locus-tag class description GER12_RS00005 PF08298 PrkA AAA domain GER12_RS00005 PF06798 PrkA serine protein kinase C-terminal domain GER12_RS00010 PF04285 Protein of unknown function (DUF444) GER12_RS00020 PF17155 Gammaproteobacterial periplasmic sensor domain GER12_RS00020 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS00025 PF04073 Aminoacyl-tRNA editing domain GER12_RS00035 PF04284 Protein of unknown function (DUF441) GER12_RS00040 PF02311 AraC-like ligand binding domain GER12_RS00040 PF12833 Helix-turn-helix domain GER12_RS00045 PF07690 Major Facilitator Superfamily GER12_RS00050 PF04343 Protein of unknown function, DUF488 GER12_RS00060 PF03891 Domain of unknown function (DUF333) GER12_RS00070 PF04226 Transglycosylase associated protein GER12_RS00080 PF08956 Domain of unknown function (DUF1869) GER12_RS00085 PF09313 Domain of unknown function (DUF1971) GER12_RS00090 PF01810 LysE type translocator GER12_RS00095 PF01817 Chorismate mutase type II GER12_RS00110 PF00376 MerR family regulatory protein GER12_RS00110 PF09278 MerR, DNA binding GER12_RS00120 PF13427 Domain of unknown function (DUF4111) GER12_RS00120 PF01909 Nucleotidyltransferase domain GER12_RS00125 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GER12_RS00140 PF00924 Mechanosensitive ion channel GER12_RS00145 PF00005 ABC transporter GER12_RS00150 PF00005 ABC transporter GER12_RS00155 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS00155 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS00160 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS00165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS00175 PF01292 Prokaryotic cytochrome b561 GER12_RS00185 PF00011 Hsp20/alpha crystallin family GER12_RS00210 PF06316 Enterobacterial Ail/Lom protein GER12_RS00220 PF00313 'Cold-shock' DNA-binding domain GER12_RS00225 PF00652 Ricin-type beta-trefoil lectin domain GER12_RS00230 PF06183 DinI-like family GER12_RS00245 PF00180 Isocitrate/isopropylmalate dehydrogenase GER12_RS00250 PF00849 RNA pseudouridylate synthase GER12_RS00260 PF00293 NUDIX domain GER12_RS00270 PF04356 Protein of unknown function (DUF489) GER12_RS00275 PF00206 Lyase GER12_RS00275 PF08328 Adenylosuccinate lyase C-terminal GER12_RS00280 PF00486 Transcriptional regulatory protein, C terminal GER12_RS00280 PF00072 Response regulator receiver domain GER12_RS00285 PF08918 PhoQ Sensor GER12_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS00290 PF08007 Cupin superfamily protein GER12_RS00300 PF07687 Peptidase dimerisation domain GER12_RS00300 PF01546 Peptidase family M20/M25/M40 GER12_RS00305 PF08402 TOBE domain GER12_RS00305 PF00005 ABC transporter GER12_RS00310 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS00315 PF06767 Sif protein GER12_RS00320 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS00325 PF13416 Bacterial extracellular solute-binding protein GER12_RS00330 PF02146 Sir2 family GER12_RS00335 PF00480 ROK family GER12_RS00340 PF12704 MacB-like periplasmic core domain GER12_RS00340 PF02687 FtsX-like permease family GER12_RS00345 PF00005 ABC transporter GER12_RS00350 PF12704 MacB-like periplasmic core domain GER12_RS00350 PF02687 FtsX-like permease family GER12_RS00355 PF00270 DEAD/DEAH box helicase GER12_RS00355 PF02559 CarD-like/TRCF domain GER12_RS00355 PF03461 TRCF domain GER12_RS00355 PF00271 Helicase conserved C-terminal domain GER12_RS00355 PF17757 UvrB interaction domain GER12_RS00360 PF17969 L,D-transpeptidase C-terminal domain GER12_RS00360 PF01476 LysM domain GER12_RS00360 PF03734 L,D-transpeptidase catalytic domain GER12_RS00365 PF07338 Protein of unknown function (DUF1471) GER12_RS00370 PF00440 Bacterial regulatory proteins, tetR family GER12_RS00375 PF05433 Glycine zipper 2TM domain GER12_RS00380 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS00385 PF05728 Uncharacterised protein family (UPF0227) GER12_RS00390 PF00933 Glycosyl hydrolase family 3 N terminal domain GER12_RS00395 PF01636 Phosphotransferase enzyme family GER12_RS00400 PF13036 Peptidoglycan-synthase activator LpoB GER12_RS00405 PF07233 Protein of unknown function (DUF1425) GER12_RS00410 PF01230 HIT domain GER12_RS00415 PF07715 TonB-dependent Receptor Plug Domain GER12_RS00415 PF00593 TonB dependent receptor GER12_RS00420 PF02378 Phosphotransferase system, EIIC GER12_RS00420 PF00367 phosphotransferase system, EIIB GER12_RS00425 PF01026 TatD related DNase GER12_RS00430 PF09115 DNA polymerase III, delta subunit, C terminal GER12_RS00435 PF02223 Thymidylate kinase GER12_RS00440 PF02618 YceG-like family GER12_RS00445 PF01063 Amino-transferase class IV GER12_RS00450 PF02801 Beta-ketoacyl synthase, C-terminal domain GER12_RS00450 PF00109 Beta-ketoacyl synthase, N-terminal domain GER12_RS00455 PF00550 Phosphopantetheine attachment site GER12_RS00465 PF00698 Acyl transferase domain GER12_RS00470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GER12_RS00470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GER12_RS00475 PF02504 Fatty acid synthesis protein GER12_RS00480 PF01783 Ribosomal L32p protein family GER12_RS00485 PF02620 Large ribosomal RNA subunit accumulation protein YceD GER12_RS00490 PF02545 Maf-like protein GER12_RS00505 PF01479 S4 domain GER12_RS00505 PF00849 RNA pseudouridylate synthase GER12_RS00510 PF00575 S1 RNA binding domain GER12_RS00510 PF12111 Polyribonucleotide phosphorylase C terminal GER12_RS00510 PF10150 Ribonuclease E/G family GER12_RS00515 PF00669 Bacterial flagellin N-terminal helical region GER12_RS00520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GER12_RS00520 PF00460 Flagella basal body rod protein GER12_RS00525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GER12_RS00525 PF10135 Rod binding protein GER12_RS00530 PF02119 Flagellar P-ring protein GER12_RS00535 PF02107 Flagellar L-ring protein GER12_RS00540 PF00460 Flagella basal body rod protein GER12_RS00540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GER12_RS00545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GER12_RS00545 PF00460 Flagella basal body rod protein GER12_RS00550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GER12_RS00550 PF07559 Flagellar basal body protein FlaE GER12_RS00550 PF00460 Flagella basal body rod protein GER12_RS00555 PF03963 Flagellar hook capping protein - N-terminal region GER12_RS00555 PF13860 FlgD Ig-like domain GER12_RS00555 PF13861 FlgD Tudor-like domain GER12_RS00560 PF00460 Flagella basal body rod protein GER12_RS00560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GER12_RS00565 PF00460 Flagella basal body rod protein GER12_RS00570 PF13144 Chaperone for flagella basal body P-ring formation GER12_RS00575 PF04316 Anti-sigma-28 factor, FlgM GER12_RS00580 PF05130 FlgN protein GER12_RS00585 PF03023 Lipid II flippase MurJ GER12_RS00590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GER12_RS00595 PF04337 Protein of unknown function, DUF480 GER12_RS00600 PF13302 Acetyltransferase (GNAT) domain GER12_RS00605 PF07690 Major Facilitator Superfamily GER12_RS00610 PF13417 Glutathione S-transferase, N-terminal domain GER12_RS00610 PF04399 Glutaredoxin 2, C terminal domain GER12_RS00615 PF07273 Protein of unknown function (DUF1439) GER12_RS00620 PF01979 Amidohydrolase family GER12_RS00625 PF06183 DinI-like family GER12_RS00630 PF13991 BssS protein family GER12_RS00635 PF01266 FAD dependent oxidoreductase GER12_RS00640 PF10968 Protein of unknown function (DUF2770) GER12_RS00645 PF01292 Prokaryotic cytochrome b561 GER12_RS00650 PF04264 YceI-like domain GER12_RS00660 PF03279 Bacterial lipid A biosynthesis acyltransferase GER12_RS00665 PF07690 Major Facilitator Superfamily GER12_RS00670 PF13984 MsyB protein GER12_RS00675 PF07119 Protein of unknown function (DUF1375) GER12_RS00680 PF00535 Glycosyl transferase family 2 GER12_RS00685 PF04349 Periplasmic glucan biosynthesis protein, MdoG GER12_RS00690 PF01757 Acyltransferase family GER12_RS00695 PF13091 PLD-like domain GER12_RS00700 PF01661 Macro domain GER12_RS00710 PF10610 Thin aggregative fimbriae synthesis protein GER12_RS00715 PF07012 Curlin associated repeat GER12_RS00720 PF07012 Curlin associated repeat GER12_RS00725 PF00196 Bacterial regulatory proteins, luxR family GER12_RS00730 PF10627 Curli assembly protein CsgE GER12_RS00735 PF10614 Type VIII secretion system (T8SS), CsgF protein GER12_RS00740 PF03783 Curli production assembly/transport component CsgG GER12_RS00745 PF06496 Protein of unknown function (DUF1097) GER12_RS00750 PF02613 Nitrate reductase delta subunit GER12_RS00755 PF02811 PHP domain GER12_RS00760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GER12_RS00770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GER12_RS00770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GER12_RS00775 PF07690 Major Facilitator Superfamily GER12_RS00780 PF06178 Oligogalacturonate-specific porin protein (KdgM) GER12_RS00785 PF01344 Kelch motif GER12_RS00790 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GER12_RS00795 PF00474 Sodium:solute symporter family GER12_RS00800 PF01418 Helix-turn-helix domain, rpiR family GER12_RS00800 PF01380 SIS domain GER12_RS00805 PF02562 PhoH-like protein GER12_RS00810 PF00474 Sodium:solute symporter family GER12_RS00815 PF14850 DNA-binding domain of Proline dehydrogenase GER12_RS00815 PF01619 Proline dehydrogenase GER12_RS00815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GER12_RS00815 PF00171 Aldehyde dehydrogenase family GER12_RS00825 PF00440 Bacterial regulatory proteins, tetR family GER12_RS00825 PF08362 YcdC-like protein, C-terminal region GER12_RS00830 PF10685 Stress-induced bacterial acidophilic repeat motif GER12_RS00835 PF03358 NADPH-dependent FMN reductase GER12_RS00840 PF13993 YccJ-like protein GER12_RS00845 PF00328 Histidine phosphatase superfamily (branch 2) GER12_RS00850 PF00578 AhpC/TSA family GER12_RS00855 PF06965 Na+/H+ antiporter 1 GER12_RS00855 PF13462 Thioredoxin GER12_RS00860 PF11412 Disulphide bond corrector protein DsbC GER12_RS00860 PF13098 Thioredoxin-like domain GER12_RS00860 PF02683 Cytochrome C biogenesis protein transmembrane region GER12_RS00870 PF01556 DnaJ C terminal domain GER12_RS00870 PF00226 DnaJ domain GER12_RS00885 PF12706 Beta-lactamase superfamily domain GER12_RS00895 PF07690 Major Facilitator Superfamily GER12_RS00900 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS00905 PF01557 Fumarylacetoacetate (FAA) hydrolase family GER12_RS00910 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase GER12_RS00915 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GER12_RS00920 PF00171 Aldehyde dehydrogenase family GER12_RS00925 PF01557 Fumarylacetoacetate (FAA) hydrolase family GER12_RS00930 PF01047 MarR family GER12_RS00935 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GER12_RS00935 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GER12_RS00940 PF01613 Flavin reductase like domain GER12_RS00945 PF00576 HIUase/Transthyretin family GER12_RS00950 PF00486 Transcriptional regulatory protein, C terminal GER12_RS00950 PF00072 Response regulator receiver domain GER12_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS00955 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS00960 PF03577 Peptidase family C69 GER12_RS00970 PF13132 Domain of unknown function (DUF3950) GER12_RS00975 PF05925 Enterobacterial virulence protein IpgD GER12_RS00980 PF07824 Type III secretion chaperone domain GER12_RS00990 PF00805 Pentapeptide repeats (8 copies) GER12_RS01005 PF01027 Inhibitor of apoptosis-promoting Bax1 GER12_RS01010 PF04358 DsrC like protein GER12_RS01015 PF00708 Acylphosphatase GER12_RS01020 PF12833 Helix-turn-helix domain GER12_RS01025 PF01161 Phosphatidylethanolamine-binding protein GER12_RS01030 PF10672 S-adenosylmethionine-dependent methyltransferase GER12_RS01030 PF17785 PUA-like domain GER12_RS01035 PF08755 Hemimethylated DNA-binding protein YccV like GER12_RS01040 PF13380 CoA binding domain GER12_RS01045 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GER12_RS01050 PF02142 MGS-like domain GER12_RS01055 PF00580 UvrD/REP helicase N-terminal domain GER12_RS01055 PF12462 DNA helicase IV / RNA helicase N terminal GER12_RS01055 PF13361 UvrD-like helicase C-terminal domain GER12_RS01060 PF03733 Inner membrane component domain GER12_RS01065 PF12805 FUSC-like inner membrane protein yccS GER12_RS01070 PF04994 TfoX C-terminal domain GER12_RS01070 PF04993 TfoX N-terminal domain GER12_RS01075 PF03846 Cell division inhibitor SulA GER12_RS01080 PF01389 OmpA-like transmembrane domain GER12_RS01080 PF00691 OmpA family GER12_RS01085 PF17414 MatP C-terminal ribbon-helix-helix domain GER12_RS01085 PF06303 MatP N-terminal domain GER12_RS01090 PF13654 AAA domain GER12_RS01090 PF05362 Lon protease (S16) C-terminal proteolytic domain GER12_RS01095 PF07977 FabA-like domain GER12_RS01100 PF04957 Ribosome modulation factor GER12_RS01105 PF03886 ABC-type transport auxiliary lipoprotein component GER12_RS01110 PF02470 MlaD protein GER12_RS01115 PF04403 Paraquat-inducible protein A GER12_RS01120 PF12848 ABC transporter GER12_RS01120 PF00005 ABC transporter GER12_RS01120 PF16326 ABC transporter C-terminal domain GER12_RS01125 PF01170 Putative RNA methylase family UPF0020 GER12_RS01125 PF02926 THUMP domain GER12_RS01125 PF10672 S-adenosylmethionine-dependent methyltransferase GER12_RS01130 PF00111 2Fe-2S iron-sulfur cluster binding domain GER12_RS01130 PF03473 MOSC domain GER12_RS01130 PF03476 MOSC N-terminal beta barrel domain GER12_RS01135 PF07126 Cell-division protein ZapC GER12_RS01140 PF01180 Dihydroorotate dehydrogenase GER12_RS01145 PF11940 Domain of unknown function (DUF3458) Ig-like fold GER12_RS01145 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GER12_RS01145 PF01433 Peptidase family M1 domain GER12_RS01150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GER12_RS01150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GER12_RS01155 PF01235 Sodium:alanine symporter family GER12_RS01160 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS01165 PF01037 Lrp/AsnC ligand binding domain GER12_RS01165 PF13404 AsnC-type helix-turn-helix domain GER12_RS01170 PF01336 OB-fold nucleic acid binding domain GER12_RS01170 PF00152 tRNA synthetases class II (D, K and N) GER12_RS01180 PF00267 Gram-negative porin GER12_RS01185 PF00155 Aminotransferase class I and II GER12_RS01190 PF00753 Metallo-beta-lactamase superfamily GER12_RS01195 PF05951 Bacterial protein of unknown function (DUF882) GER12_RS01200 PF03734 L,D-transpeptidase catalytic domain GER12_RS01200 PF01471 Putative peptidoglycan binding domain GER12_RS01205 PF04310 MukB N-terminal GER12_RS01205 PF16330 MukB hinge domain GER12_RS01210 PF04288 MukE-like family GER12_RS01215 PF17192 MukF middle domain GER12_RS01215 PF03882 MukF winged-helix domain GER12_RS01215 PF17193 MukF C-terminal domain GER12_RS01220 PF13847 Methyltransferase domain GER12_RS01225 PF02698 DUF218 domain GER12_RS01230 PF01636 Phosphotransferase enzyme family GER12_RS01235 PF02348 Cytidylyltransferase GER12_RS01240 PF03966 Trm112p-like protein GER12_RS01245 PF06224 Winged helix DNA-binding domain GER12_RS01250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GER12_RS01255 PF00664 ABC transporter transmembrane region GER12_RS01255 PF00005 ABC transporter GER12_RS01260 PF03772 Competence protein GER12_RS01260 PF00753 Metallo-beta-lactamase superfamily GER12_RS01265 PF00216 Bacterial DNA-binding protein GER12_RS01270 PF00575 S1 RNA binding domain GER12_RS01275 PF02224 Cytidylate kinase GER12_RS01280 PF01435 Peptidase family M48 GER12_RS01285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GER12_RS01290 PF00266 Aminotransferase class-V GER12_RS01295 PF04239 Protein of unknown function (DUF421) GER12_RS01300 PF18381 YcaO cyclodehydratase C-terminal domain GER12_RS01300 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GER12_RS01305 PF01226 Formate/nitrite transporter GER12_RS01310 PF01228 Glycine radical GER12_RS01310 PF02901 Pyruvate formate lyase-like GER12_RS01315 PF11047 Salmonella outer protein D GER12_RS01325 PF04055 Radical SAM superfamily GER12_RS01330 PF13520 Amino acid permease GER12_RS01335 PF07690 Major Facilitator Superfamily GER12_RS01340 PF04976 DMSO reductase anchor subunit (DmsC) GER12_RS01345 PF12800 4Fe-4S binding domain GER12_RS01345 PF13247 4Fe-4S dicluster domain GER12_RS01350 PF01568 Molydopterin dinucleotide binding domain GER12_RS01350 PF00384 Molybdopterin oxidoreductase GER12_RS01350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS01355 PF02403 Seryl-tRNA synthetase N-terminal domain GER12_RS01355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GER12_RS01360 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS01360 PF12002 MgsA AAA+ ATPase C terminal GER12_RS01360 PF16193 AAA C-terminal domain GER12_RS01365 PF03548 Outer membrane lipoprotein carrier protein LolA GER12_RS01370 PF01580 FtsK/SpoIIIE family GER12_RS01370 PF09397 Ftsk gamma domain GER12_RS01370 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GER12_RS01370 PF17854 FtsK alpha domain GER12_RS01375 PF01037 Lrp/AsnC ligand binding domain GER12_RS01380 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS01385 PF00664 ABC transporter transmembrane region GER12_RS01385 PF00005 ABC transporter GER12_RS01390 PF00005 ABC transporter GER12_RS01390 PF00664 ABC transporter transmembrane region GER12_RS01395 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GER12_RS01405 PF01176 Translation initiation factor 1A / IF-1 GER12_RS01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS01410 PF03466 LysR substrate binding domain GER12_RS01415 PF05726 Pirin C-terminal cupin domain GER12_RS01415 PF02678 Pirin GER12_RS01420 PF00857 Isochorismatase family GER12_RS01490 PF05732 Firmicute plasmid replication protein (RepL) GER12_RS01505 PF00816 H-NS histone family GER12_RS01535 PF00589 Phage integrase family GER12_RS01535 PF13356 Arm DNA-binding domain GER12_RS01550 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS01550 PF10431 C-terminal, D2-small domain, of ClpB protein GER12_RS01550 PF07724 AAA domain (Cdc48 subfamily) GER12_RS01550 PF17871 AAA lid domain GER12_RS01550 PF02861 Clp amino terminal domain, pathogenicity island component GER12_RS01555 PF02617 ATP-dependent Clp protease adaptor protein ClpS GER12_RS01560 PF00313 'Cold-shock' DNA-binding domain GER12_RS01565 PF12704 MacB-like periplasmic core domain GER12_RS01565 PF02687 FtsX-like permease family GER12_RS01565 PF00005 ABC transporter GER12_RS01570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS01575 PF04393 Protein of unknown function (DUF535) GER12_RS01580 PF11398 Protein of unknown function (DUF2813) GER12_RS01585 PF03956 Lysine exporter LysO GER12_RS01590 PF03063 Prismane/CO dehydrogenase family GER12_RS01595 PF00111 2Fe-2S iron-sulfur cluster binding domain GER12_RS01595 PF00175 Oxidoreductase NAD-binding domain GER12_RS01595 PF00970 Oxidoreductase FAD-binding domain GER12_RS01600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS01600 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS01600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS01605 PF01212 Beta-eliminating lyase GER12_RS01610 PF11066 Protein of unknown function (DUF2867) GER12_RS01610 PF13460 NAD(P)H-binding GER12_RS01615 PF01370 NAD dependent epimerase/dehydratase family GER12_RS01620 PF01510 N-acetylmuramoyl-L-alanine amidase GER12_RS01625 PF01906 Putative heavy-metal-binding GER12_RS01630 PF12883 Protein of unknown function (DUF3828) GER12_RS01635 PF00005 ABC transporter GER12_RS01640 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS01645 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01650 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01655 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS01670 PF03611 PTS system sugar-specific permease component GER12_RS01675 PF05958 tRNA (Uracil-5-)-methyltransferase GER12_RS01680 PF10767 Protein of unknown function (DUF2593) GER12_RS01685 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01690 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01695 PF00005 ABC transporter GER12_RS01695 PF08402 TOBE domain GER12_RS01700 PF13416 Bacterial extracellular solute-binding protein GER12_RS01705 PF10722 Putative bacterial sensory transduction regulator GER12_RS01710 PF08443 RimK-like ATP-grasp domain GER12_RS01710 PF18030 RimK PreATP-grasp domain GER12_RS01715 PF00881 Nitroreductase family GER12_RS01720 PF07214 Protein of unknown function (DUF1418) GER12_RS01725 PF00462 Glutaredoxin GER12_RS01730 PF11045 Putative inner membrane protein of Enterobacteriaceae GER12_RS01735 PF02080 TrkA-C domain GER12_RS01735 PF06826 Predicted Permease Membrane Region GER12_RS01740 PF00440 Bacterial regulatory proteins, tetR family GER12_RS01745 PF07690 Major Facilitator Superfamily GER12_RS01755 PF07690 Major Facilitator Superfamily GER12_RS01760 PF01569 PAP2 superfamily GER12_RS01765 PF00455 DeoR C terminal sensor domain GER12_RS01765 PF08220 DeoR-like helix-turn-helix domain GER12_RS01770 PF07943 Penicillin-binding protein 5, C-terminal domain GER12_RS01770 PF00768 D-alanyl-D-alanine carboxypeptidase GER12_RS01775 PF00043 Glutathione S-transferase, C-terminal domain GER12_RS01775 PF13417 Glutathione S-transferase, N-terminal domain GER12_RS01780 PF07995 Glucose / Sorbosone dehydrogenase GER12_RS01790 PF03466 LysR substrate binding domain GER12_RS01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS01800 PF02770 Acyl-CoA dehydrogenase, middle domain GER12_RS01800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GER12_RS01800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GER12_RS01810 PF00766 Electron transfer flavoprotein FAD-binding domain GER12_RS01810 PF01012 Electron transfer flavoprotein domain GER12_RS01815 PF01012 Electron transfer flavoprotein domain GER12_RS01820 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS01825 PF10799 Biofilm formation protein (YliH/bssR) GER12_RS01830 PF04055 Radical SAM superfamily GER12_RS01830 PF18693 TRAM domain GER12_RS01830 PF00919 Uncharacterized protein family UPF0004 GER12_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01835 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS01840 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS01850 PF00005 ABC transporter GER12_RS01850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS01855 PF01112 Asparaginase GER12_RS01860 PF03454 MoeA C-terminal region (domain IV) GER12_RS01860 PF03453 MoeA N-terminal region (domain I and II) GER12_RS01860 PF00994 Probable molybdopterin binding domain GER12_RS01865 PF00899 ThiF family GER12_RS01870 PF04055 Radical SAM superfamily GER12_RS01875 PF01228 Glycine radical GER12_RS01875 PF02901 Pyruvate formate lyase-like GER12_RS01885 PF07350 Protein of unknown function (DUF1479) GER12_RS01900 PF00005 ABC transporter GER12_RS01900 PF12848 ABC transporter GER12_RS01905 PF17969 L,D-transpeptidase C-terminal domain GER12_RS01905 PF03734 L,D-transpeptidase catalytic domain GER12_RS01910 PF03600 Citrate transporter GER12_RS01915 PF01325 Iron dependent repressor, N-terminal DNA binding domain GER12_RS01915 PF02742 Iron dependent repressor, metal binding and dimerisation domain GER12_RS01925 PF00884 Sulfatase GER12_RS01930 PF13505 Outer membrane protein beta-barrel domain GER12_RS01935 PF00892 EamA-like transporter family GER12_RS01940 PF00210 Ferritin-like domain GER12_RS01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS01950 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS01955 PF00005 ABC transporter GER12_RS01960 PF00924 Mechanosensitive ion channel GER12_RS01965 PF05971 RNA methyltransferase GER12_RS01970 PF01258 Prokaryotic dksA/traR C4-type zinc finger GER12_RS01975 PF07338 Protein of unknown function (DUF1471) GER12_RS01980 PF02885 Glycosyl transferase family, helical bundle domain GER12_RS01985 PF13307 Helicase C-terminal domain GER12_RS01985 PF06733 DEAD_2 GER12_RS01990 PF00271 Helicase conserved C-terminal domain GER12_RS01990 PF00270 DEAD/DEAH box helicase GER12_RS01995 PF09209 Tetracyclin repressor-like, C-terminal domain GER12_RS01995 PF00440 Bacterial regulatory proteins, tetR family GER12_RS02000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS02005 PF00005 ABC transporter GER12_RS02020 PF11076 Putative inner membrane protein YbhQ GER12_RS02025 PF03372 Endonuclease/Exonuclease/phosphatase family GER12_RS02030 PF13091 PLD-like domain GER12_RS02035 PF03706 Lysylphosphatidylglycerol synthase TM region GER12_RS02055 PF01027 Inhibitor of apoptosis-promoting Bax1 GER12_RS02060 PF02391 MoaE protein GER12_RS02065 PF02597 ThiS family GER12_RS02070 PF01967 MoaC family GER12_RS02075 PF00994 Probable molybdopterin binding domain GER12_RS02080 PF06463 Molybdenum Cofactor Synthesis C GER12_RS02080 PF04055 Radical SAM superfamily GER12_RS02085 PF01933 Uncharacterised protein family UPF0052 GER12_RS02090 PF14496 C-terminal novel E3 ligase, LRR-interacting GER12_RS02090 PF12468 Type III secretion system leucine rich repeat protein GER12_RS02095 PF02151 UvrB/uvrC motif GER12_RS02095 PF12344 Ultra-violet resistance protein B GER12_RS02095 PF00271 Helicase conserved C-terminal domain GER12_RS02095 PF17757 UvrB interaction domain GER12_RS02095 PF04851 Type III restriction enzyme, res subunit GER12_RS02105 PF08241 Methyltransferase domain GER12_RS02110 PF00155 Aminotransferase class I and II GER12_RS02115 PF06968 Biotin and Thiamin Synthesis associated domain GER12_RS02115 PF04055 Radical SAM superfamily GER12_RS02120 PF00202 Aminotransferase class-III GER12_RS02125 PF01161 Phosphatidylethanolamine-binding protein GER12_RS02130 PF00221 Aromatic amino acid lyase GER12_RS02135 PF17391 Urocanase N-terminal domain GER12_RS02135 PF17392 Urocanase C-terminal domain GER12_RS02135 PF01175 Urocanase Rossmann-like domain GER12_RS02140 PF00392 Bacterial regulatory proteins, gntR family GER12_RS02140 PF07702 UTRA domain GER12_RS02145 PF00491 Arginase family GER12_RS02150 PF01979 Amidohydrolase family GER12_RS02155 PF01095 Pectinesterase GER12_RS02160 PF10282 Lactonase, 7-bladed beta-propeller GER12_RS02170 PF00005 ABC transporter GER12_RS02170 PF03459 TOBE domain GER12_RS02175 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS02185 PF10766 Multidrug efflux pump-associated protein AcrZ GER12_RS02190 PF03459 TOBE domain GER12_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS02195 PF00005 ABC transporter GER12_RS02205 PF16363 GDP-mannose 4,6 dehydratase GER12_RS02210 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GER12_RS02210 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GER12_RS02215 PF00288 GHMP kinases N terminal domain GER12_RS02215 PF10509 Galactokinase galactose-binding signature GER12_RS02215 PF08544 GHMP kinases C terminal GER12_RS02220 PF01263 Aldose 1-epimerase GER12_RS02225 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS02230 PF00005 ABC transporter GER12_RS02235 PF01032 FecCD transport family GER12_RS02240 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GER12_RS02245 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GER12_RS02250 PF02436 Conserved carboxylase domain GER12_RS02250 PF00682 HMGL-like GER12_RS02250 PF00364 Biotin-requiring enzyme GER12_RS02255 PF04277 Oxaloacetate decarboxylase, gamma chain GER12_RS02260 PF02080 TrkA-C domain GER12_RS02260 PF03600 Citrate transporter GER12_RS02265 PF03466 LysR substrate binding domain GER12_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS02270 PF03466 LysR substrate binding domain GER12_RS02275 PF05681 Fumarate hydratase (Fumerase) GER12_RS02280 PF05681 Fumarate hydratase (Fumerase) GER12_RS02280 PF05683 Fumarase C-terminus GER12_RS02285 PF00793 DAHP synthetase I family GER12_RS02290 PF13985 YbgS-like protein GER12_RS02295 PF01545 Cation efflux family GER12_RS02300 PF04973 Nicotinamide mononucleotide transporter GER12_RS02305 PF02445 Quinolinate synthetase A protein GER12_RS02335 PF16331 TolA binding protein trimerisation GER12_RS02335 PF13174 Tetratricopeptide repeat GER12_RS02340 PF00691 OmpA family GER12_RS02345 PF04052 TolB amino-terminal domain GER12_RS02345 PF07676 WD40-like Beta Propeller Repeat GER12_RS02350 PF06519 TolA C-terminal GER12_RS02355 PF02472 Biopolymer transport protein ExbD/TolR GER12_RS02360 PF01618 MotA/TolQ/ExbB proton channel family GER12_RS02365 PF03061 Thioesterase superfamily GER12_RS02370 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GER12_RS02375 PF08173 Membrane bound YbgT-like protein GER12_RS02380 PF02322 Cytochrome bd terminal oxidase subunit II GER12_RS02385 PF01654 Cytochrome bd terminal oxidase subunit I GER12_RS02390 PF02629 CoA binding domain GER12_RS02390 PF00549 CoA-ligase GER12_RS02395 PF00549 CoA-ligase GER12_RS02395 PF08442 ATP-grasp domain GER12_RS02400 PF02817 e3 binding domain GER12_RS02400 PF00364 Biotin-requiring enzyme GER12_RS02400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GER12_RS02405 PF16078 2-oxoglutarate dehydrogenase N-terminus GER12_RS02405 PF02779 Transketolase, pyrimidine binding domain GER12_RS02405 PF16870 2-oxoglutarate dehydrogenase C-terminal GER12_RS02405 PF00676 Dehydrogenase E1 component GER12_RS02410 PF13085 2Fe-2S iron-sulfur cluster binding domain GER12_RS02415 PF00890 FAD binding domain GER12_RS02415 PF02910 Fumarate reductase flavoprotein C-term GER12_RS02420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GER12_RS02425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GER12_RS02435 PF00285 Citrate synthase, C-terminal domain GER12_RS02440 PF05145 Transition state regulatory protein AbrB GER12_RS02445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GER12_RS02445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GER12_RS02445 PF06827 Zinc finger found in FPG and IleRS GER12_RS02465 PF17994 Galactofuranosyltransferase 2 N-terminal GER12_RS02470 PF00005 ABC transporter GER12_RS02475 PF01061 ABC-2 type transporter GER12_RS02490 PF03275 UDP-galactopyranose mutase GER12_RS02505 PF00589 Phage integrase family GER12_RS02515 PF03746 LamB/YcsF family GER12_RS02520 PF02626 Carboxyltransferase domain, subdomain A and B GER12_RS02525 PF02682 Carboxyltransferase domain, subdomain C and D GER12_RS02530 PF01784 NIF3 (NGG1p interacting factor 3) GER12_RS02535 PF00854 POT family GER12_RS02540 PF03441 FAD binding domain of DNA photolyase GER12_RS02540 PF00875 DNA photolyase GER12_RS02545 PF10725 Protein of unknown function (DUF2517) GER12_RS02550 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) GER12_RS02555 PF03814 Potassium-transporting ATPase A subunit GER12_RS02565 PF02669 K+-transporting ATPase, c chain GER12_RS02570 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS02570 PF13492 GAF domain GER12_RS02570 PF13493 Domain of unknown function (DUF4118) GER12_RS02570 PF02702 Osmosensitive K+ channel His kinase sensor domain GER12_RS02575 PF00486 Transcriptional regulatory protein, C terminal GER12_RS02575 PF00072 Response regulator receiver domain GER12_RS02585 PF01276 Orn/Lys/Arg decarboxylase, major domain GER12_RS02585 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GER12_RS02585 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GER12_RS02590 PF13520 Amino acid permease GER12_RS02600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GER12_RS02600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GER12_RS02600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GER12_RS02600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GER12_RS02605 PF17206 SeqA protein N-terminal domain GER12_RS02605 PF03925 SeqA protein C-terminal domain GER12_RS02610 PF12697 Alpha/beta hydrolase family GER12_RS02615 PF01402 Ribbon-helix-helix protein, copG family GER12_RS02620 PF00258 Flavodoxin GER12_RS02625 PF01475 Ferric uptake regulator family GER12_RS02630 PF03466 LysR substrate binding domain GER12_RS02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS02635 PF00890 FAD binding domain GER12_RS02635 PF14537 Cytochrome c3 GER12_RS02645 PF07690 Major Facilitator Superfamily GER12_RS02650 PF13982 YbfN-like lipoprotein GER12_RS02655 PF03573 outer membrane porin, OprD family GER12_RS02660 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GER12_RS02660 PF00749 tRNA synthetases class I (E and Q), catalytic domain GER12_RS02665 PF00367 phosphotransferase system, EIIB GER12_RS02665 PF02378 Phosphotransferase system, EIIC GER12_RS02665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GER12_RS02670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GER12_RS02675 PF01979 Amidohydrolase family GER12_RS02680 PF01047 MarR family GER12_RS02680 PF00480 ROK family GER12_RS02685 PF13344 Haloacid dehalogenase-like hydrolase GER12_RS02690 PF13537 Glutamine amidotransferase domain GER12_RS02690 PF00733 Asparagine synthase GER12_RS02730 PF01494 FAD binding domain GER12_RS02735 PF00919 Uncharacterized protein family UPF0004 GER12_RS02735 PF01938 TRAM domain GER12_RS02735 PF04055 Radical SAM superfamily GER12_RS02740 PF02562 PhoH-like protein GER12_RS02745 PF02130 Uncharacterized protein family UPF0054 GER12_RS02750 PF03471 Transporter associated domain GER12_RS02750 PF00571 CBS domain GER12_RS02755 PF00795 Carbon-nitrogen hydrolase GER12_RS02760 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS02775 PF00005 ABC transporter GER12_RS02780 PF01156 Inosine-uridine preferring nucleoside hydrolase GER12_RS02790 PF00012 Hsp70 protein GER12_RS02800 PF06889 Protein of unknown function (DUF1266) GER12_RS02810 PF06889 Protein of unknown function (DUF1266) GER12_RS02820 PF07295 Zinc-ribbon containing domain GER12_RS02825 PF02954 Bacterial regulatory protein, Fis family GER12_RS02825 PF00989 PAS fold GER12_RS02825 PF00158 Sigma-54 interaction domain GER12_RS02830 PF03812 2-keto-3-deoxygluconate permease GER12_RS02835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GER12_RS02845 PF13603 Leucyl-tRNA synthetase, Domain 2 GER12_RS02845 PF00133 tRNA synthetases class I (I, L, M and V) GER12_RS02845 PF08264 Anticodon-binding domain of tRNA GER12_RS02850 PF04390 Lipopolysaccharide-assembly GER12_RS02855 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GER12_RS02855 PF06144 DNA polymerase III, delta subunit GER12_RS02860 PF01467 Cytidylyltransferase-like GER12_RS02865 PF00155 Aminotransferase class I and II GER12_RS02870 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS02880 PF02590 Predicted SPOUT methyltransferase GER12_RS02885 PF03717 Penicillin-binding Protein dimerisation domain GER12_RS02885 PF00905 Penicillin binding protein transpeptidase domain GER12_RS02890 PF01098 Cell cycle protein GER12_RS02895 PF03330 Lytic transglycolase GER12_RS02895 PF05036 Sporulation related domain GER12_RS02900 PF00768 D-alanyl-D-alanine carboxypeptidase GER12_RS02900 PF07943 Penicillin-binding protein 5, C-terminal domain GER12_RS02905 PF04359 Protein of unknown function (DUF493) GER12_RS02910 PF03099 Biotin/lipoate A/B protein ligase family GER12_RS02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS02915 PF03466 LysR substrate binding domain GER12_RS02920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GER12_RS02920 PF04055 Radical SAM superfamily GER12_RS02925 PF02416 mttA/Hcf106 family GER12_RS02930 PF00795 Carbon-nitrogen hydrolase GER12_RS02935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GER12_RS02940 PF00313 'Cold-shock' DNA-binding domain GER12_RS02945 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP GER12_RS02950 PF03606 C4-dicarboxylate anaerobic carrier GER12_RS02955 PF00072 Response regulator receiver domain GER12_RS02955 PF12431 Transcriptional regulator GER12_RS02960 PF00989 PAS fold GER12_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS02960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GER12_RS02960 PF17203 Single cache domain 3 GER12_RS02965 PF08218 Citrate lyase ligase C-terminal domain GER12_RS02970 PF06857 Malonate decarboxylase delta subunit (MdcD) GER12_RS02975 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS02980 PF04223 Citrate lyase, alpha subunit (CitF) GER12_RS02985 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GER12_RS02990 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GER12_RS02995 PF00939 Sodium:sulfate symporter transmembrane region GER12_RS03000 PF00445 Ribonuclease T2 family GER12_RS03005 PF14760 Rnk N-terminus GER12_RS03005 PF01272 Transcription elongation factor, GreA/GreB, C-term GER12_RS03010 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS03010 PF00107 Zinc-binding dehydrogenase GER12_RS03010 PF13823 Alcohol dehydrogenase GroES-associated GER12_RS03015 PF00582 Universal stress protein family GER12_RS03025 PF13247 4Fe-4S dicluster domain GER12_RS03030 PF01568 Molydopterin dinucleotide binding domain GER12_RS03030 PF00384 Molybdopterin oxidoreductase GER12_RS03030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS03040 PF13192 Thioredoxin domain GER12_RS03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS03045 PF00578 AhpC/TSA family GER12_RS03045 PF10417 C-terminal domain of 1-Cys peroxiredoxin GER12_RS03050 PF13098 Thioredoxin-like domain GER12_RS03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS03055 PF03466 LysR substrate binding domain GER12_RS03060 PF11922 Domain of unknown function (DUF3440) GER12_RS03060 PF01507 Phosphoadenosine phosphosulfate reductase family GER12_RS03065 PF02195 ParB-like nuclease domain GER12_RS03070 PF00155 Aminotransferase class I and II GER12_RS03075 PF00465 Iron-containing alcohol dehydrogenase GER12_RS03080 PF04328 Selenoprotein, putative GER12_RS03085 PF02554 Carbon starvation protein CstA GER12_RS03085 PF13722 5TM C-terminal transporter carbon starvation CstA GER12_RS03090 PF03061 Thioesterase superfamily GER12_RS03100 PF00550 Phosphopantetheine attachment site GER12_RS03100 PF00857 Isochorismatase family GER12_RS03105 PF00501 AMP-binding enzyme GER12_RS03105 PF13193 AMP-binding enzyme C-terminal domain GER12_RS03110 PF00425 chorismate binding enzyme GER12_RS03115 PF01497 Periplasmic binding protein GER12_RS03120 PF05977 Transmembrane secretion effector GER12_RS03125 PF01032 FecCD transport family GER12_RS03130 PF01032 FecCD transport family GER12_RS03135 PF00005 ABC transporter GER12_RS03140 PF02706 Chain length determinant protein GER12_RS03145 PF00975 Thioesterase domain GER12_RS03145 PF00550 Phosphopantetheine attachment site GER12_RS03145 PF00668 Condensation domain GER12_RS03145 PF13193 AMP-binding enzyme C-terminal domain GER12_RS03145 PF00501 AMP-binding enzyme GER12_RS03150 PF03621 MbtH-like protein GER12_RS03155 PF00756 Putative esterase GER12_RS03155 PF11806 Domain of unknown function (DUF3327) GER12_RS03160 PF07715 TonB-dependent Receptor Plug Domain GER12_RS03160 PF00593 TonB dependent receptor GER12_RS03165 PF01648 4'-phosphopantetheinyl transferase superfamily GER12_RS03165 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GER12_RS03170 PF04107 Glutamate-cysteine ligase family 2(GCS2) GER12_RS03175 PF06643 Protein of unknown function (DUF1158) GER12_RS03180 PF12833 Helix-turn-helix domain GER12_RS03185 PF16295 Tetracyclin repressor-like, C-terminal domain GER12_RS03185 PF00440 Bacterial regulatory proteins, tetR family GER12_RS03190 PF04237 YjbR GER12_RS03195 PF00881 Nitroreductase family GER12_RS03205 PF03830 PTS system sorbose subfamily IIB component GER12_RS03215 PF03613 PTS system mannose/fructose/sorbose family IID component GER12_RS03225 PF01380 SIS domain GER12_RS03230 PF03610 PTS system fructose IIA component GER12_RS03230 PF00874 PRD domain GER12_RS03230 PF00158 Sigma-54 interaction domain GER12_RS03235 PF00657 GDSL-like Lipase/Acylhydrolase GER12_RS03235 PF03797 Autotransporter beta-domain GER12_RS03240 PF00924 Mechanosensitive ion channel GER12_RS03245 PF00324 Amino acid permease GER12_RS03255 PF04224 Protein of unknown function, DUF417 GER12_RS03260 PF07338 Protein of unknown function (DUF1471) GER12_RS03265 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS03265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GER12_RS03270 PF12833 Helix-turn-helix domain GER12_RS03270 PF12852 Cupin GER12_RS03280 PF00196 Bacterial regulatory proteins, luxR family GER12_RS03295 PF00196 Bacterial regulatory proteins, luxR family GER12_RS03295 PF00072 Response regulator receiver domain GER12_RS03300 PF00419 Fimbrial protein GER12_RS03305 PF00419 Fimbrial protein GER12_RS03310 PF13954 PapC N-terminal domain GER12_RS03310 PF00577 Outer membrane usher protein GER12_RS03310 PF13953 PapC C-terminal domain GER12_RS03315 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS03315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS03325 PF00419 Fimbrial protein GER12_RS03330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GER12_RS03330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GER12_RS03340 PF04307 LexA-binding, inner membrane-associated putative hydrolase GER12_RS03355 PF01406 tRNA synthetases class I (C) catalytic domain GER12_RS03355 PF09190 DALR domain GER12_RS03360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GER12_RS03365 PF12850 Calcineurin-like phosphoesterase superfamily domain GER12_RS03370 PF00731 AIR carboxylase GER12_RS03375 PF02222 ATP-grasp domain GER12_RS03375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GER12_RS03380 PF00696 Amino acid kinase family GER12_RS03385 PF11392 Protein of unknown function (DUF2877) GER12_RS03390 PF06545 Protein of unknown function (DUF1116) GER12_RS03395 PF00549 CoA-ligase GER12_RS03395 PF02629 CoA binding domain GER12_RS03400 PF02615 Malate/L-lactate dehydrogenase GER12_RS03405 PF01546 Peptidase family M20/M25/M40 GER12_RS03410 PF07883 Cupin domain GER12_RS03410 PF05899 Protein of unknown function (DUF861) GER12_RS03415 PF02595 Glycerate kinase family GER12_RS03420 PF00860 Permease family GER12_RS03425 PF01979 Amidohydrolase family GER12_RS03430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GER12_RS03440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GER12_RS03440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GER12_RS03445 PF01261 Xylose isomerase-like TIM barrel GER12_RS03450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS03450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS03450 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS03455 PF01614 Bacterial transcriptional regulator GER12_RS03455 PF09339 IclR helix-turn-helix domain GER12_RS03460 PF04115 Ureidoglycolate lyase GER12_RS03465 PF03466 LysR substrate binding domain GER12_RS03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS03475 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS03480 PF09383 NIL domain GER12_RS03480 PF00005 ABC transporter GER12_RS03485 PF03180 NLPA lipoprotein GER12_RS03500 PF00005 ABC transporter GER12_RS03505 PF13472 GDSL-like Lipase/Acylhydrolase family GER12_RS03510 PF00106 short chain dehydrogenase GER12_RS03515 PF00085 Thioredoxin GER12_RS03520 PF03649 Uncharacterised protein family (UPF0014) GER12_RS03525 PF00005 ABC transporter GER12_RS03530 PF16200 C-terminal region of band_7 GER12_RS03530 PF01145 SPFH domain / Band 7 family GER12_RS03535 PF01957 NfeD-like C-terminal, partner-binding GER12_RS03540 PF13411 MerR HTH family regulatory protein GER12_RS03545 PF00403 Heavy-metal-associated domain GER12_RS03555 PF01963 TraB family GER12_RS03560 PF04073 Aminoacyl-tRNA editing domain GER12_RS03565 PF02872 5'-nucleotidase, C-terminal domain GER12_RS03565 PF00149 Calcineurin-like phosphoesterase GER12_RS03570 PF07690 Major Facilitator Superfamily GER12_RS03575 PF02254 TrkA-N domain GER12_RS03575 PF00999 Sodium/hydrogen exchanger family GER12_RS03580 PF00294 pfkB family carbohydrate kinase GER12_RS03585 PF07859 alpha/beta hydrolase fold GER12_RS03590 PF00762 Ferrochelatase GER12_RS03595 PF05191 Adenylate kinase, active site lid GER12_RS03600 PF00183 Hsp90 protein GER12_RS03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS03605 PF02132 RecR protein GER12_RS03605 PF13662 Toprim domain GER12_RS03610 PF02575 YbaB/EbfC DNA-binding family GER12_RS03615 PF12169 DNA polymerase III subunits gamma and tau domain III GER12_RS03615 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GER12_RS03615 PF12170 DNA polymerase III tau subunit V interacting with alpha GER12_RS03620 PF00156 Phosphoribosyl transferase domain GER12_RS03625 PF04304 Protein of unknown function (DUF454) GER12_RS03630 PF07445 Primosomal replication protein priC GER12_RS03635 PF10689 Protein of unknown function (DUF2496) GER12_RS03640 PF04754 Putative transposase, YhgA-like GER12_RS03645 PF12795 Mechanosensitive ion channel porin domain GER12_RS03645 PF00924 Mechanosensitive ion channel GER12_RS03645 PF12794 Mechanosensitive ion channel inner membrane domain 1 GER12_RS03650 PF00440 Bacterial regulatory proteins, tetR family GER12_RS03650 PF08361 MAATS-type transcriptional repressor, C-terminal region GER12_RS03655 PF00529 HlyD membrane-fusion protein of T1SS GER12_RS03655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS03660 PF00873 AcrB/AcrD/AcrF family GER12_RS03665 PF10757 Biofilm formation regulator YbaJ GER12_RS03670 PF05321 Haemolysin expression modulating protein GER12_RS03675 PF12464 Maltose acetyltransferase GER12_RS03675 PF14602 Hexapeptide repeat of succinyl-transferase GER12_RS03680 PF10777 Inner membrane protein YlaC GER12_RS03685 PF00444 Ribosomal protein L36 GER12_RS03690 PF01197 Ribosomal protein L31 GER12_RS03695 PF12792 CSS motif domain associated with EAL GER12_RS03695 PF00563 EAL domain GER12_RS03705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GER12_RS03710 PF09619 Type III secretion system lipoprotein chaperone (YscW) GER12_RS03720 PF00909 Ammonium Transporter Family GER12_RS03725 PF00543 Nitrogen regulatory protein P-II GER12_RS03730 PF00005 ABC transporter GER12_RS03730 PF00664 ABC transporter transmembrane region GER12_RS03735 PF00664 ABC transporter transmembrane region GER12_RS03735 PF00005 ABC transporter GER12_RS03740 PF13404 AsnC-type helix-turn-helix domain GER12_RS03740 PF01037 Lrp/AsnC ligand binding domain GER12_RS03755 PF12793 Sugar transport-related sRNA regulator N-term GER12_RS03755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS03760 PF06508 Queuosine biosynthesis protein QueC GER12_RS03775 PF13145 PPIC-type PPIASE domain GER12_RS03780 PF00216 Bacterial DNA-binding protein GER12_RS03785 PF02190 ATP-dependent protease La (LON) substrate-binding domain GER12_RS03785 PF05362 Lon protease (S16) C-terminal proteolytic domain GER12_RS03785 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS03790 PF06689 ClpX C4-type zinc finger GER12_RS03790 PF10431 C-terminal, D2-small domain, of ClpB protein GER12_RS03790 PF07724 AAA domain (Cdc48 subfamily) GER12_RS03795 PF00574 Clp protease GER12_RS03800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GER12_RS03800 PF05697 Bacterial trigger factor protein (TF) GER12_RS03800 PF05698 Bacterial trigger factor protein (TF) C-terminus GER12_RS03805 PF01722 BolA-like protein GER12_RS03810 PF03923 Uncharacterized lipoprotein GER12_RS03810 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GER12_RS03815 PF07690 Major Facilitator Superfamily GER12_RS03820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GER12_RS03820 PF06481 COX Aromatic Rich Motif GER12_RS03825 PF00115 Cytochrome C and Quinol oxidase polypeptide I GER12_RS03830 PF00510 Cytochrome c oxidase subunit III GER12_RS03835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GER12_RS03840 PF01040 UbiA prenyltransferase family GER12_RS03855 PF07690 Major Facilitator Superfamily GER12_RS03860 PF04461 Protein of unknown function (DUF520) GER12_RS03865 PF02558 Ketopantoate reductase PanE/ApbA GER12_RS03865 PF08546 Ketopantoate reductase PanE/ApbA C terminal GER12_RS03870 PF01965 DJ-1/PfpI family GER12_RS03880 PF00266 Aminotransferase class-V GER12_RS03885 PF00392 Bacterial regulatory proteins, gntR family GER12_RS03885 PF07702 UTRA domain GER12_RS03890 PF01547 Bacterial extracellular solute-binding protein GER12_RS03895 PF08402 TOBE domain GER12_RS03895 PF00005 ABC transporter GER12_RS03900 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS03905 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS03910 PF02926 THUMP domain GER12_RS03910 PF02568 Thiamine biosynthesis protein (ThiI) GER12_RS03915 PF02609 Exonuclease VII small subunit GER12_RS03920 PF00348 Polyprenyl synthetase GER12_RS03925 PF02780 Transketolase, C-terminal domain GER12_RS03925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GER12_RS03925 PF02779 Transketolase, pyrimidine binding domain GER12_RS03930 PF00248 Aldo/keto reductase family GER12_RS03935 PF04608 Phosphatidylglycerophosphatase A GER12_RS03940 PF02769 AIR synthase related protein, C-terminal domain GER12_RS03940 PF00586 AIR synthase related protein, N-terminal domain GER12_RS03945 PF01029 NusB family GER12_RS03950 PF00885 6,7-dimethyl-8-ribityllumazine synthase GER12_RS03955 PF01872 RibD C-terminal domain GER12_RS03955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GER12_RS03960 PF03477 ATP cone domain GER12_RS03965 PF11622 Protein of unknown function (DUF3251) GER12_RS03970 PF03502 Nucleoside-specific channel-forming protein, Tsx GER12_RS03980 PF01844 HNH endonuclease GER12_RS03995 PF02355 Protein export membrane protein GER12_RS03995 PF07549 SecD/SecF GG Motif GER12_RS04000 PF07549 SecD/SecF GG Motif GER12_RS04000 PF02355 Protein export membrane protein GER12_RS04000 PF13721 SecD export protein N-terminal TM region GER12_RS04005 PF02699 Preprotein translocase subunit GER12_RS04010 PF01702 Queuine tRNA-ribosyltransferase GER12_RS04015 PF02547 Queuosine biosynthesis protein GER12_RS04020 PF04336 Acyl carrier protein phosphodiesterase GER12_RS04025 PF00578 AhpC/TSA family GER12_RS04025 PF10417 C-terminal domain of 1-Cys peroxiredoxin GER12_RS04030 PF00128 Alpha amylase, catalytic domain GER12_RS04030 PF02903 Alpha amylase, N-terminal ig-like domain GER12_RS04035 PF00324 Amino acid permease GER12_RS04040 PF05525 Branched-chain amino acid transport protein GER12_RS04045 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS04045 PF11808 Phosphate regulon sensor protein PhoR GER12_RS04045 PF00989 PAS fold GER12_RS04050 PF00486 Transcriptional regulatory protein, C terminal GER12_RS04050 PF00072 Response regulator receiver domain GER12_RS04055 PF12320 Type 5 capsule protein repressor C-terminal domain GER12_RS04055 PF00149 Calcineurin-like phosphoesterase GER12_RS04060 PF13476 AAA domain GER12_RS04065 PF07690 Major Facilitator Superfamily GER12_RS04070 PF00480 ROK family GER12_RS04075 PF04381 Putative exonuclease, RdgC GER12_RS04080 PF06865 Pyrimidine/purine nucleoside phosphorylase GER12_RS04085 PF07302 AroM protein GER12_RS04090 PF16362 YaiA protein GER12_RS04095 PF01202 Shikimate kinase GER12_RS04100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GER12_RS04105 PF03807 NADP oxidoreductase coenzyme F420-dependent GER12_RS04105 PF14748 Pyrroline-5-carboxylate reductase dimerisation GER12_RS04110 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS04110 PF05230 MASE2 domain GER12_RS04115 PF07769 psiF repeat GER12_RS04120 PF10796 Sigma-S stabilisation anti-adaptor protein GER12_RS04125 PF07690 Major Facilitator Superfamily GER12_RS04135 PF07478 D-ala D-ala ligase C-terminus GER12_RS04135 PF01820 D-ala D-ala ligase N-terminus GER12_RS04140 PF10953 Protein of unknown function (DUF2754) GER12_RS04145 PF10954 Protein of unknown function (DUF2755) GER12_RS04150 PF07759 Protein of unknown function (DUF1615) GER12_RS04155 PF05992 SbmA/BacA-like family GER12_RS04160 PF00144 Beta-lactamase GER12_RS04165 PF15977 Winged helix-turn-helix DNA binding GER12_RS04170 PF03797 Autotransporter beta-domain GER12_RS04175 PF00490 Delta-aminolevulinic acid dehydratase GER12_RS04180 PF16177 Acetyl-coenzyme A synthetase N-terminus GER12_RS04180 PF00501 AMP-binding enzyme GER12_RS04180 PF13193 AMP-binding enzyme C-terminal domain GER12_RS04185 PF03972 MmgE/PrpD family GER12_RS04190 PF00285 Citrate synthase, C-terminal domain GER12_RS04200 PF02954 Bacterial regulatory protein, Fis family GER12_RS04200 PF00158 Sigma-54 interaction domain GER12_RS04200 PF06506 Propionate catabolism activator GER12_RS04205 PF07338 Protein of unknown function (DUF1471) GER12_RS04210 PF01810 LysE type translocator GER12_RS04215 PF07715 TonB-dependent Receptor Plug Domain GER12_RS04215 PF00593 TonB dependent receptor GER12_RS04230 PF02322 Cytochrome bd terminal oxidase subunit II GER12_RS04235 PF01654 Cytochrome bd terminal oxidase subunit I GER12_RS04245 PF08774 VRR-NUC domain GER12_RS04245 PF04851 Type III restriction enzyme, res subunit GER12_RS04250 PF01555 DNA methylase GER12_RS04250 PF18273 Type III R-M EcoP15I C-terminal domain GER12_RS04255 PF07690 Major Facilitator Superfamily GER12_RS04265 PF09278 MerR, DNA binding GER12_RS04265 PF00376 MerR family regulatory protein GER12_RS04270 PF00403 Heavy-metal-associated domain GER12_RS04275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS04280 PF00873 AcrB/AcrD/AcrF family GER12_RS04285 PF02321 Outer membrane efflux protein GER12_RS04305 PF13505 Outer membrane protein beta-barrel domain GER12_RS04320 PF12792 CSS motif domain associated with EAL GER12_RS04320 PF00563 EAL domain GER12_RS04335 PF16970 Type-1 fimbrial protein, A GER12_RS04340 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS04340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS04345 PF13953 PapC C-terminal domain GER12_RS04345 PF13954 PapC N-terminal domain GER12_RS04345 PF00577 Outer membrane usher protein GER12_RS04355 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS04355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS04370 PF03466 LysR substrate binding domain GER12_RS04375 PF00561 alpha/beta hydrolase fold GER12_RS04380 PF01557 Fumarylacetoacetate (FAA) hydrolase family GER12_RS04385 PF00694 Aconitase C-terminal domain GER12_RS04390 PF00330 Aconitase family (aconitate hydratase) GER12_RS04395 PF07690 Major Facilitator Superfamily GER12_RS04400 PF08986 Domain of unknown function (DUF1889) GER12_RS04405 PF18427 DD-reactivating factor swiveling domain GER12_RS04405 PF08841 Diol dehydratase reactivase ATPase-like domain GER12_RS04410 PF18427 DD-reactivating factor swiveling domain GER12_RS04410 PF08841 Diol dehydratase reactivase ATPase-like domain GER12_RS04420 PF13356 Arm DNA-binding domain GER12_RS04420 PF00589 Phage integrase family GER12_RS04430 PF00171 Aldehyde dehydrogenase family GER12_RS04435 PF01472 PUA domain GER12_RS04435 PF00696 Amino acid kinase family GER12_RS04440 PF00267 Gram-negative porin GER12_RS04445 PF07417 Sigma factor-binding transcriptional regulator Crl GER12_RS04450 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) GER12_RS04455 PF00156 Phosphoribosyl transferase domain GER12_RS04460 PF07687 Peptidase dimerisation domain GER12_RS04460 PF01546 Peptidase family M20/M25/M40 GER12_RS04465 PF00472 RF-1 domain GER12_RS04475 PF11798 IMS family HHH motif GER12_RS04475 PF11799 impB/mucB/samB family C-terminal domain GER12_RS04475 PF00817 impB/mucB/samB family GER12_RS04480 PF03734 L,D-transpeptidase catalytic domain GER12_RS04485 PF13230 Glutamine amidotransferases class-II GER12_RS04490 PF13580 SIS domain GER12_RS04495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GER12_RS04495 PF02770 Acyl-CoA dehydrogenase, middle domain GER12_RS04495 PF09317 Domain of unknown function (DUF1974) GER12_RS04495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GER12_RS04500 PF00795 Carbon-nitrogen hydrolase GER12_RS04510 PF13505 Outer membrane protein beta-barrel domain GER12_RS04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS04520 PF03466 LysR substrate binding domain GER12_RS04540 PF00577 Outer membrane usher protein GER12_RS04540 PF13953 PapC C-terminal domain GER12_RS04540 PF13954 PapC N-terminal domain GER12_RS04545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS04545 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS04605 PF03527 RHS protein GER12_RS04605 PF05593 RHS Repeat GER12_RS04615 PF04717 Type VI secretion system, phage-baseplate injector GER12_RS04615 PF16671 Actin cross-linking domain GER12_RS04650 PF04972 BON domain GER12_RS04650 PF00691 OmpA family GER12_RS04705 PF10431 C-terminal, D2-small domain, of ClpB protein GER12_RS04705 PF17871 AAA lid domain GER12_RS04705 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS04705 PF07724 AAA domain (Cdc48 subfamily) GER12_RS04745 PF00929 Exonuclease GER12_RS04750 PF00075 RNase H GER12_RS04755 PF08241 Methyltransferase domain GER12_RS04760 PF00753 Metallo-beta-lactamase superfamily GER12_RS04760 PF16123 Hydroxyacylglutathione hydrolase C-terminus GER12_RS04765 PF01476 LysM domain GER12_RS04765 PF01464 Transglycosylase SLT domain GER12_RS04770 PF08241 Methyltransferase domain GER12_RS04775 PF03372 Endonuclease/Exonuclease/phosphatase family GER12_RS04780 PF07690 Major Facilitator Superfamily GER12_RS04785 PF03466 LysR substrate binding domain GER12_RS04785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS04790 PF00248 Aldo/keto reductase family GER12_RS04830 PF00005 ABC transporter GER12_RS04830 PF09383 NIL domain GER12_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS04840 PF03180 NLPA lipoprotein GER12_RS04845 PF16358 RcsF lipoprotein GER12_RS04850 PF01980 tRNA-methyltransferase O GER12_RS04850 PF18389 TrmO C-terminal domain GER12_RS04855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GER12_RS04855 PF03129 Anticodon binding domain GER12_RS04855 PF04073 Aminoacyl-tRNA editing domain GER12_RS04860 PF17185 NlpE C-terminal OB domain GER12_RS04860 PF04170 NlpE N-terminal domain GER12_RS04865 PF00472 RF-1 domain GER12_RS04870 PF07152 YaeQ protein GER12_RS04875 PF06786 Uncharacterised protein family (UPF0253) GER12_RS04880 PF07073 Modulator of Rho-dependent transcription termination (ROF) GER12_RS04885 PF01171 PP-loop family GER12_RS04885 PF11734 TilS substrate C-terminal domain GER12_RS04885 PF09179 TilS substrate binding domain GER12_RS04890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GER12_RS04900 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GER12_RS04900 PF18416 N-acetylglucosamine binding protein domain 2 GER12_RS04905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GER12_RS04910 PF07733 Bacterial DNA polymerase III alpha NTPase domain GER12_RS04910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GER12_RS04910 PF14579 Helix-hairpin-helix motif GER12_RS04910 PF01336 OB-fold nucleic acid binding domain GER12_RS04910 PF02811 PHP domain GER12_RS04915 PF01351 Ribonuclease HII GER12_RS04920 PF02684 Lipid-A-disaccharide synthetase GER12_RS04925 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS04925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GER12_RS04930 PF07977 FabA-like domain GER12_RS04935 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS04935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GER12_RS04940 PF03938 Outer membrane protein (OmpH-like) GER12_RS04945 PF01103 Surface antigen GER12_RS04945 PF07244 Surface antigen variable number repeat GER12_RS04950 PF17820 PDZ domain GER12_RS04950 PF02163 Peptidase family M50 GER12_RS04960 PF01255 Putative undecaprenyl diphosphate synthase GER12_RS04965 PF13288 DXP reductoisomerase C-terminal domain GER12_RS04965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GER12_RS04965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GER12_RS04970 PF01765 Ribosome recycling factor GER12_RS04975 PF00696 Amino acid kinase family GER12_RS04980 PF00889 Elongation factor TS GER12_RS04985 PF00318 Ribosomal protein S2 GER12_RS04990 PF00557 Metallopeptidase family M24 GER12_RS04995 PF01909 Nucleotidyltransferase domain GER12_RS04995 PF01966 HD domain GER12_RS04995 PF01842 ACT domain GER12_RS04995 PF08335 GlnD PII-uridylyltransferase GER12_RS05000 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS05000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GER12_RS05000 PF14602 Hexapeptide repeat of succinyl-transferase GER12_RS05005 PF00083 Sugar (and other) transporter GER12_RS05005 PF07690 Major Facilitator Superfamily GER12_RS05010 PF11944 Protein of unknown function (DUF3461) GER12_RS05015 PF13556 PucR C-terminal helix-turn-helix domain GER12_RS05015 PF05651 Putative sugar diacid recognition GER12_RS05015 PF17853 GGDEF-like domain GER12_RS05020 PF00595 PDZ domain GER12_RS05025 PF13286 Phosphohydrolase-associated domain GER12_RS05025 PF01966 HD domain GER12_RS05030 PF01048 Phosphorylase superfamily GER12_RS05035 PF01497 Periplasmic binding protein GER12_RS05040 PF03458 UPF0126 domain GER12_RS05045 PF01521 Iron-sulphur cluster biosynthesis GER12_RS05050 PF00654 Voltage gated chloride channel GER12_RS05055 PF00202 Aminotransferase class-III GER12_RS05060 PF11245 Protein of unknown function (DUF2544) GER12_RS05065 PF00419 Fimbrial protein GER12_RS05070 PF00419 Fimbrial protein GER12_RS05075 PF00419 Fimbrial protein GER12_RS05080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS05080 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS05085 PF13953 PapC C-terminal domain GER12_RS05085 PF00577 Outer membrane usher protein GER12_RS05085 PF13954 PapC N-terminal domain GER12_RS05095 PF01032 FecCD transport family GER12_RS05100 PF01497 Periplasmic binding protein GER12_RS05105 PF00005 ABC transporter GER12_RS05110 PF00593 TonB dependent receptor GER12_RS05110 PF07715 TonB-dependent Receptor Plug Domain GER12_RS05115 PF14814 Bifunctional transglycosylase second domain GER12_RS05115 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal GER12_RS05115 PF00912 Transglycosylase GER12_RS05115 PF00905 Penicillin binding protein transpeptidase domain GER12_RS05120 PF08482 ATP-dependent helicase C-terminal GER12_RS05120 PF00270 DEAD/DEAH box helicase GER12_RS05120 PF04408 Helicase associated domain (HA2) GER12_RS05120 PF00271 Helicase conserved C-terminal domain GER12_RS05125 PF02834 LigT like Phosphoesterase GER12_RS05130 PF03749 Sugar fermentation stimulation protein RE domain GER12_RS05130 PF17746 SfsA N-terminal OB domain GER12_RS05135 PF01258 Prokaryotic dksA/traR C4-type zinc finger GER12_RS05140 PF00749 tRNA synthetases class I (E and Q), catalytic domain GER12_RS05145 PF01743 Poly A polymerase head domain GER12_RS05145 PF12626 Polymerase A arginine-rich C-terminus GER12_RS05145 PF12627 Probable RNA and SrmB- binding site of polymerase A GER12_RS05150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GER12_RS05155 PF02548 Ketopantoate hydroxymethyltransferase GER12_RS05160 PF02569 Pantoate-beta-alanine ligase GER12_RS05165 PF02261 Aspartate decarboxylase GER12_RS05170 PF01522 Polysaccharide deacetylase GER12_RS05175 PF03610 PTS system fructose IIA component GER12_RS05185 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS05185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS05190 PF00577 Outer membrane usher protein GER12_RS05190 PF13953 PapC C-terminal domain GER12_RS05190 PF13954 PapC N-terminal domain GER12_RS05195 PF00419 Fimbrial protein GER12_RS05200 PF01061 ABC-2 type transporter GER12_RS05205 PF00005 ABC transporter GER12_RS05210 PF00484 Carbonic anhydrase GER12_RS05215 PF00156 Phosphoribosyl transferase domain GER12_RS05220 PF01011 PQQ enzyme repeat GER12_RS05225 PF07732 Multicopper oxidase GER12_RS05225 PF07731 Multicopper oxidase GER12_RS05225 PF00394 Multicopper oxidase GER12_RS05230 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) GER12_RS05235 PF17284 Spermidine synthase tetramerisation domain GER12_RS05240 PF02675 S-adenosylmethionine decarboxylase GER12_RS05245 PF00455 DeoR C terminal sensor domain GER12_RS05245 PF08220 DeoR-like helix-turn-helix domain GER12_RS05250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GER12_RS05255 PF17042 Nucleotide-binding C-terminal domain GER12_RS05255 PF07005 Sugar-binding N-terminal domain GER12_RS05260 PF03812 2-keto-3-deoxygluconate permease GER12_RS05265 PF06062 Uncharacterised protein family (UPF0231) GER12_RS05280 PF11791 Aconitate B N-terminal domain GER12_RS05280 PF00330 Aconitase family (aconitate hydratase) GER12_RS05280 PF06434 Aconitate hydratase 2 N-terminus GER12_RS05285 PF11737 Protein of unknown function (DUF3300) GER12_RS05300 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS05300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GER12_RS05305 PF00364 Biotin-requiring enzyme GER12_RS05305 PF02817 e3 binding domain GER12_RS05305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GER12_RS05310 PF17831 Pyruvate dehydrogenase E1 component middle domain GER12_RS05310 PF00456 Transketolase, thiamine diphosphate binding domain GER12_RS05315 PF07729 FCD domain GER12_RS05315 PF00392 Bacterial regulatory proteins, gntR family GER12_RS05320 PF00324 Amino acid permease GER12_RS05330 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain GER12_RS05330 PF04616 Glycosyl hydrolases family 43 GER12_RS05335 PF17113 Regulatory signalling modulator protein AmpE GER12_RS05340 PF01510 N-acetylmuramoyl-L-alanine amidase GER12_RS05345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GER12_RS05345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GER12_RS05350 PF07963 Prokaryotic N-terminal methylation motif GER12_RS05355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GER12_RS05355 PF00437 Type II/IV secretion system protein GER12_RS05360 PF00482 Type II secretion system (T2SS), protein F GER12_RS05365 PF00478 IMP dehydrogenase / GMP reductase domain GER12_RS05370 PF01121 Dephospho-CoA kinase GER12_RS05375 PF07072 Cell division protein GER12_RS05380 PF03884 DNA gyrase inhibitor YacG GER12_RS05390 PF00293 NUDIX domain GER12_RS05395 PF07516 SecA Wing and Scaffold domain GER12_RS05395 PF01043 SecA preprotein cross-linking domain GER12_RS05395 PF07517 SecA DEAD-like domain GER12_RS05395 PF02810 SEC-C motif GER12_RS05400 PF06558 Secretion monitor precursor protein (SecM) GER12_RS05405 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GER12_RS05410 PF00091 Tubulin/FtsZ family, GTPase domain GER12_RS05410 PF12327 FtsZ family, C-terminal domain GER12_RS05415 PF02491 SHS2 domain inserted in FTSA GER12_RS05420 PF03799 Cell division protein FtsQ GER12_RS05420 PF08478 POTRA domain, FtsQ-type GER12_RS05425 PF07478 D-ala D-ala ligase C-terminus GER12_RS05425 PF01820 D-ala D-ala ligase N-terminus GER12_RS05430 PF01225 Mur ligase family, catalytic domain GER12_RS05430 PF02875 Mur ligase family, glutamate ligase domain GER12_RS05430 PF08245 Mur ligase middle domain GER12_RS05435 PF03033 Glycosyltransferase family 28 N-terminal domain GER12_RS05435 PF04101 Glycosyltransferase family 28 C-terminal domain GER12_RS05440 PF01098 Cell cycle protein GER12_RS05445 PF02875 Mur ligase family, glutamate ligase domain GER12_RS05445 PF08245 Mur ligase middle domain GER12_RS05450 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GER12_RS05450 PF00953 Glycosyl transferase family 4 GER12_RS05455 PF08245 Mur ligase middle domain GER12_RS05455 PF01225 Mur ligase family, catalytic domain GER12_RS05455 PF02875 Mur ligase family, glutamate ligase domain GER12_RS05460 PF01225 Mur ligase family, catalytic domain GER12_RS05460 PF02875 Mur ligase family, glutamate ligase domain GER12_RS05460 PF08245 Mur ligase middle domain GER12_RS05465 PF03717 Penicillin-binding Protein dimerisation domain GER12_RS05465 PF00905 Penicillin binding protein transpeptidase domain GER12_RS05470 PF04999 Cell division protein FtsL GER12_RS05475 PF01795 MraW methylase family GER12_RS05480 PF02381 MraZ protein, putative antitoxin-like GER12_RS05485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GER12_RS05485 PF00356 Bacterial regulatory proteins, lacI family GER12_RS05490 PF10369 Small subunit of acetolactate synthase GER12_RS05495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS05495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS05495 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS05500 PF03466 LysR substrate binding domain GER12_RS05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS05505 PF08054 Leucine operon leader peptide GER12_RS05510 PF08502 LeuA allosteric (dimerisation) domain GER12_RS05510 PF00682 HMGL-like GER12_RS05515 PF00180 Isocitrate/isopropylmalate dehydrogenase GER12_RS05520 PF00330 Aconitase family (aconitate hydratase) GER12_RS05525 PF00694 Aconitase C-terminal domain GER12_RS05540 PF12793 Sugar transport-related sRNA regulator N-term GER12_RS05540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS05555 PF00005 ABC transporter GER12_RS05560 PF09335 SNARE associated Golgi protein GER12_RS05565 PF12833 Helix-turn-helix domain GER12_RS05565 PF02311 AraC-like ligand binding domain GER12_RS05570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS05575 PF11762 L-arabinose isomerase C-terminal domain GER12_RS05575 PF02610 L-arabinose isomerase GER12_RS05580 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS05600 PF03104 DNA polymerase family B, exonuclease domain GER12_RS05600 PF00136 DNA polymerase family B GER12_RS05605 PF00176 SNF2 family N-terminal domain GER12_RS05605 PF18337 RapA N-terminal Tudor like domain GER12_RS05605 PF18339 RapA N-terminal Tudor like domain 1 GER12_RS05605 PF12137 RNA polymerase recycling family C-terminal GER12_RS05605 PF00271 Helicase conserved C-terminal domain GER12_RS05610 PF00849 RNA pseudouridylate synthase GER12_RS05615 PF00226 DnaJ domain GER12_RS05615 PF05099 Tellurite resistance protein TerB GER12_RS05620 PF04453 LPS transport system D GER12_RS05620 PF03968 OstA-like protein GER12_RS05625 PF00639 PPIC-type PPIASE domain GER12_RS05625 PF09312 SurA N-terminal domain GER12_RS05630 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GER12_RS05635 PF00398 Ribosomal RNA adenine dimethylase GER12_RS05640 PF04379 ApaG domain GER12_RS05645 PF00149 Calcineurin-like phosphoesterase GER12_RS05650 PF00186 Dihydrofolate reductase GER12_RS05655 PF00999 Sodium/hydrogen exchanger family GER12_RS05655 PF02254 TrkA-N domain GER12_RS05660 PF02525 Flavodoxin-like fold GER12_RS05665 PF00884 Sulfatase GER12_RS05680 PF06004 Bacterial protein of unknown function (DUF903) GER12_RS05685 PF00083 Sugar (and other) transporter GER12_RS05695 PF01494 FAD binding domain GER12_RS05700 PF01012 Electron transfer flavoprotein domain GER12_RS05700 PF00766 Electron transfer flavoprotein FAD-binding domain GER12_RS05705 PF01012 Electron transfer flavoprotein domain GER12_RS05710 PF02028 BCCT, betaine/carnitine/choline family transporter GER12_RS05715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GER12_RS05715 PF02770 Acyl-CoA dehydrogenase, middle domain GER12_RS05715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GER12_RS05720 PF02515 CoA-transferase family III GER12_RS05725 PF13193 AMP-binding enzyme C-terminal domain GER12_RS05725 PF00501 AMP-binding enzyme GER12_RS05730 PF00378 Enoyl-CoA hydratase/isomerase GER12_RS05735 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS05740 PF07180 CaiF/GrlA transcriptional regulator GER12_RS05745 PF02142 MGS-like domain GER12_RS05745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GER12_RS05745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GER12_RS05750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GER12_RS05750 PF00117 Glutamine amidotransferase class-I GER12_RS05760 PF05173 Dihydrodipicolinate reductase, C-terminus GER12_RS05760 PF01113 Dihydrodipicolinate reductase, N-terminus GER12_RS05765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GER12_RS05770 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GER12_RS05775 PF04223 Citrate lyase, alpha subunit (CitF) GER12_RS05780 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS05785 PF06857 Malonate decarboxylase delta subunit (MdcD) GER12_RS05790 PF00583 Acetyltransferase (GNAT) family GER12_RS05790 PF08218 Citrate lyase ligase C-terminal domain GER12_RS05795 PF03390 2-hydroxycarboxylate transporter family GER12_RS05800 PF04277 Oxaloacetate decarboxylase, gamma chain GER12_RS05805 PF02436 Conserved carboxylase domain GER12_RS05805 PF00364 Biotin-requiring enzyme GER12_RS05805 PF00682 HMGL-like GER12_RS05810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GER12_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS05815 PF17203 Single cache domain 3 GER12_RS05820 PF00072 Response regulator receiver domain GER12_RS05820 PF12431 Transcriptional regulator GER12_RS05825 PF01156 Inosine-uridine preferring nucleoside hydrolase GER12_RS05835 PF02401 LytB protein GER12_RS05840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GER12_RS05845 PF01252 Signal peptidase (SPase) II GER12_RS05850 PF08264 Anticodon-binding domain of tRNA GER12_RS05850 PF06827 Zinc finger found in FPG and IleRS GER12_RS05850 PF00133 tRNA synthetases class I (I, L, M and V) GER12_RS05855 PF06574 FAD synthetase GER12_RS05855 PF01687 Riboflavin kinase GER12_RS05860 PF10837 Protein of unknown function (DUF2575) GER12_RS05865 PF01649 Ribosomal protein S20 GER12_RS05875 PF01055 Glycosyl hydrolases family 31 GER12_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS05880 PF03466 LysR substrate binding domain GER12_RS05885 PF06965 Na+/H+ antiporter 1 GER12_RS05900 PF13186 Iron-sulfur cluster-binding domain GER12_RS05900 PF04055 Radical SAM superfamily GER12_RS05905 PF16385 Domain of unknown function GER12_RS05905 PF00884 Sulfatase GER12_RS05915 PF02872 5'-nucleotidase, C-terminal domain GER12_RS05915 PF00149 Calcineurin-like phosphoesterase GER12_RS05930 PF03466 LysR substrate binding domain GER12_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS05950 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS05950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS05955 PF16970 Type-1 fimbrial protein, A GER12_RS05960 PF00419 Fimbrial protein GER12_RS05965 PF00419 Fimbrial protein GER12_RS05975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS05975 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS05980 PF00419 Fimbrial protein GER12_RS05995 PF00704 Glycosyl hydrolases family 18 GER12_RS06015 PF03466 LysR substrate binding domain GER12_RS06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS06020 PF00684 DnaJ central domain GER12_RS06020 PF01556 DnaJ C terminal domain GER12_RS06020 PF00226 DnaJ domain GER12_RS06025 PF00012 Hsp70 protein GER12_RS06030 PF10807 Protein of unknown function (DUF2541) GER12_RS06035 PF13099 Domain of unknown function (DUF3944) GER12_RS06035 PF03981 Ubiquinol-cytochrome C chaperone GER12_RS06040 PF01184 GPR1/FUN34/yaaH family GER12_RS06045 PF00994 Probable molybdopterin binding domain GER12_RS06050 PF00923 Transaldolase/Fructose-6-phosphate aldolase GER12_RS06055 PF01235 Sodium:alanine symporter family GER12_RS06060 PF03883 Peroxide stress protein YaaA GER12_RS06065 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS06065 PF14821 Threonine synthase N terminus GER12_RS06070 PF00288 GHMP kinases N terminal domain GER12_RS06070 PF08544 GHMP kinases C terminal GER12_RS06075 PF00742 Homoserine dehydrogenase GER12_RS06075 PF00696 Amino acid kinase family GER12_RS06075 PF01842 ACT domain GER12_RS06075 PF13840 ACT domain GER12_RS06075 PF03447 Homoserine dehydrogenase, NAD binding domain GER12_RS06080 PF08254 Threonine leader peptide GER12_RS06085 PF00588 SpoU rRNA Methylase family GER12_RS06095 PF00072 Response regulator receiver domain GER12_RS06095 PF00486 Transcriptional regulatory protein, C terminal GER12_RS06105 PF15977 Winged helix-turn-helix DNA binding GER12_RS06115 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS06115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS06120 PF00577 Outer membrane usher protein GER12_RS06120 PF13954 PapC N-terminal domain GER12_RS06120 PF13953 PapC C-terminal domain GER12_RS06135 PF06123 Inner membrane protein CreD GER12_RS06140 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS06140 PF00672 HAMP domain GER12_RS06145 PF00072 Response regulator receiver domain GER12_RS06145 PF00486 Transcriptional regulatory protein, C terminal GER12_RS06150 PF05981 CreA protein GER12_RS06155 PF06445 GyrI-like small molecule binding domain GER12_RS06155 PF12833 Helix-turn-helix domain GER12_RS06160 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS06165 PF01931 Protein of unknown function DUF84 GER12_RS06170 PF01371 Trp repressor protein GER12_RS06175 PF01464 Transglycosylase SLT domain GER12_RS06175 PF14718 Soluble lytic murein transglycosylase L domain GER12_RS06180 PF00005 ABC transporter GER12_RS06180 PF12848 ABC transporter GER12_RS06185 PF13521 AAA domain GER12_RS06185 PF01381 Helix-turn-helix GER12_RS06190 PF18073 Rubredoxin metal binding domain GER12_RS06195 PF18429 Domain of unknown function (DUF5609) GER12_RS06200 PF10144 Bacterial virulence factor haemolysin GER12_RS06205 PF03099 Biotin/lipoate A/B protein ligase family GER12_RS06205 PF10437 Bacterial lipoate protein ligase C-terminus GER12_RS06215 PF06551 Protein of unknown function (DUF1120) GER12_RS06220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS06225 PF13954 PapC N-terminal domain GER12_RS06225 PF13953 PapC C-terminal domain GER12_RS06225 PF00577 Outer membrane usher protein GER12_RS06235 PF01048 Phosphorylase superfamily GER12_RS06240 PF01676 Metalloenzyme superfamily GER12_RS06245 PF00591 Glycosyl transferase family, a/b domain GER12_RS06245 PF02885 Glycosyl transferase family, helical bundle domain GER12_RS06245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GER12_RS06250 PF01791 DeoC/LacD family aldolase GER12_RS06255 PF11230 Protein of unknown function (DUF3029) GER12_RS06260 PF04055 Radical SAM superfamily GER12_RS06265 PF01026 TatD related DNase GER12_RS06270 PF01734 Patatin-like phospholipase GER12_RS06275 PF07043 Protein of unknown function (DUF1328) GER12_RS06280 PF04972 BON domain GER12_RS06285 PF16658 Class II release factor RF3, C-terminal domain GER12_RS06285 PF03144 Elongation factor Tu domain 2 GER12_RS06285 PF00009 Elongation factor Tu GTP binding domain GER12_RS06290 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS06295 PF00583 Acetyltransferase (GNAT) family GER12_RS06300 PF03603 DNA polymerase III psi subunit GER12_RS06305 PF08468 Methyltransferase small domain N-terminal GER12_RS06305 PF05175 Methyltransferase small domain GER12_RS06325 PF07256 Protein of unknown function (DUF1435) GER12_RS06330 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS06330 PF05230 MASE2 domain GER12_RS06335 PF06276 Ferric iron reductase FhuF-like transporter GER12_RS06335 PF11575 FhuF 2Fe-2S C-terminal domain GER12_RS06340 PF04073 Aminoacyl-tRNA editing domain GER12_RS06345 PF00196 Bacterial regulatory proteins, luxR family GER12_RS06350 PF00196 Bacterial regulatory proteins, luxR family GER12_RS06355 PF06738 Putative threonine/serine exporter GER12_RS06360 PF12821 Threonine/Serine exporter, ThrE GER12_RS06365 PF17948 DnaT DNA-binding domain GER12_RS06370 PF01695 IstB-like ATP binding protein GER12_RS06375 PF10696 Protein of unknown function (DUF2501) GER12_RS06380 PF00884 Sulfatase GER12_RS06385 PF01380 SIS domain GER12_RS06390 PF01380 SIS domain GER12_RS06395 PF03613 PTS system mannose/fructose/sorbose family IID component GER12_RS06400 PF03609 PTS system sorbose-specific iic component GER12_RS06405 PF03830 PTS system sorbose subfamily IIB component GER12_RS06415 PF00874 PRD domain GER12_RS06415 PF00158 Sigma-54 interaction domain GER12_RS06420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS06420 PF00672 HAMP domain GER12_RS06420 PF02203 Tar ligand binding domain homologue GER12_RS06425 PF02554 Carbon starvation protein CstA GER12_RS06425 PF13722 5TM C-terminal transporter carbon starvation CstA GER12_RS06430 PF04328 Selenoprotein, putative GER12_RS06435 PF07683 Cobalamin synthesis protein cobW C-terminal domain GER12_RS06435 PF02492 CobW/HypB/UreG, nucleotide-binding domain GER12_RS06450 PF04471 Restriction endonuclease GER12_RS06450 PF14338 Mrr N-terminal domain GER12_RS06455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GER12_RS06455 PF00271 Helicase conserved C-terminal domain GER12_RS06455 PF08463 EcoEI R protein C-terminal GER12_RS06455 PF04851 Type III restriction enzyme, res subunit GER12_RS06460 PF02384 N-6 DNA Methylase GER12_RS06465 PF01420 Type I restriction modification DNA specificity domain GER12_RS06470 PF08845 Toxin SymE, type I toxin-antitoxin system GER12_RS06490 PF00171 Aldehyde dehydrogenase family GER12_RS06495 PF04754 Putative transposase, YhgA-like GER12_RS06500 PF07690 Major Facilitator Superfamily GER12_RS06505 PF04286 Protein of unknown function (DUF445) GER12_RS06510 PF06779 Uncharacterised MFS-type transporter YbfB GER12_RS06515 PF07670 Nucleoside recognition GER12_RS06520 PF07670 Nucleoside recognition GER12_RS06525 PF01979 Amidohydrolase family GER12_RS06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS06530 PF03466 LysR substrate binding domain GER12_RS06535 PF01177 Asp/Glu/Hydantoin racemase GER12_RS06545 PF00579 tRNA synthetases class I (W and Y) GER12_RS06550 PF07729 FCD domain GER12_RS06550 PF00392 Bacterial regulatory proteins, gntR family GER12_RS06555 PF01738 Dienelactone hydrolase family GER12_RS06560 PF03625 Domain of unknown function DUF302 GER12_RS06560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GER12_RS06580 PF09857 Putative toxin of bacterial toxin-antitoxin pair GER12_RS06585 PF13847 Methyltransferase domain GER12_RS06590 PF01709 Transcriptional regulator GER12_RS06600 PF00580 UvrD/REP helicase N-terminal domain GER12_RS06600 PF12462 DNA helicase IV / RNA helicase N terminal GER12_RS06600 PF13361 UvrD-like helicase C-terminal domain GER12_RS06620 PF01471 Putative peptidoglycan binding domain GER12_RS06620 PF10128 Glucose-6-phosphate dehydrogenase subunit GER12_RS06720 PF13356 Arm DNA-binding domain GER12_RS06720 PF00589 Phage integrase family GER12_RS06730 PF00107 Zinc-binding dehydrogenase GER12_RS06730 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS06735 PF01202 Shikimate kinase GER12_RS06740 PF00107 Zinc-binding dehydrogenase GER12_RS06740 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS06745 PF00106 short chain dehydrogenase GER12_RS06750 PF02447 GntP family permease GER12_RS06755 PF00356 Bacterial regulatory proteins, lacI family GER12_RS06760 PF03739 Lipopolysaccharide export system permease LptF/LptG GER12_RS06765 PF03739 Lipopolysaccharide export system permease LptF/LptG GER12_RS06770 PF00883 Cytosol aminopeptidase family, catalytic domain GER12_RS06770 PF02789 Cytosol aminopeptidase family, N-terminal domain GER12_RS06775 PF04364 DNA polymerase III chi subunit, HolC GER12_RS06780 PF08264 Anticodon-binding domain of tRNA GER12_RS06780 PF10458 Valyl tRNA synthetase tRNA binding arm GER12_RS06780 PF00133 tRNA synthetases class I (I, L, M and V) GER12_RS06785 PF05987 Bacterial protein of unknown function (DUF898) GER12_RS06790 PF00583 Acetyltransferase (GNAT) family GER12_RS06795 PF12276 Protein of unknown function (DUF3617) GER12_RS06800 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GER12_RS06805 PF06877 Regulator of ribonuclease activity B GER12_RS06810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GER12_RS06810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GER12_RS06815 PF04074 YhcH/YjgK/YiaL GER12_RS06825 PF00696 Amino acid kinase family GER12_RS06830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GER12_RS06830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GER12_RS06835 PF03606 C4-dicarboxylate anaerobic carrier GER12_RS06840 PF01316 Arginine repressor, DNA binding domain GER12_RS06840 PF02863 Arginine repressor, C-terminal domain GER12_RS06850 PF08052 PyrBI operon leader peptide GER12_RS06855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GER12_RS06855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GER12_RS06860 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GER12_RS06860 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GER12_RS06865 PF01042 Endoribonuclease L-PSP GER12_RS06875 PF00689 Cation transporting ATPase, C-terminus GER12_RS06875 PF00690 Cation transporter/ATPase, N-terminus GER12_RS06880 PF17059 MgtA leader peptide GER12_RS06885 PF00356 Bacterial regulatory proteins, lacI family GER12_RS06890 PF02378 Phosphotransferase system, EIIC GER12_RS06890 PF00367 phosphotransferase system, EIIB GER12_RS06895 PF11941 Domain of unknown function (DUF3459) GER12_RS06895 PF00128 Alpha amylase, catalytic domain GER12_RS06900 PF13597 Anaerobic ribonucleoside-triphosphate reductase GER12_RS06900 PF03477 ATP cone domain GER12_RS06910 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GER12_RS06915 PF04221 RelB antitoxin GER12_RS06920 PF00874 PRD domain GER12_RS06920 PF05043 Mga helix-turn-helix domain GER12_RS06920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS06920 PF08279 HTH domain GER12_RS06925 PF07071 KDGP aldolase GER12_RS06930 PF03841 L-seryl-tRNA selenium transferase GER12_RS06935 PF01979 Amidohydrolase family GER12_RS06965 PF07361 Cytochrome b562 GER12_RS06970 PF01523 Putative modulator of DNA gyrase GER12_RS06975 PF04751 Protein of unknown function (DUF615) GER12_RS06980 PF08245 Mur ligase middle domain GER12_RS06980 PF01225 Mur ligase family, catalytic domain GER12_RS06980 PF02875 Mur ligase family, glutamate ligase domain GER12_RS06985 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GER12_RS06990 PF00719 Inorganic pyrophosphatase GER12_RS06995 PF01979 Amidohydrolase family GER12_RS07000 PF07690 Major Facilitator Superfamily GER12_RS07005 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GER12_RS07010 PF04357 TamB, inner membrane protein subunit of TAM complex GER12_RS07015 PF17243 POTRA domain TamA domain 1 GER12_RS07015 PF07244 Surface antigen variable number repeat GER12_RS07015 PF01103 Surface antigen GER12_RS07020 PF01625 Peptide methionine sulfoxide reductase GER12_RS07025 PF00571 CBS domain GER12_RS07025 PF03471 Transporter associated domain GER12_RS07025 PF01595 Cyclin M transmembrane N-terminal domain GER12_RS07030 PF06526 Protein of unknown function (DUF1107) GER12_RS07035 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GER12_RS07040 PF00459 Inositol monophosphatase family GER12_RS07045 PF02872 5'-nucleotidase, C-terminal domain GER12_RS07045 PF00149 Calcineurin-like phosphoesterase GER12_RS07050 PF01638 HxlR-like helix-turn-helix GER12_RS07055 PF05368 NmrA-like family GER12_RS07060 PF00892 EamA-like transporter family GER12_RS07065 PF04405 Domain of Unknown function (DUF542) GER12_RS07065 PF01814 Hemerythrin HHE cation binding domain GER12_RS07070 PF00324 Amino acid permease GER12_RS07075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GER12_RS07075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GER12_RS07080 PF08525 Opacity-associated protein A N-terminal motif GER12_RS07080 PF04225 Opacity-associated protein A LysM-like domain GER12_RS07090 PF01281 Ribosomal protein L9, N-terminal domain GER12_RS07090 PF03948 Ribosomal protein L9, C-terminal domain GER12_RS07095 PF01084 Ribosomal protein S18 GER12_RS07100 PF00436 Single-strand binding protein family GER12_RS07105 PF01250 Ribosomal protein S6 GER12_RS07115 PF07338 Protein of unknown function (DUF1471) GER12_RS07120 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS07125 PF01261 Xylose isomerase-like TIM barrel GER12_RS07130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GER12_RS07135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS07140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS07145 PF03611 PTS system sugar-specific permease component GER12_RS07155 PF00455 DeoR C terminal sensor domain GER12_RS07155 PF08220 DeoR-like helix-turn-helix domain GER12_RS07160 PF00326 Prolyl oligopeptidase family GER12_RS07165 PF07338 Protein of unknown function (DUF1471) GER12_RS07170 PF07338 Protein of unknown function (DUF1471) GER12_RS07175 PF02770 Acyl-CoA dehydrogenase, middle domain GER12_RS07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GER12_RS07175 PF18158 Adaptive response protein AidB N-terminal domain GER12_RS07180 PF03738 Glutathionylspermidine synthase preATP-grasp GER12_RS07185 PF06693 Protein of unknown function (DUF1190) GER12_RS07190 PF03994 Domain of Unknown Function (DUF350) GER12_RS07195 PF10679 Protein of unknown function (DUF2491) GER12_RS07205 PF04012 PspA/IM30 family GER12_RS07210 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) GER12_RS07215 PF00588 SpoU rRNA Methylase family GER12_RS07215 PF08032 RNA 2'-O ribose methyltransferase substrate binding GER12_RS07220 PF17876 Cold shock domain GER12_RS07220 PF08461 Ribonuclease R winged-helix domain GER12_RS07220 PF08206 Ribonuclease B OB domain GER12_RS07220 PF00773 RNB domain GER12_RS07220 PF00575 S1 RNA binding domain GER12_RS07225 PF02082 Transcriptional regulator GER12_RS07230 PF00709 Adenylosuccinate synthetase GER12_RS07235 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GER12_RS07240 PF01145 SPFH domain / Band 7 family GER12_RS07245 PF12221 Bacterial membrane protein N terminal GER12_RS07245 PF01145 SPFH domain / Band 7 family GER12_RS07250 PF16360 GTP-binding GTPase Middle Region GER12_RS07250 PF01926 50S ribosome-binding GTPase GER12_RS07250 PF13167 GTP-binding GTPase N-terminal GER12_RS07255 PF17209 Hfq protein GER12_RS07265 PF01119 DNA mismatch repair protein, C-terminal domain GER12_RS07265 PF08676 MutL C terminal dimerisation domain GER12_RS07270 PF01520 N-acetylmuramoyl-L-alanine amidase GER12_RS07275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GER12_RS07280 PF01256 Carbohydrate kinase GER12_RS07280 PF03853 YjeF-related protein N-terminus GER12_RS07285 PF08331 Domain of unknown function (DUF1730) GER12_RS07305 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS07310 PF00929 Exonuclease GER12_RS07315 PF03193 RsgA GTPase GER12_RS07320 PF02666 Phosphatidylserine decarboxylase GER12_RS07325 PF12795 Mechanosensitive ion channel porin domain GER12_RS07325 PF00924 Mechanosensitive ion channel GER12_RS07325 PF12794 Mechanosensitive ion channel inner membrane domain 1 GER12_RS07330 PF10840 Protein of unknown function (DUF2645) GER12_RS07335 PF13520 Amino acid permease GER12_RS07340 PF00152 tRNA synthetases class II (D, K and N) GER12_RS07345 PF02910 Fumarate reductase flavoprotein C-term GER12_RS07345 PF00890 FAD binding domain GER12_RS07350 PF13085 2Fe-2S iron-sulfur cluster binding domain GER12_RS07350 PF13183 4Fe-4S dicluster domain GER12_RS07355 PF02300 Fumarate reductase subunit C GER12_RS07360 PF02313 Fumarate reductase subunit D GER12_RS07365 PF08212 Lipocalin-like domain GER12_RS07370 PF00893 Small Multidrug Resistance protein GER12_RS07375 PF00196 Bacterial regulatory proteins, luxR family GER12_RS07380 PF08085 Entericidin EcnA/B family GER12_RS07385 PF08085 Entericidin EcnA/B family GER12_RS07390 PF09285 Elongation factor P, C-terminal GER12_RS07390 PF08207 Elongation factor P (EF-P) KOW-like domain GER12_RS07390 PF01132 Elongation factor P (EF-P) OB domain GER12_RS07395 PF04055 Radical SAM superfamily GER12_RS07400 PF15922 YjeJ-like GER12_RS07405 PF13698 Domain of unknown function (DUF4156) GER12_RS07410 PF00118 TCP-1/cpn60 chaperonin family GER12_RS07415 PF00166 Chaperonin 10 Kd subunit GER12_RS07420 PF13520 Amino acid permease GER12_RS07425 PF04186 FxsA cytoplasmic membrane protein GER12_RS07430 PF10415 Fumarase C C-terminus GER12_RS07430 PF00206 Lyase GER12_RS07435 PF03605 Anaerobic c4-dicarboxylate membrane transporter GER12_RS07440 PF03091 CutA1 divalent ion tolerance protein GER12_RS07445 PF02683 Cytochrome C biogenesis protein transmembrane region GER12_RS07445 PF11412 Disulphide bond corrector protein DsbC GER12_RS07465 PF01569 PAP2 superfamily GER12_RS07470 PF06977 SdiA-regulated GER12_RS07495 PF02432 Fimbrial, major and minor subunit GER12_RS07505 PF17547 Family of unknown function (DUF5462) GER12_RS07510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS07515 PF13954 PapC N-terminal domain GER12_RS07515 PF00577 Outer membrane usher protein GER12_RS07525 PF03333 Adhesin biosynthesis transcription regulatory protein GER12_RS07555 PF12833 Helix-turn-helix domain GER12_RS07560 PF00072 Response regulator receiver domain GER12_RS07560 PF00196 Bacterial regulatory proteins, luxR family GER12_RS07575 PF06977 SdiA-regulated GER12_RS07585 PF02613 Nitrate reductase delta subunit GER12_RS07590 PF04976 DMSO reductase anchor subunit (DmsC) GER12_RS07595 PF13247 4Fe-4S dicluster domain GER12_RS07595 PF12800 4Fe-4S binding domain GER12_RS07600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS07600 PF00384 Molybdopterin oxidoreductase GER12_RS07600 PF01568 Molydopterin dinucleotide binding domain GER12_RS07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS07605 PF00989 PAS fold GER12_RS07605 PF17203 Single cache domain 3 GER12_RS07605 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GER12_RS07610 PF00072 Response regulator receiver domain GER12_RS07620 PF03605 Anaerobic c4-dicarboxylate membrane transporter GER12_RS07625 PF05683 Fumarase C-terminus GER12_RS07625 PF05681 Fumarate hydratase (Fumerase) GER12_RS07635 PF11975 Family 4 glycosyl hydrolase C-terminal domain GER12_RS07635 PF02056 Family 4 glycosyl hydrolase GER12_RS07640 PF12833 Helix-turn-helix domain GER12_RS07645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GER12_RS07645 PF01276 Orn/Lys/Arg decarboxylase, major domain GER12_RS07645 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GER12_RS07650 PF12833 Helix-turn-helix domain GER12_RS07655 PF13520 Amino acid permease GER12_RS07660 PF08019 Phosphoethanolamine transferase EptA/EptB GER12_RS07660 PF00884 Sulfatase GER12_RS07665 PF00486 Transcriptional regulatory protein, C terminal GER12_RS07665 PF00072 Response regulator receiver domain GER12_RS07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS07670 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS07680 PF08946 Osmosensory transporter coiled coil GER12_RS07680 PF00083 Sugar (and other) transporter GER12_RS07685 PF03831 PhnA domain GER12_RS07685 PF08274 PhnA Zinc-Ribbon GER12_RS07690 PF06983 3-demethylubiquinone-9 3-methyltransferase GER12_RS07695 PF00583 Acetyltransferase (GNAT) family GER12_RS07710 PF08238 Sel1 repeat GER12_RS07715 PF00375 Sodium:dicarboxylate symporter family GER12_RS07725 PF03918 Cytochrome C biogenesis protein GER12_RS07730 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GER12_RS07730 PF01578 Cytochrome C assembly protein GER12_RS07735 PF03916 Polysulphide reductase, NrfD GER12_RS07740 PF00037 4Fe-4S binding domain GER12_RS07740 PF13247 4Fe-4S dicluster domain GER12_RS07745 PF13435 Cytochrome c554 and c-prime GER12_RS07745 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) GER12_RS07750 PF02335 Cytochrome c552 GER12_RS07755 PF16177 Acetyl-coenzyme A synthetase N-terminus GER12_RS07755 PF00501 AMP-binding enzyme GER12_RS07755 PF13193 AMP-binding enzyme C-terminal domain GER12_RS07760 PF04341 Protein of unknown function, DUF485 GER12_RS07765 PF00474 Sodium:solute symporter family GER12_RS07770 PF04172 LrgB-like family GER12_RS07775 PF03788 LrgA family GER12_RS07780 PF03466 LysR substrate binding domain GER12_RS07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS07785 PF00999 Sodium/hydrogen exchanger family GER12_RS07790 PF00860 Permease family GER12_RS07800 PF09278 MerR, DNA binding GER12_RS07800 PF00376 MerR family regulatory protein GER12_RS07805 PF12833 Helix-turn-helix domain GER12_RS07810 PF12792 CSS motif domain associated with EAL GER12_RS07810 PF00563 EAL domain GER12_RS07815 PF15940 Family of unknown function GER12_RS07820 PF00664 ABC transporter transmembrane region GER12_RS07820 PF00005 ABC transporter GER12_RS07850 PF00436 Single-strand binding protein family GER12_RS07855 PF17755 UvrA DNA-binding domain GER12_RS07855 PF17760 UvrA interaction domain GER12_RS07855 PF00005 ABC transporter GER12_RS07870 PF04237 YjbR GER12_RS07875 PF01894 Uncharacterised protein family UPF0047 GER12_RS07880 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GER12_RS07885 PF00155 Aminotransferase class I and II GER12_RS07890 PF00842 Alanine racemase, C-terminal domain GER12_RS07890 PF01168 Alanine racemase, N-terminal domain GER12_RS07895 PF00772 DnaB-like helicase N terminal domain GER12_RS07895 PF03796 DnaB-like helicase C terminal domain GER12_RS07900 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS07900 PF00107 Zinc-binding dehydrogenase GER12_RS07905 PF09583 Phage shock protein G (Phageshock_PspG) GER12_RS07910 PF01207 Dihydrouridine synthase (Dus) GER12_RS07920 PF01475 Ferric uptake regulator family GER12_RS07925 PF05532 CsbD-like GER12_RS07935 PF01554 MatE GER12_RS07940 PF00717 Peptidase S24-like GER12_RS07940 PF01726 LexA DNA binding domain GER12_RS07945 PF01219 Prokaryotic diacylglycerol kinase GER12_RS07950 PF01553 Acyltransferase GER12_RS07955 PF01040 UbiA prenyltransferase family GER12_RS07960 PF04345 Chorismate lyase GER12_RS07965 PF07148 Maltose operon periplasmic protein precursor (MalM) GER12_RS07970 PF02264 LamB porin GER12_RS07975 PF17912 MalK OB fold domain GER12_RS07975 PF00005 ABC transporter GER12_RS07980 PF01547 Bacterial extracellular solute-binding protein GER12_RS07985 PF14785 Maltose transport system permease protein MalF P2 domain GER12_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS07990 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS07995 PF06146 Phosphate-starvation-inducible E GER12_RS08000 PF06082 Exopolysaccharide biosynthesis protein YbjH GER12_RS08005 PF06251 Capsule biosynthesis GfcC GER12_RS08010 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF GER12_RS08020 PF00342 Phosphoglucose isomerase GER12_RS08025 PF00696 Amino acid kinase family GER12_RS08025 PF01842 ACT domain GER12_RS08030 PF08765 Mor transcription activator family GER12_RS08105 PF04138 GtrA-like protein GER12_RS08110 PF00535 Glycosyl transferase family 2 GER12_RS08135 PF07484 Phage Tail Collar Domain GER12_RS08135 PF03335 Phage tail fibre repeat GER12_RS08135 PF08400 Prophage tail fibre N-terminal GER12_RS08140 PF02413 Caudovirales tail fibre assembly protein, lambda gpK GER12_RS08160 PF00455 DeoR C terminal sensor domain GER12_RS08160 PF08220 DeoR-like helix-turn-helix domain GER12_RS08165 PF11656 YjbD family (DUF3811) GER12_RS08170 PF01479 S4 domain GER12_RS08170 PF00849 RNA pseudouridylate synthase GER12_RS08175 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GER12_RS08185 PF03575 Peptidase family S51 GER12_RS08190 PF02690 Na+/Pi-cotransporter GER12_RS08195 PF02965 Vitamin B12 dependent methionine synthase, activation domain GER12_RS08195 PF00809 Pterin binding enzyme GER12_RS08195 PF02574 Homocysteine S-methyltransferase GER12_RS08195 PF02310 B12 binding domain GER12_RS08195 PF02607 B12 binding domain GER12_RS08200 PF01614 Bacterial transcriptional regulator GER12_RS08200 PF09339 IclR helix-turn-helix domain GER12_RS08210 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GER12_RS08215 PF00463 Isocitrate lyase family GER12_RS08220 PF01274 Malate synthase GER12_RS08225 PF04204 Homoserine O-succinyltransferase GER12_RS08230 PF13673 Acetyltransferase (GNAT) domain GER12_RS08255 PF02142 MGS-like domain GER12_RS08255 PF01808 AICARFT/IMPCHase bienzyme GER12_RS08260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GER12_RS08260 PF02843 Phosphoribosylglycinamide synthetase, C domain GER12_RS08260 PF02844 Phosphoribosylglycinamide synthetase, N domain GER12_RS08265 PF02954 Bacterial regulatory protein, Fis family GER12_RS08265 PF00158 Sigma-54 interaction domain GER12_RS08265 PF00072 Response regulator receiver domain GER12_RS08270 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS08275 PF13801 Heavy-metal resistance GER12_RS08280 PF07356 Protein of unknown function (DUF1481) GER12_RS08285 PF00216 Bacterial DNA-binding protein GER12_RS08290 PF04222 Protein of unknown function (DUF416) GER12_RS08295 PF04493 Endonuclease V GER12_RS08300 PF01208 Uroporphyrinogen decarboxylase (URO-D) GER12_RS08305 PF09297 NADH pyrophosphatase zinc ribbon domain GER12_RS08305 PF00293 NUDIX domain GER12_RS08310 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GER12_RS08315 PF01964 Radical SAM ThiC family GER12_RS08315 PF13667 ThiC-associated domain GER12_RS08320 PF02581 Thiamine monophosphate synthase GER12_RS08325 PF00899 ThiF family GER12_RS08330 PF02597 ThiS family GER12_RS08335 PF05690 Thiazole biosynthesis protein ThiG GER12_RS08340 PF04055 Radical SAM superfamily GER12_RS08340 PF06968 Biotin and Thiamin Synthesis associated domain GER12_RS08360 PF04998 RNA polymerase Rpb1, domain 5 GER12_RS08360 PF05000 RNA polymerase Rpb1, domain 4 GER12_RS08360 PF04983 RNA polymerase Rpb1, domain 3 GER12_RS08360 PF00623 RNA polymerase Rpb1, domain 2 GER12_RS08360 PF04997 RNA polymerase Rpb1, domain 1 GER12_RS08365 PF04560 RNA polymerase Rpb2, domain 7 GER12_RS08365 PF10385 RNA polymerase beta subunit external 1 domain GER12_RS08365 PF04565 RNA polymerase Rpb2, domain 3 GER12_RS08365 PF04561 RNA polymerase Rpb2, domain 2 GER12_RS08365 PF04563 RNA polymerase beta subunit GER12_RS08365 PF00562 RNA polymerase Rpb2, domain 6 GER12_RS08370 PF16320 Ribosomal protein L7/L12 dimerisation domain GER12_RS08370 PF00542 Ribosomal protein L7/L12 C-terminal domain GER12_RS08375 PF00466 Ribosomal protein L10 GER12_RS08380 PF00687 Ribosomal protein L1p/L10e family GER12_RS08385 PF03946 Ribosomal protein L11, N-terminal domain GER12_RS08385 PF00298 Ribosomal protein L11, RNA binding domain GER12_RS08390 PF02357 Transcription termination factor nusG GER12_RS08390 PF00467 KOW motif GER12_RS08395 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GER12_RS08400 PF03143 Elongation factor Tu C-terminal domain GER12_RS08400 PF00009 Elongation factor Tu GTP binding domain GER12_RS08400 PF03144 Elongation factor Tu domain 2 GER12_RS08430 PF00485 Phosphoribulokinase / Uridine kinase family GER12_RS08435 PF02237 Biotin protein ligase C terminal domain GER12_RS08435 PF08279 HTH domain GER12_RS08435 PF03099 Biotin/lipoate A/B protein ligase family GER12_RS08440 PF01565 FAD binding domain GER12_RS08440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GER12_RS08470 PF01177 Asp/Glu/Hydantoin racemase GER12_RS08475 PF07715 TonB-dependent Receptor Plug Domain GER12_RS08475 PF00593 TonB dependent receptor GER12_RS08480 PF05958 tRNA (Uracil-5-)-methyltransferase GER12_RS08485 PF07226 Protein of unknown function (DUF1422) GER12_RS08490 PF00440 Bacterial regulatory proteins, tetR family GER12_RS08495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GER12_RS08495 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS08500 PF03466 LysR substrate binding domain GER12_RS08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS08505 PF14698 Argininosuccinate lyase C-terminal GER12_RS08505 PF00206 Lyase GER12_RS08510 PF00696 Amino acid kinase family GER12_RS08515 PF01118 Semialdehyde dehydrogenase, NAD binding domain GER12_RS08515 PF02774 Semialdehyde dehydrogenase, dimerisation domain GER12_RS08520 PF07687 Peptidase dimerisation domain GER12_RS08520 PF01546 Peptidase family M20/M25/M40 GER12_RS08525 PF00311 Phosphoenolpyruvate carboxylase GER12_RS08530 PF00884 Sulfatase GER12_RS08535 PF12833 Helix-turn-helix domain GER12_RS08540 PF00923 Transaldolase/Fructose-6-phosphate aldolase GER12_RS08545 PF00465 Iron-containing alcohol dehydrogenase GER12_RS08550 PF06940 Domain of unknown function (DUF1287) GER12_RS08555 PF00141 Peroxidase GER12_RS08560 PF02219 Methylenetetrahydrofolate reductase GER12_RS08565 PF00149 Calcineurin-like phosphoesterase GER12_RS08565 PF17936 Bacterial Ig domain GER12_RS08565 PF02872 5'-nucleotidase, C-terminal domain GER12_RS08580 PF05552 Conserved TM helix GER12_RS08580 PF00924 Mechanosensitive ion channel GER12_RS08585 PF00696 Amino acid kinase family GER12_RS08585 PF03447 Homoserine dehydrogenase, NAD binding domain GER12_RS08585 PF00742 Homoserine dehydrogenase GER12_RS08590 PF01053 Cys/Met metabolism PLP-dependent enzyme GER12_RS08595 PF01340 Met Apo-repressor, MetJ GER12_RS08600 PF17425 Arylsulfotransferase Ig-like domain GER12_RS08600 PF05935 Arylsulfotransferase (ASST) GER12_RS08610 PF01197 Ribosomal protein L31 GER12_RS08615 PF00270 DEAD/DEAH box helicase GER12_RS08615 PF17764 3′ DNA-binding domain (3′BD) GER12_RS08615 PF18074 Primosomal protein N C-terminal domain GER12_RS08615 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GER12_RS08615 PF00271 Helicase conserved C-terminal domain GER12_RS08620 PF00356 Bacterial regulatory proteins, lacI family GER12_RS08625 PF05036 Sporulation related domain GER12_RS08630 PF00227 Proteasome subunit GER12_RS08635 PF10431 C-terminal, D2-small domain, of ClpB protein GER12_RS08635 PF07724 AAA domain (Cdc48 subfamily) GER12_RS08635 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS08640 PF01040 UbiA prenyltransferase family GER12_RS08645 PF03737 Aldolase/RraA GER12_RS08650 PF06005 Cell division protein ZapB GER12_RS08655 PF00230 Major intrinsic protein GER12_RS08660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS08660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS08665 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GER12_RS08670 PF00175 Oxidoreductase NAD-binding domain GER12_RS08670 PF00970 Oxidoreductase FAD-binding domain GER12_RS08675 PF05656 Protein of unknown function (DUF805) GER12_RS08680 PF07305 Protein of unknown function (DUF1454) GER12_RS08685 PF00121 Triosephosphate isomerase GER12_RS08690 PF00834 Ribulose-phosphate 3 epimerase family GER12_RS08695 PF03992 Antibiotic biosynthesis monooxygenase GER12_RS08700 PF01791 DeoC/LacD family aldolase GER12_RS08705 PF13407 Periplasmic binding protein domain GER12_RS08710 PF02653 Branched-chain amino acid transport system / permease component GER12_RS08715 PF02653 Branched-chain amino acid transport system / permease component GER12_RS08720 PF00005 ABC transporter GER12_RS08725 PF04198 Putative sugar-binding domain GER12_RS08730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS08730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS08740 PF02611 CDP-diacylglycerol pyrophosphatase GER12_RS08750 PF00392 Bacterial regulatory proteins, gntR family GER12_RS08750 PF00155 Aminotransferase class I and II GER12_RS08760 PF00294 pfkB family carbohydrate kinase GER12_RS08770 PF02611 CDP-diacylglycerol pyrophosphatase GER12_RS08780 PF00365 Phosphofructokinase GER12_RS08785 PF01545 Cation efflux family GER12_RS08785 PF16916 Dimerisation domain of Zinc Transporter GER12_RS08790 PF07813 LTXXQ motif family protein GER12_RS08795 PF00486 Transcriptional regulatory protein, C terminal GER12_RS08795 PF00072 Response regulator receiver domain GER12_RS08800 PF16527 Two-component sensor protein CpxA, periplasmic domain GER12_RS08800 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS08800 PF00672 HAMP domain GER12_RS08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS08810 PF03473 MOSC domain GER12_RS08810 PF03475 3-alpha domain GER12_RS08815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GER12_RS08815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GER12_RS08820 PF03480 Bacterial extracellular solute-binding protein, family 7 GER12_RS08825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GER12_RS08830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GER12_RS08835 PF06178 Oligogalacturonate-specific porin protein (KdgM) GER12_RS08840 PF06379 L-rhamnose-proton symport protein (RhaT) GER12_RS08845 PF02311 AraC-like ligand binding domain GER12_RS08845 PF12833 Helix-turn-helix domain GER12_RS08850 PF12833 Helix-turn-helix domain GER12_RS08850 PF02311 AraC-like ligand binding domain GER12_RS08855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS08855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS08860 PF06134 L-rhamnose isomerase (RhaA) GER12_RS08865 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS08870 PF00465 Iron-containing alcohol dehydrogenase GER12_RS08875 PF05336 L-rhamnose mutarotase GER12_RS08885 PF03591 AzlC protein GER12_RS08895 PF12889 Protein of unknown function (DUF3829) GER12_RS08900 PF12889 Protein of unknown function (DUF3829) GER12_RS08905 PF02634 FdhD/NarQ family GER12_RS08915 PF09163 Formate dehydrogenase N, transmembrane GER12_RS08915 PF13247 4Fe-4S dicluster domain GER12_RS08920 PF01292 Prokaryotic cytochrome b561 GER12_RS08925 PF04216 Protein involved in formate dehydrogenase formation GER12_RS08940 PF07859 alpha/beta hydrolase fold GER12_RS08945 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system GER12_RS08950 PF01381 Helix-turn-helix GER12_RS08955 PF00583 Acetyltransferase (GNAT) family GER12_RS08955 PF09500 Putative thioesterase (yiiD_Cterm) GER12_RS08960 PF02580 D-Tyr-tRNA(Tyr) deacylase GER12_RS08965 PF03631 Virulence factor BrkB GER12_RS08970 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS08975 PF08220 DeoR-like helix-turn-helix domain GER12_RS08975 PF00455 DeoR C terminal sensor domain GER12_RS08980 PF00294 pfkB family carbohydrate kinase GER12_RS08985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GER12_RS08985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GER12_RS08990 PF01791 DeoC/LacD family aldolase GER12_RS09000 PF01263 Aldose 1-epimerase GER12_RS09005 PF01055 Glycosyl hydrolases family 31 GER12_RS09020 PF06178 Oligogalacturonate-specific porin protein (KdgM) GER12_RS09035 PF03951 Glutamine synthetase, beta-Grasp domain GER12_RS09035 PF00120 Glutamine synthetase, catalytic domain GER12_RS09040 PF00989 PAS fold GER12_RS09040 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS09045 PF00158 Sigma-54 interaction domain GER12_RS09045 PF00072 Response regulator receiver domain GER12_RS09045 PF02954 Bacterial regulatory protein, Fis family GER12_RS09055 PF06969 HemN C-terminal domain GER12_RS09055 PF04055 Radical SAM superfamily GER12_RS09060 PF04220 Der GTPase activator (YihI) GER12_RS09070 PF01926 50S ribosome-binding GTPase GER12_RS09075 PF01367 5'-3' exonuclease, C-terminal SAM fold GER12_RS09075 PF00476 DNA polymerase family A GER12_RS09075 PF01612 3'-5' exonuclease GER12_RS09075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GER12_RS09080 PF01553 Acyltransferase GER12_RS09085 PF01323 DSBA-like thioredoxin domain GER12_RS09090 PF01636 Phosphotransferase enzyme family GER12_RS09095 PF06288 Protein of unknown function (DUF1040) GER12_RS09100 PF12804 MobA-like NTP transferase domain GER12_RS09105 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GER12_RS09135 PF12724 Flavodoxin domain GER12_RS09140 PF02386 Cation transport protein GER12_RS09145 PF09186 Domain of unknown function (DUF1949) GER12_RS09145 PF01205 Uncharacterized protein family UPF0029 GER12_RS09150 PF00557 Metallopeptidase family M24 GER12_RS09155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GER12_RS09155 PF00378 Enoyl-CoA hydratase/isomerase GER12_RS09155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GER12_RS09160 PF02803 Thiolase, C-terminal domain GER12_RS09160 PF00108 Thiolase, N-terminal domain GER12_RS09165 PF17425 Arylsulfotransferase Ig-like domain GER12_RS09165 PF05935 Arylsulfotransferase (ASST) GER12_RS09170 PF00970 Oxidoreductase FAD-binding domain GER12_RS09170 PF00175 Oxidoreductase NAD-binding domain GER12_RS09175 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GER12_RS09180 PF02357 Transcription termination factor nusG GER12_RS09185 PF01026 TatD related DNase GER12_RS09190 PF00902 Sec-independent protein translocase protein (TatC) GER12_RS09200 PF02416 mttA/Hcf106 family GER12_RS09205 PF03109 ABC1 family GER12_RS09210 PF02036 SCP-2 sterol transfer family GER12_RS09215 PF01209 ubiE/COQ5 methyltransferase family GER12_RS09220 PF02646 RmuC family GER12_RS09225 PF01048 Phosphorylase superfamily GER12_RS09230 PF01738 Dienelactone hydrolase family GER12_RS09235 PF13186 Iron-sulfur cluster-binding domain GER12_RS09235 PF04055 Radical SAM superfamily GER12_RS09240 PF01717 Cobalamin-independent synthase, Catalytic domain GER12_RS09240 PF08267 Cobalamin-independent synthase, N-terminal domain GER12_RS09245 PF03466 LysR substrate binding domain GER12_RS09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS09250 PF00892 EamA-like transporter family GER12_RS09260 PF12146 Serine aminopeptidase, S33 GER12_RS09265 PF01810 LysE type translocator GER12_RS09270 PF01810 LysE type translocator GER12_RS09275 PF00570 HRDC domain GER12_RS09275 PF16124 RecQ zinc-binding GER12_RS09275 PF00271 Helicase conserved C-terminal domain GER12_RS09275 PF00270 DEAD/DEAH box helicase GER12_RS09275 PF09382 RQC domain GER12_RS09280 PF02253 Phospholipase A1 GER12_RS09285 PF03061 Thioesterase superfamily GER12_RS09290 PF00892 EamA-like transporter family GER12_RS09300 PF10947 Protein of unknown function (DUF2628) GER12_RS09305 PF01544 CorA-like Mg2+ transporter protein GER12_RS09310 PF13361 UvrD-like helicase C-terminal domain GER12_RS09310 PF00580 UvrD/REP helicase N-terminal domain GER12_RS09315 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS09320 PF00589 Phage integrase family GER12_RS09320 PF02899 Phage integrase, N-terminal SAM-like domain GER12_RS09325 PF04340 Protein of unknown function, DUF484 GER12_RS09330 PF01678 Diaminopimelate epimerase GER12_RS09335 PF13627 Prokaryotic lipoprotein-attachment site GER12_RS09350 PF01491 Frataxin-like domain GER12_RS09370 PF12633 Adenylate cyclase NT domain GER12_RS09370 PF01295 Adenylate cyclase, class-I GER12_RS09375 PF03900 Porphobilinogen deaminase, C-terminal domain GER12_RS09375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GER12_RS09380 PF02602 Uroporphyrinogen-III synthase HemD GER12_RS09385 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GER12_RS09390 PF07719 Tetratricopeptide repeat GER12_RS09390 PF07219 HemY protein N-terminus GER12_RS09415 PF00324 Amino acid permease GER12_RS09420 PF03808 Glycosyl transferase WecB/TagA/CpsF family GER12_RS09425 PF06899 WzyE protein, O-antigen assembly polymerase GER12_RS09430 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 GER12_RS09435 PF01943 Polysaccharide biosynthesis protein GER12_RS09440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GER12_RS09450 PF00483 Nucleotidyl transferase GER12_RS09455 PF16363 GDP-mannose 4,6 dehydratase GER12_RS09460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GER12_RS09460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GER12_RS09460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GER12_RS09465 PF02350 UDP-N-acetylglucosamine 2-epimerase GER12_RS09470 PF02706 Chain length determinant protein GER12_RS09475 PF00953 Glycosyl transferase family 4 GER12_RS09480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS09480 PF07498 Rho termination factor, N-terminal domain GER12_RS09480 PF07497 Rho termination factor, RNA-binding domain GER12_RS09490 PF00085 Thioredoxin GER12_RS09495 PF00270 DEAD/DEAH box helicase GER12_RS09495 PF00271 Helicase conserved C-terminal domain GER12_RS09500 PF02541 Ppx/GppA phosphatase family GER12_RS09505 PF13361 UvrD-like helicase C-terminal domain GER12_RS09505 PF00580 UvrD/REP helicase N-terminal domain GER12_RS09510 PF04973 Nicotinamide mononucleotide transporter GER12_RS09520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GER12_RS09520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GER12_RS09525 PF03466 LysR substrate binding domain GER12_RS09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS09540 PF00585 C-terminal regulatory domain of Threonine dehydratase GER12_RS09540 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS09545 PF00920 Dehydratase family GER12_RS09550 PF01063 Amino-transferase class IV GER12_RS09560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS09560 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS09560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS09565 PF08046 IlvGEDA operon leader peptide GER12_RS09570 PF01078 Magnesium chelatase, subunit ChlI GER12_RS09570 PF13335 Magnesium chelatase, subunit ChlI C-terminal GER12_RS09575 PF04219 Protein of unknown function, DUF GER12_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS09580 PF03466 LysR substrate binding domain GER12_RS09615 PF07729 FCD domain GER12_RS09615 PF00392 Bacterial regulatory proteins, gntR family GER12_RS09620 PF07690 Major Facilitator Superfamily GER12_RS09625 PF00356 Bacterial regulatory proteins, lacI family GER12_RS09630 PF00294 pfkB family carbohydrate kinase GER12_RS09635 PF13407 Periplasmic binding protein domain GER12_RS09640 PF02653 Branched-chain amino acid transport system / permease component GER12_RS09645 PF00005 ABC transporter GER12_RS09650 PF05025 RbsD / FucU transport protein family GER12_RS09655 PF02705 K+ potassium transporter GER12_RS09660 PF12592 Protein of unknown function (DUF3763) GER12_RS09660 PF07728 AAA domain (dynein-related subfamily) GER12_RS09660 PF17868 AAA lid domain GER12_RS09665 PF05762 VWA domain containing CoxE-like protein GER12_RS09670 PF03590 Aspartate-ammonia ligase GER12_RS09675 PF01037 Lrp/AsnC ligand binding domain GER12_RS09680 PF00258 Flavodoxin GER12_RS09685 PF01134 Glucose inhibited division protein A GER12_RS09685 PF13932 GidA associated domain GER12_RS09690 PF02527 rRNA small subunit methyltransferase G GER12_RS09695 PF03899 ATP synthase I chain GER12_RS09700 PF00119 ATP synthase A chain GER12_RS09705 PF00137 ATP synthase subunit C GER12_RS09710 PF00430 ATP synthase B/B' CF(0) GER12_RS09715 PF00213 ATP synthase delta (OSCP) subunit GER12_RS09720 PF02874 ATP synthase alpha/beta family, beta-barrel domain GER12_RS09720 PF00306 ATP synthase alpha/beta chain, C terminal domain GER12_RS09720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS09725 PF00231 ATP synthase GER12_RS09730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS09730 PF02874 ATP synthase alpha/beta family, beta-barrel domain GER12_RS09735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GER12_RS09735 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GER12_RS09745 PF12804 MobA-like NTP transferase domain GER12_RS09745 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS09750 PF01380 SIS domain GER12_RS09755 PF12793 Sugar transport-related sRNA regulator N-term GER12_RS09755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS09760 PF08501 Shikimate dehydrogenase substrate binding domain GER12_RS09765 PF02378 Phosphotransferase system, EIIC GER12_RS09765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS09770 PF12849 PBP superfamily domain GER12_RS09775 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS09785 PF00005 ABC transporter GER12_RS09790 PF01895 PhoU domain GER12_RS09795 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS09800 PF00860 Permease family GER12_RS09805 PF03358 NADPH-dependent FMN reductase GER12_RS09815 PF03466 LysR substrate binding domain GER12_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS09820 PF07690 Major Facilitator Superfamily GER12_RS09850 PF12631 MnmE helical domain GER12_RS09850 PF10396 GTP-binding protein TrmE N-terminus GER12_RS09850 PF01926 50S ribosome-binding GTPase GER12_RS09855 PF14849 YidC periplasmic domain GER12_RS09855 PF02096 60Kd inner membrane protein GER12_RS09860 PF01809 Putative membrane protein insertion efficiency factor GER12_RS09865 PF00825 Ribonuclease P GER12_RS09870 PF00468 Ribosomal protein L34 GER12_RS09875 PF08299 Bacterial dnaA protein helix-turn-helix GER12_RS09875 PF11638 DnaA N-terminal domain GER12_RS09875 PF00308 Bacterial dnaA protein GER12_RS09880 PF00712 DNA polymerase III beta subunit, N-terminal domain GER12_RS09880 PF02768 DNA polymerase III beta subunit, C-terminal domain GER12_RS09880 PF02767 DNA polymerase III beta subunit, central domain GER12_RS09885 PF02463 RecF/RecN/SMC N terminal domain GER12_RS09890 PF18053 DNA gyrase B subunit insert domain GER12_RS09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS09890 PF00986 DNA gyrase B subunit, carboxyl terminus GER12_RS09890 PF01751 Toprim domain GER12_RS09890 PF00204 DNA gyrase B GER12_RS09895 PF03466 LysR substrate binding domain GER12_RS09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS09900 PF13378 Enolase C-terminal domain-like GER12_RS09900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS09915 PF00392 Bacterial regulatory proteins, gntR family GER12_RS09915 PF07729 FCD domain GER12_RS09920 PF05035 2-keto-3-deoxy-galactonokinase GER12_RS09925 PF01081 KDPG and KHG aldolase GER12_RS09930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS09930 PF13378 Enolase C-terminal domain-like GER12_RS09935 PF07690 Major Facilitator Superfamily GER12_RS09940 PF00072 Response regulator receiver domain GER12_RS09940 PF00672 HAMP domain GER12_RS09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS09940 PF01627 Hpt domain GER12_RS09940 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS09945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GER12_RS09950 PF00072 Response regulator receiver domain GER12_RS09950 PF00486 Transcriptional regulatory protein, C terminal GER12_RS09955 PF03264 NapC/NirT cytochrome c family, N-terminal region GER12_RS09960 PF00384 Molybdopterin oxidoreductase GER12_RS09960 PF18364 Molybdopterin oxidoreductase N-terminal domain GER12_RS09960 PF01568 Molydopterin dinucleotide binding domain GER12_RS09965 PF02613 Nitrate reductase delta subunit GER12_RS09970 PF03150 Di-haem cytochrome c peroxidase GER12_RS09970 PF14376 Haem-binding domain GER12_RS09970 PF00034 Cytochrome c GER12_RS09975 PF00005 ABC transporter GER12_RS09980 PF03379 CcmB protein GER12_RS09985 PF01578 Cytochrome C assembly protein GER12_RS09990 PF04995 Heme exporter protein D (CcmD) GER12_RS09995 PF03100 CcmE GER12_RS10000 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GER12_RS10000 PF01578 Cytochrome C assembly protein GER12_RS10005 PF08534 Redoxin GER12_RS10010 PF03918 Cytochrome C biogenesis protein GER12_RS10015 PF07676 WD40-like Beta Propeller Repeat GER12_RS10015 PF12566 Protein of unknown function (DUF3748) GER12_RS10020 PF07119 Protein of unknown function (DUF1375) GER12_RS10025 PF00011 Hsp20/alpha crystallin family GER12_RS10030 PF00011 Hsp20/alpha crystallin family GER12_RS10035 PF02080 TrkA-C domain GER12_RS10035 PF06826 Predicted Permease Membrane Region GER12_RS10040 PF02656 Domain of unknown function (DUF202) GER12_RS10045 PF02656 Domain of unknown function (DUF202) GER12_RS10055 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS10060 PF02447 GntP family permease GER12_RS10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS10065 PF03466 LysR substrate binding domain GER12_RS10075 PF07690 Major Facilitator Superfamily GER12_RS10085 PF13939 Toxin TisB, type I toxin-antitoxin system GER12_RS10095 PF08049 IlvB leader peptide GER12_RS10100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS10100 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS10100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS10105 PF01842 ACT domain GER12_RS10110 PF00455 DeoR C terminal sensor domain GER12_RS10110 PF08220 DeoR-like helix-turn-helix domain GER12_RS10115 PF00294 pfkB family carbohydrate kinase GER12_RS10120 PF07690 Major Facilitator Superfamily GER12_RS10130 PF00072 Response regulator receiver domain GER12_RS10130 PF00196 Bacterial regulatory proteins, luxR family GER12_RS10135 PF07730 Histidine kinase GER12_RS10135 PF05231 MASE1 GER12_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS10140 PF07690 Major Facilitator Superfamily GER12_RS10145 PF07690 Major Facilitator Superfamily GER12_RS10150 PF06711 Protein of unknown function (DUF1198) GER12_RS10155 PF00392 Bacterial regulatory proteins, gntR family GER12_RS10155 PF07702 UTRA domain GER12_RS10160 PF08279 HTH domain GER12_RS10160 PF05043 Mga helix-turn-helix domain GER12_RS10160 PF00874 PRD domain GER12_RS10160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS10165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS10170 PF03611 PTS system sugar-specific permease component GER12_RS10180 PF01116 Fructose-bisphosphate aldolase class-II GER12_RS10200 PF07690 Major Facilitator Superfamily GER12_RS10205 PF00232 Glycosyl hydrolase family 1 GER12_RS10215 PF00874 PRD domain GER12_RS10215 PF00158 Sigma-54 interaction domain GER12_RS10225 PF03830 PTS system sorbose subfamily IIB component GER12_RS10225 PF03610 PTS system fructose IIA component GER12_RS10230 PF03609 PTS system sorbose-specific iic component GER12_RS10235 PF03613 PTS system mannose/fructose/sorbose family IID component GER12_RS10240 PF03841 L-seryl-tRNA selenium transferase GER12_RS10245 PF07071 KDGP aldolase GER12_RS10250 PF04754 Putative transposase, YhgA-like GER12_RS10255 PF00892 EamA-like transporter family GER12_RS10260 PF02308 MgtC family GER12_RS10265 PF00689 Cation transporting ATPase, C-terminus GER12_RS10265 PF00690 Cation transporter/ATPase, N-terminus GER12_RS10280 PF00857 Isochorismatase family GER12_RS10290 PF00486 Transcriptional regulatory protein, C terminal GER12_RS10300 PF03797 Autotransporter beta-domain GER12_RS10305 PF00196 Bacterial regulatory proteins, luxR family GER12_RS10320 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS10320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS10325 PF13953 PapC C-terminal domain GER12_RS10325 PF13954 PapC N-terminal domain GER12_RS10325 PF00577 Outer membrane usher protein GER12_RS10335 PF00419 Fimbrial protein GER12_RS10345 PF00419 Fimbrial protein GER12_RS10365 PF01055 Glycosyl hydrolases family 31 GER12_RS10365 PF13802 Galactose mutarotase-like GER12_RS10370 PF05170 AsmA family GER12_RS10375 PF00860 Permease family GER12_RS10380 PF03616 Sodium/glutamate symporter GER12_RS10385 PF00271 Helicase conserved C-terminal domain GER12_RS10385 PF00270 DEAD/DEAH box helicase GER12_RS10385 PF17191 RecG wedge domain GER12_RS10390 PF00588 SpoU rRNA Methylase family GER12_RS10390 PF12105 SpoU, rRNA methylase, C-terminal GER12_RS10395 PF13291 ACT domain GER12_RS10395 PF04607 Region found in RelA / SpoT proteins GER12_RS10395 PF02824 TGS domain GER12_RS10400 PF01192 RNA polymerase Rpb6 GER12_RS10405 PF00625 Guanylate kinase GER12_RS10410 PF03120 NAD-dependent DNA ligase OB-fold domain GER12_RS10410 PF01653 NAD-dependent DNA ligase adenylation domain GER12_RS10415 PF03458 UPF0126 domain GER12_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS10425 PF03466 LysR substrate binding domain GER12_RS10430 PF03755 YicC-like family, N-terminal region GER12_RS10430 PF08340 Domain of unknown function (DUF1732) GER12_RS10435 PF03725 3' exoribonuclease family, domain 2 GER12_RS10435 PF01138 3' exoribonuclease family, domain 1 GER12_RS10440 PF00156 Phosphoribosyl transferase domain GER12_RS10445 PF00440 Bacterial regulatory proteins, tetR family GER12_RS10450 PF00692 dUTPase GER12_RS10455 PF04127 DNA / pantothenate metabolism flavoprotein GER12_RS10455 PF02441 Flavoprotein GER12_RS10460 PF04002 RadC-like JAB domain GER12_RS10465 PF00830 Ribosomal L28 family GER12_RS10470 PF00471 Ribosomal protein L33 GER12_RS10475 PF06827 Zinc finger found in FPG and IleRS GER12_RS10475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GER12_RS10475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GER12_RS10480 PF01467 Cytidylyltransferase-like GER12_RS10485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GER12_RS10490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GER12_RS10495 PF00534 Glycosyl transferases group 1 GER12_RS10495 PF13439 Glycosyltransferase Family 4 GER12_RS10510 PF00534 Glycosyl transferases group 1 GER12_RS10510 PF13439 Glycosyltransferase Family 4 GER12_RS10515 PF08437 Glycosyl transferase family 8 C-terminal GER12_RS10515 PF01501 Glycosyl transferase family 8 GER12_RS10520 PF01501 Glycosyl transferase family 8 GER12_RS10520 PF08437 Glycosyl transferase family 8 C-terminal GER12_RS10525 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) GER12_RS10535 PF00534 Glycosyl transferases group 1 GER12_RS10540 PF04932 O-Antigen ligase GER12_RS10545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GER12_RS10550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GER12_RS10555 PF01370 NAD dependent epimerase/dehydratase family GER12_RS10560 PF00155 Aminotransferase class I and II GER12_RS10565 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS10565 PF00107 Zinc-binding dehydrogenase GER12_RS10570 PF00535 Glycosyl transferase family 2 GER12_RS10575 PF04748 Divergent polysaccharide deacetylase GER12_RS10580 PF01551 Peptidase family M23 GER12_RS10585 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GER12_RS10585 PF01676 Metalloenzyme superfamily GER12_RS10590 PF00581 Rhodanese-like domain GER12_RS10595 PF00462 Glutaredoxin GER12_RS10600 PF02556 Preprotein translocase subunit SecB GER12_RS10605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GER12_RS10605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GER12_RS10610 PF06426 Serine acetyltransferase, N-terminal GER12_RS10610 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS10615 PF07690 Major Facilitator Superfamily GER12_RS10620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS10620 PF13378 Enolase C-terminal domain-like GER12_RS10625 PF00356 Bacterial regulatory proteins, lacI family GER12_RS10630 PF00588 SpoU rRNA Methylase family GER12_RS10635 PF01070 FMN-dependent dehydrogenase GER12_RS10640 PF07729 FCD domain GER12_RS10640 PF00392 Bacterial regulatory proteins, gntR family GER12_RS10645 PF02652 L-lactate permease GER12_RS10650 PF13018 Extended Signal Peptide of Type V secretion system GER12_RS10650 PF05658 Head domain of trimeric autotransporter adhesin GER12_RS10650 PF05662 Coiled stalk of trimeric autotransporter adhesin GER12_RS10650 PF03895 YadA-like membrane anchor domain GER12_RS10655 PF11622 Protein of unknown function (DUF3251) GER12_RS10660 PF10928 Protein of unknown function (DUF2810) GER12_RS10670 PF05068 Mannitol repressor GER12_RS10675 PF08125 Mannitol dehydrogenase C-terminal domain GER12_RS10675 PF01232 Mannitol dehydrogenase Rossmann domain GER12_RS10680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS10680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS10680 PF02378 Phosphotransferase system, EIIC GER12_RS10685 PF00043 Glutathione S-transferase, C-terminal domain GER12_RS10685 PF13417 Glutathione S-transferase, N-terminal domain GER12_RS10690 PF03841 L-seryl-tRNA selenium transferase GER12_RS10690 PF12390 Selenocysteine synthase N terminal GER12_RS10695 PF00009 Elongation factor Tu GTP binding domain GER12_RS10695 PF03144 Elongation factor Tu domain 2 GER12_RS10695 PF09107 Elongation factor SelB, winged helix GER12_RS10695 PF09106 Elongation factor SelB, winged helix GER12_RS10700 PF00480 ROK family GER12_RS10705 PF00171 Aldehyde dehydrogenase family GER12_RS10710 PF07944 Beta-L-arabinofuranosidase, GH127 GER12_RS10720 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS10725 PF01261 Xylose isomerase-like TIM barrel GER12_RS10730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GER12_RS10735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS10735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS10740 PF03480 Bacterial extracellular solute-binding protein, family 7 GER12_RS10745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GER12_RS10750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GER12_RS10755 PF16154 Domain of unknown function (DUF4862) GER12_RS10760 PF04074 YhcH/YjgK/YiaL GER12_RS10765 PF02615 Malate/L-lactate dehydrogenase GER12_RS10770 PF09339 IclR helix-turn-helix domain GER12_RS10770 PF01614 Bacterial transcriptional regulator GER12_RS10775 PF13247 4Fe-4S dicluster domain GER12_RS10780 PF00155 Aminotransferase class I and II GER12_RS10785 PF00128 Alpha amylase, catalytic domain GER12_RS10790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GER12_RS10795 PF12833 Helix-turn-helix domain GER12_RS10805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS10805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS10810 PF05360 yiaA/B two helix domain GER12_RS10815 PF01757 Acyltransferase family GER12_RS10820 PF13983 YsaB-like lipoprotein GER12_RS10825 PF02091 Glycyl-tRNA synthetase alpha subunit GER12_RS10830 PF02092 Glycyl-tRNA synthetase beta subunit GER12_RS10830 PF05746 DALR anticodon binding domain GER12_RS10835 PF13333 Integrase core domain GER12_RS10835 PF00665 Integrase core domain GER12_RS10835 PF13276 HTH-like domain GER12_RS10860 PF00313 'Cold-shock' DNA-binding domain GER12_RS10865 PF01381 Helix-turn-helix GER12_RS10870 PF11254 Protein of unknown function (DUF3053) GER12_RS10875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GER12_RS10875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GER12_RS10880 PF00691 OmpA family GER12_RS10880 PF13488 Glycine zipper GER12_RS10885 PF18364 Molybdopterin oxidoreductase N-terminal domain GER12_RS10885 PF01568 Molydopterin dinucleotide binding domain GER12_RS10885 PF00384 Molybdopterin oxidoreductase GER12_RS10890 PF00583 Acetyltransferase (GNAT) family GER12_RS10895 PF03352 Methyladenine glycosylase GER12_RS10900 PF03797 Autotransporter beta-domain GER12_RS10905 PF00884 Sulfatase GER12_RS10905 PF08019 Phosphoethanolamine transferase EptA/EptB GER12_RS10925 PF00356 Bacterial regulatory proteins, lacI family GER12_RS10935 PF00860 Permease family GER12_RS10940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS10945 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS10950 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS10950 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS10955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS10955 PF00005 ABC transporter GER12_RS10960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS10960 PF00005 ABC transporter GER12_RS10965 PF03222 Tryptophan/tyrosine permease family GER12_RS10975 PF13940 Toxin Ldr, type I toxin-antitoxin system GER12_RS10980 PF11658 Cellulose biosynthesis protein BcsG GER12_RS10985 PF11120 Cellulose biosynthesis protein BcsF GER12_RS10990 PF10995 Cellulose biosynthesis GIL GER12_RS10995 PF10945 Cellulose biosynthesis protein BcsR GER12_RS11000 PF06564 Cellulose biosynthesis protein BcsQ GER12_RS11005 PF00535 Glycosyl transferase family 2 GER12_RS11005 PF07238 PilZ domain GER12_RS11010 PF03170 Bacterial cellulose synthase subunit GER12_RS11015 PF01270 Glycosyl hydrolases family 8 GER12_RS11020 PF13176 Tetratricopeptide repeat GER12_RS11020 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GER12_RS11025 PF00563 EAL domain GER12_RS11025 PF00672 HAMP domain GER12_RS11025 PF17154 Gammaproteobacterial periplasmic sensor domain GER12_RS11025 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS11030 PF00375 Sodium:dicarboxylate symporter family GER12_RS11035 PF05193 Peptidase M16 inactive domain GER12_RS11035 PF00675 Insulinase (Peptidase family M16) GER12_RS11040 PF00294 pfkB family carbohydrate kinase GER12_RS11045 PF00563 EAL domain GER12_RS11050 PF05170 AsmA family GER12_RS11055 PF07690 Major Facilitator Superfamily GER12_RS11055 PF00083 Sugar (and other) transporter GER12_RS11060 PF03631 Virulence factor BrkB GER12_RS11065 PF03466 LysR substrate binding domain GER12_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS11070 PF00196 Bacterial regulatory proteins, luxR family GER12_RS11085 PF01204 Trehalase GER12_RS11090 PF00392 Bacterial regulatory proteins, gntR family GER12_RS11090 PF07702 UTRA domain GER12_RS11095 PF01380 SIS domain GER12_RS11100 PF00294 pfkB family carbohydrate kinase GER12_RS11105 PF03605 Anaerobic c4-dicarboxylate membrane transporter GER12_RS11110 PF17763 Glutaminase/Asparaginase C-terminal domain GER12_RS11110 PF00710 Asparaginase, N-terminal GER12_RS11115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GER12_RS11115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS11120 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GER12_RS11125 PF01569 PAP2 superfamily GER12_RS11130 PF01432 Peptidase family M3 GER12_RS11135 PF04445 Putative SAM-dependent methyltransferase GER12_RS11140 PF00854 POT family GER12_RS11145 PF00582 Universal stress protein family GER12_RS11150 PF10625 Universal stress protein B (UspB) GER12_RS11155 PF01384 Phosphate transporter family GER12_RS11165 PF13533 Biotin-lipoyl like GER12_RS11170 PF00005 ABC transporter GER12_RS11180 PF08753 NikR C terminal nickel binding domain GER12_RS11180 PF01402 Ribbon-helix-helix protein, copG family GER12_RS11185 PF01648 4'-phosphopantetheinyl transferase superfamily GER12_RS11190 PF01594 AI-2E family transporter GER12_RS11195 PF07690 Major Facilitator Superfamily GER12_RS11200 PF08786 DcrB GER12_RS11205 PF02592 Putative vitamin uptake transporter GER12_RS11210 PF01206 Sulfurtransferase TusA GER12_RS11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS11215 PF00672 HAMP domain GER12_RS11215 PF02203 Tar ligand binding domain homologue GER12_RS11220 PF00403 Heavy-metal-associated domain GER12_RS11225 PF07947 YhhN family GER12_RS11230 PF10694 Protein of unknown function (DUF2500) GER12_RS11235 PF06611 Protein of unknown function (DUF1145) GER12_RS11245 PF02881 SRP54-type protein, helical bundle domain GER12_RS11245 PF00448 SRP54-type protein, GTPase domain GER12_RS11250 PF00005 ABC transporter GER12_RS11255 PF18075 FtsX extracellular domain GER12_RS11255 PF02687 FtsX-like permease family GER12_RS11260 PF04545 Sigma-70, region 4 GER12_RS11260 PF04542 Sigma-70 region 2 GER12_RS11265 PF13458 Periplasmic binding protein GER12_RS11275 PF12568 Acetyltransferase (GNAT) domain, PanZ GER12_RS11280 PF13458 Periplasmic binding protein GER12_RS11285 PF02653 Branched-chain amino acid transport system / permease component GER12_RS11290 PF11862 Domain of unknown function (DUF3382) GER12_RS11290 PF02653 Branched-chain amino acid transport system / permease component GER12_RS11295 PF00005 ABC transporter GER12_RS11295 PF12399 Branched-chain amino acid ATP-binding cassette transporter GER12_RS11300 PF00005 ABC transporter GER12_RS11305 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GER12_RS11315 PF13416 Bacterial extracellular solute-binding protein GER12_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS11330 PF17912 MalK OB fold domain GER12_RS11330 PF00005 ABC transporter GER12_RS11335 PF03009 Glycerophosphoryl diester phosphodiesterase family GER12_RS11340 PF10956 Protein of unknown function (DUF2756) GER12_RS11350 PF02126 Phosphotriesterase family GER12_RS11365 PF00294 pfkB family carbohydrate kinase GER12_RS11370 PF00583 Acetyltransferase (GNAT) family GER12_RS11375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GER12_RS11375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GER12_RS11380 PF17954 Quercetinase C-terminal cupin domain GER12_RS11380 PF02678 Pirin GER12_RS11385 PF00356 Bacterial regulatory proteins, lacI family GER12_RS11385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GER12_RS11390 PF01202 Shikimate kinase GER12_RS11395 PF02447 GntP family permease GER12_RS11405 PF02774 Semialdehyde dehydrogenase, dimerisation domain GER12_RS11405 PF01118 Semialdehyde dehydrogenase, NAD binding domain GER12_RS11410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GER12_RS11410 PF02806 Alpha amylase, C-terminal all-beta domain GER12_RS11410 PF00128 Alpha amylase, catalytic domain GER12_RS11415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GER12_RS11415 PF18390 Glycogen debranching enzyme C-terminal domain GER12_RS11415 PF00128 Alpha amylase, catalytic domain GER12_RS11420 PF00483 Nucleotidyl transferase GER12_RS11425 PF00534 Glycosyl transferases group 1 GER12_RS11425 PF08323 Starch synthase catalytic domain GER12_RS11430 PF00343 Carbohydrate phosphorylase GER12_RS11435 PF01614 Bacterial transcriptional regulator GER12_RS11435 PF09339 IclR helix-turn-helix domain GER12_RS11440 PF00701 Dihydrodipicolinate synthetase family GER12_RS11445 PF00920 Dehydratase family GER12_RS11450 PF07690 Major Facilitator Superfamily GER12_RS11455 PF00465 Iron-containing alcohol dehydrogenase GER12_RS11470 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GER12_RS11470 PF01266 FAD dependent oxidoreductase GER12_RS11475 PF00581 Rhodanese-like domain GER12_RS11480 PF01694 Rhomboid family GER12_RS11480 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GER12_RS11485 PF08220 DeoR-like helix-turn-helix domain GER12_RS11485 PF00455 DeoR C terminal sensor domain GER12_RS11490 PF17874 MalT-like TPR region GER12_RS11490 PF00196 Bacterial regulatory proteins, luxR family GER12_RS11495 PF00343 Carbohydrate phosphorylase GER12_RS11500 PF02446 4-alpha-glucanotransferase GER12_RS11505 PF02447 GntP family permease GER12_RS11510 PF01521 Iron-sulphur cluster biosynthesis GER12_RS11510 PF01106 NifU-like domain GER12_RS11515 PF00156 Phosphoribosyl transferase domain GER12_RS11520 PF00561 alpha/beta hydrolase fold GER12_RS11525 PF04754 Putative transposase, YhgA-like GER12_RS11530 PF09012 FeoC like transcriptional regulator GER12_RS11535 PF07670 Nucleoside recognition GER12_RS11535 PF07664 Ferrous iron transport protein B C terminus GER12_RS11535 PF17910 FeoB cytosolic helical domain GER12_RS11535 PF02421 Ferrous iron transport protein B GER12_RS11540 PF04023 FeoA domain GER12_RS11545 PF17674 HHH domain GER12_RS11545 PF00575 S1 RNA binding domain GER12_RS11545 PF16921 Tex protein YqgF-like domain GER12_RS11545 PF09371 Tex-like protein N-terminal domain GER12_RS11550 PF03449 Transcription elongation factor, N-terminal GER12_RS11550 PF01272 Transcription elongation factor, GreA/GreB, C-term GER12_RS11555 PF00486 Transcriptional regulatory protein, C terminal GER12_RS11555 PF00072 Response regulator receiver domain GER12_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS11560 PF00672 HAMP domain GER12_RS11560 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS11565 PF01293 Phosphoenolpyruvate carboxykinase GER12_RS11570 PF13687 Domain of unknown function (DUF4153) GER12_RS11575 PF01430 Hsp33 protein GER12_RS11580 PF01479 S4 domain GER12_RS11585 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS11590 PF07095 Intracellular growth attenuator protein IgaA GER12_RS11595 PF00293 NUDIX domain GER12_RS11600 PF00912 Transglycosylase GER12_RS11600 PF17092 Penicillin-binding protein OB-like domain GER12_RS11600 PF00905 Penicillin binding protein transpeptidase domain GER12_RS11610 PF05137 Fimbrial assembly protein (PilN) GER12_RS11620 PF10748 DNA utilization proteins HofP GER12_RS11625 PF00263 Bacterial type II and III secretion system protein GER12_RS11625 PF03958 Bacterial type II/III secretion system short domain GER12_RS11630 PF01202 Shikimate kinase GER12_RS11635 PF01761 3-dehydroquinate synthase GER12_RS11640 PF05036 Sporulation related domain GER12_RS11645 PF02086 D12 class N6 adenine-specific DNA methyltransferase GER12_RS11650 PF00834 Ribulose-phosphate 3 epimerase family GER12_RS11655 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS11660 PF00579 tRNA synthetases class I (W and Y) GER12_RS11665 PF13978 Protein of unknown function (DUF4223) GER12_RS11675 PF10414 Sirohaem synthase dimerisation region GER12_RS11675 PF14824 Sirohaem biosynthesis protein central GER12_RS11675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS11680 PF01226 Formate/nitrite transporter GER12_RS11685 PF13806 Rieske-like [2Fe-2S] domain GER12_RS11690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GER12_RS11690 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS11690 PF18267 Rubredoxin NAD+ reductase C-terminal domain GER12_RS11690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GER12_RS11690 PF04324 BFD-like [2Fe-2S] binding domain GER12_RS11695 PF07690 Major Facilitator Superfamily GER12_RS11700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GER12_RS11705 PF10832 Protein of unknown function (DUF2559) GER12_RS11710 PF02661 Fic/DOC family GER12_RS11715 PF00117 Glutamine amidotransferase class-I GER12_RS11720 PF00202 Aminotransferase class-III GER12_RS11725 PF12805 FUSC-like inner membrane protein yccS GER12_RS11730 PF00027 Cyclic nucleotide-binding domain GER12_RS11730 PF13545 Crp-like helix-turn-helix domain GER12_RS11735 PF02566 OsmC-like protein GER12_RS11740 PF00485 Phosphoribulokinase / Uridine kinase family GER12_RS11745 PF06794 Uncharacterised protein family (UPF0270) GER12_RS11750 PF00561 alpha/beta hydrolase fold GER12_RS11755 PF08803 Putative mono-oxygenase ydhR GER12_RS11760 PF03466 LysR substrate binding domain GER12_RS11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS11765 PF00005 ABC transporter GER12_RS11765 PF12848 ABC transporter GER12_RS11770 PF02525 Flavodoxin-like fold GER12_RS11775 PF02254 TrkA-N domain GER12_RS11775 PF00999 Sodium/hydrogen exchanger family GER12_RS11780 PF09526 Probable metal-binding protein (DUF2387) GER12_RS11785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GER12_RS11790 PF04102 SlyX GER12_RS11795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GER12_RS11795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GER12_RS11800 PF08348 YheO-like PAS domain GER12_RS11800 PF13309 HTH domain GER12_RS11805 PF02635 DsrE/DsrF-like family GER12_RS11810 PF02635 DsrE/DsrF-like family GER12_RS11815 PF04077 DsrH like protein GER12_RS11820 PF00164 Ribosomal protein S12/S23 GER12_RS11825 PF00177 Ribosomal protein S7p/S5e GER12_RS11830 PF03144 Elongation factor Tu domain 2 GER12_RS11830 PF14492 Elongation Factor G, domain II GER12_RS11830 PF03764 Elongation factor G, domain IV GER12_RS11830 PF00679 Elongation factor G C-terminus GER12_RS11830 PF00009 Elongation factor Tu GTP binding domain GER12_RS11835 PF03143 Elongation factor Tu C-terminal domain GER12_RS11835 PF03144 Elongation factor Tu domain 2 GER12_RS11835 PF00009 Elongation factor Tu GTP binding domain GER12_RS11840 PF04324 BFD-like [2Fe-2S] binding domain GER12_RS11845 PF00210 Ferritin-like domain GER12_RS11850 PF01478 Type IV leader peptidase family GER12_RS11855 PF00338 Ribosomal protein S10p/S20e GER12_RS11860 PF00297 Ribosomal protein L3 GER12_RS11865 PF00573 Ribosomal protein L4/L1 family GER12_RS11870 PF00276 Ribosomal protein L23 GER12_RS11875 PF00181 Ribosomal Proteins L2, RNA binding domain GER12_RS11875 PF03947 Ribosomal Proteins L2, C-terminal domain GER12_RS11880 PF00203 Ribosomal protein S19 GER12_RS11885 PF00237 Ribosomal protein L22p/L17e GER12_RS11890 PF07650 KH domain GER12_RS11890 PF00189 Ribosomal protein S3, C-terminal domain GER12_RS11895 PF00252 Ribosomal protein L16p/L10e GER12_RS11900 PF00831 Ribosomal L29 protein GER12_RS11905 PF00366 Ribosomal protein S17 GER12_RS11910 PF00238 Ribosomal protein L14p/L23e GER12_RS11915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GER12_RS11915 PF00467 KOW motif GER12_RS11920 PF00673 ribosomal L5P family C-terminus GER12_RS11920 PF00281 Ribosomal protein L5 GER12_RS11925 PF00253 Ribosomal protein S14p/S29e GER12_RS11930 PF00410 Ribosomal protein S8 GER12_RS11935 PF00347 Ribosomal protein L6 GER12_RS11940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GER12_RS11945 PF00333 Ribosomal protein S5, N-terminal domain GER12_RS11945 PF03719 Ribosomal protein S5, C-terminal domain GER12_RS11950 PF00327 Ribosomal protein L30p/L7e GER12_RS11955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GER12_RS11960 PF00344 SecY translocase GER12_RS11965 PF00444 Ribosomal protein L36 GER12_RS11970 PF00416 Ribosomal protein S13/S18 GER12_RS11975 PF00411 Ribosomal protein S11 GER12_RS11980 PF01479 S4 domain GER12_RS11980 PF00163 Ribosomal protein S4/S9 N-terminal domain GER12_RS11985 PF01000 RNA polymerase Rpb3/RpoA insert domain GER12_RS11985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GER12_RS11985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GER12_RS11990 PF01196 Ribosomal protein L17 GER12_RS11995 PF09350 Domain of unknown function (DUF1992) GER12_RS12000 PF13411 MerR HTH family regulatory protein GER12_RS12005 PF03889 Alternative ribosome-rescue factor A GER12_RS12010 PF01741 Large-conductance mechanosensitive channel, MscL GER12_RS12015 PF02254 TrkA-N domain GER12_RS12015 PF02080 TrkA-C domain GER12_RS12020 PF01189 16S rRNA methyltransferase RsmB/F GER12_RS12020 PF01029 NusB family GER12_RS12025 PF02911 Formyl transferase, C-terminal domain GER12_RS12025 PF00551 Formyl transferase GER12_RS12030 PF01327 Polypeptide deformylase GER12_RS12035 PF02481 DNA recombination-mediator protein A GER12_RS12035 PF17782 DprA winged helix domain GER12_RS12040 PF04361 Protein of unknown function (DUF494) GER12_RS12045 PF01396 Topoisomerase DNA binding C4 zinc finger GER12_RS12050 PF01300 Telomere recombination GER12_RS12055 PF01488 Shikimate / quinate 5-dehydrogenase GER12_RS12055 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GER12_RS12055 PF08501 Shikimate dehydrogenase substrate binding domain GER12_RS12060 PF07369 Protein of unknown function (DUF1488) GER12_RS12065 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS12110 PF00873 AcrB/AcrD/AcrF family GER12_RS12115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS12115 PF00529 HlyD membrane-fusion protein of T1SS GER12_RS12120 PF00440 Bacterial regulatory proteins, tetR family GER12_RS12120 PF08361 MAATS-type transcriptional repressor, C-terminal region GER12_RS12125 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS12125 PF03707 Bacterial signalling protein N terminal repeat GER12_RS12125 PF00563 EAL domain GER12_RS12130 PF10831 Protein of unknown function (DUF2556) GER12_RS12135 PF01555 DNA methylase GER12_RS12140 PF02954 Bacterial regulatory protein, Fis family GER12_RS12145 PF01207 Dihydrouridine synthase (Dus) GER12_RS12155 PF00474 Sodium:solute symporter family GER12_RS12160 PF06196 Protein of unknown function (DUF997) GER12_RS12165 PF02785 Biotin carboxylase C-terminal domain GER12_RS12165 PF00289 Biotin carboxylase, N-terminal domain GER12_RS12165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GER12_RS12170 PF00364 Biotin-requiring enzyme GER12_RS12175 PF01794 Ferric reductase like transmembrane component GER12_RS12180 PF00174 Oxidoreductase molybdopterin binding domain GER12_RS12185 PF00107 Zinc-binding dehydrogenase GER12_RS12185 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS12190 PF00563 EAL domain GER12_RS12190 PF17157 Gammaproteobacterial periplasmic sensor domain GER12_RS12190 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS12200 PF04085 rod shape-determining protein MreC GER12_RS12205 PF04093 rod shape-determining protein MreD GER12_RS12210 PF02545 Maf-like protein GER12_RS12215 PF10150 Ribonuclease E/G family GER12_RS12215 PF00575 S1 RNA binding domain GER12_RS12220 PF13116 Protein of unknown function GER12_RS12220 PF13502 AsmA-like C-terminal region GER12_RS12225 PF01523 Putative modulator of DNA gyrase GER12_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS12230 PF03466 LysR substrate binding domain GER12_RS12235 PF07869 Protein of unknown function (DUF1656) GER12_RS12240 PF13533 Biotin-lipoyl like GER12_RS12245 PF04632 Fusaric acid resistance protein family GER12_RS12250 PF01337 Barstar (barnase inhibitor) GER12_RS12255 PF07338 Protein of unknown function (DUF1471) GER12_RS12260 PF07338 Protein of unknown function (DUF1471) GER12_RS12265 PF01316 Arginine repressor, DNA binding domain GER12_RS12265 PF02863 Arginine repressor, C-terminal domain GER12_RS12270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GER12_RS12270 PF00056 lactate/malate dehydrogenase, NAD binding domain GER12_RS12275 PF00392 Bacterial regulatory proteins, gntR family GER12_RS12275 PF07702 UTRA domain GER12_RS12285 PF00939 Sodium:sulfate symporter transmembrane region GER12_RS12290 PF05681 Fumarate hydratase (Fumerase) GER12_RS12295 PF05683 Fumarase C-terminus GER12_RS12300 PF04277 Oxaloacetate decarboxylase, gamma chain GER12_RS12305 PF02436 Conserved carboxylase domain GER12_RS12305 PF00682 HMGL-like GER12_RS12305 PF00364 Biotin-requiring enzyme GER12_RS12310 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GER12_RS12315 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GER12_RS12320 PF13180 PDZ domain GER12_RS12325 PF13180 PDZ domain GER12_RS12325 PF00595 PDZ domain GER12_RS12330 PF06295 Protein of unknown function (DUF1043) GER12_RS12335 PF03969 AFG1-like ATPase GER12_RS12340 PF00572 Ribosomal protein L13 GER12_RS12345 PF00380 Ribosomal protein S9/S16 GER12_RS12355 PF00043 Glutathione S-transferase, C-terminal domain GER12_RS12355 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS12360 PF04386 Stringent starvation protein B GER12_RS12365 PF00392 Bacterial regulatory proteins, gntR family GER12_RS12365 PF07729 FCD domain GER12_RS12370 PF00701 Dihydrodipicolinate synthetase family GER12_RS12375 PF07690 Major Facilitator Superfamily GER12_RS12380 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GER12_RS12385 PF00480 ROK family GER12_RS12390 PF04074 YhcH/YjgK/YiaL GER12_RS12395 PF07969 Amidohydrolase family GER12_RS12400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GER12_RS12405 PF06250 YhcG PDDEXK nuclease domain GER12_RS12405 PF17761 DUF1016 N-terminal domain GER12_RS12410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GER12_RS12410 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS12415 PF01645 Conserved region in glutamate synthase GER12_RS12415 PF04898 Glutamate synthase central domain GER12_RS12415 PF00310 Glutamine amidotransferases class-II GER12_RS12415 PF01493 GXGXG motif GER12_RS12420 PF16199 Radical_SAM C-terminal domain GER12_RS12420 PF04055 Radical SAM superfamily GER12_RS12425 PF00072 Response regulator receiver domain GER12_RS12425 PF00989 PAS fold GER12_RS12425 PF18415 Histidine kinase receptor ArcB trans-membrane domain GER12_RS12425 PF01627 Hpt domain GER12_RS12425 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS12435 PF00912 Transglycosylase GER12_RS12440 PF10707 PhoP regulatory network protein YrbL GER12_RS12445 PF00381 PTS HPr component phosphorylation site GER12_RS12450 PF03668 P-loop ATPase protein family GER12_RS12455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS12460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GER12_RS12465 PF04963 Sigma-54 factor, core binding domain GER12_RS12465 PF00309 Sigma-54 factor, Activator interacting domain (AID) GER12_RS12465 PF04552 Sigma-54, DNA binding domain GER12_RS12470 PF12399 Branched-chain amino acid ATP-binding cassette transporter GER12_RS12470 PF00005 ABC transporter GER12_RS12475 PF03968 OstA-like protein GER12_RS12480 PF06835 Lipopolysaccharide-assembly, LptC-related GER12_RS12490 PF01380 SIS domain GER12_RS12490 PF00571 CBS domain GER12_RS12495 PF01699 Sodium/calcium exchanger protein GER12_RS12500 PF00005 ABC transporter GER12_RS12505 PF02405 Permease MlaE GER12_RS12510 PF02470 MlaD protein GER12_RS12515 PF05494 MlaC protein GER12_RS12520 PF13466 STAS domain GER12_RS12525 PF01722 BolA-like protein GER12_RS12530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GER12_RS12535 PF13693 Winged helix-turn-helix DNA-binding GER12_RS12540 PF00348 Polyprenyl synthetase GER12_RS12545 PF00829 Ribosomal prokaryotic L21 protein GER12_RS12550 PF01016 Ribosomal L27 protein GER12_RS12555 PF00892 EamA-like transporter family GER12_RS12560 PF01926 50S ribosome-binding GTPase GER12_RS12560 PF01018 GTP1/OBG GER12_RS12565 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GER12_RS12570 PF01272 Transcription elongation factor, GreA/GreB, C-term GER12_RS12570 PF03449 Transcription elongation factor, N-terminal GER12_RS12575 PF01985 CRS1 / YhbY (CRM) domain GER12_RS12580 PF01728 FtsJ-like methyltransferase GER12_RS12585 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS12585 PF01434 Peptidase family M41 GER12_RS12585 PF06480 FtsH Extracellular GER12_RS12585 PF17862 AAA+ lid domain GER12_RS12590 PF00809 Pterin binding enzyme GER12_RS12595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GER12_RS12595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GER12_RS12595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GER12_RS12595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GER12_RS12600 PF03840 Preprotein translocase SecG subunit GER12_RS12615 PF00764 Arginosuccinate synthase GER12_RS12625 PF17384 RimP C-terminal SH3 domain GER12_RS12625 PF02576 RimP N-terminal domain GER12_RS12630 PF08529 NusA N-terminal domain GER12_RS12630 PF13184 NusA-like KH domain GER12_RS12635 PF00009 Elongation factor Tu GTP binding domain GER12_RS12635 PF11987 Translation-initiation factor 2 GER12_RS12635 PF04760 Translation initiation factor IF-2, N-terminal region GER12_RS12635 PF08364 Bacterial translation initiation factor IF-2 associated region GER12_RS12640 PF02033 Ribosome-binding factor A GER12_RS12645 PF16198 tRNA pseudouridylate synthase B C-terminal domain GER12_RS12645 PF09157 Pseudouridine synthase II TruB, C-terminal GER12_RS12645 PF01509 TruB family pseudouridylate synthase (N terminal domain) GER12_RS12650 PF00312 Ribosomal protein S15 GER12_RS12655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GER12_RS12655 PF00575 S1 RNA binding domain GER12_RS12655 PF00013 KH domain GER12_RS12655 PF03725 3' exoribonuclease family, domain 2 GER12_RS12655 PF01138 3' exoribonuclease family, domain 1 GER12_RS12660 PF13181 Tetratricopeptide repeat GER12_RS12660 PF07719 Tetratricopeptide repeat GER12_RS12670 PF03880 DbpA RNA binding domain GER12_RS12670 PF00271 Helicase conserved C-terminal domain GER12_RS12670 PF12343 Cold shock protein DEAD box A GER12_RS12670 PF00270 DEAD/DEAH box helicase GER12_RS12675 PF03222 Tryptophan/tyrosine permease family GER12_RS12680 PF00296 Luciferase-like monooxygenase GER12_RS12685 PF01136 Peptidase family U32 GER12_RS12690 PF01136 Peptidase family U32 GER12_RS12695 PF02036 SCP-2 sterol transfer family GER12_RS12700 PF13508 Acetyltransferase (GNAT) domain GER12_RS12705 PF01541 GIY-YIG catalytic domain GER12_RS12715 PF01965 DJ-1/PfpI family GER12_RS12720 PF13460 NAD(P)H-binding GER12_RS12725 PF04972 BON domain GER12_RS12730 PF13580 SIS domain GER12_RS12735 PF02021 Uncharacterised protein family UPF0102 GER12_RS12740 PF04348 LppC putative lipoprotein GER12_RS12745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS12750 PF08220 DeoR-like helix-turn-helix domain GER12_RS12755 PF00107 Zinc-binding dehydrogenase GER12_RS12755 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS12760 PF03611 PTS system sugar-specific permease component GER12_RS12765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS12770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS12775 PF08013 Tagatose 6 phosphate kinase GER12_RS12780 PF01116 Fructose-bisphosphate aldolase class-II GER12_RS12785 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GER12_RS12785 PF08666 SAF domain GER12_RS12790 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS12795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GER12_RS12795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GER12_RS12800 PF02595 Glycerate kinase family GER12_RS12810 PF03466 LysR substrate binding domain GER12_RS12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS12815 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS12820 PF03222 Tryptophan/tyrosine permease family GER12_RS12825 PF00871 Acetokinase family GER12_RS12830 PF01228 Glycine radical GER12_RS12830 PF02901 Pyruvate formate lyase-like GER12_RS12835 PF03315 Serine dehydratase beta chain GER12_RS12835 PF03313 Serine dehydratase alpha chain GER12_RS12845 PF03313 Serine dehydratase alpha chain GER12_RS12855 PF17954 Quercetinase C-terminal cupin domain GER12_RS12855 PF02678 Pirin GER12_RS12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS12860 PF03466 LysR substrate binding domain GER12_RS12865 PF05656 Protein of unknown function (DUF805) GER12_RS12870 PF13409 Glutathione S-transferase, N-terminal domain GER12_RS12875 PF07681 DoxX GER12_RS12880 PF13997 YqjK-like protein GER12_RS12885 PF07332 Putative Actinobacterial Holin-X, holin superfamily III GER12_RS12890 PF05957 Bacterial protein of unknown function (DUF883) GER12_RS12895 PF06476 Protein of unknown function (DUF1090) GER12_RS12900 PF13721 SecD export protein N-terminal TM region GER12_RS12905 PF09335 SNARE associated Golgi protein GER12_RS12910 PF00375 Sodium:dicarboxylate symporter family GER12_RS12915 PF03741 Integral membrane protein TerC family GER12_RS12920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GER12_RS12925 PF02698 DUF218 domain GER12_RS12930 PF01863 Protein of unknown function DUF45 GER12_RS12935 PF05175 Methyltransferase small domain GER12_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS12940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GER12_RS12945 PF00202 Aminotransferase class-III GER12_RS12950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS12950 PF08447 PAS fold GER12_RS12955 PF02203 Tar ligand binding domain homologue GER12_RS12955 PF00672 HAMP domain GER12_RS12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS12960 PF03551 Transcriptional regulator PadR-like family GER12_RS12965 PF04954 Siderophore-interacting protein GER12_RS12965 PF08021 Siderophore-interacting FAD-binding domain GER12_RS12975 PF03167 Uracil DNA glycosylase superfamily GER12_RS12980 PF04545 Sigma-70, region 4 GER12_RS12980 PF04539 Sigma-70 region 3 GER12_RS12980 PF04542 Sigma-70 region 2 GER12_RS12980 PF00140 Sigma-70 factor, region 1.2 GER12_RS12980 PF03979 Sigma-70 factor, region 1.1 GER12_RS12980 PF04546 Sigma-70, non-essential region GER12_RS12985 PF08275 DNA primase catalytic core, N-terminal domain GER12_RS12985 PF01807 CHC2 zinc finger GER12_RS12985 PF08278 DNA primase DnaG DnaB-binding GER12_RS12985 PF10410 DnaB-helicase binding domain of primase GER12_RS12990 PF01165 Ribosomal protein S21 GER12_RS12995 PF00814 Glycoprotease family GER12_RS13010 PF02660 Glycerol-3-phosphate acyltransferase GER12_RS13015 PF02152 Dihydroneopterin aldolase GER12_RS13020 PF02673 Bacitracin resistance protein BacA GER12_RS13025 PF01966 HD domain GER12_RS13025 PF01743 Poly A polymerase head domain GER12_RS13025 PF12627 Probable RNA and SrmB- binding site of polymerase A GER12_RS13030 PF08239 Bacterial SH3 domain GER12_RS13035 PF01928 CYTH domain GER12_RS13040 PF03710 Glutamate-ammonia ligase adenylyltransferase GER12_RS13040 PF08335 GlnD PII-uridylyltransferase GER12_RS13045 PF00294 pfkB family carbohydrate kinase GER12_RS13045 PF01467 Cytidylyltransferase-like GER12_RS13055 PF15975 Flotillin GER12_RS13055 PF01145 SPFH domain / Band 7 family GER12_RS13060 PF07290 Protein of unknown function (DUF1449) GER12_RS13065 PF08971 Glycogen synthesis protein GER12_RS13070 PF04380 Membrane fusogenic activity GER12_RS13075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GER12_RS13080 PF02600 Disulfide bond formation protein DsbB GER12_RS13085 PF01323 DSBA-like thioredoxin domain GER12_RS13090 PF17425 Arylsulfotransferase Ig-like domain GER12_RS13090 PF05935 Arylsulfotransferase (ASST) GER12_RS13095 PF02535 ZIP Zinc transporter GER12_RS13100 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GER12_RS13105 PF03738 Glutathionylspermidine synthase preATP-grasp GER12_RS13110 PF06693 Protein of unknown function (DUF1190) GER12_RS13115 PF02321 Outer membrane efflux protein GER12_RS13120 PF00293 NUDIX domain GER12_RS13125 PF06853 Protein of unknown function (DUF1249) GER12_RS13130 PF00149 Calcineurin-like phosphoesterase GER12_RS13135 PF05728 Uncharacterised protein family (UPF0227) GER12_RS13140 PF00986 DNA gyrase B subunit, carboxyl terminus GER12_RS13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS13140 PF01751 Toprim domain GER12_RS13140 PF00204 DNA gyrase B GER12_RS13145 PF03992 Antibiotic biosynthesis monooxygenase GER12_RS13150 PF02525 Flavodoxin-like fold GER12_RS13155 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS13155 PF08521 Two-component sensor kinase N-terminal GER12_RS13160 PF00486 Transcriptional regulatory protein, C terminal GER12_RS13160 PF00072 Response regulator receiver domain GER12_RS13165 PF04076 Bacterial OB fold (BOF) protein GER12_RS13170 PF06445 GyrI-like small molecule binding domain GER12_RS13175 PF00521 DNA gyrase/topoisomerase IV, subunit A GER12_RS13175 PF03989 DNA gyrase C-terminal domain, beta-propeller GER12_RS13180 PF01553 Acyltransferase GER12_RS13185 PF07732 Multicopper oxidase GER12_RS13185 PF00394 Multicopper oxidase GER12_RS13185 PF07731 Multicopper oxidase GER12_RS13190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GER12_RS13200 PF03480 Bacterial extracellular solute-binding protein, family 7 GER12_RS13205 PF11842 Domain of unknown function (DUF3362) GER12_RS13205 PF04055 Radical SAM superfamily GER12_RS13205 PF08497 Radical SAM N-terminal GER12_RS13220 PF00939 Sodium:sulfate symporter transmembrane region GER12_RS13225 PF00248 Aldo/keto reductase family GER12_RS13230 PF00465 Iron-containing alcohol dehydrogenase GER12_RS13235 PF06719 AraC-type transcriptional regulator N-terminus GER12_RS13235 PF12833 Helix-turn-helix domain GER12_RS13240 PF09335 SNARE associated Golgi protein GER12_RS13245 PF01053 Cys/Met metabolism PLP-dependent enzyme GER12_RS13250 PF01618 MotA/TolQ/ExbB proton channel family GER12_RS13255 PF02472 Biopolymer transport protein ExbD/TolR GER12_RS13280 PF03350 Uncharacterized protein family, UPF0114 GER12_RS13285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS13285 PF00672 HAMP domain GER12_RS13285 PF02203 Tar ligand binding domain homologue GER12_RS13290 PF11115 Protein of unknown function (DUF2623) GER12_RS13295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GER12_RS13295 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GER12_RS13300 PF13247 4Fe-4S dicluster domain GER12_RS13305 PF03916 Polysulphide reductase, NrfD GER12_RS13310 PF00374 Nickel-dependent hydrogenase GER12_RS13315 PF01750 Hydrogenase maturation protease GER12_RS13320 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE GER12_RS13325 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GER12_RS13330 PF01455 HupF/HypC family GER12_RS13345 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS13350 PF03738 Glutathionylspermidine synthase preATP-grasp GER12_RS13350 PF05257 CHAP domain GER12_RS13360 PF02614 Glucuronate isomerase GER12_RS13365 PF01232 Mannitol dehydrogenase Rossmann domain GER12_RS13365 PF08125 Mannitol dehydrogenase C-terminal domain GER12_RS13370 PF03786 D-mannonate dehydratase (UxuA) GER12_RS13375 PF07690 Major Facilitator Superfamily GER12_RS13385 PF01522 Polysaccharide deacetylase GER12_RS13395 PF04965 Gene 25-like lysozyme GER12_RS13400 PF00171 Aldehyde dehydrogenase family GER12_RS13405 PF01266 FAD dependent oxidoreductase GER12_RS13415 PF13520 Amino acid permease GER12_RS13425 PF00196 Bacterial regulatory proteins, luxR family GER12_RS13430 PF04055 Radical SAM superfamily GER12_RS13435 PF00884 Sulfatase GER12_RS13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS13440 PF03466 LysR substrate binding domain GER12_RS13445 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS13450 PF01575 MaoC like domain GER12_RS13455 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GER12_RS13455 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GER12_RS13460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GER12_RS13470 PF04474 Protein of unknown function (DUF554) GER12_RS13475 PF01276 Orn/Lys/Arg decarboxylase, major domain GER12_RS13475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GER12_RS13475 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GER12_RS13480 PF03825 Nucleoside H+ symporter GER12_RS13485 PF01464 Transglycosylase SLT domain GER12_RS13485 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GER12_RS13490 PF04362 Bacterial Fe(2+) trafficking GER12_RS13495 PF00633 Helix-hairpin-helix motif GER12_RS13495 PF00730 HhH-GPD superfamily base excision DNA repair protein GER12_RS13495 PF14815 NUDIX domain GER12_RS13500 PF02390 Putative methyltransferase GER12_RS13505 PF04320 Protein with unknown function (DUF469) GER12_RS13510 PF11101 Protein of unknown function (DUF2884) GER12_RS13515 PF17763 Glutaminase/Asparaginase C-terminal domain GER12_RS13515 PF00710 Asparaginase, N-terminal GER12_RS13520 PF06717 Protein of unknown function (DUF1202) GER12_RS13525 PF06969 HemN C-terminal domain GER12_RS13525 PF04055 Radical SAM superfamily GER12_RS13530 PF01725 Ham1 family GER12_RS13535 PF02594 Uncharacterised ACR, YggU family COG1872 GER12_RS13540 PF02325 YGGT family GER12_RS13545 PF01168 Alanine racemase, N-terminal domain GER12_RS13550 PF00437 Type II/IV secretion system protein GER12_RS13560 PF03652 Holliday junction resolvase GER12_RS13565 PF02622 Uncharacterized ACR, COG1678 GER12_RS13570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GER12_RS13570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GER12_RS13575 PF04452 RNA methyltransferase GER12_RS13580 PF04231 Endonuclease I GER12_RS13585 PF17283 SprT-like zinc ribbon domain GER12_RS13585 PF10263 SprT-like family GER12_RS13590 PF00083 Sugar (and other) transporter GER12_RS13595 PF02773 S-adenosylmethionine synthetase, C-terminal domain GER12_RS13595 PF02772 S-adenosylmethionine synthetase, central domain GER12_RS13595 PF00438 S-adenosylmethionine synthetase, N-terminal domain GER12_RS13605 PF17430 Uncharacterized YqgC-like GER12_RS13615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GER12_RS13615 PF17944 Arginine decarboxylase C-terminal helical extension GER12_RS13615 PF17810 Arginine decarboxylase helical bundle domain GER12_RS13625 PF00392 Bacterial regulatory proteins, gntR family GER12_RS13625 PF07729 FCD domain GER12_RS13635 PF08125 Mannitol dehydrogenase C-terminal domain GER12_RS13635 PF01232 Mannitol dehydrogenase Rossmann domain GER12_RS13640 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS13640 PF00107 Zinc-binding dehydrogenase GER12_RS13645 PF02615 Malate/L-lactate dehydrogenase GER12_RS13650 PF04074 YhcH/YjgK/YiaL GER12_RS13655 PF12697 Alpha/beta hydrolase family GER12_RS13660 PF00491 Arginase family GER12_RS13665 PF01435 Peptidase family M48 GER12_RS13670 PF00456 Transketolase, thiamine diphosphate binding domain GER12_RS13670 PF02779 Transketolase, pyrimidine binding domain GER12_RS13670 PF02780 Transketolase, C-terminal domain GER12_RS13675 PF00005 ABC transporter GER12_RS13680 PF00005 ABC transporter GER12_RS13700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GER12_RS13700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GER12_RS13705 PF00162 Phosphoglycerate kinase GER12_RS13710 PF01116 Fructose-bisphosphate aldolase class-II GER12_RS13715 PF00924 Mechanosensitive ion channel GER12_RS13715 PF05552 Conserved TM helix GER12_RS13720 PF01810 LysE type translocator GER12_RS13725 PF04402 Protein of unknown function (DUF541) GER12_RS13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS13730 PF03466 LysR substrate binding domain GER12_RS13735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GER12_RS13740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GER12_RS13740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GER12_RS13740 PF01842 ACT domain GER12_RS13745 PF01812 5-formyltetrahydrofolate cyclo-ligase family GER12_RS13755 PF05164 Cell division protein ZapA GER12_RS13760 PF03695 Uncharacterised protein family (UPF0149) GER12_RS13765 PF05195 Aminopeptidase P, N-terminal domain GER12_RS13765 PF00557 Metallopeptidase family M24 GER12_RS13770 PF01494 FAD binding domain GER12_RS13775 PF01494 FAD binding domain GER12_RS13780 PF01571 Aminomethyltransferase folate-binding domain GER12_RS13780 PF08669 Glycine cleavage T-protein C-terminal barrel domain GER12_RS13785 PF01597 Glycine cleavage H-protein GER12_RS13790 PF02347 Glycine cleavage system P-protein GER12_RS13800 PF00232 Glycosyl hydrolase family 1 GER12_RS13810 PF03006 Haemolysin-III related GER12_RS13815 PF01571 Aminomethyltransferase folate-binding domain GER12_RS13820 PF03937 Flavinator of succinate dehydrogenase GER12_RS13825 PF07254 Membrane-bound toxin component of toxin-antitoxin system GER12_RS13830 PF00258 Flavodoxin GER12_RS13835 PF00589 Phage integrase family GER12_RS13835 PF02899 Phage integrase, N-terminal SAM-like domain GER12_RS13840 PF13098 Thioredoxin-like domain GER12_RS13840 PF10411 Disulfide bond isomerase protein N-terminus GER12_RS13845 PF01368 DHH family GER12_RS13845 PF17768 RecJ OB domain GER12_RS13845 PF02272 DHHA1 domain GER12_RS13855 PF01336 OB-fold nucleic acid binding domain GER12_RS13855 PF00152 tRNA synthetases class II (D, K and N) GER12_RS13860 PF00293 NUDIX domain GER12_RS13865 PF01551 Peptidase family M23 GER12_RS13865 PF01476 LysM domain GER12_RS13885 PF01850 PIN domain GER12_RS13890 PF13505 Outer membrane protein beta-barrel domain GER12_RS13905 PF13954 PapC N-terminal domain GER12_RS13905 PF13953 PapC C-terminal domain GER12_RS13905 PF00577 Outer membrane usher protein GER12_RS13910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS13910 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS13930 PF03824 High-affinity nickel-transport protein GER12_RS13935 PF02583 Metal-sensitive transcriptional repressor GER12_RS13940 PF03222 Tryptophan/tyrosine permease family GER12_RS13950 PF03466 LysR substrate binding domain GER12_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS13955 PF02803 Thiolase, C-terminal domain GER12_RS13955 PF00108 Thiolase, N-terminal domain GER12_RS13960 PF04962 KduI/IolB family GER12_RS13970 PF00083 Sugar (and other) transporter GER12_RS13975 PF01177 Asp/Glu/Hydantoin racemase GER12_RS13980 PF03466 LysR substrate binding domain GER12_RS13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS13985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GER12_RS13985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GER12_RS13990 PF00356 Bacterial regulatory proteins, lacI family GER12_RS13995 PF00356 Bacterial regulatory proteins, lacI family GER12_RS14000 PF00501 AMP-binding enzyme GER12_RS14000 PF01553 Acyltransferase GER12_RS14005 PF07690 Major Facilitator Superfamily GER12_RS14010 PF00248 Aldo/keto reductase family GER12_RS14015 PF06004 Bacterial protein of unknown function (DUF903) GER12_RS14020 PF03741 Integral membrane protein TerC family GER12_RS14025 PF02976 DNA mismatch repair enzyme MutH GER12_RS14030 PF00293 NUDIX domain GER12_RS14035 PF05524 PEP-utilising enzyme, N-terminal GER12_RS14035 PF00391 PEP-utilising enzyme, mobile domain GER12_RS14035 PF02896 PEP-utilising enzyme, TIM barrel domain GER12_RS14035 PF01590 GAF domain GER12_RS14040 PF01790 Prolipoprotein diacylglyceryl transferase GER12_RS14045 PF00303 Thymidylate synthase GER12_RS14050 PF07963 Prokaryotic N-terminal methylation motif GER12_RS14055 PF07963 Prokaryotic N-terminal methylation motif GER12_RS14060 PF10713 Protein of unknown function (DUF2509) GER12_RS14065 PF07963 Prokaryotic N-terminal methylation motif GER12_RS14065 PF12528 Type II secretion prepilin peptidase dependent protein C GER12_RS14070 PF17946 RecC C-terminal domain GER12_RS14075 PF05193 Peptidase M16 inactive domain GER12_RS14075 PF00675 Insulinase (Peptidase family M16) GER12_RS14075 PF16187 Middle or third domain of peptidase_M16 GER12_RS14080 PF12705 PD-(D/E)XK nuclease superfamily GER12_RS14080 PF00580 UvrD/REP helicase N-terminal domain GER12_RS14080 PF13361 UvrD-like helicase C-terminal domain GER12_RS14085 PF13538 UvrD-like helicase C-terminal domain GER12_RS14090 PF00583 Acetyltransferase (GNAT) family GER12_RS14090 PF00696 Amino acid kinase family GER12_RS14095 PF01520 N-acetylmuramoyl-L-alanine amidase GER12_RS14095 PF11741 AMIN domain GER12_RS14110 PF03562 MltA specific insert domain GER12_RS14110 PF06725 3D domain GER12_RS14115 PF00899 ThiF family GER12_RS14120 PF00892 EamA-like transporter family GER12_RS14125 PF02657 Fe-S metabolism associated domain GER12_RS14130 PF00266 Aminotransferase class-V GER12_RS14135 PF06004 Bacterial protein of unknown function (DUF903) GER12_RS14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS14140 PF03466 LysR substrate binding domain GER12_RS14145 PF04241 Protein of unknown function (DUF423) GER12_RS14150 PF01728 FtsJ-like methyltransferase GER12_RS14150 PF18125 RlmM ferredoxin-like domain GER12_RS14155 PF00455 DeoR C terminal sensor domain GER12_RS14155 PF08220 DeoR-like helix-turn-helix domain GER12_RS14160 PF05025 RbsD / FucU transport protein family GER12_RS14165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GER12_RS14165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GER12_RS14170 PF07882 L-fucose isomerase, second N-terminal domain GER12_RS14170 PF07881 L-fucose isomerase, first N-terminal domain GER12_RS14170 PF02952 L-fucose isomerase, C-terminal domain GER12_RS14175 PF07690 Major Facilitator Superfamily GER12_RS14180 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS14185 PF00465 Iron-containing alcohol dehydrogenase GER12_RS14190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GER12_RS14190 PF01367 5'-3' exonuclease, C-terminal SAM fold GER12_RS14195 PF03315 Serine dehydratase beta chain GER12_RS14195 PF03313 Serine dehydratase alpha chain GER12_RS14205 PF03641 Possible lysine decarboxylase GER12_RS14205 PF11892 Domain of unknown function (DUF3412) GER12_RS14205 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GER12_RS14210 PF14489 QueF-like protein GER12_RS14210 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GER12_RS14215 PF07348 Syd protein (SUKH-2) GER12_RS14225 PF04287 tRNA pseudouridine synthase C GER12_RS14230 PF00849 RNA pseudouridylate synthase GER12_RS14235 PF00258 Flavodoxin GER12_RS14240 PF07690 Major Facilitator Superfamily GER12_RS14245 PF13378 Enolase C-terminal domain-like GER12_RS14245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS14250 PF13378 Enolase C-terminal domain-like GER12_RS14255 PF02595 Glycerate kinase family GER12_RS14260 PF00672 HAMP domain GER12_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS14260 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS14260 PF01627 Hpt domain GER12_RS14260 PF00072 Response regulator receiver domain GER12_RS14260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GER12_RS14265 PF01938 TRAM domain GER12_RS14265 PF05958 tRNA (Uracil-5-)-methyltransferase GER12_RS14270 PF13291 ACT domain GER12_RS14270 PF04607 Region found in RelA / SpoT proteins GER12_RS14270 PF02824 TGS domain GER12_RS14275 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GER12_RS14285 PF03819 MazG nucleotide pyrophosphohydrolase domain GER12_RS14290 PF00117 Glutamine amidotransferase class-I GER12_RS14290 PF06418 CTP synthase N-terminus GER12_RS14295 PF00113 Enolase, C-terminal TIM barrel domain GER12_RS14295 PF03952 Enolase, N-terminal domain GER12_RS14300 PF04055 Radical SAM superfamily GER12_RS14305 PF12706 Beta-lactamase superfamily domain GER12_RS14305 PF03099 Biotin/lipoate A/B protein ligase family GER12_RS14310 PF01242 6-pyruvoyl tetrahydropterin synthase GER12_RS14315 PF00175 Oxidoreductase NAD-binding domain GER12_RS14315 PF00667 FAD binding domain GER12_RS14315 PF00258 Flavodoxin GER12_RS14320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GER12_RS14320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GER12_RS14325 PF01507 Phosphoadenosine phosphosulfate reductase family GER12_RS14330 PF11047 Salmonella outer protein D GER12_RS14335 PF18019 HD domain GER12_RS14335 PF00271 Helicase conserved C-terminal domain GER12_RS14335 PF00270 DEAD/DEAH box helicase GER12_RS14340 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) GER12_RS14350 PF09344 CT1975-like protein GER12_RS14355 PF09704 CRISPR-associated protein (Cas_Cas5) GER12_RS14365 PF01867 CRISPR associated protein Cas1 GER12_RS14370 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) GER12_RS14375 PF04389 Peptidase family M28 GER12_RS14380 PF01507 Phosphoadenosine phosphosulfate reductase family GER12_RS14385 PF00009 Elongation factor Tu GTP binding domain GER12_RS14395 PF12084 Protein of unknown function (DUF3561) GER12_RS14400 PF04977 Septum formation initiator GER12_RS14405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GER12_RS14410 PF02542 YgbB family GER12_RS14415 PF01142 tRNA pseudouridine synthase D (TruD) GER12_RS14420 PF01975 Survival protein SurE GER12_RS14430 PF01551 Peptidase family M23 GER12_RS14430 PF01476 LysM domain GER12_RS14435 PF04539 Sigma-70 region 3 GER12_RS14435 PF00140 Sigma-70 factor, region 1.2 GER12_RS14435 PF04542 Sigma-70 region 2 GER12_RS14435 PF04545 Sigma-70, region 4 GER12_RS14445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GER12_RS14450 PF02441 Flavoprotein GER12_RS14455 PF01047 MarR family GER12_RS14460 PF00455 DeoR C terminal sensor domain GER12_RS14460 PF08220 DeoR-like helix-turn-helix domain GER12_RS14465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GER12_RS14465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GER12_RS14470 PF07005 Sugar-binding N-terminal domain GER12_RS14470 PF17042 Nucleotide-binding C-terminal domain GER12_RS14475 PF00596 Class II Aldolase and Adducin N-terminal domain GER12_RS14480 PF01261 Xylose isomerase-like TIM barrel GER12_RS14485 PF01370 NAD dependent epimerase/dehydratase family GER12_RS14490 PF02447 GntP family permease GER12_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS14495 PF03466 LysR substrate binding domain GER12_RS14500 PF07690 Major Facilitator Superfamily GER12_RS14510 PF01624 MutS domain I GER12_RS14510 PF05192 MutS domain III GER12_RS14510 PF05188 MutS domain II GER12_RS14510 PF00488 MutS domain V GER12_RS14510 PF05190 MutS family domain IV GER12_RS14535 PF00149 Calcineurin-like phosphoesterase GER12_RS14560 PF04741 InvH outer membrane lipoprotein GER12_RS14565 PF12833 Helix-turn-helix domain GER12_RS14570 PF03958 Bacterial type II/III secretion system short domain GER12_RS14570 PF00263 Bacterial type II and III secretion system protein GER12_RS14575 PF07201 HrpJ-like domain GER12_RS14580 PF00771 FHIPEP family GER12_RS14585 PF03519 Invasion protein B family GER12_RS14590 PF02874 ATP synthase alpha/beta family, beta-barrel domain GER12_RS14590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS14590 PF18269 T3SS EscN ATPase C-terminal domain GER12_RS14595 PF02090 Salmonella surface presentation of antigen gene type M protein GER12_RS14600 PF02510 Surface presentation of antigens protein GER12_RS14605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GER12_RS14610 PF00813 FliP family GER12_RS14615 PF01313 Bacterial export proteins, family 3 GER12_RS14620 PF01311 Bacterial export proteins, family 1 GER12_RS14625 PF01312 FlhB HrpN YscU SpaS Family GER12_RS14630 PF07720 Tetratricopeptide repeat GER12_RS14635 PF04888 Secretion system effector C (SseC) like family GER12_RS14635 PF16535 Type III cell invasion protein SipB GER12_RS14640 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) GER12_RS14645 PF06511 Type III secretion systems tip complex components GER12_RS14650 PF09052 SipA N-terminal domain GER12_RS14655 PF00550 Phosphopantetheine attachment site GER12_RS14665 PF05932 Tir chaperone protein (CesT) family GER12_RS14670 PF00102 Protein-tyrosine phosphatase GER12_RS14670 PF09119 SicP binding GER12_RS14670 PF03545 Yersinia virulence determinant (YopE) GER12_RS14675 PF01464 Transglycosylase SLT domain GER12_RS14680 PF00486 Transcriptional regulatory protein, C terminal GER12_RS14685 PF12833 Helix-turn-helix domain GER12_RS14690 PF09480 Type III secretion system protein PrgH-EprH (PrgH) GER12_RS14695 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GER12_RS14705 PF01514 Secretory protein of YscJ/FliF family GER12_RS14710 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) GER12_RS14725 PF12833 Helix-turn-helix domain GER12_RS14740 PF00950 ABC 3 transport family GER12_RS14745 PF00950 ABC 3 transport family GER12_RS14750 PF00005 ABC transporter GER12_RS14755 PF01297 Zinc-uptake complex component A periplasmic GER12_RS14760 PF11756 Nitrous oxide-stimulated promoter GER12_RS14765 PF00158 Sigma-54 interaction domain GER12_RS14765 PF02954 Bacterial regulatory protein, Fis family GER12_RS14765 PF01590 GAF domain GER12_RS14770 PF02769 AIR synthase related protein, C-terminal domain GER12_RS14770 PF00586 AIR synthase related protein, N-terminal domain GER12_RS14775 PF01924 Hydrogenase formation hypA family GER12_RS14780 PF01455 HupF/HypC family GER12_RS14785 PF02492 CobW/HypB/UreG, nucleotide-binding domain GER12_RS14790 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GER12_RS14795 PF11046 Transcriptional repressor of hyc and hyp operons GER12_RS14800 PF13247 4Fe-4S dicluster domain GER12_RS14805 PF00361 Proton-conducting membrane transporter GER12_RS14810 PF00146 NADH dehydrogenase GER12_RS14815 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GER12_RS14815 PF00374 Nickel-dependent hydrogenase GER12_RS14815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GER12_RS14820 PF12838 4Fe-4S dicluster domain GER12_RS14825 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GER12_RS14830 PF07450 Formate hydrogenlyase maturation protein HycH GER12_RS14835 PF01750 Hydrogenase maturation protease GER12_RS14845 PF12800 4Fe-4S binding domain GER12_RS14845 PF13247 4Fe-4S dicluster domain GER12_RS14850 PF07503 HypF finger GER12_RS14850 PF01300 Telomere recombination GER12_RS14850 PF17788 HypF Kae1-like domain GER12_RS14850 PF00708 Acylphosphatase GER12_RS14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS14855 PF18113 Rubredoxin binding C-terminal domain GER12_RS14860 PF00258 Flavodoxin GER12_RS14860 PF00753 Metallo-beta-lactamase superfamily GER12_RS14860 PF00301 Rubredoxin GER12_RS14865 PF01590 GAF domain GER12_RS14865 PF00158 Sigma-54 interaction domain GER12_RS14870 PF01380 SIS domain GER12_RS14870 PF00571 CBS domain GER12_RS14875 PF08220 DeoR-like helix-turn-helix domain GER12_RS14875 PF00455 DeoR C terminal sensor domain GER12_RS14880 PF06923 Glucitol operon activator protein (GutM) GER12_RS14885 PF00106 short chain dehydrogenase GER12_RS14890 PF03829 PTS system glucitol/sorbitol-specific IIA component GER12_RS14895 PF03612 Sorbitol phosphotransferase enzyme II N-terminus GER12_RS14895 PF07663 Sorbitol phosphotransferase enzyme II C-terminus GER12_RS14900 PF03608 PTS system enzyme II sorbitol-specific factor GER12_RS14905 PF13406 Transglycosylase SLT domain GER12_RS14910 PF02464 Competence-damaged protein GER12_RS14915 PF00154 recA bacterial DNA recombination protein GER12_RS14920 PF02631 RecX family GER12_RS14925 PF01411 tRNA synthetases class II (A) GER12_RS14925 PF02272 DHHA1 domain GER12_RS14925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GER12_RS14930 PF02599 Global regulator protein family GER12_RS14960 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS14965 PF09335 SNARE associated Golgi protein GER12_RS14970 PF04262 Glutamate-cysteine ligase GER12_RS14975 PF02664 S-Ribosylhomocysteinase (LuxS) GER12_RS14985 PF07690 Major Facilitator Superfamily GER12_RS14990 PF00529 HlyD membrane-fusion protein of T1SS GER12_RS14990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS14995 PF01047 MarR family GER12_RS15000 PF07690 Major Facilitator Superfamily GER12_RS15005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GER12_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS15015 PF00571 CBS domain GER12_RS15015 PF00005 ABC transporter GER12_RS15020 PF00268 Ribonucleotide reductase, small chain GER12_RS15025 PF02867 Ribonucleotide reductase, barrel domain GER12_RS15025 PF00317 Ribonucleotide reductase, all-alpha domain GER12_RS15025 PF08343 Ribonucleotide reductase N-terminal GER12_RS15030 PF07972 NrdI Flavodoxin like GER12_RS15035 PF00462 Glutaredoxin GER12_RS15040 PF02627 Carboxymuconolactone decarboxylase family GER12_RS15045 PF00155 Aminotransferase class I and II GER12_RS15045 PF00392 Bacterial regulatory proteins, gntR family GER12_RS15050 PF05957 Bacterial protein of unknown function (DUF883) GER12_RS15055 PF09400 Protein of unknown function (DUF2002) GER12_RS15060 PF06610 L-alanine exporter GER12_RS15065 PF00816 H-NS histone family GER12_RS15075 PF11127 Protein of unknown function (DUF2892) GER12_RS15075 PF00581 Rhodanese-like domain GER12_RS15080 PF01022 Bacterial regulatory protein, arsR family GER12_RS15085 PF01679 Proteolipid membrane potential modulator GER12_RS15090 PF01476 LysM domain GER12_RS15090 PF04972 BON domain GER12_RS15095 PF00392 Bacterial regulatory proteins, gntR family GER12_RS15095 PF07729 FCD domain GER12_RS15100 PF00324 Amino acid permease GER12_RS15105 PF00202 Aminotransferase class-III GER12_RS15110 PF00171 Aldehyde dehydrogenase family GER12_RS15115 PF01266 FAD dependent oxidoreductase GER12_RS15120 PF08943 CsiD GER12_RS15125 PF01970 Tripartite tricarboxylate transporter TctA family GER12_RS15140 PF00072 Response regulator receiver domain GER12_RS15140 PF00486 Transcriptional regulatory protein, C terminal GER12_RS15145 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS15145 PF08521 Two-component sensor kinase N-terminal GER12_RS15150 PF03824 High-affinity nickel-transport protein GER12_RS15160 PF04393 Protein of unknown function (DUF535) GER12_RS15165 PF00805 Pentapeptide repeats (8 copies) GER12_RS15175 PF07715 TonB-dependent Receptor Plug Domain GER12_RS15175 PF00593 TonB dependent receptor GER12_RS15180 PF00756 Putative esterase GER12_RS15190 PF00005 ABC transporter GER12_RS15190 PF00664 ABC transporter transmembrane region GER12_RS15195 PF06722 Protein of unknown function (DUF1205) GER12_RS15200 PF02796 Helix-turn-helix domain of resolvase GER12_RS15200 PF00239 Resolvase, N terminal domain GER12_RS15205 PF00700 Bacterial flagellin C-terminal helical region GER12_RS15205 PF08884 Flagellin D3 domain GER12_RS15205 PF00669 Bacterial flagellin N-terminal helical region GER12_RS15210 PF03614 Repressor of phase-1 flagellin GER12_RS15225 PF17345 Family of unknown function (DUF5375) GER12_RS15250 PF04606 Ogr/Delta-like zinc finger GER12_RS15275 PF00529 HlyD membrane-fusion protein of T1SS GER12_RS15275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS15280 PF00005 ABC transporter GER12_RS15280 PF00664 ABC transporter transmembrane region GER12_RS15295 PF01668 SmpB protein GER12_RS15300 PF03364 Polyketide cyclase / dehydrase and lipid transport GER12_RS15305 PF03658 RnfH family Ubiquitin GER12_RS15310 PF04355 SmpA / OmlA family GER12_RS15315 PF02463 RecF/RecN/SMC N terminal domain GER12_RS15320 PF01513 ATP-NAD kinase GER12_RS15325 PF01025 GrpE GER12_RS15335 PF03471 Transporter associated domain GER12_RS15335 PF01595 Cyclin M transmembrane N-terminal domain GER12_RS15335 PF00571 CBS domain GER12_RS15340 PF01578 Cytochrome C assembly protein GER12_RS15345 PF02881 SRP54-type protein, helical bundle domain GER12_RS15345 PF02978 Signal peptide binding domain GER12_RS15345 PF00448 SRP54-type protein, GTPase domain GER12_RS15350 PF00886 Ribosomal protein S16 GER12_RS15355 PF05239 PRC-barrel domain GER12_RS15355 PF01782 RimM N-terminal domain GER12_RS15360 PF01746 tRNA (Guanine-1)-methyltransferase GER12_RS15365 PF01245 Ribosomal protein L19 GER12_RS15370 PF17152 Periplasmic sensor domain GER12_RS15370 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS15375 PF13689 YfiR/HmsC-like GER12_RS15380 PF00793 DAHP synthetase I family GER12_RS15385 PF02153 Prephenate dehydrogenase GER12_RS15385 PF01817 Chorismate mutase type II GER12_RS15390 PF08450 SMP-30/Gluconolactonase/LRE-like region GER12_RS15395 PF01817 Chorismate mutase type II GER12_RS15395 PF00800 Prephenate dehydratase GER12_RS15405 PF02899 Phage integrase, N-terminal SAM-like domain GER12_RS15405 PF00589 Phage integrase family GER12_RS15535 PF07484 Phage Tail Collar Domain GER12_RS15535 PF03335 Phage tail fibre repeat GER12_RS15535 PF08400 Prophage tail fibre N-terminal GER12_RS15560 PF06470 SMC proteins Flexible Hinge Domain GER12_RS15560 PF02463 RecF/RecN/SMC N terminal domain GER12_RS15570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GER12_RS15575 PF13525 Outer membrane lipoprotein GER12_RS15580 PF00849 RNA pseudouridylate synthase GER12_RS15580 PF01479 S4 domain GER12_RS15590 PF00004 ATPase family associated with various cellular activities (AAA) GER12_RS15590 PF02861 Clp amino terminal domain, pathogenicity island component GER12_RS15590 PF07724 AAA domain (Cdc48 subfamily) GER12_RS15590 PF17871 AAA lid domain GER12_RS15590 PF10431 C-terminal, D2-small domain, of ClpB protein GER12_RS15620 PF00083 Sugar (and other) transporter GER12_RS15625 PF10043 Predicted periplasmic lipoprotein (DUF2279) GER12_RS15630 PF13091 PLD-like domain GER12_RS15635 PF13607 Succinyl-CoA ligase like flavodoxin domain GER12_RS15635 PF13380 CoA binding domain GER12_RS15635 PF00583 Acetyltransferase (GNAT) family GER12_RS15645 PF00085 Thioredoxin GER12_RS15650 PF00588 SpoU rRNA Methylase family GER12_RS15650 PF08032 RNA 2'-O ribose methyltransferase substrate binding GER12_RS15655 PF03167 Uracil DNA glycosylase superfamily GER12_RS15660 PF01228 Glycine radical GER12_RS15665 PF01810 LysE type translocator GER12_RS15670 PF03466 LysR substrate binding domain GER12_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS15675 PF00271 Helicase conserved C-terminal domain GER12_RS15675 PF00270 DEAD/DEAH box helicase GER12_RS15680 PF05175 Methyltransferase small domain GER12_RS15685 PF00890 FAD binding domain GER12_RS15685 PF02910 Fumarate reductase flavoprotein C-term GER12_RS15695 PF08281 Sigma-70, region 4 GER12_RS15695 PF04542 Sigma-70 region 2 GER12_RS15700 PF03873 Anti sigma-E protein RseA, C-terminal domain GER12_RS15700 PF03872 Anti sigma-E protein RseA, N-terminal domain GER12_RS15705 PF17188 MucB/RseB C-terminal domain GER12_RS15705 PF03888 MucB/RseB N-terminal domain GER12_RS15715 PF06421 GTP-binding protein LepA C-terminus GER12_RS15715 PF00679 Elongation factor G C-terminus GER12_RS15715 PF00009 Elongation factor Tu GTP binding domain GER12_RS15715 PF03144 Elongation factor Tu domain 2 GER12_RS15720 PF10502 Signal peptidase, peptidase S26 GER12_RS15725 PF00035 Double-stranded RNA binding motif GER12_RS15725 PF14622 Ribonuclease-III-like GER12_RS15730 PF07650 KH domain GER12_RS15730 PF01926 50S ribosome-binding GTPase GER12_RS15735 PF02565 Recombination protein O C terminal GER12_RS15735 PF11967 Recombination protein O N terminal GER12_RS15740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GER12_RS15745 PF01648 4'-phosphopantetheinyl transferase superfamily GER12_RS15750 PF12838 4Fe-4S dicluster domain GER12_RS15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS15755 PF03466 LysR substrate binding domain GER12_RS15760 PF07690 Major Facilitator Superfamily GER12_RS15765 PF02558 Ketopantoate reductase PanE/ApbA GER12_RS15765 PF08546 Ketopantoate reductase PanE/ApbA C terminal GER12_RS15770 PF01418 Helix-turn-helix domain, rpiR family GER12_RS15770 PF01380 SIS domain GER12_RS15775 PF01380 SIS domain GER12_RS15780 PF00367 phosphotransferase system, EIIB GER12_RS15780 PF02378 Phosphotransferase system, EIIC GER12_RS15790 PF14437 MafB19-like deaminase GER12_RS15795 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS15795 PF01464 Transglycosylase SLT domain GER12_RS15805 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GER12_RS15805 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GER12_RS15805 PF02769 AIR synthase related protein, C-terminal domain GER12_RS15810 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS15815 PF13942 YfhG lipoprotein GER12_RS15820 PF00072 Response regulator receiver domain GER12_RS15820 PF00158 Sigma-54 interaction domain GER12_RS15825 PF00543 Nitrogen regulatory protein P-II GER12_RS15830 PF00854 POT family GER12_RS15835 PF01276 Orn/Lys/Arg decarboxylase, major domain GER12_RS15835 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GER12_RS15835 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GER12_RS15840 PF13520 Amino acid permease GER12_RS15845 PF18500 CadC C-terminal domain 1 GER12_RS15845 PF00486 Transcriptional regulatory protein, C terminal GER12_RS15850 PF00175 Oxidoreductase NAD-binding domain GER12_RS15850 PF00042 Globin GER12_RS15850 PF00970 Oxidoreductase FAD-binding domain GER12_RS15855 PF00464 Serine hydroxymethyltransferase GER12_RS15860 PF12832 MFS_1 like family GER12_RS15865 PF00874 PRD domain GER12_RS15875 PF03824 High-affinity nickel-transport protein GER12_RS15880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GER12_RS15880 PF13187 4Fe-4S dicluster domain GER12_RS15880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GER12_RS15885 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GER12_RS15885 PF00175 Oxidoreductase NAD-binding domain GER12_RS15890 PF17179 4Fe-4S dicluster domain GER12_RS15895 PF12146 Serine aminopeptidase, S33 GER12_RS15900 PF00459 Inositol monophosphatase family GER12_RS15905 PF00588 SpoU rRNA Methylase family GER12_RS15910 PF02082 Transcriptional regulator GER12_RS15915 PF00266 Aminotransferase class-V GER12_RS15920 PF01592 NifU-like N terminal domain GER12_RS15925 PF01521 Iron-sulphur cluster biosynthesis GER12_RS15930 PF07743 HSCB C-terminal oligomerisation domain GER12_RS15935 PF00012 Hsp70 protein GER12_RS15940 PF00111 2Fe-2S iron-sulfur cluster binding domain GER12_RS15945 PF04384 Iron-sulphur cluster assembly GER12_RS15950 PF12404 Peptidase GER12_RS15950 PF00883 Cytosol aminopeptidase family, catalytic domain GER12_RS15955 PF07179 SseB protein N-terminal domain GER12_RS15955 PF14581 SseB protein C-terminal domain GER12_RS15970 PF00581 Rhodanese-like domain GER12_RS15975 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GER12_RS15975 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GER12_RS15975 PF17962 Bacterial macroglobulin domain 6 GER12_RS15975 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GER12_RS15975 PF01835 MG2 domain GER12_RS15975 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GER12_RS15975 PF07703 Alpha-2-macroglobulin bait region domain GER12_RS15975 PF07678 A-macroglobulin TED domain GER12_RS15975 PF00207 Alpha-2-macroglobulin family GER12_RS15980 PF06832 Penicillin-Binding Protein C-terminus Family GER12_RS15980 PF00912 Transglycosylase GER12_RS15980 PF00905 Penicillin binding protein transpeptidase domain GER12_RS15985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS15985 PF01568 Molydopterin dinucleotide binding domain GER12_RS15985 PF00384 Molybdopterin oxidoreductase GER12_RS15990 PF13247 4Fe-4S dicluster domain GER12_RS15990 PF12800 4Fe-4S binding domain GER12_RS16005 PF00334 Nucleoside diphosphate kinase GER12_RS16010 PF04055 Radical SAM superfamily GER12_RS16015 PF13464 Domain of unknown function (DUF4115) GER12_RS16020 PF04551 GcpE protein GER12_RS16025 PF03129 Anticodon binding domain GER12_RS16025 PF13393 Histidyl-tRNA synthetase GER12_RS16030 PF09976 Tetratricopeptide repeat-like domain GER12_RS16035 PF13360 PQQ-like domain GER12_RS16040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GER12_RS16040 PF01926 50S ribosome-binding GTPase GER12_RS16045 PF07191 zinc-ribbons GER12_RS16050 PF01476 LysM domain GER12_RS16050 PF07979 Intimin C-type lectin domain GER12_RS16050 PF11924 Inverse autotransporter, beta-domain GER12_RS16050 PF02368 Bacterial Ig-like domain (group 2) GER12_RS16050 PF02369 Bacterial Ig-like domain (group 1) GER12_RS16070 PF03797 Autotransporter beta-domain GER12_RS16075 PF02601 Exonuclease VII, large subunit GER12_RS16075 PF13742 OB-fold nucleic acid binding domain GER12_RS16080 PF00478 IMP dehydrogenase / GMP reductase domain GER12_RS16080 PF00571 CBS domain GER12_RS16085 PF00117 Glutamine amidotransferase class-I GER12_RS16085 PF02540 NAD synthase GER12_RS16085 PF00958 GMP synthase C terminal domain GER12_RS16105 PF11119 Protein of unknown function (DUF2633) GER12_RS16115 PF00563 EAL domain GER12_RS16115 PF05231 MASE1 GER12_RS16120 PF02541 Ppx/GppA phosphatase family GER12_RS16125 PF17941 Polyphosphate kinase C-terminal domain 1 GER12_RS16125 PF13090 Polyphosphate kinase C-terminal domain 2 GER12_RS16125 PF02503 Polyphosphate kinase middle domain GER12_RS16125 PF13089 Polyphosphate kinase N-terminal domain GER12_RS16130 PF00551 Formyl transferase GER12_RS16135 PF02769 AIR synthase related protein, C-terminal domain GER12_RS16135 PF00586 AIR synthase related protein, N-terminal domain GER12_RS16145 PF00860 Permease family GER12_RS16150 PF00308 Bacterial dnaA protein GER12_RS16155 PF03960 ArsC family GER12_RS16160 PF01435 Peptidase family M48 GER12_RS16165 PF01594 AI-2E family transporter GER12_RS16170 PF13556 PucR C-terminal helix-turn-helix domain GER12_RS16170 PF17853 GGDEF-like domain GER12_RS16170 PF05651 Putative sugar diacid recognition GER12_RS16175 PF02447 GntP family permease GER12_RS16180 PF02595 Glycerate kinase family GER12_RS16185 PF00578 AhpC/TSA family GER12_RS16190 PF01842 ACT domain GER12_RS16195 PF00701 Dihydrodipicolinate synthetase family GER12_RS16200 PF06804 NlpB/DapX lipoprotein GER12_RS16205 PF01259 SAICAR synthetase GER12_RS16210 PF04228 Putative neutral zinc metallopeptidase GER12_RS16215 PF13718 GNAT acetyltransferase 2 GER12_RS16215 PF17176 tRNA-binding domain GER12_RS16215 PF05127 Helicase GER12_RS16215 PF08351 Domain of unknown function (DUF1726) GER12_RS16220 PF13980 Uncharacterised protein family (UPF0370) GER12_RS16225 PF01546 Peptidase family M20/M25/M40 GER12_RS16225 PF07687 Peptidase dimerisation domain GER12_RS16230 PF03960 ArsC family GER12_RS16240 PF00873 AcrB/AcrD/AcrF family GER12_RS16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS16245 PF00672 HAMP domain GER12_RS16245 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GER12_RS16245 PF07730 Histidine kinase GER12_RS16250 PF13247 4Fe-4S dicluster domain GER12_RS16250 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS16250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GER12_RS16255 PF00144 Beta-lactamase GER12_RS16260 PF00293 NUDIX domain GER12_RS16265 PF06674 Protein of unknown function (DUF1176) GER12_RS16275 PF00456 Transketolase, thiamine diphosphate binding domain GER12_RS16275 PF02780 Transketolase, C-terminal domain GER12_RS16275 PF02779 Transketolase, pyrimidine binding domain GER12_RS16280 PF00923 Transaldolase/Fructose-6-phosphate aldolase GER12_RS16285 PF00390 Malic enzyme, N-terminal domain GER12_RS16285 PF01515 Phosphate acetyl/butaryl transferase GER12_RS16285 PF03949 Malic enzyme, NAD binding domain GER12_RS16290 PF00936 BMC domain GER12_RS16295 PF10662 Ethanolamine utilisation - propanediol utilisation GER12_RS16300 PF06249 Ethanolamine utilisation protein EutQ GER12_RS16305 PF01923 Cobalamin adenosyltransferase GER12_RS16310 PF01515 Phosphate acetyl/butaryl transferase GER12_RS16315 PF00936 BMC domain GER12_RS16320 PF03319 Ethanolamine utilisation protein EutN/carboxysome GER12_RS16325 PF00171 Aldehyde dehydrogenase family GER12_RS16335 PF00465 Iron-containing alcohol dehydrogenase GER12_RS16340 PF04346 Ethanolamine utilisation protein, EutH GER12_RS16345 PF06277 Ethanolamine utilisation protein EutA GER12_RS16350 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GER12_RS16355 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GER12_RS16360 PF00936 BMC domain GER12_RS16365 PF00936 BMC domain GER12_RS16365 PF16365 Ethanolamine utilization protein EutK C-terminus GER12_RS16370 PF12833 Helix-turn-helix domain GER12_RS16375 PF09234 Domain of unknown function (DUF1963) GER12_RS16385 PF01218 Coproporphyrinogen III oxidase GER12_RS16390 PF01520 N-acetylmuramoyl-L-alanine amidase GER12_RS16395 PF00583 Acetyltransferase (GNAT) family GER12_RS16400 PF11143 Protein of unknown function (DUF2919) GER12_RS16405 PF06572 Protein of unknown function (DUF1131) GER12_RS16410 PF04261 Dyp-type peroxidase family GER12_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS16435 PF00005 ABC transporter GER12_RS16440 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS16445 PF00912 Transglycosylase GER12_RS16450 PF17263 Family of unknown function (DUF5329) GER12_RS16455 PF00117 Glutamine amidotransferase class-I GER12_RS16460 PF00155 Aminotransferase class I and II GER12_RS16460 PF00392 Bacterial regulatory proteins, gntR family GER12_RS16465 PF08543 Phosphomethylpyrimidine kinase GER12_RS16475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GER12_RS16480 PF05524 PEP-utilising enzyme, N-terminal GER12_RS16480 PF00391 PEP-utilising enzyme, mobile domain GER12_RS16480 PF02896 PEP-utilising enzyme, TIM barrel domain GER12_RS16485 PF00381 PTS HPr component phosphorylation site GER12_RS16490 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS16500 PF04354 ZipA, C-terminal FtsZ-binding domain GER12_RS16505 PF00533 BRCA1 C Terminus (BRCT) domain GER12_RS16505 PF03120 NAD-dependent DNA ligase OB-fold domain GER12_RS16505 PF01653 NAD-dependent DNA ligase adenylation domain GER12_RS16505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GER12_RS16505 PF12826 Helix-hairpin-helix motif GER12_RS16510 PF12843 Putative quorum-sensing-regulated virulence factor GER12_RS16515 PF13593 SBF-like CPA transporter family (DUF4137) GER12_RS16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS16520 PF03466 LysR substrate binding domain GER12_RS16525 PF03502 Nucleoside-specific channel-forming protein, Tsx GER12_RS16530 PF03825 Nucleoside H+ symporter GER12_RS16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS16540 PF03466 LysR substrate binding domain GER12_RS16565 PF00749 tRNA synthetases class I (E and Q), catalytic domain GER12_RS16570 PF07037 Putative transcription regulator (DUF1323) GER12_RS16575 PF07037 Putative transcription regulator (DUF1323) GER12_RS16590 PF05231 MASE1 GER12_RS16590 PF00563 EAL domain GER12_RS16595 PF07662 Na+ dependent nucleoside transporter C-terminus GER12_RS16595 PF01773 Na+ dependent nucleoside transporter N-terminus GER12_RS16595 PF07670 Nucleoside recognition GER12_RS16600 PF01566 Natural resistance-associated macrophage protein GER12_RS16605 PF10697 Protein of unknown function (DUF2502) GER12_RS16610 PF00248 Aldo/keto reductase family GER12_RS16615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS16615 PF00205 Thiamine pyrophosphate enzyme, central domain GER12_RS16615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS16620 PF00654 Voltage gated chloride channel GER12_RS16625 PF02685 Glucokinase GER12_RS16630 PF00155 Aminotransferase class I and II GER12_RS16640 PF03279 Bacterial lipid A biosynthesis acyltransferase GER12_RS16645 PF10810 Protein of unknown function (DUF2545) GER12_RS16650 PF07690 Major Facilitator Superfamily GER12_RS16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS16660 PF00672 HAMP domain GER12_RS16660 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS16665 PF02954 Bacterial regulatory protein, Fis family GER12_RS16665 PF00072 Response regulator receiver domain GER12_RS16665 PF14532 Sigma-54 interaction domain GER12_RS16670 PF01278 Omptin family GER12_RS16680 PF01226 Formate/nitrite transporter GER12_RS16685 PF04333 MlaA lipoprotein GER12_RS16690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GER12_RS16695 PF04175 Protein of unknown function (DUF406) GER12_RS16700 PF02803 Thiolase, C-terminal domain GER12_RS16700 PF00108 Thiolase, N-terminal domain GER12_RS16705 PF00378 Enoyl-CoA hydratase/isomerase GER12_RS16705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GER12_RS16705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GER12_RS16710 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS16715 PF01713 Smr domain GER12_RS16720 PF05175 Methyltransferase small domain GER12_RS16725 PF01264 Chorismate synthase GER12_RS16730 PF03411 Penicillin-insensitive murein endopeptidase GER12_RS16735 PF01925 Sulfite exporter TauE/SafE GER12_RS16740 PF04315 Elongation factor P hydroxylase GER12_RS16745 PF08891 YfcL protein GER12_RS16750 PF01266 FAD dependent oxidoreductase GER12_RS16750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GER12_RS16755 PF02801 Beta-ketoacyl synthase, C-terminal domain GER12_RS16755 PF00109 Beta-ketoacyl synthase, N-terminal domain GER12_RS16760 PF02517 CPBP intramembrane metalloprotease GER12_RS16775 PF13693 Winged helix-turn-helix DNA-binding GER12_RS16785 PF07690 Major Facilitator Superfamily GER12_RS16795 PF11890 Domain of unknown function (DUF3410) GER12_RS16795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GER12_RS16795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GER12_RS16800 PF01118 Semialdehyde dehydrogenase, NAD binding domain GER12_RS16800 PF02774 Semialdehyde dehydrogenase, dimerisation domain GER12_RS16805 PF01416 tRNA pseudouridine synthase GER12_RS16810 PF09335 SNARE associated Golgi protein GER12_RS16815 PF17848 Acetyl-coA carboxylase zinc finger domain GER12_RS16815 PF01039 Carboxyl transferase domain GER12_RS16820 PF02875 Mur ligase family, glutamate ligase domain GER12_RS16820 PF08245 Mur ligase middle domain GER12_RS16825 PF05036 Sporulation related domain GER12_RS16830 PF02674 Colicin V production protein GER12_RS16835 PF00156 Phosphoribosyl transferase domain GER12_RS16840 PF00158 Sigma-54 interaction domain GER12_RS16840 PF02954 Bacterial regulatory protein, Fis family GER12_RS16840 PF13426 PAS domain GER12_RS16845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GER12_RS16845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GER12_RS16850 PF13520 Amino acid permease GER12_RS16855 PF01168 Alanine racemase, N-terminal domain GER12_RS16860 PF00324 Amino acid permease GER12_RS16865 PF02441 Flavoprotein GER12_RS16870 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS16875 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS16880 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS16885 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS16890 PF00005 ABC transporter GER12_RS16895 PF08338 Domain of unknown function (DUF1731) GER12_RS16895 PF01370 NAD dependent epimerase/dehydratase family GER12_RS16900 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS16900 PF00043 Glutathione S-transferase, C-terminal domain GER12_RS16905 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS16905 PF14834 Glutathione S-transferase, C-terminal domain GER12_RS16910 PF12850 Calcineurin-like phosphoesterase superfamily domain GER12_RS16915 PF00293 NUDIX domain GER12_RS16920 PF00356 Bacterial regulatory proteins, lacI family GER12_RS16925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS16935 PF03611 PTS system sugar-specific permease component GER12_RS16940 PF00456 Transketolase, thiamine diphosphate binding domain GER12_RS16945 PF02780 Transketolase, C-terminal domain GER12_RS16945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GER12_RS16945 PF02779 Transketolase, pyrimidine binding domain GER12_RS16950 PF03606 C4-dicarboxylate anaerobic carrier GER12_RS16955 PF07085 DRTGG domain GER12_RS16955 PF01515 Phosphate acetyl/butaryl transferase GER12_RS16960 PF00871 Acetokinase family GER12_RS16965 PF04217 Protein of unknown function, DUF412 GER12_RS16970 PF03887 YfbU domain GER12_RS16975 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS16980 PF03600 Citrate transporter GER12_RS16980 PF02080 TrkA-C domain GER12_RS16990 PF00155 Aminotransferase class I and II GER12_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS16995 PF03466 LysR substrate binding domain GER12_RS17005 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GER12_RS17010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GER12_RS17015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GER12_RS17015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GER12_RS17025 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GER12_RS17025 PF10531 SLBB domain GER12_RS17025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GER12_RS17030 PF00384 Molybdopterin oxidoreductase GER12_RS17030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GER12_RS17030 PF01568 Molydopterin dinucleotide binding domain GER12_RS17030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS17035 PF00146 NADH dehydrogenase GER12_RS17040 PF12838 4Fe-4S dicluster domain GER12_RS17045 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GER12_RS17050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GER12_RS17055 PF00361 Proton-conducting membrane transporter GER12_RS17055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GER12_RS17060 PF00361 Proton-conducting membrane transporter GER12_RS17065 PF00361 Proton-conducting membrane transporter GER12_RS17070 PF01584 CheW-like domain GER12_RS17070 PF00072 Response regulator receiver domain GER12_RS17075 PF12706 Beta-lactamase superfamily domain GER12_RS17080 PF13673 Acetyltransferase (GNAT) domain GER12_RS17085 PF05957 Bacterial protein of unknown function (DUF883) GER12_RS17090 PF00425 chorismate binding enzyme GER12_RS17095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GER12_RS17095 PF16582 Middle domain of thiamine pyrophosphate GER12_RS17095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS17100 PF12697 Alpha/beta hydrolase family GER12_RS17105 PF00378 Enoyl-CoA hydratase/isomerase GER12_RS17110 PF13378 Enolase C-terminal domain-like GER12_RS17115 PF13193 AMP-binding enzyme C-terminal domain GER12_RS17115 PF00501 AMP-binding enzyme GER12_RS17130 PF00892 EamA-like transporter family GER12_RS17135 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GER12_RS17140 PF01522 Polysaccharide deacetylase GER12_RS17145 PF01370 NAD dependent epimerase/dehydratase family GER12_RS17145 PF02911 Formyl transferase, C-terminal domain GER12_RS17145 PF00551 Formyl transferase GER12_RS17150 PF00535 Glycosyl transferase family 2 GER12_RS17155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GER12_RS17160 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS17165 PF00293 NUDIX domain GER12_RS17170 PF07437 YfaZ precursor GER12_RS17175 PF00994 Probable molybdopterin binding domain GER12_RS17180 PF01614 Bacterial transcriptional regulator GER12_RS17180 PF09339 IclR helix-turn-helix domain GER12_RS17185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS17185 PF13378 Enolase C-terminal domain-like GER12_RS17190 PF07690 Major Facilitator Superfamily GER12_RS17195 PF03328 HpcH/HpaI aldolase/citrate lyase family GER12_RS17200 PF00994 Probable molybdopterin binding domain GER12_RS17210 PF02754 Cysteine-rich domain GER12_RS17210 PF13183 4Fe-4S dicluster domain GER12_RS17215 PF00890 FAD binding domain GER12_RS17220 PF01266 FAD dependent oxidoreductase GER12_RS17220 PF04324 BFD-like [2Fe-2S] binding domain GER12_RS17225 PF07690 Major Facilitator Superfamily GER12_RS17230 PF03009 Glycerophosphoryl diester phosphodiesterase family GER12_RS17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS17235 PF03466 LysR substrate binding domain GER12_RS17240 PF07690 Major Facilitator Superfamily GER12_RS17245 PF00111 2Fe-2S iron-sulfur cluster binding domain GER12_RS17250 PF00268 Ribonucleotide reductase, small chain GER12_RS17255 PF02867 Ribonucleotide reductase, barrel domain GER12_RS17255 PF00317 Ribonucleotide reductase, all-alpha domain GER12_RS17255 PF03477 ATP cone domain GER12_RS17270 PF07690 Major Facilitator Superfamily GER12_RS17275 PF13378 Enolase C-terminal domain-like GER12_RS17275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS17280 PF03989 DNA gyrase C-terminal domain, beta-propeller GER12_RS17280 PF00521 DNA gyrase/topoisomerase IV, subunit A GER12_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS17285 PF00072 Response regulator receiver domain GER12_RS17285 PF09456 RcsC Alpha-Beta-Loop (ABL) GER12_RS17285 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS17290 PF00072 Response regulator receiver domain GER12_RS17290 PF00196 Bacterial regulatory proteins, luxR family GER12_RS17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS17295 PF01627 Hpt domain GER12_RS17295 PF16359 RcsD-ABL domain GER12_RS17300 PF00267 Gram-negative porin GER12_RS17305 PF02424 ApbE family GER12_RS17310 PF12833 Helix-turn-helix domain GER12_RS17310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GER12_RS17310 PF02805 Metal binding domain of Ada GER12_RS17310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GER12_RS17315 PF13532 2OG-Fe(II) oxygenase superfamily GER12_RS17320 PF00005 ABC transporter GER12_RS17325 PF03974 Ecotin GER12_RS17330 PF12800 4Fe-4S binding domain GER12_RS17330 PF00037 4Fe-4S binding domain GER12_RS17330 PF13187 4Fe-4S dicluster domain GER12_RS17335 PF03927 NapD protein GER12_RS17340 PF00384 Molybdopterin oxidoreductase GER12_RS17340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS17340 PF01568 Molydopterin dinucleotide binding domain GER12_RS17345 PF12800 4Fe-4S binding domain GER12_RS17345 PF12838 4Fe-4S dicluster domain GER12_RS17350 PF13237 4Fe-4S dicluster domain GER12_RS17350 PF12801 4Fe-4S binding domain GER12_RS17355 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GER12_RS17360 PF03264 NapC/NirT cytochrome c family, N-terminal region GER12_RS17365 PF00005 ABC transporter GER12_RS17370 PF03379 CcmB protein GER12_RS17375 PF01578 Cytochrome C assembly protein GER12_RS17380 PF04995 Heme exporter protein D (CcmD) GER12_RS17385 PF03100 CcmE GER12_RS17390 PF01578 Cytochrome C assembly protein GER12_RS17390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GER12_RS17395 PF08534 Redoxin GER12_RS17400 PF03918 Cytochrome C biogenesis protein GER12_RS17405 PF00196 Bacterial regulatory proteins, luxR family GER12_RS17405 PF00072 Response regulator receiver domain GER12_RS17425 PF03335 Phage tail fibre repeat GER12_RS17425 PF07484 Phage Tail Collar Domain GER12_RS17425 PF08400 Prophage tail fibre N-terminal GER12_RS17435 PF14496 C-terminal novel E3 ligase, LRR-interacting GER12_RS17435 PF12468 Type III secretion system leucine rich repeat protein GER12_RS17450 PF11893 Domain of unknown function (DUF3413) GER12_RS17450 PF00884 Sulfatase GER12_RS17455 PF07208 Protein of unknown function (DUF1414) GER12_RS17460 PF04245 37-kD nucleoid-associated bacterial protein GER12_RS17470 PF01386 Ribosomal L25p family GER12_RS17475 PF00271 Helicase conserved C-terminal domain GER12_RS17475 PF04851 Type III restriction enzyme, res subunit GER12_RS17480 PF00849 RNA pseudouridylate synthase GER12_RS17480 PF01479 S4 domain GER12_RS17485 PF07690 Major Facilitator Superfamily GER12_RS17490 PF13989 YejG-like protein GER12_RS17495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS17495 PF00005 ABC transporter GER12_RS17500 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS17500 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS17505 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS17510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS17515 PF12792 CSS motif domain associated with EAL GER12_RS17515 PF00563 EAL domain GER12_RS17520 PF00877 NlpC/P60 family GER12_RS17525 PF01569 PAP2 superfamily GER12_RS17530 PF07683 Cobalamin synthesis protein cobW C-terminal domain GER12_RS17530 PF02492 CobW/HypB/UreG, nucleotide-binding domain GER12_RS17535 PF01132 Elongation factor P (EF-P) OB domain GER12_RS17535 PF08207 Elongation factor P (EF-P) KOW-like domain GER12_RS17535 PF09285 Elongation factor P, C-terminal GER12_RS17540 PF03692 Putative zinc- or iron-chelating domain GER12_RS17555 PF07690 Major Facilitator Superfamily GER12_RS17560 PF00381 PTS HPr component phosphorylation site GER12_RS17560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS17565 PF00294 pfkB family carbohydrate kinase GER12_RS17570 PF02378 Phosphotransferase system, EIIC GER12_RS17570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS17575 PF01261 Xylose isomerase-like TIM barrel GER12_RS17580 PF03601 Conserved hypothetical protein 698 GER12_RS17585 PF03466 LysR substrate binding domain GER12_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS17590 PF00324 Amino acid permease GER12_RS17595 PF00593 TonB dependent receptor GER12_RS17595 PF07715 TonB-dependent Receptor Plug Domain GER12_RS17600 PF07690 Major Facilitator Superfamily GER12_RS17605 PF18429 Domain of unknown function (DUF5609) GER12_RS17610 PF03315 Serine dehydratase beta chain GER12_RS17610 PF03313 Serine dehydratase alpha chain GER12_RS17620 PF00756 Putative esterase GER12_RS17625 PF01227 GTP cyclohydrolase I GER12_RS17630 PF04235 Protein of unknown function (DUF418) GER12_RS17635 PF00356 Bacterial regulatory proteins, lacI family GER12_RS17640 PF13407 Periplasmic binding protein domain GER12_RS17645 PF00005 ABC transporter GER12_RS17650 PF02653 Branched-chain amino acid transport system / permease component GER12_RS17655 PF01180 Dihydroorotate dehydrogenase GER12_RS17660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GER12_RS17660 PF07992 Pyridine nucleotide-disulphide oxidoreductase GER12_RS17665 PF10808 Protein of unknown function (DUF2542) GER12_RS17670 PF02698 DUF218 domain GER12_RS17675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GER12_RS17675 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GER12_RS17680 PF04172 LrgB-like family GER12_RS17685 PF03788 LrgA family GER12_RS17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS17690 PF03466 LysR substrate binding domain GER12_RS17695 PF07690 Major Facilitator Superfamily GER12_RS17700 PF07883 Cupin domain GER12_RS17705 PF01557 Fumarylacetoacetate (FAA) hydrolase family GER12_RS17710 PF14497 Glutathione S-transferase, C-terminal domain GER12_RS17710 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS17715 PF01494 FAD binding domain GER12_RS17720 PF01207 Dihydrouridine synthase (Dus) GER12_RS17730 PF02321 Outer membrane efflux protein GER12_RS17740 PF09335 SNARE associated Golgi protein GER12_RS17745 PF04893 Yip1 domain GER12_RS17750 PF00768 D-alanyl-D-alanine carboxypeptidase GER12_RS17755 PF09330 D-lactate dehydrogenase, membrane binding GER12_RS17755 PF01565 FAD binding domain GER12_RS17760 PF14310 Fibronectin type III-like domain GER12_RS17760 PF00933 Glycosyl hydrolase family 3 N terminal domain GER12_RS17760 PF01915 Glycosyl hydrolase family 3 C-terminal domain GER12_RS17765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GER12_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS17775 PF00005 ABC transporter GER12_RS17780 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS17790 PF13411 MerR HTH family regulatory protein GER12_RS17795 PF07694 5TMR of 5TMR-LYT GER12_RS17795 PF06580 Histidine kinase GER12_RS17800 PF00072 Response regulator receiver domain GER12_RS17800 PF04397 LytTr DNA-binding domain GER12_RS17805 PF07308 Protein of unknown function (DUF1456) GER12_RS17815 PF06998 Protein of unknown function (DUF1307) GER12_RS17820 PF01588 Putative tRNA binding domain GER12_RS17820 PF09334 tRNA synthetases class I (M) GER12_RS17825 PF10609 NUBPL iron-transfer P-loop NTPase GER12_RS17840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GER12_RS17840 PF02753 Pili assembly chaperone PapD, C-terminal domain GER12_RS17845 PF00577 Outer membrane usher protein GER12_RS17845 PF13954 PapC N-terminal domain GER12_RS17845 PF13953 PapC C-terminal domain GER12_RS17850 PF00419 Fimbrial protein GER12_RS17855 PF11776 Nickel/cobalt transporter regulator GER12_RS17860 PF02110 Hydroxyethylthiazole kinase family GER12_RS17865 PF08543 Phosphomethylpyrimidine kinase GER12_RS17870 PF00392 Bacterial regulatory proteins, gntR family GER12_RS17870 PF07702 UTRA domain GER12_RS17875 PF00294 pfkB family carbohydrate kinase GER12_RS17880 PF03747 ADP-ribosylglycohydrolase GER12_RS17885 PF03825 Nucleoside H+ symporter GER12_RS17890 PF01791 DeoC/LacD family aldolase GER12_RS17895 PF00781 Diacylglycerol kinase catalytic domain GER12_RS17935 PF00486 Transcriptional regulatory protein, C terminal GER12_RS17935 PF00072 Response regulator receiver domain GER12_RS17940 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS17940 PF00672 HAMP domain GER12_RS17945 PF07690 Major Facilitator Superfamily GER12_RS17950 PF00873 AcrB/AcrD/AcrF family GER12_RS17955 PF00873 AcrB/AcrD/AcrF family GER12_RS17960 PF13533 Biotin-lipoyl like GER12_RS17970 PF00012 Hsp70 protein GER12_RS17975 PF00730 HhH-GPD superfamily base excision DNA repair protein GER12_RS17975 PF06029 AlkA N-terminal domain GER12_RS17980 PF08448 PAS fold GER12_RS17980 PF08447 PAS fold GER12_RS17980 PF00563 EAL domain GER12_RS17980 PF05231 MASE1 GER12_RS17980 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS17980 PF13426 PAS domain GER12_RS17985 PF00485 Phosphoribulokinase / Uridine kinase family GER12_RS17990 PF00692 dUTPase GER12_RS17995 PF05170 AsmA family GER12_RS18000 PF03471 Transporter associated domain GER12_RS18000 PF00571 CBS domain GER12_RS18000 PF03741 Integral membrane protein TerC family GER12_RS18005 PF02563 Polysaccharide biosynthesis/export protein GER12_RS18005 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GER12_RS18005 PF10531 SLBB domain GER12_RS18010 PF01451 Low molecular weight phosphotyrosine protein phosphatase GER12_RS18015 PF13807 G-rich domain on putative tyrosine kinase GER12_RS18015 PF02706 Chain length determinant protein GER12_RS18015 PF13614 AAA domain GER12_RS18020 PF00535 Glycosyl transferase family 2 GER12_RS18025 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS18030 PF13439 Glycosyltransferase Family 4 GER12_RS18030 PF00534 Glycosyl transferases group 1 GER12_RS18040 PF00535 Glycosyl transferase family 2 GER12_RS18045 PF00132 Bacterial transferase hexapeptide (six repeats) GER12_RS18050 PF16363 GDP-mannose 4,6 dehydratase GER12_RS18055 PF01370 NAD dependent epimerase/dehydratase family GER12_RS18060 PF00293 NUDIX domain GER12_RS18065 PF13579 Glycosyl transferase 4-like domain GER12_RS18065 PF00534 Glycosyl transferases group 1 GER12_RS18070 PF00483 Nucleotidyl transferase GER12_RS18070 PF01050 Mannose-6-phosphate isomerase GER12_RS18075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GER12_RS18075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GER12_RS18075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GER12_RS18075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GER12_RS18080 PF02397 Bacterial sugar transferase GER12_RS18090 PF04230 Polysaccharide pyruvyl transferase GER12_RS18095 PF13439 Glycosyltransferase Family 4 GER12_RS18095 PF00534 Glycosyl transferases group 1 GER12_RS18105 PF00483 Nucleotidyl transferase GER12_RS18110 PF16363 GDP-mannose 4,6 dehydratase GER12_RS18115 PF04321 RmlD substrate binding domain GER12_RS18120 PF00483 Nucleotidyl transferase GER12_RS18125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GER12_RS18145 PF00535 Glycosyl transferase family 2 GER12_RS18150 PF00483 Nucleotidyl transferase GER12_RS18150 PF01050 Mannose-6-phosphate isomerase GER12_RS18155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GER12_RS18155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GER12_RS18155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GER12_RS18155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GER12_RS18160 PF02397 Bacterial sugar transferase GER12_RS18170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GER12_RS18170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GER12_RS18175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GER12_RS18175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GER12_RS18180 PF02706 Chain length determinant protein GER12_RS18185 PF01502 Phosphoribosyl-AMP cyclohydrolase GER12_RS18185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GER12_RS18190 PF00977 Histidine biosynthesis protein GER12_RS18195 PF00977 Histidine biosynthesis protein GER12_RS18200 PF00117 Glutamine amidotransferase class-I GER12_RS18205 PF00475 Imidazoleglycerol-phosphate dehydratase GER12_RS18210 PF00155 Aminotransferase class I and II GER12_RS18215 PF00815 Histidinol dehydrogenase GER12_RS18220 PF01634 ATP phosphoribosyltransferase GER12_RS18220 PF08029 HisG, C-terminal domain GER12_RS18230 PF01370 NAD dependent epimerase/dehydratase family GER12_RS18235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS18235 PF03466 LysR substrate binding domain GER12_RS18245 PF13520 Amino acid permease GER12_RS18250 PF08411 Exonuclease C-terminal GER12_RS18250 PF00929 Exonuclease GER12_RS18255 PF13981 SopA-like central domain GER12_RS18255 PF13979 SopA-like catalytic domain GER12_RS18265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS18265 PF00384 Molybdopterin oxidoreductase GER12_RS18265 PF01568 Molydopterin dinucleotide binding domain GER12_RS18270 PF13247 4Fe-4S dicluster domain GER12_RS18270 PF12800 4Fe-4S binding domain GER12_RS18275 PF01292 Prokaryotic cytochrome b561 GER12_RS18280 PF07943 Penicillin-binding protein 5, C-terminal domain GER12_RS18280 PF00768 D-alanyl-D-alanine carboxypeptidase GER12_RS18285 PF06445 GyrI-like small molecule binding domain GER12_RS18290 PF04632 Fusaric acid resistance protein family GER12_RS18295 PF04363 Protein of unknown function (DUF496) GER12_RS18300 PF00288 GHMP kinases N terminal domain GER12_RS18305 PF00871 Acetokinase family GER12_RS18310 PF10662 Ethanolamine utilisation - propanediol utilisation GER12_RS18315 PF00936 BMC domain GER12_RS18325 PF10531 SLBB domain GER12_RS18325 PF13375 RnfC Barrel sandwich hybrid domain GER12_RS18325 PF13237 4Fe-4S dicluster domain GER12_RS18325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GER12_RS18330 PF00465 Iron-containing alcohol dehydrogenase GER12_RS18335 PF00171 Aldehyde dehydrogenase family GER12_RS18340 PF01923 Cobalamin adenosyltransferase GER12_RS18345 PF03319 Ethanolamine utilisation protein EutN/carboxysome GER12_RS18355 PF06130 Phosphate propanoyltransferase GER12_RS18360 PF00936 BMC domain GER12_RS18365 PF00936 BMC domain GER12_RS18375 PF18427 DD-reactivating factor swiveling domain GER12_RS18375 PF08841 Diol dehydratase reactivase ATPase-like domain GER12_RS18380 PF02287 Dehydratase small subunit GER12_RS18385 PF02288 Dehydratase medium subunit GER12_RS18390 PF02286 Dehydratase large subunit GER12_RS18395 PF00936 BMC domain GER12_RS18400 PF00936 BMC domain GER12_RS18405 PF00230 Major intrinsic protein GER12_RS18410 PF10114 Sensory domain found in PocR GER12_RS18410 PF12833 Helix-turn-helix domain GER12_RS18415 PF07685 CobB/CobQ-like glutamine amidotransferase domain GER12_RS18415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GER12_RS18420 PF03186 CobD/Cbib protein GER12_RS18425 PF02570 Precorrin-8X methylmutase GER12_RS18430 PF01888 CbiD GER12_RS18435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS18440 PF05175 Methyltransferase small domain GER12_RS18445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS18450 PF11761 Cobalamin biosynthesis central region GER12_RS18450 PF11760 Cobalamin synthesis G N-terminal GER12_RS18450 PF01890 Cobalamin synthesis G C-terminus GER12_RS18455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS18460 PF02571 Precorrin-6x reductase CbiJ/CobK GER12_RS18465 PF06180 Cobalt chelatase (CbiK) GER12_RS18470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GER12_RS18475 PF01891 Cobalt uptake substrate-specific transmembrane region GER12_RS18480 PF02553 Cobalt transport protein component CbiN GER12_RS18485 PF02361 Cobalt transport protein GER12_RS18490 PF00005 ABC transporter GER12_RS18495 PF07685 CobB/CobQ-like glutamine amidotransferase domain GER12_RS18500 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GER12_RS18505 PF02654 Cobalamin-5-phosphate synthase GER12_RS18510 PF02277 Phosphoribosyltransferase GER12_RS18515 PF03734 L,D-transpeptidase catalytic domain GER12_RS18515 PF17969 L,D-transpeptidase C-terminal domain GER12_RS18525 PF01022 Bacterial regulatory protein, arsR family GER12_RS18530 PF01451 Low molecular weight phosphotyrosine protein phosphatase GER12_RS18535 PF06953 Arsenical resistance operon trans-acting repressor ArsD GER12_RS18540 PF02374 Anion-transporting ATPase GER12_RS18545 PF01758 Sodium Bile acid symporter family GER12_RS18560 PF01554 MatE GER12_RS18570 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus GER12_RS18570 PF01048 Phosphorylase superfamily GER12_RS18630 PF13693 Winged helix-turn-helix DNA-binding GER12_RS18640 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GER12_RS18655 PF13356 Arm DNA-binding domain GER12_RS18655 PF00589 Phage integrase family GER12_RS18675 PF06167 Glucose-regulated metallo-peptidase M90 GER12_RS18690 PF00717 Peptidase S24-like GER12_RS18695 PF00817 impB/mucB/samB family GER12_RS18695 PF11799 impB/mucB/samB family C-terminal domain GER12_RS18695 PF13438 Domain of unknown function (DUF4113) GER12_RS18700 PF00313 'Cold-shock' DNA-binding domain GER12_RS18710 PF00267 Gram-negative porin GER12_RS18720 PF01966 HD domain GER12_RS18725 PF18284 DNA methylase N-terminal domain GER12_RS18725 PF00145 C-5 cytosine-specific DNA methylase GER12_RS18730 PF03852 DNA mismatch endonuclease Vsr GER12_RS18735 PF00892 EamA-like transporter family GER12_RS18740 PF05661 Protein of unknown function (DUF808) GER12_RS18745 PF09926 Uncharacterized small protein (DUF2158) GER12_RS18750 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS18750 PF17151 Periplasmic sensor domain GER12_RS18760 PF10733 Protein of unknown function (DUF2525) GER12_RS18765 PF10781 Dextransucrase DSRB GER12_RS18770 PF00196 Bacterial regulatory proteins, luxR family GER12_RS18775 PF01311 Bacterial export proteins, family 1 GER12_RS18780 PF01313 Bacterial export proteins, family 3 GER12_RS18785 PF00813 FliP family GER12_RS18790 PF04347 Flagellar biosynthesis protein, FliO GER12_RS18795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GER12_RS18795 PF16973 Flagellar motor switch protein FliN N-terminal GER12_RS18800 PF02154 Flagellar motor switch protein FliM GER12_RS18800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GER12_RS18805 PF03748 Flagellar basal body-associated protein FliL GER12_RS18810 PF02120 Flagellar hook-length control protein FliK GER12_RS18815 PF02050 Flagellar FliJ protein GER12_RS18820 PF18269 T3SS EscN ATPase C-terminal domain GER12_RS18820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS18825 PF02108 Flagellar assembly protein FliH GER12_RS18830 PF01706 FliG C-terminal domain GER12_RS18830 PF14842 FliG N-terminal domain GER12_RS18830 PF14841 FliG middle domain GER12_RS18835 PF08345 Flagellar M-ring protein C-terminal GER12_RS18835 PF01514 Secretory protein of YscJ/FliF family GER12_RS18840 PF02049 Flagellar hook-basal body complex protein FliE GER12_RS18850 PF01206 Sulfurtransferase TusA GER12_RS18855 PF04143 Sulphur transport GER12_RS18860 PF13987 YedD-like protein GER12_RS18865 PF02806 Alpha amylase, C-terminal all-beta domain GER12_RS18865 PF00128 Alpha amylase, catalytic domain GER12_RS18870 PF05400 Flagellar protein FliT GER12_RS18875 PF02561 Flagellar protein FliS GER12_RS18880 PF02465 Flagellar hook-associated protein 2 N-terminus GER12_RS18880 PF07195 Flagellar hook-associated protein 2 C-terminus GER12_RS18880 PF07196 Flagellin hook IN motif GER12_RS18885 PF08884 Flagellin D3 domain GER12_RS18885 PF00669 Bacterial flagellin N-terminal helical region GER12_RS18885 PF00700 Bacterial flagellin C-terminal helical region GER12_RS18895 PF04542 Sigma-70 region 2 GER12_RS18895 PF04545 Sigma-70, region 4 GER12_RS18895 PF04539 Sigma-70 region 3 GER12_RS18900 PF02899 Phage integrase, N-terminal SAM-like domain GER12_RS18910 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS18925 PF03472 Autoinducer binding domain GER12_RS18925 PF00196 Bacterial regulatory proteins, luxR family GER12_RS18930 PF10769 Protein of unknown function (DUF2594) GER12_RS18940 PF00196 Bacterial regulatory proteins, luxR family GER12_RS18940 PF00072 Response regulator receiver domain GER12_RS18945 PF01541 GIY-YIG catalytic domain GER12_RS18945 PF02151 UvrB/uvrC motif GER12_RS18945 PF08459 UvrC Helix-hairpin-helix N-terminal GER12_RS18950 PF01066 CDP-alcohol phosphatidyltransferase GER12_RS18985 PF03695 Uncharacterised protein family (UPF0149) GER12_RS18985 PF02810 SEC-C motif GER12_RS18990 PF03222 Tryptophan/tyrosine permease family GER12_RS18995 PF10678 Protein of unknown function (DUF2492) GER12_RS19000 PF00210 Ferritin-like domain GER12_RS19005 PF13992 YecR-like lipoprotein GER12_RS19015 PF00210 Ferritin-like domain GER12_RS19030 PF02358 Trehalose-phosphatase GER12_RS19035 PF00982 Glycosyltransferase family 20 GER12_RS19040 PF00582 Universal stress protein family GER12_RS19050 PF05247 Flagellar transcriptional activator (FlhD) GER12_RS19055 PF05280 Flagellar transcriptional activator (FlhC) GER12_RS19060 PF01618 MotA/TolQ/ExbB proton channel family GER12_RS19065 PF00691 OmpA family GER12_RS19065 PF13677 Membrane MotB of proton-channel complex MotA/MotB GER12_RS19070 PF02895 Signal transducing histidine kinase, homodimeric domain GER12_RS19070 PF09078 CheY binding GER12_RS19070 PF01584 CheW-like domain GER12_RS19070 PF01627 Hpt domain GER12_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS19075 PF01584 CheW-like domain GER12_RS19080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS19080 PF00672 HAMP domain GER12_RS19080 PF02203 Tar ligand binding domain homologue GER12_RS19085 PF01739 CheR methyltransferase, SAM binding domain GER12_RS19085 PF03705 CheR methyltransferase, all-alpha domain GER12_RS19090 PF01339 CheB methylesterase GER12_RS19090 PF00072 Response regulator receiver domain GER12_RS19095 PF00072 Response regulator receiver domain GER12_RS19100 PF04344 Chemotaxis phosphatase, CheZ GER12_RS19105 PF01312 FlhB HrpN YscU SpaS Family GER12_RS19110 PF00771 FHIPEP family GER12_RS19115 PF06366 Flagellar protein FlhE GER12_RS19120 PF07470 Glycosyl Hydrolase Family 88 GER12_RS19125 PF00905 Penicillin binding protein transpeptidase domain GER12_RS19125 PF03717 Penicillin-binding Protein dimerisation domain GER12_RS19130 PF00750 tRNA synthetases class I (R) GER12_RS19130 PF05746 DALR anticodon binding domain GER12_RS19130 PF03485 Arginyl tRNA synthetase N terminal domain GER12_RS19135 PF06185 YecM protein GER12_RS19140 PF03932 CutC family GER12_RS19145 PF08003 Protein of unknown function (DUF1698) GER12_RS19150 PF13649 Methyltransferase domain GER12_RS19155 PF01124 MAPEG family GER12_RS19160 PF01904 Protein of unknown function DUF72 GER12_RS19165 PF00857 Isochorismatase family GER12_RS19170 PF01336 OB-fold nucleic acid binding domain GER12_RS19170 PF00152 tRNA synthetases class II (D, K and N) GER12_RS19170 PF02938 GAD domain GER12_RS19175 PF00293 NUDIX domain GER12_RS19180 PF01709 Transcriptional regulator GER12_RS19185 PF02075 Crossover junction endodeoxyribonuclease RuvC GER12_RS19190 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family GER12_RS19200 PF07499 RuvA, C-terminal domain GER12_RS19200 PF01330 RuvA N terminal domain GER12_RS19205 PF05496 Holliday junction DNA helicase RuvB P-loop domain GER12_RS19205 PF05491 RuvB C-terminal winged helix domain GER12_RS19205 PF17864 RuvB AAA lid domain GER12_RS19210 PF00950 ABC 3 transport family GER12_RS19215 PF00005 ABC transporter GER12_RS19220 PF01297 Zinc-uptake complex component A periplasmic GER12_RS19225 PF01476 LysM domain GER12_RS19225 PF08525 Opacity-associated protein A N-terminal motif GER12_RS19225 PF01551 Peptidase family M23 GER12_RS19230 PF03279 Bacterial lipid A biosynthesis acyltransferase GER12_RS19235 PF00224 Pyruvate kinase, barrel domain GER12_RS19235 PF02887 Pyruvate kinase, alpha/beta domain GER12_RS19240 PF01380 SIS domain GER12_RS19240 PF01418 Helix-turn-helix domain, rpiR family GER12_RS19245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GER12_RS19245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GER12_RS19250 PF00920 Dehydratase family GER12_RS19255 PF01081 KDPG and KHG aldolase GER12_RS19260 PF02222 ATP-grasp domain GER12_RS19265 PF07130 YebG protein GER12_RS19270 PF13995 YebF-like protein GER12_RS19275 PF04391 Protein of unknown function (DUF533) GER12_RS19280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GER12_RS19280 PF00326 Prolyl oligopeptidase family GER12_RS19285 PF00929 Exonuclease GER12_RS19290 PF00795 Carbon-nitrogen hydrolase GER12_RS19295 PF06440 DNA polymerase III, theta subunit GER12_RS19300 PF04234 CopC domain GER12_RS19305 PF05425 Copper resistance protein D GER12_RS19310 PF10709 Protein of unknown function (DUF2511) GER12_RS19315 PF00589 Phage integrase family GER12_RS19315 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain GER12_RS19320 PF12684 PDDEXK-like domain of unknown function (DUF3799) GER12_RS19320 PF06630 Enterobacterial exodeoxyribonuclease VIII GER12_RS19330 PF10721 Protein of unknown function (DUF2514) GER12_RS19355 PF03335 Phage tail fibre repeat GER12_RS19355 PF07484 Phage Tail Collar Domain GER12_RS19370 PF02040 Arsenical pump membrane protein GER12_RS19390 PF00892 EamA-like transporter family GER12_RS19400 PF00872 Transposase, Mutator family GER12_RS19410 PF02824 TGS domain GER12_RS19410 PF03129 Anticodon binding domain GER12_RS19410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GER12_RS19410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GER12_RS19415 PF00583 Acetyltransferase (GNAT) family GER12_RS19425 PF07166 Protein of unknown function (DUF1398) GER12_RS19430 PF07487 SopE GEF domain GER12_RS19430 PF05364 Salmonella type III secretion SopE effector N-terminus GER12_RS19440 PF00149 Calcineurin-like phosphoesterase GER12_RS19445 PF07358 Protein of unknown function (DUF1482) GER12_RS19450 PF07351 Protein of unknown function (DUF1480) GER12_RS19455 PF01189 16S rRNA methyltransferase RsmB/F GER12_RS19455 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GER12_RS19455 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GER12_RS19460 PF02470 MlaD protein GER12_RS19465 PF04403 Paraquat-inducible protein A GER12_RS19470 PF13185 GAF domain GER12_RS19475 PF17516 ProQ C-terminal domain GER12_RS19475 PF04352 ProQ/FINO family GER12_RS19480 PF17804 Tail specific protease N-terminal domain GER12_RS19480 PF03572 Peptidase family S41 GER12_RS19480 PF11818 C-terminal domain of tail specific protease (DUF3340) GER12_RS19480 PF00595 PDZ domain GER12_RS19485 PF01435 Peptidase family M48 GER12_RS19490 PF07690 Major Facilitator Superfamily GER12_RS19495 PF09339 IclR helix-turn-helix domain GER12_RS19495 PF01614 Bacterial transcriptional regulator GER12_RS19500 PF13996 YobH-like protein GER12_RS19505 PF13998 MgrB protein GER12_RS19510 PF13974 YebO-like protein GER12_RS19515 PF10736 Protein of unknown function (DUF2627) GER12_RS19520 PF00313 'Cold-shock' DNA-binding domain GER12_RS19525 PF03717 Penicillin-binding Protein dimerisation domain GER12_RS19525 PF00905 Penicillin binding protein transpeptidase domain GER12_RS19530 PF13847 Methyltransferase domain GER12_RS19535 PF02659 Putative manganese efflux pump GER12_RS19540 PF06173 Protein of unknown function (DUF986) GER12_RS19545 PF03613 PTS system mannose/fructose/sorbose family IID component GER12_RS19550 PF03609 PTS system sorbose-specific iic component GER12_RS19555 PF03830 PTS system sorbose subfamily IIB component GER12_RS19555 PF03610 PTS system fructose IIA component GER12_RS19560 PF03741 Integral membrane protein TerC family GER12_RS19560 PF03471 Transporter associated domain GER12_RS19565 PF00563 EAL domain GER12_RS19565 PF12792 CSS motif domain associated with EAL GER12_RS19570 PF03313 Serine dehydratase alpha chain GER12_RS19570 PF03315 Serine dehydratase beta chain GER12_RS19575 PF00293 NUDIX domain GER12_RS19580 PF04715 Anthranilate synthase component I, N terminal region GER12_RS19580 PF00425 chorismate binding enzyme GER12_RS19585 PF03701 Uncharacterised protein family (UPF0181) GER12_RS19590 PF01042 Endoribonuclease L-PSP GER12_RS19595 PF13307 Helicase C-terminal domain GER12_RS19595 PF04851 Type III restriction enzyme, res subunit GER12_RS19600 PF00814 Glycoprotease family GER12_RS19605 PF03843 Outer membrane lipoprotein Slp family GER12_RS19610 PF13193 AMP-binding enzyme C-terminal domain GER12_RS19610 PF00501 AMP-binding enzyme GER12_RS19615 PF01612 3'-5' exonuclease GER12_RS19615 PF00570 HRDC domain GER12_RS19620 PF03776 Septum formation topological specificity factor MinE GER12_RS19625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GER12_RS19630 PF03775 Septum formation inhibitor MinC, C-terminal domain GER12_RS19630 PF05209 Septum formation inhibitor MinC, N-terminal domain GER12_RS19635 PF05166 YcgL domain GER12_RS19640 PF01557 Fumarylacetoacetate (FAA) hydrolase family GER12_RS19645 PF03692 Putative zinc- or iron-chelating domain GER12_RS19655 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system GER12_RS19665 PF02600 Disulfide bond formation protein DsbB GER12_RS19670 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GER12_RS19675 PF07840 FadR C-terminal domain GER12_RS19675 PF00392 Bacterial regulatory proteins, gntR family GER12_RS19680 PF04293 SpoVR like protein GER12_RS19685 PF01266 FAD dependent oxidoreductase GER12_RS19690 PF00842 Alanine racemase, C-terminal domain GER12_RS19690 PF01168 Alanine racemase, N-terminal domain GER12_RS19695 PF00999 Sodium/hydrogen exchanger family GER12_RS19695 PF03471 Transporter associated domain GER12_RS19695 PF02080 TrkA-C domain GER12_RS19700 PF02016 LD-carboxypeptidase N-terminal domain GER12_RS19700 PF17676 LD-carboxypeptidase C-terminal domain GER12_RS19705 PF01464 Transglycosylase SLT domain GER12_RS19710 PF07238 PilZ domain GER12_RS19710 PF07317 Flagellar regulator YcgR GER12_RS19715 PF04226 Transglycosylase associated protein GER12_RS19720 PF01204 Trehalase GER12_RS19725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GER12_RS19725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GER12_RS19730 PF08173 Membrane bound YbgT-like protein GER12_RS19735 PF02322 Cytochrome bd terminal oxidase subunit II GER12_RS19740 PF01654 Cytochrome bd terminal oxidase subunit I GER12_RS19745 PF04809 HupH hydrogenase expression protein, C-terminal conserved region GER12_RS19750 PF07449 Hydrogenase-1 expression protein HyaE GER12_RS19755 PF01750 Hydrogenase maturation protease GER12_RS19760 PF01292 Prokaryotic cytochrome b561 GER12_RS19765 PF00374 Nickel-dependent hydrogenase GER12_RS19770 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GER12_RS19770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GER12_RS19790 PF06071 Protein of unknown function (DUF933) GER12_RS19790 PF01926 50S ribosome-binding GTPase GER12_RS19795 PF01195 Peptidyl-tRNA hydrolase GER12_RS19800 PF10762 Protein of unknown function (DUF2583) GER12_RS19805 PF00916 Sulfate permease family GER12_RS19805 PF01740 STAS domain GER12_RS19810 PF14572 Phosphoribosyl synthetase-associated domain GER12_RS19810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GER12_RS19815 PF08544 GHMP kinases C terminal GER12_RS19815 PF00288 GHMP kinases N terminal domain GER12_RS19820 PF03550 Outer membrane lipoprotein LolB GER12_RS19825 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GER12_RS19825 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GER12_RS19825 PF01488 Shikimate / quinate 5-dehydrogenase GER12_RS19830 PF00472 RF-1 domain GER12_RS19830 PF03462 PCRF domain GER12_RS19835 PF13847 Methyltransferase domain GER12_RS19835 PF17827 PrmC N-terminal domain GER12_RS19840 PF04247 Invasion gene expression up-regulator, SirB GER12_RS19845 PF13369 Transglutaminase-like superfamily GER12_RS19850 PF00793 DAHP synthetase I family GER12_RS19855 PF01699 Sodium/calcium exchanger protein GER12_RS19860 PF06150 ChaB GER12_RS19865 PF02635 DsrE/DsrF-like family GER12_RS19870 PF11924 Inverse autotransporter, beta-domain GER12_RS19875 PF00072 Response regulator receiver domain GER12_RS19875 PF00196 Bacterial regulatory proteins, luxR family GER12_RS19880 PF00672 HAMP domain GER12_RS19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS19880 PF07730 Histidine kinase GER12_RS19880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GER12_RS19885 PF07690 Major Facilitator Superfamily GER12_RS19890 PF00384 Molybdopterin oxidoreductase GER12_RS19890 PF01568 Molydopterin dinucleotide binding domain GER12_RS19890 PF14710 Respiratory nitrate reductase alpha N-terminal GER12_RS19895 PF14711 Respiratory nitrate reductase beta C-terminal GER12_RS19895 PF13247 4Fe-4S dicluster domain GER12_RS19900 PF02613 Nitrate reductase delta subunit GER12_RS19905 PF02665 Nitrate reductase gamma subunit GER12_RS19935 PF00551 Formyl transferase GER12_RS19935 PF01842 ACT domain GER12_RS19940 PF02810 SEC-C motif GER12_RS19945 PF01734 Patatin-like phospholipase GER12_RS19950 PF00072 Response regulator receiver domain GER12_RS19955 PF00483 Nucleotidyl transferase GER12_RS19960 PF00816 H-NS histone family GER12_RS19965 PF00265 Thymidine kinase GER12_RS19970 PF00171 Aldehyde dehydrogenase family GER12_RS19970 PF00465 Iron-containing alcohol dehydrogenase GER12_RS19975 PF01914 MarC family integral membrane protein GER12_RS19980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS19985 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS19990 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS19990 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS19995 PF00005 ABC transporter GER12_RS19995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS20000 PF00005 ABC transporter GER12_RS20000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS20005 PF00027 Cyclic nucleotide-binding domain GER12_RS20005 PF00520 Ion transport protein GER12_RS20010 PF04269 Protein of unknown function, DUF440 GER12_RS20015 PF13396 Phospholipase_D-nuclease N-terminal GER12_RS20015 PF13091 PLD-like domain GER12_RS20025 PF03795 YCII-related domain GER12_RS20030 PF03544 Gram-negative bacterial TonB protein C-terminal GER12_RS20035 PF03061 Thioesterase superfamily GER12_RS20040 PF04279 Intracellular septation protein A GER12_RS20050 PF03692 Putative zinc- or iron-chelating domain GER12_RS20055 PF03922 OmpW family GER12_RS20060 PF05067 Manganese containing catalase GER12_RS20065 PF05974 Domain of unknown function (DUF892) GER12_RS20070 PF05974 Domain of unknown function (DUF892) GER12_RS20075 PF10685 Stress-induced bacterial acidophilic repeat motif GER12_RS20080 PF00290 Tryptophan synthase alpha chain GER12_RS20085 PF00291 Pyridoxal-phosphate dependent enzyme GER12_RS20090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GER12_RS20090 PF00218 Indole-3-glycerol phosphate synthase GER12_RS20095 PF00117 Glutamine amidotransferase class-I GER12_RS20095 PF02885 Glycosyl transferase family, helical bundle domain GER12_RS20095 PF00591 Glycosyl transferase family, a/b domain GER12_RS20100 PF00425 chorismate binding enzyme GER12_RS20100 PF04715 Anthranilate synthase component I, N terminal region GER12_RS20105 PF08255 Trp-operon Leader Peptide GER12_RS20110 PF02811 PHP domain GER12_RS20115 PF01300 Telomere recombination GER12_RS20120 PF01479 S4 domain GER12_RS20120 PF00849 RNA pseudouridylate synthase GER12_RS20125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GER12_RS20130 PF00106 short chain dehydrogenase GER12_RS20135 PF08496 Peptidase family S49 N-terminal GER12_RS20135 PF01343 Peptidase family S49 GER12_RS20140 PF10692 Protein of unknown function (DUF2498) GER12_RS20145 PF08272 Topoisomerase I zinc-ribbon-like GER12_RS20145 PF01131 DNA topoisomerase GER12_RS20145 PF01751 Toprim domain GER12_RS20145 PF01396 Topoisomerase DNA binding C4 zinc finger GER12_RS20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS20150 PF03466 LysR substrate binding domain GER12_RS20165 PF00694 Aconitase C-terminal domain GER12_RS20165 PF00330 Aconitase family (aconitate hydratase) GER12_RS20170 PF00925 GTP cyclohydrolase II GER12_RS20175 PF01569 PAP2 superfamily GER12_RS20180 PF06305 Lipopolysaccharide assembly protein A domain GER12_RS20185 PF18073 Rubredoxin metal binding domain GER12_RS20190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GER12_RS20195 PF01253 Translation initiation factor SUI1 GER12_RS20200 PF05433 Glycine zipper 2TM domain GER12_RS20205 PF08220 DeoR-like helix-turn-helix domain GER12_RS20205 PF00455 DeoR C terminal sensor domain GER12_RS20215 PF13426 PAS domain GER12_RS20215 PF00990 Diguanylate cyclase, GGDEF domain GER12_RS20215 PF00563 EAL domain GER12_RS20220 PF17876 Cold shock domain GER12_RS20220 PF00773 RNB domain GER12_RS20220 PF08206 Ribonuclease B OB domain GER12_RS20220 PF00575 S1 RNA binding domain GER12_RS20255 PF00005 ABC transporter GER12_RS20260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GER12_RS20260 PF00005 ABC transporter GER12_RS20265 PF12911 N-terminal TM domain of oligopeptide transport permease C GER12_RS20265 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS20270 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS20275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS20280 PF00158 Sigma-54 interaction domain GER12_RS20280 PF02954 Bacterial regulatory protein, Fis family GER12_RS20285 PF04012 PspA/IM30 family GER12_RS20290 PF06667 Phage shock protein B GER12_RS20295 PF04024 PspC domain GER12_RS20300 PF09584 Phage shock protein PspD (Phageshock_PspD) GER12_RS20305 PF00581 Rhodanese-like domain GER12_RS20310 PF04317 YcjX-like family, DUF463 GER12_RS20315 PF05128 Domain of unknown function (DUF697) GER12_RS20320 PF18024 Helix-turn-helix domain GER12_RS20320 PF00158 Sigma-54 interaction domain GER12_RS20325 PF08534 Redoxin GER12_RS20330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS20330 PF13378 Enolase C-terminal domain-like GER12_RS20335 PF00246 Zinc carboxypeptidase GER12_RS20340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GER12_RS20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS20350 PF03466 LysR substrate binding domain GER12_RS20355 PF00248 Aldo/keto reductase family GER12_RS20365 PF00440 Bacterial regulatory proteins, tetR family GER12_RS20380 PF06445 GyrI-like small molecule binding domain GER12_RS20380 PF12833 Helix-turn-helix domain GER12_RS20400 PF08534 Redoxin GER12_RS20420 PF00924 Mechanosensitive ion channel GER12_RS20425 PF10749 Protein of unknown function (DUF2534) GER12_RS20430 PF00582 Universal stress protein family GER12_RS20435 PF13545 Crp-like helix-turn-helix domain GER12_RS20435 PF00027 Cyclic nucleotide-binding domain GER12_RS20440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GER12_RS20440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GER12_RS20445 PF01713 Smr domain GER12_RS20450 PF00672 HAMP domain GER12_RS20450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS20450 PF02203 Tar ligand binding domain homologue GER12_RS20455 PF01544 CorA-like Mg2+ transporter protein GER12_RS20460 PF00270 DEAD/DEAH box helicase GER12_RS20460 PF03880 DbpA RNA binding domain GER12_RS20460 PF00271 Helicase conserved C-terminal domain GER12_RS20465 PF01171 PP-loop family GER12_RS20475 PF00893 Small Multidrug Resistance protein GER12_RS20480 PF00582 Universal stress protein family GER12_RS20485 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GER12_RS20485 PF10371 Domain of unknown function GER12_RS20485 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GER12_RS20485 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GER12_RS20485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GER12_RS20495 PF03891 Domain of unknown function (DUF333) GER12_RS20500 PF03724 META domain GER12_RS20505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GER12_RS20505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GER12_RS20510 PF11739 Dicarboxylate transport GER12_RS20515 PF13617 YnbE-like lipoprotein GER12_RS20520 PF07027 Protein of unknown function (DUF1318) GER12_RS20530 PF02525 Flavodoxin-like fold GER12_RS20535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GER12_RS20535 PF00271 Helicase conserved C-terminal domain GER12_RS20535 PF04408 Helicase associated domain (HA2) GER12_RS20535 PF11898 Domain of unknown function (DUF3418) GER12_RS20535 PF00270 DEAD/DEAH box helicase GER12_RS20540 PF02698 DUF218 domain GER12_RS20545 PF01292 Prokaryotic cytochrome b561 GER12_RS20550 PF08242 Methyltransferase domain GER12_RS20560 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS20565 PF00005 ABC transporter GER12_RS20570 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS20575 PF00497 Bacterial extracellular solute-binding proteins, family 3 GER12_RS20585 PF06767 Sif protein GER12_RS20585 PF00657 GDSL-like Lipase/Acylhydrolase GER12_RS20600 PF02583 Metal-sensitive transcriptional repressor GER12_RS20605 PF00107 Zinc-binding dehydrogenase GER12_RS20605 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS20610 PF02203 Tar ligand binding domain homologue GER12_RS20610 PF00672 HAMP domain GER12_RS20610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GER12_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS20615 PF03466 LysR substrate binding domain GER12_RS20620 PF07063 Domain of unknown function (DUF1338) GER12_RS20625 PF00135 Carboxylesterase family GER12_RS20630 PF04349 Periplasmic glucan biosynthesis protein, MdoG GER12_RS20635 PF04264 YceI-like domain GER12_RS20640 PF01070 FMN-dependent dehydrogenase GER12_RS20645 PF00583 Acetyltransferase (GNAT) family GER12_RS20650 PF00455 DeoR C terminal sensor domain GER12_RS20650 PF08220 DeoR-like helix-turn-helix domain GER12_RS20655 PF00834 Ribulose-phosphate 3 epimerase family GER12_RS20660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GER12_RS20665 PF03437 BtpA family GER12_RS20670 PF03611 PTS system sugar-specific permease component GER12_RS20675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS20680 PF05343 M42 glutamyl aminopeptidase GER12_RS20685 PF13302 Acetyltransferase (GNAT) domain GER12_RS20690 PF18836 Beta solenoid repeat from YDCK GER12_RS20695 PF03595 Voltage-dependent anion channel GER12_RS20700 PF03848 Tellurite resistance protein TehB GER12_RS20705 PF11769 Protein of unknown function (DUF3313) GER12_RS20710 PF03594 Benzoate membrane transport protein GER12_RS20715 PF01381 Helix-turn-helix GER12_RS20715 PF07883 Cupin domain GER12_RS20720 PF01136 Peptidase family U32 GER12_RS20720 PF12392 Collagenase GER12_RS20725 PF10829 Protein of unknown function (DUF2554) GER12_RS20730 PF06767 Sif protein GER12_RS20745 PF01427 D-ala-D-ala dipeptidase GER12_RS20750 PF00392 Bacterial regulatory proteins, gntR family GER12_RS20750 PF00155 Aminotransferase class I and II GER12_RS20755 PF00171 Aldehyde dehydrogenase family GER12_RS20765 PF10753 Toxin GhoT_OrtT GER12_RS20785 PF10735 Protein of unknown function (DUF2526) GER12_RS20790 PF04657 Putative inner membrane exporter, YdcZ GER12_RS20800 PF16884 N-terminal domain of oxidoreductase GER12_RS20800 PF00107 Zinc-binding dehydrogenase GER12_RS20805 PF00392 Bacterial regulatory proteins, gntR family GER12_RS20805 PF07729 FCD domain GER12_RS20810 PF07715 TonB-dependent Receptor Plug Domain GER12_RS20810 PF00593 TonB dependent receptor GER12_RS20820 PF06004 Bacterial protein of unknown function (DUF903) GER12_RS20825 PF00324 Amino acid permease GER12_RS20835 PF00797 N-acetyltransferase GER12_RS20840 PF02567 Phenazine biosynthesis-like protein GER12_RS20845 PF02665 Nitrate reductase gamma subunit GER12_RS20850 PF02613 Nitrate reductase delta subunit GER12_RS20855 PF14711 Respiratory nitrate reductase beta C-terminal GER12_RS20855 PF13247 4Fe-4S dicluster domain GER12_RS20860 PF14710 Respiratory nitrate reductase alpha N-terminal GER12_RS20860 PF00384 Molybdopterin oxidoreductase GER12_RS20860 PF01568 Molydopterin dinucleotide binding domain GER12_RS20865 PF07690 Major Facilitator Superfamily GER12_RS20875 PF07690 Major Facilitator Superfamily GER12_RS20885 PF00267 Gram-negative porin GER12_RS20890 PF00892 EamA-like transporter family GER12_RS20900 PF09163 Formate dehydrogenase N, transmembrane GER12_RS20900 PF12800 4Fe-4S binding domain GER12_RS20900 PF13247 4Fe-4S dicluster domain GER12_RS20905 PF01292 Prokaryotic cytochrome b561 GER12_RS20910 PF00107 Zinc-binding dehydrogenase GER12_RS20910 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS20915 PF03949 Malic enzyme, NAD binding domain GER12_RS20915 PF00390 Malic enzyme, N-terminal domain GER12_RS20920 PF08136 30S ribosomal protein subunit S22 family GER12_RS20925 PF10684 Putative biofilm-dependent modulation protein GER12_RS20930 PF02566 OsmC-like protein GER12_RS20935 PF06411 HdeA/HdeB family GER12_RS20945 PF11941 Domain of unknown function (DUF3459) GER12_RS20945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GER12_RS20945 PF00128 Alpha amylase, catalytic domain GER12_RS20950 PF00128 Alpha amylase, catalytic domain GER12_RS20955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GER12_RS20955 PF00128 Alpha amylase, catalytic domain GER12_RS20960 PF00155 Aminotransferase class I and II GER12_RS20965 PF03553 Na+/H+ antiporter family GER12_RS20970 PF00356 Bacterial regulatory proteins, lacI family GER12_RS21020 PF02547 Queuosine biosynthesis protein GER12_RS21030 PF01494 FAD binding domain GER12_RS21035 PF07690 Major Facilitator Superfamily GER12_RS21045 PF07690 Major Facilitator Superfamily GER12_RS21050 PF00107 Zinc-binding dehydrogenase GER12_RS21050 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS21055 PF00392 Bacterial regulatory proteins, gntR family GER12_RS21055 PF07729 FCD domain GER12_RS21065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GER12_RS21065 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GER12_RS21070 PF00374 Nickel-dependent hydrogenase GER12_RS21075 PF01292 Prokaryotic cytochrome b561 GER12_RS21080 PF01750 Hydrogenase maturation protease GER12_RS21085 PF01455 HupF/HypC family GER12_RS21095 PF04809 HupH hydrogenase expression protein, C-terminal conserved region GER12_RS21105 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GER12_RS21110 PF00267 Gram-negative porin GER12_RS21120 PF01062 Bestrophin, RFP-TM, chloride channel GER12_RS21125 PF13811 Domain of unknown function (DUF4186) GER12_RS21130 PF04960 Glutaminase GER12_RS21135 PF00171 Aldehyde dehydrogenase family GER12_RS21140 PF03466 LysR substrate binding domain GER12_RS21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS21145 PF07690 Major Facilitator Superfamily GER12_RS21150 PF01914 MarC family integral membrane protein GER12_RS21155 PF01047 MarR family GER12_RS21160 PF12833 Helix-turn-helix domain GER12_RS21165 PF13999 MarB protein GER12_RS21170 PF00892 EamA-like transporter family GER12_RS21175 PF07690 Major Facilitator Superfamily GER12_RS21185 PF04076 Bacterial OB fold (BOF) protein GER12_RS21190 PF02464 Competence-damaged protein GER12_RS21195 PF10685 Stress-induced bacterial acidophilic repeat motif GER12_RS21200 PF01432 Peptidase family M3 GER12_RS21205 PF00106 short chain dehydrogenase GER12_RS21210 PF00392 Bacterial regulatory proteins, gntR family GER12_RS21210 PF07729 FCD domain GER12_RS21215 PF14001 YdfZ protein GER12_RS21220 PF08125 Mannitol dehydrogenase C-terminal domain GER12_RS21220 PF01232 Mannitol dehydrogenase Rossmann domain GER12_RS21225 PF00083 Sugar (and other) transporter GER12_RS21225 PF07690 Major Facilitator Superfamily GER12_RS21230 PF00107 Zinc-binding dehydrogenase GER12_RS21230 PF08240 Alcohol dehydrogenase GroES-like domain GER12_RS21235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GER12_RS21235 PF13378 Enolase C-terminal domain-like GER12_RS21240 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GER12_RS21245 PF06932 Protein of unknown function (DUF1283) GER12_RS21250 PF13302 Acetyltransferase (GNAT) domain GER12_RS21255 PF06788 Uncharacterised protein family (UPF0257) GER12_RS21260 PF06649 Protein of unknown function (DUF1161) GER12_RS21265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS21265 PF00384 Molybdopterin oxidoreductase GER12_RS21265 PF01568 Molydopterin dinucleotide binding domain GER12_RS21270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS21270 PF00384 Molybdopterin oxidoreductase GER12_RS21270 PF01568 Molydopterin dinucleotide binding domain GER12_RS21275 PF12800 4Fe-4S binding domain GER12_RS21275 PF13247 4Fe-4S dicluster domain GER12_RS21280 PF04976 DMSO reductase anchor subunit (DmsC) GER12_RS21285 PF02613 Nitrate reductase delta subunit GER12_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS21295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GER12_RS21300 PF00528 Binding-protein-dependent transport system inner membrane component GER12_RS21305 PF00571 CBS domain GER12_RS21305 PF00005 ABC transporter GER12_RS21310 PF00654 Voltage gated chloride channel GER12_RS21320 PF00480 ROK family GER12_RS21325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS21325 PF03466 LysR substrate binding domain GER12_RS21330 PF07690 Major Facilitator Superfamily GER12_RS21340 PF00089 Trypsin GER12_RS21345 PF00893 Small Multidrug Resistance protein GER12_RS21350 PF00893 Small Multidrug Resistance protein GER12_RS21355 PF01594 AI-2E family transporter GER12_RS21360 PF02233 NAD(P) transhydrogenase beta subunit GER12_RS21365 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GER12_RS21365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GER12_RS21365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GER12_RS21370 PF07338 Protein of unknown function (DUF1471) GER12_RS21375 PF13520 Amino acid permease GER12_RS21380 PF06942 GlpM protein GER12_RS21385 PF00072 Response regulator receiver domain GER12_RS21385 PF00486 Transcriptional regulatory protein, C terminal GER12_RS21395 PF00267 Gram-negative porin GER12_RS21400 PF13382 Adenine deaminase C-terminal domain GER12_RS21400 PF01979 Amidohydrolase family GER12_RS21405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS21405 PF00672 HAMP domain GER12_RS21405 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS21410 PF05472 DNA replication terminus site-binding protein (Ter protein) GER12_RS21415 PF10415 Fumarase C C-terminus GER12_RS21415 PF00206 Lyase GER12_RS21420 PF05681 Fumarate hydratase (Fumerase) GER12_RS21420 PF05683 Fumarase C-terminus GER12_RS21425 PF01238 Phosphomannose isomerase type I GER12_RS21430 PF06097 Bacterial protein of unknown function (DUF945) GER12_RS21440 PF00155 Aminotransferase class I and II GER12_RS21445 PF00962 Adenosine/AMP deaminase GER12_RS21450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GER12_RS21450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GER12_RS21460 PF05321 Haemolysin expression modulating protein GER12_RS21465 PF10754 Protein of unknown function (DUF2569) GER12_RS21470 PF02508 Rnf-Nqr subunit, membrane protein GER12_RS21475 PF04060 Putative Fe-S cluster GER12_RS21480 PF13375 RnfC Barrel sandwich hybrid domain GER12_RS21480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GER12_RS21480 PF12838 4Fe-4S dicluster domain GER12_RS21480 PF10531 SLBB domain GER12_RS21485 PF03116 NQR2, RnfD, RnfE family GER12_RS21490 PF04205 FMN-binding domain GER12_RS21495 PF02508 Rnf-Nqr subunit, membrane protein GER12_RS21500 PF00633 Helix-hairpin-helix motif GER12_RS21500 PF00730 HhH-GPD superfamily base excision DNA repair protein GER12_RS21500 PF10576 Iron-sulfur binding domain of endonuclease III GER12_RS21505 PF00854 POT family GER12_RS21510 PF02798 Glutathione S-transferase, N-terminal domain GER12_RS21510 PF00043 Glutathione S-transferase, C-terminal domain GER12_RS21515 PF08543 Phosphomethylpyrimidine kinase GER12_RS21520 PF01479 S4 domain GER12_RS21520 PF00579 tRNA synthetases class I (W and Y) GER12_RS21525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GER12_RS21525 PF01243 Pyridoxamine 5'-phosphate oxidase GER12_RS21530 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme GER12_RS21535 PF03702 Anhydro-N-acetylmuramic acid kinase GER12_RS21540 PF05433 Glycine zipper 2TM domain GER12_RS21545 PF01047 MarR family GER12_RS21550 PF07869 Protein of unknown function (DUF1656) GER12_RS21555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GER12_RS21555 PF00529 HlyD membrane-fusion protein of T1SS GER12_RS21560 PF04632 Fusaric acid resistance protein family GER12_RS21565 PF00080 Copper/zinc superoxide dismutase (SODC) GER12_RS21570 PF00248 Aldo/keto reductase family GER12_RS21575 PF06945 Protein of unknown function (DUF1289) GER12_RS21580 PF00440 Bacterial regulatory proteins, tetR family GER12_RS21580 PF16925 Tetracyclin repressor-like, C-terminal domain GER12_RS21585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GER12_RS21590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GER12_RS21595 PF00929 Exonuclease GER12_RS21600 PF00462 Glutaredoxin GER12_RS21605 PF00877 NlpC/P60 family GER12_RS21610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GER12_RS21610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GER12_RS21620 PF00356 Bacterial regulatory proteins, lacI family GER12_RS21625 PF03466 LysR substrate binding domain GER12_RS21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS21630 PF07690 Major Facilitator Superfamily GER12_RS21640 PF00677 Lumazine binding domain GER12_RS21645 PF01554 MatE GER12_RS21660 PF01312 FlhB HrpN YscU SpaS Family GER12_RS21665 PF01311 Bacterial export proteins, family 1 GER12_RS21670 PF01313 Bacterial export proteins, family 3 GER12_RS21675 PF00813 FliP family GER12_RS21680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GER12_RS21695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GER12_RS21695 PF18269 T3SS EscN ATPase C-terminal domain GER12_RS21700 PF00771 FHIPEP family GER12_RS21710 PF07201 HrpJ-like domain GER12_RS21725 PF01514 Secretory protein of YscJ/FliF family GER12_RS21765 PF05802 Enterobacterial EspB protein GER12_RS21770 PF04888 Secretion system effector C (SseC) like family GER12_RS21780 PF03433 EspA-like secreted protein GER12_RS21800 PF00263 Bacterial type II and III secretion system protein GER12_RS21800 PF03958 Bacterial type II/III secretion system short domain GER12_RS21810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS21810 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS21810 PF01627 Hpt domain GER12_RS21810 PF00072 Response regulator receiver domain GER12_RS21810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GER12_RS21810 PF00672 HAMP domain GER12_RS21815 PF00072 Response regulator receiver domain GER12_RS21815 PF00196 Bacterial regulatory proteins, luxR family GER12_RS21820 PF13411 MerR HTH family regulatory protein GER12_RS21825 PF08349 Protein of unknown function (DUF1722) GER12_RS21830 PF10965 Protein of unknown function (DUF2767) GER12_RS21835 PF00072 Response regulator receiver domain GER12_RS21835 PF00196 Bacterial regulatory proteins, luxR family GER12_RS21840 PF00512 His Kinase A (phospho-acceptor) domain GER12_RS21840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GER12_RS21845 PF13247 4Fe-4S dicluster domain GER12_RS21850 PF03916 Polysulphide reductase, NrfD GER12_RS21855 PF01568 Molydopterin dinucleotide binding domain GER12_RS21855 PF00384 Molybdopterin oxidoreductase GER12_RS21855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GER12_RS21860 PF00294 pfkB family carbohydrate kinase GER12_RS21870 PF00561 alpha/beta hydrolase fold GER12_RS21875 PF00324 Amino acid permease GER12_RS21880 PF02887 Pyruvate kinase, alpha/beta domain GER12_RS21880 PF00224 Pyruvate kinase, barrel domain GER12_RS21885 PF04728 Lipoprotein leucine-zipper GER12_RS21890 PF04728 Lipoprotein leucine-zipper GER12_RS21895 PF04728 Lipoprotein leucine-zipper GER12_RS21900 PF01476 LysM domain GER12_RS21900 PF03734 L,D-transpeptidase catalytic domain GER12_RS21900 PF17969 L,D-transpeptidase C-terminal domain GER12_RS21905 PF02657 Fe-S metabolism associated domain GER12_RS21910 PF00266 Aminotransferase class-V GER12_RS21915 PF01458 Uncharacterized protein family (UPF0051) GER12_RS21920 PF00005 ABC transporter GER12_RS21925 PF01458 Uncharacterized protein family (UPF0051) GER12_RS21930 PF01521 Iron-sulphur cluster biosynthesis GER12_RS21940 PF15930 Domain of unknown function GER12_RS21945 PF03061 Thioesterase superfamily GER12_RS21950 PF13183 4Fe-4S dicluster domain GER12_RS21950 PF01565 FAD binding domain GER12_RS21950 PF02913 FAD linked oxidases, C-terminal domain GER12_RS21955 PF01594 AI-2E family transporter GER12_RS21965 PF08965 Domain of unknown function (DUF1870) GER12_RS21970 PF07690 Major Facilitator Superfamily GER12_RS21975 PF07690 Major Facilitator Superfamily GER12_RS21980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GER12_RS21980 PF08501 Shikimate dehydrogenase substrate binding domain GER12_RS21985 PF01487 Type I 3-dehydroquinase GER12_RS21990 PF01144 Coenzyme A transferase GER12_RS21995 PF02770 Acyl-CoA dehydrogenase, middle domain GER12_RS21995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GER12_RS21995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GER12_RS22000 PF12833 Helix-turn-helix domain GER12_RS22000 PF02311 AraC-like ligand binding domain GER12_RS22005 PF01012 Electron transfer flavoprotein domain GER12_RS22010 PF00766 Electron transfer flavoprotein FAD-binding domain GER12_RS22010 PF01012 Electron transfer flavoprotein domain GER12_RS22015 PF01494 FAD binding domain GER12_RS22025 PF13193 AMP-binding enzyme C-terminal domain GER12_RS22025 PF00501 AMP-binding enzyme GER12_RS22030 PF02896 PEP-utilising enzyme, TIM barrel domain GER12_RS22030 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GER12_RS22030 PF00391 PEP-utilising enzyme, mobile domain GER12_RS22035 PF03618 Kinase/pyrophosphorylase GER12_RS22040 PF00793 DAHP synthetase I family GER12_RS22045 PF10636 Hemin uptake protein hemP GER12_RS22050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GER12_RS22055 PF00563 EAL domain GER12_RS22060 PF00877 NlpC/P60 family GER12_RS22065 PF00005 ABC transporter GER12_RS22070 PF00255 Glutathione peroxidase GER12_RS22075 PF01032 FecCD transport family GER12_RS22080 PF00216 Bacterial DNA-binding protein GER12_RS22085 PF03147 Ferredoxin-fold anticodon binding domain GER12_RS22085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GER12_RS22085 PF01588 Putative tRNA binding domain GER12_RS22085 PF03483 B3/4 domain GER12_RS22085 PF03484 tRNA synthetase B5 domain GER12_RS22090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GER12_RS22090 PF01409 tRNA synthetases class II core domain (F) GER12_RS22100 PF00453 Ribosomal protein L20 GER12_RS22105 PF01632 Ribosomal protein L35 GER12_RS22110 PF05198 Translation initiation factor IF-3, N-terminal domain GER12_RS22110 PF00707 Translation initiation factor IF-3, C-terminal domain GER12_RS22115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GER12_RS22115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GER12_RS22115 PF02824 TGS domain GER12_RS22115 PF03129 Anticodon binding domain GER12_RS22120 PF01223 DNA/RNA non-specific endonuclease GER12_RS22135 PF04338 Protein of unknown function, DUF481 GER12_RS22140 PF00294 pfkB family carbohydrate kinase GER12_RS22145 PF11080 Endoribonuclease GhoS GER12_RS22150 PF03881 Fructosamine kinase GER12_RS22155 PF14002 YniB-like protein GER12_RS22160 PF13419 Haloacid dehalogenase-like hydrolase GER12_RS22165 PF04307 LexA-binding, inner membrane-associated putative hydrolase GER12_RS22175 PF10729 Cell division activator CedA GER12_RS22180 PF00199 Catalase GER12_RS22180 PF06628 Catalase-related immune-responsive GER12_RS22180 PF18011 C-terminal domain found in long catalases GER12_RS22185 PF04794 YdjC-like protein GER12_RS22190 PF11975 Family 4 glycosyl hydrolase C-terminal domain GER12_RS22190 PF02056 Family 4 glycosyl hydrolase GER12_RS22195 PF07883 Cupin domain GER12_RS22195 PF12833 Helix-turn-helix domain GER12_RS22200 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GER12_RS22205 PF02378 Phosphotransferase system, EIIC GER12_RS22210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GER12_RS22215 PF04355 SmpA / OmlA family GER12_RS22220 PF02540 NAD synthase GER12_RS22230 PF07813 LTXXQ motif family protein GER12_RS22235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GER12_RS22240 PF04996 Succinylarginine dihydrolase GER12_RS22245 PF00171 Aldehyde dehydrogenase family GER12_RS22250 PF04958 Arginine N-succinyltransferase beta subunit GER12_RS22255 PF00202 Aminotransferase class-III GER12_RS22260 PF03372 Endonuclease/Exonuclease/phosphatase family GER12_RS22265 PF00293 NUDIX domain GER12_RS22270 PF07383 Protein of unknown function (DUF1496) GER12_RS22275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GER12_RS22275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GER12_RS22280 PF01131 DNA topoisomerase GER12_RS22280 PF01751 Toprim domain GER12_RS22285 PF02769 AIR synthase related protein, C-terminal domain GER12_RS22285 PF00586 AIR synthase related protein, N-terminal domain GER12_RS22290 PF00881 Nitroreductase family GER12_RS22295 PF01343 Peptidase family S49 GER12_RS22300 PF17763 Glutaminase/Asparaginase C-terminal domain GER12_RS22300 PF00710 Asparaginase, N-terminal GER12_RS22305 PF00857 Isochorismatase family GER12_RS22310 PF07023 Protein of unknown function (DUF1315) GER12_RS22315 PF01641 SelR domain GER12_RS22320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GER12_RS22320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GER12_RS22325 PF01263 Aldose 1-epimerase GER12_RS22330 PF00248 Aldo/keto reductase family GER12_RS22335 PF04055 Radical SAM superfamily GER12_RS22335 PF13186 Iron-sulfur cluster-binding domain GER12_RS22340 PF06629 MltA-interacting protein MipA GER12_RS22380 PF06122 Conjugative relaxosome accessory transposon protein GER12_RS22420 PF00589 Phage integrase family GER12_RS22420 PF02899 Phage integrase, N-terminal SAM-like domain GER12_RS22460 PF13610 DDE domain GER12_RS22470 PF00145 C-5 cytosine-specific DNA methylase GER12_RS22525 PF08535 KorB domain GER12_RS22525 PF02195 ParB-like nuclease domain GER12_RS22525 PF06613 KorB C-terminal beta-barrel domain GER12_RS22530 PF13614 AAA domain GER12_RS22550 PF00809 Pterin binding enzyme GER12_RS22555 PF01636 Phosphotransferase enzyme family GER12_RS22560 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase GER12_RS22575 PF02909 Tetracyclin repressor-like, C-terminal domain GER12_RS22575 PF00440 Bacterial regulatory proteins, tetR family GER12_RS22580 PF07690 Major Facilitator Superfamily GER12_RS22590 PF03466 LysR substrate binding domain GER12_RS22590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS22595 PF07690 Major Facilitator Superfamily GER12_RS22645 PF01024 Colicin pore forming domain GER12_RS22645 PF11504 Colicin Ia GER12_RS22650 PF03526 Colicin E1 (microcin) immunity protein GER12_RS22695 PF00589 Phage integrase family GER12_RS22710 PF06406 StbA protein GER12_RS22725 PF13007 Transposase C of IS166 homeodomain GER12_RS22725 PF13005 zinc-finger binding domain of transposase IS66 GER12_RS22725 PF03050 Transposase IS66 family GER12_RS22725 PF13817 IS66 C-terminal element GER12_RS22730 PF05717 IS66 Orf2 like protein GER12_RS22735 PF13276 HTH-like domain GER12_RS22735 PF01527 Transposase GER12_RS22735 PF00665 Integrase core domain GER12_RS22745 PF00717 Peptidase S24-like GER12_RS22750 PF06183 DinI-like family GER12_RS22755 PF06924 Protein of unknown function (DUF1281) GER12_RS22765 PF01555 DNA methylase GER12_RS22775 PF07128 Protein of unknown function (DUF1380) GER12_RS22785 PF07339 Protein of unknown function (DUF1472) GER12_RS22790 PF03230 Antirestriction protein GER12_RS22795 PF07128 Protein of unknown function (DUF1380) GER12_RS22810 PF00436 Single-strand binding protein family GER12_RS22815 PF06006 Bacterial protein of unknown function (DUF905) GER12_RS22820 PF02195 ParB-like nuclease domain GER12_RS22825 PF06290 Plasmid SOS inhibition protein (PsiB) GER12_RS22830 PF06952 PsiA protein GER12_RS22840 PF07339 Protein of unknown function (DUF1472) GER12_RS22860 PF04754 Putative transposase, YhgA-like GER12_RS22890 PF18821 Large polyvalent protein-associated domain 7 GER12_RS22890 PF03432 Relaxase/Mobilisation nuclease domain GER12_RS22915 PF00893 Small Multidrug Resistance protein GER12_RS22920 PF08212 Lipocalin-like domain GER12_RS22925 PF00144 Beta-lactamase GER12_RS22940 PF01848 Hok/gef family GER12_RS23055 PF00437 Type II/IV secretion system protein GER12_RS23070 PF00300 Histidine phosphatase superfamily (branch 1) GER12_RS23085 PF00589 Phage integrase family GER12_RS23090 PF04917 Bacterial shufflon protein, N-terminal constant region GER12_RS23095 PF04917 Bacterial shufflon protein, N-terminal constant region GER12_RS23105 PF01464 Transglycosylase SLT domain GER12_RS23120 PF00437 Type II/IV secretion system protein GER12_RS23135 PF07655 Secretin N-terminal domain GER12_RS23135 PF00263 Bacterial type II and III secretion system protein GER12_RS23185 PF02387 IncFII RepA protein family GER12_RS23195 PF14319 Transposase zinc-binding domain GER12_RS23195 PF04986 Putative transposase GER12_RS23205 PF00809 Pterin binding enzyme GER12_RS23210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GER12_RS23210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GER12_RS23210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GER12_RS23210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GER12_RS23230 PF02796 Helix-turn-helix domain of resolvase GER12_RS23230 PF00239 Resolvase, N terminal domain GER12_RS23240 PF13610 DDE domain GER12_RS23250 PF02796 Helix-turn-helix domain of resolvase GER12_RS23250 PF00239 Resolvase, N terminal domain GER12_RS23255 PF13700 Domain of unknown function (DUF4158) GER12_RS23255 PF01526 Tn3 transposase DDE domain GER12_RS23260 PF02371 Transposase IS116/IS110/IS902 family GER12_RS23260 PF01548 Transposase GER12_RS23270 PF03120 NAD-dependent DNA ligase OB-fold domain GER12_RS23270 PF01653 NAD-dependent DNA ligase adenylation domain GER12_RS23270 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GER12_RS23270 PF00533 BRCA1 C Terminus (BRCT) domain GER12_RS23270 PF12826 Helix-hairpin-helix motif GER12_RS23295 PF00809 Pterin binding enzyme GER12_RS23300 PF00893 Small Multidrug Resistance protein GER12_RS23305 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GER12_RS23310 PF03466 LysR substrate binding domain GER12_RS23310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GER12_RS23315 PF00144 Beta-lactamase GER12_RS23330 PF09584 Phage shock protein PspD (Phageshock_PspD) GER12_RS23335 PF04024 PspC domain GER12_RS23340 PF06667 Phage shock protein B GER12_RS23345 PF04012 PspA/IM30 family GER12_RS23350 PF00158 Sigma-54 interaction domain GER12_RS23350 PF02954 Bacterial regulatory protein, Fis family GER12_RS23355 PF13599 Pentapeptide repeats (9 copies) GER12_RS23365 PF13610 DDE domain GER12_RS23375 PF13427 Domain of unknown function (DUF4111) GER12_RS23375 PF01909 Nucleotidyltransferase domain GER12_RS23380 PF00589 Phage integrase family GER12_RS23380 PF13495 Phage integrase, N-terminal SAM-like domain GER12_RS23385 PF13610 DDE domain GER12_RS23395 PF01252 Signal peptidase (SPase) II GER12_RS23405 PF13411 MerR HTH family regulatory protein GER12_RS23415 PF13610 DDE domain GER12_RS23475 PF00216 Bacterial DNA-binding protein GER12_RS23480 PF00565 Staphylococcal nuclease homologue GER12_RS23525 PF01343 Peptidase family S49