locus-tag class description LFZ88_RS00005 PF08254 Threonine leader peptide LFZ88_RS00010 PF03447 Homoserine dehydrogenase, NAD binding domain LFZ88_RS00010 PF00742 Homoserine dehydrogenase LFZ88_RS00010 PF13840 ACT domain LFZ88_RS00010 PF01842 ACT domain LFZ88_RS00010 PF00696 Amino acid kinase family LFZ88_RS00015 PF08544 GHMP kinases C terminal LFZ88_RS00015 PF00288 GHMP kinases N terminal domain LFZ88_RS00020 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS00020 PF14821 Threonine synthase N terminus LFZ88_RS00025 PF03883 Peroxide stress protein YaaA LFZ88_RS00030 PF01235 Sodium:alanine symporter family LFZ88_RS00035 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ88_RS00040 PF00994 Probable molybdopterin binding domain LFZ88_RS00045 PF01184 GPR1/FUN34/yaaH family LFZ88_RS00050 PF03981 Ubiquinol-cytochrome C chaperone LFZ88_RS00050 PF13099 Domain of unknown function (DUF3944) LFZ88_RS00055 PF10807 Protein of unknown function (DUF2541) LFZ88_RS00060 PF00012 Hsp70 protein LFZ88_RS00065 PF00226 DnaJ domain LFZ88_RS00065 PF00684 DnaJ central domain LFZ88_RS00065 PF01556 DnaJ C terminal domain LFZ88_RS00070 PF03466 LysR substrate binding domain LFZ88_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS00090 PF00704 Glycosyl hydrolases family 18 LFZ88_RS00105 PF00419 Fimbrial protein LFZ88_RS00110 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS00110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS00115 PF00577 Outer membrane usher protein LFZ88_RS00115 PF13953 PapC C-terminal domain LFZ88_RS00115 PF13954 PapC N-terminal domain LFZ88_RS00120 PF00419 Fimbrial protein LFZ88_RS00125 PF00419 Fimbrial protein LFZ88_RS00130 PF16970 Type-1 fimbrial protein, A LFZ88_RS00135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS00135 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS00155 PF03466 LysR substrate binding domain LFZ88_RS00170 PF00149 Calcineurin-like phosphoesterase LFZ88_RS00170 PF02872 5'-nucleotidase, C-terminal domain LFZ88_RS00180 PF00884 Sulfatase LFZ88_RS00180 PF16385 Domain of unknown function LFZ88_RS00185 PF04055 Radical SAM superfamily LFZ88_RS00185 PF13186 Iron-sulfur cluster-binding domain LFZ88_RS00200 PF06965 Na+/H+ antiporter 1 LFZ88_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS00205 PF03466 LysR substrate binding domain LFZ88_RS00210 PF01055 Glycosyl hydrolases family 31 LFZ88_RS00220 PF01649 Ribosomal protein S20 LFZ88_RS00225 PF10837 Protein of unknown function (DUF2575) LFZ88_RS00230 PF06574 FAD synthetase LFZ88_RS00230 PF01687 Riboflavin kinase LFZ88_RS00235 PF08264 Anticodon-binding domain of tRNA LFZ88_RS00235 PF00133 tRNA synthetases class I (I, L, M and V) LFZ88_RS00235 PF06827 Zinc finger found in FPG and IleRS LFZ88_RS00240 PF01252 Signal peptidase (SPase) II LFZ88_RS00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ88_RS00250 PF02401 LytB protein LFZ88_RS00265 PF00072 Response regulator receiver domain LFZ88_RS00265 PF12431 Transcriptional regulator LFZ88_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS00270 PF17203 Single cache domain 3 LFZ88_RS00275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LFZ88_RS00280 PF02436 Conserved carboxylase domain LFZ88_RS00280 PF00682 HMGL-like LFZ88_RS00280 PF00364 Biotin-requiring enzyme LFZ88_RS00285 PF04277 Oxaloacetate decarboxylase, gamma chain LFZ88_RS00290 PF03390 2-hydroxycarboxylate transporter family LFZ88_RS00295 PF08218 Citrate lyase ligase C-terminal domain LFZ88_RS00295 PF00583 Acetyltransferase (GNAT) family LFZ88_RS00300 PF06857 Malonate decarboxylase delta subunit (MdcD) LFZ88_RS00305 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS00310 PF04223 Citrate lyase, alpha subunit (CitF) LFZ88_RS00315 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LFZ88_RS00320 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ88_RS00325 PF01113 Dihydrodipicolinate reductase, N-terminus LFZ88_RS00325 PF05173 Dihydrodipicolinate reductase, C-terminus LFZ88_RS00330 PF00117 Glutamine amidotransferase class-I LFZ88_RS00330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFZ88_RS00335 PF02142 MGS-like domain LFZ88_RS00335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFZ88_RS00335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFZ88_RS00340 PF07180 CaiF/GrlA transcriptional regulator LFZ88_RS00345 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS00350 PF00378 Enoyl-CoA hydratase/isomerase LFZ88_RS00355 PF00501 AMP-binding enzyme LFZ88_RS00355 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS00360 PF02515 CoA-transferase family III LFZ88_RS00365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ88_RS00365 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ88_RS00365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ88_RS00370 PF02028 BCCT, betaine/carnitine/choline family transporter LFZ88_RS00380 PF01012 Electron transfer flavoprotein domain LFZ88_RS00385 PF01012 Electron transfer flavoprotein domain LFZ88_RS00385 PF00766 Electron transfer flavoprotein FAD-binding domain LFZ88_RS00390 PF01494 FAD binding domain LFZ88_RS00400 PF00083 Sugar (and other) transporter LFZ88_RS00405 PF06004 Bacterial protein of unknown function (DUF903) LFZ88_RS00425 PF00884 Sulfatase LFZ88_RS00440 PF02525 Flavodoxin-like fold LFZ88_RS00445 PF02254 TrkA-N domain LFZ88_RS00445 PF00999 Sodium/hydrogen exchanger family LFZ88_RS00450 PF00186 Dihydrofolate reductase LFZ88_RS00455 PF00149 Calcineurin-like phosphoesterase LFZ88_RS00460 PF04379 ApaG domain LFZ88_RS00465 PF00398 Ribosomal RNA adenine dimethylase LFZ88_RS00470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFZ88_RS00475 PF00639 PPIC-type PPIASE domain LFZ88_RS00475 PF09312 SurA N-terminal domain LFZ88_RS00480 PF03968 OstA-like protein LFZ88_RS00480 PF04453 LPS transport system D LFZ88_RS00485 PF05099 Tellurite resistance protein TerB LFZ88_RS00485 PF00226 DnaJ domain LFZ88_RS00490 PF00849 RNA pseudouridylate synthase LFZ88_RS00495 PF00271 Helicase conserved C-terminal domain LFZ88_RS00495 PF18337 RapA N-terminal Tudor like domain LFZ88_RS00495 PF18339 RapA N-terminal Tudor like domain 1 LFZ88_RS00495 PF00176 SNF2 family N-terminal domain LFZ88_RS00495 PF12137 RNA polymerase recycling family C-terminal LFZ88_RS00500 PF00136 DNA polymerase family B LFZ88_RS00500 PF03104 DNA polymerase family B, exonuclease domain LFZ88_RS00520 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS00525 PF02610 L-arabinose isomerase LFZ88_RS00525 PF11762 L-arabinose isomerase C-terminal domain LFZ88_RS00530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS00535 PF12833 Helix-turn-helix domain LFZ88_RS00535 PF02311 AraC-like ligand binding domain LFZ88_RS00540 PF09335 SNARE associated Golgi protein LFZ88_RS00545 PF00005 ABC transporter LFZ88_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS00560 PF12793 Sugar transport-related sRNA regulator N-term LFZ88_RS00560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS00575 PF00694 Aconitase C-terminal domain LFZ88_RS00580 PF00330 Aconitase family (aconitate hydratase) LFZ88_RS00585 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ88_RS00590 PF08502 LeuA allosteric (dimerisation) domain LFZ88_RS00590 PF00682 HMGL-like LFZ88_RS00595 PF08054 Leucine operon leader peptide LFZ88_RS00600 PF03466 LysR substrate binding domain LFZ88_RS00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS00605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS00605 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ88_RS00605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS00610 PF10369 Small subunit of acetolactate synthase LFZ88_RS00615 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS00615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ88_RS00620 PF02381 MraZ protein, putative antitoxin-like LFZ88_RS00625 PF01795 MraW methylase family LFZ88_RS00630 PF04999 Cell division protein FtsL LFZ88_RS00635 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS00635 PF03717 Penicillin-binding Protein dimerisation domain LFZ88_RS00640 PF01225 Mur ligase family, catalytic domain LFZ88_RS00640 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS00640 PF08245 Mur ligase middle domain LFZ88_RS00645 PF01225 Mur ligase family, catalytic domain LFZ88_RS00645 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS00645 PF08245 Mur ligase middle domain LFZ88_RS00650 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LFZ88_RS00650 PF00953 Glycosyl transferase family 4 LFZ88_RS00655 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS00655 PF08245 Mur ligase middle domain LFZ88_RS00660 PF01098 Cell cycle protein LFZ88_RS00665 PF04101 Glycosyltransferase family 28 C-terminal domain LFZ88_RS00665 PF03033 Glycosyltransferase family 28 N-terminal domain LFZ88_RS00670 PF01225 Mur ligase family, catalytic domain LFZ88_RS00670 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS00670 PF08245 Mur ligase middle domain LFZ88_RS00675 PF07478 D-ala D-ala ligase C-terminus LFZ88_RS00675 PF01820 D-ala D-ala ligase N-terminus LFZ88_RS00680 PF03799 Cell division protein FtsQ LFZ88_RS00680 PF08478 POTRA domain, FtsQ-type LFZ88_RS00685 PF02491 SHS2 domain inserted in FTSA LFZ88_RS00690 PF00091 Tubulin/FtsZ family, GTPase domain LFZ88_RS00690 PF12327 FtsZ family, C-terminal domain LFZ88_RS00695 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LFZ88_RS00700 PF06558 Secretion monitor precursor protein (SecM) LFZ88_RS00705 PF01043 SecA preprotein cross-linking domain LFZ88_RS00705 PF07517 SecA DEAD-like domain LFZ88_RS00705 PF02810 SEC-C motif LFZ88_RS00705 PF07516 SecA Wing and Scaffold domain LFZ88_RS00710 PF00293 NUDIX domain LFZ88_RS00725 PF03884 DNA gyrase inhibitor YacG LFZ88_RS00730 PF07072 Cell division protein LFZ88_RS00735 PF01121 Dephospho-CoA kinase LFZ88_RS00740 PF00478 IMP dehydrogenase / GMP reductase domain LFZ88_RS00745 PF00482 Type II secretion system (T2SS), protein F LFZ88_RS00750 PF00437 Type II/IV secretion system protein LFZ88_RS00750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LFZ88_RS00755 PF07963 Prokaryotic N-terminal methylation motif LFZ88_RS00765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFZ88_RS00765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFZ88_RS00770 PF01510 N-acetylmuramoyl-L-alanine amidase LFZ88_RS00775 PF17113 Regulatory signalling modulator protein AmpE LFZ88_RS00780 PF04616 Glycosyl hydrolases family 43 LFZ88_RS00780 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LFZ88_RS00790 PF00324 Amino acid permease LFZ88_RS00795 PF07729 FCD domain LFZ88_RS00795 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS00800 PF00456 Transketolase, thiamine diphosphate binding domain LFZ88_RS00800 PF17831 Pyruvate dehydrogenase E1 component middle domain LFZ88_RS00805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFZ88_RS00805 PF00364 Biotin-requiring enzyme LFZ88_RS00805 PF02817 e3 binding domain LFZ88_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS00810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ88_RS00825 PF11737 Protein of unknown function (DUF3300) LFZ88_RS00830 PF11791 Aconitate B N-terminal domain LFZ88_RS00830 PF00330 Aconitase family (aconitate hydratase) LFZ88_RS00830 PF06434 Aconitate hydratase 2 N-terminus LFZ88_RS00845 PF06062 Uncharacterised protein family (UPF0231) LFZ88_RS00855 PF03812 2-keto-3-deoxygluconate permease LFZ88_RS00860 PF17042 Nucleotide-binding C-terminal domain LFZ88_RS00860 PF07005 Sugar-binding N-terminal domain LFZ88_RS00865 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFZ88_RS00870 PF00455 DeoR C terminal sensor domain LFZ88_RS00870 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS00875 PF02675 S-adenosylmethionine decarboxylase LFZ88_RS00880 PF17284 Spermidine synthase tetramerisation domain LFZ88_RS00885 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LFZ88_RS00890 PF07732 Multicopper oxidase LFZ88_RS00890 PF07731 Multicopper oxidase LFZ88_RS00890 PF00394 Multicopper oxidase LFZ88_RS00895 PF01011 PQQ enzyme repeat LFZ88_RS00900 PF00156 Phosphoribosyl transferase domain LFZ88_RS00905 PF00484 Carbonic anhydrase LFZ88_RS00910 PF00005 ABC transporter LFZ88_RS00915 PF01061 ABC-2 type transporter LFZ88_RS00920 PF00419 Fimbrial protein LFZ88_RS00925 PF13953 PapC C-terminal domain LFZ88_RS00925 PF13954 PapC N-terminal domain LFZ88_RS00925 PF00577 Outer membrane usher protein LFZ88_RS00930 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS00930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS00940 PF03610 PTS system fructose IIA component LFZ88_RS00945 PF01522 Polysaccharide deacetylase LFZ88_RS00950 PF02261 Aspartate decarboxylase LFZ88_RS00960 PF02569 Pantoate-beta-alanine ligase LFZ88_RS00965 PF02548 Ketopantoate hydroxymethyltransferase LFZ88_RS00970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LFZ88_RS00975 PF01743 Poly A polymerase head domain LFZ88_RS00975 PF12626 Polymerase A arginine-rich C-terminus LFZ88_RS00975 PF12627 Probable RNA and SrmB- binding site of polymerase A LFZ88_RS00980 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ88_RS00985 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFZ88_RS00990 PF17746 SfsA N-terminal OB domain LFZ88_RS00990 PF03749 Sugar fermentation stimulation protein RE domain LFZ88_RS00995 PF02834 LigT like Phosphoesterase LFZ88_RS01000 PF00271 Helicase conserved C-terminal domain LFZ88_RS01000 PF08482 ATP-dependent helicase C-terminal LFZ88_RS01000 PF04408 Helicase associated domain (HA2) LFZ88_RS01000 PF00270 DEAD/DEAH box helicase LFZ88_RS01005 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LFZ88_RS01005 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS01005 PF14814 Bifunctional transglycosylase second domain LFZ88_RS01005 PF00912 Transglycosylase LFZ88_RS01010 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS01010 PF00593 TonB dependent receptor LFZ88_RS01015 PF00005 ABC transporter LFZ88_RS01020 PF01497 Periplasmic binding protein LFZ88_RS01025 PF01032 FecCD transport family LFZ88_RS01045 PF13953 PapC C-terminal domain LFZ88_RS01045 PF13954 PapC N-terminal domain LFZ88_RS01045 PF00577 Outer membrane usher protein LFZ88_RS01050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS01050 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS01055 PF00419 Fimbrial protein LFZ88_RS01060 PF00419 Fimbrial protein LFZ88_RS01065 PF00419 Fimbrial protein LFZ88_RS01070 PF11245 Protein of unknown function (DUF2544) LFZ88_RS01075 PF00202 Aminotransferase class-III LFZ88_RS01080 PF00654 Voltage gated chloride channel LFZ88_RS01085 PF01521 Iron-sulphur cluster biosynthesis LFZ88_RS01090 PF03458 UPF0126 domain LFZ88_RS01095 PF01497 Periplasmic binding protein LFZ88_RS01100 PF01048 Phosphorylase superfamily LFZ88_RS01105 PF01966 HD domain LFZ88_RS01105 PF13286 Phosphohydrolase-associated domain LFZ88_RS01110 PF00595 PDZ domain LFZ88_RS01115 PF13556 PucR C-terminal helix-turn-helix domain LFZ88_RS01115 PF17853 GGDEF-like domain LFZ88_RS01115 PF05651 Putative sugar diacid recognition LFZ88_RS01120 PF11944 Protein of unknown function (DUF3461) LFZ88_RS01125 PF00083 Sugar (and other) transporter LFZ88_RS01125 PF07690 Major Facilitator Superfamily LFZ88_RS01130 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS01130 PF14602 Hexapeptide repeat of succinyl-transferase LFZ88_RS01130 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LFZ88_RS01135 PF01909 Nucleotidyltransferase domain LFZ88_RS01135 PF01966 HD domain LFZ88_RS01135 PF08335 GlnD PII-uridylyltransferase LFZ88_RS01135 PF01842 ACT domain LFZ88_RS01140 PF00557 Metallopeptidase family M24 LFZ88_RS01145 PF00318 Ribosomal protein S2 LFZ88_RS01155 PF00889 Elongation factor TS LFZ88_RS01160 PF00696 Amino acid kinase family LFZ88_RS01165 PF01765 Ribosome recycling factor LFZ88_RS01170 PF13288 DXP reductoisomerase C-terminal domain LFZ88_RS01170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFZ88_RS01170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LFZ88_RS01180 PF01255 Putative undecaprenyl diphosphate synthase LFZ88_RS01190 PF02163 Peptidase family M50 LFZ88_RS01190 PF17820 PDZ domain LFZ88_RS01195 PF07244 Surface antigen variable number repeat LFZ88_RS01195 PF01103 Surface antigen LFZ88_RS01200 PF03938 Outer membrane protein (OmpH-like) LFZ88_RS01205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LFZ88_RS01205 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS01210 PF07977 FabA-like domain LFZ88_RS01215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LFZ88_RS01215 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS01220 PF02684 Lipid-A-disaccharide synthetase LFZ88_RS01225 PF01351 Ribonuclease HII LFZ88_RS01230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFZ88_RS01230 PF01336 OB-fold nucleic acid binding domain LFZ88_RS01230 PF02811 PHP domain LFZ88_RS01230 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFZ88_RS01230 PF14579 Helix-hairpin-helix motif LFZ88_RS01235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LFZ88_RS01240 PF18416 N-acetylglucosamine binding protein domain 2 LFZ88_RS01240 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LFZ88_RS01245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ88_RS01245 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ88_RS01245 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ88_RS01250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ88_RS01255 PF11734 TilS substrate C-terminal domain LFZ88_RS01255 PF09179 TilS substrate binding domain LFZ88_RS01255 PF01171 PP-loop family LFZ88_RS01260 PF07073 Modulator of Rho-dependent transcription termination (ROF) LFZ88_RS01265 PF06786 Uncharacterised protein family (UPF0253) LFZ88_RS01270 PF07152 YaeQ protein LFZ88_RS01275 PF00472 RF-1 domain LFZ88_RS01280 PF17185 NlpE C-terminal OB domain LFZ88_RS01280 PF04170 NlpE N-terminal domain LFZ88_RS01285 PF04073 Aminoacyl-tRNA editing domain LFZ88_RS01285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ88_RS01285 PF03129 Anticodon binding domain LFZ88_RS01290 PF01980 tRNA-methyltransferase O LFZ88_RS01290 PF18389 TrmO C-terminal domain LFZ88_RS01295 PF16358 RcsF lipoprotein LFZ88_RS01300 PF03180 NLPA lipoprotein LFZ88_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS01310 PF09383 NIL domain LFZ88_RS01310 PF00005 ABC transporter LFZ88_RS01350 PF00248 Aldo/keto reductase family LFZ88_RS01355 PF03466 LysR substrate binding domain LFZ88_RS01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS01360 PF07690 Major Facilitator Superfamily LFZ88_RS01365 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ88_RS01370 PF08241 Methyltransferase domain LFZ88_RS01375 PF01464 Transglycosylase SLT domain LFZ88_RS01375 PF01476 LysM domain LFZ88_RS01380 PF00753 Metallo-beta-lactamase superfamily LFZ88_RS01380 PF16123 Hydroxyacylglutathione hydrolase C-terminus LFZ88_RS01385 PF08241 Methyltransferase domain LFZ88_RS01390 PF00075 RNase H LFZ88_RS01395 PF00929 Exonuclease LFZ88_RS01415 PF05947 Type VI secretion system, TssF LFZ88_RS01420 PF04965 Gene 25-like lysozyme LFZ88_RS01435 PF17871 AAA lid domain LFZ88_RS01435 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS01435 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ88_RS01435 PF07724 AAA domain (Cdc48 subfamily) LFZ88_RS01445 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LFZ88_RS01450 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LFZ88_RS01495 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LFZ88_RS01500 PF00691 OmpA family LFZ88_RS01500 PF05736 OprF membrane domain LFZ88_RS01520 PF06761 Intracellular multiplication and human macrophage-killing LFZ88_RS01520 PF14331 ImcF-related N-terminal domain LFZ88_RS01520 PF06744 Type VI secretion protein IcmF C-terminal LFZ88_RS01555 PF06715 Gp5 C-terminal repeat (3 copies) LFZ88_RS01555 PF04717 Type VI secretion system, phage-baseplate injector LFZ88_RS01565 PF03527 RHS protein LFZ88_RS01565 PF05593 RHS Repeat LFZ88_RS01615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS01615 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS01620 PF00577 Outer membrane usher protein LFZ88_RS01620 PF13953 PapC C-terminal domain LFZ88_RS01620 PF13954 PapC N-terminal domain LFZ88_RS01640 PF03466 LysR substrate binding domain LFZ88_RS01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS01650 PF13505 Outer membrane protein beta-barrel domain LFZ88_RS01660 PF00795 Carbon-nitrogen hydrolase LFZ88_RS01665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ88_RS01665 PF09317 Domain of unknown function (DUF1974) LFZ88_RS01665 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ88_RS01665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ88_RS01670 PF13580 SIS domain LFZ88_RS01675 PF13230 Glutamine amidotransferases class-II LFZ88_RS01680 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS01685 PF11798 IMS family HHH motif LFZ88_RS01685 PF11799 impB/mucB/samB family C-terminal domain LFZ88_RS01685 PF00817 impB/mucB/samB family LFZ88_RS01695 PF00472 RF-1 domain LFZ88_RS01700 PF07687 Peptidase dimerisation domain LFZ88_RS01700 PF01546 Peptidase family M20/M25/M40 LFZ88_RS01705 PF00156 Phosphoribosyl transferase domain LFZ88_RS01710 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LFZ88_RS01715 PF07417 Sigma factor-binding transcriptional regulator Crl LFZ88_RS01720 PF00267 Gram-negative porin LFZ88_RS01725 PF01472 PUA domain LFZ88_RS01725 PF00696 Amino acid kinase family LFZ88_RS01730 PF00171 Aldehyde dehydrogenase family LFZ88_RS01740 PF00665 Integrase core domain LFZ88_RS01740 PF13276 HTH-like domain LFZ88_RS01740 PF13333 Integrase core domain LFZ88_RS01750 PF08986 Domain of unknown function (DUF1889) LFZ88_RS01755 PF07690 Major Facilitator Superfamily LFZ88_RS01760 PF00330 Aconitase family (aconitate hydratase) LFZ88_RS01765 PF00694 Aconitase C-terminal domain LFZ88_RS01770 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ88_RS01775 PF00561 alpha/beta hydrolase fold LFZ88_RS01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS01780 PF03466 LysR substrate binding domain LFZ88_RS01790 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS01790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS01800 PF13953 PapC C-terminal domain LFZ88_RS01800 PF00577 Outer membrane usher protein LFZ88_RS01800 PF13954 PapC N-terminal domain LFZ88_RS01805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS01805 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS01810 PF16970 Type-1 fimbrial protein, A LFZ88_RS01830 PF00563 EAL domain LFZ88_RS01830 PF12792 CSS motif domain associated with EAL LFZ88_RS01845 PF13505 Outer membrane protein beta-barrel domain LFZ88_RS01865 PF02321 Outer membrane efflux protein LFZ88_RS01870 PF00873 AcrB/AcrD/AcrF family LFZ88_RS01875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS01880 PF00403 Heavy-metal-associated domain LFZ88_RS01885 PF00376 MerR family regulatory protein LFZ88_RS01885 PF09278 MerR, DNA binding LFZ88_RS01895 PF07690 Major Facilitator Superfamily LFZ88_RS01900 PF01555 DNA methylase LFZ88_RS01900 PF18273 Type III R-M EcoP15I C-terminal domain LFZ88_RS01905 PF08774 VRR-NUC domain LFZ88_RS01905 PF04851 Type III restriction enzyme, res subunit LFZ88_RS01910 PF01654 Cytochrome bd terminal oxidase subunit I LFZ88_RS01915 PF02322 Cytochrome bd terminal oxidase subunit II LFZ88_RS01930 PF00593 TonB dependent receptor LFZ88_RS01930 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS01935 PF01810 LysE type translocator LFZ88_RS01940 PF07338 Protein of unknown function (DUF1471) LFZ88_RS01945 PF00158 Sigma-54 interaction domain LFZ88_RS01945 PF06506 Propionate catabolism activator LFZ88_RS01945 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS01955 PF00285 Citrate synthase, C-terminal domain LFZ88_RS01960 PF03972 MmgE/PrpD family LFZ88_RS01965 PF16177 Acetyl-coenzyme A synthetase N-terminus LFZ88_RS01965 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS01965 PF00501 AMP-binding enzyme LFZ88_RS01970 PF00490 Delta-aminolevulinic acid dehydratase LFZ88_RS01975 PF03797 Autotransporter beta-domain LFZ88_RS01980 PF15977 Winged helix-turn-helix DNA binding LFZ88_RS01985 PF00144 Beta-lactamase LFZ88_RS01995 PF05992 SbmA/BacA-like family LFZ88_RS02000 PF07759 Protein of unknown function (DUF1615) LFZ88_RS02005 PF10954 Protein of unknown function (DUF2755) LFZ88_RS02010 PF10953 Protein of unknown function (DUF2754) LFZ88_RS02015 PF07478 D-ala D-ala ligase C-terminus LFZ88_RS02015 PF01820 D-ala D-ala ligase N-terminus LFZ88_RS02025 PF07690 Major Facilitator Superfamily LFZ88_RS02030 PF10796 Sigma-S stabilisation anti-adaptor protein LFZ88_RS02035 PF07769 psiF repeat LFZ88_RS02040 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS02040 PF05230 MASE2 domain LFZ88_RS02045 PF03807 NADP oxidoreductase coenzyme F420-dependent LFZ88_RS02045 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFZ88_RS02050 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LFZ88_RS02055 PF01202 Shikimate kinase LFZ88_RS02060 PF16362 YaiA protein LFZ88_RS02065 PF07302 AroM protein LFZ88_RS02070 PF06865 Pyrimidine/purine nucleoside phosphorylase LFZ88_RS02075 PF04381 Putative exonuclease, RdgC LFZ88_RS02080 PF00480 ROK family LFZ88_RS02085 PF07690 Major Facilitator Superfamily LFZ88_RS02090 PF13476 AAA domain LFZ88_RS02095 PF12320 Type 5 capsule protein repressor C-terminal domain LFZ88_RS02095 PF00149 Calcineurin-like phosphoesterase LFZ88_RS02100 PF00072 Response regulator receiver domain LFZ88_RS02100 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS02105 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS02105 PF00989 PAS fold LFZ88_RS02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS02105 PF11808 Phosphate regulon sensor protein PhoR LFZ88_RS02110 PF05525 Branched-chain amino acid transport protein LFZ88_RS02115 PF00324 Amino acid permease LFZ88_RS02120 PF00128 Alpha amylase, catalytic domain LFZ88_RS02120 PF02903 Alpha amylase, N-terminal ig-like domain LFZ88_RS02125 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFZ88_RS02125 PF00578 AhpC/TSA family LFZ88_RS02130 PF04336 Acyl carrier protein phosphodiesterase LFZ88_RS02135 PF02547 Queuosine biosynthesis protein LFZ88_RS02145 PF01702 Queuine tRNA-ribosyltransferase LFZ88_RS02150 PF02699 Preprotein translocase subunit LFZ88_RS02155 PF07549 SecD/SecF GG Motif LFZ88_RS02155 PF13721 SecD export protein N-terminal TM region LFZ88_RS02155 PF02355 Protein export membrane protein LFZ88_RS02160 PF07549 SecD/SecF GG Motif LFZ88_RS02160 PF02355 Protein export membrane protein LFZ88_RS02175 PF01844 HNH endonuclease LFZ88_RS02190 PF03502 Nucleoside-specific channel-forming protein, Tsx LFZ88_RS02195 PF11622 Protein of unknown function (DUF3251) LFZ88_RS02200 PF03477 ATP cone domain LFZ88_RS02205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ88_RS02205 PF01872 RibD C-terminal domain LFZ88_RS02210 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFZ88_RS02215 PF01029 NusB family LFZ88_RS02220 PF00586 AIR synthase related protein, N-terminal domain LFZ88_RS02220 PF02769 AIR synthase related protein, C-terminal domain LFZ88_RS02225 PF04608 Phosphatidylglycerophosphatase A LFZ88_RS02230 PF00248 Aldo/keto reductase family LFZ88_RS02235 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS02235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFZ88_RS02235 PF02780 Transketolase, C-terminal domain LFZ88_RS02240 PF00348 Polyprenyl synthetase LFZ88_RS02245 PF02609 Exonuclease VII small subunit LFZ88_RS02250 PF02568 Thiamine biosynthesis protein (ThiI) LFZ88_RS02250 PF02926 THUMP domain LFZ88_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS02265 PF08402 TOBE domain LFZ88_RS02265 PF00005 ABC transporter LFZ88_RS02270 PF01547 Bacterial extracellular solute-binding protein LFZ88_RS02275 PF07702 UTRA domain LFZ88_RS02275 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS02280 PF00266 Aminotransferase class-V LFZ88_RS02290 PF01965 DJ-1/PfpI family LFZ88_RS02295 PF02558 Ketopantoate reductase PanE/ApbA LFZ88_RS02295 PF08546 Ketopantoate reductase PanE/ApbA C terminal LFZ88_RS02300 PF04461 Protein of unknown function (DUF520) LFZ88_RS02305 PF07690 Major Facilitator Superfamily LFZ88_RS02320 PF01040 UbiA prenyltransferase family LFZ88_RS02325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LFZ88_RS02330 PF00510 Cytochrome c oxidase subunit III LFZ88_RS02335 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFZ88_RS02340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LFZ88_RS02340 PF06481 COX Aromatic Rich Motif LFZ88_RS02345 PF07690 Major Facilitator Superfamily LFZ88_RS02350 PF03923 Uncharacterized lipoprotein LFZ88_RS02350 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LFZ88_RS02360 PF01722 BolA-like protein LFZ88_RS02370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ88_RS02370 PF05698 Bacterial trigger factor protein (TF) C-terminus LFZ88_RS02370 PF05697 Bacterial trigger factor protein (TF) LFZ88_RS02375 PF00574 Clp protease LFZ88_RS02380 PF06689 ClpX C4-type zinc finger LFZ88_RS02380 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ88_RS02380 PF07724 AAA domain (Cdc48 subfamily) LFZ88_RS02385 PF02190 ATP-dependent protease La (LON) substrate-binding domain LFZ88_RS02385 PF05362 Lon protease (S16) C-terminal proteolytic domain LFZ88_RS02385 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS02390 PF00216 Bacterial DNA-binding protein LFZ88_RS02395 PF13145 PPIC-type PPIASE domain LFZ88_RS02410 PF06508 Queuosine biosynthesis protein QueC LFZ88_RS02415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS02415 PF12793 Sugar transport-related sRNA regulator N-term LFZ88_RS02430 PF13404 AsnC-type helix-turn-helix domain LFZ88_RS02430 PF01037 Lrp/AsnC ligand binding domain LFZ88_RS02435 PF00664 ABC transporter transmembrane region LFZ88_RS02435 PF00005 ABC transporter LFZ88_RS02440 PF00664 ABC transporter transmembrane region LFZ88_RS02440 PF00005 ABC transporter LFZ88_RS02445 PF00543 Nitrogen regulatory protein P-II LFZ88_RS02450 PF00909 Ammonium Transporter Family LFZ88_RS02460 PF09619 Type III secretion system lipoprotein chaperone (YscW) LFZ88_RS02465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ88_RS02475 PF00563 EAL domain LFZ88_RS02475 PF12792 CSS motif domain associated with EAL LFZ88_RS02480 PF01197 Ribosomal protein L31 LFZ88_RS02485 PF00444 Ribosomal protein L36 LFZ88_RS02490 PF10777 Inner membrane protein YlaC LFZ88_RS02495 PF14602 Hexapeptide repeat of succinyl-transferase LFZ88_RS02495 PF12464 Maltose acetyltransferase LFZ88_RS02500 PF05321 Haemolysin expression modulating protein LFZ88_RS02505 PF10757 Biofilm formation regulator YbaJ LFZ88_RS02510 PF00873 AcrB/AcrD/AcrF family LFZ88_RS02515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS02515 PF00529 HlyD membrane-fusion protein of T1SS LFZ88_RS02520 PF08361 MAATS-type transcriptional repressor, C-terminal region LFZ88_RS02520 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS02525 PF00924 Mechanosensitive ion channel LFZ88_RS02525 PF12795 Mechanosensitive ion channel porin domain LFZ88_RS02525 PF12794 Mechanosensitive ion channel inner membrane domain 1 LFZ88_RS02530 PF04754 Putative transposase, YhgA-like LFZ88_RS02535 PF10689 Protein of unknown function (DUF2496) LFZ88_RS02540 PF07445 Primosomal replication protein priC LFZ88_RS02545 PF04304 Protein of unknown function (DUF454) LFZ88_RS02555 PF00156 Phosphoribosyl transferase domain LFZ88_RS02560 PF12170 DNA polymerase III tau subunit V interacting with alpha LFZ88_RS02560 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LFZ88_RS02560 PF12169 DNA polymerase III subunits gamma and tau domain III LFZ88_RS02565 PF02575 YbaB/EbfC DNA-binding family LFZ88_RS02570 PF02132 RecR protein LFZ88_RS02570 PF13662 Toprim domain LFZ88_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS02575 PF00183 Hsp90 protein LFZ88_RS02585 PF05191 Adenylate kinase, active site lid LFZ88_RS02590 PF00762 Ferrochelatase LFZ88_RS02595 PF07859 alpha/beta hydrolase fold LFZ88_RS02600 PF00294 pfkB family carbohydrate kinase LFZ88_RS02605 PF02254 TrkA-N domain LFZ88_RS02605 PF00999 Sodium/hydrogen exchanger family LFZ88_RS02610 PF07690 Major Facilitator Superfamily LFZ88_RS02615 PF00149 Calcineurin-like phosphoesterase LFZ88_RS02615 PF02872 5'-nucleotidase, C-terminal domain LFZ88_RS02620 PF04073 Aminoacyl-tRNA editing domain LFZ88_RS02625 PF01963 TraB family LFZ88_RS02635 PF00403 Heavy-metal-associated domain LFZ88_RS02640 PF13411 MerR HTH family regulatory protein LFZ88_RS02645 PF01957 NfeD-like C-terminal, partner-binding LFZ88_RS02650 PF16200 C-terminal region of band_7 LFZ88_RS02650 PF01145 SPFH domain / Band 7 family LFZ88_RS02655 PF00005 ABC transporter LFZ88_RS02660 PF03649 Uncharacterised protein family (UPF0014) LFZ88_RS02665 PF00085 Thioredoxin LFZ88_RS02670 PF00106 short chain dehydrogenase LFZ88_RS02675 PF13472 GDSL-like Lipase/Acylhydrolase family LFZ88_RS02680 PF00005 ABC transporter LFZ88_RS02695 PF03180 NLPA lipoprotein LFZ88_RS02700 PF09383 NIL domain LFZ88_RS02700 PF00005 ABC transporter LFZ88_RS02705 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS02715 PF03466 LysR substrate binding domain LFZ88_RS02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS02720 PF04115 Ureidoglycolate lyase LFZ88_RS02725 PF01614 Bacterial transcriptional regulator LFZ88_RS02725 PF09339 IclR helix-turn-helix domain LFZ88_RS02730 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ88_RS02730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS02730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS02735 PF01261 Xylose isomerase-like TIM barrel LFZ88_RS02740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ88_RS02740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ88_RS02750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFZ88_RS02755 PF01979 Amidohydrolase family LFZ88_RS02760 PF00860 Permease family LFZ88_RS02765 PF02595 Glycerate kinase family LFZ88_RS02770 PF07883 Cupin domain LFZ88_RS02770 PF05899 Protein of unknown function (DUF861) LFZ88_RS02775 PF01546 Peptidase family M20/M25/M40 LFZ88_RS02780 PF02615 Malate/L-lactate dehydrogenase LFZ88_RS02785 PF02629 CoA binding domain LFZ88_RS02785 PF00549 CoA-ligase LFZ88_RS02790 PF06545 Protein of unknown function (DUF1116) LFZ88_RS02795 PF11392 Protein of unknown function (DUF2877) LFZ88_RS02800 PF00696 Amino acid kinase family LFZ88_RS02805 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LFZ88_RS02805 PF02222 ATP-grasp domain LFZ88_RS02810 PF00731 AIR carboxylase LFZ88_RS02820 PF12850 Calcineurin-like phosphoesterase superfamily domain LFZ88_RS02825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFZ88_RS02830 PF09190 DALR domain LFZ88_RS02830 PF01406 tRNA synthetases class I (C) catalytic domain LFZ88_RS02845 PF04307 LexA-binding, inner membrane-associated putative hydrolase LFZ88_RS02855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFZ88_RS02855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFZ88_RS02865 PF00419 Fimbrial protein LFZ88_RS02875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS02875 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS02880 PF00577 Outer membrane usher protein LFZ88_RS02880 PF13954 PapC N-terminal domain LFZ88_RS02880 PF13953 PapC C-terminal domain LFZ88_RS02885 PF00419 Fimbrial protein LFZ88_RS02890 PF00419 Fimbrial protein LFZ88_RS02895 PF00072 Response regulator receiver domain LFZ88_RS02895 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS02910 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS02935 PF00535 Glycosyl transferase family 2 LFZ88_RS02940 PF04138 GtrA-like protein LFZ88_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS02950 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS02950 PF00672 HAMP domain LFZ88_RS02955 PF00873 AcrB/AcrD/AcrF family LFZ88_RS02960 PF12852 Cupin LFZ88_RS02960 PF12833 Helix-turn-helix domain LFZ88_RS02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS02965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ88_RS02970 PF07338 Protein of unknown function (DUF1471) LFZ88_RS02975 PF04224 Protein of unknown function, DUF417 LFZ88_RS02985 PF00324 Amino acid permease LFZ88_RS02990 PF00924 Mechanosensitive ion channel LFZ88_RS03000 PF03797 Autotransporter beta-domain LFZ88_RS03000 PF00657 GDSL-like Lipase/Acylhydrolase LFZ88_RS03005 PF00881 Nitroreductase family LFZ88_RS03015 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS03015 PF16295 Tetracyclin repressor-like, C-terminal domain LFZ88_RS03020 PF12833 Helix-turn-helix domain LFZ88_RS03025 PF06643 Protein of unknown function (DUF1158) LFZ88_RS03030 PF04107 Glutamate-cysteine ligase family 2(GCS2) LFZ88_RS03035 PF01648 4'-phosphopantetheinyl transferase superfamily LFZ88_RS03035 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LFZ88_RS03040 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS03040 PF00593 TonB dependent receptor LFZ88_RS03045 PF11806 Domain of unknown function (DUF3327) LFZ88_RS03045 PF00756 Putative esterase LFZ88_RS03050 PF03621 MbtH-like protein LFZ88_RS03055 PF00668 Condensation domain LFZ88_RS03055 PF00501 AMP-binding enzyme LFZ88_RS03055 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS03055 PF00550 Phosphopantetheine attachment site LFZ88_RS03055 PF00975 Thioesterase domain LFZ88_RS03060 PF02706 Chain length determinant protein LFZ88_RS03065 PF00005 ABC transporter LFZ88_RS03070 PF01032 FecCD transport family LFZ88_RS03075 PF01032 FecCD transport family LFZ88_RS03080 PF05977 Transmembrane secretion effector LFZ88_RS03085 PF01497 Periplasmic binding protein LFZ88_RS03090 PF00425 chorismate binding enzyme LFZ88_RS03095 PF00501 AMP-binding enzyme LFZ88_RS03095 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS03100 PF00550 Phosphopantetheine attachment site LFZ88_RS03100 PF00857 Isochorismatase family LFZ88_RS03110 PF03061 Thioesterase superfamily LFZ88_RS03115 PF02554 Carbon starvation protein CstA LFZ88_RS03115 PF13722 5TM C-terminal transporter carbon starvation CstA LFZ88_RS03120 PF04328 Selenoprotein, putative LFZ88_RS03125 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS03130 PF00155 Aminotransferase class I and II LFZ88_RS03135 PF02195 ParB-like nuclease domain LFZ88_RS03140 PF11922 Domain of unknown function (DUF3440) LFZ88_RS03140 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ88_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS03145 PF03466 LysR substrate binding domain LFZ88_RS03155 PF13098 Thioredoxin-like domain LFZ88_RS03160 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFZ88_RS03160 PF00578 AhpC/TSA family LFZ88_RS03165 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS03165 PF13192 Thioredoxin domain LFZ88_RS03175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS03175 PF00384 Molybdopterin oxidoreductase LFZ88_RS03175 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS03180 PF13247 4Fe-4S dicluster domain LFZ88_RS03190 PF00582 Universal stress protein family LFZ88_RS03200 PF13823 Alcohol dehydrogenase GroES-associated LFZ88_RS03200 PF00107 Zinc-binding dehydrogenase LFZ88_RS03200 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS03205 PF14760 Rnk N-terminus LFZ88_RS03205 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ88_RS03215 PF00445 Ribonuclease T2 family LFZ88_RS03220 PF00939 Sodium:sulfate symporter transmembrane region LFZ88_RS03225 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ88_RS03230 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LFZ88_RS03235 PF04223 Citrate lyase, alpha subunit (CitF) LFZ88_RS03240 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS03245 PF06857 Malonate decarboxylase delta subunit (MdcD) LFZ88_RS03250 PF08218 Citrate lyase ligase C-terminal domain LFZ88_RS03260 PF00989 PAS fold LFZ88_RS03260 PF17203 Single cache domain 3 LFZ88_RS03260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFZ88_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS03265 PF00072 Response regulator receiver domain LFZ88_RS03265 PF12431 Transcriptional regulator LFZ88_RS03270 PF03606 C4-dicarboxylate anaerobic carrier LFZ88_RS03275 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LFZ88_RS03280 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS03285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFZ88_RS03290 PF00795 Carbon-nitrogen hydrolase LFZ88_RS03295 PF02416 mttA/Hcf106 family LFZ88_RS03300 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LFZ88_RS03300 PF04055 Radical SAM superfamily LFZ88_RS03305 PF03466 LysR substrate binding domain LFZ88_RS03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS03310 PF03099 Biotin/lipoate A/B protein ligase family LFZ88_RS03315 PF04359 Protein of unknown function (DUF493) LFZ88_RS03320 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ88_RS03320 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ88_RS03325 PF05036 Sporulation related domain LFZ88_RS03325 PF03330 Lytic transglycolase LFZ88_RS03330 PF01098 Cell cycle protein LFZ88_RS03335 PF03717 Penicillin-binding Protein dimerisation domain LFZ88_RS03335 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS03340 PF02590 Predicted SPOUT methyltransferase LFZ88_RS03350 PF00300 Histidine phosphatase superfamily (branch 1) LFZ88_RS03355 PF00155 Aminotransferase class I and II LFZ88_RS03360 PF01467 Cytidylyltransferase-like LFZ88_RS03365 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LFZ88_RS03365 PF06144 DNA polymerase III, delta subunit LFZ88_RS03370 PF04390 Lipopolysaccharide-assembly LFZ88_RS03375 PF00133 tRNA synthetases class I (I, L, M and V) LFZ88_RS03375 PF13603 Leucyl-tRNA synthetase, Domain 2 LFZ88_RS03375 PF08264 Anticodon-binding domain of tRNA LFZ88_RS03385 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LFZ88_RS03390 PF03812 2-keto-3-deoxygluconate permease LFZ88_RS03395 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS03395 PF00989 PAS fold LFZ88_RS03395 PF00158 Sigma-54 interaction domain LFZ88_RS03400 PF07295 Zinc-ribbon containing domain LFZ88_RS03410 PF06889 Protein of unknown function (DUF1266) LFZ88_RS03420 PF06889 Protein of unknown function (DUF1266) LFZ88_RS03435 PF00665 Integrase core domain LFZ88_RS03435 PF13333 Integrase core domain LFZ88_RS03435 PF13276 HTH-like domain LFZ88_RS03445 PF00012 Hsp70 protein LFZ88_RS03455 PF01156 Inosine-uridine preferring nucleoside hydrolase LFZ88_RS03460 PF00005 ABC transporter LFZ88_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS03470 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS03475 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS03480 PF00795 Carbon-nitrogen hydrolase LFZ88_RS03485 PF00571 CBS domain LFZ88_RS03485 PF03471 Transporter associated domain LFZ88_RS03490 PF02130 Uncharacterized protein family UPF0054 LFZ88_RS03495 PF02562 PhoH-like protein LFZ88_RS03500 PF01938 TRAM domain LFZ88_RS03500 PF04055 Radical SAM superfamily LFZ88_RS03500 PF00919 Uncharacterized protein family UPF0004 LFZ88_RS03505 PF01494 FAD binding domain LFZ88_RS03550 PF13537 Glutamine amidotransferase domain LFZ88_RS03550 PF00733 Asparagine synthase LFZ88_RS03560 PF13344 Haloacid dehalogenase-like hydrolase LFZ88_RS03565 PF01047 MarR family LFZ88_RS03565 PF00480 ROK family LFZ88_RS03570 PF01979 Amidohydrolase family LFZ88_RS03575 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFZ88_RS03580 PF02378 Phosphotransferase system, EIIC LFZ88_RS03580 PF00367 phosphotransferase system, EIIB LFZ88_RS03580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LFZ88_RS03585 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LFZ88_RS03585 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ88_RS03590 PF03573 outer membrane porin, OprD family LFZ88_RS03595 PF13982 YbfN-like lipoprotein LFZ88_RS03600 PF07690 Major Facilitator Superfamily LFZ88_RS03610 PF14537 Cytochrome c3 LFZ88_RS03610 PF00890 FAD binding domain LFZ88_RS03615 PF03466 LysR substrate binding domain LFZ88_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS03620 PF01475 Ferric uptake regulator family LFZ88_RS03625 PF00258 Flavodoxin LFZ88_RS03630 PF01402 Ribbon-helix-helix protein, copG family LFZ88_RS03635 PF12697 Alpha/beta hydrolase family LFZ88_RS03640 PF03925 SeqA protein C-terminal domain LFZ88_RS03640 PF17206 SeqA protein N-terminal domain LFZ88_RS03645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ88_RS03645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ88_RS03645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ88_RS03645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ88_RS03655 PF13520 Amino acid permease LFZ88_RS03660 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ88_RS03660 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ88_RS03660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ88_RS03665 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS03665 PF00072 Response regulator receiver domain LFZ88_RS03670 PF02702 Osmosensitive K+ channel His kinase sensor domain LFZ88_RS03670 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS03670 PF13492 GAF domain LFZ88_RS03670 PF13493 Domain of unknown function (DUF4118) LFZ88_RS03675 PF02669 K+-transporting ATPase, c chain LFZ88_RS03685 PF03814 Potassium-transporting ATPase A subunit LFZ88_RS03695 PF10725 Protein of unknown function (DUF2517) LFZ88_RS03700 PF03441 FAD binding domain of DNA photolyase LFZ88_RS03700 PF00875 DNA photolyase LFZ88_RS03705 PF00854 POT family LFZ88_RS03715 PF01784 NIF3 (NGG1p interacting factor 3) LFZ88_RS03720 PF02682 Carboxyltransferase domain, subdomain C and D LFZ88_RS03725 PF02626 Carboxyltransferase domain, subdomain A and B LFZ88_RS03730 PF03746 LamB/YcsF family LFZ88_RS03735 PF00589 Phage integrase family LFZ88_RS03750 PF03275 UDP-galactopyranose mutase LFZ88_RS03765 PF01061 ABC-2 type transporter LFZ88_RS03770 PF00005 ABC transporter LFZ88_RS03775 PF17994 Galactofuranosyltransferase 2 N-terminal LFZ88_RS03790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFZ88_RS03790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFZ88_RS03790 PF06827 Zinc finger found in FPG and IleRS LFZ88_RS03795 PF05145 Transition state regulatory protein AbrB LFZ88_RS03800 PF00285 Citrate synthase, C-terminal domain LFZ88_RS03815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFZ88_RS03820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LFZ88_RS03825 PF02910 Fumarate reductase flavoprotein C-term LFZ88_RS03825 PF00890 FAD binding domain LFZ88_RS03830 PF13085 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS03835 PF00676 Dehydrogenase E1 component LFZ88_RS03835 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS03835 PF16870 2-oxoglutarate dehydrogenase C-terminal LFZ88_RS03835 PF16078 2-oxoglutarate dehydrogenase N-terminus LFZ88_RS03840 PF02817 e3 binding domain LFZ88_RS03840 PF00364 Biotin-requiring enzyme LFZ88_RS03840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LFZ88_RS03845 PF08442 ATP-grasp domain LFZ88_RS03845 PF00549 CoA-ligase LFZ88_RS03850 PF00549 CoA-ligase LFZ88_RS03850 PF02629 CoA binding domain LFZ88_RS03855 PF01654 Cytochrome bd terminal oxidase subunit I LFZ88_RS03860 PF02322 Cytochrome bd terminal oxidase subunit II LFZ88_RS03865 PF08173 Membrane bound YbgT-like protein LFZ88_RS03870 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LFZ88_RS03875 PF03061 Thioesterase superfamily LFZ88_RS03880 PF01618 MotA/TolQ/ExbB proton channel family LFZ88_RS03885 PF02472 Biopolymer transport protein ExbD/TolR LFZ88_RS03890 PF06519 TolA C-terminal LFZ88_RS03895 PF07676 WD40-like Beta Propeller Repeat LFZ88_RS03895 PF04052 TolB amino-terminal domain LFZ88_RS03900 PF00691 OmpA family LFZ88_RS03905 PF16331 TolA binding protein trimerisation LFZ88_RS03905 PF13174 Tetratricopeptide repeat LFZ88_RS03950 PF02445 Quinolinate synthetase A protein LFZ88_RS03955 PF04973 Nicotinamide mononucleotide transporter LFZ88_RS03960 PF01545 Cation efflux family LFZ88_RS03965 PF13985 YbgS-like protein LFZ88_RS03970 PF00793 DAHP synthetase I family LFZ88_RS03975 PF05681 Fumarate hydratase (Fumerase) LFZ88_RS03975 PF05683 Fumarase C-terminus LFZ88_RS03980 PF05681 Fumarate hydratase (Fumerase) LFZ88_RS03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS03985 PF03466 LysR substrate binding domain LFZ88_RS03990 PF03466 LysR substrate binding domain LFZ88_RS03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS03995 PF02080 TrkA-C domain LFZ88_RS03995 PF03600 Citrate transporter LFZ88_RS04000 PF04277 Oxaloacetate decarboxylase, gamma chain LFZ88_RS04005 PF00364 Biotin-requiring enzyme LFZ88_RS04005 PF00682 HMGL-like LFZ88_RS04005 PF02436 Conserved carboxylase domain LFZ88_RS04010 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LFZ88_RS04015 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ88_RS04020 PF01032 FecCD transport family LFZ88_RS04025 PF00005 ABC transporter LFZ88_RS04030 PF00300 Histidine phosphatase superfamily (branch 1) LFZ88_RS04040 PF01263 Aldose 1-epimerase LFZ88_RS04045 PF00288 GHMP kinases N terminal domain LFZ88_RS04045 PF08544 GHMP kinases C terminal LFZ88_RS04045 PF10509 Galactokinase galactose-binding signature LFZ88_RS04050 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LFZ88_RS04050 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LFZ88_RS04055 PF16363 GDP-mannose 4,6 dehydratase LFZ88_RS04065 PF00005 ABC transporter LFZ88_RS04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS04070 PF03459 TOBE domain LFZ88_RS04075 PF10766 Multidrug efflux pump-associated protein AcrZ LFZ88_RS04085 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04090 PF03459 TOBE domain LFZ88_RS04090 PF00005 ABC transporter LFZ88_RS04100 PF10282 Lactonase, 7-bladed beta-propeller LFZ88_RS04105 PF01095 Pectinesterase LFZ88_RS04110 PF01979 Amidohydrolase family LFZ88_RS04115 PF00491 Arginase family LFZ88_RS04120 PF07702 UTRA domain LFZ88_RS04120 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS04125 PF17392 Urocanase C-terminal domain LFZ88_RS04125 PF17391 Urocanase N-terminal domain LFZ88_RS04125 PF01175 Urocanase Rossmann-like domain LFZ88_RS04130 PF00221 Aromatic amino acid lyase LFZ88_RS04135 PF01161 Phosphatidylethanolamine-binding protein LFZ88_RS04140 PF00202 Aminotransferase class-III LFZ88_RS04145 PF04055 Radical SAM superfamily LFZ88_RS04145 PF06968 Biotin and Thiamin Synthesis associated domain LFZ88_RS04150 PF00155 Aminotransferase class I and II LFZ88_RS04155 PF08241 Methyltransferase domain LFZ88_RS04170 PF12344 Ultra-violet resistance protein B LFZ88_RS04170 PF02151 UvrB/uvrC motif LFZ88_RS04170 PF04851 Type III restriction enzyme, res subunit LFZ88_RS04170 PF00271 Helicase conserved C-terminal domain LFZ88_RS04170 PF17757 UvrB interaction domain LFZ88_RS04175 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ88_RS04175 PF12468 Type III secretion system leucine rich repeat protein LFZ88_RS04180 PF01933 Uncharacterised protein family UPF0052 LFZ88_RS04185 PF06463 Molybdenum Cofactor Synthesis C LFZ88_RS04185 PF04055 Radical SAM superfamily LFZ88_RS04190 PF00994 Probable molybdopterin binding domain LFZ88_RS04195 PF01967 MoaC family LFZ88_RS04200 PF02597 ThiS family LFZ88_RS04205 PF02391 MoaE protein LFZ88_RS04210 PF01027 Inhibitor of apoptosis-promoting Bax1 LFZ88_RS04235 PF03706 Lysylphosphatidylglycerol synthase TM region LFZ88_RS04240 PF13091 PLD-like domain LFZ88_RS04245 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ88_RS04250 PF11076 Putative inner membrane protein YbhQ LFZ88_RS04265 PF00005 ABC transporter LFZ88_RS04270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS04275 PF09209 Tetracyclin repressor-like, C-terminal domain LFZ88_RS04275 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS04285 PF07690 Major Facilitator Superfamily LFZ88_RS04295 PF00456 Transketolase, thiamine diphosphate binding domain LFZ88_RS04300 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS04300 PF02780 Transketolase, C-terminal domain LFZ88_RS04305 PF00171 Aldehyde dehydrogenase family LFZ88_RS04305 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS04310 PF00271 Helicase conserved C-terminal domain LFZ88_RS04310 PF00270 DEAD/DEAH box helicase LFZ88_RS04315 PF13307 Helicase C-terminal domain LFZ88_RS04315 PF06733 DEAD_2 LFZ88_RS04320 PF02885 Glycosyl transferase family, helical bundle domain LFZ88_RS04325 PF07338 Protein of unknown function (DUF1471) LFZ88_RS04330 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFZ88_RS04335 PF05971 RNA methyltransferase LFZ88_RS04340 PF00924 Mechanosensitive ion channel LFZ88_RS04345 PF00005 ABC transporter LFZ88_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS04360 PF00210 Ferritin-like domain LFZ88_RS04365 PF00892 EamA-like transporter family LFZ88_RS04370 PF13505 Outer membrane protein beta-barrel domain LFZ88_RS04375 PF00884 Sulfatase LFZ88_RS04385 PF02742 Iron dependent repressor, metal binding and dimerisation domain LFZ88_RS04385 PF01325 Iron dependent repressor, N-terminal DNA binding domain LFZ88_RS04395 PF17969 L,D-transpeptidase C-terminal domain LFZ88_RS04395 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS04400 PF12848 ABC transporter LFZ88_RS04400 PF00005 ABC transporter LFZ88_RS04420 PF07350 Protein of unknown function (DUF1479) LFZ88_RS04430 PF02901 Pyruvate formate lyase-like LFZ88_RS04430 PF01228 Glycine radical LFZ88_RS04435 PF04055 Radical SAM superfamily LFZ88_RS04440 PF00899 ThiF family LFZ88_RS04445 PF03453 MoeA N-terminal region (domain I and II) LFZ88_RS04445 PF00994 Probable molybdopterin binding domain LFZ88_RS04445 PF03454 MoeA C-terminal region (domain IV) LFZ88_RS04450 PF01112 Asparaginase LFZ88_RS04455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS04455 PF00005 ABC transporter LFZ88_RS04460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS04465 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04470 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04475 PF18693 TRAM domain LFZ88_RS04475 PF04055 Radical SAM superfamily LFZ88_RS04475 PF00919 Uncharacterized protein family UPF0004 LFZ88_RS04480 PF10799 Biofilm formation protein (YliH/bssR) LFZ88_RS04490 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS04495 PF01012 Electron transfer flavoprotein domain LFZ88_RS04500 PF01012 Electron transfer flavoprotein domain LFZ88_RS04500 PF00766 Electron transfer flavoprotein FAD-binding domain LFZ88_RS04510 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ88_RS04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ88_RS04510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ88_RS04525 PF03466 LysR substrate binding domain LFZ88_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS04545 PF00043 Glutathione S-transferase, C-terminal domain LFZ88_RS04545 PF13417 Glutathione S-transferase, N-terminal domain LFZ88_RS04550 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ88_RS04550 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ88_RS04555 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS04555 PF00455 DeoR C terminal sensor domain LFZ88_RS04560 PF01569 PAP2 superfamily LFZ88_RS04565 PF07690 Major Facilitator Superfamily LFZ88_RS04575 PF07690 Major Facilitator Superfamily LFZ88_RS04580 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS04585 PF02080 TrkA-C domain LFZ88_RS04585 PF06826 Predicted Permease Membrane Region LFZ88_RS04590 PF11045 Putative inner membrane protein of Enterobacteriaceae LFZ88_RS04595 PF00462 Glutaredoxin LFZ88_RS04600 PF07214 Protein of unknown function (DUF1418) LFZ88_RS04605 PF00881 Nitroreductase family LFZ88_RS04610 PF08443 RimK-like ATP-grasp domain LFZ88_RS04610 PF18030 RimK PreATP-grasp domain LFZ88_RS04615 PF10722 Putative bacterial sensory transduction regulator LFZ88_RS04620 PF13416 Bacterial extracellular solute-binding protein LFZ88_RS04625 PF08402 TOBE domain LFZ88_RS04625 PF00005 ABC transporter LFZ88_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04635 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04640 PF10767 Protein of unknown function (DUF2593) LFZ88_RS04645 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ88_RS04650 PF03611 PTS system sugar-specific permease component LFZ88_RS04670 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS04685 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS04690 PF00005 ABC transporter LFZ88_RS04695 PF12883 Protein of unknown function (DUF3828) LFZ88_RS04700 PF01906 Putative heavy-metal-binding LFZ88_RS04705 PF01510 N-acetylmuramoyl-L-alanine amidase LFZ88_RS04710 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS04715 PF11066 Protein of unknown function (DUF2867) LFZ88_RS04715 PF13460 NAD(P)H-binding LFZ88_RS04720 PF01212 Beta-eliminating lyase LFZ88_RS04725 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ88_RS04725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS04725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS04730 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS04730 PF00970 Oxidoreductase FAD-binding domain LFZ88_RS04730 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS04735 PF03063 Prismane/CO dehydrogenase family LFZ88_RS04740 PF03956 Lysine exporter LysO LFZ88_RS04750 PF11398 Protein of unknown function (DUF2813) LFZ88_RS04755 PF04393 Protein of unknown function (DUF535) LFZ88_RS04760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS04765 PF02687 FtsX-like permease family LFZ88_RS04765 PF00005 ABC transporter LFZ88_RS04765 PF12704 MacB-like periplasmic core domain LFZ88_RS04775 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS04780 PF02617 ATP-dependent Clp protease adaptor protein ClpS LFZ88_RS04785 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS04785 PF07724 AAA domain (Cdc48 subfamily) LFZ88_RS04785 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ88_RS04785 PF02861 Clp amino terminal domain, pathogenicity island component LFZ88_RS04785 PF17871 AAA lid domain LFZ88_RS04810 PF00857 Isochorismatase family LFZ88_RS04815 PF05726 Pirin C-terminal cupin domain LFZ88_RS04815 PF02678 Pirin LFZ88_RS04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS04820 PF03466 LysR substrate binding domain LFZ88_RS04825 PF01176 Translation initiation factor 1A / IF-1 LFZ88_RS04835 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LFZ88_RS04840 PF00005 ABC transporter LFZ88_RS04840 PF00664 ABC transporter transmembrane region LFZ88_RS04845 PF00664 ABC transporter transmembrane region LFZ88_RS04845 PF00005 ABC transporter LFZ88_RS04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS04860 PF01037 Lrp/AsnC ligand binding domain LFZ88_RS04865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LFZ88_RS04865 PF17854 FtsK alpha domain LFZ88_RS04865 PF09397 Ftsk gamma domain LFZ88_RS04865 PF01580 FtsK/SpoIIIE family LFZ88_RS04870 PF03548 Outer membrane lipoprotein carrier protein LolA LFZ88_RS04875 PF12002 MgsA AAA+ ATPase C terminal LFZ88_RS04875 PF16193 AAA C-terminal domain LFZ88_RS04875 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS04885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ88_RS04885 PF02403 Seryl-tRNA synthetase N-terminal domain LFZ88_RS04890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS04890 PF00384 Molybdopterin oxidoreductase LFZ88_RS04890 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS04895 PF12800 4Fe-4S binding domain LFZ88_RS04895 PF13247 4Fe-4S dicluster domain LFZ88_RS04900 PF04976 DMSO reductase anchor subunit (DmsC) LFZ88_RS04905 PF07690 Major Facilitator Superfamily LFZ88_RS04910 PF13520 Amino acid permease LFZ88_RS04915 PF04055 Radical SAM superfamily LFZ88_RS04920 PF11047 Salmonella outer protein D LFZ88_RS04925 PF01228 Glycine radical LFZ88_RS04925 PF02901 Pyruvate formate lyase-like LFZ88_RS04930 PF01226 Formate/nitrite transporter LFZ88_RS04935 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LFZ88_RS04935 PF18381 YcaO cyclodehydratase C-terminal domain LFZ88_RS04940 PF04239 Protein of unknown function (DUF421) LFZ88_RS04945 PF00266 Aminotransferase class-V LFZ88_RS04950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFZ88_RS04955 PF01435 Peptidase family M48 LFZ88_RS04960 PF02224 Cytidylate kinase LFZ88_RS04965 PF00575 S1 RNA binding domain LFZ88_RS04970 PF00216 Bacterial DNA-binding protein LFZ88_RS04975 PF00753 Metallo-beta-lactamase superfamily LFZ88_RS04975 PF03772 Competence protein LFZ88_RS04980 PF00005 ABC transporter LFZ88_RS04980 PF00664 ABC transporter transmembrane region LFZ88_RS04985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LFZ88_RS04990 PF06224 Winged helix DNA-binding domain LFZ88_RS04995 PF03966 Trm112p-like protein LFZ88_RS05000 PF02348 Cytidylyltransferase LFZ88_RS05005 PF01636 Phosphotransferase enzyme family LFZ88_RS05010 PF02698 DUF218 domain LFZ88_RS05015 PF13847 Methyltransferase domain LFZ88_RS05020 PF17192 MukF middle domain LFZ88_RS05020 PF17193 MukF C-terminal domain LFZ88_RS05020 PF03882 MukF winged-helix domain LFZ88_RS05025 PF04288 MukE-like family LFZ88_RS05030 PF16330 MukB hinge domain LFZ88_RS05030 PF04310 MukB N-terminal LFZ88_RS05035 PF01471 Putative peptidoglycan binding domain LFZ88_RS05035 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS05045 PF05951 Bacterial protein of unknown function (DUF882) LFZ88_RS05050 PF00753 Metallo-beta-lactamase superfamily LFZ88_RS05055 PF00155 Aminotransferase class I and II LFZ88_RS05060 PF00267 Gram-negative porin LFZ88_RS05065 PF01336 OB-fold nucleic acid binding domain LFZ88_RS05065 PF00152 tRNA synthetases class II (D, K and N) LFZ88_RS05070 PF13404 AsnC-type helix-turn-helix domain LFZ88_RS05070 PF01037 Lrp/AsnC ligand binding domain LFZ88_RS05080 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS05085 PF01235 Sodium:alanine symporter family LFZ88_RS05090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LFZ88_RS05090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LFZ88_RS05095 PF12167 Arm DNA-binding domain LFZ88_RS05095 PF00589 Phage integrase family LFZ88_RS05115 PF06630 Enterobacterial exodeoxyribonuclease VIII LFZ88_RS05115 PF12684 PDDEXK-like domain of unknown function (DUF3799) LFZ88_RS05125 PF00717 Peptidase S24-like LFZ88_RS05125 PF01381 Helix-turn-helix LFZ88_RS05145 PF01695 IstB-like ATP binding protein LFZ88_RS05175 PF06183 DinI-like family LFZ88_RS05210 PF00182 Chitinase class I LFZ88_RS05215 PF03245 Bacteriophage Rz lysis protein LFZ88_RS05230 PF17288 Terminase RNAseH like domain LFZ88_RS05230 PF04466 Phage terminase large subunit LFZ88_RS05365 PF15645 Dermonecrotoxin of the Papain-like fold LFZ88_RS05375 PF02586 SOS response associated peptidase (SRAP) LFZ88_RS05390 PF06183 DinI-like family LFZ88_RS05395 PF01433 Peptidase family M1 domain LFZ88_RS05395 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LFZ88_RS05395 PF11940 Domain of unknown function (DUF3458) Ig-like fold LFZ88_RS05400 PF01180 Dihydroorotate dehydrogenase LFZ88_RS05405 PF07126 Cell-division protein ZapC LFZ88_RS05410 PF03476 MOSC N-terminal beta barrel domain LFZ88_RS05410 PF03473 MOSC domain LFZ88_RS05410 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS05415 PF10672 S-adenosylmethionine-dependent methyltransferase LFZ88_RS05415 PF01170 Putative RNA methylase family UPF0020 LFZ88_RS05415 PF02926 THUMP domain LFZ88_RS05420 PF12848 ABC transporter LFZ88_RS05420 PF00005 ABC transporter LFZ88_RS05420 PF16326 ABC transporter C-terminal domain LFZ88_RS05425 PF04403 Paraquat-inducible protein A LFZ88_RS05430 PF02470 MlaD protein LFZ88_RS05435 PF03886 ABC-type transport auxiliary lipoprotein component LFZ88_RS05440 PF04957 Ribosome modulation factor LFZ88_RS05445 PF07977 FabA-like domain LFZ88_RS05450 PF13654 AAA domain LFZ88_RS05450 PF05362 Lon protease (S16) C-terminal proteolytic domain LFZ88_RS05455 PF17414 MatP C-terminal ribbon-helix-helix domain LFZ88_RS05455 PF06303 MatP N-terminal domain LFZ88_RS05460 PF01389 OmpA-like transmembrane domain LFZ88_RS05460 PF00691 OmpA family LFZ88_RS05465 PF03846 Cell division inhibitor SulA LFZ88_RS05470 PF04993 TfoX N-terminal domain LFZ88_RS05470 PF04994 TfoX C-terminal domain LFZ88_RS05475 PF12805 FUSC-like inner membrane protein yccS LFZ88_RS05480 PF03733 Inner membrane component domain LFZ88_RS05485 PF13361 UvrD-like helicase C-terminal domain LFZ88_RS05485 PF00580 UvrD/REP helicase N-terminal domain LFZ88_RS05485 PF12462 DNA helicase IV / RNA helicase N terminal LFZ88_RS05490 PF02142 MGS-like domain LFZ88_RS05495 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LFZ88_RS05500 PF13380 CoA binding domain LFZ88_RS05505 PF08755 Hemimethylated DNA-binding protein YccV like LFZ88_RS05510 PF17785 PUA-like domain LFZ88_RS05510 PF10672 S-adenosylmethionine-dependent methyltransferase LFZ88_RS05515 PF01161 Phosphatidylethanolamine-binding protein LFZ88_RS05520 PF12833 Helix-turn-helix domain LFZ88_RS05525 PF00708 Acylphosphatase LFZ88_RS05530 PF04358 DsrC like protein LFZ88_RS05535 PF01027 Inhibitor of apoptosis-promoting Bax1 LFZ88_RS05550 PF00805 Pentapeptide repeats (8 copies) LFZ88_RS05560 PF07824 Type III secretion chaperone domain LFZ88_RS05565 PF05925 Enterobacterial virulence protein IpgD LFZ88_RS05570 PF13132 Domain of unknown function (DUF3950) LFZ88_RS05580 PF03577 Peptidase family C69 LFZ88_RS05585 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS05590 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS05590 PF00072 Response regulator receiver domain LFZ88_RS05595 PF00576 HIUase/Transthyretin family LFZ88_RS05605 PF01613 Flavin reductase like domain LFZ88_RS05610 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LFZ88_RS05610 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LFZ88_RS05615 PF01047 MarR family LFZ88_RS05620 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ88_RS05625 PF00171 Aldehyde dehydrogenase family LFZ88_RS05630 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LFZ88_RS05635 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LFZ88_RS05640 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ88_RS05645 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS05650 PF07690 Major Facilitator Superfamily LFZ88_RS05660 PF12706 Beta-lactamase superfamily domain LFZ88_RS05680 PF01556 DnaJ C terminal domain LFZ88_RS05680 PF00226 DnaJ domain LFZ88_RS05695 PF13098 Thioredoxin-like domain LFZ88_RS05695 PF02683 Cytochrome C biogenesis protein transmembrane region LFZ88_RS05695 PF11412 Disulphide bond corrector protein DsbC LFZ88_RS05700 PF06965 Na+/H+ antiporter 1 LFZ88_RS05700 PF13462 Thioredoxin LFZ88_RS05705 PF00578 AhpC/TSA family LFZ88_RS05710 PF00328 Histidine phosphatase superfamily (branch 2) LFZ88_RS05715 PF13993 YccJ-like protein LFZ88_RS05720 PF03358 NADPH-dependent FMN reductase LFZ88_RS05725 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ88_RS05730 PF08362 YcdC-like protein, C-terminal region LFZ88_RS05730 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS05740 PF14850 DNA-binding domain of Proline dehydrogenase LFZ88_RS05740 PF00171 Aldehyde dehydrogenase family LFZ88_RS05740 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LFZ88_RS05740 PF01619 Proline dehydrogenase LFZ88_RS05750 PF00474 Sodium:solute symporter family LFZ88_RS05760 PF02562 PhoH-like protein LFZ88_RS05765 PF01418 Helix-turn-helix domain, rpiR family LFZ88_RS05765 PF01380 SIS domain LFZ88_RS05770 PF00474 Sodium:solute symporter family LFZ88_RS05780 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LFZ88_RS05785 PF01344 Kelch motif LFZ88_RS05790 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ88_RS05795 PF07690 Major Facilitator Superfamily LFZ88_RS05800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ88_RS05800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ88_RS05805 PF13276 HTH-like domain LFZ88_RS05805 PF13333 Integrase core domain LFZ88_RS05805 PF00665 Integrase core domain LFZ88_RS05825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ88_RS05830 PF02811 PHP domain LFZ88_RS05835 PF02613 Nitrate reductase delta subunit LFZ88_RS05840 PF06496 Protein of unknown function (DUF1097) LFZ88_RS05845 PF03783 Curli production assembly/transport component CsgG LFZ88_RS05850 PF10614 Type VIII secretion system (T8SS), CsgF protein LFZ88_RS05855 PF10627 Curli assembly protein CsgE LFZ88_RS05860 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS05870 PF07012 Curlin associated repeat LFZ88_RS05875 PF07012 Curlin associated repeat LFZ88_RS05880 PF10610 Thin aggregative fimbriae synthesis protein LFZ88_RS05890 PF01661 Macro domain LFZ88_RS05895 PF13091 PLD-like domain LFZ88_RS05900 PF01757 Acyltransferase family LFZ88_RS05910 PF04349 Periplasmic glucan biosynthesis protein, MdoG LFZ88_RS05915 PF00535 Glycosyl transferase family 2 LFZ88_RS05920 PF07119 Protein of unknown function (DUF1375) LFZ88_RS05925 PF13984 MsyB protein LFZ88_RS05930 PF07690 Major Facilitator Superfamily LFZ88_RS05940 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ88_RS05945 PF12368 Rhodanase C-terminal LFZ88_RS05945 PF00581 Rhodanese-like domain LFZ88_RS05945 PF17773 UPF0176 acylphosphatase like domain LFZ88_RS05950 PF04264 YceI-like domain LFZ88_RS05955 PF01292 Prokaryotic cytochrome b561 LFZ88_RS05965 PF10968 Protein of unknown function (DUF2770) LFZ88_RS05970 PF01266 FAD dependent oxidoreductase LFZ88_RS05975 PF13991 BssS protein family LFZ88_RS05980 PF06183 DinI-like family LFZ88_RS05985 PF01979 Amidohydrolase family LFZ88_RS05995 PF04399 Glutaredoxin 2, C terminal domain LFZ88_RS05995 PF13417 Glutathione S-transferase, N-terminal domain LFZ88_RS06000 PF07690 Major Facilitator Superfamily LFZ88_RS06005 PF13302 Acetyltransferase (GNAT) domain LFZ88_RS06010 PF04337 Protein of unknown function, DUF480 LFZ88_RS06015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ88_RS06020 PF03023 Lipid II flippase MurJ LFZ88_RS06025 PF05130 FlgN protein LFZ88_RS06030 PF04316 Anti-sigma-28 factor, FlgM LFZ88_RS06035 PF13144 Chaperone for flagella basal body P-ring formation LFZ88_RS06040 PF00460 Flagella basal body rod protein LFZ88_RS06045 PF00460 Flagella basal body rod protein LFZ88_RS06045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ88_RS06050 PF13860 FlgD Ig-like domain LFZ88_RS06050 PF03963 Flagellar hook capping protein - N-terminal region LFZ88_RS06050 PF13861 FlgD Tudor-like domain LFZ88_RS06055 PF07559 Flagellar basal body protein FlaE LFZ88_RS06055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ88_RS06055 PF00460 Flagella basal body rod protein LFZ88_RS06060 PF00460 Flagella basal body rod protein LFZ88_RS06060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ88_RS06065 PF00460 Flagella basal body rod protein LFZ88_RS06065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ88_RS06070 PF02107 Flagellar L-ring protein LFZ88_RS06075 PF02119 Flagellar P-ring protein LFZ88_RS06080 PF10135 Rod binding protein LFZ88_RS06080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LFZ88_RS06085 PF00460 Flagella basal body rod protein LFZ88_RS06085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFZ88_RS06090 PF00669 Bacterial flagellin N-terminal helical region LFZ88_RS06100 PF10150 Ribonuclease E/G family LFZ88_RS06100 PF00575 S1 RNA binding domain LFZ88_RS06100 PF12111 Polyribonucleotide phosphorylase C terminal LFZ88_RS06110 PF00849 RNA pseudouridylate synthase LFZ88_RS06110 PF01479 S4 domain LFZ88_RS06125 PF02545 Maf-like protein LFZ88_RS06130 PF02620 Large ribosomal RNA subunit accumulation protein YceD LFZ88_RS06135 PF01783 Ribosomal L32p protein family LFZ88_RS06140 PF02504 Fatty acid synthesis protein LFZ88_RS06145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFZ88_RS06145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFZ88_RS06150 PF00698 Acyl transferase domain LFZ88_RS06160 PF00550 Phosphopantetheine attachment site LFZ88_RS06165 PF02801 Beta-ketoacyl synthase, C-terminal domain LFZ88_RS06165 PF00109 Beta-ketoacyl synthase, N-terminal domain LFZ88_RS06170 PF01063 Amino-transferase class IV LFZ88_RS06175 PF02618 YceG-like family LFZ88_RS06180 PF02223 Thymidylate kinase LFZ88_RS06185 PF09115 DNA polymerase III, delta subunit, C terminal LFZ88_RS06190 PF01026 TatD related DNase LFZ88_RS06195 PF00367 phosphotransferase system, EIIB LFZ88_RS06195 PF02378 Phosphotransferase system, EIIC LFZ88_RS06200 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS06200 PF00593 TonB dependent receptor LFZ88_RS06210 PF07233 Protein of unknown function (DUF1425) LFZ88_RS06215 PF13036 Peptidoglycan-synthase activator LpoB LFZ88_RS06220 PF01636 Phosphotransferase enzyme family LFZ88_RS06225 PF00933 Glycosyl hydrolase family 3 N terminal domain LFZ88_RS06230 PF05728 Uncharacterised protein family (UPF0227) LFZ88_RS06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS06240 PF05433 Glycine zipper 2TM domain LFZ88_RS06245 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS06250 PF07338 Protein of unknown function (DUF1471) LFZ88_RS06255 PF17969 L,D-transpeptidase C-terminal domain LFZ88_RS06255 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS06255 PF01476 LysM domain LFZ88_RS06260 PF17757 UvrB interaction domain LFZ88_RS06260 PF03461 TRCF domain LFZ88_RS06260 PF02559 CarD-like/TRCF domain LFZ88_RS06260 PF00271 Helicase conserved C-terminal domain LFZ88_RS06260 PF00270 DEAD/DEAH box helicase LFZ88_RS06265 PF12704 MacB-like periplasmic core domain LFZ88_RS06265 PF02687 FtsX-like permease family LFZ88_RS06270 PF00005 ABC transporter LFZ88_RS06275 PF02687 FtsX-like permease family LFZ88_RS06275 PF12704 MacB-like periplasmic core domain LFZ88_RS06280 PF00480 ROK family LFZ88_RS06285 PF02146 Sir2 family LFZ88_RS06290 PF13416 Bacterial extracellular solute-binding protein LFZ88_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS06300 PF06767 Sif protein LFZ88_RS06305 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS06310 PF08402 TOBE domain LFZ88_RS06310 PF00005 ABC transporter LFZ88_RS06320 PF07687 Peptidase dimerisation domain LFZ88_RS06320 PF01546 Peptidase family M20/M25/M40 LFZ88_RS06330 PF08007 Cupin superfamily protein LFZ88_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS06335 PF08918 PhoQ Sensor LFZ88_RS06340 PF00072 Response regulator receiver domain LFZ88_RS06340 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS06345 PF08328 Adenylosuccinate lyase C-terminal LFZ88_RS06345 PF00206 Lyase LFZ88_RS06350 PF04356 Protein of unknown function (DUF489) LFZ88_RS06360 PF00293 NUDIX domain LFZ88_RS06370 PF00849 RNA pseudouridylate synthase LFZ88_RS06375 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ88_RS06380 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain LFZ88_RS06380 PF00589 Phage integrase family LFZ88_RS06430 PF00436 Single-strand binding protein family LFZ88_RS06435 PF04098 Rad52/22 family double-strand break repair protein LFZ88_RS06480 PF00717 Peptidase S24-like LFZ88_RS06480 PF01381 Helix-turn-helix LFZ88_RS06500 PF00772 DnaB-like helicase N terminal domain LFZ88_RS06500 PF03796 DnaB-like helicase C terminal domain LFZ88_RS06555 PF03589 Antitermination protein LFZ88_RS06575 PF03245 Bacteriophage Rz lysis protein LFZ88_RS06580 PF10549 ORF11CD3 domain LFZ88_RS06580 PF09669 Phage regulatory protein Rha (Phage_pRha) LFZ88_RS06585 PF03592 Terminase small subunit LFZ88_RS06590 PF17288 Terminase RNAseH like domain LFZ88_RS06590 PF04466 Phage terminase large subunit LFZ88_RS06720 PF06183 DinI-like family LFZ88_RS06725 PF00717 Peptidase S24-like LFZ88_RS06730 PF11799 impB/mucB/samB family C-terminal domain LFZ88_RS06730 PF13438 Domain of unknown function (DUF4113) LFZ88_RS06730 PF00817 impB/mucB/samB family LFZ88_RS06735 PF02586 SOS response associated peptidase (SRAP) LFZ88_RS06740 PF00180 Isocitrate/isopropylmalate dehydrogenase LFZ88_RS06765 PF06183 DinI-like family LFZ88_RS06770 PF00652 Ricin-type beta-trefoil lectin domain LFZ88_RS06775 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS06790 PF06316 Enterobacterial Ail/Lom protein LFZ88_RS06815 PF00011 Hsp20/alpha crystallin family LFZ88_RS06825 PF01292 Prokaryotic cytochrome b561 LFZ88_RS06835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS06840 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS06845 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS06845 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS06850 PF00005 ABC transporter LFZ88_RS06855 PF00005 ABC transporter LFZ88_RS06860 PF00924 Mechanosensitive ion channel LFZ88_RS06875 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LFZ88_RS06880 PF13427 Domain of unknown function (DUF4111) LFZ88_RS06880 PF01909 Nucleotidyltransferase domain LFZ88_RS06905 PF01817 Chorismate mutase type II LFZ88_RS06910 PF01810 LysE type translocator LFZ88_RS06920 PF09313 Domain of unknown function (DUF1971) LFZ88_RS06925 PF08956 Domain of unknown function (DUF1869) LFZ88_RS06940 PF04226 Transglycosylase associated protein LFZ88_RS06945 PF03891 Domain of unknown function (DUF333) LFZ88_RS06955 PF04343 Protein of unknown function, DUF488 LFZ88_RS06960 PF07690 Major Facilitator Superfamily LFZ88_RS06965 PF02311 AraC-like ligand binding domain LFZ88_RS06965 PF12833 Helix-turn-helix domain LFZ88_RS06970 PF04284 Protein of unknown function (DUF441) LFZ88_RS06980 PF04073 Aminoacyl-tRNA editing domain LFZ88_RS06985 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS06985 PF17155 Gammaproteobacterial periplasmic sensor domain LFZ88_RS06995 PF04285 Protein of unknown function (DUF444) LFZ88_RS07000 PF08298 PrkA AAA domain LFZ88_RS07000 PF06798 PrkA serine protein kinase C-terminal domain LFZ88_RS07005 PF06629 MltA-interacting protein MipA LFZ88_RS07010 PF13186 Iron-sulfur cluster-binding domain LFZ88_RS07010 PF04055 Radical SAM superfamily LFZ88_RS07015 PF00248 Aldo/keto reductase family LFZ88_RS07020 PF01263 Aldose 1-epimerase LFZ88_RS07030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFZ88_RS07030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFZ88_RS07035 PF01641 SelR domain LFZ88_RS07040 PF07023 Protein of unknown function (DUF1315) LFZ88_RS07045 PF00857 Isochorismatase family LFZ88_RS07050 PF00710 Asparaginase, N-terminal LFZ88_RS07050 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ88_RS07055 PF01343 Peptidase family S49 LFZ88_RS07060 PF00881 Nitroreductase family LFZ88_RS07065 PF00586 AIR synthase related protein, N-terminal domain LFZ88_RS07065 PF02769 AIR synthase related protein, C-terminal domain LFZ88_RS07070 PF01751 Toprim domain LFZ88_RS07070 PF01131 DNA topoisomerase LFZ88_RS07075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LFZ88_RS07075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LFZ88_RS07080 PF07383 Protein of unknown function (DUF1496) LFZ88_RS07085 PF00293 NUDIX domain LFZ88_RS07090 PF03372 Endonuclease/Exonuclease/phosphatase family LFZ88_RS07100 PF00202 Aminotransferase class-III LFZ88_RS07105 PF04958 Arginine N-succinyltransferase beta subunit LFZ88_RS07110 PF00171 Aldehyde dehydrogenase family LFZ88_RS07115 PF04996 Succinylarginine dihydrolase LFZ88_RS07120 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LFZ88_RS07130 PF07813 LTXXQ motif family protein LFZ88_RS07140 PF02540 NAD synthase LFZ88_RS07145 PF04355 SmpA / OmlA family LFZ88_RS07155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS07160 PF02378 Phosphotransferase system, EIIC LFZ88_RS07165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LFZ88_RS07170 PF07883 Cupin domain LFZ88_RS07170 PF12833 Helix-turn-helix domain LFZ88_RS07175 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFZ88_RS07175 PF02056 Family 4 glycosyl hydrolase LFZ88_RS07180 PF04794 YdjC-like protein LFZ88_RS07185 PF18011 C-terminal domain found in long catalases LFZ88_RS07185 PF06628 Catalase-related immune-responsive LFZ88_RS07185 PF00199 Catalase LFZ88_RS07195 PF10729 Cell division activator CedA LFZ88_RS07200 PF00375 Sodium:dicarboxylate symporter family LFZ88_RS07205 PF04307 LexA-binding, inner membrane-associated putative hydrolase LFZ88_RS07210 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS07215 PF14002 YniB-like protein LFZ88_RS07220 PF03881 Fructosamine kinase LFZ88_RS07225 PF11080 Endoribonuclease GhoS LFZ88_RS07230 PF00294 pfkB family carbohydrate kinase LFZ88_RS07235 PF04338 Protein of unknown function, DUF481 LFZ88_RS07250 PF01223 DNA/RNA non-specific endonuclease LFZ88_RS07255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFZ88_RS07255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFZ88_RS07255 PF02824 TGS domain LFZ88_RS07255 PF03129 Anticodon binding domain LFZ88_RS07260 PF00707 Translation initiation factor IF-3, C-terminal domain LFZ88_RS07260 PF05198 Translation initiation factor IF-3, N-terminal domain LFZ88_RS07265 PF01632 Ribosomal protein L35 LFZ88_RS07270 PF00453 Ribosomal protein L20 LFZ88_RS07280 PF01409 tRNA synthetases class II core domain (F) LFZ88_RS07280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LFZ88_RS07285 PF03483 B3/4 domain LFZ88_RS07285 PF03484 tRNA synthetase B5 domain LFZ88_RS07285 PF03147 Ferredoxin-fold anticodon binding domain LFZ88_RS07285 PF01588 Putative tRNA binding domain LFZ88_RS07285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LFZ88_RS07290 PF00216 Bacterial DNA-binding protein LFZ88_RS07295 PF01032 FecCD transport family LFZ88_RS07300 PF00255 Glutathione peroxidase LFZ88_RS07305 PF00005 ABC transporter LFZ88_RS07310 PF00877 NlpC/P60 family LFZ88_RS07315 PF00563 EAL domain LFZ88_RS07320 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LFZ88_RS07325 PF10636 Hemin uptake protein hemP LFZ88_RS07330 PF00793 DAHP synthetase I family LFZ88_RS07335 PF03618 Kinase/pyrophosphorylase LFZ88_RS07340 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ88_RS07340 PF00391 PEP-utilising enzyme, mobile domain LFZ88_RS07340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFZ88_RS07345 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS07345 PF00501 AMP-binding enzyme LFZ88_RS07355 PF01494 FAD binding domain LFZ88_RS07360 PF01012 Electron transfer flavoprotein domain LFZ88_RS07360 PF00766 Electron transfer flavoprotein FAD-binding domain LFZ88_RS07365 PF01012 Electron transfer flavoprotein domain LFZ88_RS07370 PF12833 Helix-turn-helix domain LFZ88_RS07370 PF02311 AraC-like ligand binding domain LFZ88_RS07375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LFZ88_RS07375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ88_RS07375 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ88_RS07380 PF01144 Coenzyme A transferase LFZ88_RS07385 PF01487 Type I 3-dehydroquinase LFZ88_RS07390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFZ88_RS07390 PF08501 Shikimate dehydrogenase substrate binding domain LFZ88_RS07395 PF07690 Major Facilitator Superfamily LFZ88_RS07400 PF07690 Major Facilitator Superfamily LFZ88_RS07405 PF08965 Domain of unknown function (DUF1870) LFZ88_RS07415 PF01594 AI-2E family transporter LFZ88_RS07420 PF13183 4Fe-4S dicluster domain LFZ88_RS07420 PF01565 FAD binding domain LFZ88_RS07420 PF02913 FAD linked oxidases, C-terminal domain LFZ88_RS07425 PF03061 Thioesterase superfamily LFZ88_RS07430 PF15930 Domain of unknown function LFZ88_RS07435 PF00375 Sodium:dicarboxylate symporter family LFZ88_RS07440 PF01521 Iron-sulphur cluster biosynthesis LFZ88_RS07445 PF01458 Uncharacterized protein family (UPF0051) LFZ88_RS07450 PF00005 ABC transporter LFZ88_RS07455 PF01458 Uncharacterized protein family (UPF0051) LFZ88_RS07460 PF00266 Aminotransferase class-V LFZ88_RS07465 PF02657 Fe-S metabolism associated domain LFZ88_RS07470 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS07470 PF01476 LysM domain LFZ88_RS07470 PF17969 L,D-transpeptidase C-terminal domain LFZ88_RS07475 PF04728 Lipoprotein leucine-zipper LFZ88_RS07480 PF04728 Lipoprotein leucine-zipper LFZ88_RS07485 PF00224 Pyruvate kinase, barrel domain LFZ88_RS07485 PF02887 Pyruvate kinase, alpha/beta domain LFZ88_RS07495 PF00324 Amino acid permease LFZ88_RS07500 PF00561 alpha/beta hydrolase fold LFZ88_RS07510 PF00294 pfkB family carbohydrate kinase LFZ88_RS07515 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS07515 PF00384 Molybdopterin oxidoreductase LFZ88_RS07515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS07520 PF03916 Polysulphide reductase, NrfD LFZ88_RS07525 PF13247 4Fe-4S dicluster domain LFZ88_RS07530 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS07535 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS07535 PF00072 Response regulator receiver domain LFZ88_RS07540 PF10965 Protein of unknown function (DUF2767) LFZ88_RS07545 PF08349 Protein of unknown function (DUF1722) LFZ88_RS07550 PF13411 MerR HTH family regulatory protein LFZ88_RS07555 PF00072 Response regulator receiver domain LFZ88_RS07555 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS07560 PF00672 HAMP domain LFZ88_RS07560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFZ88_RS07560 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS07560 PF01627 Hpt domain LFZ88_RS07560 PF00072 Response regulator receiver domain LFZ88_RS07570 PF00263 Bacterial type II and III secretion system protein LFZ88_RS07570 PF03958 Bacterial type II/III secretion system short domain LFZ88_RS07590 PF03433 EspA-like secreted protein LFZ88_RS07600 PF04888 Secretion system effector C (SseC) like family LFZ88_RS07605 PF05802 Enterobacterial EspB protein LFZ88_RS07645 PF01514 Secretory protein of YscJ/FliF family LFZ88_RS07660 PF07201 HrpJ-like domain LFZ88_RS07670 PF00771 FHIPEP family LFZ88_RS07675 PF18269 T3SS EscN ATPase C-terminal domain LFZ88_RS07675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS07690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ88_RS07695 PF00813 FliP family LFZ88_RS07700 PF01313 Bacterial export proteins, family 3 LFZ88_RS07705 PF01311 Bacterial export proteins, family 1 LFZ88_RS07710 PF01312 FlhB HrpN YscU SpaS Family LFZ88_RS07725 PF01554 MatE LFZ88_RS07730 PF00677 Lumazine binding domain LFZ88_RS07740 PF07690 Major Facilitator Superfamily LFZ88_RS07745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS07745 PF03466 LysR substrate binding domain LFZ88_RS07750 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS07760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFZ88_RS07760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFZ88_RS07765 PF00877 NlpC/P60 family LFZ88_RS07770 PF00462 Glutaredoxin LFZ88_RS07780 PF00929 Exonuclease LFZ88_RS07785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ88_RS07790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFZ88_RS07795 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS07795 PF16925 Tetracyclin repressor-like, C-terminal domain LFZ88_RS07800 PF06945 Protein of unknown function (DUF1289) LFZ88_RS07805 PF00248 Aldo/keto reductase family LFZ88_RS07810 PF00080 Copper/zinc superoxide dismutase (SODC) LFZ88_RS07815 PF04632 Fusaric acid resistance protein family LFZ88_RS07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS07820 PF00529 HlyD membrane-fusion protein of T1SS LFZ88_RS07825 PF07869 Protein of unknown function (DUF1656) LFZ88_RS07830 PF01047 MarR family LFZ88_RS07835 PF05433 Glycine zipper 2TM domain LFZ88_RS07840 PF03702 Anhydro-N-acetylmuramic acid kinase LFZ88_RS07845 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LFZ88_RS07850 PF01243 Pyridoxamine 5'-phosphate oxidase LFZ88_RS07850 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LFZ88_RS07855 PF01479 S4 domain LFZ88_RS07855 PF00579 tRNA synthetases class I (W and Y) LFZ88_RS07860 PF08543 Phosphomethylpyrimidine kinase LFZ88_RS07865 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS07865 PF00043 Glutathione S-transferase, C-terminal domain LFZ88_RS07870 PF00854 POT family LFZ88_RS07875 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ88_RS07875 PF10576 Iron-sulfur binding domain of endonuclease III LFZ88_RS07875 PF00633 Helix-hairpin-helix motif LFZ88_RS07880 PF02508 Rnf-Nqr subunit, membrane protein LFZ88_RS07885 PF04205 FMN-binding domain LFZ88_RS07890 PF03116 NQR2, RnfD, RnfE family LFZ88_RS07895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ88_RS07895 PF13375 RnfC Barrel sandwich hybrid domain LFZ88_RS07895 PF12838 4Fe-4S dicluster domain LFZ88_RS07895 PF10531 SLBB domain LFZ88_RS07900 PF04060 Putative Fe-S cluster LFZ88_RS07905 PF02508 Rnf-Nqr subunit, membrane protein LFZ88_RS07910 PF10754 Protein of unknown function (DUF2569) LFZ88_RS07915 PF05321 Haemolysin expression modulating protein LFZ88_RS07925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ88_RS07925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ88_RS07930 PF00962 Adenosine/AMP deaminase LFZ88_RS07935 PF02378 Phosphotransferase system, EIIC LFZ88_RS07935 PF00367 phosphotransferase system, EIIB LFZ88_RS07940 PF06097 Bacterial protein of unknown function (DUF945) LFZ88_RS07945 PF01238 Phosphomannose isomerase type I LFZ88_RS07950 PF05683 Fumarase C-terminus LFZ88_RS07950 PF05681 Fumarate hydratase (Fumerase) LFZ88_RS07955 PF10415 Fumarase C C-terminus LFZ88_RS07955 PF00206 Lyase LFZ88_RS07960 PF05472 DNA replication terminus site-binding protein (Ter protein) LFZ88_RS07965 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS07965 PF00672 HAMP domain LFZ88_RS07970 PF01979 Amidohydrolase family LFZ88_RS07970 PF13382 Adenine deaminase C-terminal domain LFZ88_RS07975 PF00267 Gram-negative porin LFZ88_RS07985 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS07985 PF00072 Response regulator receiver domain LFZ88_RS07990 PF06942 GlpM protein LFZ88_RS07995 PF13520 Amino acid permease LFZ88_RS08005 PF07338 Protein of unknown function (DUF1471) LFZ88_RS08010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LFZ88_RS08010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LFZ88_RS08010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LFZ88_RS08015 PF02233 NAD(P) transhydrogenase beta subunit LFZ88_RS08020 PF01594 AI-2E family transporter LFZ88_RS08030 PF00893 Small Multidrug Resistance protein LFZ88_RS08035 PF00893 Small Multidrug Resistance protein LFZ88_RS08040 PF00089 Trypsin LFZ88_RS08050 PF07690 Major Facilitator Superfamily LFZ88_RS08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS08055 PF03466 LysR substrate binding domain LFZ88_RS08065 PF00480 ROK family LFZ88_RS08075 PF00654 Voltage gated chloride channel LFZ88_RS08080 PF00571 CBS domain LFZ88_RS08080 PF00005 ABC transporter LFZ88_RS08085 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS08090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ88_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS08100 PF02613 Nitrate reductase delta subunit LFZ88_RS08105 PF04976 DMSO reductase anchor subunit (DmsC) LFZ88_RS08110 PF13247 4Fe-4S dicluster domain LFZ88_RS08110 PF12800 4Fe-4S binding domain LFZ88_RS08115 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS08115 PF00384 Molybdopterin oxidoreductase LFZ88_RS08115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS08120 PF00384 Molybdopterin oxidoreductase LFZ88_RS08120 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS08120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS08125 PF06649 Protein of unknown function (DUF1161) LFZ88_RS08130 PF06788 Uncharacterised protein family (UPF0257) LFZ88_RS08135 PF13302 Acetyltransferase (GNAT) domain LFZ88_RS08140 PF06932 Protein of unknown function (DUF1283) LFZ88_RS08145 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LFZ88_RS08150 PF13378 Enolase C-terminal domain-like LFZ88_RS08150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS08155 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS08155 PF00107 Zinc-binding dehydrogenase LFZ88_RS08160 PF07690 Major Facilitator Superfamily LFZ88_RS08160 PF00083 Sugar (and other) transporter LFZ88_RS08165 PF08125 Mannitol dehydrogenase C-terminal domain LFZ88_RS08165 PF01232 Mannitol dehydrogenase Rossmann domain LFZ88_RS08170 PF14001 YdfZ protein LFZ88_RS08175 PF07729 FCD domain LFZ88_RS08175 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS08180 PF00106 short chain dehydrogenase LFZ88_RS08185 PF01432 Peptidase family M3 LFZ88_RS08190 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ88_RS08195 PF02464 Competence-damaged protein LFZ88_RS08200 PF04076 Bacterial OB fold (BOF) protein LFZ88_RS08205 PF07690 Major Facilitator Superfamily LFZ88_RS08210 PF00892 EamA-like transporter family LFZ88_RS08215 PF13999 MarB protein LFZ88_RS08220 PF12833 Helix-turn-helix domain LFZ88_RS08225 PF01047 MarR family LFZ88_RS08230 PF01914 MarC family integral membrane protein LFZ88_RS08235 PF07690 Major Facilitator Superfamily LFZ88_RS08240 PF03466 LysR substrate binding domain LFZ88_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS08245 PF00171 Aldehyde dehydrogenase family LFZ88_RS08250 PF04960 Glutaminase LFZ88_RS08255 PF13811 Domain of unknown function (DUF4186) LFZ88_RS08260 PF01062 Bestrophin, RFP-TM, chloride channel LFZ88_RS08270 PF00267 Gram-negative porin LFZ88_RS08275 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ88_RS08285 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LFZ88_RS08295 PF01455 HupF/HypC family LFZ88_RS08300 PF01750 Hydrogenase maturation protease LFZ88_RS08305 PF01292 Prokaryotic cytochrome b561 LFZ88_RS08310 PF00374 Nickel-dependent hydrogenase LFZ88_RS08315 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ88_RS08315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ88_RS08325 PF07729 FCD domain LFZ88_RS08325 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS08330 PF00107 Zinc-binding dehydrogenase LFZ88_RS08330 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS08335 PF07690 Major Facilitator Superfamily LFZ88_RS08345 PF07690 Major Facilitator Superfamily LFZ88_RS08350 PF01494 FAD binding domain LFZ88_RS08360 PF02547 Queuosine biosynthesis protein LFZ88_RS08365 PF01042 Endoribonuclease L-PSP LFZ88_RS08400 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS08405 PF03553 Na+/H+ antiporter family LFZ88_RS08410 PF00155 Aminotransferase class I and II LFZ88_RS08415 PF00128 Alpha amylase, catalytic domain LFZ88_RS08415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ88_RS08420 PF00128 Alpha amylase, catalytic domain LFZ88_RS08425 PF00128 Alpha amylase, catalytic domain LFZ88_RS08425 PF11941 Domain of unknown function (DUF3459) LFZ88_RS08425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ88_RS08435 PF06411 HdeA/HdeB family LFZ88_RS08440 PF02566 OsmC-like protein LFZ88_RS08445 PF10684 Putative biofilm-dependent modulation protein LFZ88_RS08450 PF08136 30S ribosomal protein subunit S22 family LFZ88_RS08455 PF03949 Malic enzyme, NAD binding domain LFZ88_RS08455 PF00390 Malic enzyme, N-terminal domain LFZ88_RS08460 PF00107 Zinc-binding dehydrogenase LFZ88_RS08460 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS08465 PF01292 Prokaryotic cytochrome b561 LFZ88_RS08470 PF13247 4Fe-4S dicluster domain LFZ88_RS08470 PF12800 4Fe-4S binding domain LFZ88_RS08470 PF09163 Formate dehydrogenase N, transmembrane LFZ88_RS08480 PF00892 EamA-like transporter family LFZ88_RS08490 PF00267 Gram-negative porin LFZ88_RS08500 PF07690 Major Facilitator Superfamily LFZ88_RS08505 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS08510 PF07690 Major Facilitator Superfamily LFZ88_RS08515 PF14710 Respiratory nitrate reductase alpha N-terminal LFZ88_RS08515 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS08515 PF00384 Molybdopterin oxidoreductase LFZ88_RS08520 PF13247 4Fe-4S dicluster domain LFZ88_RS08520 PF14711 Respiratory nitrate reductase beta C-terminal LFZ88_RS08525 PF02613 Nitrate reductase delta subunit LFZ88_RS08530 PF02665 Nitrate reductase gamma subunit LFZ88_RS08535 PF02567 Phenazine biosynthesis-like protein LFZ88_RS08540 PF00797 N-acetyltransferase LFZ88_RS08555 PF00324 Amino acid permease LFZ88_RS08560 PF06004 Bacterial protein of unknown function (DUF903) LFZ88_RS08570 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS08570 PF00593 TonB dependent receptor LFZ88_RS08575 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS08575 PF07729 FCD domain LFZ88_RS08580 PF16884 N-terminal domain of oxidoreductase LFZ88_RS08580 PF00107 Zinc-binding dehydrogenase LFZ88_RS08590 PF04657 Putative inner membrane exporter, YdcZ LFZ88_RS08595 PF10735 Protein of unknown function (DUF2526) LFZ88_RS08615 PF10753 Toxin GhoT_OrtT LFZ88_RS08625 PF00171 Aldehyde dehydrogenase family LFZ88_RS08630 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS08630 PF00155 Aminotransferase class I and II LFZ88_RS08635 PF01427 D-ala-D-ala dipeptidase LFZ88_RS08650 PF06767 Sif protein LFZ88_RS08655 PF10829 Protein of unknown function (DUF2554) LFZ88_RS08660 PF01136 Peptidase family U32 LFZ88_RS08660 PF12392 Collagenase LFZ88_RS08665 PF07883 Cupin domain LFZ88_RS08665 PF01381 Helix-turn-helix LFZ88_RS08675 PF11769 Protein of unknown function (DUF3313) LFZ88_RS08680 PF03848 Tellurite resistance protein TehB LFZ88_RS08685 PF03595 Voltage-dependent anion channel LFZ88_RS08690 PF18836 Beta solenoid repeat from YDCK LFZ88_RS08695 PF13302 Acetyltransferase (GNAT) domain LFZ88_RS08700 PF05343 M42 glutamyl aminopeptidase LFZ88_RS08705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS08710 PF03611 PTS system sugar-specific permease component LFZ88_RS08715 PF03437 BtpA family LFZ88_RS08720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS08725 PF00834 Ribulose-phosphate 3 epimerase family LFZ88_RS08730 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS08730 PF00455 DeoR C terminal sensor domain LFZ88_RS08735 PF00583 Acetyltransferase (GNAT) family LFZ88_RS08740 PF01070 FMN-dependent dehydrogenase LFZ88_RS08745 PF04264 YceI-like domain LFZ88_RS08750 PF04349 Periplasmic glucan biosynthesis protein, MdoG LFZ88_RS08755 PF00135 Carboxylesterase family LFZ88_RS08760 PF07063 Domain of unknown function (DUF1338) LFZ88_RS08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS08765 PF03466 LysR substrate binding domain LFZ88_RS08770 PF00672 HAMP domain LFZ88_RS08770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS08770 PF02203 Tar ligand binding domain homologue LFZ88_RS08780 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS08780 PF00107 Zinc-binding dehydrogenase LFZ88_RS08785 PF02583 Metal-sensitive transcriptional repressor LFZ88_RS08795 PF00657 GDSL-like Lipase/Acylhydrolase LFZ88_RS08795 PF06767 Sif protein LFZ88_RS08805 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS08810 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS08815 PF00005 ABC transporter LFZ88_RS08820 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS08830 PF08242 Methyltransferase domain LFZ88_RS08835 PF01292 Prokaryotic cytochrome b561 LFZ88_RS08840 PF02698 DUF218 domain LFZ88_RS08845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LFZ88_RS08845 PF00271 Helicase conserved C-terminal domain LFZ88_RS08845 PF04408 Helicase associated domain (HA2) LFZ88_RS08845 PF11898 Domain of unknown function (DUF3418) LFZ88_RS08845 PF00270 DEAD/DEAH box helicase LFZ88_RS08850 PF02525 Flavodoxin-like fold LFZ88_RS08860 PF07027 Protein of unknown function (DUF1318) LFZ88_RS08865 PF13617 YnbE-like lipoprotein LFZ88_RS08870 PF11739 Dicarboxylate transport LFZ88_RS08875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ88_RS08875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ88_RS08880 PF03724 META domain LFZ88_RS08885 PF03891 Domain of unknown function (DUF333) LFZ88_RS08890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS08890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LFZ88_RS08890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LFZ88_RS08890 PF10371 Domain of unknown function LFZ88_RS08890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LFZ88_RS08895 PF00665 Integrase core domain LFZ88_RS08895 PF13333 Integrase core domain LFZ88_RS08895 PF13276 HTH-like domain LFZ88_RS08910 PF00582 Universal stress protein family LFZ88_RS08915 PF00893 Small Multidrug Resistance protein LFZ88_RS08925 PF00589 Phage integrase family LFZ88_RS08925 PF12167 Arm DNA-binding domain LFZ88_RS08930 PF01171 PP-loop family LFZ88_RS08935 PF00271 Helicase conserved C-terminal domain LFZ88_RS08935 PF03880 DbpA RNA binding domain LFZ88_RS08935 PF00270 DEAD/DEAH box helicase LFZ88_RS08945 PF01544 CorA-like Mg2+ transporter protein LFZ88_RS08950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS08950 PF02203 Tar ligand binding domain homologue LFZ88_RS08950 PF00672 HAMP domain LFZ88_RS08960 PF01713 Smr domain LFZ88_RS08965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ88_RS08965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFZ88_RS08970 PF00027 Cyclic nucleotide-binding domain LFZ88_RS08970 PF13545 Crp-like helix-turn-helix domain LFZ88_RS08975 PF00582 Universal stress protein family LFZ88_RS08980 PF10749 Protein of unknown function (DUF2534) LFZ88_RS08985 PF00924 Mechanosensitive ion channel LFZ88_RS09005 PF08534 Redoxin LFZ88_RS09025 PF06445 GyrI-like small molecule binding domain LFZ88_RS09025 PF12833 Helix-turn-helix domain LFZ88_RS09040 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS09050 PF00248 Aldo/keto reductase family LFZ88_RS09055 PF03466 LysR substrate binding domain LFZ88_RS09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS09065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS09070 PF00246 Zinc carboxypeptidase LFZ88_RS09075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS09075 PF13378 Enolase C-terminal domain-like LFZ88_RS09080 PF08534 Redoxin LFZ88_RS09085 PF00158 Sigma-54 interaction domain LFZ88_RS09085 PF18024 Helix-turn-helix domain LFZ88_RS09090 PF05128 Domain of unknown function (DUF697) LFZ88_RS09095 PF04317 YcjX-like family, DUF463 LFZ88_RS09100 PF00581 Rhodanese-like domain LFZ88_RS09105 PF09584 Phage shock protein PspD (Phageshock_PspD) LFZ88_RS09110 PF04024 PspC domain LFZ88_RS09115 PF06667 Phage shock protein B LFZ88_RS09120 PF04012 PspA/IM30 family LFZ88_RS09125 PF00158 Sigma-54 interaction domain LFZ88_RS09125 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS09130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS09140 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS09140 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS09145 PF00005 ABC transporter LFZ88_RS09145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS09150 PF00005 ABC transporter LFZ88_RS09185 PF17876 Cold shock domain LFZ88_RS09185 PF00773 RNB domain LFZ88_RS09185 PF00575 S1 RNA binding domain LFZ88_RS09185 PF08206 Ribonuclease B OB domain LFZ88_RS09195 PF13426 PAS domain LFZ88_RS09195 PF00563 EAL domain LFZ88_RS09195 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS09205 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS09205 PF00455 DeoR C terminal sensor domain LFZ88_RS09210 PF05433 Glycine zipper 2TM domain LFZ88_RS09215 PF01253 Translation initiation factor SUI1 LFZ88_RS09220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ88_RS09225 PF18073 Rubredoxin metal binding domain LFZ88_RS09230 PF06305 Lipopolysaccharide assembly protein A domain LFZ88_RS09240 PF01569 PAP2 superfamily LFZ88_RS09245 PF00925 GTP cyclohydrolase II LFZ88_RS09250 PF00694 Aconitase C-terminal domain LFZ88_RS09250 PF00330 Aconitase family (aconitate hydratase) LFZ88_RS09265 PF03466 LysR substrate binding domain LFZ88_RS09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS09270 PF01131 DNA topoisomerase LFZ88_RS09270 PF01751 Toprim domain LFZ88_RS09270 PF08272 Topoisomerase I zinc-ribbon-like LFZ88_RS09270 PF01396 Topoisomerase DNA binding C4 zinc finger LFZ88_RS09275 PF10692 Protein of unknown function (DUF2498) LFZ88_RS09280 PF01343 Peptidase family S49 LFZ88_RS09280 PF08496 Peptidase family S49 N-terminal LFZ88_RS09285 PF00106 short chain dehydrogenase LFZ88_RS09290 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LFZ88_RS09295 PF00849 RNA pseudouridylate synthase LFZ88_RS09295 PF01479 S4 domain LFZ88_RS09300 PF01300 Telomere recombination LFZ88_RS09305 PF02811 PHP domain LFZ88_RS09310 PF08255 Trp-operon Leader Peptide LFZ88_RS09315 PF04715 Anthranilate synthase component I, N terminal region LFZ88_RS09315 PF00425 chorismate binding enzyme LFZ88_RS09320 PF02885 Glycosyl transferase family, helical bundle domain LFZ88_RS09320 PF00591 Glycosyl transferase family, a/b domain LFZ88_RS09320 PF00117 Glutamine amidotransferase class-I LFZ88_RS09325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFZ88_RS09325 PF00218 Indole-3-glycerol phosphate synthase LFZ88_RS09330 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS09335 PF00290 Tryptophan synthase alpha chain LFZ88_RS09340 PF10685 Stress-induced bacterial acidophilic repeat motif LFZ88_RS09345 PF05974 Domain of unknown function (DUF892) LFZ88_RS09350 PF05974 Domain of unknown function (DUF892) LFZ88_RS09355 PF05067 Manganese containing catalase LFZ88_RS09360 PF03922 OmpW family LFZ88_RS09365 PF03692 Putative zinc- or iron-chelating domain LFZ88_RS09375 PF04279 Intracellular septation protein A LFZ88_RS09380 PF03061 Thioesterase superfamily LFZ88_RS09385 PF03544 Gram-negative bacterial TonB protein C-terminal LFZ88_RS09390 PF03795 YCII-related domain LFZ88_RS09395 PF13396 Phospholipase_D-nuclease N-terminal LFZ88_RS09395 PF13091 PLD-like domain LFZ88_RS09400 PF04269 Protein of unknown function, DUF440 LFZ88_RS09405 PF00520 Ion transport protein LFZ88_RS09405 PF00027 Cyclic nucleotide-binding domain LFZ88_RS09410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS09410 PF00005 ABC transporter LFZ88_RS09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS09415 PF00005 ABC transporter LFZ88_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS09420 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS09425 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS09430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS09440 PF01914 MarC family integral membrane protein LFZ88_RS09445 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS09445 PF00171 Aldehyde dehydrogenase family LFZ88_RS09450 PF00265 Thymidine kinase LFZ88_RS09455 PF00816 H-NS histone family LFZ88_RS09460 PF00483 Nucleotidyl transferase LFZ88_RS09465 PF00072 Response regulator receiver domain LFZ88_RS09470 PF01734 Patatin-like phospholipase LFZ88_RS09475 PF02810 SEC-C motif LFZ88_RS09480 PF01842 ACT domain LFZ88_RS09480 PF00551 Formyl transferase LFZ88_RS09520 PF02665 Nitrate reductase gamma subunit LFZ88_RS09525 PF02613 Nitrate reductase delta subunit LFZ88_RS09530 PF13247 4Fe-4S dicluster domain LFZ88_RS09530 PF14711 Respiratory nitrate reductase beta C-terminal LFZ88_RS09535 PF14710 Respiratory nitrate reductase alpha N-terminal LFZ88_RS09535 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS09535 PF00384 Molybdopterin oxidoreductase LFZ88_RS09540 PF07690 Major Facilitator Superfamily LFZ88_RS09550 PF07730 Histidine kinase LFZ88_RS09550 PF00672 HAMP domain LFZ88_RS09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS09550 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LFZ88_RS09555 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS09555 PF00072 Response regulator receiver domain LFZ88_RS09560 PF11924 Inverse autotransporter, beta-domain LFZ88_RS09565 PF02635 DsrE/DsrF-like family LFZ88_RS09570 PF06150 ChaB LFZ88_RS09575 PF01699 Sodium/calcium exchanger protein LFZ88_RS09580 PF00793 DAHP synthetase I family LFZ88_RS09585 PF13369 Transglutaminase-like superfamily LFZ88_RS09590 PF04247 Invasion gene expression up-regulator, SirB LFZ88_RS09595 PF13847 Methyltransferase domain LFZ88_RS09595 PF17827 PrmC N-terminal domain LFZ88_RS09600 PF00472 RF-1 domain LFZ88_RS09600 PF03462 PCRF domain LFZ88_RS09605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFZ88_RS09605 PF01488 Shikimate / quinate 5-dehydrogenase LFZ88_RS09605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFZ88_RS09610 PF03550 Outer membrane lipoprotein LolB LFZ88_RS09615 PF08544 GHMP kinases C terminal LFZ88_RS09615 PF00288 GHMP kinases N terminal domain LFZ88_RS09620 PF14572 Phosphoribosyl synthetase-associated domain LFZ88_RS09620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFZ88_RS09625 PF01740 STAS domain LFZ88_RS09625 PF00916 Sulfate permease family LFZ88_RS09630 PF10762 Protein of unknown function (DUF2583) LFZ88_RS09635 PF01195 Peptidyl-tRNA hydrolase LFZ88_RS09640 PF01926 50S ribosome-binding GTPase LFZ88_RS09640 PF06071 Protein of unknown function (DUF933) LFZ88_RS09660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ88_RS09660 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ88_RS09665 PF00374 Nickel-dependent hydrogenase LFZ88_RS09670 PF01292 Prokaryotic cytochrome b561 LFZ88_RS09675 PF01750 Hydrogenase maturation protease LFZ88_RS09680 PF07449 Hydrogenase-1 expression protein HyaE LFZ88_RS09685 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LFZ88_RS09690 PF01654 Cytochrome bd terminal oxidase subunit I LFZ88_RS09695 PF02322 Cytochrome bd terminal oxidase subunit II LFZ88_RS09700 PF08173 Membrane bound YbgT-like protein LFZ88_RS09705 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LFZ88_RS09705 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LFZ88_RS09710 PF01204 Trehalase LFZ88_RS09715 PF04226 Transglycosylase associated protein LFZ88_RS09720 PF07317 Flagellar regulator YcgR LFZ88_RS09720 PF07238 PilZ domain LFZ88_RS09725 PF01464 Transglycosylase SLT domain LFZ88_RS09730 PF02016 LD-carboxypeptidase N-terminal domain LFZ88_RS09730 PF17676 LD-carboxypeptidase C-terminal domain LFZ88_RS09735 PF03471 Transporter associated domain LFZ88_RS09735 PF02080 TrkA-C domain LFZ88_RS09735 PF00999 Sodium/hydrogen exchanger family LFZ88_RS09740 PF00842 Alanine racemase, C-terminal domain LFZ88_RS09740 PF01168 Alanine racemase, N-terminal domain LFZ88_RS09745 PF01266 FAD dependent oxidoreductase LFZ88_RS09750 PF04293 SpoVR like protein LFZ88_RS09755 PF07840 FadR C-terminal domain LFZ88_RS09755 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS09760 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LFZ88_RS09765 PF02600 Disulfide bond formation protein DsbB LFZ88_RS09775 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system LFZ88_RS09780 PF03692 Putative zinc- or iron-chelating domain LFZ88_RS09785 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ88_RS09790 PF05166 YcgL domain LFZ88_RS09795 PF05209 Septum formation inhibitor MinC, N-terminal domain LFZ88_RS09795 PF03775 Septum formation inhibitor MinC, C-terminal domain LFZ88_RS09800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFZ88_RS09805 PF03776 Septum formation topological specificity factor MinE LFZ88_RS09810 PF00570 HRDC domain LFZ88_RS09810 PF01612 3'-5' exonuclease LFZ88_RS09815 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS09815 PF00501 AMP-binding enzyme LFZ88_RS09825 PF03843 Outer membrane lipoprotein Slp family LFZ88_RS09830 PF00814 Glycoprotease family LFZ88_RS09835 PF13307 Helicase C-terminal domain LFZ88_RS09835 PF04851 Type III restriction enzyme, res subunit LFZ88_RS09840 PF01042 Endoribonuclease L-PSP LFZ88_RS09845 PF03701 Uncharacterised protein family (UPF0181) LFZ88_RS09850 PF00425 chorismate binding enzyme LFZ88_RS09850 PF04715 Anthranilate synthase component I, N terminal region LFZ88_RS09855 PF00293 NUDIX domain LFZ88_RS09860 PF03313 Serine dehydratase alpha chain LFZ88_RS09860 PF03315 Serine dehydratase beta chain LFZ88_RS09865 PF12792 CSS motif domain associated with EAL LFZ88_RS09865 PF00563 EAL domain LFZ88_RS09870 PF03471 Transporter associated domain LFZ88_RS09870 PF03741 Integral membrane protein TerC family LFZ88_RS09880 PF03610 PTS system fructose IIA component LFZ88_RS09880 PF03830 PTS system sorbose subfamily IIB component LFZ88_RS09885 PF03609 PTS system sorbose-specific iic component LFZ88_RS09890 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ88_RS09895 PF06173 Protein of unknown function (DUF986) LFZ88_RS09905 PF02659 Putative manganese efflux pump LFZ88_RS09910 PF13847 Methyltransferase domain LFZ88_RS09915 PF03717 Penicillin-binding Protein dimerisation domain LFZ88_RS09915 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS09920 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS09925 PF10736 Protein of unknown function (DUF2627) LFZ88_RS09930 PF13974 YebO-like protein LFZ88_RS09935 PF13998 MgrB protein LFZ88_RS09940 PF13996 YobH-like protein LFZ88_RS09945 PF09339 IclR helix-turn-helix domain LFZ88_RS09945 PF01614 Bacterial transcriptional regulator LFZ88_RS09950 PF07690 Major Facilitator Superfamily LFZ88_RS09955 PF01435 Peptidase family M48 LFZ88_RS09960 PF03572 Peptidase family S41 LFZ88_RS09960 PF00595 PDZ domain LFZ88_RS09960 PF11818 C-terminal domain of tail specific protease (DUF3340) LFZ88_RS09960 PF17804 Tail specific protease N-terminal domain LFZ88_RS09965 PF17516 ProQ C-terminal domain LFZ88_RS09965 PF04352 ProQ/FINO family LFZ88_RS09970 PF13185 GAF domain LFZ88_RS09975 PF04403 Paraquat-inducible protein A LFZ88_RS09980 PF02470 MlaD protein LFZ88_RS09985 PF01189 16S rRNA methyltransferase RsmB/F LFZ88_RS09985 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LFZ88_RS09985 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LFZ88_RS09990 PF07351 Protein of unknown function (DUF1480) LFZ88_RS09995 PF07358 Protein of unknown function (DUF1482) LFZ88_RS10000 PF00149 Calcineurin-like phosphoesterase LFZ88_RS10005 PF05364 Salmonella type III secretion SopE effector N-terminus LFZ88_RS10005 PF07487 SopE GEF domain LFZ88_RS10010 PF07166 Protein of unknown function (DUF1398) LFZ88_RS10050 PF00583 Acetyltransferase (GNAT) family LFZ88_RS10070 PF11799 impB/mucB/samB family C-terminal domain LFZ88_RS10070 PF00817 impB/mucB/samB family LFZ88_RS10070 PF13438 Domain of unknown function (DUF4113) LFZ88_RS10080 PF00892 EamA-like transporter family LFZ88_RS10095 PF02796 Helix-turn-helix domain of resolvase LFZ88_RS10095 PF00239 Resolvase, N terminal domain LFZ88_RS10105 PF02040 Arsenical pump membrane protein LFZ88_RS10120 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS10125 PF03335 Phage tail fibre repeat LFZ88_RS10125 PF07484 Phage Tail Collar Domain LFZ88_RS10150 PF10721 Protein of unknown function (DUF2514) LFZ88_RS10160 PF12684 PDDEXK-like domain of unknown function (DUF3799) LFZ88_RS10160 PF06630 Enterobacterial exodeoxyribonuclease VIII LFZ88_RS10170 PF10709 Protein of unknown function (DUF2511) LFZ88_RS10175 PF05425 Copper resistance protein D LFZ88_RS10180 PF04234 CopC domain LFZ88_RS10185 PF06440 DNA polymerase III, theta subunit LFZ88_RS10190 PF00795 Carbon-nitrogen hydrolase LFZ88_RS10195 PF00929 Exonuclease LFZ88_RS10200 PF00326 Prolyl oligopeptidase family LFZ88_RS10200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LFZ88_RS10205 PF04391 Protein of unknown function (DUF533) LFZ88_RS10210 PF13995 YebF-like protein LFZ88_RS10215 PF07130 YebG protein LFZ88_RS10220 PF02222 ATP-grasp domain LFZ88_RS10225 PF01081 KDPG and KHG aldolase LFZ88_RS10230 PF00920 Dehydratase family LFZ88_RS10235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFZ88_RS10235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFZ88_RS10245 PF01418 Helix-turn-helix domain, rpiR family LFZ88_RS10245 PF01380 SIS domain LFZ88_RS10250 PF02887 Pyruvate kinase, alpha/beta domain LFZ88_RS10250 PF00224 Pyruvate kinase, barrel domain LFZ88_RS10260 PF13333 Integrase core domain LFZ88_RS10260 PF00665 Integrase core domain LFZ88_RS10260 PF13276 HTH-like domain LFZ88_RS10265 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ88_RS10275 PF01551 Peptidase family M23 LFZ88_RS10275 PF08525 Opacity-associated protein A N-terminal motif LFZ88_RS10275 PF01476 LysM domain LFZ88_RS10280 PF01297 Zinc-uptake complex component A periplasmic LFZ88_RS10285 PF00005 ABC transporter LFZ88_RS10290 PF00950 ABC 3 transport family LFZ88_RS10295 PF05496 Holliday junction DNA helicase RuvB P-loop domain LFZ88_RS10295 PF17864 RuvB AAA lid domain LFZ88_RS10295 PF05491 RuvB C-terminal winged helix domain LFZ88_RS10300 PF07499 RuvA, C-terminal domain LFZ88_RS10300 PF01330 RuvA N terminal domain LFZ88_RS10315 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LFZ88_RS10320 PF02075 Crossover junction endodeoxyribonuclease RuvC LFZ88_RS10325 PF01709 Transcriptional regulator LFZ88_RS10330 PF00293 NUDIX domain LFZ88_RS10335 PF02938 GAD domain LFZ88_RS10335 PF01336 OB-fold nucleic acid binding domain LFZ88_RS10335 PF00152 tRNA synthetases class II (D, K and N) LFZ88_RS10340 PF00857 Isochorismatase family LFZ88_RS10345 PF01904 Protein of unknown function DUF72 LFZ88_RS10350 PF01124 MAPEG family LFZ88_RS10355 PF13649 Methyltransferase domain LFZ88_RS10360 PF08003 Protein of unknown function (DUF1698) LFZ88_RS10370 PF06185 YecM protein LFZ88_RS10375 PF00750 tRNA synthetases class I (R) LFZ88_RS10375 PF03485 Arginyl tRNA synthetase N terminal domain LFZ88_RS10375 PF05746 DALR anticodon binding domain LFZ88_RS10380 PF03717 Penicillin-binding Protein dimerisation domain LFZ88_RS10380 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS10390 PF06366 Flagellar protein FlhE LFZ88_RS10395 PF00771 FHIPEP family LFZ88_RS10400 PF01312 FlhB HrpN YscU SpaS Family LFZ88_RS10405 PF04344 Chemotaxis phosphatase, CheZ LFZ88_RS10410 PF00072 Response regulator receiver domain LFZ88_RS10415 PF01339 CheB methylesterase LFZ88_RS10415 PF00072 Response regulator receiver domain LFZ88_RS10420 PF03705 CheR methyltransferase, all-alpha domain LFZ88_RS10420 PF01739 CheR methyltransferase, SAM binding domain LFZ88_RS10425 PF00672 HAMP domain LFZ88_RS10425 PF02203 Tar ligand binding domain homologue LFZ88_RS10425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS10430 PF01584 CheW-like domain LFZ88_RS10435 PF01584 CheW-like domain LFZ88_RS10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS10435 PF01627 Hpt domain LFZ88_RS10435 PF09078 CheY binding LFZ88_RS10435 PF02895 Signal transducing histidine kinase, homodimeric domain LFZ88_RS10440 PF13677 Membrane MotB of proton-channel complex MotA/MotB LFZ88_RS10440 PF00691 OmpA family LFZ88_RS10445 PF01618 MotA/TolQ/ExbB proton channel family LFZ88_RS10450 PF05280 Flagellar transcriptional activator (FlhC) LFZ88_RS10455 PF05247 Flagellar transcriptional activator (FlhD) LFZ88_RS10460 PF00582 Universal stress protein family LFZ88_RS10465 PF00982 Glycosyltransferase family 20 LFZ88_RS10470 PF02358 Trehalose-phosphatase LFZ88_RS10475 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS10485 PF00210 Ferritin-like domain LFZ88_RS10495 PF13992 YecR-like lipoprotein LFZ88_RS10500 PF00210 Ferritin-like domain LFZ88_RS10505 PF10678 Protein of unknown function (DUF2492) LFZ88_RS10510 PF03222 Tryptophan/tyrosine permease family LFZ88_RS10515 PF02810 SEC-C motif LFZ88_RS10515 PF03695 Uncharacterised protein family (UPF0149) LFZ88_RS10550 PF01066 CDP-alcohol phosphatidyltransferase LFZ88_RS10555 PF08459 UvrC Helix-hairpin-helix N-terminal LFZ88_RS10555 PF02151 UvrB/uvrC motif LFZ88_RS10555 PF01541 GIY-YIG catalytic domain LFZ88_RS10560 PF00072 Response regulator receiver domain LFZ88_RS10560 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS10565 PF10769 Protein of unknown function (DUF2594) LFZ88_RS10570 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS10570 PF03472 Autoinducer binding domain LFZ88_RS10575 PF00005 ABC transporter LFZ88_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS10585 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS10595 PF02899 Phage integrase, N-terminal SAM-like domain LFZ88_RS10600 PF04539 Sigma-70 region 3 LFZ88_RS10600 PF04545 Sigma-70, region 4 LFZ88_RS10600 PF04542 Sigma-70 region 2 LFZ88_RS10610 PF00669 Bacterial flagellin N-terminal helical region LFZ88_RS10610 PF00700 Bacterial flagellin C-terminal helical region LFZ88_RS10610 PF08884 Flagellin D3 domain LFZ88_RS10615 PF07195 Flagellar hook-associated protein 2 C-terminus LFZ88_RS10615 PF07196 Flagellin hook IN motif LFZ88_RS10615 PF02465 Flagellar hook-associated protein 2 N-terminus LFZ88_RS10620 PF02561 Flagellar protein FliS LFZ88_RS10625 PF05400 Flagellar protein FliT LFZ88_RS10630 PF00128 Alpha amylase, catalytic domain LFZ88_RS10630 PF02806 Alpha amylase, C-terminal all-beta domain LFZ88_RS10635 PF13987 YedD-like protein LFZ88_RS10640 PF04143 Sulphur transport LFZ88_RS10645 PF01206 Sulfurtransferase TusA LFZ88_RS10655 PF02049 Flagellar hook-basal body complex protein FliE LFZ88_RS10660 PF08345 Flagellar M-ring protein C-terminal LFZ88_RS10660 PF01514 Secretory protein of YscJ/FliF family LFZ88_RS10665 PF14842 FliG N-terminal domain LFZ88_RS10665 PF14841 FliG middle domain LFZ88_RS10665 PF01706 FliG C-terminal domain LFZ88_RS10670 PF02108 Flagellar assembly protein FliH LFZ88_RS10675 PF18269 T3SS EscN ATPase C-terminal domain LFZ88_RS10675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS10680 PF02050 Flagellar FliJ protein LFZ88_RS10685 PF02120 Flagellar hook-length control protein FliK LFZ88_RS10690 PF03748 Flagellar basal body-associated protein FliL LFZ88_RS10695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ88_RS10695 PF02154 Flagellar motor switch protein FliM LFZ88_RS10700 PF16973 Flagellar motor switch protein FliN N-terminal LFZ88_RS10700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ88_RS10705 PF04347 Flagellar biosynthesis protein, FliO LFZ88_RS10710 PF00813 FliP family LFZ88_RS10715 PF01313 Bacterial export proteins, family 3 LFZ88_RS10720 PF01311 Bacterial export proteins, family 1 LFZ88_RS10725 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS10730 PF10781 Dextransucrase DSRB LFZ88_RS10735 PF10733 Protein of unknown function (DUF2525) LFZ88_RS10745 PF17151 Periplasmic sensor domain LFZ88_RS10745 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS10750 PF09926 Uncharacterized small protein (DUF2158) LFZ88_RS10755 PF05661 Protein of unknown function (DUF808) LFZ88_RS10760 PF00892 EamA-like transporter family LFZ88_RS10765 PF03852 DNA mismatch endonuclease Vsr LFZ88_RS10770 PF18284 DNA methylase N-terminal domain LFZ88_RS10770 PF00145 C-5 cytosine-specific DNA methylase LFZ88_RS10775 PF01966 HD domain LFZ88_RS10790 PF00267 Gram-negative porin LFZ88_RS10800 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS10805 PF13438 Domain of unknown function (DUF4113) LFZ88_RS10805 PF00817 impB/mucB/samB family LFZ88_RS10805 PF11799 impB/mucB/samB family C-terminal domain LFZ88_RS10810 PF00717 Peptidase S24-like LFZ88_RS10825 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS10845 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS10855 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LFZ88_RS10860 PF04865 Baseplate J-like protein LFZ88_RS10905 PF17482 Phage tail sheath C-terminal domain LFZ88_RS10905 PF04984 Phage tail sheath protein subtilisin-like domain LFZ88_RS10945 PF00574 Clp protease LFZ88_RS10950 PF04860 Phage portal protein LFZ88_RS10955 PF03354 Phage Terminase LFZ88_RS10975 PF03245 Bacteriophage Rz lysis protein LFZ88_RS10980 PF00182 Chitinase class I LFZ88_RS10995 PF03589 Antitermination protein LFZ88_RS11005 PF06147 Protein of unknown function (DUF968) LFZ88_RS11015 PF05866 Endodeoxyribonuclease RusA LFZ88_RS11020 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFZ88_RS11025 PF06069 PerC transcriptional activator LFZ88_RS11040 PF10549 ORF11CD3 domain LFZ88_RS11040 PF09669 Phage regulatory protein Rha (Phage_pRha) LFZ88_RS11085 PF10065 Uncharacterized conserved protein (DUF2303) LFZ88_RS11130 PF06167 Glucose-regulated metallo-peptidase M90 LFZ88_RS11140 PF13356 Arm DNA-binding domain LFZ88_RS11140 PF00589 Phage integrase family LFZ88_RS11180 PF04461 Protein of unknown function (DUF520) LFZ88_RS11190 PF01048 Phosphorylase superfamily LFZ88_RS11190 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LFZ88_RS11205 PF01554 MatE LFZ88_RS11225 PF01758 Sodium Bile acid symporter family LFZ88_RS11230 PF02374 Anion-transporting ATPase LFZ88_RS11235 PF06953 Arsenical resistance operon trans-acting repressor ArsD LFZ88_RS11240 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFZ88_RS11245 PF01022 Bacterial regulatory protein, arsR family LFZ88_RS11255 PF03734 L,D-transpeptidase catalytic domain LFZ88_RS11255 PF17969 L,D-transpeptidase C-terminal domain LFZ88_RS11260 PF02277 Phosphoribosyltransferase LFZ88_RS11265 PF02654 Cobalamin-5-phosphate synthase LFZ88_RS11270 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LFZ88_RS11275 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFZ88_RS11280 PF00005 ABC transporter LFZ88_RS11285 PF02361 Cobalt transport protein LFZ88_RS11290 PF02553 Cobalt transport protein component CbiN LFZ88_RS11295 PF01891 Cobalt uptake substrate-specific transmembrane region LFZ88_RS11300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS11305 PF06180 Cobalt chelatase (CbiK) LFZ88_RS11310 PF02571 Precorrin-6x reductase CbiJ/CobK LFZ88_RS11315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS11320 PF11761 Cobalamin biosynthesis central region LFZ88_RS11320 PF11760 Cobalamin synthesis G N-terminal LFZ88_RS11320 PF01890 Cobalamin synthesis G C-terminus LFZ88_RS11325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS11330 PF05175 Methyltransferase small domain LFZ88_RS11335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS11340 PF01888 CbiD LFZ88_RS11345 PF02570 Precorrin-8X methylmutase LFZ88_RS11350 PF03186 CobD/Cbib protein LFZ88_RS11360 PF10114 Sensory domain found in PocR LFZ88_RS11360 PF12833 Helix-turn-helix domain LFZ88_RS11365 PF00230 Major intrinsic protein LFZ88_RS11370 PF00936 BMC domain LFZ88_RS11375 PF00936 BMC domain LFZ88_RS11380 PF02286 Dehydratase large subunit LFZ88_RS11385 PF02288 Dehydratase medium subunit LFZ88_RS11390 PF02287 Dehydratase small subunit LFZ88_RS11395 PF18427 DD-reactivating factor swiveling domain LFZ88_RS11395 PF08841 Diol dehydratase reactivase ATPase-like domain LFZ88_RS11405 PF00936 BMC domain LFZ88_RS11410 PF00936 BMC domain LFZ88_RS11415 PF06130 Phosphate propanoyltransferase LFZ88_RS11425 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFZ88_RS11430 PF01923 Cobalamin adenosyltransferase LFZ88_RS11435 PF00171 Aldehyde dehydrogenase family LFZ88_RS11440 PF00171 Aldehyde dehydrogenase family LFZ88_RS11440 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS11445 PF12838 4Fe-4S dicluster domain LFZ88_RS11445 PF10531 SLBB domain LFZ88_RS11445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ88_RS11445 PF13375 RnfC Barrel sandwich hybrid domain LFZ88_RS11455 PF00936 BMC domain LFZ88_RS11460 PF10662 Ethanolamine utilisation - propanediol utilisation LFZ88_RS11465 PF00871 Acetokinase family LFZ88_RS11470 PF00288 GHMP kinases N terminal domain LFZ88_RS11475 PF04363 Protein of unknown function (DUF496) LFZ88_RS11480 PF04632 Fusaric acid resistance protein family LFZ88_RS11490 PF06445 GyrI-like small molecule binding domain LFZ88_RS11495 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ88_RS11495 PF07943 Penicillin-binding protein 5, C-terminal domain LFZ88_RS11500 PF01292 Prokaryotic cytochrome b561 LFZ88_RS11505 PF12800 4Fe-4S binding domain LFZ88_RS11505 PF13247 4Fe-4S dicluster domain LFZ88_RS11510 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS11510 PF00384 Molybdopterin oxidoreductase LFZ88_RS11510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS11515 PF01906 Putative heavy-metal-binding LFZ88_RS11525 PF13981 SopA-like central domain LFZ88_RS11525 PF13979 SopA-like catalytic domain LFZ88_RS11530 PF00929 Exonuclease LFZ88_RS11530 PF08411 Exonuclease C-terminal LFZ88_RS11535 PF13520 Amino acid permease LFZ88_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS11540 PF03466 LysR substrate binding domain LFZ88_RS11545 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS11555 PF08029 HisG, C-terminal domain LFZ88_RS11555 PF01634 ATP phosphoribosyltransferase LFZ88_RS11560 PF00815 Histidinol dehydrogenase LFZ88_RS11565 PF00155 Aminotransferase class I and II LFZ88_RS11570 PF00475 Imidazoleglycerol-phosphate dehydratase LFZ88_RS11575 PF00117 Glutamine amidotransferase class-I LFZ88_RS11580 PF00977 Histidine biosynthesis protein LFZ88_RS11585 PF00977 Histidine biosynthesis protein LFZ88_RS11590 PF01502 Phosphoribosyl-AMP cyclohydrolase LFZ88_RS11590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFZ88_RS11595 PF02706 Chain length determinant protein LFZ88_RS11600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFZ88_RS11600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFZ88_RS11610 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFZ88_RS11610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ88_RS11620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ88_RS11620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ88_RS11620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ88_RS11620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ88_RS11625 PF00483 Nucleotidyl transferase LFZ88_RS11625 PF01050 Mannose-6-phosphate isomerase LFZ88_RS11630 PF13439 Glycosyltransferase Family 4 LFZ88_RS11630 PF00534 Glycosyl transferases group 1 LFZ88_RS11635 PF13439 Glycosyltransferase Family 4 LFZ88_RS11635 PF00534 Glycosyl transferases group 1 LFZ88_RS11640 PF04932 O-Antigen ligase LFZ88_RS11645 PF00535 Glycosyl transferase family 2 LFZ88_RS11655 PF00535 Glycosyl transferase family 2 LFZ88_RS11665 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS11670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFZ88_RS11675 PF16363 GDP-mannose 4,6 dehydratase LFZ88_RS11680 PF00483 Nucleotidyl transferase LFZ88_RS11685 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS11685 PF00970 Oxidoreductase FAD-binding domain LFZ88_RS11685 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS11690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFZ88_RS11695 PF00483 Nucleotidyl transferase LFZ88_RS11700 PF04321 RmlD substrate binding domain LFZ88_RS11705 PF16363 GDP-mannose 4,6 dehydratase LFZ88_RS11710 PF00483 Nucleotidyl transferase LFZ88_RS11720 PF00534 Glycosyl transferases group 1 LFZ88_RS11720 PF13439 Glycosyltransferase Family 4 LFZ88_RS11725 PF04230 Polysaccharide pyruvyl transferase LFZ88_RS11735 PF02397 Bacterial sugar transferase LFZ88_RS11740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ88_RS11740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ88_RS11740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ88_RS11740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ88_RS11745 PF00483 Nucleotidyl transferase LFZ88_RS11745 PF01050 Mannose-6-phosphate isomerase LFZ88_RS11750 PF13579 Glycosyl transferase 4-like domain LFZ88_RS11750 PF00534 Glycosyl transferases group 1 LFZ88_RS11755 PF00293 NUDIX domain LFZ88_RS11760 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS11765 PF16363 GDP-mannose 4,6 dehydratase LFZ88_RS11770 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS11775 PF00535 Glycosyl transferase family 2 LFZ88_RS11785 PF00534 Glycosyl transferases group 1 LFZ88_RS11785 PF13439 Glycosyltransferase Family 4 LFZ88_RS11790 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS11795 PF00535 Glycosyl transferase family 2 LFZ88_RS11800 PF13807 G-rich domain on putative tyrosine kinase LFZ88_RS11800 PF02706 Chain length determinant protein LFZ88_RS11800 PF13614 AAA domain LFZ88_RS11805 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFZ88_RS11810 PF02563 Polysaccharide biosynthesis/export protein LFZ88_RS11810 PF10531 SLBB domain LFZ88_RS11810 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LFZ88_RS11820 PF00571 CBS domain LFZ88_RS11820 PF03471 Transporter associated domain LFZ88_RS11820 PF03741 Integral membrane protein TerC family LFZ88_RS11825 PF05170 AsmA family LFZ88_RS11830 PF00692 dUTPase LFZ88_RS11835 PF00485 Phosphoribulokinase / Uridine kinase family LFZ88_RS11840 PF13426 PAS domain LFZ88_RS11840 PF08448 PAS fold LFZ88_RS11840 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS11840 PF05231 MASE1 LFZ88_RS11840 PF00563 EAL domain LFZ88_RS11840 PF08447 PAS fold LFZ88_RS11845 PF06029 AlkA N-terminal domain LFZ88_RS11845 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ88_RS11855 PF00012 Hsp70 protein LFZ88_RS11860 PF13533 Biotin-lipoyl like LFZ88_RS11865 PF00873 AcrB/AcrD/AcrF family LFZ88_RS11870 PF00873 AcrB/AcrD/AcrF family LFZ88_RS11875 PF07690 Major Facilitator Superfamily LFZ88_RS11880 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS11880 PF00672 HAMP domain LFZ88_RS11885 PF00072 Response regulator receiver domain LFZ88_RS11885 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS11925 PF01609 Transposase DDE domain LFZ88_RS11925 PF13808 DDE_Tnp_1-associated LFZ88_RS11945 PF01136 Peptidase family U32 LFZ88_RS11945 PF16325 Peptidase family U32 C-terminal domain LFZ88_RS11955 PF05932 Tir chaperone protein (CesT) family LFZ88_RS11965 PF00781 Diacylglycerol kinase catalytic domain LFZ88_RS11970 PF01791 DeoC/LacD family aldolase LFZ88_RS11975 PF03825 Nucleoside H+ symporter LFZ88_RS11980 PF03747 ADP-ribosylglycohydrolase LFZ88_RS11985 PF00294 pfkB family carbohydrate kinase LFZ88_RS11990 PF07702 UTRA domain LFZ88_RS11990 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS11995 PF08543 Phosphomethylpyrimidine kinase LFZ88_RS12000 PF02110 Hydroxyethylthiazole kinase family LFZ88_RS12005 PF11776 Nickel/cobalt transporter regulator LFZ88_RS12010 PF00419 Fimbrial protein LFZ88_RS12015 PF00577 Outer membrane usher protein LFZ88_RS12015 PF13953 PapC C-terminal domain LFZ88_RS12015 PF13954 PapC N-terminal domain LFZ88_RS12020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS12020 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS12035 PF10609 NUBPL iron-transfer P-loop NTPase LFZ88_RS12040 PF09334 tRNA synthetases class I (M) LFZ88_RS12040 PF01588 Putative tRNA binding domain LFZ88_RS12045 PF06998 Protein of unknown function (DUF1307) LFZ88_RS12055 PF07308 Protein of unknown function (DUF1456) LFZ88_RS12060 PF00072 Response regulator receiver domain LFZ88_RS12060 PF04397 LytTr DNA-binding domain LFZ88_RS12065 PF06580 Histidine kinase LFZ88_RS12065 PF07694 5TMR of 5TMR-LYT LFZ88_RS12070 PF13411 MerR HTH family regulatory protein LFZ88_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS12085 PF00005 ABC transporter LFZ88_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS12095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ88_RS12100 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFZ88_RS12100 PF14310 Fibronectin type III-like domain LFZ88_RS12100 PF00933 Glycosyl hydrolase family 3 N terminal domain LFZ88_RS12105 PF09330 D-lactate dehydrogenase, membrane binding LFZ88_RS12105 PF01565 FAD binding domain LFZ88_RS12110 PF00768 D-alanyl-D-alanine carboxypeptidase LFZ88_RS12120 PF04893 Yip1 domain LFZ88_RS12125 PF09335 SNARE associated Golgi protein LFZ88_RS12135 PF02321 Outer membrane efflux protein LFZ88_RS12145 PF01207 Dihydrouridine synthase (Dus) LFZ88_RS12150 PF01494 FAD binding domain LFZ88_RS12155 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS12155 PF14497 Glutathione S-transferase, C-terminal domain LFZ88_RS12160 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFZ88_RS12165 PF07883 Cupin domain LFZ88_RS12170 PF07690 Major Facilitator Superfamily LFZ88_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS12175 PF03466 LysR substrate binding domain LFZ88_RS12180 PF03788 LrgA family LFZ88_RS12185 PF04172 LrgB-like family LFZ88_RS12190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ88_RS12190 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LFZ88_RS12195 PF02698 DUF218 domain LFZ88_RS12200 PF10808 Protein of unknown function (DUF2542) LFZ88_RS12205 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ88_RS12205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS12210 PF01180 Dihydroorotate dehydrogenase LFZ88_RS12215 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS12220 PF00005 ABC transporter LFZ88_RS12225 PF13407 Periplasmic binding protein domain LFZ88_RS12230 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS12235 PF04235 Protein of unknown function (DUF418) LFZ88_RS12240 PF01227 GTP cyclohydrolase I LFZ88_RS12250 PF00756 Putative esterase LFZ88_RS12260 PF03315 Serine dehydratase beta chain LFZ88_RS12260 PF03313 Serine dehydratase alpha chain LFZ88_RS12265 PF18429 Domain of unknown function (DUF5609) LFZ88_RS12270 PF07690 Major Facilitator Superfamily LFZ88_RS12275 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS12275 PF00593 TonB dependent receptor LFZ88_RS12285 PF00324 Amino acid permease LFZ88_RS12290 PF03466 LysR substrate binding domain LFZ88_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS12295 PF03601 Conserved hypothetical protein 698 LFZ88_RS12300 PF01261 Xylose isomerase-like TIM barrel LFZ88_RS12305 PF02378 Phosphotransferase system, EIIC LFZ88_RS12305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS12310 PF00294 pfkB family carbohydrate kinase LFZ88_RS12315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS12315 PF00381 PTS HPr component phosphorylation site LFZ88_RS12320 PF07690 Major Facilitator Superfamily LFZ88_RS12330 PF03692 Putative zinc- or iron-chelating domain LFZ88_RS12335 PF01132 Elongation factor P (EF-P) OB domain LFZ88_RS12335 PF08207 Elongation factor P (EF-P) KOW-like domain LFZ88_RS12335 PF09285 Elongation factor P, C-terminal LFZ88_RS12340 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ88_RS12340 PF07683 Cobalamin synthesis protein cobW C-terminal domain LFZ88_RS12345 PF01569 PAP2 superfamily LFZ88_RS12355 PF00877 NlpC/P60 family LFZ88_RS12365 PF00563 EAL domain LFZ88_RS12365 PF12792 CSS motif domain associated with EAL LFZ88_RS12370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS12380 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS12380 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS12385 PF00005 ABC transporter LFZ88_RS12385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS12390 PF13989 YejG-like protein LFZ88_RS12400 PF07690 Major Facilitator Superfamily LFZ88_RS12405 PF01479 S4 domain LFZ88_RS12405 PF00849 RNA pseudouridylate synthase LFZ88_RS12410 PF04851 Type III restriction enzyme, res subunit LFZ88_RS12410 PF00271 Helicase conserved C-terminal domain LFZ88_RS12415 PF01386 Ribosomal L25p family LFZ88_RS12425 PF04245 37-kD nucleoid-associated bacterial protein LFZ88_RS12430 PF07208 Protein of unknown function (DUF1414) LFZ88_RS12435 PF00884 Sulfatase LFZ88_RS12435 PF11893 Domain of unknown function (DUF3413) LFZ88_RS12455 PF12468 Type III secretion system leucine rich repeat protein LFZ88_RS12455 PF14496 C-terminal novel E3 ligase, LRR-interacting LFZ88_RS12465 PF07484 Phage Tail Collar Domain LFZ88_RS12465 PF03335 Phage tail fibre repeat LFZ88_RS12465 PF08400 Prophage tail fibre N-terminal LFZ88_RS12485 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS12485 PF00072 Response regulator receiver domain LFZ88_RS12490 PF03918 Cytochrome C biogenesis protein LFZ88_RS12495 PF08534 Redoxin LFZ88_RS12500 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ88_RS12500 PF01578 Cytochrome C assembly protein LFZ88_RS12505 PF03100 CcmE LFZ88_RS12510 PF04995 Heme exporter protein D (CcmD) LFZ88_RS12515 PF01578 Cytochrome C assembly protein LFZ88_RS12520 PF03379 CcmB protein LFZ88_RS12525 PF00005 ABC transporter LFZ88_RS12530 PF03264 NapC/NirT cytochrome c family, N-terminal region LFZ88_RS12535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LFZ88_RS12540 PF12801 4Fe-4S binding domain LFZ88_RS12540 PF13237 4Fe-4S dicluster domain LFZ88_RS12545 PF12838 4Fe-4S dicluster domain LFZ88_RS12545 PF12800 4Fe-4S binding domain LFZ88_RS12550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS12550 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS12550 PF00384 Molybdopterin oxidoreductase LFZ88_RS12555 PF03927 NapD protein LFZ88_RS12560 PF13187 4Fe-4S dicluster domain LFZ88_RS12560 PF12800 4Fe-4S binding domain LFZ88_RS12560 PF00037 4Fe-4S binding domain LFZ88_RS12565 PF03974 Ecotin LFZ88_RS12570 PF00005 ABC transporter LFZ88_RS12575 PF13532 2OG-Fe(II) oxygenase superfamily LFZ88_RS12580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFZ88_RS12580 PF12833 Helix-turn-helix domain LFZ88_RS12580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFZ88_RS12580 PF02805 Metal binding domain of Ada LFZ88_RS12585 PF02424 ApbE family LFZ88_RS12590 PF00267 Gram-negative porin LFZ88_RS12600 PF16359 RcsD-ABL domain LFZ88_RS12600 PF01627 Hpt domain LFZ88_RS12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS12605 PF00072 Response regulator receiver domain LFZ88_RS12605 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS12610 PF00072 Response regulator receiver domain LFZ88_RS12610 PF09456 RcsC Alpha-Beta-Loop (ABL) LFZ88_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS12610 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS12615 PF03989 DNA gyrase C-terminal domain, beta-propeller LFZ88_RS12615 PF00521 DNA gyrase/topoisomerase IV, subunit A LFZ88_RS12625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS12625 PF13378 Enolase C-terminal domain-like LFZ88_RS12630 PF07690 Major Facilitator Superfamily LFZ88_RS12645 PF00317 Ribonucleotide reductase, all-alpha domain LFZ88_RS12645 PF02867 Ribonucleotide reductase, barrel domain LFZ88_RS12645 PF03477 ATP cone domain LFZ88_RS12650 PF00268 Ribonucleotide reductase, small chain LFZ88_RS12655 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS12660 PF07690 Major Facilitator Superfamily LFZ88_RS12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS12665 PF03466 LysR substrate binding domain LFZ88_RS12670 PF03009 Glycerophosphoryl diester phosphodiesterase family LFZ88_RS12675 PF07690 Major Facilitator Superfamily LFZ88_RS12680 PF01266 FAD dependent oxidoreductase LFZ88_RS12680 PF04324 BFD-like [2Fe-2S] binding domain LFZ88_RS12685 PF00890 FAD binding domain LFZ88_RS12690 PF13183 4Fe-4S dicluster domain LFZ88_RS12690 PF02754 Cysteine-rich domain LFZ88_RS12705 PF00994 Probable molybdopterin binding domain LFZ88_RS12710 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS12715 PF07690 Major Facilitator Superfamily LFZ88_RS12720 PF13378 Enolase C-terminal domain-like LFZ88_RS12720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS12725 PF09339 IclR helix-turn-helix domain LFZ88_RS12725 PF01614 Bacterial transcriptional regulator LFZ88_RS12730 PF00994 Probable molybdopterin binding domain LFZ88_RS12735 PF07437 YfaZ precursor LFZ88_RS12740 PF00293 NUDIX domain LFZ88_RS12745 PF00300 Histidine phosphatase superfamily (branch 1) LFZ88_RS12750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFZ88_RS12755 PF00535 Glycosyl transferase family 2 LFZ88_RS12760 PF00551 Formyl transferase LFZ88_RS12760 PF02911 Formyl transferase, C-terminal domain LFZ88_RS12760 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS12765 PF01522 Polysaccharide deacetylase LFZ88_RS12770 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LFZ88_RS12775 PF00892 EamA-like transporter family LFZ88_RS12790 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS12790 PF00501 AMP-binding enzyme LFZ88_RS12795 PF13378 Enolase C-terminal domain-like LFZ88_RS12800 PF00378 Enoyl-CoA hydratase/isomerase LFZ88_RS12805 PF12697 Alpha/beta hydrolase family LFZ88_RS12810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS12810 PF16582 Middle domain of thiamine pyrophosphate LFZ88_RS12810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS12815 PF00425 chorismate binding enzyme LFZ88_RS12820 PF05957 Bacterial protein of unknown function (DUF883) LFZ88_RS12825 PF13673 Acetyltransferase (GNAT) domain LFZ88_RS12830 PF12706 Beta-lactamase superfamily domain LFZ88_RS12835 PF00072 Response regulator receiver domain LFZ88_RS12835 PF01584 CheW-like domain LFZ88_RS12840 PF12034 Domain of unknown function (DUF3520) LFZ88_RS12840 PF00092 von Willebrand factor type A domain LFZ88_RS12840 PF12450 von Willebrand factor LFZ88_RS12845 PF00361 Proton-conducting membrane transporter LFZ88_RS12850 PF00361 Proton-conducting membrane transporter LFZ88_RS12855 PF00361 Proton-conducting membrane transporter LFZ88_RS12855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFZ88_RS12860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFZ88_RS12865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LFZ88_RS12870 PF12838 4Fe-4S dicluster domain LFZ88_RS12875 PF00146 NADH dehydrogenase LFZ88_RS12880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFZ88_RS12880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS12880 PF00384 Molybdopterin oxidoreductase LFZ88_RS12880 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS12885 PF10531 SLBB domain LFZ88_RS12885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFZ88_RS12885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFZ88_RS12895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFZ88_RS12895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFZ88_RS12900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ88_RS12905 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LFZ88_RS12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS12910 PF03466 LysR substrate binding domain LFZ88_RS12920 PF00155 Aminotransferase class I and II LFZ88_RS12930 PF02080 TrkA-C domain LFZ88_RS12930 PF03600 Citrate transporter LFZ88_RS12935 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS12940 PF03887 YfbU domain LFZ88_RS12945 PF04217 Protein of unknown function, DUF412 LFZ88_RS12950 PF00871 Acetokinase family LFZ88_RS12955 PF07085 DRTGG domain LFZ88_RS12955 PF01515 Phosphate acetyl/butaryl transferase LFZ88_RS12960 PF03606 C4-dicarboxylate anaerobic carrier LFZ88_RS12965 PF02780 Transketolase, C-terminal domain LFZ88_RS12965 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS12965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFZ88_RS12970 PF00456 Transketolase, thiamine diphosphate binding domain LFZ88_RS12975 PF03611 PTS system sugar-specific permease component LFZ88_RS12985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS12995 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS13000 PF00293 NUDIX domain LFZ88_RS13005 PF12850 Calcineurin-like phosphoesterase superfamily domain LFZ88_RS13010 PF14834 Glutathione S-transferase, C-terminal domain LFZ88_RS13010 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS13015 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS13015 PF00043 Glutathione S-transferase, C-terminal domain LFZ88_RS13020 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS13020 PF08338 Domain of unknown function (DUF1731) LFZ88_RS13025 PF00005 ABC transporter LFZ88_RS13030 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS13040 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS13045 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS13055 PF02441 Flavoprotein LFZ88_RS13060 PF00324 Amino acid permease LFZ88_RS13065 PF01168 Alanine racemase, N-terminal domain LFZ88_RS13070 PF13520 Amino acid permease LFZ88_RS13075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ88_RS13075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFZ88_RS13080 PF00158 Sigma-54 interaction domain LFZ88_RS13080 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS13080 PF13426 PAS domain LFZ88_RS13085 PF00156 Phosphoribosyl transferase domain LFZ88_RS13090 PF02674 Colicin V production protein LFZ88_RS13095 PF05036 Sporulation related domain LFZ88_RS13100 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS13100 PF08245 Mur ligase middle domain LFZ88_RS13105 PF01039 Carboxyl transferase domain LFZ88_RS13105 PF17848 Acetyl-coA carboxylase zinc finger domain LFZ88_RS13110 PF09335 SNARE associated Golgi protein LFZ88_RS13115 PF01416 tRNA pseudouridine synthase LFZ88_RS13120 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ88_RS13120 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ88_RS13125 PF11890 Domain of unknown function (DUF3410) LFZ88_RS13125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ88_RS13125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ88_RS13135 PF07690 Major Facilitator Superfamily LFZ88_RS13145 PF13693 Winged helix-turn-helix DNA-binding LFZ88_RS13160 PF02517 CPBP intramembrane metalloprotease LFZ88_RS13165 PF00109 Beta-ketoacyl synthase, N-terminal domain LFZ88_RS13165 PF02801 Beta-ketoacyl synthase, C-terminal domain LFZ88_RS13170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LFZ88_RS13170 PF01266 FAD dependent oxidoreductase LFZ88_RS13175 PF08891 YfcL protein LFZ88_RS13180 PF04315 Elongation factor P hydroxylase LFZ88_RS13185 PF01925 Sulfite exporter TauE/SafE LFZ88_RS13190 PF03411 Penicillin-insensitive murein endopeptidase LFZ88_RS13195 PF01264 Chorismate synthase LFZ88_RS13200 PF05175 Methyltransferase small domain LFZ88_RS13205 PF01713 Smr domain LFZ88_RS13210 PF00300 Histidine phosphatase superfamily (branch 1) LFZ88_RS13215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFZ88_RS13215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFZ88_RS13215 PF00378 Enoyl-CoA hydratase/isomerase LFZ88_RS13220 PF02803 Thiolase, C-terminal domain LFZ88_RS13220 PF00108 Thiolase, N-terminal domain LFZ88_RS13225 PF04175 Protein of unknown function (DUF406) LFZ88_RS13230 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LFZ88_RS13235 PF04333 MlaA lipoprotein LFZ88_RS13240 PF01226 Formate/nitrite transporter LFZ88_RS13250 PF01278 Omptin family LFZ88_RS13255 PF14532 Sigma-54 interaction domain LFZ88_RS13255 PF00072 Response regulator receiver domain LFZ88_RS13255 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS13260 PF00672 HAMP domain LFZ88_RS13260 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS13275 PF07690 Major Facilitator Superfamily LFZ88_RS13285 PF10810 Protein of unknown function (DUF2545) LFZ88_RS13290 PF03279 Bacterial lipid A biosynthesis acyltransferase LFZ88_RS13295 PF00155 Aminotransferase class I and II LFZ88_RS13305 PF02685 Glucokinase LFZ88_RS13320 PF00248 Aldo/keto reductase family LFZ88_RS13325 PF10697 Protein of unknown function (DUF2502) LFZ88_RS13330 PF01566 Natural resistance-associated macrophage protein LFZ88_RS13335 PF07670 Nucleoside recognition LFZ88_RS13335 PF07662 Na+ dependent nucleoside transporter C-terminus LFZ88_RS13335 PF01773 Na+ dependent nucleoside transporter N-terminus LFZ88_RS13340 PF05231 MASE1 LFZ88_RS13340 PF00563 EAL domain LFZ88_RS13360 PF07037 Putative transcription regulator (DUF1323) LFZ88_RS13365 PF07037 Putative transcription regulator (DUF1323) LFZ88_RS13370 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFZ88_RS13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS13400 PF03466 LysR substrate binding domain LFZ88_RS13410 PF03825 Nucleoside H+ symporter LFZ88_RS13415 PF01048 Phosphorylase superfamily LFZ88_RS13420 PF03502 Nucleoside-specific channel-forming protein, Tsx LFZ88_RS13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS13425 PF03466 LysR substrate binding domain LFZ88_RS13430 PF13593 SBF-like CPA transporter family (DUF4137) LFZ88_RS13435 PF12843 Putative quorum-sensing-regulated virulence factor LFZ88_RS13440 PF00533 BRCA1 C Terminus (BRCT) domain LFZ88_RS13440 PF03120 NAD-dependent DNA ligase OB-fold domain LFZ88_RS13440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LFZ88_RS13440 PF12826 Helix-hairpin-helix motif LFZ88_RS13440 PF01653 NAD-dependent DNA ligase adenylation domain LFZ88_RS13445 PF04354 ZipA, C-terminal FtsZ-binding domain LFZ88_RS13460 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS13465 PF00381 PTS HPr component phosphorylation site LFZ88_RS13470 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ88_RS13470 PF00391 PEP-utilising enzyme, mobile domain LFZ88_RS13470 PF05524 PEP-utilising enzyme, N-terminal LFZ88_RS13475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LFZ88_RS13485 PF08543 Phosphomethylpyrimidine kinase LFZ88_RS13490 PF00155 Aminotransferase class I and II LFZ88_RS13490 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS13495 PF00117 Glutamine amidotransferase class-I LFZ88_RS13500 PF17263 Family of unknown function (DUF5329) LFZ88_RS13505 PF00912 Transglycosylase LFZ88_RS13515 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS13520 PF00005 ABC transporter LFZ88_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS13530 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS13545 PF04261 Dyp-type peroxidase family LFZ88_RS13550 PF06572 Protein of unknown function (DUF1131) LFZ88_RS13555 PF11143 Protein of unknown function (DUF2919) LFZ88_RS13560 PF00583 Acetyltransferase (GNAT) family LFZ88_RS13565 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ88_RS13570 PF01218 Coproporphyrinogen III oxidase LFZ88_RS13580 PF12833 Helix-turn-helix domain LFZ88_RS13585 PF16365 Ethanolamine utilization protein EutK C-terminus LFZ88_RS13585 PF00936 BMC domain LFZ88_RS13590 PF00936 BMC domain LFZ88_RS13595 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LFZ88_RS13600 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LFZ88_RS13605 PF06277 Ethanolamine utilisation protein EutA LFZ88_RS13610 PF04346 Ethanolamine utilisation protein, EutH LFZ88_RS13615 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS13625 PF00171 Aldehyde dehydrogenase family LFZ88_RS13630 PF03319 Ethanolamine utilisation protein EutN/carboxysome LFZ88_RS13635 PF00936 BMC domain LFZ88_RS13640 PF01515 Phosphate acetyl/butaryl transferase LFZ88_RS13645 PF01923 Cobalamin adenosyltransferase LFZ88_RS13650 PF06249 Ethanolamine utilisation protein EutQ LFZ88_RS13655 PF10662 Ethanolamine utilisation - propanediol utilisation LFZ88_RS13660 PF00936 BMC domain LFZ88_RS13665 PF01515 Phosphate acetyl/butaryl transferase LFZ88_RS13665 PF03949 Malic enzyme, NAD binding domain LFZ88_RS13665 PF00390 Malic enzyme, N-terminal domain LFZ88_RS13675 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ88_RS13680 PF00456 Transketolase, thiamine diphosphate binding domain LFZ88_RS13680 PF02780 Transketolase, C-terminal domain LFZ88_RS13680 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS13690 PF06674 Protein of unknown function (DUF1176) LFZ88_RS13695 PF00293 NUDIX domain LFZ88_RS13700 PF00144 Beta-lactamase LFZ88_RS13705 PF13247 4Fe-4S dicluster domain LFZ88_RS13705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ88_RS13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS13710 PF00672 HAMP domain LFZ88_RS13710 PF07730 Histidine kinase LFZ88_RS13710 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LFZ88_RS13715 PF00873 AcrB/AcrD/AcrF family LFZ88_RS13720 PF03960 ArsC family LFZ88_RS13725 PF01546 Peptidase family M20/M25/M40 LFZ88_RS13725 PF07687 Peptidase dimerisation domain LFZ88_RS13730 PF13980 Uncharacterised protein family (UPF0370) LFZ88_RS13735 PF08351 Domain of unknown function (DUF1726) LFZ88_RS13735 PF17176 tRNA-binding domain LFZ88_RS13735 PF05127 Helicase LFZ88_RS13735 PF13718 GNAT acetyltransferase 2 LFZ88_RS13740 PF04228 Putative neutral zinc metallopeptidase LFZ88_RS13745 PF01259 SAICAR synthetase LFZ88_RS13755 PF06804 NlpB/DapX lipoprotein LFZ88_RS13760 PF00701 Dihydrodipicolinate synthetase family LFZ88_RS13765 PF01842 ACT domain LFZ88_RS13770 PF00578 AhpC/TSA family LFZ88_RS13775 PF02595 Glycerate kinase family LFZ88_RS13780 PF02447 GntP family permease LFZ88_RS13785 PF17853 GGDEF-like domain LFZ88_RS13785 PF13556 PucR C-terminal helix-turn-helix domain LFZ88_RS13785 PF05651 Putative sugar diacid recognition LFZ88_RS13790 PF01594 AI-2E family transporter LFZ88_RS13795 PF01435 Peptidase family M48 LFZ88_RS13800 PF03960 ArsC family LFZ88_RS13805 PF00308 Bacterial dnaA protein LFZ88_RS13810 PF00860 Permease family LFZ88_RS13825 PF00586 AIR synthase related protein, N-terminal domain LFZ88_RS13825 PF02769 AIR synthase related protein, C-terminal domain LFZ88_RS13830 PF00551 Formyl transferase LFZ88_RS13835 PF13090 Polyphosphate kinase C-terminal domain 2 LFZ88_RS13835 PF17941 Polyphosphate kinase C-terminal domain 1 LFZ88_RS13835 PF02503 Polyphosphate kinase middle domain LFZ88_RS13835 PF13089 Polyphosphate kinase N-terminal domain LFZ88_RS13840 PF02541 Ppx/GppA phosphatase family LFZ88_RS13845 PF05231 MASE1 LFZ88_RS13845 PF00563 EAL domain LFZ88_RS13850 PF11119 Protein of unknown function (DUF2633) LFZ88_RS13870 PF00958 GMP synthase C terminal domain LFZ88_RS13870 PF02540 NAD synthase LFZ88_RS13870 PF00117 Glutamine amidotransferase class-I LFZ88_RS13875 PF00478 IMP dehydrogenase / GMP reductase domain LFZ88_RS13875 PF00571 CBS domain LFZ88_RS13880 PF02601 Exonuclease VII, large subunit LFZ88_RS13880 PF13742 OB-fold nucleic acid binding domain LFZ88_RS13885 PF03797 Autotransporter beta-domain LFZ88_RS13910 PF11924 Inverse autotransporter, beta-domain LFZ88_RS13910 PF02369 Bacterial Ig-like domain (group 1) LFZ88_RS13910 PF02368 Bacterial Ig-like domain (group 2) LFZ88_RS13910 PF07979 Intimin C-type lectin domain LFZ88_RS13910 PF01476 LysM domain LFZ88_RS13915 PF07191 zinc-ribbons LFZ88_RS13920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFZ88_RS13920 PF01926 50S ribosome-binding GTPase LFZ88_RS13925 PF13360 PQQ-like domain LFZ88_RS13930 PF09976 Tetratricopeptide repeat-like domain LFZ88_RS13935 PF03129 Anticodon binding domain LFZ88_RS13935 PF13393 Histidyl-tRNA synthetase LFZ88_RS13940 PF04551 GcpE protein LFZ88_RS13945 PF13464 Domain of unknown function (DUF4115) LFZ88_RS13955 PF04055 Radical SAM superfamily LFZ88_RS13960 PF00334 Nucleoside diphosphate kinase LFZ88_RS13975 PF12800 4Fe-4S binding domain LFZ88_RS13975 PF13247 4Fe-4S dicluster domain LFZ88_RS13980 PF00384 Molybdopterin oxidoreductase LFZ88_RS13980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS13980 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS13985 PF06832 Penicillin-Binding Protein C-terminus Family LFZ88_RS13985 PF00912 Transglycosylase LFZ88_RS13985 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS13990 PF01835 MG2 domain LFZ88_RS13990 PF00207 Alpha-2-macroglobulin family LFZ88_RS13990 PF07703 Alpha-2-macroglobulin bait region domain LFZ88_RS13990 PF07678 A-macroglobulin TED domain LFZ88_RS13990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LFZ88_RS13990 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LFZ88_RS13990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LFZ88_RS13990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LFZ88_RS13990 PF17962 Bacterial macroglobulin domain 6 LFZ88_RS13995 PF00581 Rhodanese-like domain LFZ88_RS14010 PF07179 SseB protein N-terminal domain LFZ88_RS14010 PF14581 SseB protein C-terminal domain LFZ88_RS14015 PF00883 Cytosol aminopeptidase family, catalytic domain LFZ88_RS14015 PF12404 Peptidase LFZ88_RS14020 PF04384 Iron-sulphur cluster assembly LFZ88_RS14025 PF00111 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS14030 PF00012 Hsp70 protein LFZ88_RS14035 PF07743 HSCB C-terminal oligomerisation domain LFZ88_RS14040 PF01521 Iron-sulphur cluster biosynthesis LFZ88_RS14045 PF01592 NifU-like N terminal domain LFZ88_RS14050 PF00266 Aminotransferase class-V LFZ88_RS14055 PF02082 Transcriptional regulator LFZ88_RS14060 PF00588 SpoU rRNA Methylase family LFZ88_RS14065 PF00459 Inositol monophosphatase family LFZ88_RS14070 PF12146 Serine aminopeptidase, S33 LFZ88_RS14075 PF17179 4Fe-4S dicluster domain LFZ88_RS14080 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS14080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LFZ88_RS14085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ88_RS14085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ88_RS14085 PF13187 4Fe-4S dicluster domain LFZ88_RS14090 PF03824 High-affinity nickel-transport protein LFZ88_RS14100 PF00874 PRD domain LFZ88_RS14105 PF12832 MFS_1 like family LFZ88_RS14110 PF00464 Serine hydroxymethyltransferase LFZ88_RS14115 PF00042 Globin LFZ88_RS14115 PF00970 Oxidoreductase FAD-binding domain LFZ88_RS14115 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS14120 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS14120 PF18500 CadC C-terminal domain 1 LFZ88_RS14125 PF13520 Amino acid permease LFZ88_RS14130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ88_RS14130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ88_RS14130 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ88_RS14135 PF00854 POT family LFZ88_RS14140 PF00543 Nitrogen regulatory protein P-II LFZ88_RS14145 PF00072 Response regulator receiver domain LFZ88_RS14145 PF00158 Sigma-54 interaction domain LFZ88_RS14150 PF13942 YfhG lipoprotein LFZ88_RS14155 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS14160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LFZ88_RS14160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LFZ88_RS14160 PF02769 AIR synthase related protein, C-terminal domain LFZ88_RS14170 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS14170 PF01464 Transglycosylase SLT domain LFZ88_RS14175 PF14437 MafB19-like deaminase LFZ88_RS14185 PF00367 phosphotransferase system, EIIB LFZ88_RS14185 PF02378 Phosphotransferase system, EIIC LFZ88_RS14190 PF01380 SIS domain LFZ88_RS14195 PF01380 SIS domain LFZ88_RS14195 PF01418 Helix-turn-helix domain, rpiR family LFZ88_RS14200 PF02558 Ketopantoate reductase PanE/ApbA LFZ88_RS14200 PF08546 Ketopantoate reductase PanE/ApbA C terminal LFZ88_RS14205 PF07690 Major Facilitator Superfamily LFZ88_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS14210 PF03466 LysR substrate binding domain LFZ88_RS14215 PF12838 4Fe-4S dicluster domain LFZ88_RS14220 PF01648 4'-phosphopantetheinyl transferase superfamily LFZ88_RS14225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LFZ88_RS14230 PF11967 Recombination protein O N terminal LFZ88_RS14230 PF02565 Recombination protein O C terminal LFZ88_RS14235 PF01926 50S ribosome-binding GTPase LFZ88_RS14235 PF07650 KH domain LFZ88_RS14240 PF00035 Double-stranded RNA binding motif LFZ88_RS14240 PF14622 Ribonuclease-III-like LFZ88_RS14250 PF10502 Signal peptidase, peptidase S26 LFZ88_RS14255 PF06421 GTP-binding protein LepA C-terminus LFZ88_RS14255 PF00679 Elongation factor G C-terminus LFZ88_RS14255 PF03144 Elongation factor Tu domain 2 LFZ88_RS14255 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS14265 PF03888 MucB/RseB N-terminal domain LFZ88_RS14265 PF17188 MucB/RseB C-terminal domain LFZ88_RS14270 PF03872 Anti sigma-E protein RseA, N-terminal domain LFZ88_RS14270 PF03873 Anti sigma-E protein RseA, C-terminal domain LFZ88_RS14275 PF08281 Sigma-70, region 4 LFZ88_RS14275 PF04542 Sigma-70 region 2 LFZ88_RS14285 PF02910 Fumarate reductase flavoprotein C-term LFZ88_RS14285 PF00890 FAD binding domain LFZ88_RS14290 PF05175 Methyltransferase small domain LFZ88_RS14295 PF00271 Helicase conserved C-terminal domain LFZ88_RS14295 PF00270 DEAD/DEAH box helicase LFZ88_RS14300 PF03466 LysR substrate binding domain LFZ88_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS14305 PF01810 LysE type translocator LFZ88_RS14310 PF01228 Glycine radical LFZ88_RS14315 PF03167 Uracil DNA glycosylase superfamily LFZ88_RS14320 PF00588 SpoU rRNA Methylase family LFZ88_RS14320 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFZ88_RS14325 PF00085 Thioredoxin LFZ88_RS14330 PF03942 DTW domain LFZ88_RS14335 PF00583 Acetyltransferase (GNAT) family LFZ88_RS14335 PF13380 CoA binding domain LFZ88_RS14335 PF13607 Succinyl-CoA ligase like flavodoxin domain LFZ88_RS14340 PF13091 PLD-like domain LFZ88_RS14345 PF10043 Predicted periplasmic lipoprotein (DUF2279) LFZ88_RS14350 PF00083 Sugar (and other) transporter LFZ88_RS14390 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS14390 PF02861 Clp amino terminal domain, pathogenicity island component LFZ88_RS14390 PF17871 AAA lid domain LFZ88_RS14390 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ88_RS14390 PF07724 AAA domain (Cdc48 subfamily) LFZ88_RS14395 PF02578 Multi-copper polyphenol oxidoreductase laccase LFZ88_RS14400 PF01479 S4 domain LFZ88_RS14400 PF00849 RNA pseudouridylate synthase LFZ88_RS14405 PF13525 Outer membrane lipoprotein LFZ88_RS14410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFZ88_RS14415 PF00800 Prephenate dehydratase LFZ88_RS14415 PF01817 Chorismate mutase type II LFZ88_RS14420 PF08450 SMP-30/Gluconolactonase/LRE-like region LFZ88_RS14425 PF02153 Prephenate dehydrogenase LFZ88_RS14425 PF01817 Chorismate mutase type II LFZ88_RS14430 PF00793 DAHP synthetase I family LFZ88_RS14435 PF13689 YfiR/HmsC-like LFZ88_RS14440 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS14440 PF17152 Periplasmic sensor domain LFZ88_RS14445 PF01245 Ribosomal protein L19 LFZ88_RS14450 PF01746 tRNA (Guanine-1)-methyltransferase LFZ88_RS14455 PF05239 PRC-barrel domain LFZ88_RS14455 PF01782 RimM N-terminal domain LFZ88_RS14460 PF00886 Ribosomal protein S16 LFZ88_RS14465 PF02978 Signal peptide binding domain LFZ88_RS14465 PF02881 SRP54-type protein, helical bundle domain LFZ88_RS14465 PF00448 SRP54-type protein, GTPase domain LFZ88_RS14470 PF01578 Cytochrome C assembly protein LFZ88_RS14475 PF00571 CBS domain LFZ88_RS14475 PF01595 Cyclin M transmembrane N-terminal domain LFZ88_RS14475 PF03471 Transporter associated domain LFZ88_RS14485 PF01025 GrpE LFZ88_RS14495 PF01513 ATP-NAD kinase LFZ88_RS14500 PF02463 RecF/RecN/SMC N terminal domain LFZ88_RS14505 PF04355 SmpA / OmlA family LFZ88_RS14510 PF03658 RnfH family Ubiquitin LFZ88_RS14515 PF03364 Polyketide cyclase / dehydrase and lipid transport LFZ88_RS14520 PF01668 SmpB protein LFZ88_RS14535 PF00664 ABC transporter transmembrane region LFZ88_RS14535 PF00005 ABC transporter LFZ88_RS14540 PF00529 HlyD membrane-fusion protein of T1SS LFZ88_RS14540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS14560 PF00717 Peptidase S24-like LFZ88_RS14565 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS14570 PF06183 DinI-like family LFZ88_RS14615 PF06791 Prophage tail length tape measure protein LFZ88_RS14655 PF00574 Clp protease LFZ88_RS14705 PF00182 Chitinase class I LFZ88_RS14725 PF01797 Transposase IS200 like LFZ88_RS14750 PF09669 Phage regulatory protein Rha (Phage_pRha) LFZ88_RS14750 PF03374 Phage antirepressor protein KilAC domain LFZ88_RS14755 PF05866 Endodeoxyribonuclease RusA LFZ88_RS14760 PF05869 DNA N-6-adenine-methyltransferase (Dam) LFZ88_RS14765 PF03354 Phage Terminase LFZ88_RS14800 PF10065 Uncharacterized conserved protein (DUF2303) LFZ88_RS14835 PF12167 Arm DNA-binding domain LFZ88_RS14835 PF00589 Phage integrase family LFZ88_RS14850 PF03614 Repressor of phase-1 flagellin LFZ88_RS14855 PF00669 Bacterial flagellin N-terminal helical region LFZ88_RS14855 PF00700 Bacterial flagellin C-terminal helical region LFZ88_RS14855 PF08884 Flagellin D3 domain LFZ88_RS14860 PF02796 Helix-turn-helix domain of resolvase LFZ88_RS14860 PF00239 Resolvase, N terminal domain LFZ88_RS14870 PF06722 Protein of unknown function (DUF1205) LFZ88_RS14875 PF00664 ABC transporter transmembrane region LFZ88_RS14875 PF00005 ABC transporter LFZ88_RS14885 PF00756 Putative esterase LFZ88_RS14890 PF00593 TonB dependent receptor LFZ88_RS14890 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS14900 PF00805 Pentapeptide repeats (8 copies) LFZ88_RS14910 PF04393 Protein of unknown function (DUF535) LFZ88_RS14925 PF03824 High-affinity nickel-transport protein LFZ88_RS14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS14930 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS14935 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS14935 PF00072 Response regulator receiver domain LFZ88_RS14950 PF01970 Tripartite tricarboxylate transporter TctA family LFZ88_RS14955 PF08943 CsiD LFZ88_RS14960 PF01266 FAD dependent oxidoreductase LFZ88_RS14965 PF00171 Aldehyde dehydrogenase family LFZ88_RS14970 PF00202 Aminotransferase class-III LFZ88_RS14975 PF00324 Amino acid permease LFZ88_RS14980 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS14980 PF07729 FCD domain LFZ88_RS14985 PF01476 LysM domain LFZ88_RS14985 PF04972 BON domain LFZ88_RS14990 PF01679 Proteolipid membrane potential modulator LFZ88_RS14995 PF01022 Bacterial regulatory protein, arsR family LFZ88_RS15000 PF00581 Rhodanese-like domain LFZ88_RS15000 PF11127 Protein of unknown function (DUF2892) LFZ88_RS15010 PF00816 H-NS histone family LFZ88_RS15020 PF06610 L-alanine exporter LFZ88_RS15025 PF09400 Protein of unknown function (DUF2002) LFZ88_RS15030 PF05957 Bacterial protein of unknown function (DUF883) LFZ88_RS15035 PF00155 Aminotransferase class I and II LFZ88_RS15035 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS15040 PF02627 Carboxymuconolactone decarboxylase family LFZ88_RS15050 PF00462 Glutaredoxin LFZ88_RS15055 PF07972 NrdI Flavodoxin like LFZ88_RS15060 PF00317 Ribonucleotide reductase, all-alpha domain LFZ88_RS15060 PF02867 Ribonucleotide reductase, barrel domain LFZ88_RS15060 PF08343 Ribonucleotide reductase N-terminal LFZ88_RS15065 PF00268 Ribonucleotide reductase, small chain LFZ88_RS15070 PF00005 ABC transporter LFZ88_RS15070 PF00571 CBS domain LFZ88_RS15075 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS15080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LFZ88_RS15085 PF07690 Major Facilitator Superfamily LFZ88_RS15090 PF01047 MarR family LFZ88_RS15095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS15095 PF00529 HlyD membrane-fusion protein of T1SS LFZ88_RS15100 PF07690 Major Facilitator Superfamily LFZ88_RS15110 PF02664 S-Ribosylhomocysteinase (LuxS) LFZ88_RS15115 PF04262 Glutamate-cysteine ligase LFZ88_RS15120 PF09335 SNARE associated Golgi protein LFZ88_RS15125 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS15160 PF02599 Global regulator protein family LFZ88_RS15165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFZ88_RS15165 PF02272 DHHA1 domain LFZ88_RS15165 PF01411 tRNA synthetases class II (A) LFZ88_RS15175 PF02631 RecX family LFZ88_RS15180 PF00154 recA bacterial DNA recombination protein LFZ88_RS15185 PF02464 Competence-damaged protein LFZ88_RS15195 PF13406 Transglycosylase SLT domain LFZ88_RS15200 PF03608 PTS system enzyme II sorbitol-specific factor LFZ88_RS15205 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LFZ88_RS15205 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LFZ88_RS15210 PF03829 PTS system glucitol/sorbitol-specific IIA component LFZ88_RS15215 PF00106 short chain dehydrogenase LFZ88_RS15220 PF06923 Glucitol operon activator protein (GutM) LFZ88_RS15225 PF00455 DeoR C terminal sensor domain LFZ88_RS15225 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS15230 PF01380 SIS domain LFZ88_RS15230 PF00571 CBS domain LFZ88_RS15235 PF01590 GAF domain LFZ88_RS15235 PF00158 Sigma-54 interaction domain LFZ88_RS15240 PF00301 Rubredoxin LFZ88_RS15240 PF00258 Flavodoxin LFZ88_RS15240 PF00753 Metallo-beta-lactamase superfamily LFZ88_RS15245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS15245 PF18113 Rubredoxin binding C-terminal domain LFZ88_RS15250 PF01300 Telomere recombination LFZ88_RS15250 PF00708 Acylphosphatase LFZ88_RS15250 PF07503 HypF finger LFZ88_RS15250 PF17788 HypF Kae1-like domain LFZ88_RS15255 PF12800 4Fe-4S binding domain LFZ88_RS15255 PF13247 4Fe-4S dicluster domain LFZ88_RS15265 PF01750 Hydrogenase maturation protease LFZ88_RS15270 PF07450 Formate hydrogenlyase maturation protein HycH LFZ88_RS15275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ88_RS15280 PF12838 4Fe-4S dicluster domain LFZ88_RS15285 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFZ88_RS15285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFZ88_RS15285 PF00374 Nickel-dependent hydrogenase LFZ88_RS15290 PF00146 NADH dehydrogenase LFZ88_RS15295 PF00361 Proton-conducting membrane transporter LFZ88_RS15300 PF13247 4Fe-4S dicluster domain LFZ88_RS15305 PF11046 Transcriptional repressor of hyc and hyp operons LFZ88_RS15315 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ88_RS15320 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ88_RS15325 PF01455 HupF/HypC family LFZ88_RS15330 PF01924 Hydrogenase formation hypA family LFZ88_RS15335 PF00586 AIR synthase related protein, N-terminal domain LFZ88_RS15335 PF02769 AIR synthase related protein, C-terminal domain LFZ88_RS15340 PF00158 Sigma-54 interaction domain LFZ88_RS15340 PF01590 GAF domain LFZ88_RS15340 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS15345 PF11756 Nitrous oxide-stimulated promoter LFZ88_RS15350 PF01297 Zinc-uptake complex component A periplasmic LFZ88_RS15355 PF00005 ABC transporter LFZ88_RS15360 PF00950 ABC 3 transport family LFZ88_RS15365 PF00950 ABC 3 transport family LFZ88_RS15370 PF03421 YopJ Serine/Threonine acetyltransferase LFZ88_RS15385 PF12833 Helix-turn-helix domain LFZ88_RS15400 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) LFZ88_RS15405 PF01514 Secretory protein of YscJ/FliF family LFZ88_RS15415 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LFZ88_RS15420 PF09480 Type III secretion system protein PrgH-EprH (PrgH) LFZ88_RS15425 PF12833 Helix-turn-helix domain LFZ88_RS15430 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS15435 PF01464 Transglycosylase SLT domain LFZ88_RS15440 PF00102 Protein-tyrosine phosphatase LFZ88_RS15440 PF09119 SicP binding LFZ88_RS15440 PF03545 Yersinia virulence determinant (YopE) LFZ88_RS15445 PF05932 Tir chaperone protein (CesT) family LFZ88_RS15455 PF00550 Phosphopantetheine attachment site LFZ88_RS15460 PF09052 SipA N-terminal domain LFZ88_RS15465 PF06511 Type III secretion systems tip complex components LFZ88_RS15470 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) LFZ88_RS15475 PF16535 Type III cell invasion protein SipB LFZ88_RS15475 PF04888 Secretion system effector C (SseC) like family LFZ88_RS15480 PF07720 Tetratricopeptide repeat LFZ88_RS15485 PF01312 FlhB HrpN YscU SpaS Family LFZ88_RS15490 PF01311 Bacterial export proteins, family 1 LFZ88_RS15495 PF01313 Bacterial export proteins, family 3 LFZ88_RS15500 PF00813 FliP family LFZ88_RS15505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFZ88_RS15510 PF02510 Surface presentation of antigens protein LFZ88_RS15515 PF02090 Salmonella surface presentation of antigen gene type M protein LFZ88_RS15520 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ88_RS15520 PF18269 T3SS EscN ATPase C-terminal domain LFZ88_RS15520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS15525 PF03519 Invasion protein B family LFZ88_RS15530 PF00771 FHIPEP family LFZ88_RS15535 PF07201 HrpJ-like domain LFZ88_RS15540 PF03958 Bacterial type II/III secretion system short domain LFZ88_RS15540 PF00263 Bacterial type II and III secretion system protein LFZ88_RS15545 PF12833 Helix-turn-helix domain LFZ88_RS15550 PF04741 InvH outer membrane lipoprotein LFZ88_RS15570 PF00665 Integrase core domain LFZ88_RS15570 PF13276 HTH-like domain LFZ88_RS15570 PF13333 Integrase core domain LFZ88_RS15585 PF13276 HTH-like domain LFZ88_RS15585 PF13333 Integrase core domain LFZ88_RS15585 PF00665 Integrase core domain LFZ88_RS15590 PF01527 Transposase LFZ88_RS15600 PF05190 MutS family domain IV LFZ88_RS15600 PF01624 MutS domain I LFZ88_RS15600 PF05188 MutS domain II LFZ88_RS15600 PF05192 MutS domain III LFZ88_RS15600 PF00488 MutS domain V LFZ88_RS15610 PF07690 Major Facilitator Superfamily LFZ88_RS15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS15615 PF03466 LysR substrate binding domain LFZ88_RS15620 PF02447 GntP family permease LFZ88_RS15625 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS15630 PF01261 Xylose isomerase-like TIM barrel LFZ88_RS15635 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS15640 PF07005 Sugar-binding N-terminal domain LFZ88_RS15640 PF17042 Nucleotide-binding C-terminal domain LFZ88_RS15645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ88_RS15645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ88_RS15650 PF00455 DeoR C terminal sensor domain LFZ88_RS15650 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS15655 PF01047 MarR family LFZ88_RS15660 PF02441 Flavoprotein LFZ88_RS15665 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LFZ88_RS15675 PF04545 Sigma-70, region 4 LFZ88_RS15675 PF04539 Sigma-70 region 3 LFZ88_RS15675 PF00140 Sigma-70 factor, region 1.2 LFZ88_RS15675 PF04542 Sigma-70 region 2 LFZ88_RS15680 PF01476 LysM domain LFZ88_RS15680 PF01551 Peptidase family M23 LFZ88_RS15690 PF01975 Survival protein SurE LFZ88_RS15695 PF01142 tRNA pseudouridine synthase D (TruD) LFZ88_RS15700 PF02542 YgbB family LFZ88_RS15705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFZ88_RS15710 PF04977 Septum formation initiator LFZ88_RS15715 PF12084 Protein of unknown function (DUF3561) LFZ88_RS15725 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS15730 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ88_RS15735 PF04389 Peptidase family M28 LFZ88_RS15740 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LFZ88_RS15745 PF01867 CRISPR associated protein Cas1 LFZ88_RS15755 PF09704 CRISPR-associated protein (Cas_Cas5) LFZ88_RS15760 PF09344 CT1975-like protein LFZ88_RS15770 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) LFZ88_RS15775 PF18019 HD domain LFZ88_RS15775 PF00271 Helicase conserved C-terminal domain LFZ88_RS15775 PF00270 DEAD/DEAH box helicase LFZ88_RS15785 PF11047 Salmonella outer protein D LFZ88_RS15795 PF01507 Phosphoadenosine phosphosulfate reductase family LFZ88_RS15805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ88_RS15805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ88_RS15810 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS15810 PF00258 Flavodoxin LFZ88_RS15810 PF00667 FAD binding domain LFZ88_RS15820 PF01242 6-pyruvoyl tetrahydropterin synthase LFZ88_RS15825 PF03099 Biotin/lipoate A/B protein ligase family LFZ88_RS15825 PF12706 Beta-lactamase superfamily domain LFZ88_RS15830 PF04055 Radical SAM superfamily LFZ88_RS15835 PF03952 Enolase, N-terminal domain LFZ88_RS15835 PF00113 Enolase, C-terminal TIM barrel domain LFZ88_RS15840 PF06418 CTP synthase N-terminus LFZ88_RS15840 PF00117 Glutamine amidotransferase class-I LFZ88_RS15845 PF03819 MazG nucleotide pyrophosphohydrolase domain LFZ88_RS15860 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LFZ88_RS15865 PF13291 ACT domain LFZ88_RS15865 PF04607 Region found in RelA / SpoT proteins LFZ88_RS15865 PF02824 TGS domain LFZ88_RS15870 PF01938 TRAM domain LFZ88_RS15870 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ88_RS15875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFZ88_RS15875 PF00672 HAMP domain LFZ88_RS15875 PF00072 Response regulator receiver domain LFZ88_RS15875 PF01627 Hpt domain LFZ88_RS15875 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS15875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS15880 PF02595 Glycerate kinase family LFZ88_RS15885 PF13378 Enolase C-terminal domain-like LFZ88_RS15890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS15890 PF13378 Enolase C-terminal domain-like LFZ88_RS15895 PF07690 Major Facilitator Superfamily LFZ88_RS15905 PF00258 Flavodoxin LFZ88_RS15910 PF00849 RNA pseudouridylate synthase LFZ88_RS15915 PF04287 tRNA pseudouridine synthase C LFZ88_RS15925 PF07348 Syd protein (SUKH-2) LFZ88_RS15930 PF14489 QueF-like protein LFZ88_RS15930 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LFZ88_RS15935 PF03641 Possible lysine decarboxylase LFZ88_RS15935 PF11892 Domain of unknown function (DUF3412) LFZ88_RS15935 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LFZ88_RS15945 PF03313 Serine dehydratase alpha chain LFZ88_RS15945 PF03315 Serine dehydratase beta chain LFZ88_RS15955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFZ88_RS15955 PF01367 5'-3' exonuclease, C-terminal SAM fold LFZ88_RS15960 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS15965 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS15970 PF07690 Major Facilitator Superfamily LFZ88_RS15975 PF02952 L-fucose isomerase, C-terminal domain LFZ88_RS15975 PF07881 L-fucose isomerase, first N-terminal domain LFZ88_RS15975 PF07882 L-fucose isomerase, second N-terminal domain LFZ88_RS15980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS15980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS15985 PF05025 RbsD / FucU transport protein family LFZ88_RS15990 PF00455 DeoR C terminal sensor domain LFZ88_RS15990 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS15995 PF01728 FtsJ-like methyltransferase LFZ88_RS15995 PF18125 RlmM ferredoxin-like domain LFZ88_RS16000 PF04241 Protein of unknown function (DUF423) LFZ88_RS16005 PF03466 LysR substrate binding domain LFZ88_RS16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS16010 PF06004 Bacterial protein of unknown function (DUF903) LFZ88_RS16015 PF00266 Aminotransferase class-V LFZ88_RS16020 PF02657 Fe-S metabolism associated domain LFZ88_RS16025 PF00892 EamA-like transporter family LFZ88_RS16030 PF00899 ThiF family LFZ88_RS16035 PF03562 MltA specific insert domain LFZ88_RS16035 PF06725 3D domain LFZ88_RS16050 PF11741 AMIN domain LFZ88_RS16050 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ88_RS16055 PF00696 Amino acid kinase family LFZ88_RS16055 PF00583 Acetyltransferase (GNAT) family LFZ88_RS16060 PF13538 UvrD-like helicase C-terminal domain LFZ88_RS16065 PF13361 UvrD-like helicase C-terminal domain LFZ88_RS16065 PF00580 UvrD/REP helicase N-terminal domain LFZ88_RS16065 PF12705 PD-(D/E)XK nuclease superfamily LFZ88_RS16070 PF16187 Middle or third domain of peptidase_M16 LFZ88_RS16070 PF05193 Peptidase M16 inactive domain LFZ88_RS16070 PF00675 Insulinase (Peptidase family M16) LFZ88_RS16075 PF17946 RecC C-terminal domain LFZ88_RS16080 PF12528 Type II secretion prepilin peptidase dependent protein C LFZ88_RS16080 PF07963 Prokaryotic N-terminal methylation motif LFZ88_RS16085 PF10713 Protein of unknown function (DUF2509) LFZ88_RS16090 PF07963 Prokaryotic N-terminal methylation motif LFZ88_RS16095 PF07963 Prokaryotic N-terminal methylation motif LFZ88_RS16105 PF00303 Thymidylate synthase LFZ88_RS16110 PF01790 Prolipoprotein diacylglyceryl transferase LFZ88_RS16115 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ88_RS16115 PF00391 PEP-utilising enzyme, mobile domain LFZ88_RS16115 PF05524 PEP-utilising enzyme, N-terminal LFZ88_RS16115 PF01590 GAF domain LFZ88_RS16120 PF00293 NUDIX domain LFZ88_RS16125 PF02976 DNA mismatch repair enzyme MutH LFZ88_RS16130 PF03741 Integral membrane protein TerC family LFZ88_RS16135 PF06004 Bacterial protein of unknown function (DUF903) LFZ88_RS16140 PF00248 Aldo/keto reductase family LFZ88_RS16145 PF07690 Major Facilitator Superfamily LFZ88_RS16150 PF01553 Acyltransferase LFZ88_RS16150 PF00501 AMP-binding enzyme LFZ88_RS16155 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS16160 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS16165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFZ88_RS16165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ88_RS16170 PF03466 LysR substrate binding domain LFZ88_RS16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS16175 PF01177 Asp/Glu/Hydantoin racemase LFZ88_RS16180 PF00083 Sugar (and other) transporter LFZ88_RS16190 PF04962 KduI/IolB family LFZ88_RS16200 PF02803 Thiolase, C-terminal domain LFZ88_RS16200 PF00108 Thiolase, N-terminal domain LFZ88_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS16205 PF03466 LysR substrate binding domain LFZ88_RS16215 PF03222 Tryptophan/tyrosine permease family LFZ88_RS16220 PF02583 Metal-sensitive transcriptional repressor LFZ88_RS16225 PF03824 High-affinity nickel-transport protein LFZ88_RS16245 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS16245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS16250 PF00577 Outer membrane usher protein LFZ88_RS16250 PF13954 PapC N-terminal domain LFZ88_RS16250 PF13953 PapC C-terminal domain LFZ88_RS16265 PF13505 Outer membrane protein beta-barrel domain LFZ88_RS16280 PF01850 PIN domain LFZ88_RS16305 PF01551 Peptidase family M23 LFZ88_RS16305 PF01476 LysM domain LFZ88_RS16315 PF00293 NUDIX domain LFZ88_RS16320 PF00152 tRNA synthetases class II (D, K and N) LFZ88_RS16320 PF01336 OB-fold nucleic acid binding domain LFZ88_RS16325 PF00472 RF-1 domain LFZ88_RS16325 PF03462 PCRF domain LFZ88_RS16330 PF17768 RecJ OB domain LFZ88_RS16330 PF01368 DHH family LFZ88_RS16330 PF02272 DHHA1 domain LFZ88_RS16335 PF13098 Thioredoxin-like domain LFZ88_RS16335 PF10411 Disulfide bond isomerase protein N-terminus LFZ88_RS16340 PF02899 Phage integrase, N-terminal SAM-like domain LFZ88_RS16340 PF00589 Phage integrase family LFZ88_RS16345 PF00258 Flavodoxin LFZ88_RS16350 PF07254 Membrane-bound toxin component of toxin-antitoxin system LFZ88_RS16355 PF03937 Flavinator of succinate dehydrogenase LFZ88_RS16365 PF01571 Aminomethyltransferase folate-binding domain LFZ88_RS16375 PF03006 Haemolysin-III related LFZ88_RS16380 PF04266 ASCH domain LFZ88_RS16385 PF00232 Glycosyl hydrolase family 1 LFZ88_RS16405 PF02347 Glycine cleavage system P-protein LFZ88_RS16410 PF01597 Glycine cleavage H-protein LFZ88_RS16415 PF01571 Aminomethyltransferase folate-binding domain LFZ88_RS16415 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFZ88_RS16420 PF01494 FAD binding domain LFZ88_RS16425 PF01494 FAD binding domain LFZ88_RS16430 PF05195 Aminopeptidase P, N-terminal domain LFZ88_RS16430 PF00557 Metallopeptidase family M24 LFZ88_RS16435 PF03695 Uncharacterised protein family (UPF0149) LFZ88_RS16445 PF05164 Cell division protein ZapA LFZ88_RS16455 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFZ88_RS16460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ88_RS16460 PF01842 ACT domain LFZ88_RS16460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ88_RS16465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LFZ88_RS16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS16470 PF03466 LysR substrate binding domain LFZ88_RS16480 PF04402 Protein of unknown function (DUF541) LFZ88_RS16485 PF01810 LysE type translocator LFZ88_RS16490 PF00924 Mechanosensitive ion channel LFZ88_RS16490 PF05552 Conserved TM helix LFZ88_RS16495 PF01116 Fructose-bisphosphate aldolase class-II LFZ88_RS16500 PF00162 Phosphoglycerate kinase LFZ88_RS16505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFZ88_RS16505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFZ88_RS16530 PF00005 ABC transporter LFZ88_RS16535 PF00005 ABC transporter LFZ88_RS16540 PF02779 Transketolase, pyrimidine binding domain LFZ88_RS16540 PF02780 Transketolase, C-terminal domain LFZ88_RS16540 PF00456 Transketolase, thiamine diphosphate binding domain LFZ88_RS16545 PF01435 Peptidase family M48 LFZ88_RS16550 PF00491 Arginase family LFZ88_RS16555 PF12697 Alpha/beta hydrolase family LFZ88_RS16560 PF04074 YhcH/YjgK/YiaL LFZ88_RS16565 PF02615 Malate/L-lactate dehydrogenase LFZ88_RS16570 PF00107 Zinc-binding dehydrogenase LFZ88_RS16570 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS16575 PF01232 Mannitol dehydrogenase Rossmann domain LFZ88_RS16575 PF08125 Mannitol dehydrogenase C-terminal domain LFZ88_RS16580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS16580 PF13378 Enolase C-terminal domain-like LFZ88_RS16585 PF13378 Enolase C-terminal domain-like LFZ88_RS16585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS16590 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS16590 PF07729 FCD domain LFZ88_RS16600 PF17944 Arginine decarboxylase C-terminal helical extension LFZ88_RS16600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFZ88_RS16600 PF17810 Arginine decarboxylase helical bundle domain LFZ88_RS16615 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFZ88_RS16615 PF02772 S-adenosylmethionine synthetase, central domain LFZ88_RS16615 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFZ88_RS16620 PF00083 Sugar (and other) transporter LFZ88_RS16625 PF17283 SprT-like zinc ribbon domain LFZ88_RS16625 PF10263 SprT-like family LFZ88_RS16630 PF04231 Endonuclease I LFZ88_RS16635 PF04452 RNA methyltransferase LFZ88_RS16640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LFZ88_RS16640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LFZ88_RS16645 PF02622 Uncharacterized ACR, COG1678 LFZ88_RS16650 PF03652 Holliday junction resolvase LFZ88_RS16660 PF00437 Type II/IV secretion system protein LFZ88_RS16665 PF01168 Alanine racemase, N-terminal domain LFZ88_RS16670 PF02325 YGGT family LFZ88_RS16675 PF02594 Uncharacterised ACR, YggU family COG1872 LFZ88_RS16680 PF01725 Ham1 family LFZ88_RS16685 PF06969 HemN C-terminal domain LFZ88_RS16685 PF04055 Radical SAM superfamily LFZ88_RS16690 PF06717 Protein of unknown function (DUF1202) LFZ88_RS16695 PF00710 Asparaginase, N-terminal LFZ88_RS16695 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ88_RS16700 PF11101 Protein of unknown function (DUF2884) LFZ88_RS16705 PF04320 Protein with unknown function (DUF469) LFZ88_RS16710 PF02390 Putative methyltransferase LFZ88_RS16720 PF00633 Helix-hairpin-helix motif LFZ88_RS16720 PF00730 HhH-GPD superfamily base excision DNA repair protein LFZ88_RS16720 PF14815 NUDIX domain LFZ88_RS16725 PF04362 Bacterial Fe(2+) trafficking LFZ88_RS16730 PF01464 Transglycosylase SLT domain LFZ88_RS16730 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LFZ88_RS16735 PF03825 Nucleoside H+ symporter LFZ88_RS16740 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ88_RS16740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ88_RS16740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ88_RS16750 PF04474 Protein of unknown function (DUF554) LFZ88_RS16760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFZ88_RS16765 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LFZ88_RS16765 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LFZ88_RS16770 PF01575 MaoC like domain LFZ88_RS16775 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS16780 PF03466 LysR substrate binding domain LFZ88_RS16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS16785 PF00884 Sulfatase LFZ88_RS16790 PF04055 Radical SAM superfamily LFZ88_RS16795 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS16805 PF13520 Amino acid permease LFZ88_RS16815 PF01266 FAD dependent oxidoreductase LFZ88_RS16820 PF00171 Aldehyde dehydrogenase family LFZ88_RS16825 PF04965 Gene 25-like lysozyme LFZ88_RS16835 PF01522 Polysaccharide deacetylase LFZ88_RS16845 PF07690 Major Facilitator Superfamily LFZ88_RS16850 PF03786 D-mannonate dehydratase (UxuA) LFZ88_RS16855 PF08125 Mannitol dehydrogenase C-terminal domain LFZ88_RS16855 PF01232 Mannitol dehydrogenase Rossmann domain LFZ88_RS16860 PF02614 Glucuronate isomerase LFZ88_RS16870 PF05257 CHAP domain LFZ88_RS16870 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ88_RS16875 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS16885 PF01497 Periplasmic binding protein LFZ88_RS16890 PF01455 HupF/HypC family LFZ88_RS16895 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFZ88_RS16900 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LFZ88_RS16905 PF01750 Hydrogenase maturation protease LFZ88_RS16910 PF00374 Nickel-dependent hydrogenase LFZ88_RS16915 PF03916 Polysulphide reductase, NrfD LFZ88_RS16920 PF13247 4Fe-4S dicluster domain LFZ88_RS16925 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFZ88_RS16925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFZ88_RS16935 PF11115 Protein of unknown function (DUF2623) LFZ88_RS16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS16940 PF00672 HAMP domain LFZ88_RS16940 PF02203 Tar ligand binding domain homologue LFZ88_RS16945 PF03350 Uncharacterized protein family, UPF0114 LFZ88_RS16970 PF02472 Biopolymer transport protein ExbD/TolR LFZ88_RS16975 PF01618 MotA/TolQ/ExbB proton channel family LFZ88_RS16980 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ88_RS16985 PF09335 SNARE associated Golgi protein LFZ88_RS16990 PF06719 AraC-type transcriptional regulator N-terminus LFZ88_RS16990 PF12833 Helix-turn-helix domain LFZ88_RS16995 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS17000 PF00248 Aldo/keto reductase family LFZ88_RS17005 PF00939 Sodium:sulfate symporter transmembrane region LFZ88_RS17020 PF04055 Radical SAM superfamily LFZ88_RS17020 PF08497 Radical SAM N-terminal LFZ88_RS17020 PF11842 Domain of unknown function (DUF3362) LFZ88_RS17025 PF03480 Bacterial extracellular solute-binding protein, family 7 LFZ88_RS17035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LFZ88_RS17040 PF07732 Multicopper oxidase LFZ88_RS17040 PF07731 Multicopper oxidase LFZ88_RS17040 PF00394 Multicopper oxidase LFZ88_RS17045 PF01553 Acyltransferase LFZ88_RS17050 PF03989 DNA gyrase C-terminal domain, beta-propeller LFZ88_RS17050 PF00521 DNA gyrase/topoisomerase IV, subunit A LFZ88_RS17055 PF06445 GyrI-like small molecule binding domain LFZ88_RS17060 PF04076 Bacterial OB fold (BOF) protein LFZ88_RS17065 PF00072 Response regulator receiver domain LFZ88_RS17065 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS17070 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS17070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS17070 PF08521 Two-component sensor kinase N-terminal LFZ88_RS17075 PF02525 Flavodoxin-like fold LFZ88_RS17080 PF03992 Antibiotic biosynthesis monooxygenase LFZ88_RS17085 PF00204 DNA gyrase B LFZ88_RS17085 PF00986 DNA gyrase B subunit, carboxyl terminus LFZ88_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS17085 PF01751 Toprim domain LFZ88_RS17090 PF05728 Uncharacterised protein family (UPF0227) LFZ88_RS17095 PF00149 Calcineurin-like phosphoesterase LFZ88_RS17100 PF06853 Protein of unknown function (DUF1249) LFZ88_RS17105 PF00293 NUDIX domain LFZ88_RS17110 PF02321 Outer membrane efflux protein LFZ88_RS17120 PF06693 Protein of unknown function (DUF1190) LFZ88_RS17125 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ88_RS17130 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LFZ88_RS17135 PF02535 ZIP Zinc transporter LFZ88_RS17145 PF05935 Arylsulfotransferase (ASST) LFZ88_RS17145 PF17425 Arylsulfotransferase Ig-like domain LFZ88_RS17150 PF01323 DSBA-like thioredoxin domain LFZ88_RS17155 PF02600 Disulfide bond formation protein DsbB LFZ88_RS17160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFZ88_RS17165 PF04380 Membrane fusogenic activity LFZ88_RS17170 PF08971 Glycogen synthesis protein LFZ88_RS17175 PF07290 Protein of unknown function (DUF1449) LFZ88_RS17180 PF15975 Flotillin LFZ88_RS17180 PF01145 SPFH domain / Band 7 family LFZ88_RS17190 PF00294 pfkB family carbohydrate kinase LFZ88_RS17190 PF01467 Cytidylyltransferase-like LFZ88_RS17195 PF03710 Glutamate-ammonia ligase adenylyltransferase LFZ88_RS17195 PF08335 GlnD PII-uridylyltransferase LFZ88_RS17200 PF01928 CYTH domain LFZ88_RS17205 PF08239 Bacterial SH3 domain LFZ88_RS17210 PF01966 HD domain LFZ88_RS17210 PF01743 Poly A polymerase head domain LFZ88_RS17210 PF12627 Probable RNA and SrmB- binding site of polymerase A LFZ88_RS17215 PF02673 Bacitracin resistance protein BacA LFZ88_RS17220 PF02152 Dihydroneopterin aldolase LFZ88_RS17225 PF02660 Glycerol-3-phosphate acyltransferase LFZ88_RS17235 PF00814 Glycoprotease family LFZ88_RS17245 PF01165 Ribosomal protein S21 LFZ88_RS17250 PF10410 DnaB-helicase binding domain of primase LFZ88_RS17250 PF08278 DNA primase DnaG DnaB-binding LFZ88_RS17250 PF08275 DNA primase catalytic core, N-terminal domain LFZ88_RS17250 PF01807 CHC2 zinc finger LFZ88_RS17255 PF04545 Sigma-70, region 4 LFZ88_RS17255 PF04539 Sigma-70 region 3 LFZ88_RS17255 PF04542 Sigma-70 region 2 LFZ88_RS17255 PF00140 Sigma-70 factor, region 1.2 LFZ88_RS17255 PF03979 Sigma-70 factor, region 1.1 LFZ88_RS17255 PF04546 Sigma-70, non-essential region LFZ88_RS17260 PF03167 Uracil DNA glycosylase superfamily LFZ88_RS17270 PF08021 Siderophore-interacting FAD-binding domain LFZ88_RS17270 PF04954 Siderophore-interacting protein LFZ88_RS17275 PF03551 Transcriptional regulator PadR-like family LFZ88_RS17280 PF02203 Tar ligand binding domain homologue LFZ88_RS17280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS17280 PF00672 HAMP domain LFZ88_RS17285 PF08447 PAS fold LFZ88_RS17285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS17295 PF00202 Aminotransferase class-III LFZ88_RS17300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS17300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFZ88_RS17305 PF05175 Methyltransferase small domain LFZ88_RS17310 PF01863 Protein of unknown function DUF45 LFZ88_RS17315 PF02698 DUF218 domain LFZ88_RS17320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ88_RS17325 PF03741 Integral membrane protein TerC family LFZ88_RS17330 PF00375 Sodium:dicarboxylate symporter family LFZ88_RS17335 PF09335 SNARE associated Golgi protein LFZ88_RS17340 PF13721 SecD export protein N-terminal TM region LFZ88_RS17345 PF06476 Protein of unknown function (DUF1090) LFZ88_RS17350 PF05957 Bacterial protein of unknown function (DUF883) LFZ88_RS17355 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LFZ88_RS17360 PF13997 YqjK-like protein LFZ88_RS17365 PF07681 DoxX LFZ88_RS17370 PF13409 Glutathione S-transferase, N-terminal domain LFZ88_RS17375 PF05656 Protein of unknown function (DUF805) LFZ88_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS17380 PF03466 LysR substrate binding domain LFZ88_RS17385 PF02678 Pirin LFZ88_RS17385 PF17954 Quercetinase C-terminal cupin domain LFZ88_RS17395 PF03313 Serine dehydratase alpha chain LFZ88_RS17405 PF03315 Serine dehydratase beta chain LFZ88_RS17405 PF03313 Serine dehydratase alpha chain LFZ88_RS17410 PF01228 Glycine radical LFZ88_RS17410 PF02901 Pyruvate formate lyase-like LFZ88_RS17415 PF00871 Acetokinase family LFZ88_RS17420 PF03222 Tryptophan/tyrosine permease family LFZ88_RS17425 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS17430 PF03466 LysR substrate binding domain LFZ88_RS17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS17455 PF02595 Glycerate kinase family LFZ88_RS17460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ88_RS17460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ88_RS17465 PF03328 HpcH/HpaI aldolase/citrate lyase family LFZ88_RS17470 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LFZ88_RS17470 PF08666 SAF domain LFZ88_RS17475 PF00294 pfkB family carbohydrate kinase LFZ88_RS17480 PF00455 DeoR C terminal sensor domain LFZ88_RS17480 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS17485 PF01116 Fructose-bisphosphate aldolase class-II LFZ88_RS17490 PF00294 pfkB family carbohydrate kinase LFZ88_RS17495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS17495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS17500 PF00381 PTS HPr component phosphorylation site LFZ88_RS17500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS17505 PF08013 Tagatose 6 phosphate kinase LFZ88_RS17510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS17515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS17520 PF03611 PTS system sugar-specific permease component LFZ88_RS17525 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS17525 PF00107 Zinc-binding dehydrogenase LFZ88_RS17530 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS17535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS17540 PF04348 LppC putative lipoprotein LFZ88_RS17545 PF02021 Uncharacterised protein family UPF0102 LFZ88_RS17550 PF13580 SIS domain LFZ88_RS17555 PF04972 BON domain LFZ88_RS17560 PF13460 NAD(P)H-binding LFZ88_RS17565 PF01965 DJ-1/PfpI family LFZ88_RS17575 PF01541 GIY-YIG catalytic domain LFZ88_RS17580 PF13508 Acetyltransferase (GNAT) domain LFZ88_RS17585 PF02036 SCP-2 sterol transfer family LFZ88_RS17590 PF01136 Peptidase family U32 LFZ88_RS17595 PF01136 Peptidase family U32 LFZ88_RS17600 PF00296 Luciferase-like monooxygenase LFZ88_RS17605 PF03222 Tryptophan/tyrosine permease family LFZ88_RS17610 PF03880 DbpA RNA binding domain LFZ88_RS17610 PF00270 DEAD/DEAH box helicase LFZ88_RS17610 PF12343 Cold shock protein DEAD box A LFZ88_RS17610 PF00271 Helicase conserved C-terminal domain LFZ88_RS17615 PF07719 Tetratricopeptide repeat LFZ88_RS17615 PF13181 Tetratricopeptide repeat LFZ88_RS17620 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFZ88_RS17620 PF00013 KH domain LFZ88_RS17620 PF00575 S1 RNA binding domain LFZ88_RS17620 PF01138 3' exoribonuclease family, domain 1 LFZ88_RS17620 PF03725 3' exoribonuclease family, domain 2 LFZ88_RS17625 PF00312 Ribosomal protein S15 LFZ88_RS17630 PF09157 Pseudouridine synthase II TruB, C-terminal LFZ88_RS17630 PF16198 tRNA pseudouridylate synthase B C-terminal domain LFZ88_RS17630 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFZ88_RS17635 PF02033 Ribosome-binding factor A LFZ88_RS17640 PF04760 Translation initiation factor IF-2, N-terminal region LFZ88_RS17640 PF11987 Translation-initiation factor 2 LFZ88_RS17640 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS17640 PF08364 Bacterial translation initiation factor IF-2 associated region LFZ88_RS17645 PF08529 NusA N-terminal domain LFZ88_RS17645 PF13184 NusA-like KH domain LFZ88_RS17650 PF17384 RimP C-terminal SH3 domain LFZ88_RS17650 PF02576 RimP N-terminal domain LFZ88_RS17660 PF00764 Arginosuccinate synthase LFZ88_RS17675 PF03840 Preprotein translocase SecG subunit LFZ88_RS17680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFZ88_RS17680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFZ88_RS17680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFZ88_RS17680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFZ88_RS17685 PF00809 Pterin binding enzyme LFZ88_RS17690 PF01434 Peptidase family M41 LFZ88_RS17690 PF06480 FtsH Extracellular LFZ88_RS17690 PF17862 AAA+ lid domain LFZ88_RS17690 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS17700 PF01728 FtsJ-like methyltransferase LFZ88_RS17705 PF01985 CRS1 / YhbY (CRM) domain LFZ88_RS17710 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ88_RS17710 PF03449 Transcription elongation factor, N-terminal LFZ88_RS17715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LFZ88_RS17720 PF01926 50S ribosome-binding GTPase LFZ88_RS17720 PF01018 GTP1/OBG LFZ88_RS17725 PF00892 EamA-like transporter family LFZ88_RS17730 PF01016 Ribosomal L27 protein LFZ88_RS17735 PF00829 Ribosomal prokaryotic L21 protein LFZ88_RS17740 PF00348 Polyprenyl synthetase LFZ88_RS17745 PF13693 Winged helix-turn-helix DNA-binding LFZ88_RS17750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFZ88_RS17755 PF01722 BolA-like protein LFZ88_RS17760 PF13466 STAS domain LFZ88_RS17765 PF05494 MlaC protein LFZ88_RS17770 PF02470 MlaD protein LFZ88_RS17775 PF02405 Permease MlaE LFZ88_RS17780 PF00005 ABC transporter LFZ88_RS17785 PF01699 Sodium/calcium exchanger protein LFZ88_RS17790 PF01380 SIS domain LFZ88_RS17790 PF00571 CBS domain LFZ88_RS17800 PF06835 Lipopolysaccharide-assembly, LptC-related LFZ88_RS17805 PF03968 OstA-like protein LFZ88_RS17810 PF00005 ABC transporter LFZ88_RS17810 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFZ88_RS17815 PF04552 Sigma-54, DNA binding domain LFZ88_RS17815 PF04963 Sigma-54 factor, core binding domain LFZ88_RS17815 PF00309 Sigma-54 factor, Activator interacting domain (AID) LFZ88_RS17820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFZ88_RS17825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS17830 PF03668 P-loop ATPase protein family LFZ88_RS17835 PF00381 PTS HPr component phosphorylation site LFZ88_RS17845 PF10707 PhoP regulatory network protein YrbL LFZ88_RS17850 PF00912 Transglycosylase LFZ88_RS17860 PF00072 Response regulator receiver domain LFZ88_RS17860 PF01627 Hpt domain LFZ88_RS17860 PF00989 PAS fold LFZ88_RS17860 PF18415 Histidine kinase receptor ArcB trans-membrane domain LFZ88_RS17860 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS17865 PF16199 Radical_SAM C-terminal domain LFZ88_RS17865 PF04055 Radical SAM superfamily LFZ88_RS17880 PF00310 Glutamine amidotransferases class-II LFZ88_RS17880 PF01645 Conserved region in glutamate synthase LFZ88_RS17880 PF01493 GXGXG motif LFZ88_RS17880 PF04898 Glutamate synthase central domain LFZ88_RS17885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS17885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFZ88_RS17890 PF06250 YhcG PDDEXK nuclease domain LFZ88_RS17890 PF17761 DUF1016 N-terminal domain LFZ88_RS17895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LFZ88_RS17900 PF07969 Amidohydrolase family LFZ88_RS17905 PF04074 YhcH/YjgK/YiaL LFZ88_RS17910 PF00480 ROK family LFZ88_RS17915 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LFZ88_RS17920 PF07690 Major Facilitator Superfamily LFZ88_RS17925 PF00701 Dihydrodipicolinate synthetase family LFZ88_RS17930 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS17930 PF07729 FCD domain LFZ88_RS17935 PF04386 Stringent starvation protein B LFZ88_RS17940 PF00043 Glutathione S-transferase, C-terminal domain LFZ88_RS17940 PF02798 Glutathione S-transferase, N-terminal domain LFZ88_RS17950 PF00380 Ribosomal protein S9/S16 LFZ88_RS17955 PF00572 Ribosomal protein L13 LFZ88_RS17960 PF03969 AFG1-like ATPase LFZ88_RS17965 PF06295 Protein of unknown function (DUF1043) LFZ88_RS17970 PF00595 PDZ domain LFZ88_RS17970 PF13180 PDZ domain LFZ88_RS17975 PF13180 PDZ domain LFZ88_RS17980 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LFZ88_RS17985 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LFZ88_RS17990 PF02436 Conserved carboxylase domain LFZ88_RS17990 PF00682 HMGL-like LFZ88_RS17990 PF00364 Biotin-requiring enzyme LFZ88_RS17995 PF04277 Oxaloacetate decarboxylase, gamma chain LFZ88_RS18000 PF05683 Fumarase C-terminus LFZ88_RS18005 PF05681 Fumarate hydratase (Fumerase) LFZ88_RS18010 PF00939 Sodium:sulfate symporter transmembrane region LFZ88_RS18020 PF07702 UTRA domain LFZ88_RS18020 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS18025 PF00056 lactate/malate dehydrogenase, NAD binding domain LFZ88_RS18025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LFZ88_RS18030 PF01316 Arginine repressor, DNA binding domain LFZ88_RS18030 PF02863 Arginine repressor, C-terminal domain LFZ88_RS18035 PF07338 Protein of unknown function (DUF1471) LFZ88_RS18040 PF07338 Protein of unknown function (DUF1471) LFZ88_RS18045 PF01337 Barstar (barnase inhibitor) LFZ88_RS18050 PF04632 Fusaric acid resistance protein family LFZ88_RS18055 PF13533 Biotin-lipoyl like LFZ88_RS18060 PF07869 Protein of unknown function (DUF1656) LFZ88_RS18065 PF03466 LysR substrate binding domain LFZ88_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS18070 PF01523 Putative modulator of DNA gyrase LFZ88_RS18075 PF13502 AsmA-like C-terminal region LFZ88_RS18075 PF13116 Protein of unknown function LFZ88_RS18080 PF10150 Ribonuclease E/G family LFZ88_RS18080 PF00575 S1 RNA binding domain LFZ88_RS18085 PF02545 Maf-like protein LFZ88_RS18090 PF04093 rod shape-determining protein MreD LFZ88_RS18095 PF04085 rod shape-determining protein MreC LFZ88_RS18115 PF17157 Gammaproteobacterial periplasmic sensor domain LFZ88_RS18115 PF00563 EAL domain LFZ88_RS18115 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS18120 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS18120 PF00107 Zinc-binding dehydrogenase LFZ88_RS18125 PF00174 Oxidoreductase molybdopterin binding domain LFZ88_RS18130 PF01794 Ferric reductase like transmembrane component LFZ88_RS18135 PF00364 Biotin-requiring enzyme LFZ88_RS18140 PF02785 Biotin carboxylase C-terminal domain LFZ88_RS18140 PF00289 Biotin carboxylase, N-terminal domain LFZ88_RS18140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFZ88_RS18145 PF06196 Protein of unknown function (DUF997) LFZ88_RS18150 PF00474 Sodium:solute symporter family LFZ88_RS18160 PF01207 Dihydrouridine synthase (Dus) LFZ88_RS18165 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS18170 PF01555 DNA methylase LFZ88_RS18175 PF10831 Protein of unknown function (DUF2556) LFZ88_RS18180 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS18180 PF00563 EAL domain LFZ88_RS18180 PF03707 Bacterial signalling protein N terminal repeat LFZ88_RS18185 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS18185 PF08361 MAATS-type transcriptional repressor, C-terminal region LFZ88_RS18190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFZ88_RS18190 PF00529 HlyD membrane-fusion protein of T1SS LFZ88_RS18195 PF00873 AcrB/AcrD/AcrF family LFZ88_RS18245 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS18250 PF07369 Protein of unknown function (DUF1488) LFZ88_RS18255 PF08501 Shikimate dehydrogenase substrate binding domain LFZ88_RS18255 PF01488 Shikimate / quinate 5-dehydrogenase LFZ88_RS18255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LFZ88_RS18260 PF01300 Telomere recombination LFZ88_RS18265 PF01396 Topoisomerase DNA binding C4 zinc finger LFZ88_RS18270 PF04361 Protein of unknown function (DUF494) LFZ88_RS18275 PF02481 DNA recombination-mediator protein A LFZ88_RS18275 PF17782 DprA winged helix domain LFZ88_RS18280 PF01327 Polypeptide deformylase LFZ88_RS18285 PF00551 Formyl transferase LFZ88_RS18285 PF02911 Formyl transferase, C-terminal domain LFZ88_RS18290 PF01029 NusB family LFZ88_RS18290 PF01189 16S rRNA methyltransferase RsmB/F LFZ88_RS18295 PF02254 TrkA-N domain LFZ88_RS18295 PF02080 TrkA-C domain LFZ88_RS18300 PF01741 Large-conductance mechanosensitive channel, MscL LFZ88_RS18305 PF03889 Alternative ribosome-rescue factor A LFZ88_RS18310 PF13411 MerR HTH family regulatory protein LFZ88_RS18315 PF09350 Domain of unknown function (DUF1992) LFZ88_RS18320 PF01196 Ribosomal protein L17 LFZ88_RS18325 PF01000 RNA polymerase Rpb3/RpoA insert domain LFZ88_RS18325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFZ88_RS18325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFZ88_RS18330 PF01479 S4 domain LFZ88_RS18330 PF00163 Ribosomal protein S4/S9 N-terminal domain LFZ88_RS18335 PF00411 Ribosomal protein S11 LFZ88_RS18340 PF00416 Ribosomal protein S13/S18 LFZ88_RS18345 PF00444 Ribosomal protein L36 LFZ88_RS18350 PF00344 SecY translocase LFZ88_RS18355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LFZ88_RS18360 PF00327 Ribosomal protein L30p/L7e LFZ88_RS18365 PF03719 Ribosomal protein S5, C-terminal domain LFZ88_RS18365 PF00333 Ribosomal protein S5, N-terminal domain LFZ88_RS18370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LFZ88_RS18375 PF00347 Ribosomal protein L6 LFZ88_RS18380 PF00410 Ribosomal protein S8 LFZ88_RS18385 PF00253 Ribosomal protein S14p/S29e LFZ88_RS18390 PF00281 Ribosomal protein L5 LFZ88_RS18390 PF00673 ribosomal L5P family C-terminus LFZ88_RS18395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LFZ88_RS18395 PF00467 KOW motif LFZ88_RS18400 PF00238 Ribosomal protein L14p/L23e LFZ88_RS18405 PF00366 Ribosomal protein S17 LFZ88_RS18410 PF00831 Ribosomal L29 protein LFZ88_RS18415 PF00252 Ribosomal protein L16p/L10e LFZ88_RS18420 PF00189 Ribosomal protein S3, C-terminal domain LFZ88_RS18420 PF07650 KH domain LFZ88_RS18425 PF00237 Ribosomal protein L22p/L17e LFZ88_RS18430 PF00203 Ribosomal protein S19 LFZ88_RS18435 PF03947 Ribosomal Proteins L2, C-terminal domain LFZ88_RS18435 PF00181 Ribosomal Proteins L2, RNA binding domain LFZ88_RS18440 PF00276 Ribosomal protein L23 LFZ88_RS18445 PF00573 Ribosomal protein L4/L1 family LFZ88_RS18450 PF00297 Ribosomal protein L3 LFZ88_RS18455 PF00338 Ribosomal protein S10p/S20e LFZ88_RS18465 PF01478 Type IV leader peptidase family LFZ88_RS18470 PF00210 Ferritin-like domain LFZ88_RS18475 PF04324 BFD-like [2Fe-2S] binding domain LFZ88_RS18490 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS18490 PF03143 Elongation factor Tu C-terminal domain LFZ88_RS18490 PF03144 Elongation factor Tu domain 2 LFZ88_RS18495 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS18495 PF03764 Elongation factor G, domain IV LFZ88_RS18495 PF14492 Elongation Factor G, domain II LFZ88_RS18495 PF03144 Elongation factor Tu domain 2 LFZ88_RS18495 PF00679 Elongation factor G C-terminus LFZ88_RS18500 PF00177 Ribosomal protein S7p/S5e LFZ88_RS18505 PF00164 Ribosomal protein S12/S23 LFZ88_RS18510 PF04077 DsrH like protein LFZ88_RS18515 PF02635 DsrE/DsrF-like family LFZ88_RS18520 PF02635 DsrE/DsrF-like family LFZ88_RS18525 PF08348 YheO-like PAS domain LFZ88_RS18525 PF13309 HTH domain LFZ88_RS18530 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LFZ88_RS18530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ88_RS18535 PF04102 SlyX LFZ88_RS18540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ88_RS18545 PF09526 Probable metal-binding protein (DUF2387) LFZ88_RS18550 PF00999 Sodium/hydrogen exchanger family LFZ88_RS18550 PF02254 TrkA-N domain LFZ88_RS18555 PF02525 Flavodoxin-like fold LFZ88_RS18560 PF00005 ABC transporter LFZ88_RS18560 PF12848 ABC transporter LFZ88_RS18565 PF03466 LysR substrate binding domain LFZ88_RS18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS18570 PF08803 Putative mono-oxygenase ydhR LFZ88_RS18575 PF00561 alpha/beta hydrolase fold LFZ88_RS18580 PF06794 Uncharacterised protein family (UPF0270) LFZ88_RS18585 PF00485 Phosphoribulokinase / Uridine kinase family LFZ88_RS18590 PF02566 OsmC-like protein LFZ88_RS18595 PF00027 Cyclic nucleotide-binding domain LFZ88_RS18595 PF13545 Crp-like helix-turn-helix domain LFZ88_RS18600 PF12805 FUSC-like inner membrane protein yccS LFZ88_RS18605 PF00202 Aminotransferase class-III LFZ88_RS18610 PF00117 Glutamine amidotransferase class-I LFZ88_RS18615 PF02661 Fic/DOC family LFZ88_RS18620 PF10832 Protein of unknown function (DUF2559) LFZ88_RS18625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFZ88_RS18630 PF07690 Major Facilitator Superfamily LFZ88_RS18635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFZ88_RS18635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFZ88_RS18635 PF18267 Rubredoxin NAD+ reductase C-terminal domain LFZ88_RS18635 PF04324 BFD-like [2Fe-2S] binding domain LFZ88_RS18635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS18640 PF13806 Rieske-like [2Fe-2S] domain LFZ88_RS18645 PF01226 Formate/nitrite transporter LFZ88_RS18650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFZ88_RS18650 PF14824 Sirohaem biosynthesis protein central LFZ88_RS18650 PF10414 Sirohaem synthase dimerisation region LFZ88_RS18660 PF13978 Protein of unknown function (DUF4223) LFZ88_RS18665 PF00579 tRNA synthetases class I (W and Y) LFZ88_RS18670 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS18675 PF00834 Ribulose-phosphate 3 epimerase family LFZ88_RS18680 PF02086 D12 class N6 adenine-specific DNA methyltransferase LFZ88_RS18685 PF05036 Sporulation related domain LFZ88_RS18690 PF01761 3-dehydroquinate synthase LFZ88_RS18695 PF01202 Shikimate kinase LFZ88_RS18710 PF10748 DNA utilization proteins HofP LFZ88_RS18720 PF05137 Fimbrial assembly protein (PilN) LFZ88_RS18730 PF00912 Transglycosylase LFZ88_RS18730 PF17092 Penicillin-binding protein OB-like domain LFZ88_RS18730 PF00905 Penicillin binding protein transpeptidase domain LFZ88_RS18735 PF00293 NUDIX domain LFZ88_RS18740 PF07095 Intracellular growth attenuator protein IgaA LFZ88_RS18745 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS18750 PF01479 S4 domain LFZ88_RS18755 PF01430 Hsp33 protein LFZ88_RS18760 PF13687 Domain of unknown function (DUF4153) LFZ88_RS18765 PF01293 Phosphoenolpyruvate carboxykinase LFZ88_RS18770 PF00672 HAMP domain LFZ88_RS18770 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS18775 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS18775 PF00072 Response regulator receiver domain LFZ88_RS18780 PF03449 Transcription elongation factor, N-terminal LFZ88_RS18780 PF01272 Transcription elongation factor, GreA/GreB, C-term LFZ88_RS18785 PF16921 Tex protein YqgF-like domain LFZ88_RS18785 PF17674 HHH domain LFZ88_RS18785 PF00575 S1 RNA binding domain LFZ88_RS18785 PF09371 Tex-like protein N-terminal domain LFZ88_RS18795 PF04023 FeoA domain LFZ88_RS18800 PF07664 Ferrous iron transport protein B C terminus LFZ88_RS18800 PF17910 FeoB cytosolic helical domain LFZ88_RS18800 PF07670 Nucleoside recognition LFZ88_RS18800 PF02421 Ferrous iron transport protein B LFZ88_RS18805 PF09012 FeoC like transcriptional regulator LFZ88_RS18810 PF04754 Putative transposase, YhgA-like LFZ88_RS18815 PF00561 alpha/beta hydrolase fold LFZ88_RS18820 PF00156 Phosphoribosyl transferase domain LFZ88_RS18825 PF01521 Iron-sulphur cluster biosynthesis LFZ88_RS18825 PF01106 NifU-like domain LFZ88_RS18830 PF02447 GntP family permease LFZ88_RS18835 PF02446 4-alpha-glucanotransferase LFZ88_RS18840 PF00343 Carbohydrate phosphorylase LFZ88_RS18845 PF17874 MalT-like TPR region LFZ88_RS18845 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS18855 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LFZ88_RS18855 PF01137 RNA 3'-terminal phosphate cyclase LFZ88_RS18860 PF01139 tRNA-splicing ligase RtcB LFZ88_RS18870 PF00158 Sigma-54 interaction domain LFZ88_RS18870 PF06956 Regulator of RNA terminal phosphate cyclase LFZ88_RS18875 PF00455 DeoR C terminal sensor domain LFZ88_RS18875 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS18880 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LFZ88_RS18880 PF01694 Rhomboid family LFZ88_RS18885 PF00581 Rhodanese-like domain LFZ88_RS18890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LFZ88_RS18890 PF01266 FAD dependent oxidoreductase LFZ88_RS18905 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS18910 PF07690 Major Facilitator Superfamily LFZ88_RS18915 PF00920 Dehydratase family LFZ88_RS18920 PF00701 Dihydrodipicolinate synthetase family LFZ88_RS18925 PF01614 Bacterial transcriptional regulator LFZ88_RS18925 PF09339 IclR helix-turn-helix domain LFZ88_RS18930 PF00343 Carbohydrate phosphorylase LFZ88_RS18935 PF08323 Starch synthase catalytic domain LFZ88_RS18935 PF00534 Glycosyl transferases group 1 LFZ88_RS18940 PF00483 Nucleotidyl transferase LFZ88_RS18945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ88_RS18945 PF18390 Glycogen debranching enzyme C-terminal domain LFZ88_RS18945 PF00128 Alpha amylase, catalytic domain LFZ88_RS18950 PF00128 Alpha amylase, catalytic domain LFZ88_RS18950 PF02806 Alpha amylase, C-terminal all-beta domain LFZ88_RS18950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LFZ88_RS18955 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ88_RS18955 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ88_RS18960 PF02447 GntP family permease LFZ88_RS18965 PF01202 Shikimate kinase LFZ88_RS18970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ88_RS18970 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS18975 PF17954 Quercetinase C-terminal cupin domain LFZ88_RS18975 PF02678 Pirin LFZ88_RS18980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFZ88_RS18980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFZ88_RS18985 PF00583 Acetyltransferase (GNAT) family LFZ88_RS18990 PF00294 pfkB family carbohydrate kinase LFZ88_RS19005 PF02126 Phosphotriesterase family LFZ88_RS19015 PF10956 Protein of unknown function (DUF2756) LFZ88_RS19020 PF03009 Glycerophosphoryl diester phosphodiesterase family LFZ88_RS19025 PF00005 ABC transporter LFZ88_RS19025 PF17912 MalK OB fold domain LFZ88_RS19030 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS19035 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS19040 PF13416 Bacterial extracellular solute-binding protein LFZ88_RS19050 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LFZ88_RS19055 PF00005 ABC transporter LFZ88_RS19060 PF00005 ABC transporter LFZ88_RS19060 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFZ88_RS19065 PF11862 Domain of unknown function (DUF3382) LFZ88_RS19065 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS19070 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS19075 PF13458 Periplasmic binding protein LFZ88_RS19080 PF12568 Acetyltransferase (GNAT) domain, PanZ LFZ88_RS19085 PF13458 Periplasmic binding protein LFZ88_RS19090 PF04545 Sigma-70, region 4 LFZ88_RS19090 PF04542 Sigma-70 region 2 LFZ88_RS19095 PF18075 FtsX extracellular domain LFZ88_RS19095 PF02687 FtsX-like permease family LFZ88_RS19100 PF00005 ABC transporter LFZ88_RS19105 PF02881 SRP54-type protein, helical bundle domain LFZ88_RS19105 PF00448 SRP54-type protein, GTPase domain LFZ88_RS19115 PF06611 Protein of unknown function (DUF1145) LFZ88_RS19120 PF10694 Protein of unknown function (DUF2500) LFZ88_RS19125 PF07947 YhhN family LFZ88_RS19130 PF00403 Heavy-metal-associated domain LFZ88_RS19135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS19135 PF02203 Tar ligand binding domain homologue LFZ88_RS19135 PF00672 HAMP domain LFZ88_RS19140 PF01206 Sulfurtransferase TusA LFZ88_RS19145 PF02592 Putative vitamin uptake transporter LFZ88_RS19150 PF08786 DcrB LFZ88_RS19155 PF07690 Major Facilitator Superfamily LFZ88_RS19160 PF01594 AI-2E family transporter LFZ88_RS19165 PF01648 4'-phosphopantetheinyl transferase superfamily LFZ88_RS19170 PF01402 Ribbon-helix-helix protein, copG family LFZ88_RS19170 PF08753 NikR C terminal nickel binding domain LFZ88_RS19180 PF00005 ABC transporter LFZ88_RS19185 PF13533 Biotin-lipoyl like LFZ88_RS19195 PF01384 Phosphate transporter family LFZ88_RS19200 PF10625 Universal stress protein B (UspB) LFZ88_RS19205 PF00582 Universal stress protein family LFZ88_RS19210 PF00854 POT family LFZ88_RS19215 PF04445 Putative SAM-dependent methyltransferase LFZ88_RS19220 PF01432 Peptidase family M3 LFZ88_RS19225 PF01569 PAP2 superfamily LFZ88_RS19230 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LFZ88_RS19235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ88_RS19235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS19240 PF17763 Glutaminase/Asparaginase C-terminal domain LFZ88_RS19240 PF00710 Asparaginase, N-terminal LFZ88_RS19245 PF03605 Anaerobic c4-dicarboxylate membrane transporter LFZ88_RS19250 PF00294 pfkB family carbohydrate kinase LFZ88_RS19255 PF01380 SIS domain LFZ88_RS19260 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS19260 PF07702 UTRA domain LFZ88_RS19265 PF01204 Trehalase LFZ88_RS19280 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS19285 PF03466 LysR substrate binding domain LFZ88_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS19290 PF03631 Virulence factor BrkB LFZ88_RS19295 PF00083 Sugar (and other) transporter LFZ88_RS19295 PF07690 Major Facilitator Superfamily LFZ88_RS19300 PF05170 AsmA family LFZ88_RS19305 PF00563 EAL domain LFZ88_RS19310 PF00294 pfkB family carbohydrate kinase LFZ88_RS19315 PF00675 Insulinase (Peptidase family M16) LFZ88_RS19315 PF05193 Peptidase M16 inactive domain LFZ88_RS19320 PF00375 Sodium:dicarboxylate symporter family LFZ88_RS19325 PF00672 HAMP domain LFZ88_RS19325 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS19325 PF17154 Gammaproteobacterial periplasmic sensor domain LFZ88_RS19325 PF00563 EAL domain LFZ88_RS19335 PF13176 Tetratricopeptide repeat LFZ88_RS19335 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LFZ88_RS19340 PF01270 Glycosyl hydrolases family 8 LFZ88_RS19345 PF03170 Bacterial cellulose synthase subunit LFZ88_RS19350 PF07238 PilZ domain LFZ88_RS19350 PF00535 Glycosyl transferase family 2 LFZ88_RS19355 PF06564 Cellulose biosynthesis protein BcsQ LFZ88_RS19360 PF10945 Cellulose biosynthesis protein BcsR LFZ88_RS19365 PF10995 Cellulose biosynthesis GIL LFZ88_RS19370 PF11120 Cellulose biosynthesis protein BcsF LFZ88_RS19375 PF11658 Cellulose biosynthesis protein BcsG LFZ88_RS19380 PF13940 Toxin Ldr, type I toxin-antitoxin system LFZ88_RS19385 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ88_RS19390 PF03222 Tryptophan/tyrosine permease family LFZ88_RS19395 PF00005 ABC transporter LFZ88_RS19395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS19400 PF00005 ABC transporter LFZ88_RS19400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFZ88_RS19405 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS19405 PF12911 N-terminal TM domain of oligopeptide transport permease C LFZ88_RS19410 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS19420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS19425 PF00860 Permease family LFZ88_RS19435 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS19455 PF08019 Phosphoethanolamine transferase EptA/EptB LFZ88_RS19455 PF00884 Sulfatase LFZ88_RS19460 PF00419 Fimbrial protein LFZ88_RS19465 PF00419 Fimbrial protein LFZ88_RS19470 PF13953 PapC C-terminal domain LFZ88_RS19470 PF00577 Outer membrane usher protein LFZ88_RS19470 PF13954 PapC N-terminal domain LFZ88_RS19475 PF13954 PapC N-terminal domain LFZ88_RS19475 PF00577 Outer membrane usher protein LFZ88_RS19475 PF13953 PapC C-terminal domain LFZ88_RS19480 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS19480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS19485 PF00419 Fimbrial protein LFZ88_RS19490 PF03797 Autotransporter beta-domain LFZ88_RS19495 PF03352 Methyladenine glycosylase LFZ88_RS19500 PF00583 Acetyltransferase (GNAT) family LFZ88_RS19505 PF18364 Molybdopterin oxidoreductase N-terminal domain LFZ88_RS19505 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS19505 PF00384 Molybdopterin oxidoreductase LFZ88_RS19510 PF00691 OmpA family LFZ88_RS19510 PF13488 Glycine zipper LFZ88_RS19515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFZ88_RS19515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFZ88_RS19520 PF11254 Protein of unknown function (DUF3053) LFZ88_RS19525 PF01381 Helix-turn-helix LFZ88_RS19530 PF00313 'Cold-shock' DNA-binding domain LFZ88_RS19555 PF13333 Integrase core domain LFZ88_RS19555 PF13276 HTH-like domain LFZ88_RS19555 PF00665 Integrase core domain LFZ88_RS19560 PF02092 Glycyl-tRNA synthetase beta subunit LFZ88_RS19560 PF05746 DALR anticodon binding domain LFZ88_RS19565 PF02091 Glycyl-tRNA synthetase alpha subunit LFZ88_RS19570 PF13983 YsaB-like lipoprotein LFZ88_RS19580 PF01757 Acyltransferase family LFZ88_RS19585 PF05360 yiaA/B two helix domain LFZ88_RS19590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS19590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS19605 PF12833 Helix-turn-helix domain LFZ88_RS19610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LFZ88_RS19615 PF00128 Alpha amylase, catalytic domain LFZ88_RS19620 PF00155 Aminotransferase class I and II LFZ88_RS19625 PF13247 4Fe-4S dicluster domain LFZ88_RS19630 PF09339 IclR helix-turn-helix domain LFZ88_RS19630 PF01614 Bacterial transcriptional regulator LFZ88_RS19635 PF02615 Malate/L-lactate dehydrogenase LFZ88_RS19640 PF04074 YhcH/YjgK/YiaL LFZ88_RS19645 PF16154 Domain of unknown function (DUF4862) LFZ88_RS19650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LFZ88_RS19655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LFZ88_RS19660 PF03480 Bacterial extracellular solute-binding protein, family 7 LFZ88_RS19665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS19665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS19670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ88_RS19675 PF01261 Xylose isomerase-like TIM barrel LFZ88_RS19680 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS19690 PF07944 Beta-L-arabinofuranosidase, GH127 LFZ88_RS19695 PF00171 Aldehyde dehydrogenase family LFZ88_RS19700 PF00480 ROK family LFZ88_RS19705 PF09106 Elongation factor SelB, winged helix LFZ88_RS19705 PF03144 Elongation factor Tu domain 2 LFZ88_RS19705 PF09107 Elongation factor SelB, winged helix LFZ88_RS19705 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS19710 PF03841 L-seryl-tRNA selenium transferase LFZ88_RS19710 PF12390 Selenocysteine synthase N terminal LFZ88_RS19715 PF13417 Glutathione S-transferase, N-terminal domain LFZ88_RS19715 PF00043 Glutathione S-transferase, C-terminal domain LFZ88_RS19720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS19720 PF02378 Phosphotransferase system, EIIC LFZ88_RS19720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS19730 PF08125 Mannitol dehydrogenase C-terminal domain LFZ88_RS19730 PF01232 Mannitol dehydrogenase Rossmann domain LFZ88_RS19735 PF05068 Mannitol repressor LFZ88_RS19745 PF10928 Protein of unknown function (DUF2810) LFZ88_RS19755 PF11622 Protein of unknown function (DUF3251) LFZ88_RS19760 PF03895 YadA-like membrane anchor domain LFZ88_RS19760 PF13018 Extended Signal Peptide of Type V secretion system LFZ88_RS19760 PF05658 Head domain of trimeric autotransporter adhesin LFZ88_RS19760 PF05662 Coiled stalk of trimeric autotransporter adhesin LFZ88_RS19765 PF02652 L-lactate permease LFZ88_RS19770 PF07729 FCD domain LFZ88_RS19770 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS19775 PF01070 FMN-dependent dehydrogenase LFZ88_RS19780 PF00588 SpoU rRNA Methylase family LFZ88_RS19785 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS19795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS19795 PF13378 Enolase C-terminal domain-like LFZ88_RS19800 PF07690 Major Facilitator Superfamily LFZ88_RS19805 PF06426 Serine acetyltransferase, N-terminal LFZ88_RS19805 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS19810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFZ88_RS19810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFZ88_RS19815 PF02556 Preprotein translocase subunit SecB LFZ88_RS19820 PF00462 Glutaredoxin LFZ88_RS19825 PF00581 Rhodanese-like domain LFZ88_RS19830 PF01676 Metalloenzyme superfamily LFZ88_RS19830 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LFZ88_RS19835 PF01551 Peptidase family M23 LFZ88_RS19840 PF04748 Divergent polysaccharide deacetylase LFZ88_RS19845 PF00535 Glycosyl transferase family 2 LFZ88_RS19850 PF00107 Zinc-binding dehydrogenase LFZ88_RS19850 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS19855 PF00155 Aminotransferase class I and II LFZ88_RS19860 PF01370 NAD dependent epimerase/dehydratase family LFZ88_RS19865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ88_RS19870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ88_RS19875 PF04932 O-Antigen ligase LFZ88_RS19880 PF00534 Glycosyl transferases group 1 LFZ88_RS19890 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) LFZ88_RS19895 PF08437 Glycosyl transferase family 8 C-terminal LFZ88_RS19895 PF01501 Glycosyl transferase family 8 LFZ88_RS19900 PF08437 Glycosyl transferase family 8 C-terminal LFZ88_RS19900 PF01501 Glycosyl transferase family 8 LFZ88_RS19905 PF00534 Glycosyl transferases group 1 LFZ88_RS19905 PF13439 Glycosyltransferase Family 4 LFZ88_RS19920 PF13439 Glycosyltransferase Family 4 LFZ88_RS19920 PF00534 Glycosyl transferases group 1 LFZ88_RS19925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFZ88_RS19930 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LFZ88_RS19935 PF01467 Cytidylyltransferase-like LFZ88_RS19940 PF06827 Zinc finger found in FPG and IleRS LFZ88_RS19940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFZ88_RS19940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFZ88_RS19945 PF00471 Ribosomal protein L33 LFZ88_RS19950 PF00830 Ribosomal L28 family LFZ88_RS19955 PF04002 RadC-like JAB domain LFZ88_RS19960 PF04127 DNA / pantothenate metabolism flavoprotein LFZ88_RS19960 PF02441 Flavoprotein LFZ88_RS19965 PF00692 dUTPase LFZ88_RS19970 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS19975 PF00156 Phosphoribosyl transferase domain LFZ88_RS19980 PF01138 3' exoribonuclease family, domain 1 LFZ88_RS19980 PF03725 3' exoribonuclease family, domain 2 LFZ88_RS19990 PF08340 Domain of unknown function (DUF1732) LFZ88_RS19990 PF03755 YicC-like family, N-terminal region LFZ88_RS19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS19995 PF03466 LysR substrate binding domain LFZ88_RS20005 PF03458 UPF0126 domain LFZ88_RS20010 PF01653 NAD-dependent DNA ligase adenylation domain LFZ88_RS20010 PF03120 NAD-dependent DNA ligase OB-fold domain LFZ88_RS20015 PF00625 Guanylate kinase LFZ88_RS20020 PF01192 RNA polymerase Rpb6 LFZ88_RS20025 PF04607 Region found in RelA / SpoT proteins LFZ88_RS20025 PF02824 TGS domain LFZ88_RS20025 PF13291 ACT domain LFZ88_RS20030 PF00588 SpoU rRNA Methylase family LFZ88_RS20030 PF12105 SpoU, rRNA methylase, C-terminal LFZ88_RS20035 PF00270 DEAD/DEAH box helicase LFZ88_RS20035 PF00271 Helicase conserved C-terminal domain LFZ88_RS20035 PF17191 RecG wedge domain LFZ88_RS20040 PF03616 Sodium/glutamate symporter LFZ88_RS20045 PF00860 Permease family LFZ88_RS20050 PF05170 AsmA family LFZ88_RS20055 PF13802 Galactose mutarotase-like LFZ88_RS20055 PF01055 Glycosyl hydrolases family 31 LFZ88_RS20070 PF01527 Transposase LFZ88_RS20075 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS20080 PF03797 Autotransporter beta-domain LFZ88_RS20090 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS20095 PF00857 Isochorismatase family LFZ88_RS20105 PF00690 Cation transporter/ATPase, N-terminus LFZ88_RS20105 PF00689 Cation transporting ATPase, C-terminus LFZ88_RS20110 PF02308 MgtC family LFZ88_RS20115 PF00892 EamA-like transporter family LFZ88_RS20120 PF04754 Putative transposase, YhgA-like LFZ88_RS20125 PF07071 KDGP aldolase LFZ88_RS20130 PF03841 L-seryl-tRNA selenium transferase LFZ88_RS20135 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ88_RS20140 PF03609 PTS system sorbose-specific iic component LFZ88_RS20150 PF03830 PTS system sorbose subfamily IIB component LFZ88_RS20150 PF03610 PTS system fructose IIA component LFZ88_RS20165 PF00874 PRD domain LFZ88_RS20165 PF00158 Sigma-54 interaction domain LFZ88_RS20175 PF00232 Glycosyl hydrolase family 1 LFZ88_RS20180 PF07690 Major Facilitator Superfamily LFZ88_RS20195 PF06711 Protein of unknown function (DUF1198) LFZ88_RS20200 PF07690 Major Facilitator Superfamily LFZ88_RS20205 PF07690 Major Facilitator Superfamily LFZ88_RS20210 PF05231 MASE1 LFZ88_RS20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS20210 PF07730 Histidine kinase LFZ88_RS20215 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS20215 PF00072 Response regulator receiver domain LFZ88_RS20225 PF07690 Major Facilitator Superfamily LFZ88_RS20230 PF00294 pfkB family carbohydrate kinase LFZ88_RS20235 PF00455 DeoR C terminal sensor domain LFZ88_RS20235 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS20240 PF01842 ACT domain LFZ88_RS20245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS20245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS20245 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ88_RS20250 PF08049 IlvB leader peptide LFZ88_RS20255 PF13939 Toxin TisB, type I toxin-antitoxin system LFZ88_RS20265 PF07690 Major Facilitator Superfamily LFZ88_RS20275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS20275 PF03466 LysR substrate binding domain LFZ88_RS20280 PF02447 GntP family permease LFZ88_RS20285 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS20295 PF02656 Domain of unknown function (DUF202) LFZ88_RS20300 PF02656 Domain of unknown function (DUF202) LFZ88_RS20305 PF06826 Predicted Permease Membrane Region LFZ88_RS20305 PF02080 TrkA-C domain LFZ88_RS20310 PF00011 Hsp20/alpha crystallin family LFZ88_RS20315 PF00011 Hsp20/alpha crystallin family LFZ88_RS20320 PF07119 Protein of unknown function (DUF1375) LFZ88_RS20325 PF12566 Protein of unknown function (DUF3748) LFZ88_RS20325 PF07676 WD40-like Beta Propeller Repeat LFZ88_RS20330 PF03918 Cytochrome C biogenesis protein LFZ88_RS20335 PF08534 Redoxin LFZ88_RS20340 PF01578 Cytochrome C assembly protein LFZ88_RS20340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ88_RS20345 PF03100 CcmE LFZ88_RS20350 PF04995 Heme exporter protein D (CcmD) LFZ88_RS20355 PF01578 Cytochrome C assembly protein LFZ88_RS20360 PF03379 CcmB protein LFZ88_RS20365 PF00005 ABC transporter LFZ88_RS20370 PF00034 Cytochrome c LFZ88_RS20370 PF03150 Di-haem cytochrome c peroxidase LFZ88_RS20370 PF14376 Haem-binding domain LFZ88_RS20375 PF02613 Nitrate reductase delta subunit LFZ88_RS20380 PF18364 Molybdopterin oxidoreductase N-terminal domain LFZ88_RS20380 PF00384 Molybdopterin oxidoreductase LFZ88_RS20380 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS20385 PF03264 NapC/NirT cytochrome c family, N-terminal region LFZ88_RS20390 PF00072 Response regulator receiver domain LFZ88_RS20390 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS20395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LFZ88_RS20400 PF00072 Response regulator receiver domain LFZ88_RS20400 PF00672 HAMP domain LFZ88_RS20400 PF01627 Hpt domain LFZ88_RS20400 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS20400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS20405 PF07690 Major Facilitator Superfamily LFZ88_RS20410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS20410 PF13378 Enolase C-terminal domain-like LFZ88_RS20415 PF01081 KDPG and KHG aldolase LFZ88_RS20420 PF05035 2-keto-3-deoxy-galactonokinase LFZ88_RS20425 PF07729 FCD domain LFZ88_RS20425 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS20435 PF07690 Major Facilitator Superfamily LFZ88_RS20440 PF13378 Enolase C-terminal domain-like LFZ88_RS20440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LFZ88_RS20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS20445 PF03466 LysR substrate binding domain LFZ88_RS20450 PF18053 DNA gyrase B subunit insert domain LFZ88_RS20450 PF00986 DNA gyrase B subunit, carboxyl terminus LFZ88_RS20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS20450 PF01751 Toprim domain LFZ88_RS20450 PF00204 DNA gyrase B LFZ88_RS20455 PF02463 RecF/RecN/SMC N terminal domain LFZ88_RS20460 PF02768 DNA polymerase III beta subunit, C-terminal domain LFZ88_RS20460 PF00712 DNA polymerase III beta subunit, N-terminal domain LFZ88_RS20460 PF02767 DNA polymerase III beta subunit, central domain LFZ88_RS20465 PF11638 DnaA N-terminal domain LFZ88_RS20465 PF00308 Bacterial dnaA protein LFZ88_RS20465 PF08299 Bacterial dnaA protein helix-turn-helix LFZ88_RS20470 PF00468 Ribosomal protein L34 LFZ88_RS20475 PF00825 Ribonuclease P LFZ88_RS20480 PF01809 Putative membrane protein insertion efficiency factor LFZ88_RS20485 PF02096 60Kd inner membrane protein LFZ88_RS20485 PF14849 YidC periplasmic domain LFZ88_RS20490 PF12631 MnmE helical domain LFZ88_RS20490 PF01926 50S ribosome-binding GTPase LFZ88_RS20490 PF10396 GTP-binding protein TrmE N-terminus LFZ88_RS20500 PF13356 Arm DNA-binding domain LFZ88_RS20500 PF00589 Phage integrase family LFZ88_RS20505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFZ88_RS20520 PF07690 Major Facilitator Superfamily LFZ88_RS20525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS20525 PF03466 LysR substrate binding domain LFZ88_RS20535 PF03358 NADPH-dependent FMN reductase LFZ88_RS20540 PF00860 Permease family LFZ88_RS20545 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS20550 PF01895 PhoU domain LFZ88_RS20555 PF00005 ABC transporter LFZ88_RS20560 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS20565 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS20570 PF12849 PBP superfamily domain LFZ88_RS20575 PF02378 Phosphotransferase system, EIIC LFZ88_RS20575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS20580 PF08501 Shikimate dehydrogenase substrate binding domain LFZ88_RS20585 PF12793 Sugar transport-related sRNA regulator N-term LFZ88_RS20585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFZ88_RS20590 PF01380 SIS domain LFZ88_RS20595 PF12804 MobA-like NTP transferase domain LFZ88_RS20595 PF00132 Bacterial transferase hexapeptide (six repeats) LFZ88_RS20610 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LFZ88_RS20610 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFZ88_RS20615 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ88_RS20615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS20620 PF00231 ATP synthase LFZ88_RS20625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS20625 PF00306 ATP synthase alpha/beta chain, C terminal domain LFZ88_RS20625 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFZ88_RS20630 PF00213 ATP synthase delta (OSCP) subunit LFZ88_RS20635 PF00430 ATP synthase B/B' CF(0) LFZ88_RS20640 PF00137 ATP synthase subunit C LFZ88_RS20645 PF00119 ATP synthase A chain LFZ88_RS20650 PF03899 ATP synthase I chain LFZ88_RS20655 PF02527 rRNA small subunit methyltransferase G LFZ88_RS20660 PF13932 GidA associated domain LFZ88_RS20660 PF01134 Glucose inhibited division protein A LFZ88_RS20670 PF00258 Flavodoxin LFZ88_RS20675 PF01037 Lrp/AsnC ligand binding domain LFZ88_RS20680 PF03590 Aspartate-ammonia ligase LFZ88_RS20685 PF05762 VWA domain containing CoxE-like protein LFZ88_RS20690 PF07728 AAA domain (dynein-related subfamily) LFZ88_RS20690 PF12592 Protein of unknown function (DUF3763) LFZ88_RS20690 PF17868 AAA lid domain LFZ88_RS20695 PF02705 K+ potassium transporter LFZ88_RS20700 PF05025 RbsD / FucU transport protein family LFZ88_RS20705 PF00005 ABC transporter LFZ88_RS20710 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS20715 PF13407 Periplasmic binding protein domain LFZ88_RS20720 PF00294 pfkB family carbohydrate kinase LFZ88_RS20725 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS20730 PF07690 Major Facilitator Superfamily LFZ88_RS20735 PF07729 FCD domain LFZ88_RS20735 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS20770 PF03466 LysR substrate binding domain LFZ88_RS20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS20775 PF04219 Protein of unknown function, DUF LFZ88_RS20780 PF01078 Magnesium chelatase, subunit ChlI LFZ88_RS20780 PF13335 Magnesium chelatase, subunit ChlI C-terminal LFZ88_RS20785 PF08046 IlvGEDA operon leader peptide LFZ88_RS20790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFZ88_RS20790 PF00205 Thiamine pyrophosphate enzyme, central domain LFZ88_RS20790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFZ88_RS20800 PF01063 Amino-transferase class IV LFZ88_RS20805 PF00920 Dehydratase family LFZ88_RS20810 PF00585 C-terminal regulatory domain of Threonine dehydratase LFZ88_RS20810 PF00291 Pyridoxal-phosphate dependent enzyme LFZ88_RS20825 PF03466 LysR substrate binding domain LFZ88_RS20825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS20830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFZ88_RS20830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LFZ88_RS20845 PF00580 UvrD/REP helicase N-terminal domain LFZ88_RS20845 PF13361 UvrD-like helicase C-terminal domain LFZ88_RS20850 PF02541 Ppx/GppA phosphatase family LFZ88_RS20855 PF00271 Helicase conserved C-terminal domain LFZ88_RS20855 PF00270 DEAD/DEAH box helicase LFZ88_RS20860 PF00085 Thioredoxin LFZ88_RS20870 PF07498 Rho termination factor, N-terminal domain LFZ88_RS20870 PF07497 Rho termination factor, RNA-binding domain LFZ88_RS20870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFZ88_RS20875 PF00953 Glycosyl transferase family 4 LFZ88_RS20880 PF02706 Chain length determinant protein LFZ88_RS20885 PF02350 UDP-N-acetylglucosamine 2-epimerase LFZ88_RS20890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFZ88_RS20890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFZ88_RS20890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFZ88_RS20895 PF16363 GDP-mannose 4,6 dehydratase LFZ88_RS20900 PF00483 Nucleotidyl transferase LFZ88_RS20910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFZ88_RS20915 PF01943 Polysaccharide biosynthesis protein LFZ88_RS20920 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LFZ88_RS20925 PF06899 WzyE protein, O-antigen assembly polymerase LFZ88_RS20930 PF03808 Glycosyl transferase WecB/TagA/CpsF family LFZ88_RS20935 PF00324 Amino acid permease LFZ88_RS20960 PF07719 Tetratricopeptide repeat LFZ88_RS20960 PF07219 HemY protein N-terminus LFZ88_RS20965 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LFZ88_RS20970 PF02602 Uroporphyrinogen-III synthase HemD LFZ88_RS20975 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFZ88_RS20975 PF03900 Porphobilinogen deaminase, C-terminal domain LFZ88_RS20985 PF01295 Adenylate cyclase, class-I LFZ88_RS20985 PF12633 Adenylate cyclase NT domain LFZ88_RS20990 PF01491 Frataxin-like domain LFZ88_RS21010 PF13627 Prokaryotic lipoprotein-attachment site LFZ88_RS21015 PF01678 Diaminopimelate epimerase LFZ88_RS21020 PF04340 Protein of unknown function, DUF484 LFZ88_RS21025 PF00589 Phage integrase family LFZ88_RS21025 PF02899 Phage integrase, N-terminal SAM-like domain LFZ88_RS21030 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS21035 PF00580 UvrD/REP helicase N-terminal domain LFZ88_RS21035 PF13361 UvrD-like helicase C-terminal domain LFZ88_RS21045 PF01544 CorA-like Mg2+ transporter protein LFZ88_RS21060 PF00892 EamA-like transporter family LFZ88_RS21065 PF03061 Thioesterase superfamily LFZ88_RS21070 PF02253 Phospholipase A1 LFZ88_RS21075 PF16124 RecQ zinc-binding LFZ88_RS21075 PF00270 DEAD/DEAH box helicase LFZ88_RS21075 PF00271 Helicase conserved C-terminal domain LFZ88_RS21075 PF00570 HRDC domain LFZ88_RS21075 PF09382 RQC domain LFZ88_RS21080 PF01810 LysE type translocator LFZ88_RS21085 PF01810 LysE type translocator LFZ88_RS21090 PF12146 Serine aminopeptidase, S33 LFZ88_RS21100 PF00892 EamA-like transporter family LFZ88_RS21105 PF03466 LysR substrate binding domain LFZ88_RS21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS21110 PF01717 Cobalamin-independent synthase, Catalytic domain LFZ88_RS21110 PF08267 Cobalamin-independent synthase, N-terminal domain LFZ88_RS21115 PF04055 Radical SAM superfamily LFZ88_RS21115 PF13186 Iron-sulfur cluster-binding domain LFZ88_RS21120 PF01738 Dienelactone hydrolase family LFZ88_RS21125 PF01048 Phosphorylase superfamily LFZ88_RS21130 PF02646 RmuC family LFZ88_RS21135 PF01209 ubiE/COQ5 methyltransferase family LFZ88_RS21140 PF02036 SCP-2 sterol transfer family LFZ88_RS21145 PF03109 ABC1 family LFZ88_RS21150 PF02416 mttA/Hcf106 family LFZ88_RS21160 PF00902 Sec-independent protein translocase protein (TatC) LFZ88_RS21165 PF01026 TatD related DNase LFZ88_RS21170 PF02357 Transcription termination factor nusG LFZ88_RS21175 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LFZ88_RS21180 PF00970 Oxidoreductase FAD-binding domain LFZ88_RS21180 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS21185 PF05935 Arylsulfotransferase (ASST) LFZ88_RS21185 PF17425 Arylsulfotransferase Ig-like domain LFZ88_RS21190 PF02803 Thiolase, C-terminal domain LFZ88_RS21190 PF00108 Thiolase, N-terminal domain LFZ88_RS21195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LFZ88_RS21195 PF00378 Enoyl-CoA hydratase/isomerase LFZ88_RS21195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LFZ88_RS21200 PF00557 Metallopeptidase family M24 LFZ88_RS21205 PF09186 Domain of unknown function (DUF1949) LFZ88_RS21205 PF01205 Uncharacterized protein family UPF0029 LFZ88_RS21210 PF02386 Cation transport protein LFZ88_RS21215 PF12724 Flavodoxin domain LFZ88_RS21255 PF13276 HTH-like domain LFZ88_RS21255 PF00665 Integrase core domain LFZ88_RS21255 PF13333 Integrase core domain LFZ88_RS21265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LFZ88_RS21270 PF12804 MobA-like NTP transferase domain LFZ88_RS21275 PF06288 Protein of unknown function (DUF1040) LFZ88_RS21280 PF01636 Phosphotransferase enzyme family LFZ88_RS21285 PF01323 DSBA-like thioredoxin domain LFZ88_RS21290 PF01553 Acyltransferase LFZ88_RS21300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFZ88_RS21300 PF01367 5'-3' exonuclease, C-terminal SAM fold LFZ88_RS21300 PF00476 DNA polymerase family A LFZ88_RS21300 PF01612 3'-5' exonuclease LFZ88_RS21305 PF01926 50S ribosome-binding GTPase LFZ88_RS21315 PF04220 Der GTPase activator (YihI) LFZ88_RS21320 PF04055 Radical SAM superfamily LFZ88_RS21320 PF06969 HemN C-terminal domain LFZ88_RS21325 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS21325 PF00158 Sigma-54 interaction domain LFZ88_RS21325 PF00072 Response regulator receiver domain LFZ88_RS21330 PF00989 PAS fold LFZ88_RS21330 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS21345 PF00120 Glutamine synthetase, catalytic domain LFZ88_RS21345 PF03951 Glutamine synthetase, beta-Grasp domain LFZ88_RS21355 PF03144 Elongation factor Tu domain 2 LFZ88_RS21355 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS21355 PF00679 Elongation factor G C-terminus LFZ88_RS21370 PF04055 Radical SAM superfamily LFZ88_RS21390 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ88_RS21405 PF01055 Glycosyl hydrolases family 31 LFZ88_RS21415 PF01263 Aldose 1-epimerase LFZ88_RS21425 PF01791 DeoC/LacD family aldolase LFZ88_RS21430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFZ88_RS21430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFZ88_RS21435 PF00294 pfkB family carbohydrate kinase LFZ88_RS21440 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS21440 PF00455 DeoR C terminal sensor domain LFZ88_RS21445 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS21450 PF03631 Virulence factor BrkB LFZ88_RS21455 PF02580 D-Tyr-tRNA(Tyr) deacylase LFZ88_RS21460 PF09500 Putative thioesterase (yiiD_Cterm) LFZ88_RS21460 PF00583 Acetyltransferase (GNAT) family LFZ88_RS21465 PF01381 Helix-turn-helix LFZ88_RS21470 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system LFZ88_RS21475 PF07859 alpha/beta hydrolase fold LFZ88_RS21480 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system LFZ88_RS21490 PF04216 Protein involved in formate dehydrogenase formation LFZ88_RS21495 PF01292 Prokaryotic cytochrome b561 LFZ88_RS21500 PF13247 4Fe-4S dicluster domain LFZ88_RS21500 PF09163 Formate dehydrogenase N, transmembrane LFZ88_RS21505 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS21505 PF00384 Molybdopterin oxidoreductase LFZ88_RS21505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS21510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS21510 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS21510 PF00384 Molybdopterin oxidoreductase LFZ88_RS21515 PF02634 FdhD/NarQ family LFZ88_RS21520 PF12889 Protein of unknown function (DUF3829) LFZ88_RS21535 PF03591 AzlC protein LFZ88_RS21545 PF05336 L-rhamnose mutarotase LFZ88_RS21550 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS21555 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS21560 PF06134 L-rhamnose isomerase (RhaA) LFZ88_RS21565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS21565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS21570 PF02311 AraC-like ligand binding domain LFZ88_RS21570 PF12833 Helix-turn-helix domain LFZ88_RS21575 PF12833 Helix-turn-helix domain LFZ88_RS21575 PF02311 AraC-like ligand binding domain LFZ88_RS21580 PF06379 L-rhamnose-proton symport protein (RhaT) LFZ88_RS21585 PF06178 Oligogalacturonate-specific porin protein (KdgM) LFZ88_RS21590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LFZ88_RS21595 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LFZ88_RS21600 PF03480 Bacterial extracellular solute-binding protein, family 7 LFZ88_RS21605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LFZ88_RS21605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LFZ88_RS21610 PF03473 MOSC domain LFZ88_RS21610 PF03475 3-alpha domain LFZ88_RS21620 PF00672 HAMP domain LFZ88_RS21620 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS21620 PF16527 Two-component sensor protein CpxA, periplasmic domain LFZ88_RS21620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS21625 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS21625 PF00072 Response regulator receiver domain LFZ88_RS21630 PF07813 LTXXQ motif family protein LFZ88_RS21635 PF00589 Phage integrase family LFZ88_RS21635 PF02899 Phage integrase, N-terminal SAM-like domain LFZ88_RS21675 PF05840 Bacteriophage replication gene A protein (GPA) LFZ88_RS21770 PF03335 Phage tail fibre repeat LFZ88_RS21770 PF08400 Prophage tail fibre N-terminal LFZ88_RS21770 PF07484 Phage Tail Collar Domain LFZ88_RS21770 PF03335 Phage tail fibre repeat LFZ88_RS21770 PF08400 Prophage tail fibre N-terminal LFZ88_RS21770 PF07484 Phage Tail Collar Domain LFZ88_RS21775 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS21815 PF04606 Ogr/Delta-like zinc finger LFZ88_RS21825 PF01545 Cation efflux family LFZ88_RS21825 PF16916 Dimerisation domain of Zinc Transporter LFZ88_RS21830 PF00365 Phosphofructokinase LFZ88_RS21840 PF02611 CDP-diacylglycerol pyrophosphatase LFZ88_RS21850 PF00294 pfkB family carbohydrate kinase LFZ88_RS21860 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS21860 PF00155 Aminotransferase class I and II LFZ88_RS21865 PF02611 CDP-diacylglycerol pyrophosphatase LFZ88_RS21875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS21875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS21880 PF04198 Putative sugar-binding domain LFZ88_RS21885 PF00005 ABC transporter LFZ88_RS21890 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS21895 PF02653 Branched-chain amino acid transport system / permease component LFZ88_RS21900 PF13407 Periplasmic binding protein domain LFZ88_RS21905 PF01791 DeoC/LacD family aldolase LFZ88_RS21910 PF03992 Antibiotic biosynthesis monooxygenase LFZ88_RS21915 PF00834 Ribulose-phosphate 3 epimerase family LFZ88_RS21920 PF00121 Triosephosphate isomerase LFZ88_RS21925 PF07305 Protein of unknown function (DUF1454) LFZ88_RS21930 PF05656 Protein of unknown function (DUF805) LFZ88_RS21935 PF00175 Oxidoreductase NAD-binding domain LFZ88_RS21935 PF00970 Oxidoreductase FAD-binding domain LFZ88_RS21940 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LFZ88_RS21945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LFZ88_RS21945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LFZ88_RS21950 PF00230 Major intrinsic protein LFZ88_RS21955 PF06005 Cell division protein ZapB LFZ88_RS21960 PF03737 Aldolase/RraA LFZ88_RS21965 PF01040 UbiA prenyltransferase family LFZ88_RS21970 PF10431 C-terminal, D2-small domain, of ClpB protein LFZ88_RS21970 PF07724 AAA domain (Cdc48 subfamily) LFZ88_RS21970 PF00004 ATPase family associated with various cellular activities (AAA) LFZ88_RS21975 PF00227 Proteasome subunit LFZ88_RS21980 PF05036 Sporulation related domain LFZ88_RS21985 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS21990 PF00270 DEAD/DEAH box helicase LFZ88_RS21990 PF18074 Primosomal protein N C-terminal domain LFZ88_RS21990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LFZ88_RS21990 PF17764 3′ DNA-binding domain (3′BD) LFZ88_RS21990 PF00271 Helicase conserved C-terminal domain LFZ88_RS21995 PF01197 Ribosomal protein L31 LFZ88_RS22005 PF05935 Arylsulfotransferase (ASST) LFZ88_RS22005 PF17425 Arylsulfotransferase Ig-like domain LFZ88_RS22010 PF01340 Met Apo-repressor, MetJ LFZ88_RS22015 PF01053 Cys/Met metabolism PLP-dependent enzyme LFZ88_RS22020 PF00696 Amino acid kinase family LFZ88_RS22020 PF00742 Homoserine dehydrogenase LFZ88_RS22020 PF03447 Homoserine dehydrogenase, NAD binding domain LFZ88_RS22025 PF05552 Conserved TM helix LFZ88_RS22025 PF00924 Mechanosensitive ion channel LFZ88_RS22040 PF00149 Calcineurin-like phosphoesterase LFZ88_RS22040 PF17936 Bacterial Ig domain LFZ88_RS22040 PF02872 5'-nucleotidase, C-terminal domain LFZ88_RS22045 PF02219 Methylenetetrahydrofolate reductase LFZ88_RS22050 PF00141 Peroxidase LFZ88_RS22055 PF06940 Domain of unknown function (DUF1287) LFZ88_RS22060 PF00465 Iron-containing alcohol dehydrogenase LFZ88_RS22065 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFZ88_RS22070 PF00391 PEP-utilising enzyme, mobile domain LFZ88_RS22070 PF02896 PEP-utilising enzyme, TIM barrel domain LFZ88_RS22070 PF00381 PTS HPr component phosphorylation site LFZ88_RS22070 PF05524 PEP-utilising enzyme, N-terminal LFZ88_RS22070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS22080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS22085 PF02901 Pyruvate formate lyase-like LFZ88_RS22085 PF01228 Glycine radical LFZ88_RS22090 PF04055 Radical SAM superfamily LFZ88_RS22095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS22100 PF12833 Helix-turn-helix domain LFZ88_RS22105 PF00884 Sulfatase LFZ88_RS22110 PF00311 Phosphoenolpyruvate carboxylase LFZ88_RS22115 PF01546 Peptidase family M20/M25/M40 LFZ88_RS22115 PF07687 Peptidase dimerisation domain LFZ88_RS22120 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFZ88_RS22120 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFZ88_RS22125 PF00696 Amino acid kinase family LFZ88_RS22130 PF00206 Lyase LFZ88_RS22130 PF14698 Argininosuccinate lyase C-terminal LFZ88_RS22140 PF03466 LysR substrate binding domain LFZ88_RS22140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS22145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFZ88_RS22145 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFZ88_RS22155 PF00440 Bacterial regulatory proteins, tetR family LFZ88_RS22160 PF07226 Protein of unknown function (DUF1422) LFZ88_RS22165 PF05958 tRNA (Uracil-5-)-methyltransferase LFZ88_RS22170 PF00593 TonB dependent receptor LFZ88_RS22170 PF07715 TonB-dependent Receptor Plug Domain LFZ88_RS22175 PF01177 Asp/Glu/Hydantoin racemase LFZ88_RS22205 PF01565 FAD binding domain LFZ88_RS22205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFZ88_RS22210 PF03099 Biotin/lipoate A/B protein ligase family LFZ88_RS22210 PF02237 Biotin protein ligase C terminal domain LFZ88_RS22210 PF08279 HTH domain LFZ88_RS22215 PF00485 Phosphoribulokinase / Uridine kinase family LFZ88_RS22240 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS22240 PF03143 Elongation factor Tu C-terminal domain LFZ88_RS22240 PF03144 Elongation factor Tu domain 2 LFZ88_RS22245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LFZ88_RS22250 PF00467 KOW motif LFZ88_RS22250 PF02357 Transcription termination factor nusG LFZ88_RS22255 PF03946 Ribosomal protein L11, N-terminal domain LFZ88_RS22255 PF00298 Ribosomal protein L11, RNA binding domain LFZ88_RS22260 PF00687 Ribosomal protein L1p/L10e family LFZ88_RS22270 PF00466 Ribosomal protein L10 LFZ88_RS22275 PF00542 Ribosomal protein L7/L12 C-terminal domain LFZ88_RS22275 PF16320 Ribosomal protein L7/L12 dimerisation domain LFZ88_RS22280 PF04565 RNA polymerase Rpb2, domain 3 LFZ88_RS22280 PF04561 RNA polymerase Rpb2, domain 2 LFZ88_RS22280 PF04563 RNA polymerase beta subunit LFZ88_RS22280 PF10385 RNA polymerase beta subunit external 1 domain LFZ88_RS22280 PF04560 RNA polymerase Rpb2, domain 7 LFZ88_RS22280 PF00562 RNA polymerase Rpb2, domain 6 LFZ88_RS22285 PF04997 RNA polymerase Rpb1, domain 1 LFZ88_RS22285 PF05000 RNA polymerase Rpb1, domain 4 LFZ88_RS22285 PF04998 RNA polymerase Rpb1, domain 5 LFZ88_RS22285 PF00623 RNA polymerase Rpb1, domain 2 LFZ88_RS22285 PF04983 RNA polymerase Rpb1, domain 3 LFZ88_RS22315 PF06968 Biotin and Thiamin Synthesis associated domain LFZ88_RS22315 PF04055 Radical SAM superfamily LFZ88_RS22320 PF05690 Thiazole biosynthesis protein ThiG LFZ88_RS22325 PF02597 ThiS family LFZ88_RS22330 PF00899 ThiF family LFZ88_RS22335 PF02581 Thiamine monophosphate synthase LFZ88_RS22340 PF01964 Radical SAM ThiC family LFZ88_RS22340 PF13667 ThiC-associated domain LFZ88_RS22345 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LFZ88_RS22350 PF00293 NUDIX domain LFZ88_RS22350 PF09297 NADH pyrophosphatase zinc ribbon domain LFZ88_RS22355 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFZ88_RS22360 PF04493 Endonuclease V LFZ88_RS22365 PF04222 Protein of unknown function (DUF416) LFZ88_RS22370 PF00216 Bacterial DNA-binding protein LFZ88_RS22375 PF07356 Protein of unknown function (DUF1481) LFZ88_RS22380 PF13801 Heavy-metal resistance LFZ88_RS22385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS22385 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS22390 PF00158 Sigma-54 interaction domain LFZ88_RS22390 PF00072 Response regulator receiver domain LFZ88_RS22390 PF02954 Bacterial regulatory protein, Fis family LFZ88_RS22395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFZ88_RS22395 PF02843 Phosphoribosylglycinamide synthetase, C domain LFZ88_RS22395 PF02844 Phosphoribosylglycinamide synthetase, N domain LFZ88_RS22400 PF02142 MGS-like domain LFZ88_RS22400 PF01808 AICARFT/IMPCHase bienzyme LFZ88_RS22430 PF13673 Acetyltransferase (GNAT) domain LFZ88_RS22435 PF04204 Homoserine O-succinyltransferase LFZ88_RS22440 PF01274 Malate synthase LFZ88_RS22445 PF00463 Isocitrate lyase family LFZ88_RS22450 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LFZ88_RS22460 PF09339 IclR helix-turn-helix domain LFZ88_RS22460 PF01614 Bacterial transcriptional regulator LFZ88_RS22465 PF00809 Pterin binding enzyme LFZ88_RS22465 PF02310 B12 binding domain LFZ88_RS22465 PF02574 Homocysteine S-methyltransferase LFZ88_RS22465 PF02607 B12 binding domain LFZ88_RS22465 PF02965 Vitamin B12 dependent methionine synthase, activation domain LFZ88_RS22470 PF02690 Na+/Pi-cotransporter LFZ88_RS22475 PF03575 Peptidase family S51 LFZ88_RS22480 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LFZ88_RS22485 PF00849 RNA pseudouridylate synthase LFZ88_RS22485 PF01479 S4 domain LFZ88_RS22490 PF11656 YjbD family (DUF3811) LFZ88_RS22495 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS22495 PF00455 DeoR C terminal sensor domain LFZ88_RS22515 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LFZ88_RS22520 PF07484 Phage Tail Collar Domain LFZ88_RS22520 PF08400 Prophage tail fibre N-terminal LFZ88_RS22520 PF03335 Phage tail fibre repeat LFZ88_RS22545 PF00535 Glycosyl transferase family 2 LFZ88_RS22550 PF04138 GtrA-like protein LFZ88_RS22625 PF08765 Mor transcription activator family LFZ88_RS22630 PF00696 Amino acid kinase family LFZ88_RS22630 PF01842 ACT domain LFZ88_RS22635 PF00342 Phosphoglucose isomerase LFZ88_RS22645 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF LFZ88_RS22650 PF06251 Capsule biosynthesis GfcC LFZ88_RS22655 PF06082 Exopolysaccharide biosynthesis protein YbjH LFZ88_RS22660 PF06146 Phosphate-starvation-inducible E LFZ88_RS22665 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS22670 PF14785 Maltose transport system permease protein MalF P2 domain LFZ88_RS22670 PF00528 Binding-protein-dependent transport system inner membrane component LFZ88_RS22675 PF01547 Bacterial extracellular solute-binding protein LFZ88_RS22680 PF00005 ABC transporter LFZ88_RS22680 PF17912 MalK OB fold domain LFZ88_RS22685 PF02264 LamB porin LFZ88_RS22690 PF07148 Maltose operon periplasmic protein precursor (MalM) LFZ88_RS22695 PF04345 Chorismate lyase LFZ88_RS22700 PF01040 UbiA prenyltransferase family LFZ88_RS22705 PF01553 Acyltransferase LFZ88_RS22710 PF01219 Prokaryotic diacylglycerol kinase LFZ88_RS22715 PF00717 Peptidase S24-like LFZ88_RS22715 PF01726 LexA DNA binding domain LFZ88_RS22720 PF01554 MatE LFZ88_RS22725 PF05532 CsbD-like LFZ88_RS22730 PF01475 Ferric uptake regulator family LFZ88_RS22740 PF01207 Dihydrouridine synthase (Dus) LFZ88_RS22745 PF09583 Phage shock protein G (Phageshock_PspG) LFZ88_RS22750 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS22750 PF00107 Zinc-binding dehydrogenase LFZ88_RS22755 PF03796 DnaB-like helicase C terminal domain LFZ88_RS22755 PF00772 DnaB-like helicase N terminal domain LFZ88_RS22760 PF01168 Alanine racemase, N-terminal domain LFZ88_RS22760 PF00842 Alanine racemase, C-terminal domain LFZ88_RS22765 PF00155 Aminotransferase class I and II LFZ88_RS22770 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LFZ88_RS22775 PF01894 Uncharacterised protein family UPF0047 LFZ88_RS22780 PF04237 YjbR LFZ88_RS22795 PF17760 UvrA interaction domain LFZ88_RS22795 PF17755 UvrA DNA-binding domain LFZ88_RS22795 PF00005 ABC transporter LFZ88_RS22800 PF00436 Single-strand binding protein family LFZ88_RS22835 PF00005 ABC transporter LFZ88_RS22835 PF00664 ABC transporter transmembrane region LFZ88_RS22840 PF15940 Family of unknown function LFZ88_RS22845 PF00563 EAL domain LFZ88_RS22845 PF12792 CSS motif domain associated with EAL LFZ88_RS22850 PF12833 Helix-turn-helix domain LFZ88_RS22855 PF00376 MerR family regulatory protein LFZ88_RS22855 PF09278 MerR, DNA binding LFZ88_RS22875 PF00860 Permease family LFZ88_RS22885 PF00999 Sodium/hydrogen exchanger family LFZ88_RS22890 PF03466 LysR substrate binding domain LFZ88_RS22890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS22895 PF03788 LrgA family LFZ88_RS22900 PF04172 LrgB-like family LFZ88_RS22905 PF00474 Sodium:solute symporter family LFZ88_RS22910 PF04341 Protein of unknown function, DUF485 LFZ88_RS22915 PF16177 Acetyl-coenzyme A synthetase N-terminus LFZ88_RS22915 PF00501 AMP-binding enzyme LFZ88_RS22915 PF13193 AMP-binding enzyme C-terminal domain LFZ88_RS22925 PF02335 Cytochrome c552 LFZ88_RS22930 PF13435 Cytochrome c554 and c-prime LFZ88_RS22930 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LFZ88_RS22935 PF00037 4Fe-4S binding domain LFZ88_RS22935 PF13247 4Fe-4S dicluster domain LFZ88_RS22940 PF03916 Polysulphide reductase, NrfD LFZ88_RS22945 PF01578 Cytochrome C assembly protein LFZ88_RS22945 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LFZ88_RS22955 PF00375 Sodium:dicarboxylate symporter family LFZ88_RS22960 PF08238 Sel1 repeat LFZ88_RS22965 PF00384 Molybdopterin oxidoreductase LFZ88_RS22965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS22965 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS22970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS22970 PF00384 Molybdopterin oxidoreductase LFZ88_RS22970 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS22980 PF00583 Acetyltransferase (GNAT) family LFZ88_RS22985 PF06983 3-demethylubiquinone-9 3-methyltransferase LFZ88_RS22990 PF08274 PhnA Zinc-Ribbon LFZ88_RS22990 PF03831 PhnA domain LFZ88_RS22995 PF00083 Sugar (and other) transporter LFZ88_RS22995 PF08946 Osmosensory transporter coiled coil LFZ88_RS23000 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS23000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS23005 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS23005 PF00072 Response regulator receiver domain LFZ88_RS23010 PF08019 Phosphoethanolamine transferase EptA/EptB LFZ88_RS23010 PF00884 Sulfatase LFZ88_RS23015 PF13520 Amino acid permease LFZ88_RS23020 PF12833 Helix-turn-helix domain LFZ88_RS23025 PF01276 Orn/Lys/Arg decarboxylase, major domain LFZ88_RS23025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LFZ88_RS23025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFZ88_RS23030 PF12833 Helix-turn-helix domain LFZ88_RS23035 PF11975 Family 4 glycosyl hydrolase C-terminal domain LFZ88_RS23035 PF02056 Family 4 glycosyl hydrolase LFZ88_RS23045 PF05681 Fumarate hydratase (Fumerase) LFZ88_RS23045 PF05683 Fumarase C-terminus LFZ88_RS23050 PF03605 Anaerobic c4-dicarboxylate membrane transporter LFZ88_RS23060 PF00072 Response regulator receiver domain LFZ88_RS23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS23065 PF00989 PAS fold LFZ88_RS23065 PF17203 Single cache domain 3 LFZ88_RS23065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LFZ88_RS23070 PF01568 Molydopterin dinucleotide binding domain LFZ88_RS23070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFZ88_RS23070 PF00384 Molybdopterin oxidoreductase LFZ88_RS23075 PF13247 4Fe-4S dicluster domain LFZ88_RS23075 PF12800 4Fe-4S binding domain LFZ88_RS23080 PF04976 DMSO reductase anchor subunit (DmsC) LFZ88_RS23085 PF02613 Nitrate reductase delta subunit LFZ88_RS23095 PF06977 SdiA-regulated LFZ88_RS23105 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS23105 PF00072 Response regulator receiver domain LFZ88_RS23110 PF12833 Helix-turn-helix domain LFZ88_RS23120 PF01527 Transposase LFZ88_RS23145 PF01569 PAP2 superfamily LFZ88_RS23165 PF02683 Cytochrome C biogenesis protein transmembrane region LFZ88_RS23165 PF11412 Disulphide bond corrector protein DsbC LFZ88_RS23170 PF03091 CutA1 divalent ion tolerance protein LFZ88_RS23175 PF03605 Anaerobic c4-dicarboxylate membrane transporter LFZ88_RS23180 PF10415 Fumarase C C-terminus LFZ88_RS23180 PF00206 Lyase LFZ88_RS23185 PF04186 FxsA cytoplasmic membrane protein LFZ88_RS23190 PF13520 Amino acid permease LFZ88_RS23195 PF00166 Chaperonin 10 Kd subunit LFZ88_RS23200 PF00118 TCP-1/cpn60 chaperonin family LFZ88_RS23205 PF13698 Domain of unknown function (DUF4156) LFZ88_RS23210 PF15922 YjeJ-like LFZ88_RS23215 PF04055 Radical SAM superfamily LFZ88_RS23220 PF01132 Elongation factor P (EF-P) OB domain LFZ88_RS23220 PF08207 Elongation factor P (EF-P) KOW-like domain LFZ88_RS23220 PF09285 Elongation factor P, C-terminal LFZ88_RS23225 PF08085 Entericidin EcnA/B family LFZ88_RS23230 PF08085 Entericidin EcnA/B family LFZ88_RS23235 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS23240 PF00893 Small Multidrug Resistance protein LFZ88_RS23245 PF08212 Lipocalin-like domain LFZ88_RS23250 PF02313 Fumarate reductase subunit D LFZ88_RS23255 PF02300 Fumarate reductase subunit C LFZ88_RS23260 PF13183 4Fe-4S dicluster domain LFZ88_RS23260 PF13085 2Fe-2S iron-sulfur cluster binding domain LFZ88_RS23265 PF00890 FAD binding domain LFZ88_RS23265 PF02910 Fumarate reductase flavoprotein C-term LFZ88_RS23270 PF00152 tRNA synthetases class II (D, K and N) LFZ88_RS23275 PF13520 Amino acid permease LFZ88_RS23280 PF10840 Protein of unknown function (DUF2645) LFZ88_RS23285 PF00924 Mechanosensitive ion channel LFZ88_RS23285 PF12795 Mechanosensitive ion channel porin domain LFZ88_RS23285 PF12794 Mechanosensitive ion channel inner membrane domain 1 LFZ88_RS23290 PF02666 Phosphatidylserine decarboxylase LFZ88_RS23295 PF03193 RsgA GTPase LFZ88_RS23300 PF00929 Exonuclease LFZ88_RS23305 PF00497 Bacterial extracellular solute-binding proteins, family 3 LFZ88_RS23325 PF08331 Domain of unknown function (DUF1730) LFZ88_RS23330 PF01256 Carbohydrate kinase LFZ88_RS23330 PF03853 YjeF-related protein N-terminus LFZ88_RS23335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LFZ88_RS23340 PF01520 N-acetylmuramoyl-L-alanine amidase LFZ88_RS23345 PF01119 DNA mismatch repair protein, C-terminal domain LFZ88_RS23345 PF08676 MutL C terminal dimerisation domain LFZ88_RS23355 PF17209 Hfq protein LFZ88_RS23360 PF16360 GTP-binding GTPase Middle Region LFZ88_RS23360 PF13167 GTP-binding GTPase N-terminal LFZ88_RS23360 PF01926 50S ribosome-binding GTPase LFZ88_RS23365 PF01145 SPFH domain / Band 7 family LFZ88_RS23365 PF12221 Bacterial membrane protein N terminal LFZ88_RS23370 PF01145 SPFH domain / Band 7 family LFZ88_RS23375 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LFZ88_RS23380 PF00709 Adenylosuccinate synthetase LFZ88_RS23385 PF02082 Transcriptional regulator LFZ88_RS23390 PF08461 Ribonuclease R winged-helix domain LFZ88_RS23390 PF00773 RNB domain LFZ88_RS23390 PF08206 Ribonuclease B OB domain LFZ88_RS23390 PF17876 Cold shock domain LFZ88_RS23390 PF00575 S1 RNA binding domain LFZ88_RS23395 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFZ88_RS23395 PF00588 SpoU rRNA Methylase family LFZ88_RS23400 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) LFZ88_RS23405 PF04012 PspA/IM30 family LFZ88_RS23415 PF10679 Protein of unknown function (DUF2491) LFZ88_RS23420 PF03994 Domain of Unknown Function (DUF350) LFZ88_RS23425 PF06693 Protein of unknown function (DUF1190) LFZ88_RS23430 PF03738 Glutathionylspermidine synthase preATP-grasp LFZ88_RS23435 PF02770 Acyl-CoA dehydrogenase, middle domain LFZ88_RS23435 PF18158 Adaptive response protein AidB N-terminal domain LFZ88_RS23435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LFZ88_RS23440 PF07338 Protein of unknown function (DUF1471) LFZ88_RS23445 PF07338 Protein of unknown function (DUF1471) LFZ88_RS23450 PF00326 Prolyl oligopeptidase family LFZ88_RS23455 PF00455 DeoR C terminal sensor domain LFZ88_RS23455 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS23465 PF03611 PTS system sugar-specific permease component LFZ88_RS23470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LFZ88_RS23475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS23480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFZ88_RS23485 PF01261 Xylose isomerase-like TIM barrel LFZ88_RS23490 PF00596 Class II Aldolase and Adducin N-terminal domain LFZ88_RS23495 PF07338 Protein of unknown function (DUF1471) LFZ88_RS23510 PF01250 Ribosomal protein S6 LFZ88_RS23515 PF00436 Single-strand binding protein family LFZ88_RS23520 PF01084 Ribosomal protein S18 LFZ88_RS23525 PF01281 Ribosomal protein L9, N-terminal domain LFZ88_RS23525 PF03948 Ribosomal protein L9, C-terminal domain LFZ88_RS23535 PF04225 Opacity-associated protein A LysM-like domain LFZ88_RS23535 PF08525 Opacity-associated protein A N-terminal motif LFZ88_RS23540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFZ88_RS23540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LFZ88_RS23545 PF00324 Amino acid permease LFZ88_RS23560 PF04405 Domain of Unknown function (DUF542) LFZ88_RS23560 PF01814 Hemerythrin HHE cation binding domain LFZ88_RS23565 PF00892 EamA-like transporter family LFZ88_RS23570 PF05368 NmrA-like family LFZ88_RS23575 PF01638 HxlR-like helix-turn-helix LFZ88_RS23580 PF00149 Calcineurin-like phosphoesterase LFZ88_RS23580 PF02872 5'-nucleotidase, C-terminal domain LFZ88_RS23590 PF00459 Inositol monophosphatase family LFZ88_RS23595 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LFZ88_RS23605 PF06526 Protein of unknown function (DUF1107) LFZ88_RS23610 PF01595 Cyclin M transmembrane N-terminal domain LFZ88_RS23610 PF03471 Transporter associated domain LFZ88_RS23610 PF00571 CBS domain LFZ88_RS23615 PF01625 Peptide methionine sulfoxide reductase LFZ88_RS23620 PF01103 Surface antigen LFZ88_RS23620 PF07244 Surface antigen variable number repeat LFZ88_RS23620 PF17243 POTRA domain TamA domain 1 LFZ88_RS23625 PF04357 TamB, inner membrane protein subunit of TAM complex LFZ88_RS23630 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LFZ88_RS23635 PF07690 Major Facilitator Superfamily LFZ88_RS23640 PF01979 Amidohydrolase family LFZ88_RS23645 PF00719 Inorganic pyrophosphatase LFZ88_RS23650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LFZ88_RS23655 PF01225 Mur ligase family, catalytic domain LFZ88_RS23655 PF02875 Mur ligase family, glutamate ligase domain LFZ88_RS23655 PF08245 Mur ligase middle domain LFZ88_RS23660 PF04751 Protein of unknown function (DUF615) LFZ88_RS23665 PF01523 Putative modulator of DNA gyrase LFZ88_RS23670 PF07361 Cytochrome b562 LFZ88_RS23700 PF01979 Amidohydrolase family LFZ88_RS23705 PF03841 L-seryl-tRNA selenium transferase LFZ88_RS23710 PF07071 KDGP aldolase LFZ88_RS23715 PF00874 PRD domain LFZ88_RS23715 PF08279 HTH domain LFZ88_RS23715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LFZ88_RS23715 PF05043 Mga helix-turn-helix domain LFZ88_RS23720 PF04221 RelB antitoxin LFZ88_RS23725 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LFZ88_RS23735 PF13597 Anaerobic ribonucleoside-triphosphate reductase LFZ88_RS23735 PF03477 ATP cone domain LFZ88_RS23740 PF11941 Domain of unknown function (DUF3459) LFZ88_RS23740 PF00128 Alpha amylase, catalytic domain LFZ88_RS23745 PF02378 Phosphotransferase system, EIIC LFZ88_RS23745 PF00367 phosphotransferase system, EIIB LFZ88_RS23750 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS23755 PF00690 Cation transporter/ATPase, N-terminus LFZ88_RS23755 PF00689 Cation transporting ATPase, C-terminus LFZ88_RS23760 PF01042 Endoribonuclease L-PSP LFZ88_RS23765 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LFZ88_RS23765 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LFZ88_RS23770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ88_RS23770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ88_RS23775 PF08052 PyrBI operon leader peptide LFZ88_RS23780 PF02863 Arginine repressor, C-terminal domain LFZ88_RS23780 PF01316 Arginine repressor, DNA binding domain LFZ88_RS23785 PF03606 C4-dicarboxylate anaerobic carrier LFZ88_RS23790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ88_RS23790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ88_RS23795 PF00696 Amino acid kinase family LFZ88_RS23815 PF04074 YhcH/YjgK/YiaL LFZ88_RS23820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFZ88_RS23820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFZ88_RS23825 PF06877 Regulator of ribonuclease activity B LFZ88_RS23830 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LFZ88_RS23835 PF12276 Protein of unknown function (DUF3617) LFZ88_RS23840 PF00583 Acetyltransferase (GNAT) family LFZ88_RS23845 PF05987 Bacterial protein of unknown function (DUF898) LFZ88_RS23850 PF08264 Anticodon-binding domain of tRNA LFZ88_RS23850 PF00133 tRNA synthetases class I (I, L, M and V) LFZ88_RS23850 PF10458 Valyl tRNA synthetase tRNA binding arm LFZ88_RS23855 PF04364 DNA polymerase III chi subunit, HolC LFZ88_RS23860 PF02789 Cytosol aminopeptidase family, N-terminal domain LFZ88_RS23860 PF00883 Cytosol aminopeptidase family, catalytic domain LFZ88_RS23870 PF03739 Lipopolysaccharide export system permease LptF/LptG LFZ88_RS23875 PF03739 Lipopolysaccharide export system permease LptF/LptG LFZ88_RS23880 PF00356 Bacterial regulatory proteins, lacI family LFZ88_RS23885 PF02447 GntP family permease LFZ88_RS23890 PF00106 short chain dehydrogenase LFZ88_RS23895 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS23895 PF00107 Zinc-binding dehydrogenase LFZ88_RS23900 PF01202 Shikimate kinase LFZ88_RS23905 PF08240 Alcohol dehydrogenase GroES-like domain LFZ88_RS23905 PF00107 Zinc-binding dehydrogenase LFZ88_RS23915 PF13356 Arm DNA-binding domain LFZ88_RS23915 PF00589 Phage integrase family LFZ88_RS23920 PF01420 Type I restriction modification DNA specificity domain LFZ88_RS23925 PF02384 N-6 DNA Methylase LFZ88_RS23930 PF12008 Type I restriction and modification enzyme - subunit R C terminal LFZ88_RS23930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFZ88_RS23930 PF18766 SWI2/SNF2 ATPase LFZ88_RS23945 PF13676 TIR domain LFZ88_RS23980 PF01926 50S ribosome-binding GTPase LFZ88_RS23990 PF13280 WYL domain LFZ88_RS23990 PF08220 DeoR-like helix-turn-helix domain LFZ88_RS24015 PF06067 Domain of unknown function (DUF932) LFZ88_RS24020 PF03230 Antirestriction protein LFZ88_RS24025 PF04002 RadC-like JAB domain LFZ88_RS24030 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LFZ88_RS24035 PF06755 CbtA_toxin of type IV toxin-antitoxin system LFZ88_RS24060 PF01709 Transcriptional regulator LFZ88_RS24070 PF13847 Methyltransferase domain LFZ88_RS24075 PF09857 Putative toxin of bacterial toxin-antitoxin pair LFZ88_RS24095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LFZ88_RS24095 PF03625 Domain of unknown function DUF302 LFZ88_RS24100 PF01738 Dienelactone hydrolase family LFZ88_RS24110 PF00392 Bacterial regulatory proteins, gntR family LFZ88_RS24110 PF07729 FCD domain LFZ88_RS24115 PF00579 tRNA synthetases class I (W and Y) LFZ88_RS24130 PF01177 Asp/Glu/Hydantoin racemase LFZ88_RS24135 PF03466 LysR substrate binding domain LFZ88_RS24135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFZ88_RS24140 PF01979 Amidohydrolase family LFZ88_RS24145 PF07670 Nucleoside recognition LFZ88_RS24150 PF07670 Nucleoside recognition LFZ88_RS24160 PF06779 Uncharacterised MFS-type transporter YbfB LFZ88_RS24165 PF04286 Protein of unknown function (DUF445) LFZ88_RS24170 PF07690 Major Facilitator Superfamily LFZ88_RS24175 PF04754 Putative transposase, YhgA-like LFZ88_RS24180 PF00171 Aldehyde dehydrogenase family LFZ88_RS24195 PF11867 Domain of unknown function (DUF3387) LFZ88_RS24195 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFZ88_RS24195 PF18766 SWI2/SNF2 ATPase LFZ88_RS24200 PF01420 Type I restriction modification DNA specificity domain LFZ88_RS24210 PF00665 Integrase core domain LFZ88_RS24210 PF13276 HTH-like domain LFZ88_RS24210 PF13333 Integrase core domain LFZ88_RS24215 PF02384 N-6 DNA Methylase LFZ88_RS24225 PF02384 N-6 DNA Methylase LFZ88_RS24225 PF12161 HsdM N-terminal domain LFZ88_RS24255 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFZ88_RS24255 PF07683 Cobalamin synthesis protein cobW C-terminal domain LFZ88_RS24260 PF04328 Selenoprotein, putative LFZ88_RS24265 PF13722 5TM C-terminal transporter carbon starvation CstA LFZ88_RS24265 PF02554 Carbon starvation protein CstA LFZ88_RS24270 PF02203 Tar ligand binding domain homologue LFZ88_RS24270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFZ88_RS24270 PF00672 HAMP domain LFZ88_RS24275 PF00158 Sigma-54 interaction domain LFZ88_RS24275 PF00874 PRD domain LFZ88_RS24285 PF03830 PTS system sorbose subfamily IIB component LFZ88_RS24290 PF03609 PTS system sorbose-specific iic component LFZ88_RS24295 PF03613 PTS system mannose/fructose/sorbose family IID component LFZ88_RS24300 PF01380 SIS domain LFZ88_RS24305 PF01380 SIS domain LFZ88_RS24310 PF00884 Sulfatase LFZ88_RS24315 PF10696 Protein of unknown function (DUF2501) LFZ88_RS24320 PF01695 IstB-like ATP binding protein LFZ88_RS24325 PF17948 DnaT DNA-binding domain LFZ88_RS24330 PF12821 Threonine/Serine exporter, ThrE LFZ88_RS24335 PF06738 Putative threonine/serine exporter LFZ88_RS24340 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS24345 PF00196 Bacterial regulatory proteins, luxR family LFZ88_RS24350 PF04073 Aminoacyl-tRNA editing domain LFZ88_RS24355 PF11575 FhuF 2Fe-2S C-terminal domain LFZ88_RS24355 PF06276 Ferric iron reductase FhuF-like transporter LFZ88_RS24360 PF05230 MASE2 domain LFZ88_RS24360 PF00990 Diguanylate cyclase, GGDEF domain LFZ88_RS24365 PF07256 Protein of unknown function (DUF1435) LFZ88_RS24385 PF05175 Methyltransferase small domain LFZ88_RS24385 PF08468 Methyltransferase small domain N-terminal LFZ88_RS24390 PF03603 DNA polymerase III psi subunit LFZ88_RS24395 PF00583 Acetyltransferase (GNAT) family LFZ88_RS24400 PF13419 Haloacid dehalogenase-like hydrolase LFZ88_RS24405 PF03144 Elongation factor Tu domain 2 LFZ88_RS24405 PF16658 Class II release factor RF3, C-terminal domain LFZ88_RS24405 PF00009 Elongation factor Tu GTP binding domain LFZ88_RS24410 PF04972 BON domain LFZ88_RS24415 PF07043 Protein of unknown function (DUF1328) LFZ88_RS24420 PF01734 Patatin-like phospholipase LFZ88_RS24425 PF01026 TatD related DNase LFZ88_RS24430 PF04055 Radical SAM superfamily LFZ88_RS24435 PF11230 Protein of unknown function (DUF3029) LFZ88_RS24440 PF01791 DeoC/LacD family aldolase LFZ88_RS24445 PF02885 Glycosyl transferase family, helical bundle domain LFZ88_RS24445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LFZ88_RS24445 PF00591 Glycosyl transferase family, a/b domain LFZ88_RS24450 PF01676 Metalloenzyme superfamily LFZ88_RS24455 PF01048 Phosphorylase superfamily LFZ88_RS24465 PF00577 Outer membrane usher protein LFZ88_RS24465 PF13954 PapC N-terminal domain LFZ88_RS24465 PF13953 PapC C-terminal domain LFZ88_RS24470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS24475 PF06551 Protein of unknown function (DUF1120) LFZ88_RS24485 PF10437 Bacterial lipoate protein ligase C-terminus LFZ88_RS24485 PF03099 Biotin/lipoate A/B protein ligase family LFZ88_RS24490 PF10144 Bacterial virulence factor haemolysin LFZ88_RS24500 PF18429 Domain of unknown function (DUF5609) LFZ88_RS24505 PF18073 Rubredoxin metal binding domain LFZ88_RS24510 PF01381 Helix-turn-helix LFZ88_RS24510 PF13521 AAA domain LFZ88_RS24515 PF00005 ABC transporter LFZ88_RS24515 PF12848 ABC transporter LFZ88_RS24525 PF14718 Soluble lytic murein transglycosylase L domain LFZ88_RS24525 PF01464 Transglycosylase SLT domain LFZ88_RS24530 PF01371 Trp repressor protein LFZ88_RS24535 PF01931 Protein of unknown function DUF84 LFZ88_RS24540 PF00300 Histidine phosphatase superfamily (branch 1) LFZ88_RS24545 PF06445 GyrI-like small molecule binding domain LFZ88_RS24545 PF12833 Helix-turn-helix domain LFZ88_RS24550 PF05981 CreA protein LFZ88_RS24555 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS24555 PF00072 Response regulator receiver domain LFZ88_RS24560 PF00672 HAMP domain LFZ88_RS24560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFZ88_RS24560 PF00512 His Kinase A (phospho-acceptor) domain LFZ88_RS24565 PF06123 Inner membrane protein CreD LFZ88_RS24580 PF13954 PapC N-terminal domain LFZ88_RS24580 PF00577 Outer membrane usher protein LFZ88_RS24580 PF13953 PapC C-terminal domain LFZ88_RS24585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LFZ88_RS24585 PF02753 Pili assembly chaperone PapD, C-terminal domain LFZ88_RS24595 PF15977 Winged helix-turn-helix DNA binding LFZ88_RS24605 PF00072 Response regulator receiver domain LFZ88_RS24605 PF00486 Transcriptional regulatory protein, C terminal LFZ88_RS24615 PF00588 SpoU rRNA Methylase family