEEA1960_RS05760 PF06722 Protein of unknown function (DUF1205) SEEA1960_RS05800 PF00589 Phage integrase family SEEA1960_RS05800 PF13356 Arm DNA-binding domain SEEA1960_RS05810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS05810 PF00529 HlyD membrane-fusion protein of T1SS SEEA1960_RS05815 PF00005 ABC transporter SEEA1960_RS05815 PF00664 ABC transporter transmembrane region SEEA1960_RS05830 PF01668 SmpB protein SEEA1960_RS05835 PF03364 Polyketide cyclase / dehydrase and lipid transport SEEA1960_RS05840 PF03658 RnfH family Ubiquitin SEEA1960_RS05845 PF04355 SmpA / OmlA family SEEA1960_RS05850 PF02463 RecF/RecN/SMC N terminal domain SEEA1960_RS05855 PF01513 ATP-NAD kinase SEEA1960_RS05865 PF01025 GrpE SEEA1960_RS05875 PF01595 Cyclin M transmembrane N-terminal domain SEEA1960_RS05875 PF00571 CBS domain SEEA1960_RS05875 PF03471 Transporter associated domain SEEA1960_RS05880 PF01578 Cytochrome C assembly protein SEEA1960_RS05890 PF00448 SRP54-type protein, GTPase domain SEEA1960_RS05890 PF02881 SRP54-type protein, helical bundle domain SEEA1960_RS05890 PF02978 Signal peptide binding domain SEEA1960_RS05895 PF00886 Ribosomal protein S16 SEEA1960_RS05900 PF05239 PRC-barrel domain SEEA1960_RS05900 PF01782 RimM N-terminal domain SEEA1960_RS05905 PF01746 tRNA (Guanine-1)-methyltransferase SEEA1960_RS05910 PF01245 Ribosomal protein L19 SEEA1960_RS05915 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS05915 PF17152 Periplasmic sensor domain SEEA1960_RS05920 PF13689 YfiR/HmsC-like SEEA1960_RS05925 PF00793 DAHP synthetase I family SEEA1960_RS05930 PF01817 Chorismate mutase type II SEEA1960_RS05930 PF02153 Prephenate dehydrogenase SEEA1960_RS05935 PF08450 SMP-30/Gluconolactonase/LRE-like region SEEA1960_RS05940 PF00800 Prephenate dehydratase SEEA1960_RS05940 PF01817 Chorismate mutase type II SEEA1960_RS05945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SEEA1960_RS05950 PF13525 Outer membrane lipoprotein SEEA1960_RS05955 PF01479 S4 domain SEEA1960_RS05955 PF00849 RNA pseudouridylate synthase SEEA1960_RS05960 PF02578 Multi-copper polyphenol oxidoreductase laccase SEEA1960_RS05965 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS05965 PF07724 AAA domain (Cdc48 subfamily) SEEA1960_RS05965 PF17871 AAA lid domain SEEA1960_RS05965 PF02861 Clp amino terminal domain, pathogenicity island component SEEA1960_RS05965 PF10431 C-terminal, D2-small domain, of ClpB protein SEEA1960_RS06005 PF00083 Sugar (and other) transporter SEEA1960_RS06010 PF10043 Predicted periplasmic lipoprotein (DUF2279) SEEA1960_RS06015 PF13091 PLD-like domain SEEA1960_RS06020 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS06020 PF13380 CoA binding domain SEEA1960_RS06020 PF13607 Succinyl-CoA ligase like flavodoxin domain SEEA1960_RS06025 PF03942 DTW domain SEEA1960_RS06030 PF00085 Thioredoxin SEEA1960_RS06035 PF00588 SpoU rRNA Methylase family SEEA1960_RS06035 PF08032 RNA 2'-O ribose methyltransferase substrate binding SEEA1960_RS06040 PF03167 Uracil DNA glycosylase superfamily SEEA1960_RS06045 PF01228 Glycine radical SEEA1960_RS06050 PF01810 LysE type translocator SEEA1960_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS06055 PF03466 LysR substrate binding domain SEEA1960_RS06060 PF00271 Helicase conserved C-terminal domain SEEA1960_RS06060 PF00270 DEAD/DEAH box helicase SEEA1960_RS06065 PF05175 Methyltransferase small domain SEEA1960_RS06070 PF02910 Fumarate reductase flavoprotein C-term SEEA1960_RS06070 PF00890 FAD binding domain SEEA1960_RS06080 PF08281 Sigma-70, region 4 SEEA1960_RS06080 PF04542 Sigma-70 region 2 SEEA1960_RS06085 PF03872 Anti sigma-E protein RseA, N-terminal domain SEEA1960_RS06085 PF03873 Anti sigma-E protein RseA, C-terminal domain SEEA1960_RS06090 PF17188 MucB/RseB C-terminal domain SEEA1960_RS06090 PF03888 MucB/RseB N-terminal domain SEEA1960_RS06105 PF03144 Elongation factor Tu domain 2 SEEA1960_RS06105 PF00679 Elongation factor G C-terminus SEEA1960_RS06105 PF06421 GTP-binding protein LepA C-terminus SEEA1960_RS06105 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS06110 PF10502 Signal peptidase, peptidase S26 SEEA1960_RS06120 PF00035 Double-stranded RNA binding motif SEEA1960_RS06120 PF14622 Ribonuclease-III-like SEEA1960_RS06125 PF07650 KH domain SEEA1960_RS06125 PF01926 50S ribosome-binding GTPase SEEA1960_RS06130 PF02565 Recombination protein O C terminal SEEA1960_RS06130 PF11967 Recombination protein O N terminal SEEA1960_RS06135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SEEA1960_RS06140 PF01648 4'-phosphopantetheinyl transferase superfamily SEEA1960_RS06145 PF12838 4Fe-4S dicluster domain SEEA1960_RS06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS06150 PF03466 LysR substrate binding domain SEEA1960_RS06155 PF07690 Major Facilitator Superfamily SEEA1960_RS06160 PF08546 Ketopantoate reductase PanE/ApbA C terminal SEEA1960_RS06160 PF02558 Ketopantoate reductase PanE/ApbA SEEA1960_RS06165 PF01418 Helix-turn-helix domain, rpiR family SEEA1960_RS06165 PF01380 SIS domain SEEA1960_RS06170 PF01380 SIS domain SEEA1960_RS06175 PF00367 phosphotransferase system, EIIB SEEA1960_RS06175 PF02378 Phosphotransferase system, EIIC SEEA1960_RS06185 PF14437 MafB19-like deaminase SEEA1960_RS06190 PF01464 Transglycosylase SLT domain SEEA1960_RS06190 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS06200 PF02769 AIR synthase related protein, C-terminal domain SEEA1960_RS06200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SEEA1960_RS06200 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SEEA1960_RS06205 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS06210 PF13942 YfhG lipoprotein SEEA1960_RS06215 PF00072 Response regulator receiver domain SEEA1960_RS06215 PF00158 Sigma-54 interaction domain SEEA1960_RS06220 PF00543 Nitrogen regulatory protein P-II SEEA1960_RS06225 PF00854 POT family SEEA1960_RS06230 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEA1960_RS06230 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEA1960_RS06230 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEA1960_RS06235 PF13520 Amino acid permease SEEA1960_RS06240 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS06240 PF18500 CadC C-terminal domain 1 SEEA1960_RS06245 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS06245 PF00042 Globin SEEA1960_RS06245 PF00970 Oxidoreductase FAD-binding domain SEEA1960_RS06250 PF00464 Serine hydroxymethyltransferase SEEA1960_RS06255 PF12832 MFS_1 like family SEEA1960_RS06260 PF00874 PRD domain SEEA1960_RS06270 PF03824 High-affinity nickel-transport protein SEEA1960_RS06275 PF13187 4Fe-4S dicluster domain SEEA1960_RS06275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEA1960_RS06275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEA1960_RS06280 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS06280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SEEA1960_RS06285 PF17179 4Fe-4S dicluster domain SEEA1960_RS06290 PF12146 Serine aminopeptidase, S33 SEEA1960_RS06295 PF00459 Inositol monophosphatase family SEEA1960_RS06300 PF00588 SpoU rRNA Methylase family SEEA1960_RS06305 PF02082 Transcriptional regulator SEEA1960_RS06310 PF00266 Aminotransferase class-V SEEA1960_RS06315 PF01592 NifU-like N terminal domain SEEA1960_RS06320 PF01521 Iron-sulphur cluster biosynthesis SEEA1960_RS06325 PF07743 HSCB C-terminal oligomerisation domain SEEA1960_RS06330 PF00012 Hsp70 protein SEEA1960_RS06335 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS06340 PF04384 Iron-sulphur cluster assembly SEEA1960_RS06345 PF12404 Peptidase SEEA1960_RS06345 PF00883 Cytosol aminopeptidase family, catalytic domain SEEA1960_RS06350 PF14581 SseB protein C-terminal domain SEEA1960_RS06350 PF07179 SseB protein N-terminal domain SEEA1960_RS06365 PF00581 Rhodanese-like domain SEEA1960_RS06370 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain SEEA1960_RS06370 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain SEEA1960_RS06370 PF11974 Bacterial alpha-2-macroglobulin MG3 domain SEEA1960_RS06370 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain SEEA1960_RS06370 PF17962 Bacterial macroglobulin domain 6 SEEA1960_RS06370 PF01835 MG2 domain SEEA1960_RS06370 PF07678 A-macroglobulin TED domain SEEA1960_RS06370 PF07703 Alpha-2-macroglobulin bait region domain SEEA1960_RS06370 PF00207 Alpha-2-macroglobulin family SEEA1960_RS06375 PF00912 Transglycosylase SEEA1960_RS06375 PF06832 Penicillin-Binding Protein C-terminus Family SEEA1960_RS06375 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS06380 PF00384 Molybdopterin oxidoreductase SEEA1960_RS06380 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS06380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS06385 PF13247 4Fe-4S dicluster domain SEEA1960_RS06385 PF12800 4Fe-4S binding domain SEEA1960_RS06400 PF00334 Nucleoside diphosphate kinase SEEA1960_RS06405 PF04055 Radical SAM superfamily SEEA1960_RS06415 PF13464 Domain of unknown function (DUF4115) SEEA1960_RS06420 PF04551 GcpE protein SEEA1960_RS06425 PF13393 Histidyl-tRNA synthetase SEEA1960_RS06425 PF03129 Anticodon binding domain SEEA1960_RS06430 PF09976 Tetratricopeptide repeat-like domain SEEA1960_RS06435 PF13360 PQQ-like domain SEEA1960_RS06440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SEEA1960_RS06440 PF01926 50S ribosome-binding GTPase SEEA1960_RS06445 PF07191 zinc-ribbons SEEA1960_RS06450 PF01476 LysM domain SEEA1960_RS06450 PF07979 Intimin C-type lectin domain SEEA1960_RS06450 PF02369 Bacterial Ig-like domain (group 1) SEEA1960_RS06450 PF02368 Bacterial Ig-like domain (group 2) SEEA1960_RS06450 PF11924 Inverse autotransporter, beta-domain SEEA1960_RS06470 PF03797 Autotransporter beta-domain SEEA1960_RS06475 PF13742 OB-fold nucleic acid binding domain SEEA1960_RS06475 PF02601 Exonuclease VII, large subunit SEEA1960_RS06480 PF00571 CBS domain SEEA1960_RS06480 PF00478 IMP dehydrogenase / GMP reductase domain SEEA1960_RS06485 PF00117 Glutamine amidotransferase class-I SEEA1960_RS06485 PF00958 GMP synthase C terminal domain SEEA1960_RS06485 PF02540 NAD synthase SEEA1960_RS06505 PF11119 Protein of unknown function (DUF2633) SEEA1960_RS06510 PF00563 EAL domain SEEA1960_RS06510 PF05231 MASE1 SEEA1960_RS06520 PF02503 Polyphosphate kinase middle domain SEEA1960_RS06520 PF17941 Polyphosphate kinase C-terminal domain 1 SEEA1960_RS06520 PF13090 Polyphosphate kinase C-terminal domain 2 SEEA1960_RS06520 PF13089 Polyphosphate kinase N-terminal domain SEEA1960_RS06525 PF00551 Formyl transferase SEEA1960_RS06530 PF00586 AIR synthase related protein, N-terminal domain SEEA1960_RS06530 PF02769 AIR synthase related protein, C-terminal domain SEEA1960_RS06540 PF00860 Permease family SEEA1960_RS06545 PF00308 Bacterial dnaA protein SEEA1960_RS06550 PF03960 ArsC family SEEA1960_RS06555 PF01435 Peptidase family M48 SEEA1960_RS06560 PF01594 AI-2E family transporter SEEA1960_RS06565 PF17853 GGDEF-like domain SEEA1960_RS06565 PF05651 Putative sugar diacid recognition SEEA1960_RS06565 PF13556 PucR C-terminal helix-turn-helix domain SEEA1960_RS06570 PF02447 GntP family permease SEEA1960_RS06575 PF02595 Glycerate kinase family SEEA1960_RS06580 PF00578 AhpC/TSA family SEEA1960_RS06585 PF01842 ACT domain SEEA1960_RS06590 PF00701 Dihydrodipicolinate synthetase family SEEA1960_RS06595 PF06804 NlpB/DapX lipoprotein SEEA1960_RS06605 PF01259 SAICAR synthetase SEEA1960_RS06610 PF04228 Putative neutral zinc metallopeptidase SEEA1960_RS06615 PF17176 tRNA-binding domain SEEA1960_RS06615 PF05127 Helicase SEEA1960_RS06615 PF13718 GNAT acetyltransferase 2 SEEA1960_RS06615 PF08351 Domain of unknown function (DUF1726) SEEA1960_RS06620 PF13980 Uncharacterised protein family (UPF0370) SEEA1960_RS06625 PF07687 Peptidase dimerisation domain SEEA1960_RS06625 PF01546 Peptidase family M20/M25/M40 SEEA1960_RS06630 PF03960 ArsC family SEEA1960_RS06635 PF00873 AcrB/AcrD/AcrF family SEEA1960_RS06640 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SEEA1960_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS06640 PF00672 HAMP domain SEEA1960_RS06640 PF07730 Histidine kinase SEEA1960_RS06645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEA1960_RS06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS06645 PF13247 4Fe-4S dicluster domain SEEA1960_RS06650 PF00144 Beta-lactamase SEEA1960_RS06655 PF00293 NUDIX domain SEEA1960_RS06660 PF06674 Protein of unknown function (DUF1176) SEEA1960_RS06670 PF02780 Transketolase, C-terminal domain SEEA1960_RS06670 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS06670 PF00456 Transketolase, thiamine diphosphate binding domain SEEA1960_RS06675 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEA1960_RS06685 PF01515 Phosphate acetyl/butaryl transferase SEEA1960_RS06685 PF00390 Malic enzyme, N-terminal domain SEEA1960_RS06685 PF03949 Malic enzyme, NAD binding domain SEEA1960_RS06690 PF00936 BMC domain SEEA1960_RS06695 PF10662 Ethanolamine utilisation - propanediol utilisation SEEA1960_RS06700 PF06249 Ethanolamine utilisation protein EutQ SEEA1960_RS06705 PF01923 Cobalamin adenosyltransferase SEEA1960_RS06710 PF01515 Phosphate acetyl/butaryl transferase SEEA1960_RS06715 PF00936 BMC domain SEEA1960_RS06720 PF03319 Ethanolamine utilisation protein EutN/carboxysome SEEA1960_RS06725 PF00171 Aldehyde dehydrogenase family SEEA1960_RS06735 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS06740 PF04346 Ethanolamine utilisation protein, EutH SEEA1960_RS06745 PF06277 Ethanolamine utilisation protein EutA SEEA1960_RS06750 PF06751 Ethanolamine ammonia lyase large subunit (EutB) SEEA1960_RS06755 PF05985 Ethanolamine ammonia-lyase light chain (EutC) SEEA1960_RS06760 PF00936 BMC domain SEEA1960_RS06765 PF00936 BMC domain SEEA1960_RS06765 PF16365 Ethanolamine utilization protein EutK C-terminus SEEA1960_RS06770 PF12833 Helix-turn-helix domain SEEA1960_RS06780 PF01218 Coproporphyrinogen III oxidase SEEA1960_RS06785 PF01520 N-acetylmuramoyl-L-alanine amidase SEEA1960_RS06790 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS06795 PF11143 Protein of unknown function (DUF2919) SEEA1960_RS06800 PF06572 Protein of unknown function (DUF1131) SEEA1960_RS06805 PF04261 Dyp-type peroxidase family SEEA1960_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS06830 PF00005 ABC transporter SEEA1960_RS06835 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS06845 PF00912 Transglycosylase SEEA1960_RS06850 PF17263 Family of unknown function (DUF5329) SEEA1960_RS06855 PF00117 Glutamine amidotransferase class-I SEEA1960_RS06860 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS06860 PF00155 Aminotransferase class I and II SEEA1960_RS06865 PF08543 Phosphomethylpyrimidine kinase SEEA1960_RS06875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SEEA1960_RS06880 PF00391 PEP-utilising enzyme, mobile domain SEEA1960_RS06880 PF05524 PEP-utilising enzyme, N-terminal SEEA1960_RS06880 PF02896 PEP-utilising enzyme, TIM barrel domain SEEA1960_RS06885 PF00381 PTS HPr component phosphorylation site SEEA1960_RS06890 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS06905 PF04354 ZipA, C-terminal FtsZ-binding domain SEEA1960_RS06915 PF12843 Putative quorum-sensing-regulated virulence factor SEEA1960_RS06920 PF13593 SBF-like CPA transporter family (DUF4137) SEEA1960_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS06925 PF03466 LysR substrate binding domain SEEA1960_RS06930 PF03502 Nucleoside-specific channel-forming protein, Tsx SEEA1960_RS06935 PF01048 Phosphorylase superfamily SEEA1960_RS06940 PF03825 Nucleoside H+ symporter SEEA1960_RS06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS06950 PF03466 LysR substrate binding domain SEEA1960_RS06975 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEA1960_RS06980 PF07037 Putative transcription regulator (DUF1323) SEEA1960_RS06985 PF07037 Putative transcription regulator (DUF1323) SEEA1960_RS07005 PF05231 MASE1 SEEA1960_RS07005 PF00563 EAL domain SEEA1960_RS07010 PF01773 Na+ dependent nucleoside transporter N-terminus SEEA1960_RS07010 PF07670 Nucleoside recognition SEEA1960_RS07010 PF07662 Na+ dependent nucleoside transporter C-terminus SEEA1960_RS07015 PF01566 Natural resistance-associated macrophage protein SEEA1960_RS07020 PF10697 Protein of unknown function (DUF2502) SEEA1960_RS07025 PF00248 Aldo/keto reductase family SEEA1960_RS07030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS07030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS07030 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS07035 PF00654 Voltage gated chloride channel SEEA1960_RS07040 PF02685 Glucokinase SEEA1960_RS07045 PF00155 Aminotransferase class I and II SEEA1960_RS07050 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEA1960_RS07055 PF10810 Protein of unknown function (DUF2545) SEEA1960_RS07060 PF07690 Major Facilitator Superfamily SEEA1960_RS07075 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS07075 PF00672 HAMP domain SEEA1960_RS07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS07080 PF14532 Sigma-54 interaction domain SEEA1960_RS07080 PF00072 Response regulator receiver domain SEEA1960_RS07080 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS07085 PF01278 Omptin family SEEA1960_RS07140 PF03837 RecT family SEEA1960_RS07185 PF01381 Helix-turn-helix SEEA1960_RS07185 PF00717 Peptidase S24-like SEEA1960_RS07205 PF03796 DnaB-like helicase C terminal domain SEEA1960_RS07205 PF00772 DnaB-like helicase N terminal domain SEEA1960_RS07255 PF07102 Protein of unknown function (DUF1364) SEEA1960_RS07285 PF00959 Phage lysozyme SEEA1960_RS07290 PF03245 Bacteriophage Rz lysis protein SEEA1960_RS07320 PF04466 Phage terminase large subunit SEEA1960_RS07320 PF17288 Terminase RNAseH like domain SEEA1960_RS07405 PF13356 Arm DNA-binding domain SEEA1960_RS07405 PF14659 Phage integrase, N-terminal SAM-like domain SEEA1960_RS07405 PF00589 Phage integrase family SEEA1960_RS07455 PF03837 RecT family SEEA1960_RS07560 PF07102 Protein of unknown function (DUF1364) SEEA1960_RS07590 PF00959 Phage lysozyme SEEA1960_RS07595 PF03245 Bacteriophage Rz lysis protein SEEA1960_RS07625 PF17288 Terminase RNAseH like domain SEEA1960_RS07625 PF04466 Phage terminase large subunit SEEA1960_RS07710 PF00589 Phage integrase family SEEA1960_RS07710 PF14659 Phage integrase, N-terminal SAM-like domain SEEA1960_RS07710 PF13356 Arm DNA-binding domain SEEA1960_RS07720 PF01226 Formate/nitrite transporter SEEA1960_RS07725 PF04333 MlaA lipoprotein SEEA1960_RS07730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SEEA1960_RS07735 PF04175 Protein of unknown function (DUF406) SEEA1960_RS07740 PF02803 Thiolase, C-terminal domain SEEA1960_RS07740 PF00108 Thiolase, N-terminal domain SEEA1960_RS07745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SEEA1960_RS07745 PF00378 Enoyl-CoA hydratase/isomerase SEEA1960_RS07745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS07750 PF00300 Histidine phosphatase superfamily (branch 1) SEEA1960_RS07755 PF01713 Smr domain SEEA1960_RS07760 PF05175 Methyltransferase small domain SEEA1960_RS07765 PF01264 Chorismate synthase SEEA1960_RS07770 PF03411 Penicillin-insensitive murein endopeptidase SEEA1960_RS07775 PF01925 Sulfite exporter TauE/SafE SEEA1960_RS07780 PF04315 Elongation factor P hydroxylase SEEA1960_RS07785 PF08891 YfcL protein SEEA1960_RS07790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SEEA1960_RS07790 PF01266 FAD dependent oxidoreductase SEEA1960_RS07795 PF00109 Beta-ketoacyl synthase, N-terminal domain SEEA1960_RS07795 PF02801 Beta-ketoacyl synthase, C-terminal domain SEEA1960_RS07800 PF02517 CPBP intramembrane metalloprotease SEEA1960_RS07825 PF07690 Major Facilitator Superfamily SEEA1960_RS07835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEA1960_RS07835 PF11890 Domain of unknown function (DUF3410) SEEA1960_RS07835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEA1960_RS07840 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEA1960_RS07840 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEA1960_RS07845 PF01416 tRNA pseudouridine synthase SEEA1960_RS07850 PF09335 SNARE associated Golgi protein SEEA1960_RS07855 PF01039 Carboxyl transferase domain SEEA1960_RS07855 PF17848 Acetyl-coA carboxylase zinc finger domain SEEA1960_RS07860 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS07860 PF08245 Mur ligase middle domain SEEA1960_RS07865 PF05036 Sporulation related domain SEEA1960_RS07870 PF02674 Colicin V production protein SEEA1960_RS07875 PF00156 Phosphoribosyl transferase domain SEEA1960_RS07880 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS07880 PF13426 PAS domain SEEA1960_RS07880 PF00158 Sigma-54 interaction domain SEEA1960_RS07885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SEEA1960_RS07885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEA1960_RS07890 PF13520 Amino acid permease SEEA1960_RS07895 PF01168 Alanine racemase, N-terminal domain SEEA1960_RS07900 PF00324 Amino acid permease SEEA1960_RS07905 PF02441 Flavoprotein SEEA1960_RS07915 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS07920 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS07925 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS07935 PF00005 ABC transporter SEEA1960_RS07940 PF08338 Domain of unknown function (DUF1731) SEEA1960_RS07940 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS07945 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS07945 PF00043 Glutathione S-transferase, C-terminal domain SEEA1960_RS07950 PF14834 Glutathione S-transferase, C-terminal domain SEEA1960_RS07950 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS07955 PF12850 Calcineurin-like phosphoesterase superfamily domain SEEA1960_RS07960 PF00293 NUDIX domain SEEA1960_RS07965 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS07975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS07985 PF03611 PTS system sugar-specific permease component SEEA1960_RS07990 PF00456 Transketolase, thiamine diphosphate binding domain SEEA1960_RS07995 PF02780 Transketolase, C-terminal domain SEEA1960_RS07995 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS07995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SEEA1960_RS08000 PF03606 C4-dicarboxylate anaerobic carrier SEEA1960_RS08005 PF01515 Phosphate acetyl/butaryl transferase SEEA1960_RS08005 PF07085 DRTGG domain SEEA1960_RS08010 PF00871 Acetokinase family SEEA1960_RS08015 PF04217 Protein of unknown function, DUF412 SEEA1960_RS08020 PF03887 YfbU domain SEEA1960_RS08025 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS08030 PF03600 Citrate transporter SEEA1960_RS08030 PF02080 TrkA-C domain SEEA1960_RS08040 PF00155 Aminotransferase class I and II SEEA1960_RS08050 PF03466 LysR substrate binding domain SEEA1960_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS08055 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SEEA1960_RS08060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEA1960_RS08065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SEEA1960_RS08065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SEEA1960_RS08075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEA1960_RS08075 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SEEA1960_RS08075 PF10531 SLBB domain SEEA1960_RS08080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS08080 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS08080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SEEA1960_RS08080 PF00384 Molybdopterin oxidoreductase SEEA1960_RS08085 PF00146 NADH dehydrogenase SEEA1960_RS08090 PF12838 4Fe-4S dicluster domain SEEA1960_RS08095 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SEEA1960_RS08100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SEEA1960_RS08105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SEEA1960_RS08105 PF00361 Proton-conducting membrane transporter SEEA1960_RS08110 PF00361 Proton-conducting membrane transporter SEEA1960_RS08115 PF00361 Proton-conducting membrane transporter SEEA1960_RS08120 PF03797 Autotransporter beta-domain SEEA1960_RS08130 PF12034 Domain of unknown function (DUF3520) SEEA1960_RS08130 PF00092 von Willebrand factor type A domain SEEA1960_RS08130 PF12450 von Willebrand factor SEEA1960_RS08135 PF00072 Response regulator receiver domain SEEA1960_RS08135 PF01584 CheW-like domain SEEA1960_RS08140 PF12706 Beta-lactamase superfamily domain SEEA1960_RS08145 PF13673 Acetyltransferase (GNAT) domain SEEA1960_RS08150 PF05957 Bacterial protein of unknown function (DUF883) SEEA1960_RS08155 PF00425 chorismate binding enzyme SEEA1960_RS08160 PF16582 Middle domain of thiamine pyrophosphate SEEA1960_RS08160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS08160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS08165 PF12697 Alpha/beta hydrolase family SEEA1960_RS08170 PF00378 Enoyl-CoA hydratase/isomerase SEEA1960_RS08175 PF13378 Enolase C-terminal domain-like SEEA1960_RS08180 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS08180 PF00501 AMP-binding enzyme SEEA1960_RS08195 PF00892 EamA-like transporter family SEEA1960_RS08200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SEEA1960_RS08205 PF01522 Polysaccharide deacetylase SEEA1960_RS08210 PF00551 Formyl transferase SEEA1960_RS08210 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS08210 PF02911 Formyl transferase, C-terminal domain SEEA1960_RS08215 PF00535 Glycosyl transferase family 2 SEEA1960_RS08220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SEEA1960_RS08225 PF00300 Histidine phosphatase superfamily (branch 1) SEEA1960_RS08230 PF00293 NUDIX domain SEEA1960_RS08235 PF07437 YfaZ precursor SEEA1960_RS08240 PF00994 Probable molybdopterin binding domain SEEA1960_RS08245 PF01614 Bacterial transcriptional regulator SEEA1960_RS08245 PF09339 IclR helix-turn-helix domain SEEA1960_RS08250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS08250 PF13378 Enolase C-terminal domain-like SEEA1960_RS08255 PF07690 Major Facilitator Superfamily SEEA1960_RS08260 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEA1960_RS08265 PF00994 Probable molybdopterin binding domain SEEA1960_RS08280 PF13183 4Fe-4S dicluster domain SEEA1960_RS08280 PF02754 Cysteine-rich domain SEEA1960_RS08285 PF00890 FAD binding domain SEEA1960_RS08290 PF04324 BFD-like [2Fe-2S] binding domain SEEA1960_RS08290 PF01266 FAD dependent oxidoreductase SEEA1960_RS08295 PF07690 Major Facilitator Superfamily SEEA1960_RS08300 PF03009 Glycerophosphoryl diester phosphodiesterase family SEEA1960_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS08305 PF03466 LysR substrate binding domain SEEA1960_RS08310 PF07690 Major Facilitator Superfamily SEEA1960_RS08315 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS08320 PF00268 Ribonucleotide reductase, small chain SEEA1960_RS08325 PF03477 ATP cone domain SEEA1960_RS08325 PF00317 Ribonucleotide reductase, all-alpha domain SEEA1960_RS08325 PF02867 Ribonucleotide reductase, barrel domain SEEA1960_RS08340 PF07690 Major Facilitator Superfamily SEEA1960_RS08345 PF13378 Enolase C-terminal domain-like SEEA1960_RS08345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS08355 PF03989 DNA gyrase C-terminal domain, beta-propeller SEEA1960_RS08355 PF00521 DNA gyrase/topoisomerase IV, subunit A SEEA1960_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS08360 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS08360 PF09456 RcsC Alpha-Beta-Loop (ABL) SEEA1960_RS08360 PF00072 Response regulator receiver domain SEEA1960_RS08365 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS08365 PF00072 Response regulator receiver domain SEEA1960_RS08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS08370 PF01627 Hpt domain SEEA1960_RS08370 PF16359 RcsD-ABL domain SEEA1960_RS08380 PF00267 Gram-negative porin SEEA1960_RS08385 PF02424 ApbE family SEEA1960_RS08390 PF02805 Metal binding domain of Ada SEEA1960_RS08390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEA1960_RS08390 PF12833 Helix-turn-helix domain SEEA1960_RS08390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SEEA1960_RS08395 PF13532 2OG-Fe(II) oxygenase superfamily SEEA1960_RS08400 PF00005 ABC transporter SEEA1960_RS08405 PF03974 Ecotin SEEA1960_RS08410 PF13187 4Fe-4S dicluster domain SEEA1960_RS08410 PF12800 4Fe-4S binding domain SEEA1960_RS08410 PF00037 4Fe-4S binding domain SEEA1960_RS08415 PF03927 NapD protein SEEA1960_RS08420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS08420 PF00384 Molybdopterin oxidoreductase SEEA1960_RS08420 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS08425 PF12800 4Fe-4S binding domain SEEA1960_RS08425 PF12838 4Fe-4S dicluster domain SEEA1960_RS08430 PF13237 4Fe-4S dicluster domain SEEA1960_RS08430 PF12801 4Fe-4S binding domain SEEA1960_RS08435 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SEEA1960_RS08440 PF03264 NapC/NirT cytochrome c family, N-terminal region SEEA1960_RS08445 PF00005 ABC transporter SEEA1960_RS08450 PF03379 CcmB protein SEEA1960_RS08455 PF01578 Cytochrome C assembly protein SEEA1960_RS08460 PF04995 Heme exporter protein D (CcmD) SEEA1960_RS08465 PF03100 CcmE SEEA1960_RS08470 PF01578 Cytochrome C assembly protein SEEA1960_RS08470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEA1960_RS08475 PF08534 Redoxin SEEA1960_RS08480 PF03918 Cytochrome C biogenesis protein SEEA1960_RS08485 PF00072 Response regulator receiver domain SEEA1960_RS08485 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS08515 PF11893 Domain of unknown function (DUF3413) SEEA1960_RS08515 PF00884 Sulfatase SEEA1960_RS08520 PF07208 Protein of unknown function (DUF1414) SEEA1960_RS08525 PF04245 37-kD nucleoid-associated bacterial protein SEEA1960_RS08535 PF01386 Ribosomal L25p family SEEA1960_RS08540 PF00271 Helicase conserved C-terminal domain SEEA1960_RS08540 PF04851 Type III restriction enzyme, res subunit SEEA1960_RS08545 PF00849 RNA pseudouridylate synthase SEEA1960_RS08545 PF01479 S4 domain SEEA1960_RS08550 PF07690 Major Facilitator Superfamily SEEA1960_RS08560 PF13989 YejG-like protein SEEA1960_RS08565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS08565 PF00005 ABC transporter SEEA1960_RS08570 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS08570 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS08575 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS08580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS08585 PF00563 EAL domain SEEA1960_RS08585 PF12792 CSS motif domain associated with EAL SEEA1960_RS08595 PF00877 NlpC/P60 family SEEA1960_RS08605 PF01569 PAP2 superfamily SEEA1960_RS08610 PF07683 Cobalamin synthesis protein cobW C-terminal domain SEEA1960_RS08610 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEA1960_RS08615 PF09285 Elongation factor P, C-terminal SEEA1960_RS08615 PF01132 Elongation factor P (EF-P) OB domain SEEA1960_RS08615 PF08207 Elongation factor P (EF-P) KOW-like domain SEEA1960_RS08620 PF03692 Putative zinc- or iron-chelating domain SEEA1960_RS08630 PF07690 Major Facilitator Superfamily SEEA1960_RS08635 PF00381 PTS HPr component phosphorylation site SEEA1960_RS08635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS08640 PF00294 pfkB family carbohydrate kinase SEEA1960_RS08645 PF02378 Phosphotransferase system, EIIC SEEA1960_RS08645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS08655 PF03601 Conserved hypothetical protein 698 SEEA1960_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS08660 PF03466 LysR substrate binding domain SEEA1960_RS08665 PF00324 Amino acid permease SEEA1960_RS08675 PF00593 TonB dependent receptor SEEA1960_RS08675 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS08680 PF07690 Major Facilitator Superfamily SEEA1960_RS08685 PF18429 Domain of unknown function (DUF5609) SEEA1960_RS08690 PF03313 Serine dehydratase alpha chain SEEA1960_RS08690 PF03315 Serine dehydratase beta chain SEEA1960_RS08700 PF00756 Putative esterase SEEA1960_RS08710 PF01227 GTP cyclohydrolase I SEEA1960_RS08715 PF04235 Protein of unknown function (DUF418) SEEA1960_RS08720 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS08725 PF13407 Periplasmic binding protein domain SEEA1960_RS08730 PF00005 ABC transporter SEEA1960_RS08735 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS08740 PF01180 Dihydroorotate dehydrogenase SEEA1960_RS08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS08745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEA1960_RS08750 PF10808 Protein of unknown function (DUF2542) SEEA1960_RS08755 PF02698 DUF218 domain SEEA1960_RS08760 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SEEA1960_RS08760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SEEA1960_RS08765 PF04172 LrgB-like family SEEA1960_RS08770 PF03788 LrgA family SEEA1960_RS08775 PF03466 LysR substrate binding domain SEEA1960_RS08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS08780 PF07690 Major Facilitator Superfamily SEEA1960_RS08785 PF07883 Cupin domain SEEA1960_RS08790 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEA1960_RS08795 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS08795 PF14497 Glutathione S-transferase, C-terminal domain SEEA1960_RS08800 PF01494 FAD binding domain SEEA1960_RS08805 PF01207 Dihydrouridine synthase (Dus) SEEA1960_RS08815 PF02321 Outer membrane efflux protein SEEA1960_RS08825 PF09335 SNARE associated Golgi protein SEEA1960_RS08830 PF04893 Yip1 domain SEEA1960_RS08840 PF00768 D-alanyl-D-alanine carboxypeptidase SEEA1960_RS08845 PF01565 FAD binding domain SEEA1960_RS08845 PF09330 D-lactate dehydrogenase, membrane binding SEEA1960_RS08850 PF14310 Fibronectin type III-like domain SEEA1960_RS08850 PF00933 Glycosyl hydrolase family 3 N terminal domain SEEA1960_RS08850 PF01915 Glycosyl hydrolase family 3 C-terminal domain SEEA1960_RS08855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEA1960_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS08865 PF00005 ABC transporter SEEA1960_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS08880 PF13411 MerR HTH family regulatory protein SEEA1960_RS08885 PF07694 5TMR of 5TMR-LYT SEEA1960_RS08885 PF06580 Histidine kinase SEEA1960_RS08890 PF04397 LytTr DNA-binding domain SEEA1960_RS08890 PF00072 Response regulator receiver domain SEEA1960_RS08895 PF07308 Protein of unknown function (DUF1456) SEEA1960_RS08905 PF06998 Protein of unknown function (DUF1307) SEEA1960_RS08910 PF01588 Putative tRNA binding domain SEEA1960_RS08910 PF09334 tRNA synthetases class I (M) SEEA1960_RS08915 PF10609 NUBPL iron-transfer P-loop NTPase SEEA1960_RS08930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS08930 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS08935 PF00577 Outer membrane usher protein SEEA1960_RS08935 PF13954 PapC N-terminal domain SEEA1960_RS08935 PF13953 PapC C-terminal domain SEEA1960_RS08945 PF11776 Nickel/cobalt transporter regulator SEEA1960_RS08950 PF02110 Hydroxyethylthiazole kinase family SEEA1960_RS08955 PF08543 Phosphomethylpyrimidine kinase SEEA1960_RS08960 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS08960 PF07702 UTRA domain SEEA1960_RS08965 PF00294 pfkB family carbohydrate kinase SEEA1960_RS08970 PF03747 ADP-ribosylglycohydrolase SEEA1960_RS08975 PF03825 Nucleoside H+ symporter SEEA1960_RS08980 PF01791 DeoC/LacD family aldolase SEEA1960_RS08985 PF00781 Diacylglycerol kinase catalytic domain SEEA1960_RS08995 PF05932 Tir chaperone protein (CesT) family SEEA1960_RS09005 PF01136 Peptidase family U32 SEEA1960_RS09005 PF16325 Peptidase family U32 C-terminal domain SEEA1960_RS09030 PF13808 DDE_Tnp_1-associated SEEA1960_RS09030 PF01609 Transposase DDE domain SEEA1960_RS09035 PF03527 RHS protein SEEA1960_RS09035 PF05593 RHS Repeat SEEA1960_RS09060 PF15606 Bacterial toxin 34 SEEA1960_RS09060 PF05593 RHS Repeat SEEA1960_RS09060 PF03527 RHS protein SEEA1960_RS09065 PF03130 PBS lyase HEAT-like repeat SEEA1960_RS09085 PF12759 InsA C-terminal domain SEEA1960_RS09085 PF03811 InsA N-terminal domain SEEA1960_RS09120 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS09120 PF00072 Response regulator receiver domain SEEA1960_RS09125 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS09125 PF00672 HAMP domain SEEA1960_RS09130 PF07690 Major Facilitator Superfamily SEEA1960_RS09135 PF00873 AcrB/AcrD/AcrF family SEEA1960_RS09140 PF00873 AcrB/AcrD/AcrF family SEEA1960_RS09145 PF13533 Biotin-lipoyl like SEEA1960_RS09150 PF00012 Hsp70 protein SEEA1960_RS09160 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEA1960_RS09160 PF06029 AlkA N-terminal domain SEEA1960_RS09165 PF08447 PAS fold SEEA1960_RS09165 PF00563 EAL domain SEEA1960_RS09165 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS09165 PF05231 MASE1 SEEA1960_RS09165 PF08448 PAS fold SEEA1960_RS09165 PF13426 PAS domain SEEA1960_RS09170 PF00485 Phosphoribulokinase / Uridine kinase family SEEA1960_RS09175 PF00692 dUTPase SEEA1960_RS09180 PF05170 AsmA family SEEA1960_RS09185 PF03741 Integral membrane protein TerC family SEEA1960_RS09185 PF03471 Transporter associated domain SEEA1960_RS09185 PF00571 CBS domain SEEA1960_RS09195 PF02563 Polysaccharide biosynthesis/export protein SEEA1960_RS09195 PF10531 SLBB domain SEEA1960_RS09195 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SEEA1960_RS09200 PF01451 Low molecular weight phosphotyrosine protein phosphatase SEEA1960_RS09205 PF02706 Chain length determinant protein SEEA1960_RS09205 PF13614 AAA domain SEEA1960_RS09205 PF13807 G-rich domain on putative tyrosine kinase SEEA1960_RS09210 PF00535 Glycosyl transferase family 2 SEEA1960_RS09215 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS09220 PF00534 Glycosyl transferases group 1 SEEA1960_RS09220 PF13439 Glycosyltransferase Family 4 SEEA1960_RS09230 PF00535 Glycosyl transferase family 2 SEEA1960_RS09235 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS09240 PF16363 GDP-mannose 4,6 dehydratase SEEA1960_RS09245 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS09250 PF00293 NUDIX domain SEEA1960_RS09255 PF13579 Glycosyl transferase 4-like domain SEEA1960_RS09255 PF00534 Glycosyl transferases group 1 SEEA1960_RS09260 PF00483 Nucleotidyl transferase SEEA1960_RS09260 PF01050 Mannose-6-phosphate isomerase SEEA1960_RS09265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEA1960_RS09265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEA1960_RS09265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEA1960_RS09265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEA1960_RS09270 PF02397 Bacterial sugar transferase SEEA1960_RS09280 PF04230 Polysaccharide pyruvyl transferase SEEA1960_RS09285 PF00534 Glycosyl transferases group 1 SEEA1960_RS09285 PF13439 Glycosyltransferase Family 4 SEEA1960_RS09295 PF00483 Nucleotidyl transferase SEEA1960_RS09300 PF16363 GDP-mannose 4,6 dehydratase SEEA1960_RS09305 PF04321 RmlD substrate binding domain SEEA1960_RS09310 PF00483 Nucleotidyl transferase SEEA1960_RS09315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SEEA1960_RS09325 PF00483 Nucleotidyl transferase SEEA1960_RS09330 PF16363 GDP-mannose 4,6 dehydratase SEEA1960_RS09335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SEEA1960_RS09340 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS09350 PF00535 Glycosyl transferase family 2 SEEA1960_RS09360 PF00535 Glycosyl transferase family 2 SEEA1960_RS09375 PF00534 Glycosyl transferases group 1 SEEA1960_RS09375 PF13439 Glycosyltransferase Family 4 SEEA1960_RS09380 PF00483 Nucleotidyl transferase SEEA1960_RS09380 PF01050 Mannose-6-phosphate isomerase SEEA1960_RS09385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEA1960_RS09385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEA1960_RS09385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEA1960_RS09385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEA1960_RS09390 PF02397 Bacterial sugar transferase SEEA1960_RS09395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEA1960_RS09395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SEEA1960_RS09405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SEEA1960_RS09405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SEEA1960_RS09410 PF02706 Chain length determinant protein SEEA1960_RS09415 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SEEA1960_RS09415 PF01502 Phosphoribosyl-AMP cyclohydrolase SEEA1960_RS09420 PF00977 Histidine biosynthesis protein SEEA1960_RS09425 PF00977 Histidine biosynthesis protein SEEA1960_RS09430 PF00117 Glutamine amidotransferase class-I SEEA1960_RS09435 PF00475 Imidazoleglycerol-phosphate dehydratase SEEA1960_RS09440 PF00155 Aminotransferase class I and II SEEA1960_RS09445 PF00815 Histidinol dehydrogenase SEEA1960_RS09450 PF01634 ATP phosphoribosyltransferase SEEA1960_RS09450 PF08029 HisG, C-terminal domain SEEA1960_RS09460 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS09465 PF03466 LysR substrate binding domain SEEA1960_RS09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS09470 PF13520 Amino acid permease SEEA1960_RS09475 PF08411 Exonuclease C-terminal SEEA1960_RS09475 PF00929 Exonuclease SEEA1960_RS09490 PF01906 Putative heavy-metal-binding SEEA1960_RS09495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS09495 PF00384 Molybdopterin oxidoreductase SEEA1960_RS09495 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS09500 PF12800 4Fe-4S binding domain SEEA1960_RS09500 PF13247 4Fe-4S dicluster domain SEEA1960_RS09505 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS09510 PF07943 Penicillin-binding protein 5, C-terminal domain SEEA1960_RS09510 PF00768 D-alanyl-D-alanine carboxypeptidase SEEA1960_RS09515 PF06445 GyrI-like small molecule binding domain SEEA1960_RS09520 PF04632 Fusaric acid resistance protein family SEEA1960_RS09525 PF04363 Protein of unknown function (DUF496) SEEA1960_RS09530 PF00288 GHMP kinases N terminal domain SEEA1960_RS09535 PF00871 Acetokinase family SEEA1960_RS09540 PF10662 Ethanolamine utilisation - propanediol utilisation SEEA1960_RS09545 PF00936 BMC domain SEEA1960_RS09555 PF13237 4Fe-4S dicluster domain SEEA1960_RS09555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEA1960_RS09555 PF10531 SLBB domain SEEA1960_RS09555 PF13375 RnfC Barrel sandwich hybrid domain SEEA1960_RS09560 PF00171 Aldehyde dehydrogenase family SEEA1960_RS09560 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS09565 PF00171 Aldehyde dehydrogenase family SEEA1960_RS09570 PF01923 Cobalamin adenosyltransferase SEEA1960_RS09575 PF03319 Ethanolamine utilisation protein EutN/carboxysome SEEA1960_RS09585 PF06130 Phosphate propanoyltransferase SEEA1960_RS09590 PF00936 BMC domain SEEA1960_RS09595 PF00936 BMC domain SEEA1960_RS09605 PF18427 DD-reactivating factor swiveling domain SEEA1960_RS09605 PF08841 Diol dehydratase reactivase ATPase-like domain SEEA1960_RS09610 PF02287 Dehydratase small subunit SEEA1960_RS09615 PF02288 Dehydratase medium subunit SEEA1960_RS09620 PF02286 Dehydratase large subunit SEEA1960_RS09625 PF00936 BMC domain SEEA1960_RS09630 PF00936 BMC domain SEEA1960_RS09635 PF00230 Major intrinsic protein SEEA1960_RS09640 PF12833 Helix-turn-helix domain SEEA1960_RS09640 PF10114 Sensory domain found in PocR SEEA1960_RS09650 PF03186 CobD/Cbib protein SEEA1960_RS09655 PF02570 Precorrin-8X methylmutase SEEA1960_RS09660 PF01888 CbiD SEEA1960_RS09665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS09670 PF05175 Methyltransferase small domain SEEA1960_RS09675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS09680 PF11760 Cobalamin synthesis G N-terminal SEEA1960_RS09680 PF01890 Cobalamin synthesis G C-terminus SEEA1960_RS09680 PF11761 Cobalamin biosynthesis central region SEEA1960_RS09685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS09690 PF02571 Precorrin-6x reductase CbiJ/CobK SEEA1960_RS09695 PF06180 Cobalt chelatase (CbiK) SEEA1960_RS09700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEA1960_RS09705 PF01891 Cobalt uptake substrate-specific transmembrane region SEEA1960_RS09710 PF02553 Cobalt transport protein component CbiN SEEA1960_RS09715 PF02361 Cobalt transport protein SEEA1960_RS09720 PF00005 ABC transporter SEEA1960_RS09725 PF07685 CobB/CobQ-like glutamine amidotransferase domain SEEA1960_RS09730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SEEA1960_RS09735 PF02654 Cobalamin-5-phosphate synthase SEEA1960_RS09740 PF02277 Phosphoribosyltransferase SEEA1960_RS09745 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS09745 PF17969 L,D-transpeptidase C-terminal domain SEEA1960_RS09755 PF01022 Bacterial regulatory protein, arsR family SEEA1960_RS09760 PF01451 Low molecular weight phosphotyrosine protein phosphatase SEEA1960_RS09765 PF06953 Arsenical resistance operon trans-acting repressor ArsD SEEA1960_RS09770 PF02374 Anion-transporting ATPase SEEA1960_RS09775 PF01758 Sodium Bile acid symporter family SEEA1960_RS09795 PF01554 MatE SEEA1960_RS09820 PF01048 Phosphorylase superfamily SEEA1960_RS09820 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus SEEA1960_RS09830 PF04461 Protein of unknown function (DUF520) SEEA1960_RS09845 PF13358 DDE superfamily endonuclease SEEA1960_RS09875 PF00589 Phage integrase family SEEA1960_RS09875 PF13356 Arm DNA-binding domain SEEA1960_RS09885 PF06167 Glucose-regulated metallo-peptidase M90 SEEA1960_RS09915 PF00717 Peptidase S24-like SEEA1960_RS09920 PF13438 Domain of unknown function (DUF4113) SEEA1960_RS09920 PF00817 impB/mucB/samB family SEEA1960_RS09920 PF11799 impB/mucB/samB family C-terminal domain SEEA1960_RS09925 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS09935 PF00267 Gram-negative porin SEEA1960_RS09945 PF01966 HD domain SEEA1960_RS09950 PF00145 C-5 cytosine-specific DNA methylase SEEA1960_RS09950 PF18284 DNA methylase N-terminal domain SEEA1960_RS09955 PF03852 DNA mismatch endonuclease Vsr SEEA1960_RS09960 PF00892 EamA-like transporter family SEEA1960_RS09965 PF05661 Protein of unknown function (DUF808) SEEA1960_RS09970 PF09926 Uncharacterized small protein (DUF2158) SEEA1960_RS09975 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS09975 PF17151 Periplasmic sensor domain SEEA1960_RS09985 PF10733 Protein of unknown function (DUF2525) SEEA1960_RS09990 PF10781 Dextransucrase DSRB SEEA1960_RS09995 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS10000 PF01311 Bacterial export proteins, family 1 SEEA1960_RS10005 PF01313 Bacterial export proteins, family 3 SEEA1960_RS10010 PF00813 FliP family SEEA1960_RS10015 PF04347 Flagellar biosynthesis protein, FliO SEEA1960_RS10020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEA1960_RS10020 PF16973 Flagellar motor switch protein FliN N-terminal SEEA1960_RS10025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEA1960_RS10025 PF02154 Flagellar motor switch protein FliM SEEA1960_RS10030 PF03748 Flagellar basal body-associated protein FliL SEEA1960_RS10035 PF02120 Flagellar hook-length control protein FliK SEEA1960_RS10040 PF02050 Flagellar FliJ protein SEEA1960_RS10045 PF18269 T3SS EscN ATPase C-terminal domain SEEA1960_RS10045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS10050 PF02108 Flagellar assembly protein FliH SEEA1960_RS10055 PF01706 FliG C-terminal domain SEEA1960_RS10055 PF14841 FliG middle domain SEEA1960_RS10055 PF14842 FliG N-terminal domain SEEA1960_RS10060 PF08345 Flagellar M-ring protein C-terminal SEEA1960_RS10060 PF01514 Secretory protein of YscJ/FliF family SEEA1960_RS10065 PF02049 Flagellar hook-basal body complex protein FliE SEEA1960_RS10075 PF01206 Sulfurtransferase TusA SEEA1960_RS10080 PF04143 Sulphur transport SEEA1960_RS10090 PF13987 YedD-like protein SEEA1960_RS10095 PF00128 Alpha amylase, catalytic domain SEEA1960_RS10095 PF02806 Alpha amylase, C-terminal all-beta domain SEEA1960_RS10100 PF05400 Flagellar protein FliT SEEA1960_RS10105 PF02561 Flagellar protein FliS SEEA1960_RS10110 PF02465 Flagellar hook-associated protein 2 N-terminus SEEA1960_RS10110 PF07195 Flagellar hook-associated protein 2 C-terminus SEEA1960_RS10110 PF07196 Flagellin hook IN motif SEEA1960_RS10120 PF00700 Bacterial flagellin C-terminal helical region SEEA1960_RS10120 PF08884 Flagellin D3 domain SEEA1960_RS10120 PF00669 Bacterial flagellin N-terminal helical region SEEA1960_RS10130 PF04545 Sigma-70, region 4 SEEA1960_RS10130 PF04539 Sigma-70 region 3 SEEA1960_RS10130 PF04542 Sigma-70 region 2 SEEA1960_RS10135 PF02899 Phage integrase, N-terminal SAM-like domain SEEA1960_RS10140 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS10145 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS10155 PF00005 ABC transporter SEEA1960_RS10160 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS10160 PF03472 Autoinducer binding domain SEEA1960_RS10165 PF10769 Protein of unknown function (DUF2594) SEEA1960_RS10170 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS10170 PF00072 Response regulator receiver domain SEEA1960_RS10175 PF08459 UvrC Helix-hairpin-helix N-terminal SEEA1960_RS10175 PF02151 UvrB/uvrC motif SEEA1960_RS10175 PF01541 GIY-YIG catalytic domain SEEA1960_RS10180 PF01066 CDP-alcohol phosphatidyltransferase SEEA1960_RS10215 PF02810 SEC-C motif SEEA1960_RS10215 PF03695 Uncharacterised protein family (UPF0149) SEEA1960_RS10220 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS10225 PF10678 Protein of unknown function (DUF2492) SEEA1960_RS10230 PF00210 Ferritin-like domain SEEA1960_RS10235 PF13992 YecR-like lipoprotein SEEA1960_RS10245 PF00210 Ferritin-like domain SEEA1960_RS10255 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS10260 PF02358 Trehalose-phosphatase SEEA1960_RS10265 PF00982 Glycosyltransferase family 20 SEEA1960_RS10270 PF00582 Universal stress protein family SEEA1960_RS10275 PF05247 Flagellar transcriptional activator (FlhD) SEEA1960_RS10280 PF05280 Flagellar transcriptional activator (FlhC) SEEA1960_RS10285 PF01618 MotA/TolQ/ExbB proton channel family SEEA1960_RS10295 PF02895 Signal transducing histidine kinase, homodimeric domain SEEA1960_RS10295 PF09078 CheY binding SEEA1960_RS10295 PF01627 Hpt domain SEEA1960_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS10295 PF01584 CheW-like domain SEEA1960_RS10300 PF01584 CheW-like domain SEEA1960_RS10305 PF02203 Tar ligand binding domain homologue SEEA1960_RS10305 PF00672 HAMP domain SEEA1960_RS10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS10310 PF03705 CheR methyltransferase, all-alpha domain SEEA1960_RS10310 PF01739 CheR methyltransferase, SAM binding domain SEEA1960_RS10315 PF01339 CheB methylesterase SEEA1960_RS10315 PF00072 Response regulator receiver domain SEEA1960_RS10320 PF00072 Response regulator receiver domain SEEA1960_RS10325 PF04344 Chemotaxis phosphatase, CheZ SEEA1960_RS10330 PF01312 FlhB HrpN YscU SpaS Family SEEA1960_RS10335 PF00771 FHIPEP family SEEA1960_RS10340 PF06366 Flagellar protein FlhE SEEA1960_RS10345 PF07470 Glycosyl Hydrolase Family 88 SEEA1960_RS10350 PF03717 Penicillin-binding Protein dimerisation domain SEEA1960_RS10350 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS10355 PF00750 tRNA synthetases class I (R) SEEA1960_RS10355 PF05746 DALR anticodon binding domain SEEA1960_RS10355 PF03485 Arginyl tRNA synthetase N terminal domain SEEA1960_RS10360 PF06185 YecM protein SEEA1960_RS10370 PF08003 Protein of unknown function (DUF1698) SEEA1960_RS10375 PF13649 Methyltransferase domain SEEA1960_RS10380 PF01124 MAPEG family SEEA1960_RS10385 PF01904 Protein of unknown function DUF72 SEEA1960_RS10390 PF00857 Isochorismatase family SEEA1960_RS10395 PF01336 OB-fold nucleic acid binding domain SEEA1960_RS10395 PF02938 GAD domain SEEA1960_RS10395 PF00152 tRNA synthetases class II (D, K and N) SEEA1960_RS10400 PF00293 NUDIX domain SEEA1960_RS10405 PF01709 Transcriptional regulator SEEA1960_RS10410 PF02075 Crossover junction endodeoxyribonuclease RuvC SEEA1960_RS10415 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SEEA1960_RS10425 PF01330 RuvA N terminal domain SEEA1960_RS10425 PF07499 RuvA, C-terminal domain SEEA1960_RS10430 PF05496 Holliday junction DNA helicase RuvB P-loop domain SEEA1960_RS10430 PF05491 RuvB C-terminal winged helix domain SEEA1960_RS10430 PF17864 RuvB AAA lid domain SEEA1960_RS10435 PF00950 ABC 3 transport family SEEA1960_RS10440 PF00005 ABC transporter SEEA1960_RS10445 PF01297 Zinc-uptake complex component A periplasmic SEEA1960_RS10450 PF01551 Peptidase family M23 SEEA1960_RS10450 PF08525 Opacity-associated protein A N-terminal motif SEEA1960_RS10450 PF01476 LysM domain SEEA1960_RS10460 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEA1960_RS10465 PF00224 Pyruvate kinase, barrel domain SEEA1960_RS10465 PF02887 Pyruvate kinase, alpha/beta domain SEEA1960_RS10470 PF01418 Helix-turn-helix domain, rpiR family SEEA1960_RS10470 PF01380 SIS domain SEEA1960_RS10480 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SEEA1960_RS10480 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SEEA1960_RS10485 PF00920 Dehydratase family SEEA1960_RS10490 PF01081 KDPG and KHG aldolase SEEA1960_RS10495 PF02222 ATP-grasp domain SEEA1960_RS10500 PF07130 YebG protein SEEA1960_RS10505 PF13995 YebF-like protein SEEA1960_RS10510 PF04391 Protein of unknown function (DUF533) SEEA1960_RS10515 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SEEA1960_RS10515 PF00326 Prolyl oligopeptidase family SEEA1960_RS10520 PF00929 Exonuclease SEEA1960_RS10525 PF00795 Carbon-nitrogen hydrolase SEEA1960_RS10530 PF06440 DNA polymerase III, theta subunit SEEA1960_RS10535 PF04234 CopC domain SEEA1960_RS10540 PF05425 Copper resistance protein D SEEA1960_RS10545 PF10709 Protein of unknown function (DUF2511) SEEA1960_RS10560 PF12468 Type III secretion system leucine rich repeat protein SEEA1960_RS10560 PF14496 C-terminal novel E3 ligase, LRR-interacting SEEA1960_RS10575 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS10615 PF07166 Protein of unknown function (DUF1398) SEEA1960_RS10620 PF05364 Salmonella type III secretion SopE effector N-terminus SEEA1960_RS10620 PF07487 SopE GEF domain SEEA1960_RS10630 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS10635 PF07358 Protein of unknown function (DUF1482) SEEA1960_RS10640 PF07351 Protein of unknown function (DUF1480) SEEA1960_RS10645 PF01189 16S rRNA methyltransferase RsmB/F SEEA1960_RS10645 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SEEA1960_RS10645 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SEEA1960_RS10650 PF02470 MlaD protein SEEA1960_RS10655 PF04403 Paraquat-inducible protein A SEEA1960_RS10660 PF13185 GAF domain SEEA1960_RS10665 PF04352 ProQ/FINO family SEEA1960_RS10665 PF17516 ProQ C-terminal domain SEEA1960_RS10670 PF00595 PDZ domain SEEA1960_RS10670 PF03572 Peptidase family S41 SEEA1960_RS10670 PF17804 Tail specific protease N-terminal domain SEEA1960_RS10670 PF11818 C-terminal domain of tail specific protease (DUF3340) SEEA1960_RS10675 PF01435 Peptidase family M48 SEEA1960_RS10680 PF07690 Major Facilitator Superfamily SEEA1960_RS10685 PF01614 Bacterial transcriptional regulator SEEA1960_RS10685 PF09339 IclR helix-turn-helix domain SEEA1960_RS10690 PF13996 YobH-like protein SEEA1960_RS10695 PF13998 MgrB protein SEEA1960_RS10700 PF13974 YebO-like protein SEEA1960_RS10705 PF10736 Protein of unknown function (DUF2627) SEEA1960_RS10710 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS10715 PF03717 Penicillin-binding Protein dimerisation domain SEEA1960_RS10715 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS10720 PF13847 Methyltransferase domain SEEA1960_RS10725 PF02659 Putative manganese efflux pump SEEA1960_RS10735 PF06173 Protein of unknown function (DUF986) SEEA1960_RS10740 PF03613 PTS system mannose/fructose/sorbose family IID component SEEA1960_RS10745 PF03609 PTS system sorbose-specific iic component SEEA1960_RS10750 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS10750 PF03610 PTS system fructose IIA component SEEA1960_RS10760 PF03471 Transporter associated domain SEEA1960_RS10760 PF03741 Integral membrane protein TerC family SEEA1960_RS10765 PF12792 CSS motif domain associated with EAL SEEA1960_RS10765 PF00563 EAL domain SEEA1960_RS10770 PF03315 Serine dehydratase beta chain SEEA1960_RS10770 PF03313 Serine dehydratase alpha chain SEEA1960_RS10775 PF00293 NUDIX domain SEEA1960_RS10780 PF04715 Anthranilate synthase component I, N terminal region SEEA1960_RS10780 PF00425 chorismate binding enzyme SEEA1960_RS10785 PF03701 Uncharacterised protein family (UPF0181) SEEA1960_RS10790 PF01042 Endoribonuclease L-PSP SEEA1960_RS10795 PF13307 Helicase C-terminal domain SEEA1960_RS10795 PF04851 Type III restriction enzyme, res subunit SEEA1960_RS10800 PF00814 Glycoprotease family SEEA1960_RS10805 PF03843 Outer membrane lipoprotein Slp family SEEA1960_RS10815 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS10815 PF00501 AMP-binding enzyme SEEA1960_RS10820 PF01612 3'-5' exonuclease SEEA1960_RS10820 PF00570 HRDC domain SEEA1960_RS10825 PF03776 Septum formation topological specificity factor MinE SEEA1960_RS10830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SEEA1960_RS10835 PF05209 Septum formation inhibitor MinC, N-terminal domain SEEA1960_RS10835 PF03775 Septum formation inhibitor MinC, C-terminal domain SEEA1960_RS10840 PF05166 YcgL domain SEEA1960_RS10845 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEA1960_RS10850 PF03692 Putative zinc- or iron-chelating domain SEEA1960_RS10855 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SEEA1960_RS10865 PF02600 Disulfide bond formation protein DsbB SEEA1960_RS10870 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SEEA1960_RS10875 PF07840 FadR C-terminal domain SEEA1960_RS10875 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS10880 PF04293 SpoVR like protein SEEA1960_RS10885 PF01266 FAD dependent oxidoreductase SEEA1960_RS10890 PF00842 Alanine racemase, C-terminal domain SEEA1960_RS10890 PF01168 Alanine racemase, N-terminal domain SEEA1960_RS10895 PF03471 Transporter associated domain SEEA1960_RS10895 PF00999 Sodium/hydrogen exchanger family SEEA1960_RS10895 PF02080 TrkA-C domain SEEA1960_RS10900 PF17676 LD-carboxypeptidase C-terminal domain SEEA1960_RS10900 PF02016 LD-carboxypeptidase N-terminal domain SEEA1960_RS10905 PF01464 Transglycosylase SLT domain SEEA1960_RS10910 PF07317 Flagellar regulator YcgR SEEA1960_RS10910 PF07238 PilZ domain SEEA1960_RS10915 PF04226 Transglycosylase associated protein SEEA1960_RS10920 PF01204 Trehalase SEEA1960_RS10925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SEEA1960_RS10925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SEEA1960_RS10930 PF08173 Membrane bound YbgT-like protein SEEA1960_RS10935 PF02322 Cytochrome bd terminal oxidase subunit II SEEA1960_RS10940 PF01654 Cytochrome bd terminal oxidase subunit I SEEA1960_RS10945 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SEEA1960_RS10950 PF07449 Hydrogenase-1 expression protein HyaE SEEA1960_RS10955 PF01750 Hydrogenase maturation protease SEEA1960_RS10960 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS10965 PF00374 Nickel-dependent hydrogenase SEEA1960_RS10970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEA1960_RS10970 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEA1960_RS10990 PF06071 Protein of unknown function (DUF933) SEEA1960_RS10990 PF01926 50S ribosome-binding GTPase SEEA1960_RS10995 PF01195 Peptidyl-tRNA hydrolase SEEA1960_RS11000 PF10762 Protein of unknown function (DUF2583) SEEA1960_RS11005 PF01740 STAS domain SEEA1960_RS11005 PF00916 Sulfate permease family SEEA1960_RS11010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SEEA1960_RS11010 PF14572 Phosphoribosyl synthetase-associated domain SEEA1960_RS11015 PF00288 GHMP kinases N terminal domain SEEA1960_RS11015 PF08544 GHMP kinases C terminal SEEA1960_RS11020 PF03550 Outer membrane lipoprotein LolB SEEA1960_RS11025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SEEA1960_RS11025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SEEA1960_RS11025 PF01488 Shikimate / quinate 5-dehydrogenase SEEA1960_RS11030 PF00472 RF-1 domain SEEA1960_RS11030 PF03462 PCRF domain SEEA1960_RS11035 PF17827 PrmC N-terminal domain SEEA1960_RS11035 PF13847 Methyltransferase domain SEEA1960_RS11040 PF04247 Invasion gene expression up-regulator, SirB SEEA1960_RS11045 PF13369 Transglutaminase-like superfamily SEEA1960_RS11050 PF00793 DAHP synthetase I family SEEA1960_RS11055 PF01699 Sodium/calcium exchanger protein SEEA1960_RS11060 PF06150 ChaB SEEA1960_RS11065 PF02635 DsrE/DsrF-like family SEEA1960_RS11070 PF11924 Inverse autotransporter, beta-domain SEEA1960_RS11075 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS11075 PF00072 Response regulator receiver domain SEEA1960_RS11080 PF00672 HAMP domain SEEA1960_RS11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS11080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SEEA1960_RS11080 PF07730 Histidine kinase SEEA1960_RS11090 PF07690 Major Facilitator Superfamily SEEA1960_RS11095 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS11095 PF14710 Respiratory nitrate reductase alpha N-terminal SEEA1960_RS11095 PF00384 Molybdopterin oxidoreductase SEEA1960_RS11100 PF14711 Respiratory nitrate reductase beta C-terminal SEEA1960_RS11100 PF13247 4Fe-4S dicluster domain SEEA1960_RS11105 PF02613 Nitrate reductase delta subunit SEEA1960_RS11110 PF02665 Nitrate reductase gamma subunit SEEA1960_RS11165 PF00551 Formyl transferase SEEA1960_RS11165 PF01842 ACT domain SEEA1960_RS11170 PF02810 SEC-C motif SEEA1960_RS11175 PF01734 Patatin-like phospholipase SEEA1960_RS11180 PF00072 Response regulator receiver domain SEEA1960_RS11185 PF00483 Nucleotidyl transferase SEEA1960_RS11190 PF00816 H-NS histone family SEEA1960_RS11195 PF00265 Thymidine kinase SEEA1960_RS11200 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS11200 PF00171 Aldehyde dehydrogenase family SEEA1960_RS11205 PF01914 MarC family integral membrane protein SEEA1960_RS11215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11225 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS11225 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11230 PF00005 ABC transporter SEEA1960_RS11230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS11235 PF00005 ABC transporter SEEA1960_RS11235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS11240 PF00520 Ion transport protein SEEA1960_RS11240 PF00027 Cyclic nucleotide-binding domain SEEA1960_RS11245 PF04269 Protein of unknown function, DUF440 SEEA1960_RS11250 PF13396 Phospholipase_D-nuclease N-terminal SEEA1960_RS11250 PF13091 PLD-like domain SEEA1960_RS11255 PF03795 YCII-related domain SEEA1960_RS11260 PF03544 Gram-negative bacterial TonB protein C-terminal SEEA1960_RS11265 PF03061 Thioesterase superfamily SEEA1960_RS11270 PF04279 Intracellular septation protein A SEEA1960_RS11280 PF03692 Putative zinc- or iron-chelating domain SEEA1960_RS11285 PF03922 OmpW family SEEA1960_RS11290 PF05067 Manganese containing catalase SEEA1960_RS11295 PF05974 Domain of unknown function (DUF892) SEEA1960_RS11300 PF05974 Domain of unknown function (DUF892) SEEA1960_RS11305 PF10685 Stress-induced bacterial acidophilic repeat motif SEEA1960_RS11310 PF00290 Tryptophan synthase alpha chain SEEA1960_RS11315 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS11320 PF00218 Indole-3-glycerol phosphate synthase SEEA1960_RS11320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SEEA1960_RS11325 PF00117 Glutamine amidotransferase class-I SEEA1960_RS11325 PF02885 Glycosyl transferase family, helical bundle domain SEEA1960_RS11325 PF00591 Glycosyl transferase family, a/b domain SEEA1960_RS11330 PF04715 Anthranilate synthase component I, N terminal region SEEA1960_RS11330 PF00425 chorismate binding enzyme SEEA1960_RS11335 PF08255 Trp-operon Leader Peptide SEEA1960_RS11340 PF02811 PHP domain SEEA1960_RS11345 PF01300 Telomere recombination SEEA1960_RS11350 PF01479 S4 domain SEEA1960_RS11350 PF00849 RNA pseudouridylate synthase SEEA1960_RS11355 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SEEA1960_RS11360 PF00106 short chain dehydrogenase SEEA1960_RS11365 PF01343 Peptidase family S49 SEEA1960_RS11365 PF08496 Peptidase family S49 N-terminal SEEA1960_RS11370 PF10692 Protein of unknown function (DUF2498) SEEA1960_RS11375 PF01131 DNA topoisomerase SEEA1960_RS11375 PF01751 Toprim domain SEEA1960_RS11375 PF01396 Topoisomerase DNA binding C4 zinc finger SEEA1960_RS11375 PF08272 Topoisomerase I zinc-ribbon-like SEEA1960_RS11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS11385 PF03466 LysR substrate binding domain SEEA1960_RS11400 PF00330 Aconitase family (aconitate hydratase) SEEA1960_RS11400 PF00694 Aconitase C-terminal domain SEEA1960_RS11405 PF00925 GTP cyclohydrolase II SEEA1960_RS11410 PF01569 PAP2 superfamily SEEA1960_RS11420 PF06305 Lipopolysaccharide assembly protein A domain SEEA1960_RS11425 PF18073 Rubredoxin metal binding domain SEEA1960_RS11430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEA1960_RS11435 PF01253 Translation initiation factor SUI1 SEEA1960_RS11440 PF05433 Glycine zipper 2TM domain SEEA1960_RS11445 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS11445 PF00455 DeoR C terminal sensor domain SEEA1960_RS11455 PF13426 PAS domain SEEA1960_RS11455 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS11455 PF00563 EAL domain SEEA1960_RS11465 PF17876 Cold shock domain SEEA1960_RS11465 PF08206 Ribonuclease B OB domain SEEA1960_RS11465 PF00773 RNB domain SEEA1960_RS11465 PF00575 S1 RNA binding domain SEEA1960_RS11500 PF00005 ABC transporter SEEA1960_RS11505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEA1960_RS11505 PF00005 ABC transporter SEEA1960_RS11510 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11510 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS11515 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS11525 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS11525 PF00158 Sigma-54 interaction domain SEEA1960_RS11530 PF04012 PspA/IM30 family SEEA1960_RS11535 PF06667 Phage shock protein B SEEA1960_RS11540 PF04024 PspC domain SEEA1960_RS11545 PF09584 Phage shock protein PspD (Phageshock_PspD) SEEA1960_RS11550 PF00581 Rhodanese-like domain SEEA1960_RS11555 PF04317 YcjX-like family, DUF463 SEEA1960_RS11560 PF05128 Domain of unknown function (DUF697) SEEA1960_RS11565 PF00158 Sigma-54 interaction domain SEEA1960_RS11565 PF18024 Helix-turn-helix domain SEEA1960_RS11570 PF08534 Redoxin SEEA1960_RS11575 PF13378 Enolase C-terminal domain-like SEEA1960_RS11575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS11580 PF00246 Zinc carboxypeptidase SEEA1960_RS11585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS11590 PF02627 Carboxymuconolactone decarboxylase family SEEA1960_RS11600 PF02613 Nitrate reductase delta subunit SEEA1960_RS11605 PF04976 DMSO reductase anchor subunit (DmsC) SEEA1960_RS11610 PF12800 4Fe-4S binding domain SEEA1960_RS11610 PF13247 4Fe-4S dicluster domain SEEA1960_RS11615 PF00384 Molybdopterin oxidoreductase SEEA1960_RS11615 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS11615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS11620 PF03466 LysR substrate binding domain SEEA1960_RS11630 PF13378 Enolase C-terminal domain-like SEEA1960_RS11630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS11635 PF03222 Tryptophan/tyrosine permease family SEEA1960_RS11645 PF07690 Major Facilitator Superfamily SEEA1960_RS11655 PF03466 LysR substrate binding domain SEEA1960_RS11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS11660 PF00248 Aldo/keto reductase family SEEA1960_RS11670 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS11685 PF12833 Helix-turn-helix domain SEEA1960_RS11685 PF06445 GyrI-like small molecule binding domain SEEA1960_RS11705 PF08534 Redoxin SEEA1960_RS11725 PF00924 Mechanosensitive ion channel SEEA1960_RS11730 PF10749 Protein of unknown function (DUF2534) SEEA1960_RS11735 PF00582 Universal stress protein family SEEA1960_RS11740 PF00027 Cyclic nucleotide-binding domain SEEA1960_RS11740 PF13545 Crp-like helix-turn-helix domain SEEA1960_RS11745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEA1960_RS11745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SEEA1960_RS11750 PF01713 Smr domain SEEA1960_RS11755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS11755 PF02203 Tar ligand binding domain homologue SEEA1960_RS11755 PF00672 HAMP domain SEEA1960_RS11760 PF01544 CorA-like Mg2+ transporter protein SEEA1960_RS11770 PF03880 DbpA RNA binding domain SEEA1960_RS11770 PF00270 DEAD/DEAH box helicase SEEA1960_RS11770 PF00271 Helicase conserved C-terminal domain SEEA1960_RS11775 PF01171 PP-loop family SEEA1960_RS11780 PF00589 Phage integrase family SEEA1960_RS11780 PF12167 Arm DNA-binding domain SEEA1960_RS11795 PF00893 Small Multidrug Resistance protein SEEA1960_RS11800 PF00582 Universal stress protein family SEEA1960_RS11810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SEEA1960_RS11810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS11810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SEEA1960_RS11810 PF10371 Domain of unknown function SEEA1960_RS11810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SEEA1960_RS11815 PF03891 Domain of unknown function (DUF333) SEEA1960_RS11820 PF03724 META domain SEEA1960_RS11825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEA1960_RS11825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEA1960_RS11830 PF11739 Dicarboxylate transport SEEA1960_RS11835 PF13617 YnbE-like lipoprotein SEEA1960_RS11840 PF07027 Protein of unknown function (DUF1318) SEEA1960_RS11850 PF02525 Flavodoxin-like fold SEEA1960_RS11855 PF00271 Helicase conserved C-terminal domain SEEA1960_RS11855 PF04408 Helicase associated domain (HA2) SEEA1960_RS11855 PF00270 DEAD/DEAH box helicase SEEA1960_RS11855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SEEA1960_RS11855 PF11898 Domain of unknown function (DUF3418) SEEA1960_RS11860 PF02698 DUF218 domain SEEA1960_RS11865 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS11870 PF08242 Methyltransferase domain SEEA1960_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11885 PF00005 ABC transporter SEEA1960_RS11890 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS11895 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS11905 PF00657 GDSL-like Lipase/Acylhydrolase SEEA1960_RS11905 PF06767 Sif protein SEEA1960_RS11915 PF02583 Metal-sensitive transcriptional repressor SEEA1960_RS11920 PF00107 Zinc-binding dehydrogenase SEEA1960_RS11920 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS11930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS11930 PF00672 HAMP domain SEEA1960_RS11930 PF02203 Tar ligand binding domain homologue SEEA1960_RS11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS11935 PF03466 LysR substrate binding domain SEEA1960_RS11940 PF07063 Domain of unknown function (DUF1338) SEEA1960_RS11945 PF00135 Carboxylesterase family SEEA1960_RS11950 PF04349 Periplasmic glucan biosynthesis protein, MdoG SEEA1960_RS11955 PF04264 YceI-like domain SEEA1960_RS11960 PF07729 FCD domain SEEA1960_RS11960 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS11965 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS11965 PF00107 Zinc-binding dehydrogenase SEEA1960_RS11970 PF07690 Major Facilitator Superfamily SEEA1960_RS11975 PF00106 short chain dehydrogenase SEEA1960_RS11980 PF13378 Enolase C-terminal domain-like SEEA1960_RS11980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS11985 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS11990 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS11990 PF00455 DeoR C terminal sensor domain SEEA1960_RS11995 PF00834 Ribulose-phosphate 3 epimerase family SEEA1960_RS12000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS12005 PF03437 BtpA family SEEA1960_RS12010 PF03611 PTS system sugar-specific permease component SEEA1960_RS12020 PF05343 M42 glutamyl aminopeptidase SEEA1960_RS12025 PF13302 Acetyltransferase (GNAT) domain SEEA1960_RS12030 PF18836 Beta solenoid repeat from YDCK SEEA1960_RS12035 PF03595 Voltage-dependent anion channel SEEA1960_RS12040 PF03848 Tellurite resistance protein TehB SEEA1960_RS12045 PF11769 Protein of unknown function (DUF3313) SEEA1960_RS12050 PF03594 Benzoate membrane transport protein SEEA1960_RS12055 PF01381 Helix-turn-helix SEEA1960_RS12055 PF07883 Cupin domain SEEA1960_RS12060 PF01136 Peptidase family U32 SEEA1960_RS12060 PF12392 Collagenase SEEA1960_RS12065 PF10829 Protein of unknown function (DUF2554) SEEA1960_RS12070 PF06767 Sif protein SEEA1960_RS12080 PF01427 D-ala-D-ala dipeptidase SEEA1960_RS12085 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS12085 PF00155 Aminotransferase class I and II SEEA1960_RS12090 PF00171 Aldehyde dehydrogenase family SEEA1960_RS12100 PF10753 Toxin GhoT_OrtT SEEA1960_RS12120 PF10735 Protein of unknown function (DUF2526) SEEA1960_RS12125 PF04657 Putative inner membrane exporter, YdcZ SEEA1960_RS12135 PF16884 N-terminal domain of oxidoreductase SEEA1960_RS12135 PF00107 Zinc-binding dehydrogenase SEEA1960_RS12140 PF07729 FCD domain SEEA1960_RS12140 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS12145 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS12145 PF00593 TonB dependent receptor SEEA1960_RS12155 PF06004 Bacterial protein of unknown function (DUF903) SEEA1960_RS12160 PF00324 Amino acid permease SEEA1960_RS12175 PF00797 N-acetyltransferase SEEA1960_RS12180 PF02567 Phenazine biosynthesis-like protein SEEA1960_RS12185 PF02665 Nitrate reductase gamma subunit SEEA1960_RS12190 PF02613 Nitrate reductase delta subunit SEEA1960_RS12195 PF14711 Respiratory nitrate reductase beta C-terminal SEEA1960_RS12195 PF13247 4Fe-4S dicluster domain SEEA1960_RS12200 PF00384 Molybdopterin oxidoreductase SEEA1960_RS12200 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS12200 PF14710 Respiratory nitrate reductase alpha N-terminal SEEA1960_RS12205 PF07690 Major Facilitator Superfamily SEEA1960_RS12210 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS12215 PF07690 Major Facilitator Superfamily SEEA1960_RS12225 PF00267 Gram-negative porin SEEA1960_RS12230 PF00892 EamA-like transporter family SEEA1960_RS12235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS12235 PF00384 Molybdopterin oxidoreductase SEEA1960_RS12235 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS12240 PF00384 Molybdopterin oxidoreductase SEEA1960_RS12240 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS12240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS12245 PF12800 4Fe-4S binding domain SEEA1960_RS12245 PF09163 Formate dehydrogenase N, transmembrane SEEA1960_RS12245 PF13247 4Fe-4S dicluster domain SEEA1960_RS12250 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS12255 PF00107 Zinc-binding dehydrogenase SEEA1960_RS12255 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS12260 PF03949 Malic enzyme, NAD binding domain SEEA1960_RS12260 PF00390 Malic enzyme, N-terminal domain SEEA1960_RS12265 PF08136 30S ribosomal protein subunit S22 family SEEA1960_RS12270 PF10684 Putative biofilm-dependent modulation protein SEEA1960_RS12275 PF02566 OsmC-like protein SEEA1960_RS12280 PF06411 HdeA/HdeB family SEEA1960_RS12290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEA1960_RS12290 PF11941 Domain of unknown function (DUF3459) SEEA1960_RS12290 PF00128 Alpha amylase, catalytic domain SEEA1960_RS12295 PF00128 Alpha amylase, catalytic domain SEEA1960_RS12300 PF00128 Alpha amylase, catalytic domain SEEA1960_RS12300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEA1960_RS12305 PF00155 Aminotransferase class I and II SEEA1960_RS12310 PF03553 Na+/H+ antiporter family SEEA1960_RS12315 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS12325 PF03060 Nitronate monooxygenase SEEA1960_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS12330 PF03466 LysR substrate binding domain SEEA1960_RS12385 PF01042 Endoribonuclease L-PSP SEEA1960_RS12390 PF02547 Queuosine biosynthesis protein SEEA1960_RS12400 PF01494 FAD binding domain SEEA1960_RS12405 PF07690 Major Facilitator Superfamily SEEA1960_RS12415 PF07690 Major Facilitator Superfamily SEEA1960_RS12420 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS12420 PF00107 Zinc-binding dehydrogenase SEEA1960_RS12425 PF07729 FCD domain SEEA1960_RS12425 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS12435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEA1960_RS12435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEA1960_RS12440 PF00374 Nickel-dependent hydrogenase SEEA1960_RS12445 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS12450 PF01750 Hydrogenase maturation protease SEEA1960_RS12455 PF01455 HupF/HypC family SEEA1960_RS12465 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SEEA1960_RS12475 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEA1960_RS12480 PF00267 Gram-negative porin SEEA1960_RS12490 PF01062 Bestrophin, RFP-TM, chloride channel SEEA1960_RS12495 PF13811 Domain of unknown function (DUF4186) SEEA1960_RS12500 PF04960 Glutaminase SEEA1960_RS12505 PF00171 Aldehyde dehydrogenase family SEEA1960_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS12510 PF03466 LysR substrate binding domain SEEA1960_RS12515 PF07690 Major Facilitator Superfamily SEEA1960_RS12520 PF01914 MarC family integral membrane protein SEEA1960_RS12525 PF01047 MarR family SEEA1960_RS12530 PF12833 Helix-turn-helix domain SEEA1960_RS12535 PF13999 MarB protein SEEA1960_RS12540 PF00892 EamA-like transporter family SEEA1960_RS12545 PF07690 Major Facilitator Superfamily SEEA1960_RS12550 PF04076 Bacterial OB fold (BOF) protein SEEA1960_RS12555 PF02464 Competence-damaged protein SEEA1960_RS12560 PF10685 Stress-induced bacterial acidophilic repeat motif SEEA1960_RS12570 PF01432 Peptidase family M3 SEEA1960_RS12575 PF00106 short chain dehydrogenase SEEA1960_RS12580 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS12580 PF07729 FCD domain SEEA1960_RS12585 PF14001 YdfZ protein SEEA1960_RS12590 PF01232 Mannitol dehydrogenase Rossmann domain SEEA1960_RS12590 PF08125 Mannitol dehydrogenase C-terminal domain SEEA1960_RS12595 PF07690 Major Facilitator Superfamily SEEA1960_RS12595 PF00083 Sugar (and other) transporter SEEA1960_RS12600 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS12600 PF00107 Zinc-binding dehydrogenase SEEA1960_RS12605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEA1960_RS12605 PF13378 Enolase C-terminal domain-like SEEA1960_RS12610 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SEEA1960_RS12615 PF06932 Protein of unknown function (DUF1283) SEEA1960_RS12620 PF13302 Acetyltransferase (GNAT) domain SEEA1960_RS12625 PF06788 Uncharacterised protein family (UPF0257) SEEA1960_RS12630 PF06649 Protein of unknown function (DUF1161) SEEA1960_RS12635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS12635 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS12635 PF00384 Molybdopterin oxidoreductase SEEA1960_RS12640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS12640 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS12640 PF00384 Molybdopterin oxidoreductase SEEA1960_RS12645 PF13247 4Fe-4S dicluster domain SEEA1960_RS12645 PF12800 4Fe-4S binding domain SEEA1960_RS12650 PF04976 DMSO reductase anchor subunit (DmsC) SEEA1960_RS12655 PF02613 Nitrate reductase delta subunit SEEA1960_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS12665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEA1960_RS12670 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS12675 PF00005 ABC transporter SEEA1960_RS12675 PF00571 CBS domain SEEA1960_RS12680 PF00654 Voltage gated chloride channel SEEA1960_RS12690 PF00480 ROK family SEEA1960_RS12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS12700 PF03466 LysR substrate binding domain SEEA1960_RS12705 PF07690 Major Facilitator Superfamily SEEA1960_RS12715 PF00089 Trypsin SEEA1960_RS12720 PF00893 Small Multidrug Resistance protein SEEA1960_RS12725 PF00893 Small Multidrug Resistance protein SEEA1960_RS12735 PF01594 AI-2E family transporter SEEA1960_RS12740 PF02233 NAD(P) transhydrogenase beta subunit SEEA1960_RS12745 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SEEA1960_RS12745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SEEA1960_RS12745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SEEA1960_RS12750 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS12760 PF13520 Amino acid permease SEEA1960_RS12765 PF06942 GlpM protein SEEA1960_RS12770 PF00072 Response regulator receiver domain SEEA1960_RS12770 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS12780 PF00267 Gram-negative porin SEEA1960_RS12785 PF13382 Adenine deaminase C-terminal domain SEEA1960_RS12785 PF01979 Amidohydrolase family SEEA1960_RS12790 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS12790 PF00672 HAMP domain SEEA1960_RS12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS12795 PF05472 DNA replication terminus site-binding protein (Ter protein) SEEA1960_RS12800 PF00206 Lyase SEEA1960_RS12800 PF10415 Fumarase C C-terminus SEEA1960_RS12805 PF05683 Fumarase C-terminus SEEA1960_RS12805 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS12810 PF01238 Phosphomannose isomerase type I SEEA1960_RS12815 PF06097 Bacterial protein of unknown function (DUF945) SEEA1960_RS12820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEA1960_RS12820 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS12825 PF00155 Aminotransferase class I and II SEEA1960_RS12830 PF00962 Adenosine/AMP deaminase SEEA1960_RS12835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS12835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEA1960_RS12845 PF05321 Haemolysin expression modulating protein SEEA1960_RS12850 PF10754 Protein of unknown function (DUF2569) SEEA1960_RS12855 PF02508 Rnf-Nqr subunit, membrane protein SEEA1960_RS12860 PF04060 Putative Fe-S cluster SEEA1960_RS12865 PF12838 4Fe-4S dicluster domain SEEA1960_RS12865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEA1960_RS12865 PF13375 RnfC Barrel sandwich hybrid domain SEEA1960_RS12865 PF10531 SLBB domain SEEA1960_RS12870 PF03116 NQR2, RnfD, RnfE family SEEA1960_RS12875 PF04205 FMN-binding domain SEEA1960_RS12880 PF02508 Rnf-Nqr subunit, membrane protein SEEA1960_RS12885 PF10576 Iron-sulfur binding domain of endonuclease III SEEA1960_RS12885 PF00633 Helix-hairpin-helix motif SEEA1960_RS12885 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEA1960_RS12890 PF00854 POT family SEEA1960_RS12895 PF00043 Glutathione S-transferase, C-terminal domain SEEA1960_RS12895 PF02798 Glutathione S-transferase, N-terminal domain SEEA1960_RS12900 PF08543 Phosphomethylpyrimidine kinase SEEA1960_RS12905 PF01479 S4 domain SEEA1960_RS12905 PF00579 tRNA synthetases class I (W and Y) SEEA1960_RS12910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SEEA1960_RS12910 PF01243 Pyridoxamine 5'-phosphate oxidase SEEA1960_RS12915 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SEEA1960_RS12920 PF03702 Anhydro-N-acetylmuramic acid kinase SEEA1960_RS12925 PF05433 Glycine zipper 2TM domain SEEA1960_RS12930 PF01047 MarR family SEEA1960_RS12935 PF07869 Protein of unknown function (DUF1656) SEEA1960_RS12940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS12940 PF00529 HlyD membrane-fusion protein of T1SS SEEA1960_RS12945 PF04632 Fusaric acid resistance protein family SEEA1960_RS12950 PF00080 Copper/zinc superoxide dismutase (SODC) SEEA1960_RS12955 PF00248 Aldo/keto reductase family SEEA1960_RS12960 PF06945 Protein of unknown function (DUF1289) SEEA1960_RS12965 PF16925 Tetracyclin repressor-like, C-terminal domain SEEA1960_RS12965 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS12970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SEEA1960_RS12975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SEEA1960_RS12980 PF00929 Exonuclease SEEA1960_RS12990 PF00462 Glutaredoxin SEEA1960_RS12995 PF00877 NlpC/P60 family SEEA1960_RS13000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SEEA1960_RS13000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SEEA1960_RS13010 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS13015 PF03466 LysR substrate binding domain SEEA1960_RS13020 PF07690 Major Facilitator Superfamily SEEA1960_RS13030 PF00677 Lumazine binding domain SEEA1960_RS13035 PF01554 MatE SEEA1960_RS13050 PF01312 FlhB HrpN YscU SpaS Family SEEA1960_RS13055 PF01311 Bacterial export proteins, family 1 SEEA1960_RS13060 PF01313 Bacterial export proteins, family 3 SEEA1960_RS13065 PF00813 FliP family SEEA1960_RS13070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEA1960_RS13085 PF18269 T3SS EscN ATPase C-terminal domain SEEA1960_RS13085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS13090 PF00771 FHIPEP family SEEA1960_RS13100 PF07201 HrpJ-like domain SEEA1960_RS13115 PF01514 Secretory protein of YscJ/FliF family SEEA1960_RS13155 PF05802 Enterobacterial EspB protein SEEA1960_RS13160 PF04888 Secretion system effector C (SseC) like family SEEA1960_RS13170 PF03433 EspA-like secreted protein SEEA1960_RS13190 PF03958 Bacterial type II/III secretion system short domain SEEA1960_RS13190 PF00263 Bacterial type II and III secretion system protein SEEA1960_RS13200 PF01627 Hpt domain SEEA1960_RS13200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SEEA1960_RS13200 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS13200 PF00672 HAMP domain SEEA1960_RS13200 PF00072 Response regulator receiver domain SEEA1960_RS13205 PF00072 Response regulator receiver domain SEEA1960_RS13205 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS13210 PF13411 MerR HTH family regulatory protein SEEA1960_RS13215 PF08349 Protein of unknown function (DUF1722) SEEA1960_RS13220 PF10965 Protein of unknown function (DUF2767) SEEA1960_RS13225 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS13225 PF00072 Response regulator receiver domain SEEA1960_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS13230 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS13235 PF13247 4Fe-4S dicluster domain SEEA1960_RS13240 PF03916 Polysulphide reductase, NrfD SEEA1960_RS13245 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS13245 PF00384 Molybdopterin oxidoreductase SEEA1960_RS13245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS13250 PF00294 pfkB family carbohydrate kinase SEEA1960_RS13260 PF00561 alpha/beta hydrolase fold SEEA1960_RS13265 PF00324 Amino acid permease SEEA1960_RS13275 PF02887 Pyruvate kinase, alpha/beta domain SEEA1960_RS13275 PF00224 Pyruvate kinase, barrel domain SEEA1960_RS13280 PF04728 Lipoprotein leucine-zipper SEEA1960_RS13285 PF04728 Lipoprotein leucine-zipper SEEA1960_RS13290 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS13290 PF01476 LysM domain SEEA1960_RS13290 PF17969 L,D-transpeptidase C-terminal domain SEEA1960_RS13295 PF02657 Fe-S metabolism associated domain SEEA1960_RS13300 PF00266 Aminotransferase class-V SEEA1960_RS13305 PF01458 Uncharacterized protein family (UPF0051) SEEA1960_RS13310 PF00005 ABC transporter SEEA1960_RS13315 PF01458 Uncharacterized protein family (UPF0051) SEEA1960_RS13320 PF01521 Iron-sulphur cluster biosynthesis SEEA1960_RS13325 PF00375 Sodium:dicarboxylate symporter family SEEA1960_RS13330 PF15930 Domain of unknown function SEEA1960_RS13335 PF03061 Thioesterase superfamily SEEA1960_RS13340 PF01565 FAD binding domain SEEA1960_RS13340 PF02913 FAD linked oxidases, C-terminal domain SEEA1960_RS13340 PF13183 4Fe-4S dicluster domain SEEA1960_RS13345 PF01594 AI-2E family transporter SEEA1960_RS13355 PF08965 Domain of unknown function (DUF1870) SEEA1960_RS13360 PF07690 Major Facilitator Superfamily SEEA1960_RS13365 PF07690 Major Facilitator Superfamily SEEA1960_RS13370 PF08501 Shikimate dehydrogenase substrate binding domain SEEA1960_RS13370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SEEA1960_RS13375 PF01487 Type I 3-dehydroquinase SEEA1960_RS13380 PF01144 Coenzyme A transferase SEEA1960_RS13385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS13385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEA1960_RS13385 PF02770 Acyl-CoA dehydrogenase, middle domain SEEA1960_RS13390 PF02311 AraC-like ligand binding domain SEEA1960_RS13390 PF12833 Helix-turn-helix domain SEEA1960_RS13395 PF01012 Electron transfer flavoprotein domain SEEA1960_RS13400 PF01012 Electron transfer flavoprotein domain SEEA1960_RS13400 PF00766 Electron transfer flavoprotein FAD-binding domain SEEA1960_RS13405 PF01494 FAD binding domain SEEA1960_RS13415 PF00501 AMP-binding enzyme SEEA1960_RS13415 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS13420 PF00391 PEP-utilising enzyme, mobile domain SEEA1960_RS13420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SEEA1960_RS13420 PF02896 PEP-utilising enzyme, TIM barrel domain SEEA1960_RS13425 PF03618 Kinase/pyrophosphorylase SEEA1960_RS13430 PF00793 DAHP synthetase I family SEEA1960_RS13435 PF10636 Hemin uptake protein hemP SEEA1960_RS13440 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SEEA1960_RS13445 PF00563 EAL domain SEEA1960_RS13450 PF00877 NlpC/P60 family SEEA1960_RS13455 PF00005 ABC transporter SEEA1960_RS13460 PF00255 Glutathione peroxidase SEEA1960_RS13465 PF01032 FecCD transport family SEEA1960_RS13470 PF00216 Bacterial DNA-binding protein SEEA1960_RS13475 PF01588 Putative tRNA binding domain SEEA1960_RS13475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SEEA1960_RS13475 PF03484 tRNA synthetase B5 domain SEEA1960_RS13475 PF03147 Ferredoxin-fold anticodon binding domain SEEA1960_RS13475 PF03483 B3/4 domain SEEA1960_RS13480 PF01409 tRNA synthetases class II core domain (F) SEEA1960_RS13480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SEEA1960_RS13490 PF00453 Ribosomal protein L20 SEEA1960_RS13495 PF01632 Ribosomal protein L35 SEEA1960_RS13500 PF00707 Translation initiation factor IF-3, C-terminal domain SEEA1960_RS13500 PF05198 Translation initiation factor IF-3, N-terminal domain SEEA1960_RS13505 PF02824 TGS domain SEEA1960_RS13505 PF03129 Anticodon binding domain SEEA1960_RS13505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEA1960_RS13505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SEEA1960_RS13510 PF01223 DNA/RNA non-specific endonuclease SEEA1960_RS13525 PF04338 Protein of unknown function, DUF481 SEEA1960_RS13530 PF00294 pfkB family carbohydrate kinase SEEA1960_RS13535 PF11080 Endoribonuclease GhoS SEEA1960_RS13540 PF03881 Fructosamine kinase SEEA1960_RS13545 PF14002 YniB-like protein SEEA1960_RS13550 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS13555 PF04307 LexA-binding, inner membrane-associated putative hydrolase SEEA1960_RS13560 PF00375 Sodium:dicarboxylate symporter family SEEA1960_RS13565 PF10729 Cell division activator CedA SEEA1960_RS13575 PF00199 Catalase SEEA1960_RS13575 PF06628 Catalase-related immune-responsive SEEA1960_RS13575 PF18011 C-terminal domain found in long catalases SEEA1960_RS13580 PF04794 YdjC-like protein SEEA1960_RS13585 PF02056 Family 4 glycosyl hydrolase SEEA1960_RS13585 PF11975 Family 4 glycosyl hydrolase C-terminal domain SEEA1960_RS13590 PF12833 Helix-turn-helix domain SEEA1960_RS13590 PF07883 Cupin domain SEEA1960_RS13595 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SEEA1960_RS13600 PF02378 Phosphotransferase system, EIIC SEEA1960_RS13605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS13615 PF04355 SmpA / OmlA family SEEA1960_RS13620 PF02540 NAD synthase SEEA1960_RS13630 PF07813 LTXXQ motif family protein SEEA1960_RS13640 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SEEA1960_RS13645 PF04996 Succinylarginine dihydrolase SEEA1960_RS13650 PF00171 Aldehyde dehydrogenase family SEEA1960_RS13655 PF04958 Arginine N-succinyltransferase beta subunit SEEA1960_RS13660 PF00202 Aminotransferase class-III SEEA1960_RS13670 PF03372 Endonuclease/Exonuclease/phosphatase family SEEA1960_RS13675 PF00293 NUDIX domain SEEA1960_RS13680 PF07383 Protein of unknown function (DUF1496) SEEA1960_RS13685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SEEA1960_RS13685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SEEA1960_RS13690 PF01751 Toprim domain SEEA1960_RS13690 PF01131 DNA topoisomerase SEEA1960_RS13695 PF00586 AIR synthase related protein, N-terminal domain SEEA1960_RS13695 PF02769 AIR synthase related protein, C-terminal domain SEEA1960_RS13700 PF00881 Nitroreductase family SEEA1960_RS13705 PF01343 Peptidase family S49 SEEA1960_RS13710 PF00710 Asparaginase, N-terminal SEEA1960_RS13710 PF17763 Glutaminase/Asparaginase C-terminal domain SEEA1960_RS13715 PF00857 Isochorismatase family SEEA1960_RS13720 PF07023 Protein of unknown function (DUF1315) SEEA1960_RS13725 PF01641 SelR domain SEEA1960_RS13730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SEEA1960_RS13730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SEEA1960_RS13740 PF01263 Aldose 1-epimerase SEEA1960_RS13745 PF00248 Aldo/keto reductase family SEEA1960_RS13750 PF04055 Radical SAM superfamily SEEA1960_RS13750 PF13186 Iron-sulfur cluster-binding domain SEEA1960_RS13755 PF06629 MltA-interacting protein MipA SEEA1960_RS13760 PF06798 PrkA serine protein kinase C-terminal domain SEEA1960_RS13760 PF08298 PrkA AAA domain SEEA1960_RS13765 PF04285 Protein of unknown function (DUF444) SEEA1960_RS13770 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS13770 PF17155 Gammaproteobacterial periplasmic sensor domain SEEA1960_RS13775 PF04073 Aminoacyl-tRNA editing domain SEEA1960_RS13780 PF04284 Protein of unknown function (DUF441) SEEA1960_RS13785 PF12833 Helix-turn-helix domain SEEA1960_RS13785 PF02311 AraC-like ligand binding domain SEEA1960_RS13790 PF07690 Major Facilitator Superfamily SEEA1960_RS13795 PF04343 Protein of unknown function, DUF488 SEEA1960_RS13805 PF03891 Domain of unknown function (DUF333) SEEA1960_RS13810 PF04226 Transglycosylase associated protein SEEA1960_RS13825 PF08956 Domain of unknown function (DUF1869) SEEA1960_RS13830 PF09313 Domain of unknown function (DUF1971) SEEA1960_RS13840 PF01810 LysE type translocator SEEA1960_RS13845 PF01817 Chorismate mutase type II SEEA1960_RS13860 PF00376 MerR family regulatory protein SEEA1960_RS13860 PF09278 MerR, DNA binding SEEA1960_RS13870 PF01909 Nucleotidyltransferase domain SEEA1960_RS13870 PF13427 Domain of unknown function (DUF4111) SEEA1960_RS13875 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SEEA1960_RS13890 PF00924 Mechanosensitive ion channel SEEA1960_RS13895 PF00005 ABC transporter SEEA1960_RS13900 PF00005 ABC transporter SEEA1960_RS13905 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS13915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS13925 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS13940 PF00011 Hsp20/alpha crystallin family SEEA1960_RS13965 PF06316 Enterobacterial Ail/Lom protein SEEA1960_RS13985 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS13995 PF00652 Ricin-type beta-trefoil lectin domain SEEA1960_RS14000 PF06183 DinI-like family SEEA1960_RS14030 PF00180 Isocitrate/isopropylmalate dehydrogenase SEEA1960_RS14035 PF00849 RNA pseudouridylate synthase SEEA1960_RS14045 PF00293 NUDIX domain SEEA1960_RS14055 PF04356 Protein of unknown function (DUF489) SEEA1960_RS14060 PF08328 Adenylosuccinate lyase C-terminal SEEA1960_RS14060 PF00206 Lyase SEEA1960_RS14065 PF00072 Response regulator receiver domain SEEA1960_RS14065 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS14070 PF08918 PhoQ Sensor SEEA1960_RS14075 PF08007 Cupin superfamily protein SEEA1960_RS14095 PF08402 TOBE domain SEEA1960_RS14095 PF00005 ABC transporter SEEA1960_RS14100 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS14105 PF06767 Sif protein SEEA1960_RS14110 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS14115 PF13416 Bacterial extracellular solute-binding protein SEEA1960_RS14120 PF02146 Sir2 family SEEA1960_RS14125 PF00480 ROK family SEEA1960_RS14130 PF02687 FtsX-like permease family SEEA1960_RS14130 PF12704 MacB-like periplasmic core domain SEEA1960_RS14135 PF00005 ABC transporter SEEA1960_RS14140 PF12704 MacB-like periplasmic core domain SEEA1960_RS14140 PF02687 FtsX-like permease family SEEA1960_RS14145 PF00271 Helicase conserved C-terminal domain SEEA1960_RS14145 PF17757 UvrB interaction domain SEEA1960_RS14145 PF03461 TRCF domain SEEA1960_RS14145 PF02559 CarD-like/TRCF domain SEEA1960_RS14145 PF00270 DEAD/DEAH box helicase SEEA1960_RS14150 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS14150 PF01476 LysM domain SEEA1960_RS14150 PF17969 L,D-transpeptidase C-terminal domain SEEA1960_RS14155 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS14160 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS14165 PF05433 Glycine zipper 2TM domain SEEA1960_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS14175 PF05728 Uncharacterised protein family (UPF0227) SEEA1960_RS14180 PF00933 Glycosyl hydrolase family 3 N terminal domain SEEA1960_RS14185 PF01636 Phosphotransferase enzyme family SEEA1960_RS14190 PF13036 Peptidoglycan-synthase activator LpoB SEEA1960_RS14195 PF07233 Protein of unknown function (DUF1425) SEEA1960_RS14200 PF01230 HIT domain SEEA1960_RS14205 PF00593 TonB dependent receptor SEEA1960_RS14205 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS14210 PF02378 Phosphotransferase system, EIIC SEEA1960_RS14210 PF00367 phosphotransferase system, EIIB SEEA1960_RS14215 PF01026 TatD related DNase SEEA1960_RS14220 PF09115 DNA polymerase III, delta subunit, C terminal SEEA1960_RS14225 PF02223 Thymidylate kinase SEEA1960_RS14230 PF02618 YceG-like family SEEA1960_RS14235 PF01063 Amino-transferase class IV SEEA1960_RS14240 PF02801 Beta-ketoacyl synthase, C-terminal domain SEEA1960_RS14240 PF00109 Beta-ketoacyl synthase, N-terminal domain SEEA1960_RS14245 PF00550 Phosphopantetheine attachment site SEEA1960_RS14255 PF00698 Acyl transferase domain SEEA1960_RS14260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SEEA1960_RS14260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SEEA1960_RS14265 PF02504 Fatty acid synthesis protein SEEA1960_RS14270 PF01783 Ribosomal L32p protein family SEEA1960_RS14275 PF02620 Large ribosomal RNA subunit accumulation protein YceD SEEA1960_RS14280 PF02545 Maf-like protein SEEA1960_RS14295 PF00849 RNA pseudouridylate synthase SEEA1960_RS14295 PF01479 S4 domain SEEA1960_RS14305 PF00575 S1 RNA binding domain SEEA1960_RS14305 PF12111 Polyribonucleotide phosphorylase C terminal SEEA1960_RS14305 PF10150 Ribonuclease E/G family SEEA1960_RS14315 PF00669 Bacterial flagellin N-terminal helical region SEEA1960_RS14320 PF00460 Flagella basal body rod protein SEEA1960_RS14320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEA1960_RS14325 PF10135 Rod binding protein SEEA1960_RS14325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SEEA1960_RS14330 PF02119 Flagellar P-ring protein SEEA1960_RS14335 PF02107 Flagellar L-ring protein SEEA1960_RS14340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEA1960_RS14340 PF00460 Flagella basal body rod protein SEEA1960_RS14345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEA1960_RS14345 PF00460 Flagella basal body rod protein SEEA1960_RS14350 PF00460 Flagella basal body rod protein SEEA1960_RS14350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEA1960_RS14350 PF07559 Flagellar basal body protein FlaE SEEA1960_RS14355 PF13861 FlgD Tudor-like domain SEEA1960_RS14355 PF03963 Flagellar hook capping protein - N-terminal region SEEA1960_RS14355 PF13860 FlgD Ig-like domain SEEA1960_RS14360 PF00460 Flagella basal body rod protein SEEA1960_RS14360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEA1960_RS14365 PF00460 Flagella basal body rod protein SEEA1960_RS14370 PF13144 Chaperone for flagella basal body P-ring formation SEEA1960_RS14375 PF04316 Anti-sigma-28 factor, FlgM SEEA1960_RS14380 PF05130 FlgN protein SEEA1960_RS14385 PF03023 Lipid II flippase MurJ SEEA1960_RS14390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS14395 PF04337 Protein of unknown function, DUF480 SEEA1960_RS14400 PF13302 Acetyltransferase (GNAT) domain SEEA1960_RS14405 PF07690 Major Facilitator Superfamily SEEA1960_RS14410 PF04399 Glutaredoxin 2, C terminal domain SEEA1960_RS14410 PF13417 Glutathione S-transferase, N-terminal domain SEEA1960_RS14420 PF01979 Amidohydrolase family SEEA1960_RS14425 PF06183 DinI-like family SEEA1960_RS14430 PF13991 BssS protein family SEEA1960_RS14435 PF01266 FAD dependent oxidoreductase SEEA1960_RS14440 PF10968 Protein of unknown function (DUF2770) SEEA1960_RS14445 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS14450 PF04264 YceI-like domain SEEA1960_RS14455 PF17773 UPF0176 acylphosphatase like domain SEEA1960_RS14455 PF12368 Rhodanase C-terminal SEEA1960_RS14455 PF00581 Rhodanese-like domain SEEA1960_RS14460 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEA1960_RS14470 PF07690 Major Facilitator Superfamily SEEA1960_RS14475 PF13984 MsyB protein SEEA1960_RS14480 PF07119 Protein of unknown function (DUF1375) SEEA1960_RS14485 PF00535 Glycosyl transferase family 2 SEEA1960_RS14490 PF04349 Periplasmic glucan biosynthesis protein, MdoG SEEA1960_RS14500 PF01757 Acyltransferase family SEEA1960_RS14505 PF13091 PLD-like domain SEEA1960_RS14510 PF01661 Macro domain SEEA1960_RS14520 PF10610 Thin aggregative fimbriae synthesis protein SEEA1960_RS14525 PF07012 Curlin associated repeat SEEA1960_RS14530 PF07012 Curlin associated repeat SEEA1960_RS14540 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS14545 PF10627 Curli assembly protein CsgE SEEA1960_RS14550 PF10614 Type VIII secretion system (T8SS), CsgF protein SEEA1960_RS14555 PF03783 Curli production assembly/transport component CsgG SEEA1960_RS14560 PF06496 Protein of unknown function (DUF1097) SEEA1960_RS14565 PF02613 Nitrate reductase delta subunit SEEA1960_RS14570 PF02811 PHP domain SEEA1960_RS14575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEA1960_RS14600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS14600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEA1960_RS14605 PF07690 Major Facilitator Superfamily SEEA1960_RS14610 PF06178 Oligogalacturonate-specific porin protein (KdgM) SEEA1960_RS14615 PF01344 Kelch motif SEEA1960_RS14620 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SEEA1960_RS14630 PF00474 Sodium:solute symporter family SEEA1960_RS14635 PF01418 Helix-turn-helix domain, rpiR family SEEA1960_RS14635 PF01380 SIS domain SEEA1960_RS14640 PF02562 PhoH-like protein SEEA1960_RS14650 PF00474 Sodium:solute symporter family SEEA1960_RS14660 PF00171 Aldehyde dehydrogenase family SEEA1960_RS14660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SEEA1960_RS14660 PF01619 Proline dehydrogenase SEEA1960_RS14660 PF14850 DNA-binding domain of Proline dehydrogenase SEEA1960_RS14670 PF08362 YcdC-like protein, C-terminal region SEEA1960_RS14670 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS14675 PF10685 Stress-induced bacterial acidophilic repeat motif SEEA1960_RS14680 PF03358 NADPH-dependent FMN reductase SEEA1960_RS14685 PF13993 YccJ-like protein SEEA1960_RS14690 PF00328 Histidine phosphatase superfamily (branch 2) SEEA1960_RS14695 PF00578 AhpC/TSA family SEEA1960_RS14700 PF06965 Na+/H+ antiporter 1 SEEA1960_RS14700 PF13462 Thioredoxin SEEA1960_RS14705 PF11412 Disulphide bond corrector protein DsbC SEEA1960_RS14705 PF02683 Cytochrome C biogenesis protein transmembrane region SEEA1960_RS14705 PF13098 Thioredoxin-like domain SEEA1960_RS14740 PF12706 Beta-lactamase superfamily domain SEEA1960_RS14750 PF07690 Major Facilitator Superfamily SEEA1960_RS14755 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEA1960_RS14760 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEA1960_RS14765 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase SEEA1960_RS14770 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SEEA1960_RS14775 PF00171 Aldehyde dehydrogenase family SEEA1960_RS14780 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEA1960_RS14785 PF01047 MarR family SEEA1960_RS14790 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal SEEA1960_RS14790 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal SEEA1960_RS14795 PF01613 Flavin reductase like domain SEEA1960_RS14805 PF00576 HIUase/Transthyretin family SEEA1960_RS14810 PF00072 Response regulator receiver domain SEEA1960_RS14810 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS14815 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS14820 PF03577 Peptidase family C69 SEEA1960_RS14825 PF13132 Domain of unknown function (DUF3950) SEEA1960_RS14830 PF05925 Enterobacterial virulence protein IpgD SEEA1960_RS14835 PF07824 Type III secretion chaperone domain SEEA1960_RS14845 PF00805 Pentapeptide repeats (8 copies) SEEA1960_RS14860 PF01027 Inhibitor of apoptosis-promoting Bax1 SEEA1960_RS14865 PF04358 DsrC like protein SEEA1960_RS14870 PF00708 Acylphosphatase SEEA1960_RS14875 PF12833 Helix-turn-helix domain SEEA1960_RS14880 PF01161 Phosphatidylethanolamine-binding protein SEEA1960_RS14885 PF10672 S-adenosylmethionine-dependent methyltransferase SEEA1960_RS14885 PF17785 PUA-like domain SEEA1960_RS14890 PF08755 Hemimethylated DNA-binding protein YccV like SEEA1960_RS14895 PF13380 CoA binding domain SEEA1960_RS14900 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SEEA1960_RS14905 PF02142 MGS-like domain SEEA1960_RS14910 PF12462 DNA helicase IV / RNA helicase N terminal SEEA1960_RS14910 PF00580 UvrD/REP helicase N-terminal domain SEEA1960_RS14910 PF13361 UvrD-like helicase C-terminal domain SEEA1960_RS14915 PF03733 Inner membrane component domain SEEA1960_RS14920 PF12805 FUSC-like inner membrane protein yccS SEEA1960_RS14925 PF04993 TfoX N-terminal domain SEEA1960_RS14925 PF04994 TfoX C-terminal domain SEEA1960_RS14930 PF03846 Cell division inhibitor SulA SEEA1960_RS14935 PF01389 OmpA-like transmembrane domain SEEA1960_RS14935 PF00691 OmpA family SEEA1960_RS14940 PF17414 MatP C-terminal ribbon-helix-helix domain SEEA1960_RS14940 PF06303 MatP N-terminal domain SEEA1960_RS14945 PF05362 Lon protease (S16) C-terminal proteolytic domain SEEA1960_RS14945 PF13654 AAA domain SEEA1960_RS14950 PF07977 FabA-like domain SEEA1960_RS14955 PF04957 Ribosome modulation factor SEEA1960_RS14960 PF03886 ABC-type transport auxiliary lipoprotein component SEEA1960_RS14965 PF02470 MlaD protein SEEA1960_RS14970 PF04403 Paraquat-inducible protein A SEEA1960_RS14975 PF16326 ABC transporter C-terminal domain SEEA1960_RS14975 PF00005 ABC transporter SEEA1960_RS14975 PF12848 ABC transporter SEEA1960_RS14980 PF10672 S-adenosylmethionine-dependent methyltransferase SEEA1960_RS14980 PF02926 THUMP domain SEEA1960_RS14980 PF01170 Putative RNA methylase family UPF0020 SEEA1960_RS14985 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS14985 PF03473 MOSC domain SEEA1960_RS14985 PF03476 MOSC N-terminal beta barrel domain SEEA1960_RS14990 PF07126 Cell-division protein ZapC SEEA1960_RS14995 PF01180 Dihydroorotate dehydrogenase SEEA1960_RS15000 PF01433 Peptidase family M1 domain SEEA1960_RS15000 PF11940 Domain of unknown function (DUF3458) Ig-like fold SEEA1960_RS15000 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SEEA1960_RS15005 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SEEA1960_RS15005 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SEEA1960_RS15010 PF01235 Sodium:alanine symporter family SEEA1960_RS15015 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS15025 PF13404 AsnC-type helix-turn-helix domain SEEA1960_RS15025 PF01037 Lrp/AsnC ligand binding domain SEEA1960_RS15030 PF00152 tRNA synthetases class II (D, K and N) SEEA1960_RS15030 PF01336 OB-fold nucleic acid binding domain SEEA1960_RS15035 PF00267 Gram-negative porin SEEA1960_RS15040 PF00155 Aminotransferase class I and II SEEA1960_RS15045 PF00753 Metallo-beta-lactamase superfamily SEEA1960_RS15050 PF05951 Bacterial protein of unknown function (DUF882) SEEA1960_RS15060 PF01471 Putative peptidoglycan binding domain SEEA1960_RS15060 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS15065 PF16330 MukB hinge domain SEEA1960_RS15065 PF04310 MukB N-terminal SEEA1960_RS15070 PF04288 MukE-like family SEEA1960_RS15075 PF17192 MukF middle domain SEEA1960_RS15075 PF17193 MukF C-terminal domain SEEA1960_RS15075 PF03882 MukF winged-helix domain SEEA1960_RS15080 PF13847 Methyltransferase domain SEEA1960_RS15085 PF02698 DUF218 domain SEEA1960_RS15090 PF01636 Phosphotransferase enzyme family SEEA1960_RS15095 PF02348 Cytidylyltransferase SEEA1960_RS15100 PF03966 Trm112p-like protein SEEA1960_RS15105 PF06224 Winged helix DNA-binding domain SEEA1960_RS15110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SEEA1960_RS15115 PF00005 ABC transporter SEEA1960_RS15115 PF00664 ABC transporter transmembrane region SEEA1960_RS15120 PF03772 Competence protein SEEA1960_RS15120 PF00753 Metallo-beta-lactamase superfamily SEEA1960_RS15125 PF00216 Bacterial DNA-binding protein SEEA1960_RS15130 PF00575 S1 RNA binding domain SEEA1960_RS15135 PF02224 Cytidylate kinase SEEA1960_RS15140 PF01435 Peptidase family M48 SEEA1960_RS15145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SEEA1960_RS15150 PF00266 Aminotransferase class-V SEEA1960_RS15155 PF04239 Protein of unknown function (DUF421) SEEA1960_RS15160 PF18381 YcaO cyclodehydratase C-terminal domain SEEA1960_RS15160 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SEEA1960_RS15165 PF01226 Formate/nitrite transporter SEEA1960_RS15170 PF01228 Glycine radical SEEA1960_RS15170 PF02901 Pyruvate formate lyase-like SEEA1960_RS15175 PF11047 Salmonella outer protein D SEEA1960_RS15180 PF04055 Radical SAM superfamily SEEA1960_RS15185 PF13520 Amino acid permease SEEA1960_RS15190 PF07690 Major Facilitator Superfamily SEEA1960_RS15195 PF04976 DMSO reductase anchor subunit (DmsC) SEEA1960_RS15200 PF12800 4Fe-4S binding domain SEEA1960_RS15200 PF13247 4Fe-4S dicluster domain SEEA1960_RS15205 PF00384 Molybdopterin oxidoreductase SEEA1960_RS15205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS15205 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS15210 PF02403 Seryl-tRNA synthetase N-terminal domain SEEA1960_RS15210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEA1960_RS15215 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS15215 PF12002 MgsA AAA+ ATPase C terminal SEEA1960_RS15215 PF16193 AAA C-terminal domain SEEA1960_RS15220 PF03548 Outer membrane lipoprotein carrier protein LolA SEEA1960_RS15225 PF09397 Ftsk gamma domain SEEA1960_RS15225 PF17854 FtsK alpha domain SEEA1960_RS15225 PF01580 FtsK/SpoIIIE family SEEA1960_RS15225 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SEEA1960_RS15230 PF01037 Lrp/AsnC ligand binding domain SEEA1960_RS15240 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS15245 PF00664 ABC transporter transmembrane region SEEA1960_RS15245 PF00005 ABC transporter SEEA1960_RS15250 PF00005 ABC transporter SEEA1960_RS15250 PF00664 ABC transporter transmembrane region SEEA1960_RS15255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SEEA1960_RS15265 PF01176 Translation initiation factor 1A / IF-1 SEEA1960_RS15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS15270 PF03466 LysR substrate binding domain SEEA1960_RS15275 PF05726 Pirin C-terminal cupin domain SEEA1960_RS15275 PF02678 Pirin SEEA1960_RS15280 PF00857 Isochorismatase family SEEA1960_RS15290 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS15290 PF02861 Clp amino terminal domain, pathogenicity island component SEEA1960_RS15290 PF10431 C-terminal, D2-small domain, of ClpB protein SEEA1960_RS15290 PF07724 AAA domain (Cdc48 subfamily) SEEA1960_RS15290 PF17871 AAA lid domain SEEA1960_RS15295 PF02617 ATP-dependent Clp protease adaptor protein ClpS SEEA1960_RS15300 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS15310 PF02687 FtsX-like permease family SEEA1960_RS15310 PF12704 MacB-like periplasmic core domain SEEA1960_RS15310 PF00005 ABC transporter SEEA1960_RS15315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS15320 PF04393 Protein of unknown function (DUF535) SEEA1960_RS15325 PF11398 Protein of unknown function (DUF2813) SEEA1960_RS15335 PF03956 Lysine exporter LysO SEEA1960_RS15340 PF03063 Prismane/CO dehydrogenase family SEEA1960_RS15345 PF00970 Oxidoreductase FAD-binding domain SEEA1960_RS15345 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS15345 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS15350 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS15350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS15350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS15355 PF01212 Beta-eliminating lyase SEEA1960_RS15360 PF13460 NAD(P)H-binding SEEA1960_RS15360 PF11066 Protein of unknown function (DUF2867) SEEA1960_RS15365 PF01370 NAD dependent epimerase/dehydratase family SEEA1960_RS15370 PF01510 N-acetylmuramoyl-L-alanine amidase SEEA1960_RS15375 PF01906 Putative heavy-metal-binding SEEA1960_RS15380 PF12883 Protein of unknown function (DUF3828) SEEA1960_RS15385 PF00005 ABC transporter SEEA1960_RS15390 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS15395 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15400 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15405 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS15425 PF03611 PTS system sugar-specific permease component SEEA1960_RS15430 PF05958 tRNA (Uracil-5-)-methyltransferase SEEA1960_RS15435 PF10767 Protein of unknown function (DUF2593) SEEA1960_RS15440 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15445 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15450 PF00005 ABC transporter SEEA1960_RS15450 PF08402 TOBE domain SEEA1960_RS15455 PF13416 Bacterial extracellular solute-binding protein SEEA1960_RS15460 PF10722 Putative bacterial sensory transduction regulator SEEA1960_RS15465 PF08443 RimK-like ATP-grasp domain SEEA1960_RS15465 PF18030 RimK PreATP-grasp domain SEEA1960_RS15470 PF00881 Nitroreductase family SEEA1960_RS15475 PF07214 Protein of unknown function (DUF1418) SEEA1960_RS15480 PF00462 Glutaredoxin SEEA1960_RS15485 PF11045 Putative inner membrane protein of Enterobacteriaceae SEEA1960_RS15490 PF06826 Predicted Permease Membrane Region SEEA1960_RS15490 PF02080 TrkA-C domain SEEA1960_RS15495 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS15500 PF07690 Major Facilitator Superfamily SEEA1960_RS15510 PF07690 Major Facilitator Superfamily SEEA1960_RS15515 PF01569 PAP2 superfamily SEEA1960_RS15520 PF00455 DeoR C terminal sensor domain SEEA1960_RS15520 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS15525 PF07943 Penicillin-binding protein 5, C-terminal domain SEEA1960_RS15525 PF00768 D-alanyl-D-alanine carboxypeptidase SEEA1960_RS15530 PF13417 Glutathione S-transferase, N-terminal domain SEEA1960_RS15530 PF00043 Glutathione S-transferase, C-terminal domain SEEA1960_RS15535 PF07995 Glucose / Sorbosone dehydrogenase SEEA1960_RS15540 PF10799 Biofilm formation protein (YliH/bssR) SEEA1960_RS15545 PF00919 Uncharacterized protein family UPF0004 SEEA1960_RS15545 PF18693 TRAM domain SEEA1960_RS15545 PF04055 Radical SAM superfamily SEEA1960_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15550 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEA1960_RS15555 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS15570 PF01112 Asparaginase SEEA1960_RS15575 PF03453 MoeA N-terminal region (domain I and II) SEEA1960_RS15575 PF03454 MoeA C-terminal region (domain IV) SEEA1960_RS15575 PF00994 Probable molybdopterin binding domain SEEA1960_RS15580 PF00899 ThiF family SEEA1960_RS15585 PF04055 Radical SAM superfamily SEEA1960_RS15590 PF01228 Glycine radical SEEA1960_RS15590 PF02901 Pyruvate formate lyase-like SEEA1960_RS15600 PF07350 Protein of unknown function (DUF1479) SEEA1960_RS15615 PF12848 ABC transporter SEEA1960_RS15615 PF00005 ABC transporter SEEA1960_RS15620 PF17969 L,D-transpeptidase C-terminal domain SEEA1960_RS15620 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS15625 PF03600 Citrate transporter SEEA1960_RS15630 PF01325 Iron dependent repressor, N-terminal DNA binding domain SEEA1960_RS15630 PF02742 Iron dependent repressor, metal binding and dimerisation domain SEEA1960_RS15640 PF00884 Sulfatase SEEA1960_RS15645 PF13505 Outer membrane protein beta-barrel domain SEEA1960_RS15650 PF00892 EamA-like transporter family SEEA1960_RS15655 PF00210 Ferritin-like domain SEEA1960_RS15660 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15670 PF00005 ABC transporter SEEA1960_RS15675 PF00924 Mechanosensitive ion channel SEEA1960_RS15680 PF05971 RNA methyltransferase SEEA1960_RS15685 PF01258 Prokaryotic dksA/traR C4-type zinc finger SEEA1960_RS15690 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS15695 PF02885 Glycosyl transferase family, helical bundle domain SEEA1960_RS15700 PF06733 DEAD_2 SEEA1960_RS15700 PF13307 Helicase C-terminal domain SEEA1960_RS15705 PF00270 DEAD/DEAH box helicase SEEA1960_RS15705 PF00271 Helicase conserved C-terminal domain SEEA1960_RS15710 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS15710 PF00171 Aldehyde dehydrogenase family SEEA1960_RS15715 PF02780 Transketolase, C-terminal domain SEEA1960_RS15715 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS15720 PF00456 Transketolase, thiamine diphosphate binding domain SEEA1960_RS15730 PF07690 Major Facilitator Superfamily SEEA1960_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS15740 PF03466 LysR substrate binding domain SEEA1960_RS15745 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS15745 PF09209 Tetracyclin repressor-like, C-terminal domain SEEA1960_RS15750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS15755 PF00005 ABC transporter SEEA1960_RS15770 PF11076 Putative inner membrane protein YbhQ SEEA1960_RS15775 PF03372 Endonuclease/Exonuclease/phosphatase family SEEA1960_RS15780 PF13091 PLD-like domain SEEA1960_RS15785 PF03706 Lysylphosphatidylglycerol synthase TM region SEEA1960_RS15810 PF01027 Inhibitor of apoptosis-promoting Bax1 SEEA1960_RS15815 PF02391 MoaE protein SEEA1960_RS15820 PF02597 ThiS family SEEA1960_RS15825 PF01967 MoaC family SEEA1960_RS15830 PF00994 Probable molybdopterin binding domain SEEA1960_RS15835 PF06463 Molybdenum Cofactor Synthesis C SEEA1960_RS15835 PF04055 Radical SAM superfamily SEEA1960_RS15840 PF01933 Uncharacterised protein family UPF0052 SEEA1960_RS15845 PF12468 Type III secretion system leucine rich repeat protein SEEA1960_RS15845 PF14496 C-terminal novel E3 ligase, LRR-interacting SEEA1960_RS15850 PF17757 UvrB interaction domain SEEA1960_RS15850 PF02151 UvrB/uvrC motif SEEA1960_RS15850 PF04851 Type III restriction enzyme, res subunit SEEA1960_RS15850 PF00271 Helicase conserved C-terminal domain SEEA1960_RS15850 PF12344 Ultra-violet resistance protein B SEEA1960_RS15865 PF08241 Methyltransferase domain SEEA1960_RS15870 PF00155 Aminotransferase class I and II SEEA1960_RS15875 PF04055 Radical SAM superfamily SEEA1960_RS15875 PF06968 Biotin and Thiamin Synthesis associated domain SEEA1960_RS15880 PF00202 Aminotransferase class-III SEEA1960_RS15885 PF01161 Phosphatidylethanolamine-binding protein SEEA1960_RS15890 PF00221 Aromatic amino acid lyase SEEA1960_RS15895 PF17391 Urocanase N-terminal domain SEEA1960_RS15895 PF17392 Urocanase C-terminal domain SEEA1960_RS15895 PF01175 Urocanase Rossmann-like domain SEEA1960_RS15900 PF07702 UTRA domain SEEA1960_RS15900 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS15905 PF00491 Arginase family SEEA1960_RS15910 PF01979 Amidohydrolase family SEEA1960_RS15915 PF01095 Pectinesterase SEEA1960_RS15920 PF10282 Lactonase, 7-bladed beta-propeller SEEA1960_RS15930 PF00005 ABC transporter SEEA1960_RS15930 PF03459 TOBE domain SEEA1960_RS15935 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS15945 PF10766 Multidrug efflux pump-associated protein AcrZ SEEA1960_RS15950 PF03459 TOBE domain SEEA1960_RS15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS15955 PF00005 ABC transporter SEEA1960_RS15965 PF16363 GDP-mannose 4,6 dehydratase SEEA1960_RS15970 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SEEA1960_RS15970 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SEEA1960_RS15975 PF08544 GHMP kinases C terminal SEEA1960_RS15975 PF00288 GHMP kinases N terminal domain SEEA1960_RS15975 PF10509 Galactokinase galactose-binding signature SEEA1960_RS15980 PF01263 Aldose 1-epimerase SEEA1960_RS15990 PF00300 Histidine phosphatase superfamily (branch 1) SEEA1960_RS15995 PF00005 ABC transporter SEEA1960_RS16000 PF01032 FecCD transport family SEEA1960_RS16005 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEA1960_RS16010 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SEEA1960_RS16015 PF02436 Conserved carboxylase domain SEEA1960_RS16015 PF00364 Biotin-requiring enzyme SEEA1960_RS16015 PF00682 HMGL-like SEEA1960_RS16020 PF04277 Oxaloacetate decarboxylase, gamma chain SEEA1960_RS16025 PF03600 Citrate transporter SEEA1960_RS16025 PF02080 TrkA-C domain SEEA1960_RS16030 PF03466 LysR substrate binding domain SEEA1960_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS16035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS16035 PF03466 LysR substrate binding domain SEEA1960_RS16040 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS16045 PF05683 Fumarase C-terminus SEEA1960_RS16045 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS16050 PF00793 DAHP synthetase I family SEEA1960_RS16055 PF13985 YbgS-like protein SEEA1960_RS16060 PF01545 Cation efflux family SEEA1960_RS16065 PF04973 Nicotinamide mononucleotide transporter SEEA1960_RS16070 PF02445 Quinolinate synthetase A protein SEEA1960_RS16105 PF13174 Tetratricopeptide repeat SEEA1960_RS16105 PF16331 TolA binding protein trimerisation SEEA1960_RS16110 PF00691 OmpA family SEEA1960_RS16115 PF07676 WD40-like Beta Propeller Repeat SEEA1960_RS16115 PF04052 TolB amino-terminal domain SEEA1960_RS16120 PF06519 TolA C-terminal SEEA1960_RS16125 PF02472 Biopolymer transport protein ExbD/TolR SEEA1960_RS16130 PF01618 MotA/TolQ/ExbB proton channel family SEEA1960_RS16135 PF03061 Thioesterase superfamily SEEA1960_RS16140 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) SEEA1960_RS16150 PF08173 Membrane bound YbgT-like protein SEEA1960_RS16155 PF02322 Cytochrome bd terminal oxidase subunit II SEEA1960_RS16160 PF01654 Cytochrome bd terminal oxidase subunit I SEEA1960_RS16165 PF02629 CoA binding domain SEEA1960_RS16165 PF00549 CoA-ligase SEEA1960_RS16170 PF00549 CoA-ligase SEEA1960_RS16170 PF08442 ATP-grasp domain SEEA1960_RS16175 PF02817 e3 binding domain SEEA1960_RS16175 PF00364 Biotin-requiring enzyme SEEA1960_RS16175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SEEA1960_RS16180 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS16180 PF00676 Dehydrogenase E1 component SEEA1960_RS16180 PF16078 2-oxoglutarate dehydrogenase N-terminus SEEA1960_RS16180 PF16870 2-oxoglutarate dehydrogenase C-terminal SEEA1960_RS16185 PF13085 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS16190 PF00890 FAD binding domain SEEA1960_RS16190 PF02910 Fumarate reductase flavoprotein C-term SEEA1960_RS16195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SEEA1960_RS16200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SEEA1960_RS16215 PF00285 Citrate synthase, C-terminal domain SEEA1960_RS16220 PF05145 Transition state regulatory protein AbrB SEEA1960_RS16225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SEEA1960_RS16225 PF06827 Zinc finger found in FPG and IleRS SEEA1960_RS16225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SEEA1960_RS16230 PF03746 LamB/YcsF family SEEA1960_RS16235 PF02626 Carboxyltransferase domain, subdomain A and B SEEA1960_RS16240 PF02682 Carboxyltransferase domain, subdomain C and D SEEA1960_RS16245 PF01784 NIF3 (NGG1p interacting factor 3) SEEA1960_RS16255 PF00854 POT family SEEA1960_RS16260 PF00875 DNA photolyase SEEA1960_RS16260 PF03441 FAD binding domain of DNA photolyase SEEA1960_RS16265 PF10725 Protein of unknown function (DUF2517) SEEA1960_RS16275 PF03814 Potassium-transporting ATPase A subunit SEEA1960_RS16285 PF02669 K+-transporting ATPase, c chain SEEA1960_RS16290 PF02702 Osmosensitive K+ channel His kinase sensor domain SEEA1960_RS16290 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS16290 PF13492 GAF domain SEEA1960_RS16290 PF13493 Domain of unknown function (DUF4118) SEEA1960_RS16295 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS16295 PF00072 Response regulator receiver domain SEEA1960_RS16300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEA1960_RS16300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEA1960_RS16300 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEA1960_RS16305 PF13520 Amino acid permease SEEA1960_RS16320 PF12697 Alpha/beta hydrolase family SEEA1960_RS16325 PF01402 Ribbon-helix-helix protein, copG family SEEA1960_RS16330 PF00258 Flavodoxin SEEA1960_RS16335 PF01475 Ferric uptake regulator family SEEA1960_RS16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS16340 PF03466 LysR substrate binding domain SEEA1960_RS16345 PF14537 Cytochrome c3 SEEA1960_RS16345 PF00890 FAD binding domain SEEA1960_RS16355 PF07690 Major Facilitator Superfamily SEEA1960_RS16360 PF13982 YbfN-like lipoprotein SEEA1960_RS16365 PF03573 outer membrane porin, OprD family SEEA1960_RS16370 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SEEA1960_RS16370 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEA1960_RS16375 PF02378 Phosphotransferase system, EIIC SEEA1960_RS16375 PF00367 phosphotransferase system, EIIB SEEA1960_RS16375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SEEA1960_RS16380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SEEA1960_RS16385 PF01979 Amidohydrolase family SEEA1960_RS16390 PF01047 MarR family SEEA1960_RS16390 PF00480 ROK family SEEA1960_RS16395 PF13344 Haloacid dehalogenase-like hydrolase SEEA1960_RS16405 PF00733 Asparagine synthase SEEA1960_RS16405 PF13537 Glutamine amidotransferase domain SEEA1960_RS16450 PF01494 FAD binding domain SEEA1960_RS16455 PF01938 TRAM domain SEEA1960_RS16455 PF00919 Uncharacterized protein family UPF0004 SEEA1960_RS16455 PF04055 Radical SAM superfamily SEEA1960_RS16460 PF02562 PhoH-like protein SEEA1960_RS16465 PF02130 Uncharacterized protein family UPF0054 SEEA1960_RS16470 PF03471 Transporter associated domain SEEA1960_RS16470 PF00571 CBS domain SEEA1960_RS16475 PF00795 Carbon-nitrogen hydrolase SEEA1960_RS16480 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS16485 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS16490 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS16495 PF00005 ABC transporter SEEA1960_RS16500 PF01156 Inosine-uridine preferring nucleoside hydrolase SEEA1960_RS16510 PF00012 Hsp70 protein SEEA1960_RS16520 PF06889 Protein of unknown function (DUF1266) SEEA1960_RS16530 PF06889 Protein of unknown function (DUF1266) SEEA1960_RS16540 PF07295 Zinc-ribbon containing domain SEEA1960_RS16545 PF00158 Sigma-54 interaction domain SEEA1960_RS16545 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS16545 PF00989 PAS fold SEEA1960_RS16550 PF03812 2-keto-3-deoxygluconate permease SEEA1960_RS16555 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SEEA1960_RS16565 PF13603 Leucyl-tRNA synthetase, Domain 2 SEEA1960_RS16565 PF00133 tRNA synthetases class I (I, L, M and V) SEEA1960_RS16565 PF08264 Anticodon-binding domain of tRNA SEEA1960_RS16570 PF04390 Lipopolysaccharide-assembly SEEA1960_RS16575 PF06144 DNA polymerase III, delta subunit SEEA1960_RS16575 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SEEA1960_RS16580 PF01467 Cytidylyltransferase-like SEEA1960_RS16585 PF00155 Aminotransferase class I and II SEEA1960_RS16590 PF00300 Histidine phosphatase superfamily (branch 1) SEEA1960_RS16600 PF02590 Predicted SPOUT methyltransferase SEEA1960_RS16605 PF03717 Penicillin-binding Protein dimerisation domain SEEA1960_RS16605 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS16610 PF01098 Cell cycle protein SEEA1960_RS16615 PF05036 Sporulation related domain SEEA1960_RS16615 PF03330 Lytic transglycolase SEEA1960_RS16620 PF00768 D-alanyl-D-alanine carboxypeptidase SEEA1960_RS16620 PF07943 Penicillin-binding protein 5, C-terminal domain SEEA1960_RS16625 PF04359 Protein of unknown function (DUF493) SEEA1960_RS16630 PF03099 Biotin/lipoate A/B protein ligase family SEEA1960_RS16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS16635 PF03466 LysR substrate binding domain SEEA1960_RS16640 PF04055 Radical SAM superfamily SEEA1960_RS16640 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SEEA1960_RS16645 PF02416 mttA/Hcf106 family SEEA1960_RS16650 PF00795 Carbon-nitrogen hydrolase SEEA1960_RS16655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SEEA1960_RS16660 PF00313 'Cold-shock' DNA-binding domain SEEA1960_RS16665 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP SEEA1960_RS16670 PF03606 C4-dicarboxylate anaerobic carrier SEEA1960_RS16675 PF00072 Response regulator receiver domain SEEA1960_RS16675 PF12431 Transcriptional regulator SEEA1960_RS16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS16680 PF17203 Single cache domain 3 SEEA1960_RS16680 PF00989 PAS fold SEEA1960_RS16680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SEEA1960_RS16685 PF08218 Citrate lyase ligase C-terminal domain SEEA1960_RS16690 PF06857 Malonate decarboxylase delta subunit (MdcD) SEEA1960_RS16695 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEA1960_RS16700 PF04223 Citrate lyase, alpha subunit (CitF) SEEA1960_RS16705 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SEEA1960_RS16710 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEA1960_RS16715 PF00939 Sodium:sulfate symporter transmembrane region SEEA1960_RS16720 PF00445 Ribonuclease T2 family SEEA1960_RS16730 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEA1960_RS16730 PF14760 Rnk N-terminus SEEA1960_RS16735 PF13823 Alcohol dehydrogenase GroES-associated SEEA1960_RS16735 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS16735 PF00107 Zinc-binding dehydrogenase SEEA1960_RS16740 PF00582 Universal stress protein family SEEA1960_RS16750 PF13247 4Fe-4S dicluster domain SEEA1960_RS16755 PF00384 Molybdopterin oxidoreductase SEEA1960_RS16755 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS16755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS16765 PF13192 Thioredoxin domain SEEA1960_RS16765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS16770 PF10417 C-terminal domain of 1-Cys peroxiredoxin SEEA1960_RS16770 PF00578 AhpC/TSA family SEEA1960_RS16775 PF13098 Thioredoxin-like domain SEEA1960_RS16785 PF03466 LysR substrate binding domain SEEA1960_RS16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS16790 PF11922 Domain of unknown function (DUF3440) SEEA1960_RS16790 PF01507 Phosphoadenosine phosphosulfate reductase family SEEA1960_RS16795 PF02195 ParB-like nuclease domain SEEA1960_RS16800 PF00155 Aminotransferase class I and II SEEA1960_RS16805 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS16810 PF04328 Selenoprotein, putative SEEA1960_RS16815 PF02554 Carbon starvation protein CstA SEEA1960_RS16815 PF13722 5TM C-terminal transporter carbon starvation CstA SEEA1960_RS16820 PF03061 Thioesterase superfamily SEEA1960_RS16830 PF00550 Phosphopantetheine attachment site SEEA1960_RS16830 PF00857 Isochorismatase family SEEA1960_RS16835 PF00501 AMP-binding enzyme SEEA1960_RS16835 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS16840 PF00425 chorismate binding enzyme SEEA1960_RS16845 PF01497 Periplasmic binding protein SEEA1960_RS16850 PF05977 Transmembrane secretion effector SEEA1960_RS16855 PF01032 FecCD transport family SEEA1960_RS16860 PF01032 FecCD transport family SEEA1960_RS16865 PF00005 ABC transporter SEEA1960_RS16870 PF02706 Chain length determinant protein SEEA1960_RS16875 PF00501 AMP-binding enzyme SEEA1960_RS16875 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS16875 PF00975 Thioesterase domain SEEA1960_RS16875 PF00668 Condensation domain SEEA1960_RS16875 PF00550 Phosphopantetheine attachment site SEEA1960_RS16880 PF03621 MbtH-like protein SEEA1960_RS16885 PF11806 Domain of unknown function (DUF3327) SEEA1960_RS16885 PF00756 Putative esterase SEEA1960_RS16890 PF00593 TonB dependent receptor SEEA1960_RS16890 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS16895 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SEEA1960_RS16895 PF01648 4'-phosphopantetheinyl transferase superfamily SEEA1960_RS16900 PF04107 Glutamate-cysteine ligase family 2(GCS2) SEEA1960_RS16905 PF06643 Protein of unknown function (DUF1158) SEEA1960_RS16910 PF12833 Helix-turn-helix domain SEEA1960_RS16915 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS16915 PF16295 Tetracyclin repressor-like, C-terminal domain SEEA1960_RS16920 PF04237 YjbR SEEA1960_RS16925 PF00881 Nitroreductase family SEEA1960_RS16935 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS16945 PF03613 PTS system mannose/fructose/sorbose family IID component SEEA1960_RS16955 PF01380 SIS domain SEEA1960_RS16960 PF03610 PTS system fructose IIA component SEEA1960_RS16960 PF00158 Sigma-54 interaction domain SEEA1960_RS16960 PF00874 PRD domain SEEA1960_RS16965 PF03797 Autotransporter beta-domain SEEA1960_RS16965 PF00657 GDSL-like Lipase/Acylhydrolase SEEA1960_RS16975 PF00924 Mechanosensitive ion channel SEEA1960_RS16980 PF00324 Amino acid permease SEEA1960_RS16990 PF04224 Protein of unknown function, DUF417 SEEA1960_RS16995 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS17000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEA1960_RS17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS17005 PF12833 Helix-turn-helix domain SEEA1960_RS17005 PF12852 Cupin SEEA1960_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS17015 PF00672 HAMP domain SEEA1960_RS17015 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS17025 PF04138 GtrA-like protein SEEA1960_RS17030 PF00535 Glycosyl transferase family 2 SEEA1960_RS17040 PF13683 Integrase core domain SEEA1960_RS17040 PF13276 HTH-like domain SEEA1960_RS17045 PF01527 Transposase SEEA1960_RS17060 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS17075 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS17075 PF00072 Response regulator receiver domain SEEA1960_RS17080 PF00419 Fimbrial protein SEEA1960_RS17085 PF00419 Fimbrial protein SEEA1960_RS17090 PF00577 Outer membrane usher protein SEEA1960_RS17090 PF13954 PapC N-terminal domain SEEA1960_RS17090 PF13953 PapC C-terminal domain SEEA1960_RS17095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS17095 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS17105 PF00419 Fimbrial protein SEEA1960_RS17115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SEEA1960_RS17115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SEEA1960_RS17125 PF04307 LexA-binding, inner membrane-associated putative hydrolase SEEA1960_RS17140 PF01406 tRNA synthetases class I (C) catalytic domain SEEA1960_RS17140 PF09190 DALR domain SEEA1960_RS17145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SEEA1960_RS17150 PF12850 Calcineurin-like phosphoesterase superfamily domain SEEA1960_RS17160 PF00731 AIR carboxylase SEEA1960_RS17165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SEEA1960_RS17165 PF02222 ATP-grasp domain SEEA1960_RS17170 PF00696 Amino acid kinase family SEEA1960_RS17175 PF11392 Protein of unknown function (DUF2877) SEEA1960_RS17180 PF06545 Protein of unknown function (DUF1116) SEEA1960_RS17185 PF00549 CoA-ligase SEEA1960_RS17185 PF02629 CoA binding domain SEEA1960_RS17190 PF02615 Malate/L-lactate dehydrogenase SEEA1960_RS17195 PF01546 Peptidase family M20/M25/M40 SEEA1960_RS17200 PF05899 Protein of unknown function (DUF861) SEEA1960_RS17200 PF07883 Cupin domain SEEA1960_RS17205 PF02595 Glycerate kinase family SEEA1960_RS17210 PF00860 Permease family SEEA1960_RS17215 PF01979 Amidohydrolase family SEEA1960_RS17220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SEEA1960_RS17230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEA1960_RS17230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEA1960_RS17235 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS17240 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS17240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS17240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS17245 PF09339 IclR helix-turn-helix domain SEEA1960_RS17245 PF01614 Bacterial transcriptional regulator SEEA1960_RS17250 PF04115 Ureidoglycolate lyase SEEA1960_RS17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS17255 PF03466 LysR substrate binding domain SEEA1960_RS17265 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS17270 PF00005 ABC transporter SEEA1960_RS17270 PF09383 NIL domain SEEA1960_RS17275 PF03180 NLPA lipoprotein SEEA1960_RS17290 PF00005 ABC transporter SEEA1960_RS17295 PF13472 GDSL-like Lipase/Acylhydrolase family SEEA1960_RS17300 PF00106 short chain dehydrogenase SEEA1960_RS17305 PF00085 Thioredoxin SEEA1960_RS17310 PF03649 Uncharacterised protein family (UPF0014) SEEA1960_RS17315 PF00005 ABC transporter SEEA1960_RS17320 PF01145 SPFH domain / Band 7 family SEEA1960_RS17320 PF16200 C-terminal region of band_7 SEEA1960_RS17325 PF01957 NfeD-like C-terminal, partner-binding SEEA1960_RS17330 PF13411 MerR HTH family regulatory protein SEEA1960_RS17335 PF00403 Heavy-metal-associated domain SEEA1960_RS17345 PF01963 TraB family SEEA1960_RS17350 PF04073 Aminoacyl-tRNA editing domain SEEA1960_RS17355 PF02872 5'-nucleotidase, C-terminal domain SEEA1960_RS17355 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS17360 PF07690 Major Facilitator Superfamily SEEA1960_RS17365 PF00999 Sodium/hydrogen exchanger family SEEA1960_RS17365 PF02254 TrkA-N domain SEEA1960_RS17370 PF00294 pfkB family carbohydrate kinase SEEA1960_RS17375 PF07859 alpha/beta hydrolase fold SEEA1960_RS17380 PF00762 Ferrochelatase SEEA1960_RS17385 PF05191 Adenylate kinase, active site lid SEEA1960_RS17395 PF00183 Hsp90 protein SEEA1960_RS17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS17400 PF02132 RecR protein SEEA1960_RS17400 PF13662 Toprim domain SEEA1960_RS17405 PF02575 YbaB/EbfC DNA-binding family SEEA1960_RS17410 PF12170 DNA polymerase III tau subunit V interacting with alpha SEEA1960_RS17410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SEEA1960_RS17410 PF12169 DNA polymerase III subunits gamma and tau domain III SEEA1960_RS17415 PF00156 Phosphoribosyl transferase domain SEEA1960_RS17425 PF04304 Protein of unknown function (DUF454) SEEA1960_RS17430 PF07445 Primosomal replication protein priC SEEA1960_RS17435 PF10689 Protein of unknown function (DUF2496) SEEA1960_RS17440 PF04754 Putative transposase, YhgA-like SEEA1960_RS17445 PF12794 Mechanosensitive ion channel inner membrane domain 1 SEEA1960_RS17445 PF00924 Mechanosensitive ion channel SEEA1960_RS17445 PF12795 Mechanosensitive ion channel porin domain SEEA1960_RS17450 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS17450 PF08361 MAATS-type transcriptional repressor, C-terminal region SEEA1960_RS17455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS17455 PF00529 HlyD membrane-fusion protein of T1SS SEEA1960_RS17460 PF00873 AcrB/AcrD/AcrF family SEEA1960_RS17465 PF10757 Biofilm formation regulator YbaJ SEEA1960_RS17470 PF05321 Haemolysin expression modulating protein SEEA1960_RS17475 PF12464 Maltose acetyltransferase SEEA1960_RS17475 PF14602 Hexapeptide repeat of succinyl-transferase SEEA1960_RS17480 PF10777 Inner membrane protein YlaC SEEA1960_RS17485 PF00444 Ribosomal protein L36 SEEA1960_RS17490 PF01197 Ribosomal protein L31 SEEA1960_RS17495 PF12792 CSS motif domain associated with EAL SEEA1960_RS17495 PF00563 EAL domain SEEA1960_RS17505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEA1960_RS17510 PF09619 Type III secretion system lipoprotein chaperone (YscW) SEEA1960_RS17520 PF00909 Ammonium Transporter Family SEEA1960_RS17525 PF00543 Nitrogen regulatory protein P-II SEEA1960_RS17530 PF00664 ABC transporter transmembrane region SEEA1960_RS17530 PF00005 ABC transporter SEEA1960_RS17535 PF00005 ABC transporter SEEA1960_RS17535 PF00664 ABC transporter transmembrane region SEEA1960_RS17540 PF13404 AsnC-type helix-turn-helix domain SEEA1960_RS17540 PF01037 Lrp/AsnC ligand binding domain SEEA1960_RS17555 PF12793 Sugar transport-related sRNA regulator N-term SEEA1960_RS17555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS17560 PF06508 Queuosine biosynthesis protein QueC SEEA1960_RS17575 PF13145 PPIC-type PPIASE domain SEEA1960_RS17580 PF00216 Bacterial DNA-binding protein SEEA1960_RS17585 PF05362 Lon protease (S16) C-terminal proteolytic domain SEEA1960_RS17585 PF02190 ATP-dependent protease La (LON) substrate-binding domain SEEA1960_RS17585 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS17590 PF07724 AAA domain (Cdc48 subfamily) SEEA1960_RS17590 PF06689 ClpX C4-type zinc finger SEEA1960_RS17590 PF10431 C-terminal, D2-small domain, of ClpB protein SEEA1960_RS17595 PF00574 Clp protease SEEA1960_RS17600 PF05697 Bacterial trigger factor protein (TF) SEEA1960_RS17600 PF05698 Bacterial trigger factor protein (TF) C-terminus SEEA1960_RS17600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEA1960_RS17610 PF01722 BolA-like protein SEEA1960_RS17620 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SEEA1960_RS17620 PF03923 Uncharacterized lipoprotein SEEA1960_RS17625 PF07690 Major Facilitator Superfamily SEEA1960_RS17630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SEEA1960_RS17630 PF06481 COX Aromatic Rich Motif SEEA1960_RS17635 PF00115 Cytochrome C and Quinol oxidase polypeptide I SEEA1960_RS17640 PF00510 Cytochrome c oxidase subunit III SEEA1960_RS17645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SEEA1960_RS17650 PF01040 UbiA prenyltransferase family SEEA1960_RS17670 PF07690 Major Facilitator Superfamily SEEA1960_RS17675 PF04461 Protein of unknown function (DUF520) SEEA1960_RS17680 PF08546 Ketopantoate reductase PanE/ApbA C terminal SEEA1960_RS17680 PF02558 Ketopantoate reductase PanE/ApbA SEEA1960_RS17685 PF01965 DJ-1/PfpI family SEEA1960_RS17695 PF00266 Aminotransferase class-V SEEA1960_RS17700 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS17700 PF07702 UTRA domain SEEA1960_RS17705 PF01547 Bacterial extracellular solute-binding protein SEEA1960_RS17710 PF00005 ABC transporter SEEA1960_RS17710 PF08402 TOBE domain SEEA1960_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS17725 PF02568 Thiamine biosynthesis protein (ThiI) SEEA1960_RS17725 PF02926 THUMP domain SEEA1960_RS17730 PF02609 Exonuclease VII small subunit SEEA1960_RS17735 PF00348 Polyprenyl synthetase SEEA1960_RS17740 PF02780 Transketolase, C-terminal domain SEEA1960_RS17740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SEEA1960_RS17740 PF02779 Transketolase, pyrimidine binding domain SEEA1960_RS17745 PF00248 Aldo/keto reductase family SEEA1960_RS17750 PF04608 Phosphatidylglycerophosphatase A SEEA1960_RS17755 PF00586 AIR synthase related protein, N-terminal domain SEEA1960_RS17755 PF02769 AIR synthase related protein, C-terminal domain SEEA1960_RS17760 PF01029 NusB family SEEA1960_RS17765 PF00885 6,7-dimethyl-8-ribityllumazine synthase SEEA1960_RS17770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SEEA1960_RS17770 PF01872 RibD C-terminal domain SEEA1960_RS17775 PF03477 ATP cone domain SEEA1960_RS17780 PF11622 Protein of unknown function (DUF3251) SEEA1960_RS17785 PF03502 Nucleoside-specific channel-forming protein, Tsx SEEA1960_RS17800 PF01844 HNH endonuclease SEEA1960_RS17805 PF02355 Protein export membrane protein SEEA1960_RS17805 PF07549 SecD/SecF GG Motif SEEA1960_RS17810 PF13721 SecD export protein N-terminal TM region SEEA1960_RS17810 PF07549 SecD/SecF GG Motif SEEA1960_RS17810 PF02355 Protein export membrane protein SEEA1960_RS17815 PF02699 Preprotein translocase subunit SEEA1960_RS17820 PF01702 Queuine tRNA-ribosyltransferase SEEA1960_RS17830 PF02547 Queuosine biosynthesis protein SEEA1960_RS17835 PF04336 Acyl carrier protein phosphodiesterase SEEA1960_RS17840 PF10417 C-terminal domain of 1-Cys peroxiredoxin SEEA1960_RS17840 PF00578 AhpC/TSA family SEEA1960_RS17845 PF00128 Alpha amylase, catalytic domain SEEA1960_RS17845 PF02903 Alpha amylase, N-terminal ig-like domain SEEA1960_RS17850 PF00324 Amino acid permease SEEA1960_RS17855 PF05525 Branched-chain amino acid transport protein SEEA1960_RS17860 PF00989 PAS fold SEEA1960_RS17860 PF11808 Phosphate regulon sensor protein PhoR SEEA1960_RS17860 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS17865 PF00072 Response regulator receiver domain SEEA1960_RS17865 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS17870 PF12320 Type 5 capsule protein repressor C-terminal domain SEEA1960_RS17870 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS17875 PF13476 AAA domain SEEA1960_RS17880 PF07690 Major Facilitator Superfamily SEEA1960_RS17885 PF00480 ROK family SEEA1960_RS17890 PF04381 Putative exonuclease, RdgC SEEA1960_RS17895 PF06865 Pyrimidine/purine nucleoside phosphorylase SEEA1960_RS17900 PF07302 AroM protein SEEA1960_RS17905 PF16362 YaiA protein SEEA1960_RS17910 PF01202 Shikimate kinase SEEA1960_RS17915 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SEEA1960_RS17920 PF14748 Pyrroline-5-carboxylate reductase dimerisation SEEA1960_RS17920 PF03807 NADP oxidoreductase coenzyme F420-dependent SEEA1960_RS17925 PF05230 MASE2 domain SEEA1960_RS17925 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS17930 PF07769 psiF repeat SEEA1960_RS17940 PF10796 Sigma-S stabilisation anti-adaptor protein SEEA1960_RS17945 PF07690 Major Facilitator Superfamily SEEA1960_RS17955 PF01820 D-ala D-ala ligase N-terminus SEEA1960_RS17955 PF07478 D-ala D-ala ligase C-terminus SEEA1960_RS17960 PF10953 Protein of unknown function (DUF2754) SEEA1960_RS17965 PF10954 Protein of unknown function (DUF2755) SEEA1960_RS17970 PF07759 Protein of unknown function (DUF1615) SEEA1960_RS17975 PF05992 SbmA/BacA-like family SEEA1960_RS17985 PF00144 Beta-lactamase SEEA1960_RS17990 PF15977 Winged helix-turn-helix DNA binding SEEA1960_RS17995 PF03797 Autotransporter beta-domain SEEA1960_RS18000 PF00490 Delta-aminolevulinic acid dehydratase SEEA1960_RS18005 PF00501 AMP-binding enzyme SEEA1960_RS18005 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS18005 PF16177 Acetyl-coenzyme A synthetase N-terminus SEEA1960_RS18010 PF03972 MmgE/PrpD family SEEA1960_RS18015 PF00285 Citrate synthase, C-terminal domain SEEA1960_RS18025 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS18025 PF06506 Propionate catabolism activator SEEA1960_RS18025 PF00158 Sigma-54 interaction domain SEEA1960_RS18030 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS18035 PF01810 LysE type translocator SEEA1960_RS18040 PF00593 TonB dependent receptor SEEA1960_RS18040 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS18055 PF02322 Cytochrome bd terminal oxidase subunit II SEEA1960_RS18060 PF01654 Cytochrome bd terminal oxidase subunit I SEEA1960_RS18065 PF04851 Type III restriction enzyme, res subunit SEEA1960_RS18065 PF08774 VRR-NUC domain SEEA1960_RS18070 PF01555 DNA methylase SEEA1960_RS18070 PF18273 Type III R-M EcoP15I C-terminal domain SEEA1960_RS18075 PF07690 Major Facilitator Superfamily SEEA1960_RS18085 PF09278 MerR, DNA binding SEEA1960_RS18085 PF00376 MerR family regulatory protein SEEA1960_RS18090 PF00403 Heavy-metal-associated domain SEEA1960_RS18095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEA1960_RS18100 PF00873 AcrB/AcrD/AcrF family SEEA1960_RS18105 PF02321 Outer membrane efflux protein SEEA1960_RS18125 PF13505 Outer membrane protein beta-barrel domain SEEA1960_RS18140 PF00563 EAL domain SEEA1960_RS18140 PF12792 CSS motif domain associated with EAL SEEA1960_RS18160 PF16970 Type-1 fimbrial protein, A SEEA1960_RS18165 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS18165 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS18170 PF00577 Outer membrane usher protein SEEA1960_RS18170 PF13954 PapC N-terminal domain SEEA1960_RS18170 PF13953 PapC C-terminal domain SEEA1960_RS18180 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS18180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS18190 PF03466 LysR substrate binding domain SEEA1960_RS18195 PF00561 alpha/beta hydrolase fold SEEA1960_RS18200 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEA1960_RS18205 PF00694 Aconitase C-terminal domain SEEA1960_RS18210 PF00330 Aconitase family (aconitate hydratase) SEEA1960_RS18215 PF07690 Major Facilitator Superfamily SEEA1960_RS18220 PF08986 Domain of unknown function (DUF1889) SEEA1960_RS18225 PF18427 DD-reactivating factor swiveling domain SEEA1960_RS18225 PF08841 Diol dehydratase reactivase ATPase-like domain SEEA1960_RS18230 PF08841 Diol dehydratase reactivase ATPase-like domain SEEA1960_RS18230 PF18427 DD-reactivating factor swiveling domain SEEA1960_RS18245 PF13356 Arm DNA-binding domain SEEA1960_RS18245 PF00589 Phage integrase family SEEA1960_RS18275 PF06755 CbtA_toxin of type IV toxin-antitoxin system SEEA1960_RS18280 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SEEA1960_RS18285 PF06174 Protein of unknown function (DUF987) SEEA1960_RS18290 PF04002 RadC-like JAB domain SEEA1960_RS18295 PF06067 Domain of unknown function (DUF932) SEEA1960_RS18300 PF06006 Bacterial protein of unknown function (DUF905) SEEA1960_RS18320 PF13280 WYL domain SEEA1960_RS18320 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS18340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SEEA1960_RS18340 PF12008 Type I restriction and modification enzyme - subunit R C terminal SEEA1960_RS18340 PF18766 SWI2/SNF2 ATPase SEEA1960_RS18345 PF01420 Type I restriction modification DNA specificity domain SEEA1960_RS18350 PF02384 N-6 DNA Methylase SEEA1960_RS18350 PF12161 HsdM N-terminal domain SEEA1960_RS18360 PF13148 Protein of unknown function (DUF3987) SEEA1960_RS18380 PF00171 Aldehyde dehydrogenase family SEEA1960_RS18385 PF01472 PUA domain SEEA1960_RS18385 PF00696 Amino acid kinase family SEEA1960_RS18390 PF00267 Gram-negative porin SEEA1960_RS18395 PF07417 Sigma factor-binding transcriptional regulator Crl SEEA1960_RS18400 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) SEEA1960_RS18405 PF00156 Phosphoribosyl transferase domain SEEA1960_RS18410 PF07687 Peptidase dimerisation domain SEEA1960_RS18410 PF01546 Peptidase family M20/M25/M40 SEEA1960_RS18415 PF00472 RF-1 domain SEEA1960_RS18425 PF00817 impB/mucB/samB family SEEA1960_RS18425 PF11798 IMS family HHH motif SEEA1960_RS18425 PF11799 impB/mucB/samB family C-terminal domain SEEA1960_RS18430 PF03734 L,D-transpeptidase catalytic domain SEEA1960_RS18435 PF13230 Glutamine amidotransferases class-II SEEA1960_RS18440 PF13580 SIS domain SEEA1960_RS18445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS18445 PF09317 Domain of unknown function (DUF1974) SEEA1960_RS18445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEA1960_RS18445 PF02770 Acyl-CoA dehydrogenase, middle domain SEEA1960_RS18450 PF00795 Carbon-nitrogen hydrolase SEEA1960_RS18465 PF13505 Outer membrane protein beta-barrel domain SEEA1960_RS18475 PF03466 LysR substrate binding domain SEEA1960_RS18475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS18500 PF13953 PapC C-terminal domain SEEA1960_RS18500 PF13954 PapC N-terminal domain SEEA1960_RS18500 PF00577 Outer membrane usher protein SEEA1960_RS18560 PF05593 RHS Repeat SEEA1960_RS18560 PF03527 RHS protein SEEA1960_RS18570 PF04717 Type VI secretion system, phage-baseplate injector SEEA1960_RS18570 PF06715 Gp5 C-terminal repeat (3 copies) SEEA1960_RS18595 PF14331 ImcF-related N-terminal domain SEEA1960_RS18595 PF06744 Type VI secretion protein IcmF C-terminal SEEA1960_RS18595 PF06761 Intracellular multiplication and human macrophage-killing SEEA1960_RS18615 PF05736 OprF membrane domain SEEA1960_RS18615 PF00691 OmpA family SEEA1960_RS18620 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE SEEA1960_RS18660 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath SEEA1960_RS18665 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 SEEA1960_RS18670 PF17871 AAA lid domain SEEA1960_RS18670 PF10431 C-terminal, D2-small domain, of ClpB protein SEEA1960_RS18670 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS18670 PF07724 AAA domain (Cdc48 subfamily) SEEA1960_RS18685 PF04965 Gene 25-like lysozyme SEEA1960_RS18690 PF05947 Type VI secretion system, TssF SEEA1960_RS18710 PF00929 Exonuclease SEEA1960_RS18715 PF00075 RNase H SEEA1960_RS18720 PF08241 Methyltransferase domain SEEA1960_RS18725 PF00753 Metallo-beta-lactamase superfamily SEEA1960_RS18725 PF16123 Hydroxyacylglutathione hydrolase C-terminus SEEA1960_RS18730 PF01464 Transglycosylase SLT domain SEEA1960_RS18730 PF01476 LysM domain SEEA1960_RS18735 PF08241 Methyltransferase domain SEEA1960_RS18740 PF03372 Endonuclease/Exonuclease/phosphatase family SEEA1960_RS18745 PF07690 Major Facilitator Superfamily SEEA1960_RS18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS18750 PF03466 LysR substrate binding domain SEEA1960_RS18755 PF00248 Aldo/keto reductase family SEEA1960_RS18795 PF00005 ABC transporter SEEA1960_RS18795 PF09383 NIL domain SEEA1960_RS18800 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS18805 PF03180 NLPA lipoprotein SEEA1960_RS18810 PF16358 RcsF lipoprotein SEEA1960_RS18815 PF18389 TrmO C-terminal domain SEEA1960_RS18815 PF01980 tRNA-methyltransferase O SEEA1960_RS18820 PF04073 Aminoacyl-tRNA editing domain SEEA1960_RS18820 PF03129 Anticodon binding domain SEEA1960_RS18820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEA1960_RS18825 PF17185 NlpE C-terminal OB domain SEEA1960_RS18825 PF04170 NlpE N-terminal domain SEEA1960_RS18830 PF00472 RF-1 domain SEEA1960_RS18835 PF07152 YaeQ protein SEEA1960_RS18840 PF06786 Uncharacterised protein family (UPF0253) SEEA1960_RS18845 PF07073 Modulator of Rho-dependent transcription termination (ROF) SEEA1960_RS18850 PF11734 TilS substrate C-terminal domain SEEA1960_RS18850 PF01171 PP-loop family SEEA1960_RS18850 PF09179 TilS substrate binding domain SEEA1960_RS18855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SEEA1960_RS18860 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEA1960_RS18860 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEA1960_RS18860 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEA1960_RS18865 PF18416 N-acetylglucosamine binding protein domain 2 SEEA1960_RS18865 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SEEA1960_RS18870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SEEA1960_RS18875 PF14579 Helix-hairpin-helix motif SEEA1960_RS18875 PF02811 PHP domain SEEA1960_RS18875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SEEA1960_RS18875 PF01336 OB-fold nucleic acid binding domain SEEA1960_RS18875 PF07733 Bacterial DNA polymerase III alpha NTPase domain SEEA1960_RS18880 PF01351 Ribonuclease HII SEEA1960_RS18885 PF02684 Lipid-A-disaccharide synthetase SEEA1960_RS18890 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS18890 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SEEA1960_RS18895 PF07977 FabA-like domain SEEA1960_RS18900 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SEEA1960_RS18900 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS18905 PF03938 Outer membrane protein (OmpH-like) SEEA1960_RS18910 PF07244 Surface antigen variable number repeat SEEA1960_RS18910 PF01103 Surface antigen SEEA1960_RS18915 PF17820 PDZ domain SEEA1960_RS18915 PF02163 Peptidase family M50 SEEA1960_RS18925 PF01255 Putative undecaprenyl diphosphate synthase SEEA1960_RS18935 PF13288 DXP reductoisomerase C-terminal domain SEEA1960_RS18935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SEEA1960_RS18935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SEEA1960_RS18940 PF01765 Ribosome recycling factor SEEA1960_RS18945 PF00696 Amino acid kinase family SEEA1960_RS18950 PF00889 Elongation factor TS SEEA1960_RS18960 PF00318 Ribosomal protein S2 SEEA1960_RS18965 PF00557 Metallopeptidase family M24 SEEA1960_RS18970 PF01909 Nucleotidyltransferase domain SEEA1960_RS18970 PF01842 ACT domain SEEA1960_RS18970 PF08335 GlnD PII-uridylyltransferase SEEA1960_RS18970 PF01966 HD domain SEEA1960_RS18975 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SEEA1960_RS18975 PF14602 Hexapeptide repeat of succinyl-transferase SEEA1960_RS18975 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS18980 PF07690 Major Facilitator Superfamily SEEA1960_RS18980 PF00083 Sugar (and other) transporter SEEA1960_RS18985 PF11944 Protein of unknown function (DUF3461) SEEA1960_RS18990 PF13556 PucR C-terminal helix-turn-helix domain SEEA1960_RS18990 PF17853 GGDEF-like domain SEEA1960_RS18990 PF05651 Putative sugar diacid recognition SEEA1960_RS18995 PF00595 PDZ domain SEEA1960_RS19000 PF01966 HD domain SEEA1960_RS19000 PF13286 Phosphohydrolase-associated domain SEEA1960_RS19005 PF01048 Phosphorylase superfamily SEEA1960_RS19010 PF01497 Periplasmic binding protein SEEA1960_RS19015 PF03458 UPF0126 domain SEEA1960_RS19020 PF01521 Iron-sulphur cluster biosynthesis SEEA1960_RS19025 PF00654 Voltage gated chloride channel SEEA1960_RS19030 PF00202 Aminotransferase class-III SEEA1960_RS19035 PF11245 Protein of unknown function (DUF2544) SEEA1960_RS19040 PF00419 Fimbrial protein SEEA1960_RS19045 PF00419 Fimbrial protein SEEA1960_RS19050 PF00419 Fimbrial protein SEEA1960_RS19055 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS19055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS19060 PF00577 Outer membrane usher protein SEEA1960_RS19060 PF13954 PapC N-terminal domain SEEA1960_RS19060 PF13953 PapC C-terminal domain SEEA1960_RS19075 PF01032 FecCD transport family SEEA1960_RS19080 PF01497 Periplasmic binding protein SEEA1960_RS19085 PF00005 ABC transporter SEEA1960_RS19090 PF00593 TonB dependent receptor SEEA1960_RS19090 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS19095 PF14814 Bifunctional transglycosylase second domain SEEA1960_RS19095 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS19095 PF00912 Transglycosylase SEEA1960_RS19095 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal SEEA1960_RS19100 PF08482 ATP-dependent helicase C-terminal SEEA1960_RS19100 PF04408 Helicase associated domain (HA2) SEEA1960_RS19100 PF00270 DEAD/DEAH box helicase SEEA1960_RS19100 PF00271 Helicase conserved C-terminal domain SEEA1960_RS19105 PF02834 LigT like Phosphoesterase SEEA1960_RS19110 PF03749 Sugar fermentation stimulation protein RE domain SEEA1960_RS19110 PF17746 SfsA N-terminal OB domain SEEA1960_RS19115 PF01258 Prokaryotic dksA/traR C4-type zinc finger SEEA1960_RS19120 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEA1960_RS19125 PF01743 Poly A polymerase head domain SEEA1960_RS19125 PF12626 Polymerase A arginine-rich C-terminus SEEA1960_RS19125 PF12627 Probable RNA and SrmB- binding site of polymerase A SEEA1960_RS19130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SEEA1960_RS19135 PF02548 Ketopantoate hydroxymethyltransferase SEEA1960_RS19140 PF02569 Pantoate-beta-alanine ligase SEEA1960_RS19150 PF02261 Aspartate decarboxylase SEEA1960_RS19160 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS19160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS19165 PF13953 PapC C-terminal domain SEEA1960_RS19165 PF13954 PapC N-terminal domain SEEA1960_RS19165 PF00577 Outer membrane usher protein SEEA1960_RS19170 PF00419 Fimbrial protein SEEA1960_RS19190 PF01522 Polysaccharide deacetylase SEEA1960_RS19195 PF03610 PTS system fructose IIA component SEEA1960_RS19205 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS19205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS19210 PF13953 PapC C-terminal domain SEEA1960_RS19210 PF00577 Outer membrane usher protein SEEA1960_RS19210 PF13954 PapC N-terminal domain SEEA1960_RS19215 PF00419 Fimbrial protein SEEA1960_RS19220 PF01061 ABC-2 type transporter SEEA1960_RS19225 PF00005 ABC transporter SEEA1960_RS19230 PF00484 Carbonic anhydrase SEEA1960_RS19235 PF00156 Phosphoribosyl transferase domain SEEA1960_RS19240 PF01011 PQQ enzyme repeat SEEA1960_RS19245 PF07732 Multicopper oxidase SEEA1960_RS19245 PF00394 Multicopper oxidase SEEA1960_RS19245 PF07731 Multicopper oxidase SEEA1960_RS19250 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) SEEA1960_RS19255 PF17284 Spermidine synthase tetramerisation domain SEEA1960_RS19260 PF02675 S-adenosylmethionine decarboxylase SEEA1960_RS19265 PF00455 DeoR C terminal sensor domain SEEA1960_RS19265 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS19270 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SEEA1960_RS19275 PF07005 Sugar-binding N-terminal domain SEEA1960_RS19275 PF17042 Nucleotide-binding C-terminal domain SEEA1960_RS19280 PF03812 2-keto-3-deoxygluconate permease SEEA1960_RS19285 PF06062 Uncharacterised protein family (UPF0231) SEEA1960_RS19305 PF11791 Aconitate B N-terminal domain SEEA1960_RS19305 PF06434 Aconitate hydratase 2 N-terminus SEEA1960_RS19305 PF00330 Aconitase family (aconitate hydratase) SEEA1960_RS19335 PF00330 Aconitase family (aconitate hydratase) SEEA1960_RS19335 PF06434 Aconitate hydratase 2 N-terminus SEEA1960_RS19335 PF11791 Aconitate B N-terminal domain SEEA1960_RS19340 PF11737 Protein of unknown function (DUF3300) SEEA1960_RS19355 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS19355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEA1960_RS19360 PF02817 e3 binding domain SEEA1960_RS19360 PF00364 Biotin-requiring enzyme SEEA1960_RS19360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SEEA1960_RS19365 PF17831 Pyruvate dehydrogenase E1 component middle domain SEEA1960_RS19365 PF00456 Transketolase, thiamine diphosphate binding domain SEEA1960_RS19375 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS19375 PF07729 FCD domain SEEA1960_RS19380 PF00324 Amino acid permease SEEA1960_RS19390 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain SEEA1960_RS19390 PF04616 Glycosyl hydrolases family 43 SEEA1960_RS19395 PF17113 Regulatory signalling modulator protein AmpE SEEA1960_RS19400 PF01510 N-acetylmuramoyl-L-alanine amidase SEEA1960_RS19405 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SEEA1960_RS19405 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SEEA1960_RS19415 PF07963 Prokaryotic N-terminal methylation motif SEEA1960_RS19420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SEEA1960_RS19420 PF00437 Type II/IV secretion system protein SEEA1960_RS19425 PF00482 Type II secretion system (T2SS), protein F SEEA1960_RS19430 PF00478 IMP dehydrogenase / GMP reductase domain SEEA1960_RS19435 PF01121 Dephospho-CoA kinase SEEA1960_RS19440 PF07072 Cell division protein SEEA1960_RS19445 PF03884 DNA gyrase inhibitor YacG SEEA1960_RS19450 PF03466 LysR substrate binding domain SEEA1960_RS19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS19455 PF00248 Aldo/keto reductase family SEEA1960_RS19460 PF00293 NUDIX domain SEEA1960_RS19465 PF02810 SEC-C motif SEEA1960_RS19465 PF07517 SecA DEAD-like domain SEEA1960_RS19465 PF01043 SecA preprotein cross-linking domain SEEA1960_RS19465 PF07516 SecA Wing and Scaffold domain SEEA1960_RS19470 PF06558 Secretion monitor precursor protein (SecM) SEEA1960_RS19475 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SEEA1960_RS19480 PF12327 FtsZ family, C-terminal domain SEEA1960_RS19480 PF00091 Tubulin/FtsZ family, GTPase domain SEEA1960_RS19485 PF02491 SHS2 domain inserted in FTSA SEEA1960_RS19490 PF08478 POTRA domain, FtsQ-type SEEA1960_RS19490 PF03799 Cell division protein FtsQ SEEA1960_RS19495 PF07478 D-ala D-ala ligase C-terminus SEEA1960_RS19495 PF01820 D-ala D-ala ligase N-terminus SEEA1960_RS19500 PF08245 Mur ligase middle domain SEEA1960_RS19500 PF01225 Mur ligase family, catalytic domain SEEA1960_RS19500 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS19505 PF03033 Glycosyltransferase family 28 N-terminal domain SEEA1960_RS19505 PF04101 Glycosyltransferase family 28 C-terminal domain SEEA1960_RS19510 PF01098 Cell cycle protein SEEA1960_RS19515 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS19515 PF08245 Mur ligase middle domain SEEA1960_RS19520 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SEEA1960_RS19520 PF00953 Glycosyl transferase family 4 SEEA1960_RS19525 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS19525 PF08245 Mur ligase middle domain SEEA1960_RS19525 PF01225 Mur ligase family, catalytic domain SEEA1960_RS19530 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS19530 PF08245 Mur ligase middle domain SEEA1960_RS19530 PF01225 Mur ligase family, catalytic domain SEEA1960_RS19535 PF00905 Penicillin binding protein transpeptidase domain SEEA1960_RS19535 PF03717 Penicillin-binding Protein dimerisation domain SEEA1960_RS19540 PF04999 Cell division protein FtsL SEEA1960_RS19545 PF01795 MraW methylase family SEEA1960_RS19550 PF02381 MraZ protein, putative antitoxin-like SEEA1960_RS19555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEA1960_RS19555 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS19560 PF10369 Small subunit of acetolactate synthase SEEA1960_RS19565 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS19565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS19565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS19570 PF03466 LysR substrate binding domain SEEA1960_RS19575 PF08054 Leucine operon leader peptide SEEA1960_RS19580 PF08502 LeuA allosteric (dimerisation) domain SEEA1960_RS19580 PF00682 HMGL-like SEEA1960_RS19585 PF00180 Isocitrate/isopropylmalate dehydrogenase SEEA1960_RS19590 PF00330 Aconitase family (aconitate hydratase) SEEA1960_RS19595 PF00694 Aconitase C-terminal domain SEEA1960_RS19605 PF12793 Sugar transport-related sRNA regulator N-term SEEA1960_RS19605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS19615 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS19620 PF00005 ABC transporter SEEA1960_RS19625 PF09335 SNARE associated Golgi protein SEEA1960_RS19630 PF12833 Helix-turn-helix domain SEEA1960_RS19630 PF02311 AraC-like ligand binding domain SEEA1960_RS19635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS19640 PF11762 L-arabinose isomerase C-terminal domain SEEA1960_RS19640 PF02610 L-arabinose isomerase SEEA1960_RS19645 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS19665 PF00136 DNA polymerase family B SEEA1960_RS19665 PF03104 DNA polymerase family B, exonuclease domain SEEA1960_RS19670 PF18339 RapA N-terminal Tudor like domain 1 SEEA1960_RS19670 PF00176 SNF2 family N-terminal domain SEEA1960_RS19670 PF00271 Helicase conserved C-terminal domain SEEA1960_RS19670 PF18337 RapA N-terminal Tudor like domain SEEA1960_RS19670 PF12137 RNA polymerase recycling family C-terminal SEEA1960_RS19675 PF00849 RNA pseudouridylate synthase SEEA1960_RS19680 PF00226 DnaJ domain SEEA1960_RS19680 PF05099 Tellurite resistance protein TerB SEEA1960_RS19685 PF04453 LPS transport system D SEEA1960_RS19685 PF03968 OstA-like protein SEEA1960_RS19690 PF00639 PPIC-type PPIASE domain SEEA1960_RS19690 PF09312 SurA N-terminal domain SEEA1960_RS19695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SEEA1960_RS19700 PF00398 Ribosomal RNA adenine dimethylase SEEA1960_RS19705 PF04379 ApaG domain SEEA1960_RS19710 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS19715 PF00186 Dihydrofolate reductase SEEA1960_RS19720 PF02254 TrkA-N domain SEEA1960_RS19720 PF00999 Sodium/hydrogen exchanger family SEEA1960_RS19725 PF02525 Flavodoxin-like fold SEEA1960_RS19735 PF00884 Sulfatase SEEA1960_RS19755 PF06004 Bacterial protein of unknown function (DUF903) SEEA1960_RS19760 PF00083 Sugar (and other) transporter SEEA1960_RS19770 PF01494 FAD binding domain SEEA1960_RS19775 PF01012 Electron transfer flavoprotein domain SEEA1960_RS19775 PF00766 Electron transfer flavoprotein FAD-binding domain SEEA1960_RS19780 PF01012 Electron transfer flavoprotein domain SEEA1960_RS19790 PF02028 BCCT, betaine/carnitine/choline family transporter SEEA1960_RS19795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS19795 PF02770 Acyl-CoA dehydrogenase, middle domain SEEA1960_RS19795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEA1960_RS19800 PF02515 CoA-transferase family III SEEA1960_RS19805 PF00501 AMP-binding enzyme SEEA1960_RS19805 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS19810 PF00378 Enoyl-CoA hydratase/isomerase SEEA1960_RS19815 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS19820 PF07180 CaiF/GrlA transcriptional regulator SEEA1960_RS19825 PF02142 MGS-like domain SEEA1960_RS19825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SEEA1960_RS19825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SEEA1960_RS19830 PF00117 Glutamine amidotransferase class-I SEEA1960_RS19830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SEEA1960_RS19835 PF05173 Dihydrodipicolinate reductase, C-terminus SEEA1960_RS19835 PF01113 Dihydrodipicolinate reductase, N-terminus SEEA1960_RS19840 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEA1960_RS19845 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SEEA1960_RS19850 PF04223 Citrate lyase, alpha subunit (CitF) SEEA1960_RS19855 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEA1960_RS19860 PF06857 Malonate decarboxylase delta subunit (MdcD) SEEA1960_RS19865 PF08218 Citrate lyase ligase C-terminal domain SEEA1960_RS19865 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS19870 PF03390 2-hydroxycarboxylate transporter family SEEA1960_RS19875 PF04277 Oxaloacetate decarboxylase, gamma chain SEEA1960_RS19880 PF00682 HMGL-like SEEA1960_RS19880 PF02436 Conserved carboxylase domain SEEA1960_RS19880 PF00364 Biotin-requiring enzyme SEEA1960_RS19885 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SEEA1960_RS19890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS19890 PF17203 Single cache domain 3 SEEA1960_RS19895 PF12431 Transcriptional regulator SEEA1960_RS19895 PF00072 Response regulator receiver domain SEEA1960_RS19900 PF01156 Inosine-uridine preferring nucleoside hydrolase SEEA1960_RS19910 PF02401 LytB protein SEEA1960_RS19915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEA1960_RS19920 PF01252 Signal peptidase (SPase) II SEEA1960_RS19925 PF06827 Zinc finger found in FPG and IleRS SEEA1960_RS19925 PF00133 tRNA synthetases class I (I, L, M and V) SEEA1960_RS19925 PF08264 Anticodon-binding domain of tRNA SEEA1960_RS19930 PF06574 FAD synthetase SEEA1960_RS19930 PF01687 Riboflavin kinase SEEA1960_RS19935 PF10837 Protein of unknown function (DUF2575) SEEA1960_RS19940 PF01649 Ribosomal protein S20 SEEA1960_RS19950 PF01055 Glycosyl hydrolases family 31 SEEA1960_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS19955 PF03466 LysR substrate binding domain SEEA1960_RS19960 PF06965 Na+/H+ antiporter 1 SEEA1960_RS19975 PF13186 Iron-sulfur cluster-binding domain SEEA1960_RS19975 PF04055 Radical SAM superfamily SEEA1960_RS19980 PF16385 Domain of unknown function SEEA1960_RS19980 PF00884 Sulfatase SEEA1960_RS19990 PF02872 5'-nucleotidase, C-terminal domain SEEA1960_RS19990 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS20005 PF03466 LysR substrate binding domain SEEA1960_RS20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS20025 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS20025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS20030 PF16970 Type-1 fimbrial protein, A SEEA1960_RS20035 PF00419 Fimbrial protein SEEA1960_RS20040 PF00419 Fimbrial protein SEEA1960_RS20045 PF13953 PapC C-terminal domain SEEA1960_RS20045 PF13954 PapC N-terminal domain SEEA1960_RS20045 PF00577 Outer membrane usher protein SEEA1960_RS20050 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS20050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS20055 PF00419 Fimbrial protein SEEA1960_RS20070 PF00704 Glycosyl hydrolases family 18 SEEA1960_RS20090 PF03466 LysR substrate binding domain SEEA1960_RS20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS20095 PF01556 DnaJ C terminal domain SEEA1960_RS20095 PF00226 DnaJ domain SEEA1960_RS20095 PF00684 DnaJ central domain SEEA1960_RS20100 PF00012 Hsp70 protein SEEA1960_RS20105 PF10807 Protein of unknown function (DUF2541) SEEA1960_RS20110 PF03981 Ubiquinol-cytochrome C chaperone SEEA1960_RS20110 PF13099 Domain of unknown function (DUF3944) SEEA1960_RS20115 PF01184 GPR1/FUN34/yaaH family SEEA1960_RS20120 PF00994 Probable molybdopterin binding domain SEEA1960_RS20125 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEA1960_RS20130 PF01235 Sodium:alanine symporter family SEEA1960_RS20135 PF03883 Peroxide stress protein YaaA SEEA1960_RS20140 PF14821 Threonine synthase N terminus SEEA1960_RS20140 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS20145 PF00288 GHMP kinases N terminal domain SEEA1960_RS20145 PF08544 GHMP kinases C terminal SEEA1960_RS20150 PF00742 Homoserine dehydrogenase SEEA1960_RS20150 PF00696 Amino acid kinase family SEEA1960_RS20150 PF03447 Homoserine dehydrogenase, NAD binding domain SEEA1960_RS20150 PF01842 ACT domain SEEA1960_RS20150 PF13840 ACT domain SEEA1960_RS20155 PF08254 Threonine leader peptide SEEA1960_RS20160 PF00588 SpoU rRNA Methylase family SEEA1960_RS20170 PF00072 Response regulator receiver domain SEEA1960_RS20170 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS20180 PF15977 Winged helix-turn-helix DNA binding SEEA1960_RS20190 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEA1960_RS20190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS20210 PF06123 Inner membrane protein CreD SEEA1960_RS20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS20215 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS20215 PF00672 HAMP domain SEEA1960_RS20220 PF00072 Response regulator receiver domain SEEA1960_RS20220 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS20225 PF05981 CreA protein SEEA1960_RS20230 PF12833 Helix-turn-helix domain SEEA1960_RS20230 PF06445 GyrI-like small molecule binding domain SEEA1960_RS20235 PF00300 Histidine phosphatase superfamily (branch 1) SEEA1960_RS20240 PF01931 Protein of unknown function DUF84 SEEA1960_RS20245 PF01371 Trp repressor protein SEEA1960_RS20250 PF14718 Soluble lytic murein transglycosylase L domain SEEA1960_RS20250 PF01464 Transglycosylase SLT domain SEEA1960_RS20260 PF12848 ABC transporter SEEA1960_RS20260 PF00005 ABC transporter SEEA1960_RS20265 PF13521 AAA domain SEEA1960_RS20265 PF01381 Helix-turn-helix SEEA1960_RS20270 PF18073 Rubredoxin metal binding domain SEEA1960_RS20275 PF18429 Domain of unknown function (DUF5609) SEEA1960_RS20285 PF10144 Bacterial virulence factor haemolysin SEEA1960_RS20290 PF10437 Bacterial lipoate protein ligase C-terminus SEEA1960_RS20290 PF03099 Biotin/lipoate A/B protein ligase family SEEA1960_RS20305 PF06551 Protein of unknown function (DUF1120) SEEA1960_RS20310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEA1960_RS20315 PF13954 PapC N-terminal domain SEEA1960_RS20315 PF13953 PapC C-terminal domain SEEA1960_RS20315 PF00577 Outer membrane usher protein SEEA1960_RS20325 PF01048 Phosphorylase superfamily SEEA1960_RS20330 PF01676 Metalloenzyme superfamily SEEA1960_RS20335 PF00591 Glycosyl transferase family, a/b domain SEEA1960_RS20335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SEEA1960_RS20335 PF02885 Glycosyl transferase family, helical bundle domain SEEA1960_RS20340 PF01791 DeoC/LacD family aldolase SEEA1960_RS20345 PF11230 Protein of unknown function (DUF3029) SEEA1960_RS20350 PF04055 Radical SAM superfamily SEEA1960_RS20355 PF01026 TatD related DNase SEEA1960_RS20360 PF01734 Patatin-like phospholipase SEEA1960_RS20365 PF07043 Protein of unknown function (DUF1328) SEEA1960_RS20370 PF04972 BON domain SEEA1960_RS20375 PF16658 Class II release factor RF3, C-terminal domain SEEA1960_RS20375 PF03144 Elongation factor Tu domain 2 SEEA1960_RS20375 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS20380 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS20385 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS20390 PF03603 DNA polymerase III psi subunit SEEA1960_RS20395 PF08468 Methyltransferase small domain N-terminal SEEA1960_RS20395 PF05175 Methyltransferase small domain SEEA1960_RS20415 PF07256 Protein of unknown function (DUF1435) SEEA1960_RS20420 PF05230 MASE2 domain SEEA1960_RS20420 PF00990 Diguanylate cyclase, GGDEF domain SEEA1960_RS20425 PF11575 FhuF 2Fe-2S C-terminal domain SEEA1960_RS20425 PF06276 Ferric iron reductase FhuF-like transporter SEEA1960_RS20430 PF04073 Aminoacyl-tRNA editing domain SEEA1960_RS20435 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS20440 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS20445 PF06738 Putative threonine/serine exporter SEEA1960_RS20450 PF12821 Threonine/Serine exporter, ThrE SEEA1960_RS20455 PF17948 DnaT DNA-binding domain SEEA1960_RS20460 PF01695 IstB-like ATP binding protein SEEA1960_RS20465 PF10696 Protein of unknown function (DUF2501) SEEA1960_RS20470 PF00884 Sulfatase SEEA1960_RS20475 PF01380 SIS domain SEEA1960_RS20480 PF01380 SIS domain SEEA1960_RS20485 PF03613 PTS system mannose/fructose/sorbose family IID component SEEA1960_RS20490 PF03609 PTS system sorbose-specific iic component SEEA1960_RS20495 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS20505 PF00874 PRD domain SEEA1960_RS20505 PF00158 Sigma-54 interaction domain SEEA1960_RS20510 PF02203 Tar ligand binding domain homologue SEEA1960_RS20510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEA1960_RS20510 PF00672 HAMP domain SEEA1960_RS20515 PF02554 Carbon starvation protein CstA SEEA1960_RS20515 PF13722 5TM C-terminal transporter carbon starvation CstA SEEA1960_RS20520 PF04328 Selenoprotein, putative SEEA1960_RS20525 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEA1960_RS20525 PF07683 Cobalamin synthesis protein cobW C-terminal domain SEEA1960_RS20530 PF12833 Helix-turn-helix domain SEEA1960_RS20530 PF02311 AraC-like ligand binding domain SEEA1960_RS20535 PF01810 LysE type translocator SEEA1960_RS20550 PF00171 Aldehyde dehydrogenase family SEEA1960_RS20555 PF04754 Putative transposase, YhgA-like SEEA1960_RS20560 PF07690 Major Facilitator Superfamily SEEA1960_RS20565 PF04286 Protein of unknown function (DUF445) SEEA1960_RS20570 PF06779 Uncharacterised MFS-type transporter YbfB SEEA1960_RS20580 PF07670 Nucleoside recognition SEEA1960_RS20585 PF07670 Nucleoside recognition SEEA1960_RS20590 PF01979 Amidohydrolase family SEEA1960_RS20595 PF03466 LysR substrate binding domain SEEA1960_RS20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS20600 PF01177 Asp/Glu/Hydantoin racemase SEEA1960_RS20615 PF00579 tRNA synthetases class I (W and Y) SEEA1960_RS20620 PF07729 FCD domain SEEA1960_RS20620 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS20630 PF01738 Dienelactone hydrolase family SEEA1960_RS20635 PF03625 Domain of unknown function DUF302 SEEA1960_RS20635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SEEA1960_RS20660 PF09857 Putative toxin of bacterial toxin-antitoxin pair SEEA1960_RS20665 PF13847 Methyltransferase domain SEEA1960_RS20675 PF01709 Transcriptional regulator SEEA1960_RS20690 PF01381 Helix-turn-helix SEEA1960_RS20690 PF00145 C-5 cytosine-specific DNA methylase SEEA1960_RS20695 PF07728 AAA domain (dynein-related subfamily) SEEA1960_RS20720 PF01527 Transposase SEEA1960_RS20730 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS20730 PF00107 Zinc-binding dehydrogenase SEEA1960_RS20735 PF01202 Shikimate kinase SEEA1960_RS20740 PF00107 Zinc-binding dehydrogenase SEEA1960_RS20740 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS20745 PF00106 short chain dehydrogenase SEEA1960_RS20750 PF02447 GntP family permease SEEA1960_RS20755 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS20760 PF03739 Lipopolysaccharide export system permease LptF/LptG SEEA1960_RS20765 PF03739 Lipopolysaccharide export system permease LptF/LptG SEEA1960_RS20775 PF00883 Cytosol aminopeptidase family, catalytic domain SEEA1960_RS20775 PF02789 Cytosol aminopeptidase family, N-terminal domain SEEA1960_RS20780 PF04364 DNA polymerase III chi subunit, HolC SEEA1960_RS20785 PF00133 tRNA synthetases class I (I, L, M and V) SEEA1960_RS20785 PF10458 Valyl tRNA synthetase tRNA binding arm SEEA1960_RS20785 PF08264 Anticodon-binding domain of tRNA SEEA1960_RS20790 PF05987 Bacterial protein of unknown function (DUF898) SEEA1960_RS20795 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS20800 PF12276 Protein of unknown function (DUF3617) SEEA1960_RS20805 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) SEEA1960_RS20810 PF06877 Regulator of ribonuclease activity B SEEA1960_RS20815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEA1960_RS20815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEA1960_RS20820 PF04074 YhcH/YjgK/YiaL SEEA1960_RS20835 PF00696 Amino acid kinase family SEEA1960_RS20840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEA1960_RS20840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEA1960_RS20845 PF03606 C4-dicarboxylate anaerobic carrier SEEA1960_RS20850 PF01316 Arginine repressor, DNA binding domain SEEA1960_RS20850 PF02863 Arginine repressor, C-terminal domain SEEA1960_RS20855 PF08052 PyrBI operon leader peptide SEEA1960_RS20860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEA1960_RS20860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEA1960_RS20865 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SEEA1960_RS20865 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SEEA1960_RS20870 PF01042 Endoribonuclease L-PSP SEEA1960_RS20880 PF00689 Cation transporting ATPase, C-terminus SEEA1960_RS20880 PF00690 Cation transporter/ATPase, N-terminus SEEA1960_RS20885 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS20890 PF02378 Phosphotransferase system, EIIC SEEA1960_RS20890 PF00367 phosphotransferase system, EIIB SEEA1960_RS20895 PF11941 Domain of unknown function (DUF3459) SEEA1960_RS20895 PF00128 Alpha amylase, catalytic domain SEEA1960_RS20900 PF03477 ATP cone domain SEEA1960_RS20900 PF13597 Anaerobic ribonucleoside-triphosphate reductase SEEA1960_RS20910 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SEEA1960_RS20915 PF01850 PIN domain SEEA1960_RS20920 PF00874 PRD domain SEEA1960_RS20920 PF05043 Mga helix-turn-helix domain SEEA1960_RS20920 PF08279 HTH domain SEEA1960_RS20920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS20925 PF07071 KDGP aldolase SEEA1960_RS20930 PF03841 L-seryl-tRNA selenium transferase SEEA1960_RS20935 PF01979 Amidohydrolase family SEEA1960_RS20965 PF07361 Cytochrome b562 SEEA1960_RS20970 PF01523 Putative modulator of DNA gyrase SEEA1960_RS20975 PF04751 Protein of unknown function (DUF615) SEEA1960_RS20980 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS20990 PF07690 Major Facilitator Superfamily SEEA1960_RS20995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEA1960_RS20995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS21000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS21000 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS21000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS21005 PF00294 pfkB family carbohydrate kinase SEEA1960_RS21010 PF07690 Major Facilitator Superfamily SEEA1960_RS21015 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS21020 PF17189 Glycosyl hydrolase family 30 beta sandwich domain SEEA1960_RS21025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEA1960_RS21025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEA1960_RS21030 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS21045 PF00171 Aldehyde dehydrogenase family SEEA1960_RS21050 PF04962 KduI/IolB family SEEA1960_RS21055 PF00083 Sugar (and other) transporter SEEA1960_RS21065 PF00083 Sugar (and other) transporter SEEA1960_RS21070 PF01380 SIS domain SEEA1960_RS21070 PF01418 Helix-turn-helix domain, rpiR family SEEA1960_RS21070 PF02685 Glucokinase SEEA1960_RS21080 PF01225 Mur ligase family, catalytic domain SEEA1960_RS21080 PF08245 Mur ligase middle domain SEEA1960_RS21080 PF02875 Mur ligase family, glutamate ligase domain SEEA1960_RS21085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SEEA1960_RS21090 PF00719 Inorganic pyrophosphatase SEEA1960_RS21095 PF01979 Amidohydrolase family SEEA1960_RS21100 PF07690 Major Facilitator Superfamily SEEA1960_RS21105 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SEEA1960_RS21110 PF04357 TamB, inner membrane protein subunit of TAM complex SEEA1960_RS21115 PF01103 Surface antigen SEEA1960_RS21115 PF07244 Surface antigen variable number repeat SEEA1960_RS21115 PF17243 POTRA domain TamA domain 1 SEEA1960_RS21120 PF01625 Peptide methionine sulfoxide reductase SEEA1960_RS21125 PF00571 CBS domain SEEA1960_RS21125 PF03471 Transporter associated domain SEEA1960_RS21125 PF01595 Cyclin M transmembrane N-terminal domain SEEA1960_RS21130 PF06526 Protein of unknown function (DUF1107) SEEA1960_RS21140 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) SEEA1960_RS21145 PF00459 Inositol monophosphatase family SEEA1960_RS21155 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS21155 PF02872 5'-nucleotidase, C-terminal domain SEEA1960_RS21160 PF01638 HxlR-like helix-turn-helix SEEA1960_RS21165 PF05368 NmrA-like family SEEA1960_RS21170 PF00892 EamA-like transporter family SEEA1960_RS21175 PF01814 Hemerythrin HHE cation binding domain SEEA1960_RS21175 PF04405 Domain of Unknown function (DUF542) SEEA1960_RS21190 PF00324 Amino acid permease SEEA1960_RS21195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SEEA1960_RS21195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEA1960_RS21200 PF04225 Opacity-associated protein A LysM-like domain SEEA1960_RS21200 PF08525 Opacity-associated protein A N-terminal motif SEEA1960_RS21210 PF01281 Ribosomal protein L9, N-terminal domain SEEA1960_RS21210 PF03948 Ribosomal protein L9, C-terminal domain SEEA1960_RS21215 PF01084 Ribosomal protein S18 SEEA1960_RS21220 PF00436 Single-strand binding protein family SEEA1960_RS21225 PF01250 Ribosomal protein S6 SEEA1960_RS21240 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS21245 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS21250 PF01261 Xylose isomerase-like TIM barrel SEEA1960_RS21255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEA1960_RS21260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEA1960_RS21265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS21270 PF03611 PTS system sugar-specific permease component SEEA1960_RS21280 PF00455 DeoR C terminal sensor domain SEEA1960_RS21280 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS21285 PF00326 Prolyl oligopeptidase family SEEA1960_RS21290 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS21295 PF07338 Protein of unknown function (DUF1471) SEEA1960_RS21300 PF02770 Acyl-CoA dehydrogenase, middle domain SEEA1960_RS21300 PF18158 Adaptive response protein AidB N-terminal domain SEEA1960_RS21300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS21305 PF03738 Glutathionylspermidine synthase preATP-grasp SEEA1960_RS21310 PF06693 Protein of unknown function (DUF1190) SEEA1960_RS21315 PF03994 Domain of Unknown Function (DUF350) SEEA1960_RS21320 PF10679 Protein of unknown function (DUF2491) SEEA1960_RS21330 PF04012 PspA/IM30 family SEEA1960_RS21335 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) SEEA1960_RS21340 PF08032 RNA 2'-O ribose methyltransferase substrate binding SEEA1960_RS21340 PF00588 SpoU rRNA Methylase family SEEA1960_RS21345 PF17876 Cold shock domain SEEA1960_RS21345 PF00575 S1 RNA binding domain SEEA1960_RS21345 PF00773 RNB domain SEEA1960_RS21345 PF08206 Ribonuclease B OB domain SEEA1960_RS21345 PF08461 Ribonuclease R winged-helix domain SEEA1960_RS21350 PF02082 Transcriptional regulator SEEA1960_RS21355 PF00709 Adenylosuccinate synthetase SEEA1960_RS21360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SEEA1960_RS21365 PF01145 SPFH domain / Band 7 family SEEA1960_RS21370 PF01145 SPFH domain / Band 7 family SEEA1960_RS21370 PF12221 Bacterial membrane protein N terminal SEEA1960_RS21375 PF01926 50S ribosome-binding GTPase SEEA1960_RS21375 PF13167 GTP-binding GTPase N-terminal SEEA1960_RS21375 PF16360 GTP-binding GTPase Middle Region SEEA1960_RS21380 PF17209 Hfq protein SEEA1960_RS21390 PF08676 MutL C terminal dimerisation domain SEEA1960_RS21390 PF01119 DNA mismatch repair protein, C-terminal domain SEEA1960_RS21395 PF01520 N-acetylmuramoyl-L-alanine amidase SEEA1960_RS21400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SEEA1960_RS21405 PF03853 YjeF-related protein N-terminus SEEA1960_RS21405 PF01256 Carbohydrate kinase SEEA1960_RS21410 PF08331 Domain of unknown function (DUF1730) SEEA1960_RS21430 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEA1960_RS21435 PF00929 Exonuclease SEEA1960_RS21440 PF03193 RsgA GTPase SEEA1960_RS21445 PF02666 Phosphatidylserine decarboxylase SEEA1960_RS21450 PF12795 Mechanosensitive ion channel porin domain SEEA1960_RS21450 PF12794 Mechanosensitive ion channel inner membrane domain 1 SEEA1960_RS21450 PF00924 Mechanosensitive ion channel SEEA1960_RS21460 PF13520 Amino acid permease SEEA1960_RS21465 PF00152 tRNA synthetases class II (D, K and N) SEEA1960_RS21470 PF02910 Fumarate reductase flavoprotein C-term SEEA1960_RS21470 PF00890 FAD binding domain SEEA1960_RS21475 PF13085 2Fe-2S iron-sulfur cluster binding domain SEEA1960_RS21475 PF13183 4Fe-4S dicluster domain SEEA1960_RS21480 PF02300 Fumarate reductase subunit C SEEA1960_RS21485 PF02313 Fumarate reductase subunit D SEEA1960_RS21490 PF08212 Lipocalin-like domain SEEA1960_RS21495 PF00893 Small Multidrug Resistance protein SEEA1960_RS21500 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS21505 PF08085 Entericidin EcnA/B family SEEA1960_RS21510 PF08085 Entericidin EcnA/B family SEEA1960_RS21515 PF09285 Elongation factor P, C-terminal SEEA1960_RS21515 PF08207 Elongation factor P (EF-P) KOW-like domain SEEA1960_RS21515 PF01132 Elongation factor P (EF-P) OB domain SEEA1960_RS21520 PF04055 Radical SAM superfamily SEEA1960_RS21525 PF15922 YjeJ-like SEEA1960_RS21530 PF13698 Domain of unknown function (DUF4156) SEEA1960_RS21540 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SEEA1960_RS21545 PF00118 TCP-1/cpn60 chaperonin family SEEA1960_RS21550 PF00166 Chaperonin 10 Kd subunit SEEA1960_RS21555 PF13520 Amino acid permease SEEA1960_RS21560 PF04186 FxsA cytoplasmic membrane protein SEEA1960_RS21565 PF00206 Lyase SEEA1960_RS21565 PF10415 Fumarase C C-terminus SEEA1960_RS21575 PF03091 CutA1 divalent ion tolerance protein SEEA1960_RS21580 PF02683 Cytochrome C biogenesis protein transmembrane region SEEA1960_RS21580 PF11412 Disulphide bond corrector protein DsbC SEEA1960_RS21595 PF13693 Winged helix-turn-helix DNA-binding SEEA1960_RS21605 PF03610 PTS system fructose IIA component SEEA1960_RS21605 PF00158 Sigma-54 interaction domain SEEA1960_RS21605 PF00874 PRD domain SEEA1960_RS21610 PF00834 Ribulose-phosphate 3 epimerase family SEEA1960_RS21615 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS21615 PF00107 Zinc-binding dehydrogenase SEEA1960_RS21620 PF01380 SIS domain SEEA1960_RS21625 PF00107 Zinc-binding dehydrogenase SEEA1960_RS21625 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS21630 PF03613 PTS system mannose/fructose/sorbose family IID component SEEA1960_RS21640 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS21645 PF03610 PTS system fructose IIA component SEEA1960_RS21645 PF03830 PTS system sorbose subfamily IIB component SEEA1960_RS21650 PF13276 HTH-like domain SEEA1960_RS21650 PF13683 Integrase core domain SEEA1960_RS21655 PF01569 PAP2 superfamily SEEA1960_RS21690 PF12833 Helix-turn-helix domain SEEA1960_RS21695 PF00072 Response regulator receiver domain SEEA1960_RS21695 PF00196 Bacterial regulatory proteins, luxR family SEEA1960_RS21700 PF00005 ABC transporter SEEA1960_RS21710 PF06977 SdiA-regulated SEEA1960_RS21720 PF02613 Nitrate reductase delta subunit SEEA1960_RS21725 PF04976 DMSO reductase anchor subunit (DmsC) SEEA1960_RS21730 PF12800 4Fe-4S binding domain SEEA1960_RS21730 PF13247 4Fe-4S dicluster domain SEEA1960_RS21735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS21735 PF00384 Molybdopterin oxidoreductase SEEA1960_RS21735 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS21740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS21740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SEEA1960_RS21740 PF17203 Single cache domain 3 SEEA1960_RS21740 PF00989 PAS fold SEEA1960_RS21745 PF00072 Response regulator receiver domain SEEA1960_RS21755 PF03605 Anaerobic c4-dicarboxylate membrane transporter SEEA1960_RS21760 PF05683 Fumarase C-terminus SEEA1960_RS21760 PF05681 Fumarate hydratase (Fumerase) SEEA1960_RS21770 PF02056 Family 4 glycosyl hydrolase SEEA1960_RS21770 PF11975 Family 4 glycosyl hydrolase C-terminal domain SEEA1960_RS21775 PF12833 Helix-turn-helix domain SEEA1960_RS21780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEA1960_RS21780 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEA1960_RS21780 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEA1960_RS21785 PF12833 Helix-turn-helix domain SEEA1960_RS21790 PF13520 Amino acid permease SEEA1960_RS21795 PF08019 Phosphoethanolamine transferase EptA/EptB SEEA1960_RS21795 PF00884 Sulfatase SEEA1960_RS21800 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS21800 PF00072 Response regulator receiver domain SEEA1960_RS21805 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS21805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS21810 PF00083 Sugar (and other) transporter SEEA1960_RS21810 PF08946 Osmosensory transporter coiled coil SEEA1960_RS21815 PF03831 PhnA domain SEEA1960_RS21815 PF08274 PhnA Zinc-Ribbon SEEA1960_RS21820 PF06983 3-demethylubiquinone-9 3-methyltransferase SEEA1960_RS21825 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS21835 PF00384 Molybdopterin oxidoreductase SEEA1960_RS21835 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS21835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS21840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS21840 PF00384 Molybdopterin oxidoreductase SEEA1960_RS21840 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS21845 PF08238 Sel1 repeat SEEA1960_RS21850 PF00375 Sodium:dicarboxylate symporter family SEEA1960_RS21860 PF01578 Cytochrome C assembly protein SEEA1960_RS21860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEA1960_RS21865 PF03916 Polysulphide reductase, NrfD SEEA1960_RS21870 PF00037 4Fe-4S binding domain SEEA1960_RS21870 PF13247 4Fe-4S dicluster domain SEEA1960_RS21875 PF13435 Cytochrome c554 and c-prime SEEA1960_RS21875 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SEEA1960_RS21880 PF02335 Cytochrome c552 SEEA1960_RS21890 PF00501 AMP-binding enzyme SEEA1960_RS21890 PF13193 AMP-binding enzyme C-terminal domain SEEA1960_RS21890 PF16177 Acetyl-coenzyme A synthetase N-terminus SEEA1960_RS21895 PF04341 Protein of unknown function, DUF485 SEEA1960_RS21900 PF00474 Sodium:solute symporter family SEEA1960_RS21905 PF04172 LrgB-like family SEEA1960_RS21910 PF03788 LrgA family SEEA1960_RS21915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS21915 PF03466 LysR substrate binding domain SEEA1960_RS21920 PF00999 Sodium/hydrogen exchanger family SEEA1960_RS21930 PF00860 Permease family SEEA1960_RS21950 PF00376 MerR family regulatory protein SEEA1960_RS21950 PF09278 MerR, DNA binding SEEA1960_RS21955 PF12833 Helix-turn-helix domain SEEA1960_RS21960 PF00563 EAL domain SEEA1960_RS21960 PF12792 CSS motif domain associated with EAL SEEA1960_RS21965 PF15940 Family of unknown function SEEA1960_RS21970 PF00005 ABC transporter SEEA1960_RS21970 PF00664 ABC transporter transmembrane region SEEA1960_RS22005 PF00436 Single-strand binding protein family SEEA1960_RS22010 PF17760 UvrA interaction domain SEEA1960_RS22010 PF00005 ABC transporter SEEA1960_RS22010 PF17755 UvrA DNA-binding domain SEEA1960_RS22025 PF04237 YjbR SEEA1960_RS22030 PF01894 Uncharacterised protein family UPF0047 SEEA1960_RS22035 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SEEA1960_RS22040 PF00155 Aminotransferase class I and II SEEA1960_RS22045 PF00842 Alanine racemase, C-terminal domain SEEA1960_RS22045 PF01168 Alanine racemase, N-terminal domain SEEA1960_RS22050 PF00772 DnaB-like helicase N terminal domain SEEA1960_RS22050 PF03796 DnaB-like helicase C terminal domain SEEA1960_RS22055 PF08240 Alcohol dehydrogenase GroES-like domain SEEA1960_RS22055 PF00107 Zinc-binding dehydrogenase SEEA1960_RS22060 PF09583 Phage shock protein G (Phageshock_PspG) SEEA1960_RS22065 PF01207 Dihydrouridine synthase (Dus) SEEA1960_RS22075 PF01475 Ferric uptake regulator family SEEA1960_RS22080 PF05532 CsbD-like SEEA1960_RS22085 PF01554 MatE SEEA1960_RS22090 PF00717 Peptidase S24-like SEEA1960_RS22090 PF01726 LexA DNA binding domain SEEA1960_RS22095 PF01219 Prokaryotic diacylglycerol kinase SEEA1960_RS22100 PF01553 Acyltransferase SEEA1960_RS22105 PF01040 UbiA prenyltransferase family SEEA1960_RS22110 PF04345 Chorismate lyase SEEA1960_RS22115 PF07148 Maltose operon periplasmic protein precursor (MalM) SEEA1960_RS22120 PF02264 LamB porin SEEA1960_RS22125 PF00005 ABC transporter SEEA1960_RS22125 PF17912 MalK OB fold domain SEEA1960_RS22130 PF01547 Bacterial extracellular solute-binding protein SEEA1960_RS22135 PF14785 Maltose transport system permease protein MalF P2 domain SEEA1960_RS22135 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS22140 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS22145 PF06146 Phosphate-starvation-inducible E SEEA1960_RS22150 PF06082 Exopolysaccharide biosynthesis protein YbjH SEEA1960_RS22155 PF06251 Capsule biosynthesis GfcC SEEA1960_RS22160 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SEEA1960_RS22170 PF00342 Phosphoglucose isomerase SEEA1960_RS22175 PF01842 ACT domain SEEA1960_RS22175 PF00696 Amino acid kinase family SEEA1960_RS22180 PF08765 Mor transcription activator family SEEA1960_RS22260 PF04138 GtrA-like protein SEEA1960_RS22265 PF00535 Glycosyl transferase family 2 SEEA1960_RS22290 PF03335 Phage tail fibre repeat SEEA1960_RS22290 PF07484 Phage Tail Collar Domain SEEA1960_RS22290 PF08400 Prophage tail fibre N-terminal SEEA1960_RS22315 PF01758 Sodium Bile acid symporter family SEEA1960_RS22320 PF11656 YjbD family (DUF3811) SEEA1960_RS22325 PF01479 S4 domain SEEA1960_RS22325 PF00849 RNA pseudouridylate synthase SEEA1960_RS22330 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SEEA1960_RS22335 PF03575 Peptidase family S51 SEEA1960_RS22340 PF02690 Na+/Pi-cotransporter SEEA1960_RS22345 PF02607 B12 binding domain SEEA1960_RS22345 PF02574 Homocysteine S-methyltransferase SEEA1960_RS22345 PF00809 Pterin binding enzyme SEEA1960_RS22345 PF02965 Vitamin B12 dependent methionine synthase, activation domain SEEA1960_RS22345 PF02310 B12 binding domain SEEA1960_RS22350 PF09339 IclR helix-turn-helix domain SEEA1960_RS22350 PF01614 Bacterial transcriptional regulator SEEA1960_RS22360 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SEEA1960_RS22365 PF00463 Isocitrate lyase family SEEA1960_RS22370 PF01274 Malate synthase SEEA1960_RS22375 PF04204 Homoserine O-succinyltransferase SEEA1960_RS22380 PF13673 Acetyltransferase (GNAT) domain SEEA1960_RS22405 PF01808 AICARFT/IMPCHase bienzyme SEEA1960_RS22405 PF02142 MGS-like domain SEEA1960_RS22410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SEEA1960_RS22410 PF02844 Phosphoribosylglycinamide synthetase, N domain SEEA1960_RS22410 PF02843 Phosphoribosylglycinamide synthetase, C domain SEEA1960_RS22415 PF00072 Response regulator receiver domain SEEA1960_RS22415 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS22415 PF00158 Sigma-54 interaction domain SEEA1960_RS22420 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS22420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS22425 PF13801 Heavy-metal resistance SEEA1960_RS22430 PF07356 Protein of unknown function (DUF1481) SEEA1960_RS22435 PF00216 Bacterial DNA-binding protein SEEA1960_RS22440 PF04222 Protein of unknown function (DUF416) SEEA1960_RS22445 PF04493 Endonuclease V SEEA1960_RS22450 PF01208 Uroporphyrinogen decarboxylase (URO-D) SEEA1960_RS22455 PF09297 NADH pyrophosphatase zinc ribbon domain SEEA1960_RS22455 PF00293 NUDIX domain SEEA1960_RS22460 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SEEA1960_RS22465 PF13667 ThiC-associated domain SEEA1960_RS22465 PF01964 Radical SAM ThiC family SEEA1960_RS22470 PF02581 Thiamine monophosphate synthase SEEA1960_RS22475 PF00899 ThiF family SEEA1960_RS22480 PF02597 ThiS family SEEA1960_RS22485 PF05690 Thiazole biosynthesis protein ThiG SEEA1960_RS22490 PF06968 Biotin and Thiamin Synthesis associated domain SEEA1960_RS22490 PF04055 Radical SAM superfamily SEEA1960_RS22515 PF04998 RNA polymerase Rpb1, domain 5 SEEA1960_RS22515 PF00623 RNA polymerase Rpb1, domain 2 SEEA1960_RS22515 PF04997 RNA polymerase Rpb1, domain 1 SEEA1960_RS22515 PF05000 RNA polymerase Rpb1, domain 4 SEEA1960_RS22515 PF04983 RNA polymerase Rpb1, domain 3 SEEA1960_RS22520 PF10385 RNA polymerase beta subunit external 1 domain SEEA1960_RS22520 PF04560 RNA polymerase Rpb2, domain 7 SEEA1960_RS22520 PF04563 RNA polymerase beta subunit SEEA1960_RS22520 PF00562 RNA polymerase Rpb2, domain 6 SEEA1960_RS22520 PF04561 RNA polymerase Rpb2, domain 2 SEEA1960_RS22520 PF04565 RNA polymerase Rpb2, domain 3 SEEA1960_RS22525 PF00542 Ribosomal protein L7/L12 C-terminal domain SEEA1960_RS22525 PF16320 Ribosomal protein L7/L12 dimerisation domain SEEA1960_RS22530 PF00466 Ribosomal protein L10 SEEA1960_RS22540 PF00687 Ribosomal protein L1p/L10e family SEEA1960_RS22545 PF03946 Ribosomal protein L11, N-terminal domain SEEA1960_RS22545 PF00298 Ribosomal protein L11, RNA binding domain SEEA1960_RS22550 PF02357 Transcription termination factor nusG SEEA1960_RS22550 PF00467 KOW motif SEEA1960_RS22555 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SEEA1960_RS22560 PF03143 Elongation factor Tu C-terminal domain SEEA1960_RS22560 PF03144 Elongation factor Tu domain 2 SEEA1960_RS22560 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS22585 PF00485 Phosphoribulokinase / Uridine kinase family SEEA1960_RS22590 PF08279 HTH domain SEEA1960_RS22590 PF03099 Biotin/lipoate A/B protein ligase family SEEA1960_RS22590 PF02237 Biotin protein ligase C terminal domain SEEA1960_RS22595 PF01565 FAD binding domain SEEA1960_RS22595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SEEA1960_RS22625 PF01177 Asp/Glu/Hydantoin racemase SEEA1960_RS22630 PF07715 TonB-dependent Receptor Plug Domain SEEA1960_RS22630 PF00593 TonB dependent receptor SEEA1960_RS22635 PF05958 tRNA (Uracil-5-)-methyltransferase SEEA1960_RS22640 PF07226 Protein of unknown function (DUF1422) SEEA1960_RS22645 PF00440 Bacterial regulatory proteins, tetR family SEEA1960_RS22650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEA1960_RS22650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEA1960_RS22655 PF03466 LysR substrate binding domain SEEA1960_RS22655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS22665 PF14698 Argininosuccinate lyase C-terminal SEEA1960_RS22665 PF00206 Lyase SEEA1960_RS22670 PF00696 Amino acid kinase family SEEA1960_RS22675 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEA1960_RS22675 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEA1960_RS22680 PF01546 Peptidase family M20/M25/M40 SEEA1960_RS22680 PF07687 Peptidase dimerisation domain SEEA1960_RS22685 PF00311 Phosphoenolpyruvate carboxylase SEEA1960_RS22690 PF00884 Sulfatase SEEA1960_RS22695 PF12833 Helix-turn-helix domain SEEA1960_RS22700 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEA1960_RS22705 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS22710 PF06940 Domain of unknown function (DUF1287) SEEA1960_RS22715 PF00141 Peroxidase SEEA1960_RS22720 PF02219 Methylenetetrahydrofolate reductase SEEA1960_RS22735 PF00842 Alanine racemase, C-terminal domain SEEA1960_RS22735 PF01168 Alanine racemase, N-terminal domain SEEA1960_RS22740 PF00464 Serine hydroxymethyltransferase SEEA1960_RS22745 PF00149 Calcineurin-like phosphoesterase SEEA1960_RS22745 PF02872 5'-nucleotidase, C-terminal domain SEEA1960_RS22745 PF17936 Bacterial Ig domain SEEA1960_RS22760 PF05552 Conserved TM helix SEEA1960_RS22760 PF00924 Mechanosensitive ion channel SEEA1960_RS22765 PF00696 Amino acid kinase family SEEA1960_RS22765 PF00742 Homoserine dehydrogenase SEEA1960_RS22765 PF03447 Homoserine dehydrogenase, NAD binding domain SEEA1960_RS22770 PF01053 Cys/Met metabolism PLP-dependent enzyme SEEA1960_RS22775 PF01340 Met Apo-repressor, MetJ SEEA1960_RS22780 PF17425 Arylsulfotransferase Ig-like domain SEEA1960_RS22780 PF05935 Arylsulfotransferase (ASST) SEEA1960_RS22790 PF01197 Ribosomal protein L31 SEEA1960_RS22795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SEEA1960_RS22795 PF17764 3′ DNA-binding domain (3′BD) SEEA1960_RS22795 PF18074 Primosomal protein N C-terminal domain SEEA1960_RS22795 PF00271 Helicase conserved C-terminal domain SEEA1960_RS22795 PF00270 DEAD/DEAH box helicase SEEA1960_RS22800 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS22805 PF05036 Sporulation related domain SEEA1960_RS22810 PF00227 Proteasome subunit SEEA1960_RS22815 PF00004 ATPase family associated with various cellular activities (AAA) SEEA1960_RS22815 PF07724 AAA domain (Cdc48 subfamily) SEEA1960_RS22815 PF10431 C-terminal, D2-small domain, of ClpB protein SEEA1960_RS22820 PF01040 UbiA prenyltransferase family SEEA1960_RS22825 PF03737 Aldolase/RraA SEEA1960_RS22830 PF06005 Cell division protein ZapB SEEA1960_RS22835 PF00230 Major intrinsic protein SEEA1960_RS22840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS22840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS22845 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SEEA1960_RS22850 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS22850 PF00970 Oxidoreductase FAD-binding domain SEEA1960_RS22855 PF05656 Protein of unknown function (DUF805) SEEA1960_RS22860 PF07305 Protein of unknown function (DUF1454) SEEA1960_RS22865 PF00121 Triosephosphate isomerase SEEA1960_RS22870 PF00834 Ribulose-phosphate 3 epimerase family SEEA1960_RS22875 PF03992 Antibiotic biosynthesis monooxygenase SEEA1960_RS22880 PF01791 DeoC/LacD family aldolase SEEA1960_RS22885 PF13407 Periplasmic binding protein domain SEEA1960_RS22890 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS22895 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS22900 PF00005 ABC transporter SEEA1960_RS22905 PF04198 Putative sugar-binding domain SEEA1960_RS22910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS22910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS22920 PF02611 CDP-diacylglycerol pyrophosphatase SEEA1960_RS22925 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS22925 PF00155 Aminotransferase class I and II SEEA1960_RS22935 PF00294 pfkB family carbohydrate kinase SEEA1960_RS22945 PF02611 CDP-diacylglycerol pyrophosphatase SEEA1960_RS22955 PF00365 Phosphofructokinase SEEA1960_RS22960 PF01545 Cation efflux family SEEA1960_RS22960 PF16916 Dimerisation domain of Zinc Transporter SEEA1960_RS22965 PF07813 LTXXQ motif family protein SEEA1960_RS22970 PF00486 Transcriptional regulatory protein, C terminal SEEA1960_RS22970 PF00072 Response regulator receiver domain SEEA1960_RS22975 PF16527 Two-component sensor protein CpxA, periplasmic domain SEEA1960_RS22975 PF00672 HAMP domain SEEA1960_RS22975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS22975 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS22985 PF03473 MOSC domain SEEA1960_RS22985 PF03475 3-alpha domain SEEA1960_RS22990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SEEA1960_RS22990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SEEA1960_RS22995 PF03480 Bacterial extracellular solute-binding protein, family 7 SEEA1960_RS23000 PF06379 L-rhamnose-proton symport protein (RhaT) SEEA1960_RS23005 PF02311 AraC-like ligand binding domain SEEA1960_RS23005 PF12833 Helix-turn-helix domain SEEA1960_RS23010 PF12833 Helix-turn-helix domain SEEA1960_RS23010 PF02311 AraC-like ligand binding domain SEEA1960_RS23015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEA1960_RS23015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEA1960_RS23020 PF06134 L-rhamnose isomerase (RhaA) SEEA1960_RS23025 PF00596 Class II Aldolase and Adducin N-terminal domain SEEA1960_RS23030 PF00465 Iron-containing alcohol dehydrogenase SEEA1960_RS23035 PF05336 L-rhamnose mutarotase SEEA1960_RS23045 PF03591 AzlC protein SEEA1960_RS23055 PF12889 Protein of unknown function (DUF3829) SEEA1960_RS23065 PF00183 Hsp90 protein SEEA1960_RS23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS23075 PF12889 Protein of unknown function (DUF3829) SEEA1960_RS23080 PF12889 Protein of unknown function (DUF3829) SEEA1960_RS23085 PF02634 FdhD/NarQ family SEEA1960_RS23090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS23090 PF00384 Molybdopterin oxidoreductase SEEA1960_RS23090 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS23095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEA1960_RS23095 PF00384 Molybdopterin oxidoreductase SEEA1960_RS23095 PF01568 Molydopterin dinucleotide binding domain SEEA1960_RS23100 PF13247 4Fe-4S dicluster domain SEEA1960_RS23100 PF09163 Formate dehydrogenase N, transmembrane SEEA1960_RS23105 PF01292 Prokaryotic cytochrome b561 SEEA1960_RS23110 PF04216 Protein involved in formate dehydrogenase formation SEEA1960_RS23120 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system SEEA1960_RS23125 PF07859 alpha/beta hydrolase fold SEEA1960_RS23130 PF00583 Acetyltransferase (GNAT) family SEEA1960_RS23130 PF09500 Putative thioesterase (yiiD_Cterm) SEEA1960_RS23135 PF02580 D-Tyr-tRNA(Tyr) deacylase SEEA1960_RS23140 PF03631 Virulence factor BrkB SEEA1960_RS23145 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS23150 PF08220 DeoR-like helix-turn-helix domain SEEA1960_RS23150 PF00455 DeoR C terminal sensor domain SEEA1960_RS23155 PF00294 pfkB family carbohydrate kinase SEEA1960_RS23160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEA1960_RS23160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEA1960_RS23165 PF01791 DeoC/LacD family aldolase SEEA1960_RS23175 PF01263 Aldose 1-epimerase SEEA1960_RS23180 PF01055 Glycosyl hydrolases family 31 SEEA1960_RS23195 PF06178 Oligogalacturonate-specific porin protein (KdgM) SEEA1960_RS23215 PF04055 Radical SAM superfamily SEEA1960_RS23230 PF03144 Elongation factor Tu domain 2 SEEA1960_RS23230 PF00009 Elongation factor Tu GTP binding domain SEEA1960_RS23230 PF00679 Elongation factor G C-terminus SEEA1960_RS23240 PF03951 Glutamine synthetase, beta-Grasp domain SEEA1960_RS23240 PF00120 Glutamine synthetase, catalytic domain SEEA1960_RS23250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEA1960_RS23250 PF00512 His Kinase A (phospho-acceptor) domain SEEA1960_RS23250 PF00989 PAS fold SEEA1960_RS23255 PF02954 Bacterial regulatory protein, Fis family SEEA1960_RS23255 PF00158 Sigma-54 interaction domain SEEA1960_RS23255 PF00072 Response regulator receiver domain SEEA1960_RS23260 PF04055 Radical SAM superfamily SEEA1960_RS23260 PF06969 HemN C-terminal domain SEEA1960_RS23265 PF04220 Der GTPase activator (YihI) SEEA1960_RS23275 PF01926 50S ribosome-binding GTPase SEEA1960_RS23280 PF00476 DNA polymerase family A SEEA1960_RS23280 PF01612 3'-5' exonuclease SEEA1960_RS23280 PF01367 5'-3' exonuclease, C-terminal SAM fold SEEA1960_RS23280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SEEA1960_RS23290 PF01553 Acyltransferase SEEA1960_RS23295 PF01323 DSBA-like thioredoxin domain SEEA1960_RS23300 PF01636 Phosphotransferase enzyme family SEEA1960_RS23305 PF06288 Protein of unknown function (DUF1040) SEEA1960_RS23310 PF12804 MobA-like NTP transferase domain SEEA1960_RS23315 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SEEA1960_RS23345 PF12724 Flavodoxin domain SEEA1960_RS23350 PF02386 Cation transport protein SEEA1960_RS23355 PF09186 Domain of unknown function (DUF1949) SEEA1960_RS23355 PF01205 Uncharacterized protein family UPF0029 SEEA1960_RS23360 PF00557 Metallopeptidase family M24 SEEA1960_RS23365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SEEA1960_RS23365 PF00378 Enoyl-CoA hydratase/isomerase SEEA1960_RS23365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SEEA1960_RS23370 PF00108 Thiolase, N-terminal domain SEEA1960_RS23370 PF02803 Thiolase, C-terminal domain SEEA1960_RS23375 PF05935 Arylsulfotransferase (ASST) SEEA1960_RS23375 PF17425 Arylsulfotransferase Ig-like domain SEEA1960_RS23380 PF00175 Oxidoreductase NAD-binding domain SEEA1960_RS23380 PF00970 Oxidoreductase FAD-binding domain SEEA1960_RS23385 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SEEA1960_RS23390 PF02357 Transcription termination factor nusG SEEA1960_RS23395 PF01026 TatD related DNase SEEA1960_RS23400 PF00902 Sec-independent protein translocase protein (TatC) SEEA1960_RS23410 PF02416 mttA/Hcf106 family SEEA1960_RS23415 PF03109 ABC1 family SEEA1960_RS23420 PF02036 SCP-2 sterol transfer family SEEA1960_RS23425 PF01209 ubiE/COQ5 methyltransferase family SEEA1960_RS23430 PF02646 RmuC family SEEA1960_RS23435 PF01048 Phosphorylase superfamily SEEA1960_RS23440 PF01738 Dienelactone hydrolase family SEEA1960_RS23445 PF04055 Radical SAM superfamily SEEA1960_RS23445 PF13186 Iron-sulfur cluster-binding domain SEEA1960_RS23450 PF08267 Cobalamin-independent synthase, N-terminal domain SEEA1960_RS23450 PF01717 Cobalamin-independent synthase, Catalytic domain SEEA1960_RS23455 PF03466 LysR substrate binding domain SEEA1960_RS23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS23460 PF00892 EamA-like transporter family SEEA1960_RS23470 PF12146 Serine aminopeptidase, S33 SEEA1960_RS23475 PF01810 LysE type translocator SEEA1960_RS23480 PF01810 LysE type translocator SEEA1960_RS23485 PF00570 HRDC domain SEEA1960_RS23485 PF16124 RecQ zinc-binding SEEA1960_RS23485 PF00270 DEAD/DEAH box helicase SEEA1960_RS23485 PF09382 RQC domain SEEA1960_RS23485 PF00271 Helicase conserved C-terminal domain SEEA1960_RS23490 PF02253 Phospholipase A1 SEEA1960_RS23495 PF03061 Thioesterase superfamily SEEA1960_RS23500 PF00892 EamA-like transporter family SEEA1960_RS23515 PF01544 CorA-like Mg2+ transporter protein SEEA1960_RS23525 PF00580 UvrD/REP helicase N-terminal domain SEEA1960_RS23525 PF13361 UvrD-like helicase C-terminal domain SEEA1960_RS23530 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS23535 PF02899 Phage integrase, N-terminal SAM-like domain SEEA1960_RS23535 PF00589 Phage integrase family SEEA1960_RS23540 PF04340 Protein of unknown function, DUF484 SEEA1960_RS23545 PF01678 Diaminopimelate epimerase SEEA1960_RS23550 PF13627 Prokaryotic lipoprotein-attachment site SEEA1960_RS23570 PF01491 Frataxin-like domain SEEA1960_RS23575 PF12633 Adenylate cyclase NT domain SEEA1960_RS23575 PF01295 Adenylate cyclase, class-I SEEA1960_RS23585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SEEA1960_RS23585 PF03900 Porphobilinogen deaminase, C-terminal domain SEEA1960_RS23590 PF02602 Uroporphyrinogen-III synthase HemD SEEA1960_RS23595 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SEEA1960_RS23600 PF07719 Tetratricopeptide repeat SEEA1960_RS23600 PF07219 HemY protein N-terminus SEEA1960_RS23625 PF00324 Amino acid permease SEEA1960_RS23630 PF03808 Glycosyl transferase WecB/TagA/CpsF family SEEA1960_RS23635 PF06899 WzyE protein, O-antigen assembly polymerase SEEA1960_RS23640 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 SEEA1960_RS23645 PF01943 Polysaccharide biosynthesis protein SEEA1960_RS23650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SEEA1960_RS23660 PF00483 Nucleotidyl transferase SEEA1960_RS23660 PF00483 Nucleotidyl transferase SEEA1960_RS23665 PF16363 GDP-mannose 4,6 dehydratase SEEA1960_RS23670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SEEA1960_RS23670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SEEA1960_RS23670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SEEA1960_RS23675 PF02350 UDP-N-acetylglucosamine 2-epimerase SEEA1960_RS23680 PF02706 Chain length determinant protein SEEA1960_RS23685 PF00953 Glycosyl transferase family 4 SEEA1960_RS23690 PF07497 Rho termination factor, RNA-binding domain SEEA1960_RS23690 PF07498 Rho termination factor, N-terminal domain SEEA1960_RS23690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS23695 PF00085 Thioredoxin SEEA1960_RS23700 PF00270 DEAD/DEAH box helicase SEEA1960_RS23700 PF00271 Helicase conserved C-terminal domain SEEA1960_RS23705 PF02541 Ppx/GppA phosphatase family SEEA1960_RS23710 PF00580 UvrD/REP helicase N-terminal domain SEEA1960_RS23710 PF13361 UvrD-like helicase C-terminal domain SEEA1960_RS23715 PF04973 Nicotinamide mononucleotide transporter SEEA1960_RS23720 PF01048 Phosphorylase superfamily SEEA1960_RS23735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SEEA1960_RS23735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SEEA1960_RS23740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS23740 PF03466 LysR substrate binding domain SEEA1960_RS23755 PF00291 Pyridoxal-phosphate dependent enzyme SEEA1960_RS23755 PF00585 C-terminal regulatory domain of Threonine dehydratase SEEA1960_RS23760 PF00920 Dehydratase family SEEA1960_RS23765 PF01063 Amino-transferase class IV SEEA1960_RS23775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEA1960_RS23775 PF00205 Thiamine pyrophosphate enzyme, central domain SEEA1960_RS23775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEA1960_RS23780 PF08046 IlvGEDA operon leader peptide SEEA1960_RS23785 PF01078 Magnesium chelatase, subunit ChlI SEEA1960_RS23785 PF13335 Magnesium chelatase, subunit ChlI C-terminal SEEA1960_RS23790 PF04219 Protein of unknown function, DUF SEEA1960_RS23795 PF03466 LysR substrate binding domain SEEA1960_RS23795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS23830 PF00392 Bacterial regulatory proteins, gntR family SEEA1960_RS23830 PF07729 FCD domain SEEA1960_RS23835 PF07690 Major Facilitator Superfamily SEEA1960_RS23840 PF00356 Bacterial regulatory proteins, lacI family SEEA1960_RS23845 PF00294 pfkB family carbohydrate kinase SEEA1960_RS23850 PF13407 Periplasmic binding protein domain SEEA1960_RS23855 PF02653 Branched-chain amino acid transport system / permease component SEEA1960_RS23860 PF00005 ABC transporter SEEA1960_RS23865 PF05025 RbsD / FucU transport protein family SEEA1960_RS23870 PF02705 K+ potassium transporter SEEA1960_RS23875 PF07728 AAA domain (dynein-related subfamily) SEEA1960_RS23875 PF12592 Protein of unknown function (DUF3763) SEEA1960_RS23875 PF17868 AAA lid domain SEEA1960_RS23880 PF05762 VWA domain containing CoxE-like protein SEEA1960_RS23885 PF03590 Aspartate-ammonia ligase SEEA1960_RS23890 PF01037 Lrp/AsnC ligand binding domain SEEA1960_RS23895 PF00258 Flavodoxin SEEA1960_RS23900 PF01134 Glucose inhibited division protein A SEEA1960_RS23900 PF13932 GidA associated domain SEEA1960_RS23905 PF02527 rRNA small subunit methyltransferase G SEEA1960_RS23910 PF03899 ATP synthase I chain SEEA1960_RS23915 PF00119 ATP synthase A chain SEEA1960_RS23920 PF00137 ATP synthase subunit C SEEA1960_RS23925 PF00430 ATP synthase B/B' CF(0) SEEA1960_RS23930 PF00213 ATP synthase delta (OSCP) subunit SEEA1960_RS23935 PF00306 ATP synthase alpha/beta chain, C terminal domain SEEA1960_RS23935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS23935 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEA1960_RS23940 PF00231 ATP synthase SEEA1960_RS23945 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEA1960_RS23945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEA1960_RS23950 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SEEA1960_RS23950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SEEA1960_RS23965 PF00132 Bacterial transferase hexapeptide (six repeats) SEEA1960_RS23965 PF12804 MobA-like NTP transferase domain SEEA1960_RS23970 PF01380 SIS domain SEEA1960_RS23975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEA1960_RS23975 PF12793 Sugar transport-related sRNA regulator N-term SEEA1960_RS23980 PF08501 Shikimate dehydrogenase substrate binding domain SEEA1960_RS23985 PF02378 Phosphotransferase system, EIIC SEEA1960_RS23985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEA1960_RS23990 PF12849 PBP superfamily domain SEEA1960_RS23995 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS24000 PF00528 Binding-protein-dependent transport system inner membrane component SEEA1960_RS24005 PF00005 ABC transporter SEEA1960_RS24010 PF01895 PhoU domain SEEA1960_RS24015 PF13419 Haloacid dehalogenase-like hydrolase SEEA1960_RS24030 PF03358 NADPH-dependent FMN reductase SEEA1960_RS24040 PF03466 LysR substrate binding domain SEEA1960_RS24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEA1960_RS24045 PF07690 Major Facilitator Superfamily SEEA1960_RS24050 PF10396 GTP-binding protein TrmE N-terminus SEEA1960_RS24050 PF12631 MnmE helical domain SEEA1960_RS24050 PF01926 50S ribosome-binding GTPase SEEA1960_RS24055 PF14849 YidC periplasmic domain SEEA1960_RS24055 PF02096 60Kd inner membrane protein SEEA1960_RS24060 PF01809 Putative membrane protein insertion efficiency factor SEEA1960_RS24065 PF00825 Ribonuclease P SEEA1960_RS24070 PF00468 Ribosomal protein L34