locus-tag class description E3399_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix E3399_RS00005 PF11638 DnaA N-terminal domain E3399_RS00005 PF00308 Bacterial dnaA protein E3399_RS00010 PF02767 DNA polymerase III beta subunit, central domain E3399_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E3399_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E3399_RS00015 PF02463 RecF/RecN/SMC N terminal domain E3399_RS00020 PF01751 Toprim domain E3399_RS00020 PF00204 DNA gyrase B E3399_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus E3399_RS00020 PF18053 DNA gyrase B subunit insert domain E3399_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS00025 PF03466 LysR substrate binding domain E3399_RS00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS00030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS00030 PF13378 Enolase C-terminal domain-like E3399_RS00035 PF07690 Major Facilitator Superfamily E3399_RS00045 PF07729 FCD domain E3399_RS00045 PF00392 Bacterial regulatory proteins, gntR family E3399_RS00050 PF05035 2-keto-3-deoxy-galactonokinase E3399_RS00055 PF01081 KDPG and KHG aldolase E3399_RS00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS00060 PF13378 Enolase C-terminal domain-like E3399_RS00065 PF07690 Major Facilitator Superfamily E3399_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS00070 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS00070 PF01627 Hpt domain E3399_RS00070 PF00072 Response regulator receiver domain E3399_RS00070 PF00672 HAMP domain E3399_RS00075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3399_RS00080 PF00486 Transcriptional regulatory protein, C terminal E3399_RS00080 PF00072 Response regulator receiver domain E3399_RS00085 PF03264 NapC/NirT cytochrome c family, N-terminal region E3399_RS00090 PF18364 Molybdopterin oxidoreductase N-terminal domain E3399_RS00090 PF00384 Molybdopterin oxidoreductase E3399_RS00090 PF01568 Molydopterin dinucleotide binding domain E3399_RS00095 PF02613 Nitrate reductase delta subunit E3399_RS00100 PF03150 Di-haem cytochrome c peroxidase E3399_RS00100 PF00034 Cytochrome c E3399_RS00100 PF14376 Haem-binding domain E3399_RS00105 PF00005 ABC transporter E3399_RS00110 PF03379 CcmB protein E3399_RS00115 PF01578 Cytochrome C assembly protein E3399_RS00120 PF04995 Heme exporter protein D (CcmD) E3399_RS00125 PF03100 CcmE E3399_RS00130 PF01578 Cytochrome C assembly protein E3399_RS00130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E3399_RS00135 PF08534 Redoxin E3399_RS00140 PF03918 Cytochrome C biogenesis protein E3399_RS00145 PF12566 Protein of unknown function (DUF3748) E3399_RS00145 PF07676 WD40-like Beta Propeller Repeat E3399_RS00150 PF07119 Protein of unknown function (DUF1375) E3399_RS00155 PF00011 Hsp20/alpha crystallin family E3399_RS00160 PF00011 Hsp20/alpha crystallin family E3399_RS00165 PF02080 TrkA-C domain E3399_RS00165 PF06826 Predicted Permease Membrane Region E3399_RS00175 PF02656 Domain of unknown function (DUF202) E3399_RS00180 PF02656 Domain of unknown function (DUF202) E3399_RS00190 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS00195 PF02447 GntP family permease E3399_RS00200 PF03466 LysR substrate binding domain E3399_RS00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS00210 PF07690 Major Facilitator Superfamily E3399_RS00220 PF13939 Toxin TisB, type I toxin-antitoxin system E3399_RS00230 PF08049 IlvB leader peptide E3399_RS00235 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS00235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS00235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS00240 PF01842 ACT domain E3399_RS00245 PF08220 DeoR-like helix-turn-helix domain E3399_RS00245 PF00455 DeoR C terminal sensor domain E3399_RS00250 PF00294 pfkB family carbohydrate kinase E3399_RS00255 PF07690 Major Facilitator Superfamily E3399_RS00265 PF00196 Bacterial regulatory proteins, luxR family E3399_RS00265 PF00072 Response regulator receiver domain E3399_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS00270 PF07730 Histidine kinase E3399_RS00270 PF05231 MASE1 E3399_RS00275 PF07690 Major Facilitator Superfamily E3399_RS00280 PF07690 Major Facilitator Superfamily E3399_RS00285 PF06711 Protein of unknown function (DUF1198) E3399_RS00290 PF00392 Bacterial regulatory proteins, gntR family E3399_RS00290 PF07702 UTRA domain E3399_RS00295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS00295 PF08279 HTH domain E3399_RS00295 PF05043 Mga helix-turn-helix domain E3399_RS00295 PF00874 PRD domain E3399_RS00300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS00305 PF03611 PTS system sugar-specific permease component E3399_RS00315 PF01116 Fructose-bisphosphate aldolase class-II E3399_RS00335 PF07690 Major Facilitator Superfamily E3399_RS00340 PF00232 Glycosyl hydrolase family 1 E3399_RS00350 PF00874 PRD domain E3399_RS00350 PF00158 Sigma-54 interaction domain E3399_RS00360 PF03610 PTS system fructose IIA component E3399_RS00360 PF03830 PTS system sorbose subfamily IIB component E3399_RS00365 PF03609 PTS system sorbose-specific iic component E3399_RS00370 PF03613 PTS system mannose/fructose/sorbose family IID component E3399_RS00375 PF03841 L-seryl-tRNA selenium transferase E3399_RS00380 PF07071 KDGP aldolase E3399_RS00385 PF04754 Putative transposase, YhgA-like E3399_RS00390 PF00892 EamA-like transporter family E3399_RS00395 PF02308 MgtC family E3399_RS00400 PF00690 Cation transporter/ATPase, N-terminus E3399_RS00400 PF00689 Cation transporting ATPase, C-terminus E3399_RS00415 PF00857 Isochorismatase family E3399_RS00425 PF00486 Transcriptional regulatory protein, C terminal E3399_RS00435 PF03797 Autotransporter beta-domain E3399_RS00440 PF00196 Bacterial regulatory proteins, luxR family E3399_RS00465 PF13802 Galactose mutarotase-like E3399_RS00465 PF01055 Glycosyl hydrolases family 31 E3399_RS00470 PF05170 AsmA family E3399_RS00475 PF00860 Permease family E3399_RS00480 PF03616 Sodium/glutamate symporter E3399_RS00485 PF00270 DEAD/DEAH box helicase E3399_RS00485 PF00271 Helicase conserved C-terminal domain E3399_RS00485 PF17191 RecG wedge domain E3399_RS00490 PF00588 SpoU rRNA Methylase family E3399_RS00490 PF12105 SpoU, rRNA methylase, C-terminal E3399_RS00495 PF13291 ACT domain E3399_RS00495 PF02824 TGS domain E3399_RS00495 PF04607 Region found in RelA / SpoT proteins E3399_RS00500 PF01192 RNA polymerase Rpb6 E3399_RS00505 PF00625 Guanylate kinase E3399_RS00510 PF03120 NAD-dependent DNA ligase OB-fold domain E3399_RS00510 PF01653 NAD-dependent DNA ligase adenylation domain E3399_RS00515 PF03458 UPF0126 domain E3399_RS00525 PF03466 LysR substrate binding domain E3399_RS00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS00530 PF08340 Domain of unknown function (DUF1732) E3399_RS00530 PF03755 YicC-like family, N-terminal region E3399_RS00535 PF01138 3' exoribonuclease family, domain 1 E3399_RS00535 PF03725 3' exoribonuclease family, domain 2 E3399_RS00540 PF00156 Phosphoribosyl transferase domain E3399_RS00545 PF00440 Bacterial regulatory proteins, tetR family E3399_RS00550 PF00692 dUTPase E3399_RS00555 PF04127 DNA / pantothenate metabolism flavoprotein E3399_RS00555 PF02441 Flavoprotein E3399_RS00560 PF04002 RadC-like JAB domain E3399_RS00565 PF00830 Ribosomal L28 family E3399_RS00570 PF00471 Ribosomal protein L33 E3399_RS00575 PF06827 Zinc finger found in FPG and IleRS E3399_RS00575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E3399_RS00575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E3399_RS00580 PF01467 Cytidylyltransferase-like E3399_RS00585 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E3399_RS00590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3399_RS00595 PF13439 Glycosyltransferase Family 4 E3399_RS00595 PF00534 Glycosyl transferases group 1 E3399_RS00615 PF00534 Glycosyl transferases group 1 E3399_RS00615 PF13439 Glycosyltransferase Family 4 E3399_RS00620 PF08437 Glycosyl transferase family 8 C-terminal E3399_RS00620 PF01501 Glycosyl transferase family 8 E3399_RS00625 PF01501 Glycosyl transferase family 8 E3399_RS00625 PF08437 Glycosyl transferase family 8 C-terminal E3399_RS00630 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) E3399_RS00640 PF00534 Glycosyl transferases group 1 E3399_RS00645 PF04932 O-Antigen ligase E3399_RS00650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3399_RS00655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E3399_RS00660 PF01370 NAD dependent epimerase/dehydratase family E3399_RS00665 PF00155 Aminotransferase class I and II E3399_RS00670 PF00107 Zinc-binding dehydrogenase E3399_RS00670 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS00680 PF00535 Glycosyl transferase family 2 E3399_RS00685 PF04748 Divergent polysaccharide deacetylase E3399_RS00690 PF01551 Peptidase family M23 E3399_RS00695 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E3399_RS00695 PF01676 Metalloenzyme superfamily E3399_RS00700 PF00581 Rhodanese-like domain E3399_RS00705 PF00462 Glutaredoxin E3399_RS00710 PF02556 Preprotein translocase subunit SecB E3399_RS00715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E3399_RS00715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E3399_RS00720 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS00720 PF06426 Serine acetyltransferase, N-terminal E3399_RS00725 PF07690 Major Facilitator Superfamily E3399_RS00730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS00730 PF13378 Enolase C-terminal domain-like E3399_RS00735 PF00356 Bacterial regulatory proteins, lacI family E3399_RS00740 PF00588 SpoU rRNA Methylase family E3399_RS00745 PF01070 FMN-dependent dehydrogenase E3399_RS00750 PF07729 FCD domain E3399_RS00750 PF00392 Bacterial regulatory proteins, gntR family E3399_RS00755 PF02652 L-lactate permease E3399_RS00760 PF03895 YadA-like membrane anchor domain E3399_RS00760 PF05658 Head domain of trimeric autotransporter adhesin E3399_RS00760 PF05662 Coiled stalk of trimeric autotransporter adhesin E3399_RS00760 PF13018 Extended Signal Peptide of Type V secretion system E3399_RS00765 PF11622 Protein of unknown function (DUF3251) E3399_RS00770 PF10928 Protein of unknown function (DUF2810) E3399_RS00780 PF05068 Mannitol repressor E3399_RS00785 PF01232 Mannitol dehydrogenase Rossmann domain E3399_RS00785 PF08125 Mannitol dehydrogenase C-terminal domain E3399_RS00790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS00790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS00790 PF02378 Phosphotransferase system, EIIC E3399_RS00800 PF11742 Protein of unknown function (DUF3302) E3399_RS00805 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS00805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS00810 PF00043 Glutathione S-transferase, C-terminal domain E3399_RS00810 PF13417 Glutathione S-transferase, N-terminal domain E3399_RS00815 PF12390 Selenocysteine synthase N terminal E3399_RS00815 PF03841 L-seryl-tRNA selenium transferase E3399_RS00820 PF09107 Elongation factor SelB, winged helix E3399_RS00820 PF09106 Elongation factor SelB, winged helix E3399_RS00820 PF03144 Elongation factor Tu domain 2 E3399_RS00820 PF00009 Elongation factor Tu GTP binding domain E3399_RS00825 PF00480 ROK family E3399_RS00830 PF00171 Aldehyde dehydrogenase family E3399_RS00835 PF07944 Beta-L-arabinofuranosidase, GH127 E3399_RS00845 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS00850 PF01261 Xylose isomerase-like TIM barrel E3399_RS00855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3399_RS00860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS00860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS00865 PF03480 Bacterial extracellular solute-binding protein, family 7 E3399_RS00870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E3399_RS00875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E3399_RS00880 PF16154 Domain of unknown function (DUF4862) E3399_RS00885 PF04074 YhcH/YjgK/YiaL E3399_RS00890 PF02615 Malate/L-lactate dehydrogenase E3399_RS00895 PF09339 IclR helix-turn-helix domain E3399_RS00895 PF01614 Bacterial transcriptional regulator E3399_RS00900 PF13247 4Fe-4S dicluster domain E3399_RS00905 PF00155 Aminotransferase class I and II E3399_RS00910 PF00128 Alpha amylase, catalytic domain E3399_RS00915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3399_RS00920 PF12833 Helix-turn-helix domain E3399_RS00930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS00930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS00935 PF05360 yiaA/B two helix domain E3399_RS00940 PF01757 Acyltransferase family E3399_RS00950 PF13983 YsaB-like lipoprotein E3399_RS00955 PF02091 Glycyl-tRNA synthetase alpha subunit E3399_RS00960 PF05746 DALR anticodon binding domain E3399_RS00960 PF02092 Glycyl-tRNA synthetase beta subunit E3399_RS00965 PF13333 Integrase core domain E3399_RS00965 PF13276 HTH-like domain E3399_RS00965 PF00665 Integrase core domain E3399_RS00990 PF00313 'Cold-shock' DNA-binding domain E3399_RS00995 PF01381 Helix-turn-helix E3399_RS01000 PF11254 Protein of unknown function (DUF3053) E3399_RS01005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3399_RS01005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3399_RS01010 PF13488 Glycine zipper E3399_RS01010 PF00691 OmpA family E3399_RS01015 PF01568 Molydopterin dinucleotide binding domain E3399_RS01015 PF18364 Molybdopterin oxidoreductase N-terminal domain E3399_RS01015 PF00384 Molybdopterin oxidoreductase E3399_RS01020 PF00583 Acetyltransferase (GNAT) family E3399_RS01025 PF03352 Methyladenine glycosylase E3399_RS01030 PF03797 Autotransporter beta-domain E3399_RS01035 PF00419 Fimbrial protein E3399_RS01040 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS01040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS01045 PF13954 PapC N-terminal domain E3399_RS01045 PF13953 PapC C-terminal domain E3399_RS01045 PF00577 Outer membrane usher protein E3399_RS01050 PF00419 Fimbrial protein E3399_RS01055 PF00419 Fimbrial protein E3399_RS01060 PF00884 Sulfatase E3399_RS01060 PF08019 Phosphoethanolamine transferase EptA/EptB E3399_RS01075 PF00356 Bacterial regulatory proteins, lacI family E3399_RS01085 PF00860 Permease family E3399_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS01100 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS01100 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS01105 PF00005 ABC transporter E3399_RS01105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS01110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS01110 PF00005 ABC transporter E3399_RS01115 PF03222 Tryptophan/tyrosine permease family E3399_RS01125 PF13940 Toxin Ldr, type I toxin-antitoxin system E3399_RS01130 PF11658 Cellulose biosynthesis protein BcsG E3399_RS01135 PF11120 Cellulose biosynthesis protein BcsF E3399_RS01140 PF10995 Cellulose biosynthesis GIL E3399_RS01145 PF10945 Cellulose biosynthesis protein BcsR E3399_RS01150 PF06564 Cellulose biosynthesis protein BcsQ E3399_RS01155 PF07238 PilZ domain E3399_RS01155 PF00535 Glycosyl transferase family 2 E3399_RS01160 PF03170 Bacterial cellulose synthase subunit E3399_RS01165 PF01270 Glycosyl hydrolases family 8 E3399_RS01170 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) E3399_RS01170 PF13176 Tetratricopeptide repeat E3399_RS01175 PF00563 EAL domain E3399_RS01175 PF17154 Gammaproteobacterial periplasmic sensor domain E3399_RS01175 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS01175 PF00672 HAMP domain E3399_RS01180 PF00375 Sodium:dicarboxylate symporter family E3399_RS01185 PF00675 Insulinase (Peptidase family M16) E3399_RS01185 PF05193 Peptidase M16 inactive domain E3399_RS01190 PF00294 pfkB family carbohydrate kinase E3399_RS01195 PF00563 EAL domain E3399_RS01200 PF05170 AsmA family E3399_RS01205 PF00083 Sugar (and other) transporter E3399_RS01205 PF07690 Major Facilitator Superfamily E3399_RS01210 PF03631 Virulence factor BrkB E3399_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS01215 PF03466 LysR substrate binding domain E3399_RS01220 PF00196 Bacterial regulatory proteins, luxR family E3399_RS01235 PF01204 Trehalase E3399_RS01240 PF00392 Bacterial regulatory proteins, gntR family E3399_RS01240 PF07702 UTRA domain E3399_RS01245 PF01380 SIS domain E3399_RS01250 PF00294 pfkB family carbohydrate kinase E3399_RS01255 PF03605 Anaerobic c4-dicarboxylate membrane transporter E3399_RS01260 PF00710 Asparaginase, N-terminal E3399_RS01260 PF17763 Glutaminase/Asparaginase C-terminal domain E3399_RS01265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3399_RS01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS01270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E3399_RS01275 PF01569 PAP2 superfamily E3399_RS01280 PF01432 Peptidase family M3 E3399_RS01285 PF04445 Putative SAM-dependent methyltransferase E3399_RS01290 PF00854 POT family E3399_RS01295 PF00582 Universal stress protein family E3399_RS01300 PF10625 Universal stress protein B (UspB) E3399_RS01305 PF01384 Phosphate transporter family E3399_RS01315 PF13533 Biotin-lipoyl like E3399_RS01320 PF00005 ABC transporter E3399_RS01330 PF01402 Ribbon-helix-helix protein, copG family E3399_RS01330 PF08753 NikR C terminal nickel binding domain E3399_RS01335 PF01648 4'-phosphopantetheinyl transferase superfamily E3399_RS01340 PF01594 AI-2E family transporter E3399_RS01345 PF07690 Major Facilitator Superfamily E3399_RS01350 PF08786 DcrB E3399_RS01355 PF02592 Putative vitamin uptake transporter E3399_RS01360 PF01206 Sulfurtransferase TusA E3399_RS01365 PF02203 Tar ligand binding domain homologue E3399_RS01365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS01365 PF00672 HAMP domain E3399_RS01370 PF00403 Heavy-metal-associated domain E3399_RS01375 PF07947 YhhN family E3399_RS01380 PF10694 Protein of unknown function (DUF2500) E3399_RS01385 PF06611 Protein of unknown function (DUF1145) E3399_RS01395 PF02881 SRP54-type protein, helical bundle domain E3399_RS01395 PF00448 SRP54-type protein, GTPase domain E3399_RS01400 PF00005 ABC transporter E3399_RS01405 PF02687 FtsX-like permease family E3399_RS01405 PF18075 FtsX extracellular domain E3399_RS01410 PF04542 Sigma-70 region 2 E3399_RS01410 PF04545 Sigma-70, region 4 E3399_RS01415 PF13458 Periplasmic binding protein E3399_RS01425 PF12568 Acetyltransferase (GNAT) domain, PanZ E3399_RS01430 PF13458 Periplasmic binding protein E3399_RS01435 PF02653 Branched-chain amino acid transport system / permease component E3399_RS01440 PF11862 Domain of unknown function (DUF3382) E3399_RS01440 PF02653 Branched-chain amino acid transport system / permease component E3399_RS01445 PF00005 ABC transporter E3399_RS01445 PF12399 Branched-chain amino acid ATP-binding cassette transporter E3399_RS01450 PF00005 ABC transporter E3399_RS01460 PF13416 Bacterial extracellular solute-binding protein E3399_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS01475 PF00005 ABC transporter E3399_RS01475 PF17912 MalK OB fold domain E3399_RS01480 PF03009 Glycerophosphoryl diester phosphodiesterase family E3399_RS01485 PF10956 Protein of unknown function (DUF2756) E3399_RS01495 PF02126 Phosphotriesterase family E3399_RS01510 PF00294 pfkB family carbohydrate kinase E3399_RS01515 PF00583 Acetyltransferase (GNAT) family E3399_RS01520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS01520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3399_RS01525 PF02678 Pirin E3399_RS01525 PF17954 Quercetinase C-terminal cupin domain E3399_RS01530 PF00356 Bacterial regulatory proteins, lacI family E3399_RS01530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3399_RS01535 PF01202 Shikimate kinase E3399_RS01540 PF02447 GntP family permease E3399_RS01550 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3399_RS01550 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3399_RS01555 PF00128 Alpha amylase, catalytic domain E3399_RS01555 PF02806 Alpha amylase, C-terminal all-beta domain E3399_RS01555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3399_RS01560 PF00128 Alpha amylase, catalytic domain E3399_RS01560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3399_RS01560 PF18390 Glycogen debranching enzyme C-terminal domain E3399_RS01565 PF00483 Nucleotidyl transferase E3399_RS01570 PF08323 Starch synthase catalytic domain E3399_RS01570 PF00534 Glycosyl transferases group 1 E3399_RS01575 PF00343 Carbohydrate phosphorylase E3399_RS01580 PF09339 IclR helix-turn-helix domain E3399_RS01580 PF01614 Bacterial transcriptional regulator E3399_RS01585 PF00701 Dihydrodipicolinate synthetase family E3399_RS01590 PF00920 Dehydratase family E3399_RS01595 PF07690 Major Facilitator Superfamily E3399_RS01600 PF00465 Iron-containing alcohol dehydrogenase E3399_RS01615 PF01266 FAD dependent oxidoreductase E3399_RS01615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E3399_RS01620 PF00581 Rhodanese-like domain E3399_RS01625 PF01694 Rhomboid family E3399_RS01625 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E3399_RS01630 PF08220 DeoR-like helix-turn-helix domain E3399_RS01630 PF00455 DeoR C terminal sensor domain E3399_RS01635 PF00158 Sigma-54 interaction domain E3399_RS01635 PF06956 Regulator of RNA terminal phosphate cyclase E3399_RS01645 PF01139 tRNA-splicing ligase RtcB E3399_RS01650 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain E3399_RS01650 PF01137 RNA 3'-terminal phosphate cyclase E3399_RS01655 PF04221 RelB antitoxin E3399_RS01660 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ E3399_RS01665 PF00196 Bacterial regulatory proteins, luxR family E3399_RS01665 PF17874 MalT-like TPR region E3399_RS01670 PF00343 Carbohydrate phosphorylase E3399_RS01675 PF02446 4-alpha-glucanotransferase E3399_RS01680 PF02447 GntP family permease E3399_RS01685 PF01521 Iron-sulphur cluster biosynthesis E3399_RS01685 PF01106 NifU-like domain E3399_RS01690 PF00156 Phosphoribosyl transferase domain E3399_RS01695 PF00561 alpha/beta hydrolase fold E3399_RS01700 PF04754 Putative transposase, YhgA-like E3399_RS01705 PF09012 FeoC like transcriptional regulator E3399_RS01710 PF07664 Ferrous iron transport protein B C terminus E3399_RS01710 PF07670 Nucleoside recognition E3399_RS01710 PF02421 Ferrous iron transport protein B E3399_RS01710 PF17910 FeoB cytosolic helical domain E3399_RS01715 PF04023 FeoA domain E3399_RS01720 PF16921 Tex protein YqgF-like domain E3399_RS01720 PF17674 HHH domain E3399_RS01720 PF09371 Tex-like protein N-terminal domain E3399_RS01720 PF00575 S1 RNA binding domain E3399_RS01725 PF03449 Transcription elongation factor, N-terminal E3399_RS01725 PF01272 Transcription elongation factor, GreA/GreB, C-term E3399_RS01730 PF00486 Transcriptional regulatory protein, C terminal E3399_RS01730 PF00072 Response regulator receiver domain E3399_RS01735 PF00672 HAMP domain E3399_RS01735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS01735 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS01740 PF01293 Phosphoenolpyruvate carboxykinase E3399_RS01745 PF13687 Domain of unknown function (DUF4153) E3399_RS01750 PF01430 Hsp33 protein E3399_RS01755 PF01479 S4 domain E3399_RS01760 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS01765 PF07095 Intracellular growth attenuator protein IgaA E3399_RS01770 PF00293 NUDIX domain E3399_RS01775 PF00905 Penicillin binding protein transpeptidase domain E3399_RS01775 PF00912 Transglycosylase E3399_RS01775 PF17092 Penicillin-binding protein OB-like domain E3399_RS01785 PF05137 Fimbrial assembly protein (PilN) E3399_RS01795 PF10748 DNA utilization proteins HofP E3399_RS01800 PF03958 Bacterial type II/III secretion system short domain E3399_RS01800 PF00263 Bacterial type II and III secretion system protein E3399_RS01805 PF01202 Shikimate kinase E3399_RS01810 PF01761 3-dehydroquinate synthase E3399_RS01815 PF05036 Sporulation related domain E3399_RS01820 PF02086 D12 class N6 adenine-specific DNA methyltransferase E3399_RS01825 PF00834 Ribulose-phosphate 3 epimerase family E3399_RS01830 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS01835 PF00579 tRNA synthetases class I (W and Y) E3399_RS01840 PF13978 Protein of unknown function (DUF4223) E3399_RS01850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS01850 PF14824 Sirohaem biosynthesis protein central E3399_RS01850 PF10414 Sirohaem synthase dimerisation region E3399_RS01855 PF01226 Formate/nitrite transporter E3399_RS01860 PF13806 Rieske-like [2Fe-2S] domain E3399_RS01865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3399_RS01865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3399_RS01865 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS01865 PF18267 Rubredoxin NAD+ reductase C-terminal domain E3399_RS01865 PF04324 BFD-like [2Fe-2S] binding domain E3399_RS01870 PF07690 Major Facilitator Superfamily E3399_RS01875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E3399_RS01880 PF10832 Protein of unknown function (DUF2559) E3399_RS01885 PF02661 Fic/DOC family E3399_RS01890 PF00117 Glutamine amidotransferase class-I E3399_RS01895 PF00202 Aminotransferase class-III E3399_RS01900 PF12805 FUSC-like inner membrane protein yccS E3399_RS01905 PF13545 Crp-like helix-turn-helix domain E3399_RS01905 PF00027 Cyclic nucleotide-binding domain E3399_RS01910 PF02566 OsmC-like protein E3399_RS01915 PF00485 Phosphoribulokinase / Uridine kinase family E3399_RS01920 PF06794 Uncharacterised protein family (UPF0270) E3399_RS01925 PF00561 alpha/beta hydrolase fold E3399_RS01930 PF08803 Putative mono-oxygenase ydhR E3399_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS01935 PF03466 LysR substrate binding domain E3399_RS01940 PF12848 ABC transporter E3399_RS01940 PF00005 ABC transporter E3399_RS01945 PF02525 Flavodoxin-like fold E3399_RS01950 PF02254 TrkA-N domain E3399_RS01950 PF00999 Sodium/hydrogen exchanger family E3399_RS01955 PF09526 Probable metal-binding protein (DUF2387) E3399_RS01960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3399_RS01965 PF04102 SlyX E3399_RS01970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3399_RS01970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E3399_RS01975 PF13309 HTH domain E3399_RS01975 PF08348 YheO-like PAS domain E3399_RS01980 PF02635 DsrE/DsrF-like family E3399_RS01985 PF02635 DsrE/DsrF-like family E3399_RS01990 PF04077 DsrH like protein E3399_RS01995 PF00164 Ribosomal protein S12/S23 E3399_RS02000 PF00177 Ribosomal protein S7p/S5e E3399_RS02005 PF00009 Elongation factor Tu GTP binding domain E3399_RS02005 PF03764 Elongation factor G, domain IV E3399_RS02005 PF03144 Elongation factor Tu domain 2 E3399_RS02005 PF00679 Elongation factor G C-terminus E3399_RS02005 PF14492 Elongation Factor G, domain II E3399_RS02010 PF00009 Elongation factor Tu GTP binding domain E3399_RS02010 PF03143 Elongation factor Tu C-terminal domain E3399_RS02010 PF03144 Elongation factor Tu domain 2 E3399_RS02015 PF04324 BFD-like [2Fe-2S] binding domain E3399_RS02020 PF00210 Ferritin-like domain E3399_RS02025 PF01478 Type IV leader peptidase family E3399_RS02030 PF00338 Ribosomal protein S10p/S20e E3399_RS02035 PF00297 Ribosomal protein L3 E3399_RS02040 PF00573 Ribosomal protein L4/L1 family E3399_RS02045 PF00276 Ribosomal protein L23 E3399_RS02050 PF03947 Ribosomal Proteins L2, C-terminal domain E3399_RS02050 PF00181 Ribosomal Proteins L2, RNA binding domain E3399_RS02055 PF00203 Ribosomal protein S19 E3399_RS02060 PF00237 Ribosomal protein L22p/L17e E3399_RS02065 PF07650 KH domain E3399_RS02065 PF00189 Ribosomal protein S3, C-terminal domain E3399_RS02070 PF00252 Ribosomal protein L16p/L10e E3399_RS02075 PF00831 Ribosomal L29 protein E3399_RS02080 PF00366 Ribosomal protein S17 E3399_RS02085 PF00238 Ribosomal protein L14p/L23e E3399_RS02090 PF00467 KOW motif E3399_RS02090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E3399_RS02095 PF00281 Ribosomal protein L5 E3399_RS02095 PF00673 ribosomal L5P family C-terminus E3399_RS02100 PF00253 Ribosomal protein S14p/S29e E3399_RS02105 PF00410 Ribosomal protein S8 E3399_RS02110 PF00347 Ribosomal protein L6 E3399_RS02115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E3399_RS02120 PF03719 Ribosomal protein S5, C-terminal domain E3399_RS02120 PF00333 Ribosomal protein S5, N-terminal domain E3399_RS02125 PF00327 Ribosomal protein L30p/L7e E3399_RS02130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E3399_RS02135 PF00344 SecY translocase E3399_RS02140 PF00444 Ribosomal protein L36 E3399_RS02145 PF00416 Ribosomal protein S13/S18 E3399_RS02150 PF00411 Ribosomal protein S11 E3399_RS02155 PF00163 Ribosomal protein S4/S9 N-terminal domain E3399_RS02155 PF01479 S4 domain E3399_RS02160 PF01000 RNA polymerase Rpb3/RpoA insert domain E3399_RS02160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E3399_RS02160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E3399_RS02165 PF01196 Ribosomal protein L17 E3399_RS02170 PF09350 Domain of unknown function (DUF1992) E3399_RS02175 PF13411 MerR HTH family regulatory protein E3399_RS02180 PF03889 Alternative ribosome-rescue factor A E3399_RS02185 PF01741 Large-conductance mechanosensitive channel, MscL E3399_RS02190 PF02080 TrkA-C domain E3399_RS02190 PF02254 TrkA-N domain E3399_RS02195 PF01189 16S rRNA methyltransferase RsmB/F E3399_RS02195 PF01029 NusB family E3399_RS02200 PF02911 Formyl transferase, C-terminal domain E3399_RS02200 PF00551 Formyl transferase E3399_RS02205 PF01327 Polypeptide deformylase E3399_RS02210 PF17782 DprA winged helix domain E3399_RS02210 PF02481 DNA recombination-mediator protein A E3399_RS02215 PF04361 Protein of unknown function (DUF494) E3399_RS02220 PF01396 Topoisomerase DNA binding C4 zinc finger E3399_RS02225 PF01300 Telomere recombination E3399_RS02230 PF08501 Shikimate dehydrogenase substrate binding domain E3399_RS02230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3399_RS02230 PF01488 Shikimate / quinate 5-dehydrogenase E3399_RS02235 PF07369 Protein of unknown function (DUF1488) E3399_RS02240 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS02280 PF00873 AcrB/AcrD/AcrF family E3399_RS02285 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS02285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS02290 PF00440 Bacterial regulatory proteins, tetR family E3399_RS02290 PF08361 MAATS-type transcriptional repressor, C-terminal region E3399_RS02295 PF03707 Bacterial signalling protein N terminal repeat E3399_RS02295 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS02295 PF00563 EAL domain E3399_RS02300 PF10831 Protein of unknown function (DUF2556) E3399_RS02305 PF01555 DNA methylase E3399_RS02310 PF02954 Bacterial regulatory protein, Fis family E3399_RS02315 PF01207 Dihydrouridine synthase (Dus) E3399_RS02330 PF00474 Sodium:solute symporter family E3399_RS02335 PF06196 Protein of unknown function (DUF997) E3399_RS02340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3399_RS02340 PF02785 Biotin carboxylase C-terminal domain E3399_RS02340 PF00289 Biotin carboxylase, N-terminal domain E3399_RS02345 PF00364 Biotin-requiring enzyme E3399_RS02350 PF01794 Ferric reductase like transmembrane component E3399_RS02355 PF00174 Oxidoreductase molybdopterin binding domain E3399_RS02360 PF00107 Zinc-binding dehydrogenase E3399_RS02360 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS02365 PF00563 EAL domain E3399_RS02365 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS02365 PF17157 Gammaproteobacterial periplasmic sensor domain E3399_RS02375 PF04085 rod shape-determining protein MreC E3399_RS02380 PF04093 rod shape-determining protein MreD E3399_RS02385 PF02545 Maf-like protein E3399_RS02390 PF00575 S1 RNA binding domain E3399_RS02390 PF10150 Ribonuclease E/G family E3399_RS02395 PF13116 Protein of unknown function E3399_RS02395 PF13502 AsmA-like C-terminal region E3399_RS02400 PF01523 Putative modulator of DNA gyrase E3399_RS02405 PF03466 LysR substrate binding domain E3399_RS02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS02410 PF07869 Protein of unknown function (DUF1656) E3399_RS02415 PF13533 Biotin-lipoyl like E3399_RS02420 PF04632 Fusaric acid resistance protein family E3399_RS02425 PF01337 Barstar (barnase inhibitor) E3399_RS02430 PF07338 Protein of unknown function (DUF1471) E3399_RS02435 PF07338 Protein of unknown function (DUF1471) E3399_RS02440 PF02863 Arginine repressor, C-terminal domain E3399_RS02440 PF01316 Arginine repressor, DNA binding domain E3399_RS02445 PF00056 lactate/malate dehydrogenase, NAD binding domain E3399_RS02445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E3399_RS02450 PF07702 UTRA domain E3399_RS02450 PF00392 Bacterial regulatory proteins, gntR family E3399_RS02460 PF00939 Sodium:sulfate symporter transmembrane region E3399_RS02465 PF05681 Fumarate hydratase (Fumerase) E3399_RS02470 PF05683 Fumarase C-terminus E3399_RS02475 PF04277 Oxaloacetate decarboxylase, gamma chain E3399_RS02480 PF02436 Conserved carboxylase domain E3399_RS02480 PF00364 Biotin-requiring enzyme E3399_RS02480 PF00682 HMGL-like E3399_RS02485 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E3399_RS02490 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E3399_RS02495 PF13180 PDZ domain E3399_RS02500 PF00595 PDZ domain E3399_RS02500 PF13180 PDZ domain E3399_RS02505 PF06295 Protein of unknown function (DUF1043) E3399_RS02510 PF03969 AFG1-like ATPase E3399_RS02515 PF00572 Ribosomal protein L13 E3399_RS02520 PF00380 Ribosomal protein S9/S16 E3399_RS02535 PF00043 Glutathione S-transferase, C-terminal domain E3399_RS02535 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS02540 PF04386 Stringent starvation protein B E3399_RS02545 PF07729 FCD domain E3399_RS02545 PF00392 Bacterial regulatory proteins, gntR family E3399_RS02550 PF00701 Dihydrodipicolinate synthetase family E3399_RS02555 PF07690 Major Facilitator Superfamily E3399_RS02560 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E3399_RS02565 PF00480 ROK family E3399_RS02570 PF04074 YhcH/YjgK/YiaL E3399_RS02575 PF07969 Amidohydrolase family E3399_RS02580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3399_RS02585 PF06250 YhcG PDDEXK nuclease domain E3399_RS02585 PF17761 DUF1016 N-terminal domain E3399_RS02590 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS02590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3399_RS02595 PF00310 Glutamine amidotransferases class-II E3399_RS02595 PF04898 Glutamate synthase central domain E3399_RS02595 PF01645 Conserved region in glutamate synthase E3399_RS02595 PF01493 GXGXG motif E3399_RS02600 PF04055 Radical SAM superfamily E3399_RS02600 PF16199 Radical_SAM C-terminal domain E3399_RS02605 PF01627 Hpt domain E3399_RS02605 PF00072 Response regulator receiver domain E3399_RS02605 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS02605 PF18415 Histidine kinase receptor ArcB trans-membrane domain E3399_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS02605 PF00989 PAS fold E3399_RS02615 PF00912 Transglycosylase E3399_RS02620 PF10707 PhoP regulatory network protein YrbL E3399_RS02625 PF00381 PTS HPr component phosphorylation site E3399_RS02630 PF03668 P-loop ATPase protein family E3399_RS02635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS02640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E3399_RS02645 PF00309 Sigma-54 factor, Activator interacting domain (AID) E3399_RS02645 PF04963 Sigma-54 factor, core binding domain E3399_RS02645 PF04552 Sigma-54, DNA binding domain E3399_RS02650 PF00005 ABC transporter E3399_RS02650 PF12399 Branched-chain amino acid ATP-binding cassette transporter E3399_RS02655 PF03968 OstA-like protein E3399_RS02660 PF06835 Lipopolysaccharide-assembly, LptC-related E3399_RS02670 PF00571 CBS domain E3399_RS02670 PF01380 SIS domain E3399_RS02675 PF01699 Sodium/calcium exchanger protein E3399_RS02680 PF00005 ABC transporter E3399_RS02685 PF02405 Permease MlaE E3399_RS02690 PF02470 MlaD protein E3399_RS02695 PF05494 MlaC protein E3399_RS02700 PF13466 STAS domain E3399_RS02705 PF01722 BolA-like protein E3399_RS02710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3399_RS02715 PF13693 Winged helix-turn-helix DNA-binding E3399_RS02720 PF00348 Polyprenyl synthetase E3399_RS02725 PF00829 Ribosomal prokaryotic L21 protein E3399_RS02730 PF01016 Ribosomal L27 protein E3399_RS02735 PF00892 EamA-like transporter family E3399_RS02740 PF01018 GTP1/OBG E3399_RS02740 PF01926 50S ribosome-binding GTPase E3399_RS02745 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E3399_RS02750 PF01272 Transcription elongation factor, GreA/GreB, C-term E3399_RS02750 PF03449 Transcription elongation factor, N-terminal E3399_RS02755 PF01985 CRS1 / YhbY (CRM) domain E3399_RS02760 PF01728 FtsJ-like methyltransferase E3399_RS02765 PF17862 AAA+ lid domain E3399_RS02765 PF01434 Peptidase family M41 E3399_RS02765 PF06480 FtsH Extracellular E3399_RS02765 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS02770 PF00809 Pterin binding enzyme E3399_RS02775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3399_RS02775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3399_RS02775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3399_RS02775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3399_RS02780 PF03840 Preprotein translocase SecG subunit E3399_RS02795 PF00764 Arginosuccinate synthase E3399_RS02805 PF17384 RimP C-terminal SH3 domain E3399_RS02805 PF02576 RimP N-terminal domain E3399_RS02810 PF08529 NusA N-terminal domain E3399_RS02810 PF13184 NusA-like KH domain E3399_RS02815 PF04760 Translation initiation factor IF-2, N-terminal region E3399_RS02815 PF08364 Bacterial translation initiation factor IF-2 associated region E3399_RS02815 PF11987 Translation-initiation factor 2 E3399_RS02815 PF00009 Elongation factor Tu GTP binding domain E3399_RS02820 PF02033 Ribosome-binding factor A E3399_RS02825 PF09157 Pseudouridine synthase II TruB, C-terminal E3399_RS02825 PF16198 tRNA pseudouridylate synthase B C-terminal domain E3399_RS02825 PF01509 TruB family pseudouridylate synthase (N terminal domain) E3399_RS02830 PF00312 Ribosomal protein S15 E3399_RS02835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E3399_RS02835 PF01138 3' exoribonuclease family, domain 1 E3399_RS02835 PF03725 3' exoribonuclease family, domain 2 E3399_RS02835 PF00013 KH domain E3399_RS02835 PF00575 S1 RNA binding domain E3399_RS02840 PF07719 Tetratricopeptide repeat E3399_RS02840 PF13181 Tetratricopeptide repeat E3399_RS02850 PF00271 Helicase conserved C-terminal domain E3399_RS02850 PF12343 Cold shock protein DEAD box A E3399_RS02850 PF03880 DbpA RNA binding domain E3399_RS02850 PF00270 DEAD/DEAH box helicase E3399_RS02855 PF03222 Tryptophan/tyrosine permease family E3399_RS02865 PF03734 L,D-transpeptidase catalytic domain E3399_RS02870 PF00296 Luciferase-like monooxygenase E3399_RS02875 PF01136 Peptidase family U32 E3399_RS02880 PF01136 Peptidase family U32 E3399_RS02885 PF02036 SCP-2 sterol transfer family E3399_RS02890 PF13508 Acetyltransferase (GNAT) domain E3399_RS02895 PF01541 GIY-YIG catalytic domain E3399_RS02905 PF01965 DJ-1/PfpI family E3399_RS02910 PF13460 NAD(P)H-binding E3399_RS02915 PF04972 BON domain E3399_RS02920 PF13580 SIS domain E3399_RS02925 PF02021 Uncharacterised protein family UPF0102 E3399_RS02930 PF04348 LppC putative lipoprotein E3399_RS02935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS02940 PF08220 DeoR-like helix-turn-helix domain E3399_RS02945 PF00107 Zinc-binding dehydrogenase E3399_RS02945 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS02950 PF03611 PTS system sugar-specific permease component E3399_RS02955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS02960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS02965 PF08013 Tagatose 6 phosphate kinase E3399_RS02970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS02970 PF00381 PTS HPr component phosphorylation site E3399_RS02975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS02975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS02980 PF00294 pfkB family carbohydrate kinase E3399_RS02985 PF01116 Fructose-bisphosphate aldolase class-II E3399_RS02990 PF00455 DeoR C terminal sensor domain E3399_RS02990 PF08220 DeoR-like helix-turn-helix domain E3399_RS02995 PF00294 pfkB family carbohydrate kinase E3399_RS03000 PF08666 SAF domain E3399_RS03000 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E3399_RS03005 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS03010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3399_RS03010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3399_RS03015 PF02595 Glycerate kinase family E3399_RS03025 PF03466 LysR substrate binding domain E3399_RS03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS03030 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS03035 PF03222 Tryptophan/tyrosine permease family E3399_RS03040 PF00871 Acetokinase family E3399_RS03045 PF01228 Glycine radical E3399_RS03045 PF02901 Pyruvate formate lyase-like E3399_RS03050 PF03315 Serine dehydratase beta chain E3399_RS03050 PF03313 Serine dehydratase alpha chain E3399_RS03060 PF03313 Serine dehydratase alpha chain E3399_RS03070 PF17954 Quercetinase C-terminal cupin domain E3399_RS03070 PF02678 Pirin E3399_RS03075 PF03466 LysR substrate binding domain E3399_RS03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS03080 PF05656 Protein of unknown function (DUF805) E3399_RS03085 PF13409 Glutathione S-transferase, N-terminal domain E3399_RS03090 PF07681 DoxX E3399_RS03095 PF13997 YqjK-like protein E3399_RS03100 PF07332 Putative Actinobacterial Holin-X, holin superfamily III E3399_RS03105 PF05957 Bacterial protein of unknown function (DUF883) E3399_RS03110 PF06476 Protein of unknown function (DUF1090) E3399_RS03115 PF13721 SecD export protein N-terminal TM region E3399_RS03120 PF09335 SNARE associated Golgi protein E3399_RS03125 PF00375 Sodium:dicarboxylate symporter family E3399_RS03130 PF03741 Integral membrane protein TerC family E3399_RS03135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS03140 PF02698 DUF218 domain E3399_RS03145 PF01863 Protein of unknown function DUF45 E3399_RS03155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3399_RS03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS03160 PF00202 Aminotransferase class-III E3399_RS03165 PF08447 PAS fold E3399_RS03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS03165 PF08447 PAS fold E3399_RS03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS03170 PF00672 HAMP domain E3399_RS03170 PF02203 Tar ligand binding domain homologue E3399_RS03175 PF03551 Transcriptional regulator PadR-like family E3399_RS03180 PF04954 Siderophore-interacting protein E3399_RS03180 PF08021 Siderophore-interacting FAD-binding domain E3399_RS03190 PF03167 Uracil DNA glycosylase superfamily E3399_RS03195 PF04545 Sigma-70, region 4 E3399_RS03195 PF00140 Sigma-70 factor, region 1.2 E3399_RS03195 PF04542 Sigma-70 region 2 E3399_RS03195 PF03979 Sigma-70 factor, region 1.1 E3399_RS03195 PF04539 Sigma-70 region 3 E3399_RS03195 PF04546 Sigma-70, non-essential region E3399_RS03200 PF10410 DnaB-helicase binding domain of primase E3399_RS03200 PF08275 DNA primase catalytic core, N-terminal domain E3399_RS03200 PF01807 CHC2 zinc finger E3399_RS03200 PF08278 DNA primase DnaG DnaB-binding E3399_RS03205 PF01165 Ribosomal protein S21 E3399_RS03210 PF00814 Glycoprotease family E3399_RS03225 PF02660 Glycerol-3-phosphate acyltransferase E3399_RS03230 PF02152 Dihydroneopterin aldolase E3399_RS03235 PF02673 Bacitracin resistance protein BacA E3399_RS03240 PF12627 Probable RNA and SrmB- binding site of polymerase A E3399_RS03240 PF01743 Poly A polymerase head domain E3399_RS03240 PF01966 HD domain E3399_RS03245 PF08239 Bacterial SH3 domain E3399_RS03250 PF01928 CYTH domain E3399_RS03255 PF08335 GlnD PII-uridylyltransferase E3399_RS03255 PF03710 Glutamate-ammonia ligase adenylyltransferase E3399_RS03260 PF01467 Cytidylyltransferase-like E3399_RS03260 PF00294 pfkB family carbohydrate kinase E3399_RS03270 PF01145 SPFH domain / Band 7 family E3399_RS03270 PF15975 Flotillin E3399_RS03275 PF07290 Protein of unknown function (DUF1449) E3399_RS03280 PF08971 Glycogen synthesis protein E3399_RS03285 PF04380 Membrane fusogenic activity E3399_RS03290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E3399_RS03295 PF02600 Disulfide bond formation protein DsbB E3399_RS03300 PF01323 DSBA-like thioredoxin domain E3399_RS03305 PF05935 Arylsulfotransferase (ASST) E3399_RS03305 PF17425 Arylsulfotransferase Ig-like domain E3399_RS03310 PF02535 ZIP Zinc transporter E3399_RS03315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E3399_RS03320 PF03738 Glutathionylspermidine synthase preATP-grasp E3399_RS03325 PF06693 Protein of unknown function (DUF1190) E3399_RS03330 PF02321 Outer membrane efflux protein E3399_RS03335 PF00293 NUDIX domain E3399_RS03340 PF06853 Protein of unknown function (DUF1249) E3399_RS03345 PF00149 Calcineurin-like phosphoesterase E3399_RS03350 PF05728 Uncharacterised protein family (UPF0227) E3399_RS03355 PF00204 DNA gyrase B E3399_RS03355 PF00986 DNA gyrase B subunit, carboxyl terminus E3399_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS03355 PF01751 Toprim domain E3399_RS03360 PF03992 Antibiotic biosynthesis monooxygenase E3399_RS03365 PF02525 Flavodoxin-like fold E3399_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS03370 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS03370 PF08521 Two-component sensor kinase N-terminal E3399_RS03375 PF00072 Response regulator receiver domain E3399_RS03375 PF00486 Transcriptional regulatory protein, C terminal E3399_RS03380 PF04076 Bacterial OB fold (BOF) protein E3399_RS03385 PF06445 GyrI-like small molecule binding domain E3399_RS03390 PF03989 DNA gyrase C-terminal domain, beta-propeller E3399_RS03390 PF00521 DNA gyrase/topoisomerase IV, subunit A E3399_RS03395 PF01553 Acyltransferase E3399_RS03400 PF07732 Multicopper oxidase E3399_RS03400 PF00394 Multicopper oxidase E3399_RS03400 PF07731 Multicopper oxidase E3399_RS03405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E3399_RS03415 PF03480 Bacterial extracellular solute-binding protein, family 7 E3399_RS03420 PF11842 Domain of unknown function (DUF3362) E3399_RS03420 PF08497 Radical SAM N-terminal E3399_RS03420 PF04055 Radical SAM superfamily E3399_RS03435 PF00939 Sodium:sulfate symporter transmembrane region E3399_RS03440 PF00248 Aldo/keto reductase family E3399_RS03445 PF00465 Iron-containing alcohol dehydrogenase E3399_RS03450 PF12833 Helix-turn-helix domain E3399_RS03450 PF06719 AraC-type transcriptional regulator N-terminus E3399_RS03455 PF09335 SNARE associated Golgi protein E3399_RS03460 PF01053 Cys/Met metabolism PLP-dependent enzyme E3399_RS03465 PF01618 MotA/TolQ/ExbB proton channel family E3399_RS03470 PF02472 Biopolymer transport protein ExbD/TolR E3399_RS03495 PF03350 Uncharacterized protein family, UPF0114 E3399_RS03500 PF02203 Tar ligand binding domain homologue E3399_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS03500 PF00672 HAMP domain E3399_RS03505 PF11115 Protein of unknown function (DUF2623) E3399_RS03510 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E3399_RS03510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3399_RS03515 PF13247 4Fe-4S dicluster domain E3399_RS03520 PF03916 Polysulphide reductase, NrfD E3399_RS03525 PF00374 Nickel-dependent hydrogenase E3399_RS03530 PF01750 Hydrogenase maturation protease E3399_RS03535 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E3399_RS03540 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E3399_RS03545 PF01455 HupF/HypC family E3399_RS03550 PF01497 Periplasmic binding protein E3399_RS03560 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS03565 PF03738 Glutathionylspermidine synthase preATP-grasp E3399_RS03565 PF05257 CHAP domain E3399_RS03575 PF02614 Glucuronate isomerase E3399_RS03580 PF01232 Mannitol dehydrogenase Rossmann domain E3399_RS03580 PF08125 Mannitol dehydrogenase C-terminal domain E3399_RS03585 PF03786 D-mannonate dehydratase (UxuA) E3399_RS03590 PF07690 Major Facilitator Superfamily E3399_RS03600 PF01522 Polysaccharide deacetylase E3399_RS03610 PF04965 Gene 25-like lysozyme E3399_RS03615 PF00171 Aldehyde dehydrogenase family E3399_RS03620 PF01266 FAD dependent oxidoreductase E3399_RS03630 PF13520 Amino acid permease E3399_RS03640 PF00196 Bacterial regulatory proteins, luxR family E3399_RS03645 PF04055 Radical SAM superfamily E3399_RS03650 PF00884 Sulfatase E3399_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS03655 PF03466 LysR substrate binding domain E3399_RS03660 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS03665 PF01575 MaoC like domain E3399_RS03670 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain E3399_RS03670 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain E3399_RS03675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3399_RS03685 PF04474 Protein of unknown function (DUF554) E3399_RS03690 PF01276 Orn/Lys/Arg decarboxylase, major domain E3399_RS03690 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3399_RS03690 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3399_RS03695 PF03825 Nucleoside H+ symporter E3399_RS03700 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E3399_RS03700 PF01464 Transglycosylase SLT domain E3399_RS03705 PF04362 Bacterial Fe(2+) trafficking E3399_RS03710 PF00633 Helix-hairpin-helix motif E3399_RS03710 PF00730 HhH-GPD superfamily base excision DNA repair protein E3399_RS03710 PF14815 NUDIX domain E3399_RS03715 PF02390 Putative methyltransferase E3399_RS03720 PF04320 Protein with unknown function (DUF469) E3399_RS03725 PF11101 Protein of unknown function (DUF2884) E3399_RS03730 PF17763 Glutaminase/Asparaginase C-terminal domain E3399_RS03730 PF00710 Asparaginase, N-terminal E3399_RS03735 PF06717 Protein of unknown function (DUF1202) E3399_RS03740 PF04055 Radical SAM superfamily E3399_RS03740 PF06969 HemN C-terminal domain E3399_RS03745 PF01725 Ham1 family E3399_RS03750 PF02594 Uncharacterised ACR, YggU family COG1872 E3399_RS03755 PF02325 YGGT family E3399_RS03760 PF01168 Alanine racemase, N-terminal domain E3399_RS03765 PF00437 Type II/IV secretion system protein E3399_RS03775 PF03652 Holliday junction resolvase E3399_RS03780 PF02622 Uncharacterized ACR, COG1678 E3399_RS03785 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E3399_RS03785 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E3399_RS03790 PF04452 RNA methyltransferase E3399_RS03795 PF04231 Endonuclease I E3399_RS03800 PF17283 SprT-like zinc ribbon domain E3399_RS03800 PF10263 SprT-like family E3399_RS03805 PF00083 Sugar (and other) transporter E3399_RS03810 PF02772 S-adenosylmethionine synthetase, central domain E3399_RS03810 PF00438 S-adenosylmethionine synthetase, N-terminal domain E3399_RS03810 PF02773 S-adenosylmethionine synthetase, C-terminal domain E3399_RS03820 PF17810 Arginine decarboxylase helical bundle domain E3399_RS03820 PF17944 Arginine decarboxylase C-terminal helical extension E3399_RS03820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3399_RS03830 PF07729 FCD domain E3399_RS03830 PF00392 Bacterial regulatory proteins, gntR family E3399_RS03840 PF01232 Mannitol dehydrogenase Rossmann domain E3399_RS03840 PF08125 Mannitol dehydrogenase C-terminal domain E3399_RS03845 PF00107 Zinc-binding dehydrogenase E3399_RS03845 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS03850 PF02615 Malate/L-lactate dehydrogenase E3399_RS03855 PF04074 YhcH/YjgK/YiaL E3399_RS03860 PF12697 Alpha/beta hydrolase family E3399_RS03865 PF00491 Arginase family E3399_RS03870 PF01435 Peptidase family M48 E3399_RS03875 PF00456 Transketolase, thiamine diphosphate binding domain E3399_RS03875 PF02779 Transketolase, pyrimidine binding domain E3399_RS03875 PF02780 Transketolase, C-terminal domain E3399_RS03880 PF00005 ABC transporter E3399_RS03885 PF00005 ABC transporter E3399_RS03905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3399_RS03905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3399_RS03910 PF00162 Phosphoglycerate kinase E3399_RS03915 PF01116 Fructose-bisphosphate aldolase class-II E3399_RS03920 PF00924 Mechanosensitive ion channel E3399_RS03920 PF05552 Conserved TM helix E3399_RS03925 PF01810 LysE type translocator E3399_RS03930 PF04402 Protein of unknown function (DUF541) E3399_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS03935 PF03466 LysR substrate binding domain E3399_RS03940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E3399_RS03945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3399_RS03945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3399_RS03945 PF01842 ACT domain E3399_RS03950 PF01812 5-formyltetrahydrofolate cyclo-ligase family E3399_RS03960 PF05164 Cell division protein ZapA E3399_RS03965 PF03695 Uncharacterised protein family (UPF0149) E3399_RS03970 PF00557 Metallopeptidase family M24 E3399_RS03970 PF05195 Aminopeptidase P, N-terminal domain E3399_RS03975 PF01494 FAD binding domain E3399_RS03980 PF01494 FAD binding domain E3399_RS03985 PF01571 Aminomethyltransferase folate-binding domain E3399_RS03985 PF08669 Glycine cleavage T-protein C-terminal barrel domain E3399_RS03990 PF01597 Glycine cleavage H-protein E3399_RS03995 PF02347 Glycine cleavage system P-protein E3399_RS04010 PF00232 Glycosyl hydrolase family 1 E3399_RS04015 PF04266 ASCH domain E3399_RS04020 PF03006 Haemolysin-III related E3399_RS04025 PF01571 Aminomethyltransferase folate-binding domain E3399_RS04030 PF03937 Flavinator of succinate dehydrogenase E3399_RS04035 PF07254 Membrane-bound toxin component of toxin-antitoxin system E3399_RS04040 PF00258 Flavodoxin E3399_RS04045 PF00589 Phage integrase family E3399_RS04045 PF02899 Phage integrase, N-terminal SAM-like domain E3399_RS04050 PF10411 Disulfide bond isomerase protein N-terminus E3399_RS04050 PF13098 Thioredoxin-like domain E3399_RS04055 PF17768 RecJ OB domain E3399_RS04055 PF02272 DHHA1 domain E3399_RS04055 PF01368 DHH family E3399_RS04065 PF00152 tRNA synthetases class II (D, K and N) E3399_RS04065 PF01336 OB-fold nucleic acid binding domain E3399_RS04070 PF00293 NUDIX domain E3399_RS04080 PF01551 Peptidase family M23 E3399_RS04080 PF01476 LysM domain E3399_RS04090 PF00589 Phage integrase family E3399_RS04090 PF14659 Phage integrase, N-terminal SAM-like domain E3399_RS04090 PF13356 Arm DNA-binding domain E3399_RS04105 PF01022 Bacterial regulatory protein, arsR family E3399_RS04110 PF06953 Arsenical resistance operon trans-acting repressor ArsD E3399_RS04115 PF02374 Anion-transporting ATPase E3399_RS04120 PF02040 Arsenical pump membrane protein E3399_RS04125 PF03960 ArsC family E3399_RS04140 PF02374 Anion-transporting ATPase E3399_RS04145 PF06953 Arsenical resistance operon trans-acting repressor ArsD E3399_RS04155 PF03358 NADPH-dependent FMN reductase E3399_RS04190 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS04190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS04195 PF13954 PapC N-terminal domain E3399_RS04195 PF00577 Outer membrane usher protein E3399_RS04195 PF13953 PapC C-terminal domain E3399_RS04205 PF02308 MgtC family E3399_RS04250 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS04255 PF14864 Alkyl sulfatase C-terminal E3399_RS04255 PF00753 Metallo-beta-lactamase superfamily E3399_RS04255 PF14863 Alkyl sulfatase dimerisation E3399_RS04260 PF00924 Mechanosensitive ion channel E3399_RS04260 PF12795 Mechanosensitive ion channel porin domain E3399_RS04260 PF12794 Mechanosensitive ion channel inner membrane domain 1 E3399_RS04265 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E3399_RS04270 PF01926 50S ribosome-binding GTPase E3399_RS04275 PF13280 WYL domain E3399_RS04275 PF08220 DeoR-like helix-turn-helix domain E3399_RS04295 PF06006 Bacterial protein of unknown function (DUF905) E3399_RS04300 PF06067 Domain of unknown function (DUF932) E3399_RS04305 PF03230 Antirestriction protein E3399_RS04310 PF04002 RadC-like JAB domain E3399_RS04315 PF06174 Protein of unknown function (DUF987) E3399_RS04320 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E3399_RS04325 PF06755 CbtA_toxin of type IV toxin-antitoxin system E3399_RS04345 PF13505 Outer membrane protein beta-barrel domain E3399_RS04355 PF00419 Fimbrial protein E3399_RS04360 PF13953 PapC C-terminal domain E3399_RS04360 PF13954 PapC N-terminal domain E3399_RS04360 PF00577 Outer membrane usher protein E3399_RS04365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS04365 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS04385 PF03824 High-affinity nickel-transport protein E3399_RS04390 PF02583 Metal-sensitive transcriptional repressor E3399_RS04395 PF03222 Tryptophan/tyrosine permease family E3399_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS04405 PF03466 LysR substrate binding domain E3399_RS04410 PF02803 Thiolase, C-terminal domain E3399_RS04410 PF00108 Thiolase, N-terminal domain E3399_RS04415 PF04962 KduI/IolB family E3399_RS04425 PF00083 Sugar (and other) transporter E3399_RS04430 PF01177 Asp/Glu/Hydantoin racemase E3399_RS04435 PF03466 LysR substrate binding domain E3399_RS04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS04440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3399_RS04440 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E3399_RS04445 PF00356 Bacterial regulatory proteins, lacI family E3399_RS04450 PF00356 Bacterial regulatory proteins, lacI family E3399_RS04455 PF01553 Acyltransferase E3399_RS04455 PF00501 AMP-binding enzyme E3399_RS04460 PF07690 Major Facilitator Superfamily E3399_RS04465 PF00248 Aldo/keto reductase family E3399_RS04470 PF06004 Bacterial protein of unknown function (DUF903) E3399_RS04475 PF03741 Integral membrane protein TerC family E3399_RS04480 PF02976 DNA mismatch repair enzyme MutH E3399_RS04485 PF00293 NUDIX domain E3399_RS04490 PF05524 PEP-utilising enzyme, N-terminal E3399_RS04490 PF00391 PEP-utilising enzyme, mobile domain E3399_RS04490 PF02896 PEP-utilising enzyme, TIM barrel domain E3399_RS04490 PF01590 GAF domain E3399_RS04500 PF01790 Prolipoprotein diacylglyceryl transferase E3399_RS04505 PF00303 Thymidylate synthase E3399_RS04510 PF07963 Prokaryotic N-terminal methylation motif E3399_RS04515 PF07963 Prokaryotic N-terminal methylation motif E3399_RS04520 PF10713 Protein of unknown function (DUF2509) E3399_RS04525 PF07963 Prokaryotic N-terminal methylation motif E3399_RS04525 PF12528 Type II secretion prepilin peptidase dependent protein C E3399_RS04530 PF17946 RecC C-terminal domain E3399_RS04535 PF00675 Insulinase (Peptidase family M16) E3399_RS04535 PF05193 Peptidase M16 inactive domain E3399_RS04535 PF16187 Middle or third domain of peptidase_M16 E3399_RS04540 PF13361 UvrD-like helicase C-terminal domain E3399_RS04540 PF00580 UvrD/REP helicase N-terminal domain E3399_RS04540 PF12705 PD-(D/E)XK nuclease superfamily E3399_RS04545 PF13538 UvrD-like helicase C-terminal domain E3399_RS04550 PF00583 Acetyltransferase (GNAT) family E3399_RS04550 PF00696 Amino acid kinase family E3399_RS04555 PF11741 AMIN domain E3399_RS04555 PF01520 N-acetylmuramoyl-L-alanine amidase E3399_RS04570 PF03562 MltA specific insert domain E3399_RS04570 PF06725 3D domain E3399_RS04575 PF00899 ThiF family E3399_RS04580 PF00892 EamA-like transporter family E3399_RS04585 PF02657 Fe-S metabolism associated domain E3399_RS04590 PF00266 Aminotransferase class-V E3399_RS04595 PF06004 Bacterial protein of unknown function (DUF903) E3399_RS04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS04600 PF03466 LysR substrate binding domain E3399_RS04605 PF04241 Protein of unknown function (DUF423) E3399_RS04610 PF01728 FtsJ-like methyltransferase E3399_RS04610 PF18125 RlmM ferredoxin-like domain E3399_RS04615 PF08220 DeoR-like helix-turn-helix domain E3399_RS04615 PF00455 DeoR C terminal sensor domain E3399_RS04620 PF05025 RbsD / FucU transport protein family E3399_RS04625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS04625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS04630 PF07882 L-fucose isomerase, second N-terminal domain E3399_RS04630 PF07881 L-fucose isomerase, first N-terminal domain E3399_RS04630 PF02952 L-fucose isomerase, C-terminal domain E3399_RS04635 PF07690 Major Facilitator Superfamily E3399_RS04640 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS04645 PF00465 Iron-containing alcohol dehydrogenase E3399_RS04650 PF01367 5'-3' exonuclease, C-terminal SAM fold E3399_RS04650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3399_RS04655 PF03313 Serine dehydratase alpha chain E3399_RS04655 PF03315 Serine dehydratase beta chain E3399_RS04665 PF11892 Domain of unknown function (DUF3412) E3399_RS04665 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E3399_RS04665 PF03641 Possible lysine decarboxylase E3399_RS04670 PF14489 QueF-like protein E3399_RS04670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E3399_RS04675 PF07348 Syd protein (SUKH-2) E3399_RS04685 PF04287 tRNA pseudouridine synthase C E3399_RS04690 PF00849 RNA pseudouridylate synthase E3399_RS04695 PF00258 Flavodoxin E3399_RS04705 PF07690 Major Facilitator Superfamily E3399_RS04710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS04710 PF13378 Enolase C-terminal domain-like E3399_RS04715 PF13378 Enolase C-terminal domain-like E3399_RS04720 PF02595 Glycerate kinase family E3399_RS04725 PF00672 HAMP domain E3399_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS04725 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS04725 PF01627 Hpt domain E3399_RS04725 PF00072 Response regulator receiver domain E3399_RS04725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E3399_RS04730 PF01938 TRAM domain E3399_RS04730 PF05958 tRNA (Uracil-5-)-methyltransferase E3399_RS04735 PF04607 Region found in RelA / SpoT proteins E3399_RS04735 PF02824 TGS domain E3399_RS04735 PF13291 ACT domain E3399_RS04740 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH E3399_RS04760 PF00419 Fimbrial protein E3399_RS04770 PF00419 Fimbrial protein E3399_RS04775 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS04775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS04780 PF00577 Outer membrane usher protein E3399_RS04780 PF13953 PapC C-terminal domain E3399_RS04780 PF13954 PapC N-terminal domain E3399_RS04785 PF00419 Fimbrial protein E3399_RS04790 PF03819 MazG nucleotide pyrophosphohydrolase domain E3399_RS04795 PF00117 Glutamine amidotransferase class-I E3399_RS04795 PF06418 CTP synthase N-terminus E3399_RS04800 PF03952 Enolase, N-terminal domain E3399_RS04800 PF00113 Enolase, C-terminal TIM barrel domain E3399_RS04805 PF04055 Radical SAM superfamily E3399_RS04810 PF03099 Biotin/lipoate A/B protein ligase family E3399_RS04810 PF12706 Beta-lactamase superfamily domain E3399_RS04815 PF01242 6-pyruvoyl tetrahydropterin synthase E3399_RS04820 PF00667 FAD binding domain E3399_RS04820 PF00258 Flavodoxin E3399_RS04820 PF00175 Oxidoreductase NAD-binding domain E3399_RS04825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3399_RS04825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3399_RS04830 PF01507 Phosphoadenosine phosphosulfate reductase family E3399_RS04835 PF11047 Salmonella outer protein D E3399_RS04840 PF18019 HD domain E3399_RS04840 PF00271 Helicase conserved C-terminal domain E3399_RS04840 PF00270 DEAD/DEAH box helicase E3399_RS04845 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) E3399_RS04855 PF09344 CT1975-like protein E3399_RS04860 PF09704 CRISPR-associated protein (Cas_Cas5) E3399_RS04870 PF01867 CRISPR associated protein Cas1 E3399_RS04875 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) E3399_RS04880 PF04389 Peptidase family M28 E3399_RS04885 PF01507 Phosphoadenosine phosphosulfate reductase family E3399_RS04890 PF00009 Elongation factor Tu GTP binding domain E3399_RS04900 PF12084 Protein of unknown function (DUF3561) E3399_RS04905 PF04977 Septum formation initiator E3399_RS04910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E3399_RS04915 PF02542 YgbB family E3399_RS04920 PF01142 tRNA pseudouridine synthase D (TruD) E3399_RS04925 PF01975 Survival protein SurE E3399_RS04935 PF01551 Peptidase family M23 E3399_RS04935 PF01476 LysM domain E3399_RS04940 PF04539 Sigma-70 region 3 E3399_RS04940 PF04545 Sigma-70, region 4 E3399_RS04940 PF04542 Sigma-70 region 2 E3399_RS04940 PF00140 Sigma-70 factor, region 1.2 E3399_RS04950 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E3399_RS04955 PF02441 Flavoprotein E3399_RS04960 PF01047 MarR family E3399_RS04965 PF08220 DeoR-like helix-turn-helix domain E3399_RS04965 PF00455 DeoR C terminal sensor domain E3399_RS04970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3399_RS04970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3399_RS04975 PF07005 Sugar-binding N-terminal domain E3399_RS04975 PF17042 Nucleotide-binding C-terminal domain E3399_RS04980 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS04985 PF01261 Xylose isomerase-like TIM barrel E3399_RS04990 PF01370 NAD dependent epimerase/dehydratase family E3399_RS04995 PF02447 GntP family permease E3399_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS05000 PF03466 LysR substrate binding domain E3399_RS05005 PF07690 Major Facilitator Superfamily E3399_RS05015 PF00488 MutS domain V E3399_RS05015 PF05190 MutS family domain IV E3399_RS05015 PF05192 MutS domain III E3399_RS05015 PF05188 MutS domain II E3399_RS05015 PF01624 MutS domain I E3399_RS05040 PF00149 Calcineurin-like phosphoesterase E3399_RS05080 PF04741 InvH outer membrane lipoprotein E3399_RS05085 PF12833 Helix-turn-helix domain E3399_RS05090 PF03958 Bacterial type II/III secretion system short domain E3399_RS05090 PF00263 Bacterial type II and III secretion system protein E3399_RS05095 PF07201 HrpJ-like domain E3399_RS05100 PF00771 FHIPEP family E3399_RS05105 PF03519 Invasion protein B family E3399_RS05110 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3399_RS05110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS05110 PF18269 T3SS EscN ATPase C-terminal domain E3399_RS05115 PF02090 Salmonella surface presentation of antigen gene type M protein E3399_RS05120 PF02510 Surface presentation of antigens protein E3399_RS05125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3399_RS05130 PF00813 FliP family E3399_RS05135 PF01313 Bacterial export proteins, family 3 E3399_RS05140 PF01311 Bacterial export proteins, family 1 E3399_RS05145 PF01312 FlhB HrpN YscU SpaS Family E3399_RS05150 PF07720 Tetratricopeptide repeat E3399_RS05155 PF16535 Type III cell invasion protein SipB E3399_RS05155 PF04888 Secretion system effector C (SseC) like family E3399_RS05160 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) E3399_RS05165 PF06511 Type III secretion systems tip complex components E3399_RS05170 PF09052 SipA N-terminal domain E3399_RS05175 PF00550 Phosphopantetheine attachment site E3399_RS05185 PF05932 Tir chaperone protein (CesT) family E3399_RS05190 PF03545 Yersinia virulence determinant (YopE) E3399_RS05190 PF00102 Protein-tyrosine phosphatase E3399_RS05190 PF09119 SicP binding E3399_RS05195 PF01464 Transglycosylase SLT domain E3399_RS05200 PF00486 Transcriptional regulatory protein, C terminal E3399_RS05205 PF12833 Helix-turn-helix domain E3399_RS05210 PF09480 Type III secretion system protein PrgH-EprH (PrgH) E3399_RS05215 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF E3399_RS05225 PF01514 Secretory protein of YscJ/FliF family E3399_RS05230 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) E3399_RS05245 PF12833 Helix-turn-helix domain E3399_RS05255 PF03421 YopJ Serine/Threonine acetyltransferase E3399_RS05260 PF00950 ABC 3 transport family E3399_RS05265 PF00950 ABC 3 transport family E3399_RS05270 PF00005 ABC transporter E3399_RS05275 PF01297 Zinc-uptake complex component A periplasmic E3399_RS05280 PF11756 Nitrous oxide-stimulated promoter E3399_RS05285 PF00158 Sigma-54 interaction domain E3399_RS05285 PF02954 Bacterial regulatory protein, Fis family E3399_RS05285 PF01590 GAF domain E3399_RS05290 PF00586 AIR synthase related protein, N-terminal domain E3399_RS05290 PF02769 AIR synthase related protein, C-terminal domain E3399_RS05295 PF01924 Hydrogenase formation hypA family E3399_RS05300 PF01455 HupF/HypC family E3399_RS05305 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3399_RS05310 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E3399_RS05315 PF11046 Transcriptional repressor of hyc and hyp operons E3399_RS05320 PF13247 4Fe-4S dicluster domain E3399_RS05325 PF00361 Proton-conducting membrane transporter E3399_RS05330 PF00146 NADH dehydrogenase E3399_RS05335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E3399_RS05335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E3399_RS05335 PF00374 Nickel-dependent hydrogenase E3399_RS05340 PF12838 4Fe-4S dicluster domain E3399_RS05345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3399_RS05350 PF07450 Formate hydrogenlyase maturation protein HycH E3399_RS05355 PF01750 Hydrogenase maturation protease E3399_RS05365 PF12800 4Fe-4S binding domain E3399_RS05365 PF13247 4Fe-4S dicluster domain E3399_RS05370 PF00708 Acylphosphatase E3399_RS05370 PF17788 HypF Kae1-like domain E3399_RS05370 PF01300 Telomere recombination E3399_RS05370 PF07503 HypF finger E3399_RS05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS05375 PF18113 Rubredoxin binding C-terminal domain E3399_RS05380 PF00301 Rubredoxin E3399_RS05380 PF00753 Metallo-beta-lactamase superfamily E3399_RS05380 PF00258 Flavodoxin E3399_RS05385 PF01590 GAF domain E3399_RS05385 PF00158 Sigma-54 interaction domain E3399_RS05390 PF01380 SIS domain E3399_RS05390 PF00571 CBS domain E3399_RS05395 PF08220 DeoR-like helix-turn-helix domain E3399_RS05395 PF00455 DeoR C terminal sensor domain E3399_RS05400 PF06923 Glucitol operon activator protein (GutM) E3399_RS05405 PF00106 short chain dehydrogenase E3399_RS05410 PF03829 PTS system glucitol/sorbitol-specific IIA component E3399_RS05415 PF07663 Sorbitol phosphotransferase enzyme II C-terminus E3399_RS05415 PF03612 Sorbitol phosphotransferase enzyme II N-terminus E3399_RS05420 PF03608 PTS system enzyme II sorbitol-specific factor E3399_RS05425 PF13406 Transglycosylase SLT domain E3399_RS05435 PF02464 Competence-damaged protein E3399_RS05440 PF00154 recA bacterial DNA recombination protein E3399_RS05445 PF02631 RecX family E3399_RS05455 PF02272 DHHA1 domain E3399_RS05455 PF01411 tRNA synthetases class II (A) E3399_RS05455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3399_RS05460 PF02599 Global regulator protein family E3399_RS05490 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS05495 PF09335 SNARE associated Golgi protein E3399_RS05500 PF04262 Glutamate-cysteine ligase E3399_RS05505 PF02664 S-Ribosylhomocysteinase (LuxS) E3399_RS05515 PF07690 Major Facilitator Superfamily E3399_RS05520 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS05520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS05525 PF01047 MarR family E3399_RS05530 PF07690 Major Facilitator Superfamily E3399_RS05535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3399_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS05545 PF00571 CBS domain E3399_RS05545 PF00005 ABC transporter E3399_RS05550 PF00268 Ribonucleotide reductase, small chain E3399_RS05555 PF08343 Ribonucleotide reductase N-terminal E3399_RS05555 PF02867 Ribonucleotide reductase, barrel domain E3399_RS05555 PF00317 Ribonucleotide reductase, all-alpha domain E3399_RS05560 PF07972 NrdI Flavodoxin like E3399_RS05565 PF00462 Glutaredoxin E3399_RS05575 PF02627 Carboxymuconolactone decarboxylase family E3399_RS05580 PF00155 Aminotransferase class I and II E3399_RS05580 PF00392 Bacterial regulatory proteins, gntR family E3399_RS05585 PF05957 Bacterial protein of unknown function (DUF883) E3399_RS05590 PF09400 Protein of unknown function (DUF2002) E3399_RS05595 PF06610 L-alanine exporter E3399_RS05605 PF00816 H-NS histone family E3399_RS05615 PF11127 Protein of unknown function (DUF2892) E3399_RS05615 PF00581 Rhodanese-like domain E3399_RS05620 PF01022 Bacterial regulatory protein, arsR family E3399_RS05625 PF01679 Proteolipid membrane potential modulator E3399_RS05635 PF04972 BON domain E3399_RS05635 PF01476 LysM domain E3399_RS05640 PF00392 Bacterial regulatory proteins, gntR family E3399_RS05640 PF07729 FCD domain E3399_RS05645 PF00324 Amino acid permease E3399_RS05650 PF00202 Aminotransferase class-III E3399_RS05655 PF00171 Aldehyde dehydrogenase family E3399_RS05660 PF01266 FAD dependent oxidoreductase E3399_RS05665 PF08943 CsiD E3399_RS05670 PF01970 Tripartite tricarboxylate transporter TctA family E3399_RS05685 PF00072 Response regulator receiver domain E3399_RS05685 PF00486 Transcriptional regulatory protein, C terminal E3399_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS05690 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS05695 PF03824 High-affinity nickel-transport protein E3399_RS05710 PF04393 Protein of unknown function (DUF535) E3399_RS05715 PF00805 Pentapeptide repeats (8 copies) E3399_RS05725 PF00593 TonB dependent receptor E3399_RS05725 PF07715 TonB-dependent Receptor Plug Domain E3399_RS05730 PF00756 Putative esterase E3399_RS05740 PF00005 ABC transporter E3399_RS05740 PF00664 ABC transporter transmembrane region E3399_RS05745 PF06722 Protein of unknown function (DUF1205) E3399_RS05760 PF08884 Flagellin D3 domain E3399_RS05760 PF00669 Bacterial flagellin N-terminal helical region E3399_RS05760 PF00700 Bacterial flagellin C-terminal helical region E3399_RS05765 PF03614 Repressor of phase-1 flagellin E3399_RS05805 PF00589 Phage integrase family E3399_RS05805 PF13356 Arm DNA-binding domain E3399_RS05815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS05815 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS05820 PF00005 ABC transporter E3399_RS05820 PF00664 ABC transporter transmembrane region E3399_RS05835 PF01668 SmpB protein E3399_RS05840 PF03364 Polyketide cyclase / dehydrase and lipid transport E3399_RS05845 PF03658 RnfH family Ubiquitin E3399_RS05850 PF04355 SmpA / OmlA family E3399_RS05855 PF02463 RecF/RecN/SMC N terminal domain E3399_RS05860 PF01513 ATP-NAD kinase E3399_RS05865 PF01025 GrpE E3399_RS05875 PF03471 Transporter associated domain E3399_RS05875 PF01595 Cyclin M transmembrane N-terminal domain E3399_RS05875 PF00571 CBS domain E3399_RS05880 PF01578 Cytochrome C assembly protein E3399_RS05885 PF02978 Signal peptide binding domain E3399_RS05885 PF00448 SRP54-type protein, GTPase domain E3399_RS05885 PF02881 SRP54-type protein, helical bundle domain E3399_RS05890 PF00886 Ribosomal protein S16 E3399_RS05895 PF05239 PRC-barrel domain E3399_RS05895 PF01782 RimM N-terminal domain E3399_RS05900 PF01746 tRNA (Guanine-1)-methyltransferase E3399_RS05905 PF01245 Ribosomal protein L19 E3399_RS05910 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS05910 PF17152 Periplasmic sensor domain E3399_RS05915 PF13689 YfiR/HmsC-like E3399_RS05920 PF00793 DAHP synthetase I family E3399_RS05925 PF01817 Chorismate mutase type II E3399_RS05925 PF02153 Prephenate dehydrogenase E3399_RS05930 PF08450 SMP-30/Gluconolactonase/LRE-like region E3399_RS05935 PF00800 Prephenate dehydratase E3399_RS05935 PF01817 Chorismate mutase type II E3399_RS05945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E3399_RS05955 PF13525 Outer membrane lipoprotein E3399_RS05960 PF01479 S4 domain E3399_RS05960 PF00849 RNA pseudouridylate synthase E3399_RS05965 PF02578 Multi-copper polyphenol oxidoreductase laccase E3399_RS05970 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS05970 PF10431 C-terminal, D2-small domain, of ClpB protein E3399_RS05970 PF02861 Clp amino terminal domain, pathogenicity island component E3399_RS05970 PF17871 AAA lid domain E3399_RS05970 PF07724 AAA domain (Cdc48 subfamily) E3399_RS06000 PF00083 Sugar (and other) transporter E3399_RS06005 PF10043 Predicted periplasmic lipoprotein (DUF2279) E3399_RS06010 PF13091 PLD-like domain E3399_RS06015 PF13380 CoA binding domain E3399_RS06015 PF13607 Succinyl-CoA ligase like flavodoxin domain E3399_RS06015 PF00583 Acetyltransferase (GNAT) family E3399_RS06020 PF03942 DTW domain E3399_RS06025 PF00085 Thioredoxin E3399_RS06030 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3399_RS06030 PF00588 SpoU rRNA Methylase family E3399_RS06035 PF03167 Uracil DNA glycosylase superfamily E3399_RS06040 PF01228 Glycine radical E3399_RS06045 PF01810 LysE type translocator E3399_RS06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS06050 PF03466 LysR substrate binding domain E3399_RS06055 PF00270 DEAD/DEAH box helicase E3399_RS06055 PF00271 Helicase conserved C-terminal domain E3399_RS06060 PF05175 Methyltransferase small domain E3399_RS06065 PF00890 FAD binding domain E3399_RS06065 PF02910 Fumarate reductase flavoprotein C-term E3399_RS06080 PF08281 Sigma-70, region 4 E3399_RS06080 PF04542 Sigma-70 region 2 E3399_RS06085 PF03872 Anti sigma-E protein RseA, N-terminal domain E3399_RS06085 PF03873 Anti sigma-E protein RseA, C-terminal domain E3399_RS06090 PF03888 MucB/RseB N-terminal domain E3399_RS06090 PF17188 MucB/RseB C-terminal domain E3399_RS06100 PF03144 Elongation factor Tu domain 2 E3399_RS06100 PF00009 Elongation factor Tu GTP binding domain E3399_RS06100 PF00679 Elongation factor G C-terminus E3399_RS06100 PF06421 GTP-binding protein LepA C-terminus E3399_RS06105 PF10502 Signal peptidase, peptidase S26 E3399_RS06110 PF14622 Ribonuclease-III-like E3399_RS06110 PF00035 Double-stranded RNA binding motif E3399_RS06115 PF01926 50S ribosome-binding GTPase E3399_RS06115 PF07650 KH domain E3399_RS06120 PF02565 Recombination protein O C terminal E3399_RS06120 PF11967 Recombination protein O N terminal E3399_RS06125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E3399_RS06130 PF01648 4'-phosphopantetheinyl transferase superfamily E3399_RS06135 PF12838 4Fe-4S dicluster domain E3399_RS06140 PF03466 LysR substrate binding domain E3399_RS06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS06145 PF07690 Major Facilitator Superfamily E3399_RS06150 PF08546 Ketopantoate reductase PanE/ApbA C terminal E3399_RS06150 PF02558 Ketopantoate reductase PanE/ApbA E3399_RS06155 PF01418 Helix-turn-helix domain, rpiR family E3399_RS06155 PF01380 SIS domain E3399_RS06160 PF01380 SIS domain E3399_RS06165 PF02378 Phosphotransferase system, EIIC E3399_RS06165 PF00367 phosphotransferase system, EIIB E3399_RS06175 PF14437 MafB19-like deaminase E3399_RS06180 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS06180 PF01464 Transglycosylase SLT domain E3399_RS06190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E3399_RS06190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E3399_RS06190 PF02769 AIR synthase related protein, C-terminal domain E3399_RS06195 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS06200 PF13942 YfhG lipoprotein E3399_RS06205 PF00072 Response regulator receiver domain E3399_RS06205 PF00158 Sigma-54 interaction domain E3399_RS06210 PF00543 Nitrogen regulatory protein P-II E3399_RS06215 PF00854 POT family E3399_RS06220 PF01276 Orn/Lys/Arg decarboxylase, major domain E3399_RS06220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3399_RS06220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3399_RS06225 PF13520 Amino acid permease E3399_RS06230 PF00486 Transcriptional regulatory protein, C terminal E3399_RS06230 PF18500 CadC C-terminal domain 1 E3399_RS06235 PF00042 Globin E3399_RS06235 PF00970 Oxidoreductase FAD-binding domain E3399_RS06235 PF00175 Oxidoreductase NAD-binding domain E3399_RS06240 PF00464 Serine hydroxymethyltransferase E3399_RS06245 PF12832 MFS_1 like family E3399_RS06250 PF00874 PRD domain E3399_RS06260 PF03824 High-affinity nickel-transport protein E3399_RS06265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3399_RS06265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3399_RS06265 PF13187 4Fe-4S dicluster domain E3399_RS06270 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E3399_RS06270 PF00175 Oxidoreductase NAD-binding domain E3399_RS06275 PF17179 4Fe-4S dicluster domain E3399_RS06280 PF12146 Serine aminopeptidase, S33 E3399_RS06285 PF00459 Inositol monophosphatase family E3399_RS06290 PF00588 SpoU rRNA Methylase family E3399_RS06295 PF02082 Transcriptional regulator E3399_RS06300 PF00266 Aminotransferase class-V E3399_RS06305 PF01592 NifU-like N terminal domain E3399_RS06310 PF01521 Iron-sulphur cluster biosynthesis E3399_RS06315 PF07743 HSCB C-terminal oligomerisation domain E3399_RS06320 PF00012 Hsp70 protein E3399_RS06325 PF00111 2Fe-2S iron-sulfur cluster binding domain E3399_RS06330 PF04384 Iron-sulphur cluster assembly E3399_RS06340 PF12404 Peptidase E3399_RS06340 PF00883 Cytosol aminopeptidase family, catalytic domain E3399_RS06345 PF07179 SseB protein N-terminal domain E3399_RS06345 PF14581 SseB protein C-terminal domain E3399_RS06355 PF00581 Rhodanese-like domain E3399_RS06360 PF01835 MG2 domain E3399_RS06360 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E3399_RS06360 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E3399_RS06360 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E3399_RS06360 PF07703 Alpha-2-macroglobulin bait region domain E3399_RS06360 PF00207 Alpha-2-macroglobulin family E3399_RS06360 PF17962 Bacterial macroglobulin domain 6 E3399_RS06360 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E3399_RS06360 PF07678 A-macroglobulin TED domain E3399_RS06365 PF06832 Penicillin-Binding Protein C-terminus Family E3399_RS06365 PF00905 Penicillin binding protein transpeptidase domain E3399_RS06365 PF00912 Transglycosylase E3399_RS06370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS06370 PF00384 Molybdopterin oxidoreductase E3399_RS06370 PF01568 Molydopterin dinucleotide binding domain E3399_RS06375 PF12800 4Fe-4S binding domain E3399_RS06375 PF13247 4Fe-4S dicluster domain E3399_RS06390 PF00334 Nucleoside diphosphate kinase E3399_RS06395 PF04055 Radical SAM superfamily E3399_RS06400 PF13464 Domain of unknown function (DUF4115) E3399_RS06405 PF04551 GcpE protein E3399_RS06410 PF03129 Anticodon binding domain E3399_RS06410 PF13393 Histidyl-tRNA synthetase E3399_RS06415 PF09976 Tetratricopeptide repeat-like domain E3399_RS06420 PF13360 PQQ-like domain E3399_RS06425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E3399_RS06425 PF01926 50S ribosome-binding GTPase E3399_RS06430 PF07191 zinc-ribbons E3399_RS06435 PF01476 LysM domain E3399_RS06435 PF02369 Bacterial Ig-like domain (group 1) E3399_RS06435 PF02368 Bacterial Ig-like domain (group 2) E3399_RS06435 PF11924 Inverse autotransporter, beta-domain E3399_RS06435 PF07979 Intimin C-type lectin domain E3399_RS06460 PF03797 Autotransporter beta-domain E3399_RS06465 PF13742 OB-fold nucleic acid binding domain E3399_RS06465 PF02601 Exonuclease VII, large subunit E3399_RS06470 PF00478 IMP dehydrogenase / GMP reductase domain E3399_RS06470 PF00571 CBS domain E3399_RS06475 PF00117 Glutamine amidotransferase class-I E3399_RS06475 PF00958 GMP synthase C terminal domain E3399_RS06475 PF02540 NAD synthase E3399_RS06495 PF11119 Protein of unknown function (DUF2633) E3399_RS06505 PF00563 EAL domain E3399_RS06505 PF05231 MASE1 E3399_RS06510 PF02541 Ppx/GppA phosphatase family E3399_RS06515 PF02503 Polyphosphate kinase middle domain E3399_RS06515 PF13090 Polyphosphate kinase C-terminal domain 2 E3399_RS06515 PF17941 Polyphosphate kinase C-terminal domain 1 E3399_RS06515 PF13089 Polyphosphate kinase N-terminal domain E3399_RS06520 PF00551 Formyl transferase E3399_RS06525 PF00586 AIR synthase related protein, N-terminal domain E3399_RS06525 PF02769 AIR synthase related protein, C-terminal domain E3399_RS06535 PF00860 Permease family E3399_RS06540 PF00308 Bacterial dnaA protein E3399_RS06545 PF03960 ArsC family E3399_RS06550 PF01435 Peptidase family M48 E3399_RS06555 PF01594 AI-2E family transporter E3399_RS06560 PF05651 Putative sugar diacid recognition E3399_RS06560 PF17853 GGDEF-like domain E3399_RS06560 PF13556 PucR C-terminal helix-turn-helix domain E3399_RS06565 PF02447 GntP family permease E3399_RS06570 PF02595 Glycerate kinase family E3399_RS06575 PF00578 AhpC/TSA family E3399_RS06580 PF01842 ACT domain E3399_RS06585 PF00701 Dihydrodipicolinate synthetase family E3399_RS06590 PF06804 NlpB/DapX lipoprotein E3399_RS06595 PF01259 SAICAR synthetase E3399_RS06600 PF04228 Putative neutral zinc metallopeptidase E3399_RS06605 PF08351 Domain of unknown function (DUF1726) E3399_RS06605 PF13718 GNAT acetyltransferase 2 E3399_RS06605 PF05127 Helicase E3399_RS06605 PF17176 tRNA-binding domain E3399_RS06610 PF13980 Uncharacterised protein family (UPF0370) E3399_RS06615 PF07687 Peptidase dimerisation domain E3399_RS06615 PF01546 Peptidase family M20/M25/M40 E3399_RS06620 PF03960 ArsC family E3399_RS06630 PF00873 AcrB/AcrD/AcrF family E3399_RS06635 PF00672 HAMP domain E3399_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS06635 PF07730 Histidine kinase E3399_RS06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E3399_RS06640 PF13247 4Fe-4S dicluster domain E3399_RS06640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3399_RS06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS06645 PF00144 Beta-lactamase E3399_RS06650 PF00293 NUDIX domain E3399_RS06655 PF06674 Protein of unknown function (DUF1176) E3399_RS06665 PF02779 Transketolase, pyrimidine binding domain E3399_RS06665 PF02780 Transketolase, C-terminal domain E3399_RS06665 PF00456 Transketolase, thiamine diphosphate binding domain E3399_RS06670 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3399_RS06675 PF00390 Malic enzyme, N-terminal domain E3399_RS06675 PF03949 Malic enzyme, NAD binding domain E3399_RS06675 PF01515 Phosphate acetyl/butaryl transferase E3399_RS06680 PF00936 BMC domain E3399_RS06685 PF10662 Ethanolamine utilisation - propanediol utilisation E3399_RS06690 PF06249 Ethanolamine utilisation protein EutQ E3399_RS06695 PF01923 Cobalamin adenosyltransferase E3399_RS06700 PF01515 Phosphate acetyl/butaryl transferase E3399_RS06705 PF00936 BMC domain E3399_RS06710 PF03319 Ethanolamine utilisation protein EutN/carboxysome E3399_RS06715 PF00171 Aldehyde dehydrogenase family E3399_RS06725 PF00465 Iron-containing alcohol dehydrogenase E3399_RS06730 PF04346 Ethanolamine utilisation protein, EutH E3399_RS06735 PF06277 Ethanolamine utilisation protein EutA E3399_RS06740 PF06751 Ethanolamine ammonia lyase large subunit (EutB) E3399_RS06745 PF05985 Ethanolamine ammonia-lyase light chain (EutC) E3399_RS06750 PF00936 BMC domain E3399_RS06755 PF16365 Ethanolamine utilization protein EutK C-terminus E3399_RS06755 PF00936 BMC domain E3399_RS06760 PF12833 Helix-turn-helix domain E3399_RS06765 PF09234 Domain of unknown function (DUF1963) E3399_RS06775 PF01218 Coproporphyrinogen III oxidase E3399_RS06780 PF01520 N-acetylmuramoyl-L-alanine amidase E3399_RS06785 PF00583 Acetyltransferase (GNAT) family E3399_RS06790 PF11143 Protein of unknown function (DUF2919) E3399_RS06795 PF06572 Protein of unknown function (DUF1131) E3399_RS06800 PF04261 Dyp-type peroxidase family E3399_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS06825 PF00005 ABC transporter E3399_RS06830 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS06835 PF00912 Transglycosylase E3399_RS06840 PF17263 Family of unknown function (DUF5329) E3399_RS06845 PF00117 Glutamine amidotransferase class-I E3399_RS06850 PF00155 Aminotransferase class I and II E3399_RS06850 PF00392 Bacterial regulatory proteins, gntR family E3399_RS06855 PF08543 Phosphomethylpyrimidine kinase E3399_RS06865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3399_RS06870 PF02896 PEP-utilising enzyme, TIM barrel domain E3399_RS06870 PF00391 PEP-utilising enzyme, mobile domain E3399_RS06870 PF05524 PEP-utilising enzyme, N-terminal E3399_RS06875 PF00381 PTS HPr component phosphorylation site E3399_RS06880 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS06890 PF04354 ZipA, C-terminal FtsZ-binding domain E3399_RS06895 PF00533 BRCA1 C Terminus (BRCT) domain E3399_RS06895 PF12826 Helix-hairpin-helix motif E3399_RS06895 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E3399_RS06895 PF03120 NAD-dependent DNA ligase OB-fold domain E3399_RS06895 PF01653 NAD-dependent DNA ligase adenylation domain E3399_RS06900 PF12843 Putative quorum-sensing-regulated virulence factor E3399_RS06905 PF13593 SBF-like CPA transporter family (DUF4137) E3399_RS06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS06910 PF03466 LysR substrate binding domain E3399_RS06915 PF03502 Nucleoside-specific channel-forming protein, Tsx E3399_RS06920 PF01048 Phosphorylase superfamily E3399_RS06925 PF03825 Nucleoside H+ symporter E3399_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS06935 PF03466 LysR substrate binding domain E3399_RS06955 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3399_RS06960 PF07037 Putative transcription regulator (DUF1323) E3399_RS06965 PF07037 Putative transcription regulator (DUF1323) E3399_RS06980 PF05231 MASE1 E3399_RS06980 PF00563 EAL domain E3399_RS06985 PF01773 Na+ dependent nucleoside transporter N-terminus E3399_RS06985 PF07662 Na+ dependent nucleoside transporter C-terminus E3399_RS06985 PF07670 Nucleoside recognition E3399_RS06990 PF01566 Natural resistance-associated macrophage protein E3399_RS06995 PF10697 Protein of unknown function (DUF2502) E3399_RS07000 PF00248 Aldo/keto reductase family E3399_RS07005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS07005 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS07005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS07010 PF00654 Voltage gated chloride channel E3399_RS07015 PF02685 Glucokinase E3399_RS07020 PF00155 Aminotransferase class I and II E3399_RS07030 PF03279 Bacterial lipid A biosynthesis acyltransferase E3399_RS07035 PF10810 Protein of unknown function (DUF2545) E3399_RS07040 PF07690 Major Facilitator Superfamily E3399_RS07050 PF00672 HAMP domain E3399_RS07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS07050 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS07055 PF02954 Bacterial regulatory protein, Fis family E3399_RS07055 PF00072 Response regulator receiver domain E3399_RS07055 PF14532 Sigma-54 interaction domain E3399_RS07060 PF01278 Omptin family E3399_RS07070 PF01226 Formate/nitrite transporter E3399_RS07075 PF04333 MlaA lipoprotein E3399_RS07080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E3399_RS07085 PF04175 Protein of unknown function (DUF406) E3399_RS07090 PF00108 Thiolase, N-terminal domain E3399_RS07090 PF02803 Thiolase, C-terminal domain E3399_RS07095 PF00378 Enoyl-CoA hydratase/isomerase E3399_RS07095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3399_RS07095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3399_RS07100 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS07105 PF01713 Smr domain E3399_RS07110 PF05175 Methyltransferase small domain E3399_RS07115 PF01264 Chorismate synthase E3399_RS07120 PF03411 Penicillin-insensitive murein endopeptidase E3399_RS07125 PF01925 Sulfite exporter TauE/SafE E3399_RS07130 PF04315 Elongation factor P hydroxylase E3399_RS07135 PF08891 YfcL protein E3399_RS07140 PF01266 FAD dependent oxidoreductase E3399_RS07140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E3399_RS07145 PF00109 Beta-ketoacyl synthase, N-terminal domain E3399_RS07145 PF02801 Beta-ketoacyl synthase, C-terminal domain E3399_RS07150 PF02517 CPBP intramembrane metalloprotease E3399_RS07165 PF13693 Winged helix-turn-helix DNA-binding E3399_RS07175 PF07690 Major Facilitator Superfamily E3399_RS07185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3399_RS07185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3399_RS07185 PF11890 Domain of unknown function (DUF3410) E3399_RS07190 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3399_RS07190 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3399_RS07195 PF01416 tRNA pseudouridine synthase E3399_RS07200 PF09335 SNARE associated Golgi protein E3399_RS07205 PF17848 Acetyl-coA carboxylase zinc finger domain E3399_RS07205 PF01039 Carboxyl transferase domain E3399_RS07210 PF02875 Mur ligase family, glutamate ligase domain E3399_RS07210 PF08245 Mur ligase middle domain E3399_RS07215 PF05036 Sporulation related domain E3399_RS07220 PF02674 Colicin V production protein E3399_RS07225 PF00156 Phosphoribosyl transferase domain E3399_RS07230 PF13426 PAS domain E3399_RS07230 PF00158 Sigma-54 interaction domain E3399_RS07230 PF02954 Bacterial regulatory protein, Fis family E3399_RS07235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E3399_RS07235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3399_RS07240 PF13520 Amino acid permease E3399_RS07245 PF01168 Alanine racemase, N-terminal domain E3399_RS07250 PF00324 Amino acid permease E3399_RS07255 PF02441 Flavoprotein E3399_RS07260 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS07265 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS07280 PF00005 ABC transporter E3399_RS07285 PF08338 Domain of unknown function (DUF1731) E3399_RS07285 PF01370 NAD dependent epimerase/dehydratase family E3399_RS07290 PF00043 Glutathione S-transferase, C-terminal domain E3399_RS07290 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS07295 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS07295 PF14834 Glutathione S-transferase, C-terminal domain E3399_RS07300 PF12850 Calcineurin-like phosphoesterase superfamily domain E3399_RS07305 PF00293 NUDIX domain E3399_RS07310 PF00356 Bacterial regulatory proteins, lacI family E3399_RS07315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS07325 PF03611 PTS system sugar-specific permease component E3399_RS07330 PF00456 Transketolase, thiamine diphosphate binding domain E3399_RS07335 PF02779 Transketolase, pyrimidine binding domain E3399_RS07335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E3399_RS07335 PF02780 Transketolase, C-terminal domain E3399_RS07340 PF03606 C4-dicarboxylate anaerobic carrier E3399_RS07345 PF01515 Phosphate acetyl/butaryl transferase E3399_RS07345 PF07085 DRTGG domain E3399_RS07350 PF00871 Acetokinase family E3399_RS07355 PF04217 Protein of unknown function, DUF412 E3399_RS07360 PF03887 YfbU domain E3399_RS07365 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS07370 PF03600 Citrate transporter E3399_RS07370 PF02080 TrkA-C domain E3399_RS07385 PF00155 Aminotransferase class I and II E3399_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS07390 PF03466 LysR substrate binding domain E3399_RS07400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E3399_RS07405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3399_RS07410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E3399_RS07410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E3399_RS07420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E3399_RS07420 PF10531 SLBB domain E3399_RS07420 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E3399_RS07425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS07425 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E3399_RS07425 PF00384 Molybdopterin oxidoreductase E3399_RS07425 PF01568 Molydopterin dinucleotide binding domain E3399_RS07430 PF00146 NADH dehydrogenase E3399_RS07435 PF12838 4Fe-4S dicluster domain E3399_RS07440 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E3399_RS07445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E3399_RS07450 PF00361 Proton-conducting membrane transporter E3399_RS07450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E3399_RS07455 PF00361 Proton-conducting membrane transporter E3399_RS07460 PF00361 Proton-conducting membrane transporter E3399_RS07465 PF00072 Response regulator receiver domain E3399_RS07465 PF01584 CheW-like domain E3399_RS07470 PF12706 Beta-lactamase superfamily domain E3399_RS07475 PF13673 Acetyltransferase (GNAT) domain E3399_RS07480 PF05957 Bacterial protein of unknown function (DUF883) E3399_RS07485 PF00425 chorismate binding enzyme E3399_RS07490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS07490 PF16582 Middle domain of thiamine pyrophosphate E3399_RS07490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS07495 PF12697 Alpha/beta hydrolase family E3399_RS07500 PF00378 Enoyl-CoA hydratase/isomerase E3399_RS07505 PF13378 Enolase C-terminal domain-like E3399_RS07510 PF00501 AMP-binding enzyme E3399_RS07510 PF13193 AMP-binding enzyme C-terminal domain E3399_RS07525 PF00892 EamA-like transporter family E3399_RS07530 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E3399_RS07535 PF01522 Polysaccharide deacetylase E3399_RS07540 PF00551 Formyl transferase E3399_RS07540 PF01370 NAD dependent epimerase/dehydratase family E3399_RS07540 PF02911 Formyl transferase, C-terminal domain E3399_RS07545 PF00535 Glycosyl transferase family 2 E3399_RS07550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3399_RS07555 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS07560 PF00293 NUDIX domain E3399_RS07565 PF07437 YfaZ precursor E3399_RS07570 PF00994 Probable molybdopterin binding domain E3399_RS07575 PF01614 Bacterial transcriptional regulator E3399_RS07575 PF09339 IclR helix-turn-helix domain E3399_RS07580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS07580 PF13378 Enolase C-terminal domain-like E3399_RS07585 PF07690 Major Facilitator Superfamily E3399_RS07590 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS07595 PF00994 Probable molybdopterin binding domain E3399_RS07605 PF13183 4Fe-4S dicluster domain E3399_RS07605 PF02754 Cysteine-rich domain E3399_RS07610 PF00890 FAD binding domain E3399_RS07615 PF04324 BFD-like [2Fe-2S] binding domain E3399_RS07615 PF01266 FAD dependent oxidoreductase E3399_RS07620 PF07690 Major Facilitator Superfamily E3399_RS07625 PF03009 Glycerophosphoryl diester phosphodiesterase family E3399_RS07630 PF03466 LysR substrate binding domain E3399_RS07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS07635 PF07690 Major Facilitator Superfamily E3399_RS07640 PF00111 2Fe-2S iron-sulfur cluster binding domain E3399_RS07645 PF00268 Ribonucleotide reductase, small chain E3399_RS07650 PF02867 Ribonucleotide reductase, barrel domain E3399_RS07650 PF00317 Ribonucleotide reductase, all-alpha domain E3399_RS07650 PF03477 ATP cone domain E3399_RS07665 PF07690 Major Facilitator Superfamily E3399_RS07670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS07670 PF13378 Enolase C-terminal domain-like E3399_RS07675 PF00521 DNA gyrase/topoisomerase IV, subunit A E3399_RS07675 PF03989 DNA gyrase C-terminal domain, beta-propeller E3399_RS07680 PF09456 RcsC Alpha-Beta-Loop (ABL) E3399_RS07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS07680 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS07680 PF00072 Response regulator receiver domain E3399_RS07685 PF00072 Response regulator receiver domain E3399_RS07685 PF00196 Bacterial regulatory proteins, luxR family E3399_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS07690 PF16359 RcsD-ABL domain E3399_RS07690 PF01627 Hpt domain E3399_RS07695 PF00267 Gram-negative porin E3399_RS07700 PF02424 ApbE family E3399_RS07705 PF12833 Helix-turn-helix domain E3399_RS07705 PF02805 Metal binding domain of Ada E3399_RS07705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3399_RS07705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3399_RS07710 PF13532 2OG-Fe(II) oxygenase superfamily E3399_RS07715 PF00005 ABC transporter E3399_RS07720 PF03974 Ecotin E3399_RS07725 PF00037 4Fe-4S binding domain E3399_RS07725 PF13187 4Fe-4S dicluster domain E3399_RS07725 PF12800 4Fe-4S binding domain E3399_RS07730 PF03927 NapD protein E3399_RS07735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS07735 PF00384 Molybdopterin oxidoreductase E3399_RS07735 PF01568 Molydopterin dinucleotide binding domain E3399_RS07740 PF12838 4Fe-4S dicluster domain E3399_RS07740 PF12800 4Fe-4S binding domain E3399_RS07745 PF13237 4Fe-4S dicluster domain E3399_RS07745 PF12801 4Fe-4S binding domain E3399_RS07750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E3399_RS07755 PF03264 NapC/NirT cytochrome c family, N-terminal region E3399_RS07760 PF00005 ABC transporter E3399_RS07765 PF03379 CcmB protein E3399_RS07770 PF01578 Cytochrome C assembly protein E3399_RS07775 PF04995 Heme exporter protein D (CcmD) E3399_RS07780 PF03100 CcmE E3399_RS07785 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E3399_RS07785 PF01578 Cytochrome C assembly protein E3399_RS07790 PF08534 Redoxin E3399_RS07795 PF03918 Cytochrome C biogenesis protein E3399_RS07800 PF00072 Response regulator receiver domain E3399_RS07800 PF00196 Bacterial regulatory proteins, luxR family E3399_RS07815 PF07484 Phage Tail Collar Domain E3399_RS07815 PF08400 Prophage tail fibre N-terminal E3399_RS07815 PF03335 Phage tail fibre repeat E3399_RS07825 PF14496 C-terminal novel E3 ligase, LRR-interacting E3399_RS07825 PF12468 Type III secretion system leucine rich repeat protein E3399_RS07840 PF00884 Sulfatase E3399_RS07840 PF11893 Domain of unknown function (DUF3413) E3399_RS07845 PF07208 Protein of unknown function (DUF1414) E3399_RS07850 PF04245 37-kD nucleoid-associated bacterial protein E3399_RS07860 PF01386 Ribosomal L25p family E3399_RS07865 PF00271 Helicase conserved C-terminal domain E3399_RS07865 PF04851 Type III restriction enzyme, res subunit E3399_RS07870 PF01479 S4 domain E3399_RS07870 PF00849 RNA pseudouridylate synthase E3399_RS07875 PF07690 Major Facilitator Superfamily E3399_RS07880 PF13989 YejG-like protein E3399_RS07885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS07885 PF00005 ABC transporter E3399_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS07890 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS07900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS07905 PF00563 EAL domain E3399_RS07905 PF12792 CSS motif domain associated with EAL E3399_RS07910 PF00877 NlpC/P60 family E3399_RS07915 PF01569 PAP2 superfamily E3399_RS07920 PF07683 Cobalamin synthesis protein cobW C-terminal domain E3399_RS07920 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3399_RS07925 PF01132 Elongation factor P (EF-P) OB domain E3399_RS07925 PF09285 Elongation factor P, C-terminal E3399_RS07925 PF08207 Elongation factor P (EF-P) KOW-like domain E3399_RS07930 PF03692 Putative zinc- or iron-chelating domain E3399_RS07945 PF07690 Major Facilitator Superfamily E3399_RS07950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS07950 PF00381 PTS HPr component phosphorylation site E3399_RS07955 PF00294 pfkB family carbohydrate kinase E3399_RS07960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS07960 PF02378 Phosphotransferase system, EIIC E3399_RS07965 PF01261 Xylose isomerase-like TIM barrel E3399_RS07970 PF03601 Conserved hypothetical protein 698 E3399_RS07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS07975 PF03466 LysR substrate binding domain E3399_RS07980 PF00324 Amino acid permease E3399_RS07985 PF00593 TonB dependent receptor E3399_RS07985 PF07715 TonB-dependent Receptor Plug Domain E3399_RS07990 PF07690 Major Facilitator Superfamily E3399_RS07995 PF18429 Domain of unknown function (DUF5609) E3399_RS08000 PF03315 Serine dehydratase beta chain E3399_RS08000 PF03313 Serine dehydratase alpha chain E3399_RS08010 PF00756 Putative esterase E3399_RS08015 PF01227 GTP cyclohydrolase I E3399_RS08020 PF04235 Protein of unknown function (DUF418) E3399_RS08025 PF00356 Bacterial regulatory proteins, lacI family E3399_RS08030 PF13407 Periplasmic binding protein domain E3399_RS08035 PF00005 ABC transporter E3399_RS08040 PF02653 Branched-chain amino acid transport system / permease component E3399_RS08045 PF01180 Dihydroorotate dehydrogenase E3399_RS08050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3399_RS08050 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS08055 PF10808 Protein of unknown function (DUF2542) E3399_RS08060 PF02698 DUF218 domain E3399_RS08065 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E3399_RS08065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3399_RS08070 PF04172 LrgB-like family E3399_RS08075 PF03788 LrgA family E3399_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS08080 PF03466 LysR substrate binding domain E3399_RS08085 PF07690 Major Facilitator Superfamily E3399_RS08090 PF07883 Cupin domain E3399_RS08095 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3399_RS08100 PF14497 Glutathione S-transferase, C-terminal domain E3399_RS08100 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS08105 PF01494 FAD binding domain E3399_RS08110 PF01207 Dihydrouridine synthase (Dus) E3399_RS08120 PF02321 Outer membrane efflux protein E3399_RS08130 PF09335 SNARE associated Golgi protein E3399_RS08135 PF04893 Yip1 domain E3399_RS08140 PF00768 D-alanyl-D-alanine carboxypeptidase E3399_RS08145 PF01565 FAD binding domain E3399_RS08145 PF09330 D-lactate dehydrogenase, membrane binding E3399_RS08150 PF00933 Glycosyl hydrolase family 3 N terminal domain E3399_RS08150 PF01915 Glycosyl hydrolase family 3 C-terminal domain E3399_RS08150 PF14310 Fibronectin type III-like domain E3399_RS08155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3399_RS08160 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS08165 PF00005 ABC transporter E3399_RS08170 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS08180 PF13411 MerR HTH family regulatory protein E3399_RS08185 PF07694 5TMR of 5TMR-LYT E3399_RS08185 PF06580 Histidine kinase E3399_RS08190 PF00072 Response regulator receiver domain E3399_RS08190 PF04397 LytTr DNA-binding domain E3399_RS08195 PF07308 Protein of unknown function (DUF1456) E3399_RS08205 PF06998 Protein of unknown function (DUF1307) E3399_RS08210 PF09334 tRNA synthetases class I (M) E3399_RS08210 PF01588 Putative tRNA binding domain E3399_RS08215 PF10609 NUBPL iron-transfer P-loop NTPase E3399_RS08230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS08230 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS08235 PF13953 PapC C-terminal domain E3399_RS08235 PF13954 PapC N-terminal domain E3399_RS08235 PF00577 Outer membrane usher protein E3399_RS08240 PF00419 Fimbrial protein E3399_RS08245 PF11776 Nickel/cobalt transporter regulator E3399_RS08250 PF02110 Hydroxyethylthiazole kinase family E3399_RS08255 PF08543 Phosphomethylpyrimidine kinase E3399_RS08260 PF00392 Bacterial regulatory proteins, gntR family E3399_RS08260 PF07702 UTRA domain E3399_RS08265 PF00294 pfkB family carbohydrate kinase E3399_RS08270 PF03747 ADP-ribosylglycohydrolase E3399_RS08275 PF03825 Nucleoside H+ symporter E3399_RS08280 PF01791 DeoC/LacD family aldolase E3399_RS08285 PF00781 Diacylglycerol kinase catalytic domain E3399_RS08295 PF05932 Tir chaperone protein (CesT) family E3399_RS08305 PF01136 Peptidase family U32 E3399_RS08305 PF16325 Peptidase family U32 C-terminal domain E3399_RS08325 PF00072 Response regulator receiver domain E3399_RS08325 PF00486 Transcriptional regulatory protein, C terminal E3399_RS08330 PF00672 HAMP domain E3399_RS08330 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS08335 PF07690 Major Facilitator Superfamily E3399_RS08340 PF00873 AcrB/AcrD/AcrF family E3399_RS08345 PF00873 AcrB/AcrD/AcrF family E3399_RS08350 PF13533 Biotin-lipoyl like E3399_RS08360 PF00012 Hsp70 protein E3399_RS08365 PF06029 AlkA N-terminal domain E3399_RS08365 PF00730 HhH-GPD superfamily base excision DNA repair protein E3399_RS08370 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS08370 PF00563 EAL domain E3399_RS08370 PF13426 PAS domain E3399_RS08370 PF05231 MASE1 E3399_RS08370 PF08448 PAS fold E3399_RS08370 PF08447 PAS fold E3399_RS08375 PF00485 Phosphoribulokinase / Uridine kinase family E3399_RS08380 PF00692 dUTPase E3399_RS08385 PF05170 AsmA family E3399_RS08390 PF03471 Transporter associated domain E3399_RS08390 PF03741 Integral membrane protein TerC family E3399_RS08390 PF00571 CBS domain E3399_RS08395 PF02563 Polysaccharide biosynthesis/export protein E3399_RS08395 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E3399_RS08395 PF10531 SLBB domain E3399_RS08400 PF01451 Low molecular weight phosphotyrosine protein phosphatase E3399_RS08405 PF13614 AAA domain E3399_RS08405 PF02706 Chain length determinant protein E3399_RS08405 PF13807 G-rich domain on putative tyrosine kinase E3399_RS08410 PF00535 Glycosyl transferase family 2 E3399_RS08415 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS08420 PF13439 Glycosyltransferase Family 4 E3399_RS08420 PF00534 Glycosyl transferases group 1 E3399_RS08430 PF00535 Glycosyl transferase family 2 E3399_RS08435 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS08440 PF16363 GDP-mannose 4,6 dehydratase E3399_RS08445 PF01370 NAD dependent epimerase/dehydratase family E3399_RS08450 PF00293 NUDIX domain E3399_RS08455 PF13579 Glycosyl transferase 4-like domain E3399_RS08455 PF00534 Glycosyl transferases group 1 E3399_RS08460 PF00483 Nucleotidyl transferase E3399_RS08460 PF01050 Mannose-6-phosphate isomerase E3399_RS08465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3399_RS08465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3399_RS08465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3399_RS08465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3399_RS08470 PF02397 Bacterial sugar transferase E3399_RS08480 PF04230 Polysaccharide pyruvyl transferase E3399_RS08485 PF00534 Glycosyl transferases group 1 E3399_RS08485 PF13439 Glycosyltransferase Family 4 E3399_RS08495 PF00483 Nucleotidyl transferase E3399_RS08510 PF00534 Glycosyl transferases group 1 E3399_RS08510 PF09318 Glycosyl transferase 1 domain A E3399_RS08520 PF00483 Nucleotidyl transferase E3399_RS08520 PF01050 Mannose-6-phosphate isomerase E3399_RS08525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3399_RS08525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3399_RS08525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3399_RS08525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3399_RS08535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain E3399_RS08535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3399_RS08540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3399_RS08540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3399_RS08545 PF02706 Chain length determinant protein E3399_RS08550 PF01502 Phosphoribosyl-AMP cyclohydrolase E3399_RS08550 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E3399_RS08555 PF00977 Histidine biosynthesis protein E3399_RS08560 PF00977 Histidine biosynthesis protein E3399_RS08565 PF00117 Glutamine amidotransferase class-I E3399_RS08570 PF00475 Imidazoleglycerol-phosphate dehydratase E3399_RS08575 PF00155 Aminotransferase class I and II E3399_RS08580 PF00815 Histidinol dehydrogenase E3399_RS08585 PF08029 HisG, C-terminal domain E3399_RS08585 PF01634 ATP phosphoribosyltransferase E3399_RS08595 PF01370 NAD dependent epimerase/dehydratase family E3399_RS08600 PF03466 LysR substrate binding domain E3399_RS08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS08610 PF13520 Amino acid permease E3399_RS08615 PF08411 Exonuclease C-terminal E3399_RS08615 PF00929 Exonuclease E3399_RS08620 PF13979 SopA-like catalytic domain E3399_RS08620 PF13981 SopA-like central domain E3399_RS08630 PF01568 Molydopterin dinucleotide binding domain E3399_RS08630 PF00384 Molybdopterin oxidoreductase E3399_RS08630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS08635 PF12800 4Fe-4S binding domain E3399_RS08635 PF13247 4Fe-4S dicluster domain E3399_RS08640 PF01292 Prokaryotic cytochrome b561 E3399_RS08645 PF07943 Penicillin-binding protein 5, C-terminal domain E3399_RS08645 PF00768 D-alanyl-D-alanine carboxypeptidase E3399_RS08650 PF06445 GyrI-like small molecule binding domain E3399_RS08655 PF04632 Fusaric acid resistance protein family E3399_RS08660 PF04363 Protein of unknown function (DUF496) E3399_RS08665 PF00288 GHMP kinases N terminal domain E3399_RS08670 PF00871 Acetokinase family E3399_RS08675 PF10662 Ethanolamine utilisation - propanediol utilisation E3399_RS08680 PF00936 BMC domain E3399_RS08690 PF10531 SLBB domain E3399_RS08690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E3399_RS08690 PF13375 RnfC Barrel sandwich hybrid domain E3399_RS08690 PF13237 4Fe-4S dicluster domain E3399_RS08695 PF00465 Iron-containing alcohol dehydrogenase E3399_RS08695 PF00171 Aldehyde dehydrogenase family E3399_RS08700 PF00171 Aldehyde dehydrogenase family E3399_RS08705 PF01923 Cobalamin adenosyltransferase E3399_RS08710 PF03319 Ethanolamine utilisation protein EutN/carboxysome E3399_RS08720 PF06130 Phosphate propanoyltransferase E3399_RS08725 PF00936 BMC domain E3399_RS08730 PF00936 BMC domain E3399_RS08740 PF18427 DD-reactivating factor swiveling domain E3399_RS08740 PF08841 Diol dehydratase reactivase ATPase-like domain E3399_RS08745 PF02287 Dehydratase small subunit E3399_RS08750 PF02288 Dehydratase medium subunit E3399_RS08755 PF02286 Dehydratase large subunit E3399_RS08760 PF00936 BMC domain E3399_RS08765 PF00936 BMC domain E3399_RS08770 PF00230 Major intrinsic protein E3399_RS08775 PF10114 Sensory domain found in PocR E3399_RS08775 PF12833 Helix-turn-helix domain E3399_RS08780 PF07685 CobB/CobQ-like glutamine amidotransferase domain E3399_RS08780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E3399_RS08785 PF03186 CobD/Cbib protein E3399_RS08790 PF02570 Precorrin-8X methylmutase E3399_RS08795 PF01888 CbiD E3399_RS08800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS08805 PF05175 Methyltransferase small domain E3399_RS08810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS08815 PF11761 Cobalamin biosynthesis central region E3399_RS08815 PF11760 Cobalamin synthesis G N-terminal E3399_RS08815 PF01890 Cobalamin synthesis G C-terminus E3399_RS08820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS08825 PF02571 Precorrin-6x reductase CbiJ/CobK E3399_RS08830 PF06180 Cobalt chelatase (CbiK) E3399_RS08835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3399_RS08840 PF01891 Cobalt uptake substrate-specific transmembrane region E3399_RS08845 PF02553 Cobalt transport protein component CbiN E3399_RS08850 PF02361 Cobalt transport protein E3399_RS08855 PF00005 ABC transporter E3399_RS08860 PF07685 CobB/CobQ-like glutamine amidotransferase domain E3399_RS08865 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase E3399_RS08870 PF02654 Cobalamin-5-phosphate synthase E3399_RS08875 PF02277 Phosphoribosyltransferase E3399_RS08880 PF17969 L,D-transpeptidase C-terminal domain E3399_RS08880 PF03734 L,D-transpeptidase catalytic domain E3399_RS08890 PF01554 MatE E3399_RS08915 PF13358 DDE superfamily endonuclease E3399_RS08915 PF13592 Winged helix-turn helix E3399_RS08940 PF01048 Phosphorylase superfamily E3399_RS08940 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus E3399_RS08985 PF13356 Arm DNA-binding domain E3399_RS08985 PF00589 Phage integrase family E3399_RS08995 PF06167 Glucose-regulated metallo-peptidase M90 E3399_RS09015 PF00717 Peptidase S24-like E3399_RS09020 PF11799 impB/mucB/samB family C-terminal domain E3399_RS09020 PF13438 Domain of unknown function (DUF4113) E3399_RS09020 PF00817 impB/mucB/samB family E3399_RS09025 PF00313 'Cold-shock' DNA-binding domain E3399_RS09035 PF00267 Gram-negative porin E3399_RS09045 PF01966 HD domain E3399_RS09050 PF00145 C-5 cytosine-specific DNA methylase E3399_RS09050 PF18284 DNA methylase N-terminal domain E3399_RS09055 PF03852 DNA mismatch endonuclease Vsr E3399_RS09060 PF00892 EamA-like transporter family E3399_RS09065 PF05661 Protein of unknown function (DUF808) E3399_RS09070 PF09926 Uncharacterized small protein (DUF2158) E3399_RS09075 PF17151 Periplasmic sensor domain E3399_RS09075 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS09085 PF10733 Protein of unknown function (DUF2525) E3399_RS09090 PF10781 Dextransucrase DSRB E3399_RS09095 PF00196 Bacterial regulatory proteins, luxR family E3399_RS09100 PF01311 Bacterial export proteins, family 1 E3399_RS09105 PF01313 Bacterial export proteins, family 3 E3399_RS09110 PF00813 FliP family E3399_RS09115 PF04347 Flagellar biosynthesis protein, FliO E3399_RS09120 PF16973 Flagellar motor switch protein FliN N-terminal E3399_RS09120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3399_RS09125 PF02154 Flagellar motor switch protein FliM E3399_RS09125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3399_RS09130 PF03748 Flagellar basal body-associated protein FliL E3399_RS09135 PF02120 Flagellar hook-length control protein FliK E3399_RS09140 PF02050 Flagellar FliJ protein E3399_RS09145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS09145 PF18269 T3SS EscN ATPase C-terminal domain E3399_RS09150 PF02108 Flagellar assembly protein FliH E3399_RS09155 PF14842 FliG N-terminal domain E3399_RS09155 PF14841 FliG middle domain E3399_RS09155 PF01706 FliG C-terminal domain E3399_RS09160 PF01514 Secretory protein of YscJ/FliF family E3399_RS09160 PF08345 Flagellar M-ring protein C-terminal E3399_RS09165 PF02049 Flagellar hook-basal body complex protein FliE E3399_RS09175 PF01206 Sulfurtransferase TusA E3399_RS09180 PF04143 Sulphur transport E3399_RS09185 PF13987 YedD-like protein E3399_RS09190 PF00128 Alpha amylase, catalytic domain E3399_RS09190 PF02806 Alpha amylase, C-terminal all-beta domain E3399_RS09195 PF05400 Flagellar protein FliT E3399_RS09200 PF02561 Flagellar protein FliS E3399_RS09205 PF02465 Flagellar hook-associated protein 2 N-terminus E3399_RS09205 PF07196 Flagellin hook IN motif E3399_RS09205 PF07195 Flagellar hook-associated protein 2 C-terminus E3399_RS09210 PF00669 Bacterial flagellin N-terminal helical region E3399_RS09210 PF00700 Bacterial flagellin C-terminal helical region E3399_RS09210 PF08884 Flagellin D3 domain E3399_RS09220 PF04542 Sigma-70 region 2 E3399_RS09220 PF04539 Sigma-70 region 3 E3399_RS09220 PF04545 Sigma-70, region 4 E3399_RS09225 PF02899 Phage integrase, N-terminal SAM-like domain E3399_RS09230 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS09235 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS09245 PF00005 ABC transporter E3399_RS09250 PF03472 Autoinducer binding domain E3399_RS09250 PF00196 Bacterial regulatory proteins, luxR family E3399_RS09255 PF10769 Protein of unknown function (DUF2594) E3399_RS09265 PF00072 Response regulator receiver domain E3399_RS09265 PF00196 Bacterial regulatory proteins, luxR family E3399_RS09270 PF01541 GIY-YIG catalytic domain E3399_RS09270 PF08459 UvrC Helix-hairpin-helix N-terminal E3399_RS09270 PF02151 UvrB/uvrC motif E3399_RS09275 PF01066 CDP-alcohol phosphatidyltransferase E3399_RS09310 PF02810 SEC-C motif E3399_RS09310 PF03695 Uncharacterised protein family (UPF0149) E3399_RS09315 PF03222 Tryptophan/tyrosine permease family E3399_RS09320 PF10678 Protein of unknown function (DUF2492) E3399_RS09325 PF00210 Ferritin-like domain E3399_RS09330 PF13992 YecR-like lipoprotein E3399_RS09340 PF00210 Ferritin-like domain E3399_RS09355 PF02358 Trehalose-phosphatase E3399_RS09360 PF00982 Glycosyltransferase family 20 E3399_RS09365 PF00582 Universal stress protein family E3399_RS09375 PF05247 Flagellar transcriptional activator (FlhD) E3399_RS09380 PF05280 Flagellar transcriptional activator (FlhC) E3399_RS09385 PF01618 MotA/TolQ/ExbB proton channel family E3399_RS09390 PF00691 OmpA family E3399_RS09390 PF13677 Membrane MotB of proton-channel complex MotA/MotB E3399_RS09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS09395 PF01627 Hpt domain E3399_RS09395 PF02895 Signal transducing histidine kinase, homodimeric domain E3399_RS09395 PF09078 CheY binding E3399_RS09395 PF01584 CheW-like domain E3399_RS09400 PF01584 CheW-like domain E3399_RS09405 PF00672 HAMP domain E3399_RS09405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS09405 PF02203 Tar ligand binding domain homologue E3399_RS09410 PF03705 CheR methyltransferase, all-alpha domain E3399_RS09410 PF01739 CheR methyltransferase, SAM binding domain E3399_RS09415 PF00072 Response regulator receiver domain E3399_RS09415 PF01339 CheB methylesterase E3399_RS09420 PF00072 Response regulator receiver domain E3399_RS09425 PF04344 Chemotaxis phosphatase, CheZ E3399_RS09430 PF01312 FlhB HrpN YscU SpaS Family E3399_RS09435 PF00771 FHIPEP family E3399_RS09440 PF06366 Flagellar protein FlhE E3399_RS09445 PF07470 Glycosyl Hydrolase Family 88 E3399_RS09450 PF00905 Penicillin binding protein transpeptidase domain E3399_RS09450 PF03717 Penicillin-binding Protein dimerisation domain E3399_RS09455 PF05746 DALR anticodon binding domain E3399_RS09455 PF00750 tRNA synthetases class I (R) E3399_RS09455 PF03485 Arginyl tRNA synthetase N terminal domain E3399_RS09460 PF06185 YecM protein E3399_RS09465 PF03932 CutC family E3399_RS09470 PF08003 Protein of unknown function (DUF1698) E3399_RS09475 PF13649 Methyltransferase domain E3399_RS09480 PF01124 MAPEG family E3399_RS09485 PF01904 Protein of unknown function DUF72 E3399_RS09490 PF00857 Isochorismatase family E3399_RS09495 PF00152 tRNA synthetases class II (D, K and N) E3399_RS09495 PF02938 GAD domain E3399_RS09495 PF01336 OB-fold nucleic acid binding domain E3399_RS09500 PF00293 NUDIX domain E3399_RS09505 PF01709 Transcriptional regulator E3399_RS09510 PF02075 Crossover junction endodeoxyribonuclease RuvC E3399_RS09520 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E3399_RS09530 PF01330 RuvA N terminal domain E3399_RS09530 PF07499 RuvA, C-terminal domain E3399_RS09535 PF05491 RuvB C-terminal winged helix domain E3399_RS09535 PF05496 Holliday junction DNA helicase RuvB P-loop domain E3399_RS09535 PF17864 RuvB AAA lid domain E3399_RS09540 PF00950 ABC 3 transport family E3399_RS09545 PF00005 ABC transporter E3399_RS09550 PF01297 Zinc-uptake complex component A periplasmic E3399_RS09555 PF01476 LysM domain E3399_RS09555 PF01551 Peptidase family M23 E3399_RS09555 PF08525 Opacity-associated protein A N-terminal motif E3399_RS09560 PF03279 Bacterial lipid A biosynthesis acyltransferase E3399_RS09565 PF00224 Pyruvate kinase, barrel domain E3399_RS09565 PF02887 Pyruvate kinase, alpha/beta domain E3399_RS09570 PF01418 Helix-turn-helix domain, rpiR family E3399_RS09570 PF01380 SIS domain E3399_RS09575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain E3399_RS09575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain E3399_RS09580 PF00920 Dehydratase family E3399_RS09585 PF01081 KDPG and KHG aldolase E3399_RS09590 PF02222 ATP-grasp domain E3399_RS09595 PF07130 YebG protein E3399_RS09605 PF04391 Protein of unknown function (DUF533) E3399_RS09610 PF00326 Prolyl oligopeptidase family E3399_RS09610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E3399_RS09615 PF00929 Exonuclease E3399_RS09620 PF00795 Carbon-nitrogen hydrolase E3399_RS09625 PF06440 DNA polymerase III, theta subunit E3399_RS09630 PF04234 CopC domain E3399_RS09635 PF05425 Copper resistance protein D E3399_RS09640 PF10709 Protein of unknown function (DUF2511) E3399_RS09655 PF06630 Enterobacterial exodeoxyribonuclease VIII E3399_RS09655 PF12684 PDDEXK-like domain of unknown function (DUF3799) E3399_RS09665 PF10721 Protein of unknown function (DUF2514) E3399_RS09705 PF02040 Arsenical pump membrane protein E3399_RS09730 PF00892 EamA-like transporter family E3399_RS09755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3399_RS09755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3399_RS09755 PF03129 Anticodon binding domain E3399_RS09755 PF02824 TGS domain E3399_RS09765 PF00583 Acetyltransferase (GNAT) family E3399_RS09775 PF07166 Protein of unknown function (DUF1398) E3399_RS09780 PF07487 SopE GEF domain E3399_RS09780 PF05364 Salmonella type III secretion SopE effector N-terminus E3399_RS09790 PF00149 Calcineurin-like phosphoesterase E3399_RS09795 PF07358 Protein of unknown function (DUF1482) E3399_RS09800 PF07351 Protein of unknown function (DUF1480) E3399_RS09805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E3399_RS09805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E3399_RS09805 PF01189 16S rRNA methyltransferase RsmB/F E3399_RS09810 PF02470 MlaD protein E3399_RS09815 PF04403 Paraquat-inducible protein A E3399_RS09820 PF13185 GAF domain E3399_RS09825 PF17516 ProQ C-terminal domain E3399_RS09825 PF04352 ProQ/FINO family E3399_RS09830 PF00595 PDZ domain E3399_RS09830 PF11818 C-terminal domain of tail specific protease (DUF3340) E3399_RS09830 PF17804 Tail specific protease N-terminal domain E3399_RS09830 PF03572 Peptidase family S41 E3399_RS09835 PF01435 Peptidase family M48 E3399_RS09840 PF07690 Major Facilitator Superfamily E3399_RS09845 PF09339 IclR helix-turn-helix domain E3399_RS09845 PF01614 Bacterial transcriptional regulator E3399_RS09850 PF13996 YobH-like protein E3399_RS09855 PF13998 MgrB protein E3399_RS09860 PF13974 YebO-like protein E3399_RS09865 PF10736 Protein of unknown function (DUF2627) E3399_RS09870 PF00313 'Cold-shock' DNA-binding domain E3399_RS09875 PF00905 Penicillin binding protein transpeptidase domain E3399_RS09875 PF03717 Penicillin-binding Protein dimerisation domain E3399_RS09880 PF13847 Methyltransferase domain E3399_RS09885 PF02659 Putative manganese efflux pump E3399_RS09890 PF06173 Protein of unknown function (DUF986) E3399_RS09895 PF03613 PTS system mannose/fructose/sorbose family IID component E3399_RS09900 PF03609 PTS system sorbose-specific iic component E3399_RS09905 PF03830 PTS system sorbose subfamily IIB component E3399_RS09905 PF03610 PTS system fructose IIA component E3399_RS09910 PF03741 Integral membrane protein TerC family E3399_RS09910 PF03471 Transporter associated domain E3399_RS09915 PF12792 CSS motif domain associated with EAL E3399_RS09915 PF00563 EAL domain E3399_RS09920 PF03315 Serine dehydratase beta chain E3399_RS09920 PF03313 Serine dehydratase alpha chain E3399_RS09925 PF00293 NUDIX domain E3399_RS09930 PF04715 Anthranilate synthase component I, N terminal region E3399_RS09930 PF00425 chorismate binding enzyme E3399_RS09935 PF03701 Uncharacterised protein family (UPF0181) E3399_RS09940 PF01042 Endoribonuclease L-PSP E3399_RS09945 PF04851 Type III restriction enzyme, res subunit E3399_RS09945 PF13307 Helicase C-terminal domain E3399_RS09950 PF00814 Glycoprotease family E3399_RS09955 PF03843 Outer membrane lipoprotein Slp family E3399_RS09960 PF00501 AMP-binding enzyme E3399_RS09960 PF13193 AMP-binding enzyme C-terminal domain E3399_RS09965 PF01612 3'-5' exonuclease E3399_RS09965 PF00570 HRDC domain E3399_RS09970 PF03776 Septum formation topological specificity factor MinE E3399_RS09975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E3399_RS09980 PF05209 Septum formation inhibitor MinC, N-terminal domain E3399_RS09980 PF03775 Septum formation inhibitor MinC, C-terminal domain E3399_RS09985 PF05166 YcgL domain E3399_RS09990 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3399_RS09995 PF03692 Putative zinc- or iron-chelating domain E3399_RS10005 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system E3399_RS10015 PF02600 Disulfide bond formation protein DsbB E3399_RS10020 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E3399_RS10025 PF00392 Bacterial regulatory proteins, gntR family E3399_RS10025 PF07840 FadR C-terminal domain E3399_RS10030 PF04293 SpoVR like protein E3399_RS10035 PF01266 FAD dependent oxidoreductase E3399_RS10040 PF00842 Alanine racemase, C-terminal domain E3399_RS10040 PF01168 Alanine racemase, N-terminal domain E3399_RS10045 PF00999 Sodium/hydrogen exchanger family E3399_RS10045 PF02080 TrkA-C domain E3399_RS10045 PF03471 Transporter associated domain E3399_RS10050 PF02016 LD-carboxypeptidase N-terminal domain E3399_RS10050 PF17676 LD-carboxypeptidase C-terminal domain E3399_RS10055 PF01464 Transglycosylase SLT domain E3399_RS10060 PF07317 Flagellar regulator YcgR E3399_RS10060 PF07238 PilZ domain E3399_RS10065 PF04226 Transglycosylase associated protein E3399_RS10070 PF01204 Trehalase E3399_RS10075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3399_RS10075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3399_RS10080 PF08173 Membrane bound YbgT-like protein E3399_RS10085 PF02322 Cytochrome bd terminal oxidase subunit II E3399_RS10090 PF01654 Cytochrome bd terminal oxidase subunit I E3399_RS10095 PF04809 HupH hydrogenase expression protein, C-terminal conserved region E3399_RS10100 PF07449 Hydrogenase-1 expression protein HyaE E3399_RS10105 PF01750 Hydrogenase maturation protease E3399_RS10110 PF01292 Prokaryotic cytochrome b561 E3399_RS10115 PF00374 Nickel-dependent hydrogenase E3399_RS10120 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E3399_RS10120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3399_RS10135 PF06071 Protein of unknown function (DUF933) E3399_RS10135 PF01926 50S ribosome-binding GTPase E3399_RS10140 PF01195 Peptidyl-tRNA hydrolase E3399_RS10145 PF10762 Protein of unknown function (DUF2583) E3399_RS10150 PF01740 STAS domain E3399_RS10150 PF00916 Sulfate permease family E3399_RS10155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E3399_RS10155 PF14572 Phosphoribosyl synthetase-associated domain E3399_RS10160 PF08544 GHMP kinases C terminal E3399_RS10160 PF00288 GHMP kinases N terminal domain E3399_RS10165 PF03550 Outer membrane lipoprotein LolB E3399_RS10170 PF01488 Shikimate / quinate 5-dehydrogenase E3399_RS10170 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E3399_RS10170 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E3399_RS10175 PF03462 PCRF domain E3399_RS10175 PF00472 RF-1 domain E3399_RS10180 PF17827 PrmC N-terminal domain E3399_RS10180 PF13847 Methyltransferase domain E3399_RS10185 PF04247 Invasion gene expression up-regulator, SirB E3399_RS10190 PF13369 Transglutaminase-like superfamily E3399_RS10195 PF00793 DAHP synthetase I family E3399_RS10200 PF01699 Sodium/calcium exchanger protein E3399_RS10205 PF06150 ChaB E3399_RS10210 PF02635 DsrE/DsrF-like family E3399_RS10215 PF11924 Inverse autotransporter, beta-domain E3399_RS10220 PF00196 Bacterial regulatory proteins, luxR family E3399_RS10220 PF00072 Response regulator receiver domain E3399_RS10225 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E3399_RS10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS10225 PF07730 Histidine kinase E3399_RS10225 PF00672 HAMP domain E3399_RS10230 PF07690 Major Facilitator Superfamily E3399_RS10235 PF14710 Respiratory nitrate reductase alpha N-terminal E3399_RS10235 PF01568 Molydopterin dinucleotide binding domain E3399_RS10235 PF00384 Molybdopterin oxidoreductase E3399_RS10240 PF13247 4Fe-4S dicluster domain E3399_RS10240 PF14711 Respiratory nitrate reductase beta C-terminal E3399_RS10245 PF02613 Nitrate reductase delta subunit E3399_RS10250 PF02665 Nitrate reductase gamma subunit E3399_RS10295 PF00551 Formyl transferase E3399_RS10295 PF01842 ACT domain E3399_RS10300 PF02810 SEC-C motif E3399_RS10305 PF01734 Patatin-like phospholipase E3399_RS10310 PF00072 Response regulator receiver domain E3399_RS10315 PF00483 Nucleotidyl transferase E3399_RS10320 PF00816 H-NS histone family E3399_RS10325 PF00265 Thymidine kinase E3399_RS10330 PF00171 Aldehyde dehydrogenase family E3399_RS10330 PF00465 Iron-containing alcohol dehydrogenase E3399_RS10335 PF01914 MarC family integral membrane protein E3399_RS10340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS10345 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10350 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS10350 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10355 PF00005 ABC transporter E3399_RS10355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS10360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS10360 PF00005 ABC transporter E3399_RS10365 PF00520 Ion transport protein E3399_RS10365 PF00027 Cyclic nucleotide-binding domain E3399_RS10370 PF04269 Protein of unknown function, DUF440 E3399_RS10375 PF13396 Phospholipase_D-nuclease N-terminal E3399_RS10375 PF13091 PLD-like domain E3399_RS10385 PF03795 YCII-related domain E3399_RS10390 PF03544 Gram-negative bacterial TonB protein C-terminal E3399_RS10395 PF03061 Thioesterase superfamily E3399_RS10400 PF04279 Intracellular septation protein A E3399_RS10410 PF03692 Putative zinc- or iron-chelating domain E3399_RS10415 PF03922 OmpW family E3399_RS10420 PF05067 Manganese containing catalase E3399_RS10425 PF05974 Domain of unknown function (DUF892) E3399_RS10430 PF05974 Domain of unknown function (DUF892) E3399_RS10435 PF10685 Stress-induced bacterial acidophilic repeat motif E3399_RS10440 PF00290 Tryptophan synthase alpha chain E3399_RS10445 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS10450 PF00218 Indole-3-glycerol phosphate synthase E3399_RS10450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E3399_RS10455 PF00117 Glutamine amidotransferase class-I E3399_RS10455 PF00591 Glycosyl transferase family, a/b domain E3399_RS10455 PF02885 Glycosyl transferase family, helical bundle domain E3399_RS10460 PF04715 Anthranilate synthase component I, N terminal region E3399_RS10460 PF00425 chorismate binding enzyme E3399_RS10465 PF08255 Trp-operon Leader Peptide E3399_RS10470 PF02811 PHP domain E3399_RS10475 PF01300 Telomere recombination E3399_RS10480 PF00849 RNA pseudouridylate synthase E3399_RS10480 PF01479 S4 domain E3399_RS10485 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E3399_RS10490 PF00106 short chain dehydrogenase E3399_RS10495 PF08496 Peptidase family S49 N-terminal E3399_RS10495 PF01343 Peptidase family S49 E3399_RS10500 PF10692 Protein of unknown function (DUF2498) E3399_RS10505 PF08272 Topoisomerase I zinc-ribbon-like E3399_RS10505 PF01396 Topoisomerase DNA binding C4 zinc finger E3399_RS10505 PF01751 Toprim domain E3399_RS10505 PF01131 DNA topoisomerase E3399_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS10515 PF03466 LysR substrate binding domain E3399_RS10530 PF00694 Aconitase C-terminal domain E3399_RS10530 PF00330 Aconitase family (aconitate hydratase) E3399_RS10535 PF00925 GTP cyclohydrolase II E3399_RS10540 PF01569 PAP2 superfamily E3399_RS10545 PF06305 Lipopolysaccharide assembly protein A domain E3399_RS10550 PF18073 Rubredoxin metal binding domain E3399_RS10555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3399_RS10560 PF01253 Translation initiation factor SUI1 E3399_RS10565 PF05433 Glycine zipper 2TM domain E3399_RS10570 PF00455 DeoR C terminal sensor domain E3399_RS10570 PF08220 DeoR-like helix-turn-helix domain E3399_RS10580 PF13426 PAS domain E3399_RS10580 PF00563 EAL domain E3399_RS10580 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS10585 PF00575 S1 RNA binding domain E3399_RS10585 PF08206 Ribonuclease B OB domain E3399_RS10585 PF17876 Cold shock domain E3399_RS10585 PF00773 RNB domain E3399_RS10620 PF00005 ABC transporter E3399_RS10625 PF00005 ABC transporter E3399_RS10625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS10630 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10630 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS10635 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS10645 PF00158 Sigma-54 interaction domain E3399_RS10645 PF02954 Bacterial regulatory protein, Fis family E3399_RS10650 PF04012 PspA/IM30 family E3399_RS10655 PF06667 Phage shock protein B E3399_RS10660 PF04024 PspC domain E3399_RS10665 PF09584 Phage shock protein PspD (Phageshock_PspD) E3399_RS10670 PF00581 Rhodanese-like domain E3399_RS10675 PF04317 YcjX-like family, DUF463 E3399_RS10680 PF05128 Domain of unknown function (DUF697) E3399_RS10685 PF00158 Sigma-54 interaction domain E3399_RS10685 PF18024 Helix-turn-helix domain E3399_RS10690 PF08534 Redoxin E3399_RS10695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS10695 PF13378 Enolase C-terminal domain-like E3399_RS10700 PF00246 Zinc carboxypeptidase E3399_RS10705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS10715 PF03466 LysR substrate binding domain E3399_RS10720 PF00248 Aldo/keto reductase family E3399_RS10730 PF00440 Bacterial regulatory proteins, tetR family E3399_RS10745 PF12833 Helix-turn-helix domain E3399_RS10745 PF06445 GyrI-like small molecule binding domain E3399_RS10765 PF08534 Redoxin E3399_RS10785 PF00924 Mechanosensitive ion channel E3399_RS10790 PF10749 Protein of unknown function (DUF2534) E3399_RS10795 PF00582 Universal stress protein family E3399_RS10800 PF00027 Cyclic nucleotide-binding domain E3399_RS10800 PF13545 Crp-like helix-turn-helix domain E3399_RS10805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3399_RS10805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3399_RS10810 PF01713 Smr domain E3399_RS10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS10815 PF00672 HAMP domain E3399_RS10815 PF02203 Tar ligand binding domain homologue E3399_RS10820 PF01544 CorA-like Mg2+ transporter protein E3399_RS10830 PF00271 Helicase conserved C-terminal domain E3399_RS10830 PF03880 DbpA RNA binding domain E3399_RS10830 PF00270 DEAD/DEAH box helicase E3399_RS10835 PF01171 PP-loop family E3399_RS10845 PF00893 Small Multidrug Resistance protein E3399_RS10850 PF00582 Universal stress protein family E3399_RS10855 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E3399_RS10855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS10855 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E3399_RS10855 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E3399_RS10855 PF10371 Domain of unknown function E3399_RS10865 PF03891 Domain of unknown function (DUF333) E3399_RS10870 PF03724 META domain E3399_RS10875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3399_RS10875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3399_RS10880 PF11739 Dicarboxylate transport E3399_RS10885 PF13617 YnbE-like lipoprotein E3399_RS10890 PF07027 Protein of unknown function (DUF1318) E3399_RS10900 PF02525 Flavodoxin-like fold E3399_RS10905 PF00270 DEAD/DEAH box helicase E3399_RS10905 PF11898 Domain of unknown function (DUF3418) E3399_RS10905 PF04408 Helicase associated domain (HA2) E3399_RS10905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E3399_RS10905 PF00271 Helicase conserved C-terminal domain E3399_RS10910 PF02698 DUF218 domain E3399_RS10915 PF01292 Prokaryotic cytochrome b561 E3399_RS10920 PF08242 Methyltransferase domain E3399_RS10930 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10935 PF00005 ABC transporter E3399_RS10940 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS10945 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS10955 PF00657 GDSL-like Lipase/Acylhydrolase E3399_RS10955 PF06767 Sif protein E3399_RS10970 PF02583 Metal-sensitive transcriptional repressor E3399_RS10975 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS10975 PF00107 Zinc-binding dehydrogenase E3399_RS10980 PF00672 HAMP domain E3399_RS10980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS10980 PF02203 Tar ligand binding domain homologue E3399_RS10985 PF03466 LysR substrate binding domain E3399_RS10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS10990 PF07063 Domain of unknown function (DUF1338) E3399_RS10995 PF00135 Carboxylesterase family E3399_RS11000 PF04349 Periplasmic glucan biosynthesis protein, MdoG E3399_RS11005 PF04264 YceI-like domain E3399_RS11010 PF01070 FMN-dependent dehydrogenase E3399_RS11015 PF00583 Acetyltransferase (GNAT) family E3399_RS11020 PF00455 DeoR C terminal sensor domain E3399_RS11020 PF08220 DeoR-like helix-turn-helix domain E3399_RS11025 PF00834 Ribulose-phosphate 3 epimerase family E3399_RS11030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS11035 PF03437 BtpA family E3399_RS11040 PF03611 PTS system sugar-specific permease component E3399_RS11045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS11050 PF05343 M42 glutamyl aminopeptidase E3399_RS11055 PF13302 Acetyltransferase (GNAT) domain E3399_RS11060 PF18836 Beta solenoid repeat from YDCK E3399_RS11065 PF03595 Voltage-dependent anion channel E3399_RS11070 PF03848 Tellurite resistance protein TehB E3399_RS11075 PF11769 Protein of unknown function (DUF3313) E3399_RS11080 PF03594 Benzoate membrane transport protein E3399_RS11085 PF01381 Helix-turn-helix E3399_RS11085 PF07883 Cupin domain E3399_RS11090 PF01136 Peptidase family U32 E3399_RS11090 PF12392 Collagenase E3399_RS11095 PF10829 Protein of unknown function (DUF2554) E3399_RS11100 PF06767 Sif protein E3399_RS11115 PF01427 D-ala-D-ala dipeptidase E3399_RS11120 PF00392 Bacterial regulatory proteins, gntR family E3399_RS11120 PF00155 Aminotransferase class I and II E3399_RS11125 PF00171 Aldehyde dehydrogenase family E3399_RS11135 PF10753 Toxin GhoT_OrtT E3399_RS11155 PF10735 Protein of unknown function (DUF2526) E3399_RS11160 PF04657 Putative inner membrane exporter, YdcZ E3399_RS11170 PF16884 N-terminal domain of oxidoreductase E3399_RS11170 PF00107 Zinc-binding dehydrogenase E3399_RS11175 PF07729 FCD domain E3399_RS11175 PF00392 Bacterial regulatory proteins, gntR family E3399_RS11180 PF00593 TonB dependent receptor E3399_RS11180 PF07715 TonB-dependent Receptor Plug Domain E3399_RS11190 PF06004 Bacterial protein of unknown function (DUF903) E3399_RS11195 PF00324 Amino acid permease E3399_RS11210 PF00797 N-acetyltransferase E3399_RS11215 PF02567 Phenazine biosynthesis-like protein E3399_RS11220 PF02665 Nitrate reductase gamma subunit E3399_RS11225 PF02613 Nitrate reductase delta subunit E3399_RS11230 PF14711 Respiratory nitrate reductase beta C-terminal E3399_RS11230 PF13247 4Fe-4S dicluster domain E3399_RS11235 PF14710 Respiratory nitrate reductase alpha N-terminal E3399_RS11235 PF00384 Molybdopterin oxidoreductase E3399_RS11235 PF01568 Molydopterin dinucleotide binding domain E3399_RS11240 PF07690 Major Facilitator Superfamily E3399_RS11245 PF00440 Bacterial regulatory proteins, tetR family E3399_RS11250 PF07690 Major Facilitator Superfamily E3399_RS11260 PF00267 Gram-negative porin E3399_RS11265 PF00892 EamA-like transporter family E3399_RS11275 PF09163 Formate dehydrogenase N, transmembrane E3399_RS11275 PF12800 4Fe-4S binding domain E3399_RS11275 PF13247 4Fe-4S dicluster domain E3399_RS11280 PF01292 Prokaryotic cytochrome b561 E3399_RS11285 PF00107 Zinc-binding dehydrogenase E3399_RS11285 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS11290 PF03949 Malic enzyme, NAD binding domain E3399_RS11290 PF00390 Malic enzyme, N-terminal domain E3399_RS11295 PF08136 30S ribosomal protein subunit S22 family E3399_RS11300 PF10684 Putative biofilm-dependent modulation protein E3399_RS11305 PF02566 OsmC-like protein E3399_RS11310 PF06411 HdeA/HdeB family E3399_RS11320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3399_RS11320 PF11941 Domain of unknown function (DUF3459) E3399_RS11320 PF00128 Alpha amylase, catalytic domain E3399_RS11325 PF00128 Alpha amylase, catalytic domain E3399_RS11330 PF00128 Alpha amylase, catalytic domain E3399_RS11330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E3399_RS11335 PF00155 Aminotransferase class I and II E3399_RS11340 PF03553 Na+/H+ antiporter family E3399_RS11345 PF00356 Bacterial regulatory proteins, lacI family E3399_RS11390 PF01042 Endoribonuclease L-PSP E3399_RS11395 PF02547 Queuosine biosynthesis protein E3399_RS11405 PF01494 FAD binding domain E3399_RS11410 PF07690 Major Facilitator Superfamily E3399_RS11420 PF07690 Major Facilitator Superfamily E3399_RS11425 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS11425 PF00107 Zinc-binding dehydrogenase E3399_RS11430 PF07729 FCD domain E3399_RS11430 PF00392 Bacterial regulatory proteins, gntR family E3399_RS11440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E3399_RS11440 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E3399_RS11445 PF00374 Nickel-dependent hydrogenase E3399_RS11450 PF01292 Prokaryotic cytochrome b561 E3399_RS11455 PF01750 Hydrogenase maturation protease E3399_RS11460 PF01455 HupF/HypC family E3399_RS11470 PF04809 HupH hydrogenase expression protein, C-terminal conserved region E3399_RS11480 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E3399_RS11485 PF00267 Gram-negative porin E3399_RS11495 PF01062 Bestrophin, RFP-TM, chloride channel E3399_RS11500 PF13811 Domain of unknown function (DUF4186) E3399_RS11505 PF04960 Glutaminase E3399_RS11510 PF00171 Aldehyde dehydrogenase family E3399_RS11515 PF03466 LysR substrate binding domain E3399_RS11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS11520 PF07690 Major Facilitator Superfamily E3399_RS11525 PF01914 MarC family integral membrane protein E3399_RS11530 PF01047 MarR family E3399_RS11535 PF12833 Helix-turn-helix domain E3399_RS11540 PF13999 MarB protein E3399_RS11545 PF00892 EamA-like transporter family E3399_RS11550 PF07690 Major Facilitator Superfamily E3399_RS11560 PF04076 Bacterial OB fold (BOF) protein E3399_RS11565 PF02464 Competence-damaged protein E3399_RS11570 PF10685 Stress-induced bacterial acidophilic repeat motif E3399_RS11580 PF01432 Peptidase family M3 E3399_RS11585 PF00106 short chain dehydrogenase E3399_RS11590 PF00392 Bacterial regulatory proteins, gntR family E3399_RS11590 PF07729 FCD domain E3399_RS11595 PF14001 YdfZ protein E3399_RS11600 PF08125 Mannitol dehydrogenase C-terminal domain E3399_RS11600 PF01232 Mannitol dehydrogenase Rossmann domain E3399_RS11605 PF07690 Major Facilitator Superfamily E3399_RS11605 PF00083 Sugar (and other) transporter E3399_RS11610 PF00107 Zinc-binding dehydrogenase E3399_RS11610 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS11615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3399_RS11615 PF13378 Enolase C-terminal domain-like E3399_RS11620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E3399_RS11625 PF06932 Protein of unknown function (DUF1283) E3399_RS11630 PF13302 Acetyltransferase (GNAT) domain E3399_RS11635 PF06788 Uncharacterised protein family (UPF0257) E3399_RS11640 PF06649 Protein of unknown function (DUF1161) E3399_RS11645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS11645 PF01568 Molydopterin dinucleotide binding domain E3399_RS11645 PF00384 Molybdopterin oxidoreductase E3399_RS11650 PF01568 Molydopterin dinucleotide binding domain E3399_RS11650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS11650 PF00384 Molybdopterin oxidoreductase E3399_RS11655 PF12800 4Fe-4S binding domain E3399_RS11655 PF13247 4Fe-4S dicluster domain E3399_RS11660 PF04976 DMSO reductase anchor subunit (DmsC) E3399_RS11665 PF02613 Nitrate reductase delta subunit E3399_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS11675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3399_RS11680 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS11685 PF00571 CBS domain E3399_RS11685 PF00005 ABC transporter E3399_RS11690 PF00654 Voltage gated chloride channel E3399_RS11700 PF00480 ROK family E3399_RS11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS11705 PF03466 LysR substrate binding domain E3399_RS11710 PF07690 Major Facilitator Superfamily E3399_RS11720 PF00089 Trypsin E3399_RS11725 PF00893 Small Multidrug Resistance protein E3399_RS11730 PF00893 Small Multidrug Resistance protein E3399_RS11740 PF01594 AI-2E family transporter E3399_RS11745 PF02233 NAD(P) transhydrogenase beta subunit E3399_RS11750 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E3399_RS11750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E3399_RS11750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E3399_RS11755 PF07338 Protein of unknown function (DUF1471) E3399_RS11760 PF13520 Amino acid permease E3399_RS11765 PF06942 GlpM protein E3399_RS11770 PF00072 Response regulator receiver domain E3399_RS11770 PF00486 Transcriptional regulatory protein, C terminal E3399_RS11780 PF00267 Gram-negative porin E3399_RS11785 PF01979 Amidohydrolase family E3399_RS11785 PF13382 Adenine deaminase C-terminal domain E3399_RS11790 PF00672 HAMP domain E3399_RS11790 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS11795 PF05472 DNA replication terminus site-binding protein (Ter protein) E3399_RS11800 PF10415 Fumarase C C-terminus E3399_RS11800 PF00206 Lyase E3399_RS11805 PF05683 Fumarase C-terminus E3399_RS11805 PF05681 Fumarate hydratase (Fumerase) E3399_RS11810 PF01238 Phosphomannose isomerase type I E3399_RS11815 PF06097 Bacterial protein of unknown function (DUF945) E3399_RS11825 PF00155 Aminotransferase class I and II E3399_RS11830 PF00962 Adenosine/AMP deaminase E3399_RS11835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3399_RS11835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS11845 PF05321 Haemolysin expression modulating protein E3399_RS11850 PF10754 Protein of unknown function (DUF2569) E3399_RS11855 PF02508 Rnf-Nqr subunit, membrane protein E3399_RS11860 PF04060 Putative Fe-S cluster E3399_RS11865 PF12838 4Fe-4S dicluster domain E3399_RS11865 PF13375 RnfC Barrel sandwich hybrid domain E3399_RS11865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E3399_RS11865 PF10531 SLBB domain E3399_RS11870 PF03116 NQR2, RnfD, RnfE family E3399_RS11875 PF04205 FMN-binding domain E3399_RS11880 PF02508 Rnf-Nqr subunit, membrane protein E3399_RS11885 PF00633 Helix-hairpin-helix motif E3399_RS11885 PF00730 HhH-GPD superfamily base excision DNA repair protein E3399_RS11885 PF10576 Iron-sulfur binding domain of endonuclease III E3399_RS11890 PF00854 POT family E3399_RS11895 PF00043 Glutathione S-transferase, C-terminal domain E3399_RS11895 PF02798 Glutathione S-transferase, N-terminal domain E3399_RS11900 PF08543 Phosphomethylpyrimidine kinase E3399_RS11905 PF00579 tRNA synthetases class I (W and Y) E3399_RS11905 PF01479 S4 domain E3399_RS11910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E3399_RS11910 PF01243 Pyridoxamine 5'-phosphate oxidase E3399_RS11915 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme E3399_RS11920 PF03702 Anhydro-N-acetylmuramic acid kinase E3399_RS11925 PF05433 Glycine zipper 2TM domain E3399_RS11930 PF01047 MarR family E3399_RS11935 PF07869 Protein of unknown function (DUF1656) E3399_RS11940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS11940 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS11945 PF04632 Fusaric acid resistance protein family E3399_RS11950 PF00080 Copper/zinc superoxide dismutase (SODC) E3399_RS11955 PF00248 Aldo/keto reductase family E3399_RS11960 PF06945 Protein of unknown function (DUF1289) E3399_RS11965 PF00440 Bacterial regulatory proteins, tetR family E3399_RS11965 PF16925 Tetracyclin repressor-like, C-terminal domain E3399_RS11970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3399_RS11975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3399_RS11980 PF00929 Exonuclease E3399_RS11990 PF00462 Glutaredoxin E3399_RS11995 PF00877 NlpC/P60 family E3399_RS12000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3399_RS12000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3399_RS12010 PF00356 Bacterial regulatory proteins, lacI family E3399_RS12015 PF03466 LysR substrate binding domain E3399_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS12020 PF07690 Major Facilitator Superfamily E3399_RS12030 PF00677 Lumazine binding domain E3399_RS12035 PF01554 MatE E3399_RS12050 PF01312 FlhB HrpN YscU SpaS Family E3399_RS12055 PF01311 Bacterial export proteins, family 1 E3399_RS12060 PF01313 Bacterial export proteins, family 3 E3399_RS12065 PF00813 FliP family E3399_RS12070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3399_RS12085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS12085 PF18269 T3SS EscN ATPase C-terminal domain E3399_RS12090 PF00771 FHIPEP family E3399_RS12100 PF07201 HrpJ-like domain E3399_RS12115 PF01514 Secretory protein of YscJ/FliF family E3399_RS12155 PF05802 Enterobacterial EspB protein E3399_RS12160 PF04888 Secretion system effector C (SseC) like family E3399_RS12170 PF03433 EspA-like secreted protein E3399_RS12190 PF00263 Bacterial type II and III secretion system protein E3399_RS12190 PF03958 Bacterial type II/III secretion system short domain E3399_RS12200 PF01627 Hpt domain E3399_RS12200 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS12200 PF00672 HAMP domain E3399_RS12200 PF00072 Response regulator receiver domain E3399_RS12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS12200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E3399_RS12205 PF00196 Bacterial regulatory proteins, luxR family E3399_RS12205 PF00072 Response regulator receiver domain E3399_RS12210 PF13411 MerR HTH family regulatory protein E3399_RS12215 PF08349 Protein of unknown function (DUF1722) E3399_RS12220 PF10965 Protein of unknown function (DUF2767) E3399_RS12225 PF00196 Bacterial regulatory proteins, luxR family E3399_RS12225 PF00072 Response regulator receiver domain E3399_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS12230 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS12235 PF13247 4Fe-4S dicluster domain E3399_RS12240 PF03916 Polysulphide reductase, NrfD E3399_RS12245 PF01568 Molydopterin dinucleotide binding domain E3399_RS12245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS12245 PF00384 Molybdopterin oxidoreductase E3399_RS12250 PF00294 pfkB family carbohydrate kinase E3399_RS12260 PF00561 alpha/beta hydrolase fold E3399_RS12265 PF00324 Amino acid permease E3399_RS12270 PF00224 Pyruvate kinase, barrel domain E3399_RS12270 PF02887 Pyruvate kinase, alpha/beta domain E3399_RS12275 PF04728 Lipoprotein leucine-zipper E3399_RS12280 PF04728 Lipoprotein leucine-zipper E3399_RS12285 PF04728 Lipoprotein leucine-zipper E3399_RS12290 PF01476 LysM domain E3399_RS12290 PF03734 L,D-transpeptidase catalytic domain E3399_RS12290 PF17969 L,D-transpeptidase C-terminal domain E3399_RS12295 PF02657 Fe-S metabolism associated domain E3399_RS12300 PF00266 Aminotransferase class-V E3399_RS12305 PF01458 Uncharacterized protein family (UPF0051) E3399_RS12310 PF00005 ABC transporter E3399_RS12315 PF01458 Uncharacterized protein family (UPF0051) E3399_RS12320 PF01521 Iron-sulphur cluster biosynthesis E3399_RS12325 PF00375 Sodium:dicarboxylate symporter family E3399_RS12330 PF15930 Domain of unknown function E3399_RS12335 PF03061 Thioesterase superfamily E3399_RS12340 PF02913 FAD linked oxidases, C-terminal domain E3399_RS12340 PF13183 4Fe-4S dicluster domain E3399_RS12340 PF01565 FAD binding domain E3399_RS12345 PF01594 AI-2E family transporter E3399_RS12355 PF08965 Domain of unknown function (DUF1870) E3399_RS12360 PF07690 Major Facilitator Superfamily E3399_RS12365 PF07690 Major Facilitator Superfamily E3399_RS12370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3399_RS12370 PF08501 Shikimate dehydrogenase substrate binding domain E3399_RS12375 PF01487 Type I 3-dehydroquinase E3399_RS12380 PF01144 Coenzyme A transferase E3399_RS12385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3399_RS12385 PF02770 Acyl-CoA dehydrogenase, middle domain E3399_RS12385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3399_RS12390 PF12833 Helix-turn-helix domain E3399_RS12390 PF02311 AraC-like ligand binding domain E3399_RS12395 PF01012 Electron transfer flavoprotein domain E3399_RS12400 PF01012 Electron transfer flavoprotein domain E3399_RS12400 PF00766 Electron transfer flavoprotein FAD-binding domain E3399_RS12405 PF01494 FAD binding domain E3399_RS12415 PF00501 AMP-binding enzyme E3399_RS12415 PF13193 AMP-binding enzyme C-terminal domain E3399_RS12420 PF02896 PEP-utilising enzyme, TIM barrel domain E3399_RS12420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E3399_RS12420 PF00391 PEP-utilising enzyme, mobile domain E3399_RS12425 PF03618 Kinase/pyrophosphorylase E3399_RS12430 PF00793 DAHP synthetase I family E3399_RS12435 PF10636 Hemin uptake protein hemP E3399_RS12440 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E3399_RS12445 PF00563 EAL domain E3399_RS12450 PF00877 NlpC/P60 family E3399_RS12455 PF00005 ABC transporter E3399_RS12460 PF00255 Glutathione peroxidase E3399_RS12465 PF01032 FecCD transport family E3399_RS12470 PF00216 Bacterial DNA-binding protein E3399_RS12475 PF03147 Ferredoxin-fold anticodon binding domain E3399_RS12475 PF03484 tRNA synthetase B5 domain E3399_RS12475 PF03483 B3/4 domain E3399_RS12475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E3399_RS12475 PF01588 Putative tRNA binding domain E3399_RS12480 PF01409 tRNA synthetases class II core domain (F) E3399_RS12480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E3399_RS12490 PF00453 Ribosomal protein L20 E3399_RS12495 PF01632 Ribosomal protein L35 E3399_RS12500 PF00707 Translation initiation factor IF-3, C-terminal domain E3399_RS12500 PF05198 Translation initiation factor IF-3, N-terminal domain E3399_RS12505 PF03129 Anticodon binding domain E3399_RS12505 PF02824 TGS domain E3399_RS12505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3399_RS12505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3399_RS12510 PF01223 DNA/RNA non-specific endonuclease E3399_RS12525 PF04338 Protein of unknown function, DUF481 E3399_RS12530 PF00294 pfkB family carbohydrate kinase E3399_RS12535 PF11080 Endoribonuclease GhoS E3399_RS12540 PF03881 Fructosamine kinase E3399_RS12545 PF14002 YniB-like protein E3399_RS12550 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS12555 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3399_RS12560 PF00375 Sodium:dicarboxylate symporter family E3399_RS12565 PF10729 Cell division activator CedA E3399_RS12570 PF06628 Catalase-related immune-responsive E3399_RS12570 PF18011 C-terminal domain found in long catalases E3399_RS12570 PF00199 Catalase E3399_RS12575 PF04794 YdjC-like protein E3399_RS12580 PF02056 Family 4 glycosyl hydrolase E3399_RS12580 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3399_RS12585 PF07883 Cupin domain E3399_RS12585 PF12833 Helix-turn-helix domain E3399_RS12590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E3399_RS12595 PF02378 Phosphotransferase system, EIIC E3399_RS12600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS12610 PF04355 SmpA / OmlA family E3399_RS12615 PF02540 NAD synthase E3399_RS12625 PF07813 LTXXQ motif family protein E3399_RS12630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E3399_RS12635 PF04996 Succinylarginine dihydrolase E3399_RS12640 PF00171 Aldehyde dehydrogenase family E3399_RS12645 PF04958 Arginine N-succinyltransferase beta subunit E3399_RS12650 PF00202 Aminotransferase class-III E3399_RS12655 PF03372 Endonuclease/Exonuclease/phosphatase family E3399_RS12660 PF00293 NUDIX domain E3399_RS12665 PF07383 Protein of unknown function (DUF1496) E3399_RS12670 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3399_RS12670 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3399_RS12675 PF01751 Toprim domain E3399_RS12675 PF01131 DNA topoisomerase E3399_RS12680 PF02769 AIR synthase related protein, C-terminal domain E3399_RS12680 PF00586 AIR synthase related protein, N-terminal domain E3399_RS12685 PF00881 Nitroreductase family E3399_RS12690 PF01343 Peptidase family S49 E3399_RS12695 PF00710 Asparaginase, N-terminal E3399_RS12695 PF17763 Glutaminase/Asparaginase C-terminal domain E3399_RS12700 PF00857 Isochorismatase family E3399_RS12705 PF00083 Sugar (and other) transporter E3399_RS12710 PF08220 DeoR-like helix-turn-helix domain E3399_RS12710 PF00455 DeoR C terminal sensor domain E3399_RS12715 PF00248 Aldo/keto reductase family E3399_RS12720 PF00294 pfkB family carbohydrate kinase E3399_RS12725 PF01116 Fructose-bisphosphate aldolase class-II E3399_RS12730 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS12730 PF00107 Zinc-binding dehydrogenase E3399_RS12735 PF00083 Sugar (and other) transporter E3399_RS12740 PF00107 Zinc-binding dehydrogenase E3399_RS12740 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS12745 PF07023 Protein of unknown function (DUF1315) E3399_RS12750 PF01641 SelR domain E3399_RS12755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3399_RS12755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3399_RS12760 PF01263 Aldose 1-epimerase E3399_RS12765 PF00248 Aldo/keto reductase family E3399_RS12770 PF04055 Radical SAM superfamily E3399_RS12770 PF13186 Iron-sulfur cluster-binding domain E3399_RS12775 PF06629 MltA-interacting protein MipA E3399_RS12780 PF06798 PrkA serine protein kinase C-terminal domain E3399_RS12780 PF08298 PrkA AAA domain E3399_RS12785 PF04285 Protein of unknown function (DUF444) E3399_RS12795 PF17155 Gammaproteobacterial periplasmic sensor domain E3399_RS12795 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS12800 PF04073 Aminoacyl-tRNA editing domain E3399_RS12810 PF04284 Protein of unknown function (DUF441) E3399_RS12815 PF12833 Helix-turn-helix domain E3399_RS12815 PF02311 AraC-like ligand binding domain E3399_RS12820 PF07690 Major Facilitator Superfamily E3399_RS12825 PF04343 Protein of unknown function, DUF488 E3399_RS12835 PF03891 Domain of unknown function (DUF333) E3399_RS12845 PF04226 Transglycosylase associated protein E3399_RS12860 PF08956 Domain of unknown function (DUF1869) E3399_RS12865 PF09313 Domain of unknown function (DUF1971) E3399_RS12870 PF01810 LysE type translocator E3399_RS12875 PF01817 Chorismate mutase type II E3399_RS12890 PF09278 MerR, DNA binding E3399_RS12890 PF00376 MerR family regulatory protein E3399_RS12900 PF13427 Domain of unknown function (DUF4111) E3399_RS12900 PF01909 Nucleotidyltransferase domain E3399_RS12905 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment E3399_RS12920 PF00924 Mechanosensitive ion channel E3399_RS12925 PF00005 ABC transporter E3399_RS12930 PF00005 ABC transporter E3399_RS12935 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS12935 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS12940 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS12945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS12955 PF01292 Prokaryotic cytochrome b561 E3399_RS12970 PF00011 Hsp20/alpha crystallin family E3399_RS12995 PF06316 Enterobacterial Ail/Lom protein E3399_RS13010 PF00313 'Cold-shock' DNA-binding domain E3399_RS13015 PF00652 Ricin-type beta-trefoil lectin domain E3399_RS13020 PF06183 DinI-like family E3399_RS13040 PF00180 Isocitrate/isopropylmalate dehydrogenase E3399_RS13045 PF00849 RNA pseudouridylate synthase E3399_RS13055 PF00293 NUDIX domain E3399_RS13065 PF04356 Protein of unknown function (DUF489) E3399_RS13070 PF08328 Adenylosuccinate lyase C-terminal E3399_RS13070 PF00206 Lyase E3399_RS13075 PF00486 Transcriptional regulatory protein, C terminal E3399_RS13075 PF00072 Response regulator receiver domain E3399_RS13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS13080 PF08918 PhoQ Sensor E3399_RS13085 PF08007 Cupin superfamily protein E3399_RS13095 PF01546 Peptidase family M20/M25/M40 E3399_RS13095 PF07687 Peptidase dimerisation domain E3399_RS13100 PF00005 ABC transporter E3399_RS13100 PF08402 TOBE domain E3399_RS13105 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS13110 PF06767 Sif protein E3399_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS13120 PF13416 Bacterial extracellular solute-binding protein E3399_RS13125 PF02146 Sir2 family E3399_RS13130 PF00480 ROK family E3399_RS13135 PF12704 MacB-like periplasmic core domain E3399_RS13135 PF02687 FtsX-like permease family E3399_RS13140 PF00005 ABC transporter E3399_RS13145 PF02687 FtsX-like permease family E3399_RS13145 PF12704 MacB-like periplasmic core domain E3399_RS13150 PF17757 UvrB interaction domain E3399_RS13150 PF02559 CarD-like/TRCF domain E3399_RS13150 PF00270 DEAD/DEAH box helicase E3399_RS13150 PF03461 TRCF domain E3399_RS13150 PF00271 Helicase conserved C-terminal domain E3399_RS13155 PF01476 LysM domain E3399_RS13155 PF03734 L,D-transpeptidase catalytic domain E3399_RS13155 PF17969 L,D-transpeptidase C-terminal domain E3399_RS13160 PF07338 Protein of unknown function (DUF1471) E3399_RS13165 PF00440 Bacterial regulatory proteins, tetR family E3399_RS13170 PF05433 Glycine zipper 2TM domain E3399_RS13175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS13180 PF05728 Uncharacterised protein family (UPF0227) E3399_RS13185 PF00933 Glycosyl hydrolase family 3 N terminal domain E3399_RS13190 PF01636 Phosphotransferase enzyme family E3399_RS13195 PF13036 Peptidoglycan-synthase activator LpoB E3399_RS13200 PF07233 Protein of unknown function (DUF1425) E3399_RS13205 PF01230 HIT domain E3399_RS13210 PF00593 TonB dependent receptor E3399_RS13210 PF07715 TonB-dependent Receptor Plug Domain E3399_RS13215 PF00367 phosphotransferase system, EIIB E3399_RS13215 PF02378 Phosphotransferase system, EIIC E3399_RS13220 PF01026 TatD related DNase E3399_RS13225 PF09115 DNA polymerase III, delta subunit, C terminal E3399_RS13230 PF02223 Thymidylate kinase E3399_RS13235 PF02618 YceG-like family E3399_RS13240 PF01063 Amino-transferase class IV E3399_RS13245 PF02801 Beta-ketoacyl synthase, C-terminal domain E3399_RS13245 PF00109 Beta-ketoacyl synthase, N-terminal domain E3399_RS13250 PF00550 Phosphopantetheine attachment site E3399_RS13260 PF00698 Acyl transferase domain E3399_RS13265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E3399_RS13265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E3399_RS13270 PF02504 Fatty acid synthesis protein E3399_RS13275 PF01783 Ribosomal L32p protein family E3399_RS13280 PF02620 Large ribosomal RNA subunit accumulation protein YceD E3399_RS13285 PF02545 Maf-like protein E3399_RS13300 PF00849 RNA pseudouridylate synthase E3399_RS13300 PF01479 S4 domain E3399_RS13310 PF12111 Polyribonucleotide phosphorylase C terminal E3399_RS13310 PF10150 Ribonuclease E/G family E3399_RS13310 PF00575 S1 RNA binding domain E3399_RS13315 PF00669 Bacterial flagellin N-terminal helical region E3399_RS13320 PF00460 Flagella basal body rod protein E3399_RS13320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3399_RS13325 PF10135 Rod binding protein E3399_RS13325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3399_RS13330 PF02119 Flagellar P-ring protein E3399_RS13335 PF02107 Flagellar L-ring protein E3399_RS13340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3399_RS13340 PF00460 Flagella basal body rod protein E3399_RS13345 PF00460 Flagella basal body rod protein E3399_RS13345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3399_RS13350 PF00460 Flagella basal body rod protein E3399_RS13350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3399_RS13350 PF07559 Flagellar basal body protein FlaE E3399_RS13355 PF13860 FlgD Ig-like domain E3399_RS13355 PF13861 FlgD Tudor-like domain E3399_RS13355 PF03963 Flagellar hook capping protein - N-terminal region E3399_RS13360 PF00460 Flagella basal body rod protein E3399_RS13360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3399_RS13365 PF00460 Flagella basal body rod protein E3399_RS13370 PF13144 Chaperone for flagella basal body P-ring formation E3399_RS13375 PF04316 Anti-sigma-28 factor, FlgM E3399_RS13380 PF05130 FlgN protein E3399_RS13385 PF03023 Lipid II flippase MurJ E3399_RS13390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS13395 PF04337 Protein of unknown function, DUF480 E3399_RS13400 PF13302 Acetyltransferase (GNAT) domain E3399_RS13405 PF07690 Major Facilitator Superfamily E3399_RS13410 PF04399 Glutaredoxin 2, C terminal domain E3399_RS13410 PF13417 Glutathione S-transferase, N-terminal domain E3399_RS13415 PF07273 Protein of unknown function (DUF1439) E3399_RS13420 PF01979 Amidohydrolase family E3399_RS13425 PF06183 DinI-like family E3399_RS13430 PF13991 BssS protein family E3399_RS13435 PF01266 FAD dependent oxidoreductase E3399_RS13440 PF10968 Protein of unknown function (DUF2770) E3399_RS13445 PF01292 Prokaryotic cytochrome b561 E3399_RS13450 PF04264 YceI-like domain E3399_RS13455 PF12368 Rhodanase C-terminal E3399_RS13455 PF00581 Rhodanese-like domain E3399_RS13455 PF17773 UPF0176 acylphosphatase like domain E3399_RS13460 PF03279 Bacterial lipid A biosynthesis acyltransferase E3399_RS13465 PF07690 Major Facilitator Superfamily E3399_RS13470 PF13984 MsyB protein E3399_RS13475 PF07119 Protein of unknown function (DUF1375) E3399_RS13480 PF00535 Glycosyl transferase family 2 E3399_RS13485 PF04349 Periplasmic glucan biosynthesis protein, MdoG E3399_RS13495 PF01757 Acyltransferase family E3399_RS13500 PF13091 PLD-like domain E3399_RS13505 PF01661 Macro domain E3399_RS13515 PF10610 Thin aggregative fimbriae synthesis protein E3399_RS13520 PF07012 Curlin associated repeat E3399_RS13525 PF07012 Curlin associated repeat E3399_RS13530 PF00196 Bacterial regulatory proteins, luxR family E3399_RS13535 PF10627 Curli assembly protein CsgE E3399_RS13540 PF10614 Type VIII secretion system (T8SS), CsgF protein E3399_RS13545 PF03783 Curli production assembly/transport component CsgG E3399_RS13550 PF06496 Protein of unknown function (DUF1097) E3399_RS13555 PF02613 Nitrate reductase delta subunit E3399_RS13560 PF02811 PHP domain E3399_RS13565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3399_RS13580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3399_RS13580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS13585 PF07690 Major Facilitator Superfamily E3399_RS13590 PF06178 Oligogalacturonate-specific porin protein (KdgM) E3399_RS13595 PF01344 Kelch motif E3399_RS13600 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E3399_RS13605 PF00474 Sodium:solute symporter family E3399_RS13610 PF01418 Helix-turn-helix domain, rpiR family E3399_RS13610 PF01380 SIS domain E3399_RS13615 PF02562 PhoH-like protein E3399_RS13620 PF00474 Sodium:solute symporter family E3399_RS13625 PF00171 Aldehyde dehydrogenase family E3399_RS13625 PF01619 Proline dehydrogenase E3399_RS13625 PF14850 DNA-binding domain of Proline dehydrogenase E3399_RS13625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E3399_RS13635 PF00440 Bacterial regulatory proteins, tetR family E3399_RS13635 PF08362 YcdC-like protein, C-terminal region E3399_RS13640 PF10685 Stress-induced bacterial acidophilic repeat motif E3399_RS13645 PF03358 NADPH-dependent FMN reductase E3399_RS13650 PF13993 YccJ-like protein E3399_RS13655 PF00328 Histidine phosphatase superfamily (branch 2) E3399_RS13660 PF00578 AhpC/TSA family E3399_RS13665 PF06965 Na+/H+ antiporter 1 E3399_RS13665 PF13462 Thioredoxin E3399_RS13670 PF11412 Disulphide bond corrector protein DsbC E3399_RS13670 PF02683 Cytochrome C biogenesis protein transmembrane region E3399_RS13670 PF13098 Thioredoxin-like domain E3399_RS13680 PF00226 DnaJ domain E3399_RS13680 PF01556 DnaJ C terminal domain E3399_RS13700 PF12706 Beta-lactamase superfamily domain E3399_RS13710 PF07690 Major Facilitator Superfamily E3399_RS13715 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS13720 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3399_RS13725 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase E3399_RS13730 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E3399_RS13735 PF00171 Aldehyde dehydrogenase family E3399_RS13740 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3399_RS13745 PF01047 MarR family E3399_RS13750 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal E3399_RS13750 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal E3399_RS13755 PF01613 Flavin reductase like domain E3399_RS13760 PF00576 HIUase/Transthyretin family E3399_RS13765 PF00486 Transcriptional regulatory protein, C terminal E3399_RS13765 PF00072 Response regulator receiver domain E3399_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS13770 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS13775 PF03577 Peptidase family C69 E3399_RS13785 PF13132 Domain of unknown function (DUF3950) E3399_RS13790 PF05925 Enterobacterial virulence protein IpgD E3399_RS13795 PF07824 Type III secretion chaperone domain E3399_RS13805 PF00805 Pentapeptide repeats (8 copies) E3399_RS13820 PF01027 Inhibitor of apoptosis-promoting Bax1 E3399_RS13825 PF04358 DsrC like protein E3399_RS13830 PF00708 Acylphosphatase E3399_RS13835 PF12833 Helix-turn-helix domain E3399_RS13840 PF01161 Phosphatidylethanolamine-binding protein E3399_RS13845 PF10672 S-adenosylmethionine-dependent methyltransferase E3399_RS13845 PF17785 PUA-like domain E3399_RS13850 PF08755 Hemimethylated DNA-binding protein YccV like E3399_RS13855 PF13380 CoA binding domain E3399_RS13860 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) E3399_RS13865 PF02142 MGS-like domain E3399_RS13870 PF00580 UvrD/REP helicase N-terminal domain E3399_RS13870 PF13361 UvrD-like helicase C-terminal domain E3399_RS13870 PF12462 DNA helicase IV / RNA helicase N terminal E3399_RS13875 PF03733 Inner membrane component domain E3399_RS13880 PF12805 FUSC-like inner membrane protein yccS E3399_RS13885 PF04993 TfoX N-terminal domain E3399_RS13885 PF04994 TfoX C-terminal domain E3399_RS13890 PF03846 Cell division inhibitor SulA E3399_RS13895 PF00691 OmpA family E3399_RS13895 PF01389 OmpA-like transmembrane domain E3399_RS13900 PF06303 MatP N-terminal domain E3399_RS13900 PF17414 MatP C-terminal ribbon-helix-helix domain E3399_RS13905 PF13654 AAA domain E3399_RS13905 PF05362 Lon protease (S16) C-terminal proteolytic domain E3399_RS13910 PF07977 FabA-like domain E3399_RS13915 PF04957 Ribosome modulation factor E3399_RS13920 PF03886 ABC-type transport auxiliary lipoprotein component E3399_RS13925 PF02470 MlaD protein E3399_RS13930 PF04403 Paraquat-inducible protein A E3399_RS13935 PF00005 ABC transporter E3399_RS13935 PF16326 ABC transporter C-terminal domain E3399_RS13935 PF12848 ABC transporter E3399_RS13940 PF01170 Putative RNA methylase family UPF0020 E3399_RS13940 PF02926 THUMP domain E3399_RS13940 PF10672 S-adenosylmethionine-dependent methyltransferase E3399_RS13945 PF00111 2Fe-2S iron-sulfur cluster binding domain E3399_RS13945 PF03473 MOSC domain E3399_RS13945 PF03476 MOSC N-terminal beta barrel domain E3399_RS13950 PF07126 Cell-division protein ZapC E3399_RS13955 PF01180 Dihydroorotate dehydrogenase E3399_RS13960 PF01433 Peptidase family M1 domain E3399_RS13960 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E3399_RS13960 PF11940 Domain of unknown function (DUF3458) Ig-like fold E3399_RS13965 PF06183 DinI-like family E3399_RS13985 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3399_RS13990 PF08400 Prophage tail fibre N-terminal E3399_RS13990 PF07484 Phage Tail Collar Domain E3399_RS13990 PF03335 Phage tail fibre repeat E3399_RS14055 PF01385 Probable transposase E3399_RS14055 PF12323 Helix-turn-helix domain E3399_RS14055 PF07282 Putative transposase DNA-binding domain E3399_RS14070 PF03864 Phage major capsid protein E E3399_RS14080 PF01343 Peptidase family S49 E3399_RS14090 PF02831 gpW E3399_RS14095 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E3399_RS14100 PF07471 Phage DNA packaging protein Nu1 E3399_RS14105 PF04151 Bacterial pre-peptidase C-terminal domain E3399_RS14110 PF03245 Bacteriophage Rz lysis protein E3399_RS14140 PF03589 Antitermination protein E3399_RS14180 PF01695 IstB-like ATP binding protein E3399_RS14225 PF06630 Enterobacterial exodeoxyribonuclease VIII E3399_RS14225 PF12684 PDDEXK-like domain of unknown function (DUF3799) E3399_RS14245 PF12167 Arm DNA-binding domain E3399_RS14245 PF00589 Phage integrase family E3399_RS14250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E3399_RS14250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E3399_RS14255 PF01235 Sodium:alanine symporter family E3399_RS14260 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS14270 PF01037 Lrp/AsnC ligand binding domain E3399_RS14270 PF13404 AsnC-type helix-turn-helix domain E3399_RS14275 PF01336 OB-fold nucleic acid binding domain E3399_RS14275 PF00152 tRNA synthetases class II (D, K and N) E3399_RS14280 PF00267 Gram-negative porin E3399_RS14285 PF00155 Aminotransferase class I and II E3399_RS14290 PF00753 Metallo-beta-lactamase superfamily E3399_RS14295 PF05951 Bacterial protein of unknown function (DUF882) E3399_RS14300 PF01471 Putative peptidoglycan binding domain E3399_RS14300 PF03734 L,D-transpeptidase catalytic domain E3399_RS14310 PF04310 MukB N-terminal E3399_RS14310 PF16330 MukB hinge domain E3399_RS14315 PF04288 MukE-like family E3399_RS14320 PF17193 MukF C-terminal domain E3399_RS14320 PF17192 MukF middle domain E3399_RS14320 PF03882 MukF winged-helix domain E3399_RS14325 PF13847 Methyltransferase domain E3399_RS14330 PF02698 DUF218 domain E3399_RS14335 PF01636 Phosphotransferase enzyme family E3399_RS14345 PF02348 Cytidylyltransferase E3399_RS14350 PF03966 Trm112p-like protein E3399_RS14355 PF06224 Winged helix DNA-binding domain E3399_RS14360 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E3399_RS14365 PF00664 ABC transporter transmembrane region E3399_RS14365 PF00005 ABC transporter E3399_RS14370 PF00753 Metallo-beta-lactamase superfamily E3399_RS14370 PF03772 Competence protein E3399_RS14375 PF00216 Bacterial DNA-binding protein E3399_RS14380 PF00575 S1 RNA binding domain E3399_RS14385 PF02224 Cytidylate kinase E3399_RS14390 PF01435 Peptidase family M48 E3399_RS14395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3399_RS14400 PF00266 Aminotransferase class-V E3399_RS14405 PF04239 Protein of unknown function (DUF421) E3399_RS14410 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E3399_RS14410 PF18381 YcaO cyclodehydratase C-terminal domain E3399_RS14415 PF01226 Formate/nitrite transporter E3399_RS14425 PF11047 Salmonella outer protein D E3399_RS14435 PF04055 Radical SAM superfamily E3399_RS14440 PF13520 Amino acid permease E3399_RS14445 PF07690 Major Facilitator Superfamily E3399_RS14450 PF04976 DMSO reductase anchor subunit (DmsC) E3399_RS14455 PF13247 4Fe-4S dicluster domain E3399_RS14455 PF12800 4Fe-4S binding domain E3399_RS14460 PF01568 Molydopterin dinucleotide binding domain E3399_RS14460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS14460 PF00384 Molybdopterin oxidoreductase E3399_RS14465 PF02403 Seryl-tRNA synthetase N-terminal domain E3399_RS14465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3399_RS14470 PF12002 MgsA AAA+ ATPase C terminal E3399_RS14470 PF16193 AAA C-terminal domain E3399_RS14470 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS14475 PF03548 Outer membrane lipoprotein carrier protein LolA E3399_RS14480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E3399_RS14480 PF01580 FtsK/SpoIIIE family E3399_RS14480 PF09397 Ftsk gamma domain E3399_RS14480 PF17854 FtsK alpha domain E3399_RS14485 PF01037 Lrp/AsnC ligand binding domain E3399_RS14490 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS14495 PF00005 ABC transporter E3399_RS14495 PF00664 ABC transporter transmembrane region E3399_RS14500 PF00005 ABC transporter E3399_RS14500 PF00664 ABC transporter transmembrane region E3399_RS14505 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E3399_RS14515 PF01176 Translation initiation factor 1A / IF-1 E3399_RS14520 PF03466 LysR substrate binding domain E3399_RS14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS14525 PF02678 Pirin E3399_RS14525 PF05726 Pirin C-terminal cupin domain E3399_RS14530 PF00857 Isochorismatase family E3399_RS14545 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS14545 PF07724 AAA domain (Cdc48 subfamily) E3399_RS14545 PF10431 C-terminal, D2-small domain, of ClpB protein E3399_RS14545 PF02861 Clp amino terminal domain, pathogenicity island component E3399_RS14545 PF17871 AAA lid domain E3399_RS14550 PF02617 ATP-dependent Clp protease adaptor protein ClpS E3399_RS14555 PF00313 'Cold-shock' DNA-binding domain E3399_RS14560 PF12704 MacB-like periplasmic core domain E3399_RS14560 PF02687 FtsX-like permease family E3399_RS14560 PF00005 ABC transporter E3399_RS14565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS14570 PF04393 Protein of unknown function (DUF535) E3399_RS14575 PF11398 Protein of unknown function (DUF2813) E3399_RS14580 PF03956 Lysine exporter LysO E3399_RS14585 PF03063 Prismane/CO dehydrogenase family E3399_RS14590 PF00970 Oxidoreductase FAD-binding domain E3399_RS14590 PF00111 2Fe-2S iron-sulfur cluster binding domain E3399_RS14590 PF00175 Oxidoreductase NAD-binding domain E3399_RS14595 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS14595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS14595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS14600 PF01212 Beta-eliminating lyase E3399_RS14605 PF13460 NAD(P)H-binding E3399_RS14605 PF11066 Protein of unknown function (DUF2867) E3399_RS14610 PF01370 NAD dependent epimerase/dehydratase family E3399_RS14615 PF01510 N-acetylmuramoyl-L-alanine amidase E3399_RS14620 PF01906 Putative heavy-metal-binding E3399_RS14625 PF12883 Protein of unknown function (DUF3828) E3399_RS14630 PF00005 ABC transporter E3399_RS14635 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS14640 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14645 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS14665 PF03611 PTS system sugar-specific permease component E3399_RS14670 PF05958 tRNA (Uracil-5-)-methyltransferase E3399_RS14675 PF10767 Protein of unknown function (DUF2593) E3399_RS14680 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14685 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14690 PF00005 ABC transporter E3399_RS14690 PF08402 TOBE domain E3399_RS14695 PF13416 Bacterial extracellular solute-binding protein E3399_RS14700 PF10722 Putative bacterial sensory transduction regulator E3399_RS14705 PF08443 RimK-like ATP-grasp domain E3399_RS14705 PF18030 RimK PreATP-grasp domain E3399_RS14710 PF00881 Nitroreductase family E3399_RS14715 PF07214 Protein of unknown function (DUF1418) E3399_RS14720 PF00462 Glutaredoxin E3399_RS14725 PF11045 Putative inner membrane protein of Enterobacteriaceae E3399_RS14730 PF06826 Predicted Permease Membrane Region E3399_RS14730 PF02080 TrkA-C domain E3399_RS14740 PF00440 Bacterial regulatory proteins, tetR family E3399_RS14745 PF07690 Major Facilitator Superfamily E3399_RS14755 PF07690 Major Facilitator Superfamily E3399_RS14760 PF01569 PAP2 superfamily E3399_RS14765 PF08220 DeoR-like helix-turn-helix domain E3399_RS14765 PF00455 DeoR C terminal sensor domain E3399_RS14775 PF00043 Glutathione S-transferase, C-terminal domain E3399_RS14775 PF13417 Glutathione S-transferase, N-terminal domain E3399_RS14780 PF07995 Glucose / Sorbosone dehydrogenase E3399_RS14795 PF03466 LysR substrate binding domain E3399_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS14810 PF02770 Acyl-CoA dehydrogenase, middle domain E3399_RS14810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3399_RS14810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3399_RS14820 PF01012 Electron transfer flavoprotein domain E3399_RS14820 PF00766 Electron transfer flavoprotein FAD-binding domain E3399_RS14825 PF01012 Electron transfer flavoprotein domain E3399_RS14830 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS14835 PF10799 Biofilm formation protein (YliH/bssR) E3399_RS14840 PF00919 Uncharacterized protein family UPF0004 E3399_RS14840 PF04055 Radical SAM superfamily E3399_RS14840 PF18693 TRAM domain E3399_RS14845 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14845 PF12911 N-terminal TM domain of oligopeptide transport permease C E3399_RS14850 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS14860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3399_RS14860 PF00005 ABC transporter E3399_RS14865 PF01112 Asparaginase E3399_RS14870 PF03453 MoeA N-terminal region (domain I and II) E3399_RS14870 PF00994 Probable molybdopterin binding domain E3399_RS14870 PF03454 MoeA C-terminal region (domain IV) E3399_RS14875 PF00899 ThiF family E3399_RS14880 PF04055 Radical SAM superfamily E3399_RS14885 PF02901 Pyruvate formate lyase-like E3399_RS14885 PF01228 Glycine radical E3399_RS14895 PF07350 Protein of unknown function (DUF1479) E3399_RS14900 PF00005 ABC transporter E3399_RS14900 PF12848 ABC transporter E3399_RS14905 PF17969 L,D-transpeptidase C-terminal domain E3399_RS14905 PF03734 L,D-transpeptidase catalytic domain E3399_RS14910 PF03600 Citrate transporter E3399_RS14915 PF01325 Iron dependent repressor, N-terminal DNA binding domain E3399_RS14915 PF02742 Iron dependent repressor, metal binding and dimerisation domain E3399_RS14925 PF00884 Sulfatase E3399_RS14930 PF13505 Outer membrane protein beta-barrel domain E3399_RS14935 PF00892 EamA-like transporter family E3399_RS14940 PF00210 Ferritin-like domain E3399_RS14945 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS14950 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS14955 PF00005 ABC transporter E3399_RS14960 PF00924 Mechanosensitive ion channel E3399_RS14970 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3399_RS14975 PF07338 Protein of unknown function (DUF1471) E3399_RS14980 PF02885 Glycosyl transferase family, helical bundle domain E3399_RS14985 PF06733 DEAD_2 E3399_RS14985 PF13307 Helicase C-terminal domain E3399_RS14990 PF00271 Helicase conserved C-terminal domain E3399_RS14990 PF00270 DEAD/DEAH box helicase E3399_RS14995 PF00440 Bacterial regulatory proteins, tetR family E3399_RS14995 PF09209 Tetracyclin repressor-like, C-terminal domain E3399_RS15000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS15005 PF00005 ABC transporter E3399_RS15020 PF11076 Putative inner membrane protein YbhQ E3399_RS15025 PF03372 Endonuclease/Exonuclease/phosphatase family E3399_RS15030 PF13091 PLD-like domain E3399_RS15035 PF03706 Lysylphosphatidylglycerol synthase TM region E3399_RS15055 PF01027 Inhibitor of apoptosis-promoting Bax1 E3399_RS15060 PF02391 MoaE protein E3399_RS15065 PF02597 ThiS family E3399_RS15070 PF01967 MoaC family E3399_RS15075 PF00994 Probable molybdopterin binding domain E3399_RS15085 PF01933 Uncharacterised protein family UPF0052 E3399_RS15090 PF12468 Type III secretion system leucine rich repeat protein E3399_RS15090 PF14496 C-terminal novel E3 ligase, LRR-interacting E3399_RS15100 PF04851 Type III restriction enzyme, res subunit E3399_RS15100 PF02151 UvrB/uvrC motif E3399_RS15100 PF12344 Ultra-violet resistance protein B E3399_RS15100 PF17757 UvrB interaction domain E3399_RS15100 PF00271 Helicase conserved C-terminal domain E3399_RS15115 PF08241 Methyltransferase domain E3399_RS15120 PF00155 Aminotransferase class I and II E3399_RS15125 PF06968 Biotin and Thiamin Synthesis associated domain E3399_RS15125 PF04055 Radical SAM superfamily E3399_RS15130 PF00202 Aminotransferase class-III E3399_RS15135 PF01161 Phosphatidylethanolamine-binding protein E3399_RS15140 PF00221 Aromatic amino acid lyase E3399_RS15145 PF17391 Urocanase N-terminal domain E3399_RS15145 PF01175 Urocanase Rossmann-like domain E3399_RS15145 PF17392 Urocanase C-terminal domain E3399_RS15150 PF07702 UTRA domain E3399_RS15150 PF00392 Bacterial regulatory proteins, gntR family E3399_RS15155 PF00491 Arginase family E3399_RS15160 PF01979 Amidohydrolase family E3399_RS15165 PF01095 Pectinesterase E3399_RS15170 PF10282 Lactonase, 7-bladed beta-propeller E3399_RS15180 PF03459 TOBE domain E3399_RS15180 PF00005 ABC transporter E3399_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS15195 PF10766 Multidrug efflux pump-associated protein AcrZ E3399_RS15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS15200 PF03459 TOBE domain E3399_RS15205 PF00005 ABC transporter E3399_RS15215 PF16363 GDP-mannose 4,6 dehydratase E3399_RS15220 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E3399_RS15220 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E3399_RS15225 PF08544 GHMP kinases C terminal E3399_RS15225 PF00288 GHMP kinases N terminal domain E3399_RS15225 PF10509 Galactokinase galactose-binding signature E3399_RS15230 PF01263 Aldose 1-epimerase E3399_RS15235 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS15240 PF00005 ABC transporter E3399_RS15245 PF01032 FecCD transport family E3399_RS15250 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E3399_RS15260 PF00364 Biotin-requiring enzyme E3399_RS15260 PF02436 Conserved carboxylase domain E3399_RS15260 PF00682 HMGL-like E3399_RS15265 PF04277 Oxaloacetate decarboxylase, gamma chain E3399_RS15270 PF03600 Citrate transporter E3399_RS15270 PF02080 TrkA-C domain E3399_RS15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS15275 PF03466 LysR substrate binding domain E3399_RS15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS15280 PF03466 LysR substrate binding domain E3399_RS15285 PF05681 Fumarate hydratase (Fumerase) E3399_RS15290 PF05683 Fumarase C-terminus E3399_RS15290 PF05681 Fumarate hydratase (Fumerase) E3399_RS15295 PF00793 DAHP synthetase I family E3399_RS15300 PF13985 YbgS-like protein E3399_RS15305 PF01545 Cation efflux family E3399_RS15310 PF04973 Nicotinamide mononucleotide transporter E3399_RS15315 PF02445 Quinolinate synthetase A protein E3399_RS15345 PF16331 TolA binding protein trimerisation E3399_RS15345 PF13174 Tetratricopeptide repeat E3399_RS15350 PF00691 OmpA family E3399_RS15355 PF04052 TolB amino-terminal domain E3399_RS15355 PF07676 WD40-like Beta Propeller Repeat E3399_RS15360 PF06519 TolA C-terminal E3399_RS15365 PF02472 Biopolymer transport protein ExbD/TolR E3399_RS15370 PF01618 MotA/TolQ/ExbB proton channel family E3399_RS15375 PF03061 Thioesterase superfamily E3399_RS15380 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E3399_RS15385 PF08173 Membrane bound YbgT-like protein E3399_RS15390 PF02322 Cytochrome bd terminal oxidase subunit II E3399_RS15395 PF01654 Cytochrome bd terminal oxidase subunit I E3399_RS15400 PF02629 CoA binding domain E3399_RS15400 PF00549 CoA-ligase E3399_RS15405 PF08442 ATP-grasp domain E3399_RS15405 PF00549 CoA-ligase E3399_RS15410 PF00364 Biotin-requiring enzyme E3399_RS15410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3399_RS15410 PF02817 e3 binding domain E3399_RS15415 PF16870 2-oxoglutarate dehydrogenase C-terminal E3399_RS15415 PF00676 Dehydrogenase E1 component E3399_RS15415 PF02779 Transketolase, pyrimidine binding domain E3399_RS15415 PF16078 2-oxoglutarate dehydrogenase N-terminus E3399_RS15420 PF13085 2Fe-2S iron-sulfur cluster binding domain E3399_RS15425 PF02910 Fumarate reductase flavoprotein C-term E3399_RS15425 PF00890 FAD binding domain E3399_RS15430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E3399_RS15435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E3399_RS15440 PF00285 Citrate synthase, C-terminal domain E3399_RS15445 PF05145 Transition state regulatory protein AbrB E3399_RS15450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E3399_RS15450 PF06827 Zinc finger found in FPG and IleRS E3399_RS15450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E3399_RS15455 PF03746 LamB/YcsF family E3399_RS15460 PF02626 Carboxyltransferase domain, subdomain A and B E3399_RS15465 PF02682 Carboxyltransferase domain, subdomain C and D E3399_RS15470 PF01784 NIF3 (NGG1p interacting factor 3) E3399_RS15475 PF00854 POT family E3399_RS15480 PF00875 DNA photolyase E3399_RS15480 PF03441 FAD binding domain of DNA photolyase E3399_RS15485 PF10725 Protein of unknown function (DUF2517) E3399_RS15490 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) E3399_RS15495 PF03814 Potassium-transporting ATPase A subunit E3399_RS15505 PF02669 K+-transporting ATPase, c chain E3399_RS15510 PF13493 Domain of unknown function (DUF4118) E3399_RS15510 PF02702 Osmosensitive K+ channel His kinase sensor domain E3399_RS15510 PF13492 GAF domain E3399_RS15510 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS15515 PF00486 Transcriptional regulatory protein, C terminal E3399_RS15515 PF00072 Response regulator receiver domain E3399_RS15520 PF10940 Protein of unknown function (DUF2618) E3399_RS15525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3399_RS15525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3399_RS15525 PF01276 Orn/Lys/Arg decarboxylase, major domain E3399_RS15530 PF13520 Amino acid permease E3399_RS15540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3399_RS15540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3399_RS15540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3399_RS15540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3399_RS15545 PF17206 SeqA protein N-terminal domain E3399_RS15545 PF03925 SeqA protein C-terminal domain E3399_RS15550 PF12697 Alpha/beta hydrolase family E3399_RS15555 PF01402 Ribbon-helix-helix protein, copG family E3399_RS15560 PF00258 Flavodoxin E3399_RS15565 PF01475 Ferric uptake regulator family E3399_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS15570 PF03466 LysR substrate binding domain E3399_RS15575 PF14537 Cytochrome c3 E3399_RS15575 PF00890 FAD binding domain E3399_RS15585 PF07690 Major Facilitator Superfamily E3399_RS15590 PF13982 YbfN-like lipoprotein E3399_RS15595 PF03573 outer membrane porin, OprD family E3399_RS15600 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E3399_RS15600 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3399_RS15605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3399_RS15605 PF02378 Phosphotransferase system, EIIC E3399_RS15605 PF00367 phosphotransferase system, EIIB E3399_RS15610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E3399_RS15615 PF01979 Amidohydrolase family E3399_RS15620 PF00480 ROK family E3399_RS15620 PF01047 MarR family E3399_RS15625 PF13344 Haloacid dehalogenase-like hydrolase E3399_RS15630 PF13537 Glutamine amidotransferase domain E3399_RS15630 PF00733 Asparagine synthase E3399_RS15670 PF01494 FAD binding domain E3399_RS15675 PF04055 Radical SAM superfamily E3399_RS15675 PF00919 Uncharacterized protein family UPF0004 E3399_RS15675 PF01938 TRAM domain E3399_RS15680 PF02562 PhoH-like protein E3399_RS15685 PF02130 Uncharacterized protein family UPF0054 E3399_RS15690 PF00571 CBS domain E3399_RS15690 PF03471 Transporter associated domain E3399_RS15695 PF00795 Carbon-nitrogen hydrolase E3399_RS15700 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS15705 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS15710 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS15715 PF00005 ABC transporter E3399_RS15720 PF01156 Inosine-uridine preferring nucleoside hydrolase E3399_RS15730 PF00012 Hsp70 protein E3399_RS15740 PF06889 Protein of unknown function (DUF1266) E3399_RS15750 PF06889 Protein of unknown function (DUF1266) E3399_RS15760 PF07295 Zinc-ribbon containing domain E3399_RS15765 PF02954 Bacterial regulatory protein, Fis family E3399_RS15765 PF00989 PAS fold E3399_RS15765 PF00158 Sigma-54 interaction domain E3399_RS15770 PF03812 2-keto-3-deoxygluconate permease E3399_RS15775 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E3399_RS15785 PF13603 Leucyl-tRNA synthetase, Domain 2 E3399_RS15785 PF00133 tRNA synthetases class I (I, L, M and V) E3399_RS15785 PF08264 Anticodon-binding domain of tRNA E3399_RS15790 PF04390 Lipopolysaccharide-assembly E3399_RS15795 PF14840 Processivity clamp loader gamma complex DNA pol III C-term E3399_RS15795 PF06144 DNA polymerase III, delta subunit E3399_RS15800 PF01467 Cytidylyltransferase-like E3399_RS15805 PF00155 Aminotransferase class I and II E3399_RS15810 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS15820 PF02590 Predicted SPOUT methyltransferase E3399_RS15825 PF03717 Penicillin-binding Protein dimerisation domain E3399_RS15825 PF00905 Penicillin binding protein transpeptidase domain E3399_RS15830 PF01098 Cell cycle protein E3399_RS15835 PF05036 Sporulation related domain E3399_RS15835 PF03330 Lytic transglycolase E3399_RS15840 PF00768 D-alanyl-D-alanine carboxypeptidase E3399_RS15840 PF07943 Penicillin-binding protein 5, C-terminal domain E3399_RS15845 PF04359 Protein of unknown function (DUF493) E3399_RS15850 PF03099 Biotin/lipoate A/B protein ligase family E3399_RS15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS15855 PF03466 LysR substrate binding domain E3399_RS15860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E3399_RS15860 PF04055 Radical SAM superfamily E3399_RS15865 PF02416 mttA/Hcf106 family E3399_RS15870 PF00795 Carbon-nitrogen hydrolase E3399_RS15875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E3399_RS15880 PF00313 'Cold-shock' DNA-binding domain E3399_RS15885 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP E3399_RS15890 PF03606 C4-dicarboxylate anaerobic carrier E3399_RS15895 PF12431 Transcriptional regulator E3399_RS15895 PF00072 Response regulator receiver domain E3399_RS15900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3399_RS15900 PF00989 PAS fold E3399_RS15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS15900 PF17203 Single cache domain 3 E3399_RS15905 PF08218 Citrate lyase ligase C-terminal domain E3399_RS15910 PF06857 Malonate decarboxylase delta subunit (MdcD) E3399_RS15915 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS15920 PF04223 Citrate lyase, alpha subunit (CitF) E3399_RS15925 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E3399_RS15930 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E3399_RS15935 PF00939 Sodium:sulfate symporter transmembrane region E3399_RS15940 PF00445 Ribonuclease T2 family E3399_RS15945 PF14760 Rnk N-terminus E3399_RS15945 PF01272 Transcription elongation factor, GreA/GreB, C-term E3399_RS15950 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS15950 PF13823 Alcohol dehydrogenase GroES-associated E3399_RS15950 PF00107 Zinc-binding dehydrogenase E3399_RS15955 PF00582 Universal stress protein family E3399_RS15965 PF13247 4Fe-4S dicluster domain E3399_RS15970 PF00384 Molybdopterin oxidoreductase E3399_RS15970 PF01568 Molydopterin dinucleotide binding domain E3399_RS15970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS15980 PF13192 Thioredoxin domain E3399_RS15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS15985 PF10417 C-terminal domain of 1-Cys peroxiredoxin E3399_RS15985 PF00578 AhpC/TSA family E3399_RS15990 PF13098 Thioredoxin-like domain E3399_RS16000 PF01507 Phosphoadenosine phosphosulfate reductase family E3399_RS16000 PF11922 Domain of unknown function (DUF3440) E3399_RS16005 PF02195 ParB-like nuclease domain E3399_RS16010 PF00155 Aminotransferase class I and II E3399_RS16015 PF00465 Iron-containing alcohol dehydrogenase E3399_RS16020 PF04328 Selenoprotein, putative E3399_RS16025 PF02554 Carbon starvation protein CstA E3399_RS16025 PF13722 5TM C-terminal transporter carbon starvation CstA E3399_RS16030 PF03061 Thioesterase superfamily E3399_RS16040 PF00550 Phosphopantetheine attachment site E3399_RS16040 PF00857 Isochorismatase family E3399_RS16045 PF00501 AMP-binding enzyme E3399_RS16045 PF13193 AMP-binding enzyme C-terminal domain E3399_RS16050 PF00425 chorismate binding enzyme E3399_RS16055 PF01497 Periplasmic binding protein E3399_RS16060 PF05977 Transmembrane secretion effector E3399_RS16065 PF01032 FecCD transport family E3399_RS16070 PF01032 FecCD transport family E3399_RS16075 PF00005 ABC transporter E3399_RS16080 PF02706 Chain length determinant protein E3399_RS16085 PF13193 AMP-binding enzyme C-terminal domain E3399_RS16085 PF00668 Condensation domain E3399_RS16085 PF00501 AMP-binding enzyme E3399_RS16085 PF00550 Phosphopantetheine attachment site E3399_RS16085 PF00975 Thioesterase domain E3399_RS16090 PF03621 MbtH-like protein E3399_RS16095 PF11806 Domain of unknown function (DUF3327) E3399_RS16095 PF00756 Putative esterase E3399_RS16100 PF07715 TonB-dependent Receptor Plug Domain E3399_RS16100 PF00593 TonB dependent receptor E3399_RS16105 PF01648 4'-phosphopantetheinyl transferase superfamily E3399_RS16105 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E3399_RS16110 PF04107 Glutamate-cysteine ligase family 2(GCS2) E3399_RS16115 PF06643 Protein of unknown function (DUF1158) E3399_RS16120 PF12833 Helix-turn-helix domain E3399_RS16125 PF00440 Bacterial regulatory proteins, tetR family E3399_RS16125 PF16295 Tetracyclin repressor-like, C-terminal domain E3399_RS16130 PF04237 YjbR E3399_RS16135 PF00881 Nitroreductase family E3399_RS16145 PF03830 PTS system sorbose subfamily IIB component E3399_RS16155 PF03613 PTS system mannose/fructose/sorbose family IID component E3399_RS16165 PF01380 SIS domain E3399_RS16170 PF00874 PRD domain E3399_RS16170 PF03610 PTS system fructose IIA component E3399_RS16170 PF00158 Sigma-54 interaction domain E3399_RS16175 PF03797 Autotransporter beta-domain E3399_RS16175 PF00657 GDSL-like Lipase/Acylhydrolase E3399_RS16180 PF00924 Mechanosensitive ion channel E3399_RS16185 PF00324 Amino acid permease E3399_RS16195 PF04224 Protein of unknown function, DUF417 E3399_RS16200 PF07338 Protein of unknown function (DUF1471) E3399_RS16205 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS16205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3399_RS16210 PF12833 Helix-turn-helix domain E3399_RS16210 PF12852 Cupin E3399_RS16215 PF00873 AcrB/AcrD/AcrF family E3399_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS16220 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS16220 PF00672 HAMP domain E3399_RS16230 PF04138 GtrA-like protein E3399_RS16235 PF00535 Glycosyl transferase family 2 E3399_RS16260 PF00535 Glycosyl transferase family 2 E3399_RS16265 PF04138 GtrA-like protein E3399_RS16280 PF00589 Phage integrase family E3399_RS16295 PF00196 Bacterial regulatory proteins, luxR family E3399_RS16310 PF00072 Response regulator receiver domain E3399_RS16310 PF00196 Bacterial regulatory proteins, luxR family E3399_RS16315 PF00419 Fimbrial protein E3399_RS16320 PF00419 Fimbrial protein E3399_RS16325 PF13953 PapC C-terminal domain E3399_RS16325 PF13954 PapC N-terminal domain E3399_RS16325 PF00577 Outer membrane usher protein E3399_RS16330 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS16330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS16340 PF00419 Fimbrial protein E3399_RS16350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E3399_RS16350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E3399_RS16360 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3399_RS16375 PF01406 tRNA synthetases class I (C) catalytic domain E3399_RS16375 PF09190 DALR domain E3399_RS16380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E3399_RS16385 PF12850 Calcineurin-like phosphoesterase superfamily domain E3399_RS16390 PF00731 AIR carboxylase E3399_RS16395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E3399_RS16395 PF02222 ATP-grasp domain E3399_RS16400 PF00696 Amino acid kinase family E3399_RS16405 PF11392 Protein of unknown function (DUF2877) E3399_RS16410 PF06545 Protein of unknown function (DUF1116) E3399_RS16415 PF02629 CoA binding domain E3399_RS16415 PF00549 CoA-ligase E3399_RS16420 PF02615 Malate/L-lactate dehydrogenase E3399_RS16425 PF01546 Peptidase family M20/M25/M40 E3399_RS16430 PF07883 Cupin domain E3399_RS16430 PF05899 Protein of unknown function (DUF861) E3399_RS16435 PF02595 Glycerate kinase family E3399_RS16440 PF00860 Permease family E3399_RS16445 PF01979 Amidohydrolase family E3399_RS16450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3399_RS16460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3399_RS16460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3399_RS16465 PF01261 Xylose isomerase-like TIM barrel E3399_RS16470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS16470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS16470 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS16475 PF09339 IclR helix-turn-helix domain E3399_RS16475 PF01614 Bacterial transcriptional regulator E3399_RS16480 PF04115 Ureidoglycolate lyase E3399_RS16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS16485 PF03466 LysR substrate binding domain E3399_RS16495 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS16500 PF00005 ABC transporter E3399_RS16500 PF09383 NIL domain E3399_RS16505 PF03180 NLPA lipoprotein E3399_RS16520 PF00005 ABC transporter E3399_RS16525 PF13472 GDSL-like Lipase/Acylhydrolase family E3399_RS16530 PF00106 short chain dehydrogenase E3399_RS16535 PF00085 Thioredoxin E3399_RS16540 PF03649 Uncharacterised protein family (UPF0014) E3399_RS16545 PF00005 ABC transporter E3399_RS16550 PF01145 SPFH domain / Band 7 family E3399_RS16550 PF16200 C-terminal region of band_7 E3399_RS16555 PF01957 NfeD-like C-terminal, partner-binding E3399_RS16560 PF13411 MerR HTH family regulatory protein E3399_RS16565 PF00403 Heavy-metal-associated domain E3399_RS16575 PF01963 TraB family E3399_RS16580 PF04073 Aminoacyl-tRNA editing domain E3399_RS16585 PF00149 Calcineurin-like phosphoesterase E3399_RS16585 PF02872 5'-nucleotidase, C-terminal domain E3399_RS16590 PF07690 Major Facilitator Superfamily E3399_RS16595 PF00999 Sodium/hydrogen exchanger family E3399_RS16595 PF02254 TrkA-N domain E3399_RS16600 PF00294 pfkB family carbohydrate kinase E3399_RS16605 PF07859 alpha/beta hydrolase fold E3399_RS16610 PF00762 Ferrochelatase E3399_RS16615 PF05191 Adenylate kinase, active site lid E3399_RS16620 PF00183 Hsp90 protein E3399_RS16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS16625 PF02132 RecR protein E3399_RS16625 PF13662 Toprim domain E3399_RS16630 PF02575 YbaB/EbfC DNA-binding family E3399_RS16635 PF12170 DNA polymerase III tau subunit V interacting with alpha E3399_RS16635 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E3399_RS16635 PF12169 DNA polymerase III subunits gamma and tau domain III E3399_RS16640 PF00156 Phosphoribosyl transferase domain E3399_RS16645 PF04304 Protein of unknown function (DUF454) E3399_RS16650 PF07445 Primosomal replication protein priC E3399_RS16655 PF10689 Protein of unknown function (DUF2496) E3399_RS16660 PF04754 Putative transposase, YhgA-like E3399_RS16665 PF12794 Mechanosensitive ion channel inner membrane domain 1 E3399_RS16665 PF12795 Mechanosensitive ion channel porin domain E3399_RS16665 PF00924 Mechanosensitive ion channel E3399_RS16670 PF08361 MAATS-type transcriptional repressor, C-terminal region E3399_RS16670 PF00440 Bacterial regulatory proteins, tetR family E3399_RS16675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS16675 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS16680 PF00873 AcrB/AcrD/AcrF family E3399_RS16685 PF10757 Biofilm formation regulator YbaJ E3399_RS16690 PF05321 Haemolysin expression modulating protein E3399_RS16695 PF12464 Maltose acetyltransferase E3399_RS16695 PF14602 Hexapeptide repeat of succinyl-transferase E3399_RS16700 PF10777 Inner membrane protein YlaC E3399_RS16705 PF00444 Ribosomal protein L36 E3399_RS16710 PF01197 Ribosomal protein L31 E3399_RS16715 PF12792 CSS motif domain associated with EAL E3399_RS16715 PF00563 EAL domain E3399_RS16725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3399_RS16730 PF09619 Type III secretion system lipoprotein chaperone (YscW) E3399_RS16740 PF00909 Ammonium Transporter Family E3399_RS16745 PF00543 Nitrogen regulatory protein P-II E3399_RS16750 PF00005 ABC transporter E3399_RS16750 PF00664 ABC transporter transmembrane region E3399_RS16755 PF00005 ABC transporter E3399_RS16755 PF00664 ABC transporter transmembrane region E3399_RS16760 PF13404 AsnC-type helix-turn-helix domain E3399_RS16760 PF01037 Lrp/AsnC ligand binding domain E3399_RS16775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS16775 PF12793 Sugar transport-related sRNA regulator N-term E3399_RS16780 PF06508 Queuosine biosynthesis protein QueC E3399_RS16795 PF13145 PPIC-type PPIASE domain E3399_RS16800 PF00216 Bacterial DNA-binding protein E3399_RS16805 PF02190 ATP-dependent protease La (LON) substrate-binding domain E3399_RS16805 PF05362 Lon protease (S16) C-terminal proteolytic domain E3399_RS16805 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS16810 PF10431 C-terminal, D2-small domain, of ClpB protein E3399_RS16810 PF07724 AAA domain (Cdc48 subfamily) E3399_RS16810 PF06689 ClpX C4-type zinc finger E3399_RS16815 PF00574 Clp protease E3399_RS16820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3399_RS16820 PF05697 Bacterial trigger factor protein (TF) E3399_RS16820 PF05698 Bacterial trigger factor protein (TF) C-terminus E3399_RS16830 PF01722 BolA-like protein E3399_RS16835 PF08139 Prokaryotic membrane lipoprotein lipid attachment site E3399_RS16835 PF03923 Uncharacterized lipoprotein E3399_RS16840 PF07690 Major Facilitator Superfamily E3399_RS16845 PF06481 COX Aromatic Rich Motif E3399_RS16845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E3399_RS16850 PF00115 Cytochrome C and Quinol oxidase polypeptide I E3399_RS16855 PF00510 Cytochrome c oxidase subunit III E3399_RS16860 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E3399_RS16865 PF01040 UbiA prenyltransferase family E3399_RS16880 PF07690 Major Facilitator Superfamily E3399_RS16885 PF04461 Protein of unknown function (DUF520) E3399_RS16890 PF02558 Ketopantoate reductase PanE/ApbA E3399_RS16890 PF08546 Ketopantoate reductase PanE/ApbA C terminal E3399_RS16895 PF01965 DJ-1/PfpI family E3399_RS16905 PF00266 Aminotransferase class-V E3399_RS16910 PF00392 Bacterial regulatory proteins, gntR family E3399_RS16910 PF07702 UTRA domain E3399_RS16915 PF01547 Bacterial extracellular solute-binding protein E3399_RS16920 PF00005 ABC transporter E3399_RS16920 PF08402 TOBE domain E3399_RS16925 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS16930 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS16935 PF02926 THUMP domain E3399_RS16935 PF02568 Thiamine biosynthesis protein (ThiI) E3399_RS16940 PF02609 Exonuclease VII small subunit E3399_RS16945 PF00348 Polyprenyl synthetase E3399_RS16950 PF02780 Transketolase, C-terminal domain E3399_RS16950 PF02779 Transketolase, pyrimidine binding domain E3399_RS16950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E3399_RS16955 PF00248 Aldo/keto reductase family E3399_RS16960 PF04608 Phosphatidylglycerophosphatase A E3399_RS16965 PF00586 AIR synthase related protein, N-terminal domain E3399_RS16965 PF02769 AIR synthase related protein, C-terminal domain E3399_RS16970 PF01029 NusB family E3399_RS16975 PF00885 6,7-dimethyl-8-ribityllumazine synthase E3399_RS16980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3399_RS16980 PF01872 RibD C-terminal domain E3399_RS16985 PF03477 ATP cone domain E3399_RS16990 PF11622 Protein of unknown function (DUF3251) E3399_RS16995 PF03502 Nucleoside-specific channel-forming protein, Tsx E3399_RS17010 PF01844 HNH endonuclease E3399_RS17025 PF02355 Protein export membrane protein E3399_RS17025 PF07549 SecD/SecF GG Motif E3399_RS17030 PF07549 SecD/SecF GG Motif E3399_RS17030 PF13721 SecD export protein N-terminal TM region E3399_RS17030 PF02355 Protein export membrane protein E3399_RS17035 PF02699 Preprotein translocase subunit E3399_RS17040 PF01702 Queuine tRNA-ribosyltransferase E3399_RS17045 PF02547 Queuosine biosynthesis protein E3399_RS17050 PF04336 Acyl carrier protein phosphodiesterase E3399_RS17055 PF00578 AhpC/TSA family E3399_RS17055 PF10417 C-terminal domain of 1-Cys peroxiredoxin E3399_RS17060 PF00128 Alpha amylase, catalytic domain E3399_RS17060 PF02903 Alpha amylase, N-terminal ig-like domain E3399_RS17065 PF00324 Amino acid permease E3399_RS17070 PF05525 Branched-chain amino acid transport protein E3399_RS17075 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS17075 PF11808 Phosphate regulon sensor protein PhoR E3399_RS17075 PF00989 PAS fold E3399_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS17080 PF00486 Transcriptional regulatory protein, C terminal E3399_RS17080 PF00072 Response regulator receiver domain E3399_RS17085 PF00149 Calcineurin-like phosphoesterase E3399_RS17085 PF12320 Type 5 capsule protein repressor C-terminal domain E3399_RS17090 PF13476 AAA domain E3399_RS17095 PF07690 Major Facilitator Superfamily E3399_RS17100 PF00480 ROK family E3399_RS17105 PF04381 Putative exonuclease, RdgC E3399_RS17110 PF06865 Pyrimidine/purine nucleoside phosphorylase E3399_RS17115 PF07302 AroM protein E3399_RS17120 PF16362 YaiA protein E3399_RS17125 PF01202 Shikimate kinase E3399_RS17130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E3399_RS17135 PF03807 NADP oxidoreductase coenzyme F420-dependent E3399_RS17135 PF14748 Pyrroline-5-carboxylate reductase dimerisation E3399_RS17140 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS17140 PF05230 MASE2 domain E3399_RS17145 PF07769 psiF repeat E3399_RS17150 PF10796 Sigma-S stabilisation anti-adaptor protein E3399_RS17155 PF07690 Major Facilitator Superfamily E3399_RS17165 PF07478 D-ala D-ala ligase C-terminus E3399_RS17165 PF01820 D-ala D-ala ligase N-terminus E3399_RS17170 PF10953 Protein of unknown function (DUF2754) E3399_RS17175 PF10954 Protein of unknown function (DUF2755) E3399_RS17180 PF07759 Protein of unknown function (DUF1615) E3399_RS17185 PF05992 SbmA/BacA-like family E3399_RS17195 PF00144 Beta-lactamase E3399_RS17200 PF15977 Winged helix-turn-helix DNA binding E3399_RS17205 PF03797 Autotransporter beta-domain E3399_RS17210 PF00490 Delta-aminolevulinic acid dehydratase E3399_RS17215 PF16177 Acetyl-coenzyme A synthetase N-terminus E3399_RS17215 PF13193 AMP-binding enzyme C-terminal domain E3399_RS17215 PF00501 AMP-binding enzyme E3399_RS17220 PF03972 MmgE/PrpD family E3399_RS17225 PF00285 Citrate synthase, C-terminal domain E3399_RS17235 PF02954 Bacterial regulatory protein, Fis family E3399_RS17235 PF06506 Propionate catabolism activator E3399_RS17235 PF00158 Sigma-54 interaction domain E3399_RS17240 PF07338 Protein of unknown function (DUF1471) E3399_RS17245 PF01810 LysE type translocator E3399_RS17250 PF00593 TonB dependent receptor E3399_RS17250 PF07715 TonB-dependent Receptor Plug Domain E3399_RS17265 PF02322 Cytochrome bd terminal oxidase subunit II E3399_RS17270 PF01654 Cytochrome bd terminal oxidase subunit I E3399_RS17280 PF04851 Type III restriction enzyme, res subunit E3399_RS17280 PF08774 VRR-NUC domain E3399_RS17285 PF18273 Type III R-M EcoP15I C-terminal domain E3399_RS17285 PF01555 DNA methylase E3399_RS17290 PF07690 Major Facilitator Superfamily E3399_RS17300 PF00376 MerR family regulatory protein E3399_RS17300 PF09278 MerR, DNA binding E3399_RS17305 PF00403 Heavy-metal-associated domain E3399_RS17310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3399_RS17310 PF00529 HlyD membrane-fusion protein of T1SS E3399_RS17315 PF00873 AcrB/AcrD/AcrF family E3399_RS17320 PF02321 Outer membrane efflux protein E3399_RS17340 PF13505 Outer membrane protein beta-barrel domain E3399_RS17355 PF00563 EAL domain E3399_RS17355 PF12792 CSS motif domain associated with EAL E3399_RS17370 PF16970 Type-1 fimbrial protein, A E3399_RS17375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS17375 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS17380 PF13954 PapC N-terminal domain E3399_RS17380 PF00577 Outer membrane usher protein E3399_RS17380 PF13953 PapC C-terminal domain E3399_RS17390 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS17390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS17405 PF03466 LysR substrate binding domain E3399_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS17410 PF00561 alpha/beta hydrolase fold E3399_RS17415 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3399_RS17420 PF00694 Aconitase C-terminal domain E3399_RS17425 PF00330 Aconitase family (aconitate hydratase) E3399_RS17430 PF07690 Major Facilitator Superfamily E3399_RS17435 PF08986 Domain of unknown function (DUF1889) E3399_RS17440 PF08841 Diol dehydratase reactivase ATPase-like domain E3399_RS17440 PF18427 DD-reactivating factor swiveling domain E3399_RS17445 PF18427 DD-reactivating factor swiveling domain E3399_RS17445 PF08841 Diol dehydratase reactivase ATPase-like domain E3399_RS17455 PF00589 Phage integrase family E3399_RS17455 PF13356 Arm DNA-binding domain E3399_RS17465 PF00171 Aldehyde dehydrogenase family E3399_RS17470 PF01472 PUA domain E3399_RS17470 PF00696 Amino acid kinase family E3399_RS17475 PF00267 Gram-negative porin E3399_RS17480 PF07417 Sigma factor-binding transcriptional regulator Crl E3399_RS17485 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) E3399_RS17490 PF00156 Phosphoribosyl transferase domain E3399_RS17495 PF01546 Peptidase family M20/M25/M40 E3399_RS17495 PF07687 Peptidase dimerisation domain E3399_RS17500 PF00472 RF-1 domain E3399_RS17510 PF00817 impB/mucB/samB family E3399_RS17510 PF11799 impB/mucB/samB family C-terminal domain E3399_RS17510 PF11798 IMS family HHH motif E3399_RS17515 PF03734 L,D-transpeptidase catalytic domain E3399_RS17520 PF13230 Glutamine amidotransferases class-II E3399_RS17525 PF13580 SIS domain E3399_RS17530 PF02770 Acyl-CoA dehydrogenase, middle domain E3399_RS17530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3399_RS17530 PF09317 Domain of unknown function (DUF1974) E3399_RS17530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3399_RS17535 PF00795 Carbon-nitrogen hydrolase E3399_RS17545 PF13505 Outer membrane protein beta-barrel domain E3399_RS17565 PF01037 Lrp/AsnC ligand binding domain E3399_RS17565 PF13404 AsnC-type helix-turn-helix domain E3399_RS17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS17610 PF03466 LysR substrate binding domain E3399_RS17630 PF00577 Outer membrane usher protein E3399_RS17630 PF13954 PapC N-terminal domain E3399_RS17630 PF13953 PapC C-terminal domain E3399_RS17635 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS17635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS17665 PF13148 Protein of unknown function (DUF3987) E3399_RS17695 PF01926 50S ribosome-binding GTPase E3399_RS17705 PF08220 DeoR-like helix-turn-helix domain E3399_RS17705 PF13280 WYL domain E3399_RS17735 PF06006 Bacterial protein of unknown function (DUF905) E3399_RS17740 PF06067 Domain of unknown function (DUF932) E3399_RS17755 PF03230 Antirestriction protein E3399_RS17760 PF04002 RadC-like JAB domain E3399_RS17770 PF06174 Protein of unknown function (DUF987) E3399_RS17780 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E3399_RS17790 PF06755 CbtA_toxin of type IV toxin-antitoxin system E3399_RS17815 PF00929 Exonuclease E3399_RS17820 PF00075 RNase H E3399_RS17825 PF08241 Methyltransferase domain E3399_RS17830 PF16123 Hydroxyacylglutathione hydrolase C-terminus E3399_RS17830 PF00753 Metallo-beta-lactamase superfamily E3399_RS17835 PF01476 LysM domain E3399_RS17835 PF01464 Transglycosylase SLT domain E3399_RS17840 PF08241 Methyltransferase domain E3399_RS17845 PF03372 Endonuclease/Exonuclease/phosphatase family E3399_RS17850 PF07690 Major Facilitator Superfamily E3399_RS17855 PF03466 LysR substrate binding domain E3399_RS17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS17860 PF00248 Aldo/keto reductase family E3399_RS17900 PF00005 ABC transporter E3399_RS17900 PF09383 NIL domain E3399_RS17905 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS17910 PF03180 NLPA lipoprotein E3399_RS17915 PF16358 RcsF lipoprotein E3399_RS17920 PF18389 TrmO C-terminal domain E3399_RS17920 PF01980 tRNA-methyltransferase O E3399_RS17925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3399_RS17925 PF04073 Aminoacyl-tRNA editing domain E3399_RS17925 PF03129 Anticodon binding domain E3399_RS17930 PF17185 NlpE C-terminal OB domain E3399_RS17930 PF04170 NlpE N-terminal domain E3399_RS17935 PF00472 RF-1 domain E3399_RS17940 PF07152 YaeQ protein E3399_RS17945 PF06786 Uncharacterised protein family (UPF0253) E3399_RS17950 PF07073 Modulator of Rho-dependent transcription termination (ROF) E3399_RS17955 PF01171 PP-loop family E3399_RS17955 PF09179 TilS substrate binding domain E3399_RS17955 PF11734 TilS substrate C-terminal domain E3399_RS17960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3399_RS17965 PF01276 Orn/Lys/Arg decarboxylase, major domain E3399_RS17965 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3399_RS17965 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3399_RS17970 PF18416 N-acetylglucosamine binding protein domain 2 E3399_RS17970 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E3399_RS17975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E3399_RS17980 PF02811 PHP domain E3399_RS17980 PF07733 Bacterial DNA polymerase III alpha NTPase domain E3399_RS17980 PF01336 OB-fold nucleic acid binding domain E3399_RS17980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E3399_RS17980 PF14579 Helix-hairpin-helix motif E3399_RS17985 PF01351 Ribonuclease HII E3399_RS17990 PF02684 Lipid-A-disaccharide synthetase E3399_RS17995 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E3399_RS17995 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS18000 PF07977 FabA-like domain E3399_RS18005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E3399_RS18005 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS18010 PF03938 Outer membrane protein (OmpH-like) E3399_RS18015 PF01103 Surface antigen E3399_RS18015 PF07244 Surface antigen variable number repeat E3399_RS18020 PF17820 PDZ domain E3399_RS18020 PF02163 Peptidase family M50 E3399_RS18030 PF01255 Putative undecaprenyl diphosphate synthase E3399_RS18035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E3399_RS18035 PF13288 DXP reductoisomerase C-terminal domain E3399_RS18035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E3399_RS18040 PF01765 Ribosome recycling factor E3399_RS18045 PF00696 Amino acid kinase family E3399_RS18050 PF00889 Elongation factor TS E3399_RS18055 PF00318 Ribosomal protein S2 E3399_RS18060 PF00557 Metallopeptidase family M24 E3399_RS18065 PF01966 HD domain E3399_RS18065 PF01842 ACT domain E3399_RS18065 PF01909 Nucleotidyltransferase domain E3399_RS18065 PF08335 GlnD PII-uridylyltransferase E3399_RS18070 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS18070 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E3399_RS18070 PF14602 Hexapeptide repeat of succinyl-transferase E3399_RS18075 PF07690 Major Facilitator Superfamily E3399_RS18075 PF00083 Sugar (and other) transporter E3399_RS18080 PF11944 Protein of unknown function (DUF3461) E3399_RS18085 PF17853 GGDEF-like domain E3399_RS18085 PF13556 PucR C-terminal helix-turn-helix domain E3399_RS18085 PF05651 Putative sugar diacid recognition E3399_RS18090 PF00595 PDZ domain E3399_RS18095 PF01966 HD domain E3399_RS18095 PF13286 Phosphohydrolase-associated domain E3399_RS18100 PF01048 Phosphorylase superfamily E3399_RS18105 PF01497 Periplasmic binding protein E3399_RS18110 PF03458 UPF0126 domain E3399_RS18115 PF01521 Iron-sulphur cluster biosynthesis E3399_RS18120 PF00654 Voltage gated chloride channel E3399_RS18125 PF00202 Aminotransferase class-III E3399_RS18130 PF11245 Protein of unknown function (DUF2544) E3399_RS18135 PF00419 Fimbrial protein E3399_RS18140 PF00419 Fimbrial protein E3399_RS18145 PF00419 Fimbrial protein E3399_RS18150 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS18150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS18155 PF00577 Outer membrane usher protein E3399_RS18155 PF13953 PapC C-terminal domain E3399_RS18155 PF13954 PapC N-terminal domain E3399_RS18170 PF01032 FecCD transport family E3399_RS18175 PF01497 Periplasmic binding protein E3399_RS18180 PF00005 ABC transporter E3399_RS18185 PF07715 TonB-dependent Receptor Plug Domain E3399_RS18185 PF00593 TonB dependent receptor E3399_RS18190 PF14814 Bifunctional transglycosylase second domain E3399_RS18190 PF00905 Penicillin binding protein transpeptidase domain E3399_RS18190 PF00912 Transglycosylase E3399_RS18190 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal E3399_RS18195 PF00270 DEAD/DEAH box helicase E3399_RS18195 PF08482 ATP-dependent helicase C-terminal E3399_RS18195 PF00271 Helicase conserved C-terminal domain E3399_RS18195 PF04408 Helicase associated domain (HA2) E3399_RS18200 PF02834 LigT like Phosphoesterase E3399_RS18205 PF03749 Sugar fermentation stimulation protein RE domain E3399_RS18205 PF17746 SfsA N-terminal OB domain E3399_RS18210 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3399_RS18215 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3399_RS18220 PF12626 Polymerase A arginine-rich C-terminus E3399_RS18220 PF12627 Probable RNA and SrmB- binding site of polymerase A E3399_RS18220 PF01743 Poly A polymerase head domain E3399_RS18225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E3399_RS18230 PF02548 Ketopantoate hydroxymethyltransferase E3399_RS18235 PF02569 Pantoate-beta-alanine ligase E3399_RS18240 PF02261 Aspartate decarboxylase E3399_RS18250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS18250 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS18255 PF13953 PapC C-terminal domain E3399_RS18255 PF13954 PapC N-terminal domain E3399_RS18255 PF00577 Outer membrane usher protein E3399_RS18260 PF00419 Fimbrial protein E3399_RS18280 PF01522 Polysaccharide deacetylase E3399_RS18285 PF03610 PTS system fructose IIA component E3399_RS18295 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS18295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS18300 PF13953 PapC C-terminal domain E3399_RS18300 PF13954 PapC N-terminal domain E3399_RS18300 PF00577 Outer membrane usher protein E3399_RS18305 PF00419 Fimbrial protein E3399_RS18310 PF01061 ABC-2 type transporter E3399_RS18315 PF00005 ABC transporter E3399_RS18320 PF00484 Carbonic anhydrase E3399_RS18325 PF00156 Phosphoribosyl transferase domain E3399_RS18330 PF01011 PQQ enzyme repeat E3399_RS18335 PF00394 Multicopper oxidase E3399_RS18335 PF07731 Multicopper oxidase E3399_RS18335 PF07732 Multicopper oxidase E3399_RS18340 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) E3399_RS18345 PF17284 Spermidine synthase tetramerisation domain E3399_RS18350 PF02675 S-adenosylmethionine decarboxylase E3399_RS18355 PF00455 DeoR C terminal sensor domain E3399_RS18355 PF08220 DeoR-like helix-turn-helix domain E3399_RS18360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E3399_RS18365 PF17042 Nucleotide-binding C-terminal domain E3399_RS18365 PF07005 Sugar-binding N-terminal domain E3399_RS18370 PF03812 2-keto-3-deoxygluconate permease E3399_RS18375 PF06062 Uncharacterised protein family (UPF0231) E3399_RS18390 PF00330 Aconitase family (aconitate hydratase) E3399_RS18390 PF06434 Aconitate hydratase 2 N-terminus E3399_RS18390 PF11791 Aconitate B N-terminal domain E3399_RS18420 PF06434 Aconitate hydratase 2 N-terminus E3399_RS18420 PF11791 Aconitate B N-terminal domain E3399_RS18420 PF00330 Aconitase family (aconitate hydratase) E3399_RS18425 PF11737 Protein of unknown function (DUF3300) E3399_RS18440 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS18440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3399_RS18445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3399_RS18445 PF00364 Biotin-requiring enzyme E3399_RS18445 PF02817 e3 binding domain E3399_RS18450 PF17831 Pyruvate dehydrogenase E1 component middle domain E3399_RS18450 PF00456 Transketolase, thiamine diphosphate binding domain E3399_RS18455 PF07729 FCD domain E3399_RS18455 PF00392 Bacterial regulatory proteins, gntR family E3399_RS18460 PF00324 Amino acid permease E3399_RS18470 PF04616 Glycosyl hydrolases family 43 E3399_RS18470 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain E3399_RS18475 PF17113 Regulatory signalling modulator protein AmpE E3399_RS18480 PF01510 N-acetylmuramoyl-L-alanine amidase E3399_RS18485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E3399_RS18485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E3399_RS18495 PF07963 Prokaryotic N-terminal methylation motif E3399_RS18500 PF00437 Type II/IV secretion system protein E3399_RS18500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E3399_RS18505 PF00482 Type II secretion system (T2SS), protein F E3399_RS18510 PF00478 IMP dehydrogenase / GMP reductase domain E3399_RS18515 PF01121 Dephospho-CoA kinase E3399_RS18520 PF07072 Cell division protein E3399_RS18525 PF03884 DNA gyrase inhibitor YacG E3399_RS18540 PF00293 NUDIX domain E3399_RS18545 PF01043 SecA preprotein cross-linking domain E3399_RS18545 PF07516 SecA Wing and Scaffold domain E3399_RS18545 PF02810 SEC-C motif E3399_RS18545 PF07517 SecA DEAD-like domain E3399_RS18550 PF06558 Secretion monitor precursor protein (SecM) E3399_RS18555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E3399_RS18560 PF12327 FtsZ family, C-terminal domain E3399_RS18560 PF00091 Tubulin/FtsZ family, GTPase domain E3399_RS18565 PF02491 SHS2 domain inserted in FTSA E3399_RS18570 PF03799 Cell division protein FtsQ E3399_RS18570 PF08478 POTRA domain, FtsQ-type E3399_RS18575 PF07478 D-ala D-ala ligase C-terminus E3399_RS18575 PF01820 D-ala D-ala ligase N-terminus E3399_RS18580 PF08245 Mur ligase middle domain E3399_RS18580 PF02875 Mur ligase family, glutamate ligase domain E3399_RS18580 PF01225 Mur ligase family, catalytic domain E3399_RS18585 PF03033 Glycosyltransferase family 28 N-terminal domain E3399_RS18585 PF04101 Glycosyltransferase family 28 C-terminal domain E3399_RS18590 PF01098 Cell cycle protein E3399_RS18595 PF02875 Mur ligase family, glutamate ligase domain E3399_RS18595 PF08245 Mur ligase middle domain E3399_RS18600 PF00953 Glycosyl transferase family 4 E3399_RS18600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E3399_RS18605 PF08245 Mur ligase middle domain E3399_RS18605 PF01225 Mur ligase family, catalytic domain E3399_RS18605 PF02875 Mur ligase family, glutamate ligase domain E3399_RS18610 PF01225 Mur ligase family, catalytic domain E3399_RS18610 PF02875 Mur ligase family, glutamate ligase domain E3399_RS18610 PF08245 Mur ligase middle domain E3399_RS18615 PF03717 Penicillin-binding Protein dimerisation domain E3399_RS18615 PF00905 Penicillin binding protein transpeptidase domain E3399_RS18620 PF04999 Cell division protein FtsL E3399_RS18625 PF01795 MraW methylase family E3399_RS18630 PF02381 MraZ protein, putative antitoxin-like E3399_RS18635 PF00356 Bacterial regulatory proteins, lacI family E3399_RS18635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3399_RS18640 PF10369 Small subunit of acetolactate synthase E3399_RS18645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS18645 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS18645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS18650 PF03466 LysR substrate binding domain E3399_RS18655 PF08054 Leucine operon leader peptide E3399_RS18660 PF00682 HMGL-like E3399_RS18660 PF08502 LeuA allosteric (dimerisation) domain E3399_RS18665 PF00180 Isocitrate/isopropylmalate dehydrogenase E3399_RS18670 PF00330 Aconitase family (aconitate hydratase) E3399_RS18675 PF00694 Aconitase C-terminal domain E3399_RS18685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS18685 PF12793 Sugar transport-related sRNA regulator N-term E3399_RS18695 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS18700 PF00005 ABC transporter E3399_RS18705 PF09335 SNARE associated Golgi protein E3399_RS18710 PF02311 AraC-like ligand binding domain E3399_RS18710 PF12833 Helix-turn-helix domain E3399_RS18715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS18720 PF11762 L-arabinose isomerase C-terminal domain E3399_RS18720 PF02610 L-arabinose isomerase E3399_RS18725 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS18745 PF03104 DNA polymerase family B, exonuclease domain E3399_RS18745 PF00136 DNA polymerase family B E3399_RS18750 PF00271 Helicase conserved C-terminal domain E3399_RS18750 PF12137 RNA polymerase recycling family C-terminal E3399_RS18750 PF00176 SNF2 family N-terminal domain E3399_RS18750 PF18339 RapA N-terminal Tudor like domain 1 E3399_RS18750 PF18337 RapA N-terminal Tudor like domain E3399_RS18755 PF00849 RNA pseudouridylate synthase E3399_RS18760 PF05099 Tellurite resistance protein TerB E3399_RS18760 PF00226 DnaJ domain E3399_RS18765 PF04453 LPS transport system D E3399_RS18765 PF03968 OstA-like protein E3399_RS18770 PF09312 SurA N-terminal domain E3399_RS18770 PF00639 PPIC-type PPIASE domain E3399_RS18775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E3399_RS18780 PF00398 Ribosomal RNA adenine dimethylase E3399_RS18785 PF04379 ApaG domain E3399_RS18790 PF00149 Calcineurin-like phosphoesterase E3399_RS18795 PF00186 Dihydrofolate reductase E3399_RS18800 PF02254 TrkA-N domain E3399_RS18800 PF00999 Sodium/hydrogen exchanger family E3399_RS18805 PF02525 Flavodoxin-like fold E3399_RS18810 PF00884 Sulfatase E3399_RS18830 PF06004 Bacterial protein of unknown function (DUF903) E3399_RS18835 PF00083 Sugar (and other) transporter E3399_RS18845 PF01494 FAD binding domain E3399_RS18850 PF00766 Electron transfer flavoprotein FAD-binding domain E3399_RS18850 PF01012 Electron transfer flavoprotein domain E3399_RS18855 PF01012 Electron transfer flavoprotein domain E3399_RS18865 PF02028 BCCT, betaine/carnitine/choline family transporter E3399_RS18870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3399_RS18870 PF02770 Acyl-CoA dehydrogenase, middle domain E3399_RS18870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3399_RS18875 PF02515 CoA-transferase family III E3399_RS18880 PF00501 AMP-binding enzyme E3399_RS18880 PF13193 AMP-binding enzyme C-terminal domain E3399_RS18885 PF00378 Enoyl-CoA hydratase/isomerase E3399_RS18890 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS18895 PF07180 CaiF/GrlA transcriptional regulator E3399_RS18900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3399_RS18900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E3399_RS18900 PF02142 MGS-like domain E3399_RS18905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E3399_RS18905 PF00117 Glutamine amidotransferase class-I E3399_RS18915 PF01113 Dihydrodipicolinate reductase, N-terminus E3399_RS18915 PF05173 Dihydrodipicolinate reductase, C-terminus E3399_RS18920 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase E3399_RS18925 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E3399_RS18930 PF04223 Citrate lyase, alpha subunit (CitF) E3399_RS18935 PF03328 HpcH/HpaI aldolase/citrate lyase family E3399_RS18940 PF06857 Malonate decarboxylase delta subunit (MdcD) E3399_RS18945 PF00583 Acetyltransferase (GNAT) family E3399_RS18945 PF08218 Citrate lyase ligase C-terminal domain E3399_RS18950 PF03390 2-hydroxycarboxylate transporter family E3399_RS18955 PF04277 Oxaloacetate decarboxylase, gamma chain E3399_RS18960 PF00682 HMGL-like E3399_RS18960 PF02436 Conserved carboxylase domain E3399_RS18960 PF00364 Biotin-requiring enzyme E3399_RS18965 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit E3399_RS18970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS18970 PF17203 Single cache domain 3 E3399_RS18975 PF00072 Response regulator receiver domain E3399_RS18975 PF12431 Transcriptional regulator E3399_RS18980 PF01156 Inosine-uridine preferring nucleoside hydrolase E3399_RS18990 PF02401 LytB protein E3399_RS18995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3399_RS19000 PF01252 Signal peptidase (SPase) II E3399_RS19005 PF08264 Anticodon-binding domain of tRNA E3399_RS19005 PF00133 tRNA synthetases class I (I, L, M and V) E3399_RS19005 PF06827 Zinc finger found in FPG and IleRS E3399_RS19010 PF06574 FAD synthetase E3399_RS19010 PF01687 Riboflavin kinase E3399_RS19015 PF10837 Protein of unknown function (DUF2575) E3399_RS19020 PF01649 Ribosomal protein S20 E3399_RS19030 PF01055 Glycosyl hydrolases family 31 E3399_RS19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS19035 PF03466 LysR substrate binding domain E3399_RS19040 PF06965 Na+/H+ antiporter 1 E3399_RS19055 PF13186 Iron-sulfur cluster-binding domain E3399_RS19055 PF04055 Radical SAM superfamily E3399_RS19060 PF16385 Domain of unknown function E3399_RS19060 PF00884 Sulfatase E3399_RS19070 PF00149 Calcineurin-like phosphoesterase E3399_RS19070 PF02872 5'-nucleotidase, C-terminal domain E3399_RS19085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS19085 PF03466 LysR substrate binding domain E3399_RS19105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS19105 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS19110 PF16970 Type-1 fimbrial protein, A E3399_RS19115 PF00419 Fimbrial protein E3399_RS19120 PF00419 Fimbrial protein E3399_RS19125 PF13954 PapC N-terminal domain E3399_RS19125 PF13953 PapC C-terminal domain E3399_RS19125 PF00577 Outer membrane usher protein E3399_RS19130 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS19130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS19135 PF00419 Fimbrial protein E3399_RS19150 PF00704 Glycosyl hydrolases family 18 E3399_RS19170 PF03466 LysR substrate binding domain E3399_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS19175 PF00226 DnaJ domain E3399_RS19175 PF01556 DnaJ C terminal domain E3399_RS19175 PF00684 DnaJ central domain E3399_RS19180 PF00012 Hsp70 protein E3399_RS19185 PF10807 Protein of unknown function (DUF2541) E3399_RS19190 PF13099 Domain of unknown function (DUF3944) E3399_RS19190 PF03981 Ubiquinol-cytochrome C chaperone E3399_RS19195 PF01184 GPR1/FUN34/yaaH family E3399_RS19200 PF00994 Probable molybdopterin binding domain E3399_RS19205 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3399_RS19210 PF01235 Sodium:alanine symporter family E3399_RS19215 PF03883 Peroxide stress protein YaaA E3399_RS19220 PF14821 Threonine synthase N terminus E3399_RS19220 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS19225 PF00288 GHMP kinases N terminal domain E3399_RS19225 PF08544 GHMP kinases C terminal E3399_RS19230 PF13840 ACT domain E3399_RS19230 PF00696 Amino acid kinase family E3399_RS19230 PF01842 ACT domain E3399_RS19230 PF03447 Homoserine dehydrogenase, NAD binding domain E3399_RS19230 PF00742 Homoserine dehydrogenase E3399_RS19235 PF08254 Threonine leader peptide E3399_RS19240 PF00588 SpoU rRNA Methylase family E3399_RS19250 PF00072 Response regulator receiver domain E3399_RS19250 PF00486 Transcriptional regulatory protein, C terminal E3399_RS19260 PF15977 Winged helix-turn-helix DNA binding E3399_RS19270 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS19270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS19275 PF13953 PapC C-terminal domain E3399_RS19275 PF13954 PapC N-terminal domain E3399_RS19275 PF00577 Outer membrane usher protein E3399_RS19290 PF06123 Inner membrane protein CreD E3399_RS19295 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS19295 PF00672 HAMP domain E3399_RS19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS19300 PF00072 Response regulator receiver domain E3399_RS19300 PF00486 Transcriptional regulatory protein, C terminal E3399_RS19305 PF05981 CreA protein E3399_RS19310 PF12833 Helix-turn-helix domain E3399_RS19310 PF06445 GyrI-like small molecule binding domain E3399_RS19315 PF00300 Histidine phosphatase superfamily (branch 1) E3399_RS19320 PF01931 Protein of unknown function DUF84 E3399_RS19325 PF01371 Trp repressor protein E3399_RS19330 PF01464 Transglycosylase SLT domain E3399_RS19330 PF14718 Soluble lytic murein transglycosylase L domain E3399_RS19335 PF00005 ABC transporter E3399_RS19335 PF12848 ABC transporter E3399_RS19340 PF01381 Helix-turn-helix E3399_RS19340 PF13521 AAA domain E3399_RS19345 PF18073 Rubredoxin metal binding domain E3399_RS19350 PF18429 Domain of unknown function (DUF5609) E3399_RS19355 PF10144 Bacterial virulence factor haemolysin E3399_RS19360 PF03099 Biotin/lipoate A/B protein ligase family E3399_RS19360 PF10437 Bacterial lipoate protein ligase C-terminus E3399_RS19370 PF06551 Protein of unknown function (DUF1120) E3399_RS19375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS19380 PF13953 PapC C-terminal domain E3399_RS19380 PF13954 PapC N-terminal domain E3399_RS19380 PF00577 Outer membrane usher protein E3399_RS19390 PF01048 Phosphorylase superfamily E3399_RS19395 PF01676 Metalloenzyme superfamily E3399_RS19400 PF02885 Glycosyl transferase family, helical bundle domain E3399_RS19400 PF00591 Glycosyl transferase family, a/b domain E3399_RS19400 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E3399_RS19405 PF01791 DeoC/LacD family aldolase E3399_RS19410 PF11230 Protein of unknown function (DUF3029) E3399_RS19415 PF04055 Radical SAM superfamily E3399_RS19420 PF01026 TatD related DNase E3399_RS19425 PF01734 Patatin-like phospholipase E3399_RS19430 PF07043 Protein of unknown function (DUF1328) E3399_RS19435 PF04972 BON domain E3399_RS19440 PF03144 Elongation factor Tu domain 2 E3399_RS19440 PF00009 Elongation factor Tu GTP binding domain E3399_RS19440 PF16658 Class II release factor RF3, C-terminal domain E3399_RS19445 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS19450 PF00583 Acetyltransferase (GNAT) family E3399_RS19455 PF03603 DNA polymerase III psi subunit E3399_RS19460 PF08468 Methyltransferase small domain N-terminal E3399_RS19460 PF05175 Methyltransferase small domain E3399_RS19480 PF07256 Protein of unknown function (DUF1435) E3399_RS19485 PF05230 MASE2 domain E3399_RS19485 PF00990 Diguanylate cyclase, GGDEF domain E3399_RS19490 PF06276 Ferric iron reductase FhuF-like transporter E3399_RS19490 PF11575 FhuF 2Fe-2S C-terminal domain E3399_RS19495 PF04073 Aminoacyl-tRNA editing domain E3399_RS19500 PF00196 Bacterial regulatory proteins, luxR family E3399_RS19505 PF00196 Bacterial regulatory proteins, luxR family E3399_RS19510 PF06738 Putative threonine/serine exporter E3399_RS19515 PF12821 Threonine/Serine exporter, ThrE E3399_RS19520 PF17948 DnaT DNA-binding domain E3399_RS19525 PF01695 IstB-like ATP binding protein E3399_RS19530 PF10696 Protein of unknown function (DUF2501) E3399_RS19535 PF00884 Sulfatase E3399_RS19540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3399_RS19540 PF00672 HAMP domain E3399_RS19540 PF02203 Tar ligand binding domain homologue E3399_RS19545 PF02554 Carbon starvation protein CstA E3399_RS19545 PF13722 5TM C-terminal transporter carbon starvation CstA E3399_RS19550 PF04328 Selenoprotein, putative E3399_RS19555 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3399_RS19555 PF07683 Cobalamin synthesis protein cobW C-terminal domain E3399_RS19590 PF12161 HsdM N-terminal domain E3399_RS19590 PF02384 N-6 DNA Methylase E3399_RS19600 PF02384 N-6 DNA Methylase E3399_RS19605 PF01420 Type I restriction modification DNA specificity domain E3399_RS19610 PF11867 Domain of unknown function (DUF3387) E3399_RS19610 PF18766 SWI2/SNF2 ATPase E3399_RS19610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E3399_RS19630 PF00171 Aldehyde dehydrogenase family E3399_RS19635 PF04754 Putative transposase, YhgA-like E3399_RS19640 PF07690 Major Facilitator Superfamily E3399_RS19645 PF04286 Protein of unknown function (DUF445) E3399_RS19650 PF06779 Uncharacterised MFS-type transporter YbfB E3399_RS19655 PF07670 Nucleoside recognition E3399_RS19660 PF07670 Nucleoside recognition E3399_RS19665 PF01979 Amidohydrolase family E3399_RS19670 PF03466 LysR substrate binding domain E3399_RS19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS19675 PF01177 Asp/Glu/Hydantoin racemase E3399_RS19685 PF00579 tRNA synthetases class I (W and Y) E3399_RS19690 PF07729 FCD domain E3399_RS19690 PF00392 Bacterial regulatory proteins, gntR family E3399_RS19695 PF01738 Dienelactone hydrolase family E3399_RS19700 PF03625 Domain of unknown function DUF302 E3399_RS19700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E3399_RS19720 PF09857 Putative toxin of bacterial toxin-antitoxin pair E3399_RS19725 PF13847 Methyltransferase domain E3399_RS19730 PF01709 Transcriptional regulator E3399_RS19760 PF17345 Family of unknown function (DUF5375) E3399_RS19790 PF04606 Ogr/Delta-like zinc finger E3399_RS19805 PF09225 Restriction endonuclease PvuII E3399_RS19810 PF01381 Helix-turn-helix E3399_RS19815 PF01555 DNA methylase E3399_RS19820 PF13356 Arm DNA-binding domain E3399_RS19820 PF00589 Phage integrase family E3399_RS19830 PF00107 Zinc-binding dehydrogenase E3399_RS19830 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS19835 PF01202 Shikimate kinase E3399_RS19840 PF00107 Zinc-binding dehydrogenase E3399_RS19840 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS19845 PF00106 short chain dehydrogenase E3399_RS19850 PF02447 GntP family permease E3399_RS19855 PF00356 Bacterial regulatory proteins, lacI family E3399_RS19860 PF03739 Lipopolysaccharide export system permease LptF/LptG E3399_RS19865 PF03739 Lipopolysaccharide export system permease LptF/LptG E3399_RS19870 PF02789 Cytosol aminopeptidase family, N-terminal domain E3399_RS19870 PF00883 Cytosol aminopeptidase family, catalytic domain E3399_RS19875 PF04364 DNA polymerase III chi subunit, HolC E3399_RS19880 PF10458 Valyl tRNA synthetase tRNA binding arm E3399_RS19880 PF08264 Anticodon-binding domain of tRNA E3399_RS19880 PF00133 tRNA synthetases class I (I, L, M and V) E3399_RS19885 PF05987 Bacterial protein of unknown function (DUF898) E3399_RS19890 PF00583 Acetyltransferase (GNAT) family E3399_RS19900 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E3399_RS19905 PF06877 Regulator of ribonuclease activity B E3399_RS19910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3399_RS19910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3399_RS19915 PF04074 YhcH/YjgK/YiaL E3399_RS19925 PF00696 Amino acid kinase family E3399_RS19930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3399_RS19930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3399_RS19935 PF03606 C4-dicarboxylate anaerobic carrier E3399_RS19940 PF01316 Arginine repressor, DNA binding domain E3399_RS19940 PF02863 Arginine repressor, C-terminal domain E3399_RS19950 PF08052 PyrBI operon leader peptide E3399_RS19955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3399_RS19955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3399_RS19960 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E3399_RS19960 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E3399_RS19965 PF01042 Endoribonuclease L-PSP E3399_RS19970 PF00690 Cation transporter/ATPase, N-terminus E3399_RS19970 PF00689 Cation transporting ATPase, C-terminus E3399_RS19975 PF17059 MgtA leader peptide E3399_RS19980 PF00356 Bacterial regulatory proteins, lacI family E3399_RS19985 PF00367 phosphotransferase system, EIIB E3399_RS19985 PF02378 Phosphotransferase system, EIIC E3399_RS19990 PF00128 Alpha amylase, catalytic domain E3399_RS19990 PF11941 Domain of unknown function (DUF3459) E3399_RS19995 PF03477 ATP cone domain E3399_RS19995 PF13597 Anaerobic ribonucleoside-triphosphate reductase E3399_RS20005 PF05016 ParE toxin of type II toxin-antitoxin system, parDE E3399_RS20010 PF04221 RelB antitoxin E3399_RS20015 PF05043 Mga helix-turn-helix domain E3399_RS20015 PF00874 PRD domain E3399_RS20015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS20015 PF08279 HTH domain E3399_RS20020 PF07071 KDGP aldolase E3399_RS20025 PF03841 L-seryl-tRNA selenium transferase E3399_RS20030 PF01979 Amidohydrolase family E3399_RS20060 PF07361 Cytochrome b562 E3399_RS20065 PF01523 Putative modulator of DNA gyrase E3399_RS20070 PF04751 Protein of unknown function (DUF615) E3399_RS20075 PF01261 Xylose isomerase-like TIM barrel E3399_RS20085 PF07690 Major Facilitator Superfamily E3399_RS20090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3399_RS20090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS20095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS20095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS20095 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS20100 PF00294 pfkB family carbohydrate kinase E3399_RS20105 PF07690 Major Facilitator Superfamily E3399_RS20110 PF01261 Xylose isomerase-like TIM barrel E3399_RS20115 PF17189 Glycosyl hydrolase family 30 beta sandwich domain E3399_RS20120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3399_RS20120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3399_RS20125 PF01261 Xylose isomerase-like TIM barrel E3399_RS20140 PF00171 Aldehyde dehydrogenase family E3399_RS20145 PF04962 KduI/IolB family E3399_RS20150 PF00083 Sugar (and other) transporter E3399_RS20155 PF00083 Sugar (and other) transporter E3399_RS20160 PF02685 Glucokinase E3399_RS20160 PF01418 Helix-turn-helix domain, rpiR family E3399_RS20160 PF01380 SIS domain E3399_RS20165 PF01225 Mur ligase family, catalytic domain E3399_RS20165 PF02875 Mur ligase family, glutamate ligase domain E3399_RS20165 PF08245 Mur ligase middle domain E3399_RS20170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E3399_RS20175 PF00719 Inorganic pyrophosphatase E3399_RS20180 PF01979 Amidohydrolase family E3399_RS20185 PF07690 Major Facilitator Superfamily E3399_RS20190 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like E3399_RS20195 PF04357 TamB, inner membrane protein subunit of TAM complex E3399_RS20200 PF07244 Surface antigen variable number repeat E3399_RS20200 PF01103 Surface antigen E3399_RS20200 PF17243 POTRA domain TamA domain 1 E3399_RS20205 PF01625 Peptide methionine sulfoxide reductase E3399_RS20210 PF03471 Transporter associated domain E3399_RS20210 PF01595 Cyclin M transmembrane N-terminal domain E3399_RS20210 PF00571 CBS domain E3399_RS20215 PF06526 Protein of unknown function (DUF1107) E3399_RS20220 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E3399_RS20225 PF00459 Inositol monophosphatase family E3399_RS20230 PF00149 Calcineurin-like phosphoesterase E3399_RS20230 PF02872 5'-nucleotidase, C-terminal domain E3399_RS20235 PF01638 HxlR-like helix-turn-helix E3399_RS20240 PF05368 NmrA-like family E3399_RS20245 PF00892 EamA-like transporter family E3399_RS20250 PF04405 Domain of Unknown function (DUF542) E3399_RS20250 PF01814 Hemerythrin HHE cation binding domain E3399_RS20255 PF00324 Amino acid permease E3399_RS20260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3399_RS20260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E3399_RS20265 PF04225 Opacity-associated protein A LysM-like domain E3399_RS20265 PF08525 Opacity-associated protein A N-terminal motif E3399_RS20275 PF03948 Ribosomal protein L9, C-terminal domain E3399_RS20275 PF01281 Ribosomal protein L9, N-terminal domain E3399_RS20280 PF01084 Ribosomal protein S18 E3399_RS20285 PF00436 Single-strand binding protein family E3399_RS20290 PF01250 Ribosomal protein S6 E3399_RS20305 PF07338 Protein of unknown function (DUF1471) E3399_RS20310 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS20315 PF01261 Xylose isomerase-like TIM barrel E3399_RS20320 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3399_RS20325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS20330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS20335 PF03611 PTS system sugar-specific permease component E3399_RS20345 PF00455 DeoR C terminal sensor domain E3399_RS20345 PF08220 DeoR-like helix-turn-helix domain E3399_RS20350 PF00326 Prolyl oligopeptidase family E3399_RS20355 PF07338 Protein of unknown function (DUF1471) E3399_RS20360 PF07338 Protein of unknown function (DUF1471) E3399_RS20365 PF18158 Adaptive response protein AidB N-terminal domain E3399_RS20365 PF02770 Acyl-CoA dehydrogenase, middle domain E3399_RS20365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3399_RS20370 PF03738 Glutathionylspermidine synthase preATP-grasp E3399_RS20375 PF06693 Protein of unknown function (DUF1190) E3399_RS20380 PF03994 Domain of Unknown Function (DUF350) E3399_RS20385 PF10679 Protein of unknown function (DUF2491) E3399_RS20395 PF04012 PspA/IM30 family E3399_RS20400 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) E3399_RS20405 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3399_RS20405 PF00588 SpoU rRNA Methylase family E3399_RS20410 PF17876 Cold shock domain E3399_RS20410 PF08461 Ribonuclease R winged-helix domain E3399_RS20410 PF00575 S1 RNA binding domain E3399_RS20410 PF00773 RNB domain E3399_RS20410 PF08206 Ribonuclease B OB domain E3399_RS20415 PF02082 Transcriptional regulator E3399_RS20420 PF00709 Adenylosuccinate synthetase E3399_RS20425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E3399_RS20430 PF01145 SPFH domain / Band 7 family E3399_RS20435 PF01145 SPFH domain / Band 7 family E3399_RS20435 PF12221 Bacterial membrane protein N terminal E3399_RS20440 PF16360 GTP-binding GTPase Middle Region E3399_RS20440 PF13167 GTP-binding GTPase N-terminal E3399_RS20440 PF01926 50S ribosome-binding GTPase E3399_RS20445 PF17209 Hfq protein E3399_RS20455 PF08676 MutL C terminal dimerisation domain E3399_RS20455 PF01119 DNA mismatch repair protein, C-terminal domain E3399_RS20460 PF01520 N-acetylmuramoyl-L-alanine amidase E3399_RS20465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E3399_RS20470 PF03853 YjeF-related protein N-terminus E3399_RS20470 PF01256 Carbohydrate kinase E3399_RS20475 PF08331 Domain of unknown function (DUF1730) E3399_RS20495 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3399_RS20500 PF00929 Exonuclease E3399_RS20505 PF03193 RsgA GTPase E3399_RS20510 PF02666 Phosphatidylserine decarboxylase E3399_RS20515 PF12794 Mechanosensitive ion channel inner membrane domain 1 E3399_RS20515 PF12795 Mechanosensitive ion channel porin domain E3399_RS20515 PF00924 Mechanosensitive ion channel E3399_RS20520 PF10840 Protein of unknown function (DUF2645) E3399_RS20525 PF13520 Amino acid permease E3399_RS20530 PF00152 tRNA synthetases class II (D, K and N) E3399_RS20535 PF02910 Fumarate reductase flavoprotein C-term E3399_RS20535 PF00890 FAD binding domain E3399_RS20540 PF13183 4Fe-4S dicluster domain E3399_RS20540 PF13085 2Fe-2S iron-sulfur cluster binding domain E3399_RS20545 PF02300 Fumarate reductase subunit C E3399_RS20550 PF02313 Fumarate reductase subunit D E3399_RS20555 PF08212 Lipocalin-like domain E3399_RS20560 PF00893 Small Multidrug Resistance protein E3399_RS20565 PF00196 Bacterial regulatory proteins, luxR family E3399_RS20570 PF08085 Entericidin EcnA/B family E3399_RS20575 PF08085 Entericidin EcnA/B family E3399_RS20580 PF09285 Elongation factor P, C-terminal E3399_RS20580 PF08207 Elongation factor P (EF-P) KOW-like domain E3399_RS20580 PF01132 Elongation factor P (EF-P) OB domain E3399_RS20585 PF04055 Radical SAM superfamily E3399_RS20590 PF15922 YjeJ-like E3399_RS20595 PF13698 Domain of unknown function (DUF4156) E3399_RS20600 PF00118 TCP-1/cpn60 chaperonin family E3399_RS20605 PF00166 Chaperonin 10 Kd subunit E3399_RS20610 PF13520 Amino acid permease E3399_RS20615 PF04186 FxsA cytoplasmic membrane protein E3399_RS20620 PF10415 Fumarase C C-terminus E3399_RS20620 PF00206 Lyase E3399_RS20625 PF03605 Anaerobic c4-dicarboxylate membrane transporter E3399_RS20630 PF03091 CutA1 divalent ion tolerance protein E3399_RS20635 PF11412 Disulphide bond corrector protein DsbC E3399_RS20635 PF02683 Cytochrome C biogenesis protein transmembrane region E3399_RS20655 PF01569 PAP2 superfamily E3399_RS20660 PF06977 SdiA-regulated E3399_RS20685 PF02432 Fimbrial, major and minor subunit E3399_RS20700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS20705 PF13954 PapC N-terminal domain E3399_RS20705 PF00577 Outer membrane usher protein E3399_RS20715 PF03333 Adhesin biosynthesis transcription regulatory protein E3399_RS20745 PF12833 Helix-turn-helix domain E3399_RS20750 PF00196 Bacterial regulatory proteins, luxR family E3399_RS20750 PF00072 Response regulator receiver domain E3399_RS20765 PF06977 SdiA-regulated E3399_RS20775 PF02613 Nitrate reductase delta subunit E3399_RS20780 PF04976 DMSO reductase anchor subunit (DmsC) E3399_RS20785 PF12800 4Fe-4S binding domain E3399_RS20785 PF13247 4Fe-4S dicluster domain E3399_RS20790 PF00384 Molybdopterin oxidoreductase E3399_RS20790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3399_RS20790 PF01568 Molydopterin dinucleotide binding domain E3399_RS20795 PF17203 Single cache domain 3 E3399_RS20795 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3399_RS20795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS20795 PF00989 PAS fold E3399_RS20800 PF00072 Response regulator receiver domain E3399_RS20810 PF03605 Anaerobic c4-dicarboxylate membrane transporter E3399_RS20815 PF05681 Fumarate hydratase (Fumerase) E3399_RS20815 PF05683 Fumarase C-terminus E3399_RS20825 PF02056 Family 4 glycosyl hydrolase E3399_RS20825 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3399_RS20830 PF12833 Helix-turn-helix domain E3399_RS20835 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E3399_RS20835 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3399_RS20835 PF01276 Orn/Lys/Arg decarboxylase, major domain E3399_RS20840 PF12833 Helix-turn-helix domain E3399_RS20845 PF13520 Amino acid permease E3399_RS20850 PF08019 Phosphoethanolamine transferase EptA/EptB E3399_RS20850 PF00884 Sulfatase E3399_RS20855 PF00072 Response regulator receiver domain E3399_RS20855 PF00486 Transcriptional regulatory protein, C terminal E3399_RS20860 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS20860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS20870 PF00083 Sugar (and other) transporter E3399_RS20870 PF08946 Osmosensory transporter coiled coil E3399_RS20875 PF03831 PhnA domain E3399_RS20875 PF08274 PhnA Zinc-Ribbon E3399_RS20880 PF06983 3-demethylubiquinone-9 3-methyltransferase E3399_RS20885 PF00583 Acetyltransferase (GNAT) family E3399_RS20900 PF08238 Sel1 repeat E3399_RS20905 PF00375 Sodium:dicarboxylate symporter family E3399_RS20915 PF03918 Cytochrome C biogenesis protein E3399_RS20920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E3399_RS20920 PF01578 Cytochrome C assembly protein E3399_RS20925 PF03916 Polysulphide reductase, NrfD E3399_RS20930 PF00037 4Fe-4S binding domain E3399_RS20930 PF13247 4Fe-4S dicluster domain E3399_RS20935 PF13435 Cytochrome c554 and c-prime E3399_RS20935 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E3399_RS20940 PF02335 Cytochrome c552 E3399_RS20945 PF16177 Acetyl-coenzyme A synthetase N-terminus E3399_RS20945 PF00501 AMP-binding enzyme E3399_RS20945 PF13193 AMP-binding enzyme C-terminal domain E3399_RS20950 PF04341 Protein of unknown function, DUF485 E3399_RS20955 PF00474 Sodium:solute symporter family E3399_RS20960 PF04172 LrgB-like family E3399_RS20965 PF03788 LrgA family E3399_RS20970 PF03466 LysR substrate binding domain E3399_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS20975 PF00999 Sodium/hydrogen exchanger family E3399_RS20980 PF00860 Permease family E3399_RS20990 PF00376 MerR family regulatory protein E3399_RS20990 PF09278 MerR, DNA binding E3399_RS20995 PF12833 Helix-turn-helix domain E3399_RS21000 PF12792 CSS motif domain associated with EAL E3399_RS21000 PF00563 EAL domain E3399_RS21005 PF15940 Family of unknown function E3399_RS21010 PF00005 ABC transporter E3399_RS21010 PF00664 ABC transporter transmembrane region E3399_RS21040 PF00436 Single-strand binding protein family E3399_RS21045 PF17760 UvrA interaction domain E3399_RS21045 PF00005 ABC transporter E3399_RS21045 PF17755 UvrA DNA-binding domain E3399_RS21060 PF04237 YjbR E3399_RS21065 PF01894 Uncharacterised protein family UPF0047 E3399_RS21070 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) E3399_RS21075 PF00155 Aminotransferase class I and II E3399_RS21080 PF00842 Alanine racemase, C-terminal domain E3399_RS21080 PF01168 Alanine racemase, N-terminal domain E3399_RS21085 PF00772 DnaB-like helicase N terminal domain E3399_RS21085 PF03796 DnaB-like helicase C terminal domain E3399_RS21090 PF08240 Alcohol dehydrogenase GroES-like domain E3399_RS21090 PF00107 Zinc-binding dehydrogenase E3399_RS21095 PF09583 Phage shock protein G (Phageshock_PspG) E3399_RS21100 PF01207 Dihydrouridine synthase (Dus) E3399_RS21110 PF01475 Ferric uptake regulator family E3399_RS21115 PF05532 CsbD-like E3399_RS21125 PF01554 MatE E3399_RS21130 PF01726 LexA DNA binding domain E3399_RS21130 PF00717 Peptidase S24-like E3399_RS21135 PF01219 Prokaryotic diacylglycerol kinase E3399_RS21140 PF01553 Acyltransferase E3399_RS21145 PF01040 UbiA prenyltransferase family E3399_RS21150 PF04345 Chorismate lyase E3399_RS21155 PF07148 Maltose operon periplasmic protein precursor (MalM) E3399_RS21160 PF02264 LamB porin E3399_RS21165 PF00005 ABC transporter E3399_RS21165 PF17912 MalK OB fold domain E3399_RS21175 PF01547 Bacterial extracellular solute-binding protein E3399_RS21180 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS21180 PF14785 Maltose transport system permease protein MalF P2 domain E3399_RS21185 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS21190 PF06146 Phosphate-starvation-inducible E E3399_RS21195 PF06082 Exopolysaccharide biosynthesis protein YbjH E3399_RS21200 PF06251 Capsule biosynthesis GfcC E3399_RS21205 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF E3399_RS21215 PF00342 Phosphoglucose isomerase E3399_RS21220 PF01842 ACT domain E3399_RS21220 PF00696 Amino acid kinase family E3399_RS21225 PF08765 Mor transcription activator family E3399_RS21255 PF00455 DeoR C terminal sensor domain E3399_RS21255 PF08220 DeoR-like helix-turn-helix domain E3399_RS21260 PF11656 YjbD family (DUF3811) E3399_RS21265 PF01479 S4 domain E3399_RS21265 PF00849 RNA pseudouridylate synthase E3399_RS21270 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) E3399_RS21280 PF03575 Peptidase family S51 E3399_RS21285 PF02690 Na+/Pi-cotransporter E3399_RS21290 PF02607 B12 binding domain E3399_RS21290 PF02310 B12 binding domain E3399_RS21290 PF02965 Vitamin B12 dependent methionine synthase, activation domain E3399_RS21290 PF00809 Pterin binding enzyme E3399_RS21290 PF02574 Homocysteine S-methyltransferase E3399_RS21295 PF01614 Bacterial transcriptional regulator E3399_RS21295 PF09339 IclR helix-turn-helix domain E3399_RS21305 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E3399_RS21310 PF00463 Isocitrate lyase family E3399_RS21315 PF01274 Malate synthase E3399_RS21320 PF04204 Homoserine O-succinyltransferase E3399_RS21325 PF13673 Acetyltransferase (GNAT) domain E3399_RS21350 PF02142 MGS-like domain E3399_RS21350 PF01808 AICARFT/IMPCHase bienzyme E3399_RS21355 PF02843 Phosphoribosylglycinamide synthetase, C domain E3399_RS21355 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E3399_RS21355 PF02844 Phosphoribosylglycinamide synthetase, N domain E3399_RS21360 PF00158 Sigma-54 interaction domain E3399_RS21360 PF00072 Response regulator receiver domain E3399_RS21360 PF02954 Bacterial regulatory protein, Fis family E3399_RS21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS21365 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS21370 PF13801 Heavy-metal resistance E3399_RS21375 PF07356 Protein of unknown function (DUF1481) E3399_RS21380 PF00216 Bacterial DNA-binding protein E3399_RS21385 PF04222 Protein of unknown function (DUF416) E3399_RS21390 PF04493 Endonuclease V E3399_RS21395 PF01208 Uroporphyrinogen decarboxylase (URO-D) E3399_RS21400 PF00293 NUDIX domain E3399_RS21400 PF09297 NADH pyrophosphatase zinc ribbon domain E3399_RS21405 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E3399_RS21410 PF01964 Radical SAM ThiC family E3399_RS21410 PF13667 ThiC-associated domain E3399_RS21415 PF02581 Thiamine monophosphate synthase E3399_RS21420 PF00899 ThiF family E3399_RS21425 PF02597 ThiS family E3399_RS21430 PF05690 Thiazole biosynthesis protein ThiG E3399_RS21435 PF06968 Biotin and Thiamin Synthesis associated domain E3399_RS21435 PF04055 Radical SAM superfamily E3399_RS21460 PF04997 RNA polymerase Rpb1, domain 1 E3399_RS21460 PF00623 RNA polymerase Rpb1, domain 2 E3399_RS21460 PF04998 RNA polymerase Rpb1, domain 5 E3399_RS21460 PF05000 RNA polymerase Rpb1, domain 4 E3399_RS21460 PF04983 RNA polymerase Rpb1, domain 3 E3399_RS21465 PF04563 RNA polymerase beta subunit E3399_RS21465 PF04561 RNA polymerase Rpb2, domain 2 E3399_RS21465 PF04565 RNA polymerase Rpb2, domain 3 E3399_RS21465 PF10385 RNA polymerase beta subunit external 1 domain E3399_RS21465 PF00562 RNA polymerase Rpb2, domain 6 E3399_RS21465 PF04560 RNA polymerase Rpb2, domain 7 E3399_RS21470 PF00542 Ribosomal protein L7/L12 C-terminal domain E3399_RS21470 PF16320 Ribosomal protein L7/L12 dimerisation domain E3399_RS21475 PF00466 Ribosomal protein L10 E3399_RS21480 PF00687 Ribosomal protein L1p/L10e family E3399_RS21485 PF00298 Ribosomal protein L11, RNA binding domain E3399_RS21485 PF03946 Ribosomal protein L11, N-terminal domain E3399_RS21490 PF00467 KOW motif E3399_RS21490 PF02357 Transcription termination factor nusG E3399_RS21495 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E3399_RS21500 PF00009 Elongation factor Tu GTP binding domain E3399_RS21500 PF03143 Elongation factor Tu C-terminal domain E3399_RS21500 PF03144 Elongation factor Tu domain 2 E3399_RS21530 PF00485 Phosphoribulokinase / Uridine kinase family E3399_RS21535 PF02237 Biotin protein ligase C terminal domain E3399_RS21535 PF03099 Biotin/lipoate A/B protein ligase family E3399_RS21535 PF08279 HTH domain E3399_RS21540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E3399_RS21540 PF01565 FAD binding domain E3399_RS21575 PF00593 TonB dependent receptor E3399_RS21575 PF07715 TonB-dependent Receptor Plug Domain E3399_RS21580 PF05958 tRNA (Uracil-5-)-methyltransferase E3399_RS21585 PF07226 Protein of unknown function (DUF1422) E3399_RS21590 PF00440 Bacterial regulatory proteins, tetR family E3399_RS21595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3399_RS21595 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3399_RS21600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS21600 PF03466 LysR substrate binding domain E3399_RS21610 PF14698 Argininosuccinate lyase C-terminal E3399_RS21610 PF00206 Lyase E3399_RS21615 PF00696 Amino acid kinase family E3399_RS21620 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3399_RS21620 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3399_RS21625 PF01546 Peptidase family M20/M25/M40 E3399_RS21625 PF07687 Peptidase dimerisation domain E3399_RS21630 PF00311 Phosphoenolpyruvate carboxylase E3399_RS21635 PF00884 Sulfatase E3399_RS21640 PF12833 Helix-turn-helix domain E3399_RS21645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS21650 PF04055 Radical SAM superfamily E3399_RS21655 PF01228 Glycine radical E3399_RS21655 PF02901 Pyruvate formate lyase-like E3399_RS21660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS21670 PF00381 PTS HPr component phosphorylation site E3399_RS21670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3399_RS21670 PF02896 PEP-utilising enzyme, TIM barrel domain E3399_RS21670 PF00391 PEP-utilising enzyme, mobile domain E3399_RS21670 PF05524 PEP-utilising enzyme, N-terminal E3399_RS21675 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3399_RS21680 PF00465 Iron-containing alcohol dehydrogenase E3399_RS21685 PF06940 Domain of unknown function (DUF1287) E3399_RS21690 PF00141 Peroxidase E3399_RS21695 PF02219 Methylenetetrahydrofolate reductase E3399_RS21700 PF00149 Calcineurin-like phosphoesterase E3399_RS21700 PF02872 5'-nucleotidase, C-terminal domain E3399_RS21700 PF17936 Bacterial Ig domain E3399_RS21715 PF00924 Mechanosensitive ion channel E3399_RS21715 PF05552 Conserved TM helix E3399_RS21720 PF00696 Amino acid kinase family E3399_RS21720 PF00742 Homoserine dehydrogenase E3399_RS21720 PF03447 Homoserine dehydrogenase, NAD binding domain E3399_RS21725 PF01053 Cys/Met metabolism PLP-dependent enzyme E3399_RS21730 PF01340 Met Apo-repressor, MetJ E3399_RS21735 PF05935 Arylsulfotransferase (ASST) E3399_RS21735 PF17425 Arylsulfotransferase Ig-like domain E3399_RS21745 PF01197 Ribosomal protein L31 E3399_RS21750 PF00271 Helicase conserved C-terminal domain E3399_RS21750 PF18074 Primosomal protein N C-terminal domain E3399_RS21750 PF17764 3′ DNA-binding domain (3′BD) E3399_RS21750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E3399_RS21750 PF00270 DEAD/DEAH box helicase E3399_RS21755 PF00356 Bacterial regulatory proteins, lacI family E3399_RS21760 PF05036 Sporulation related domain E3399_RS21765 PF00227 Proteasome subunit E3399_RS21770 PF00004 ATPase family associated with various cellular activities (AAA) E3399_RS21770 PF07724 AAA domain (Cdc48 subfamily) E3399_RS21770 PF10431 C-terminal, D2-small domain, of ClpB protein E3399_RS21775 PF01040 UbiA prenyltransferase family E3399_RS21780 PF03737 Aldolase/RraA E3399_RS21785 PF06005 Cell division protein ZapB E3399_RS21790 PF00230 Major intrinsic protein E3399_RS21795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS21795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS21800 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E3399_RS21805 PF00175 Oxidoreductase NAD-binding domain E3399_RS21805 PF00970 Oxidoreductase FAD-binding domain E3399_RS21810 PF05656 Protein of unknown function (DUF805) E3399_RS21815 PF07305 Protein of unknown function (DUF1454) E3399_RS21820 PF00121 Triosephosphate isomerase E3399_RS21825 PF00834 Ribulose-phosphate 3 epimerase family E3399_RS21830 PF03992 Antibiotic biosynthesis monooxygenase E3399_RS21835 PF01791 DeoC/LacD family aldolase E3399_RS21840 PF13407 Periplasmic binding protein domain E3399_RS21845 PF02653 Branched-chain amino acid transport system / permease component E3399_RS21850 PF02653 Branched-chain amino acid transport system / permease component E3399_RS21855 PF00005 ABC transporter E3399_RS21860 PF04198 Putative sugar-binding domain E3399_RS21865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS21865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS21875 PF02611 CDP-diacylglycerol pyrophosphatase E3399_RS21885 PF00392 Bacterial regulatory proteins, gntR family E3399_RS21885 PF00155 Aminotransferase class I and II E3399_RS21895 PF00294 pfkB family carbohydrate kinase E3399_RS21905 PF02611 CDP-diacylglycerol pyrophosphatase E3399_RS21915 PF00365 Phosphofructokinase E3399_RS21920 PF16916 Dimerisation domain of Zinc Transporter E3399_RS21920 PF01545 Cation efflux family E3399_RS21925 PF07813 LTXXQ motif family protein E3399_RS21930 PF00072 Response regulator receiver domain E3399_RS21930 PF00486 Transcriptional regulatory protein, C terminal E3399_RS21935 PF00672 HAMP domain E3399_RS21935 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS21935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS21935 PF16527 Two-component sensor protein CpxA, periplasmic domain E3399_RS21945 PF03473 MOSC domain E3399_RS21945 PF03475 3-alpha domain E3399_RS21950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3399_RS21950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3399_RS21955 PF03480 Bacterial extracellular solute-binding protein, family 7 E3399_RS21960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E3399_RS21965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E3399_RS21970 PF06178 Oligogalacturonate-specific porin protein (KdgM) E3399_RS21975 PF06379 L-rhamnose-proton symport protein (RhaT) E3399_RS21980 PF02311 AraC-like ligand binding domain E3399_RS21980 PF12833 Helix-turn-helix domain E3399_RS21985 PF12833 Helix-turn-helix domain E3399_RS21985 PF02311 AraC-like ligand binding domain E3399_RS21990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3399_RS21990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3399_RS21995 PF06134 L-rhamnose isomerase (RhaA) E3399_RS22000 PF00596 Class II Aldolase and Adducin N-terminal domain E3399_RS22005 PF00465 Iron-containing alcohol dehydrogenase E3399_RS22010 PF05336 L-rhamnose mutarotase E3399_RS22020 PF03591 AzlC protein E3399_RS22030 PF12889 Protein of unknown function (DUF3829) E3399_RS22035 PF12889 Protein of unknown function (DUF3829) E3399_RS22040 PF02634 FdhD/NarQ family E3399_RS22050 PF09163 Formate dehydrogenase N, transmembrane E3399_RS22050 PF13247 4Fe-4S dicluster domain E3399_RS22055 PF01292 Prokaryotic cytochrome b561 E3399_RS22060 PF04216 Protein involved in formate dehydrogenase formation E3399_RS22070 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system E3399_RS22075 PF07859 alpha/beta hydrolase fold E3399_RS22080 PF00583 Acetyltransferase (GNAT) family E3399_RS22080 PF09500 Putative thioesterase (yiiD_Cterm) E3399_RS22085 PF02580 D-Tyr-tRNA(Tyr) deacylase E3399_RS22090 PF03631 Virulence factor BrkB E3399_RS22095 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS22100 PF08220 DeoR-like helix-turn-helix domain E3399_RS22100 PF00455 DeoR C terminal sensor domain E3399_RS22105 PF00294 pfkB family carbohydrate kinase E3399_RS22110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3399_RS22110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3399_RS22115 PF01791 DeoC/LacD family aldolase E3399_RS22125 PF01263 Aldose 1-epimerase E3399_RS22130 PF01055 Glycosyl hydrolases family 31 E3399_RS22145 PF06178 Oligogalacturonate-specific porin protein (KdgM) E3399_RS22165 PF04055 Radical SAM superfamily E3399_RS22180 PF03144 Elongation factor Tu domain 2 E3399_RS22180 PF00009 Elongation factor Tu GTP binding domain E3399_RS22180 PF00679 Elongation factor G C-terminus E3399_RS22185 PF00120 Glutamine synthetase, catalytic domain E3399_RS22185 PF03951 Glutamine synthetase, beta-Grasp domain E3399_RS22190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3399_RS22190 PF00512 His Kinase A (phospho-acceptor) domain E3399_RS22190 PF00989 PAS fold E3399_RS22195 PF00158 Sigma-54 interaction domain E3399_RS22195 PF00072 Response regulator receiver domain E3399_RS22195 PF02954 Bacterial regulatory protein, Fis family E3399_RS22205 PF06969 HemN C-terminal domain E3399_RS22205 PF04055 Radical SAM superfamily E3399_RS22210 PF04220 Der GTPase activator (YihI) E3399_RS22220 PF01926 50S ribosome-binding GTPase E3399_RS22225 PF00476 DNA polymerase family A E3399_RS22225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3399_RS22225 PF01367 5'-3' exonuclease, C-terminal SAM fold E3399_RS22225 PF01612 3'-5' exonuclease E3399_RS22230 PF01553 Acyltransferase E3399_RS22235 PF01323 DSBA-like thioredoxin domain E3399_RS22240 PF01636 Phosphotransferase enzyme family E3399_RS22245 PF06288 Protein of unknown function (DUF1040) E3399_RS22250 PF12804 MobA-like NTP transferase domain E3399_RS22255 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E3399_RS22285 PF12724 Flavodoxin domain E3399_RS22290 PF02386 Cation transport protein E3399_RS22295 PF01205 Uncharacterized protein family UPF0029 E3399_RS22295 PF09186 Domain of unknown function (DUF1949) E3399_RS22300 PF00557 Metallopeptidase family M24 E3399_RS22305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3399_RS22305 PF00378 Enoyl-CoA hydratase/isomerase E3399_RS22305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3399_RS22310 PF00108 Thiolase, N-terminal domain E3399_RS22310 PF02803 Thiolase, C-terminal domain E3399_RS22315 PF05935 Arylsulfotransferase (ASST) E3399_RS22315 PF17425 Arylsulfotransferase Ig-like domain E3399_RS22320 PF00175 Oxidoreductase NAD-binding domain E3399_RS22320 PF00970 Oxidoreductase FAD-binding domain E3399_RS22325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E3399_RS22330 PF02357 Transcription termination factor nusG E3399_RS22335 PF01026 TatD related DNase E3399_RS22340 PF00902 Sec-independent protein translocase protein (TatC) E3399_RS22350 PF02416 mttA/Hcf106 family E3399_RS22355 PF03109 ABC1 family E3399_RS22360 PF02036 SCP-2 sterol transfer family E3399_RS22365 PF01209 ubiE/COQ5 methyltransferase family E3399_RS22370 PF02646 RmuC family E3399_RS22375 PF01048 Phosphorylase superfamily E3399_RS22380 PF01738 Dienelactone hydrolase family E3399_RS22385 PF04055 Radical SAM superfamily E3399_RS22385 PF13186 Iron-sulfur cluster-binding domain E3399_RS22395 PF08267 Cobalamin-independent synthase, N-terminal domain E3399_RS22395 PF01717 Cobalamin-independent synthase, Catalytic domain E3399_RS22400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS22400 PF03466 LysR substrate binding domain E3399_RS22405 PF00892 EamA-like transporter family E3399_RS22415 PF12146 Serine aminopeptidase, S33 E3399_RS22420 PF01810 LysE type translocator E3399_RS22425 PF01810 LysE type translocator E3399_RS22430 PF00570 HRDC domain E3399_RS22430 PF00271 Helicase conserved C-terminal domain E3399_RS22430 PF00270 DEAD/DEAH box helicase E3399_RS22430 PF09382 RQC domain E3399_RS22430 PF16124 RecQ zinc-binding E3399_RS22435 PF02253 Phospholipase A1 E3399_RS22440 PF03061 Thioesterase superfamily E3399_RS22445 PF00892 EamA-like transporter family E3399_RS22455 PF10947 Protein of unknown function (DUF2628) E3399_RS22460 PF01544 CorA-like Mg2+ transporter protein E3399_RS22465 PF13361 UvrD-like helicase C-terminal domain E3399_RS22465 PF00580 UvrD/REP helicase N-terminal domain E3399_RS22470 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS22475 PF00589 Phage integrase family E3399_RS22475 PF02899 Phage integrase, N-terminal SAM-like domain E3399_RS22480 PF04340 Protein of unknown function, DUF484 E3399_RS22485 PF01678 Diaminopimelate epimerase E3399_RS22490 PF13627 Prokaryotic lipoprotein-attachment site E3399_RS22505 PF01491 Frataxin-like domain E3399_RS22525 PF12633 Adenylate cyclase NT domain E3399_RS22525 PF01295 Adenylate cyclase, class-I E3399_RS22530 PF03900 Porphobilinogen deaminase, C-terminal domain E3399_RS22530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E3399_RS22535 PF02602 Uroporphyrinogen-III synthase HemD E3399_RS22540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E3399_RS22545 PF07219 HemY protein N-terminus E3399_RS22545 PF07719 Tetratricopeptide repeat E3399_RS22570 PF00324 Amino acid permease E3399_RS22575 PF03808 Glycosyl transferase WecB/TagA/CpsF family E3399_RS22580 PF06899 WzyE protein, O-antigen assembly polymerase E3399_RS22585 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 E3399_RS22590 PF01943 Polysaccharide biosynthesis protein E3399_RS22595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3399_RS22605 PF00483 Nucleotidyl transferase E3399_RS22610 PF16363 GDP-mannose 4,6 dehydratase E3399_RS22615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3399_RS22615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E3399_RS22615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3399_RS22620 PF02350 UDP-N-acetylglucosamine 2-epimerase E3399_RS22625 PF02706 Chain length determinant protein E3399_RS22630 PF00953 Glycosyl transferase family 4 E3399_RS22640 PF07498 Rho termination factor, N-terminal domain E3399_RS22640 PF07497 Rho termination factor, RNA-binding domain E3399_RS22640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS22650 PF00085 Thioredoxin E3399_RS22655 PF00270 DEAD/DEAH box helicase E3399_RS22655 PF00271 Helicase conserved C-terminal domain E3399_RS22660 PF02541 Ppx/GppA phosphatase family E3399_RS22665 PF00580 UvrD/REP helicase N-terminal domain E3399_RS22665 PF13361 UvrD-like helicase C-terminal domain E3399_RS22670 PF04973 Nicotinamide mononucleotide transporter E3399_RS22685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E3399_RS22685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E3399_RS22690 PF03466 LysR substrate binding domain E3399_RS22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS22705 PF00291 Pyridoxal-phosphate dependent enzyme E3399_RS22705 PF00585 C-terminal regulatory domain of Threonine dehydratase E3399_RS22710 PF00920 Dehydratase family E3399_RS22715 PF01063 Amino-transferase class IV E3399_RS22725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3399_RS22725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3399_RS22725 PF00205 Thiamine pyrophosphate enzyme, central domain E3399_RS22730 PF08046 IlvGEDA operon leader peptide E3399_RS22735 PF13335 Magnesium chelatase, subunit ChlI C-terminal E3399_RS22735 PF01078 Magnesium chelatase, subunit ChlI E3399_RS22740 PF04219 Protein of unknown function, DUF E3399_RS22745 PF03466 LysR substrate binding domain E3399_RS22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS22780 PF07729 FCD domain E3399_RS22780 PF00392 Bacterial regulatory proteins, gntR family E3399_RS22785 PF07690 Major Facilitator Superfamily E3399_RS22790 PF00356 Bacterial regulatory proteins, lacI family E3399_RS22795 PF00294 pfkB family carbohydrate kinase E3399_RS22800 PF13407 Periplasmic binding protein domain E3399_RS22805 PF02653 Branched-chain amino acid transport system / permease component E3399_RS22810 PF00005 ABC transporter E3399_RS22815 PF05025 RbsD / FucU transport protein family E3399_RS22820 PF02705 K+ potassium transporter E3399_RS22825 PF07728 AAA domain (dynein-related subfamily) E3399_RS22825 PF17868 AAA lid domain E3399_RS22825 PF12592 Protein of unknown function (DUF3763) E3399_RS22830 PF05762 VWA domain containing CoxE-like protein E3399_RS22835 PF03590 Aspartate-ammonia ligase E3399_RS22840 PF01037 Lrp/AsnC ligand binding domain E3399_RS22845 PF00258 Flavodoxin E3399_RS22850 PF13932 GidA associated domain E3399_RS22850 PF01134 Glucose inhibited division protein A E3399_RS22855 PF02527 rRNA small subunit methyltransferase G E3399_RS22860 PF03899 ATP synthase I chain E3399_RS22865 PF00119 ATP synthase A chain E3399_RS22870 PF00137 ATP synthase subunit C E3399_RS22875 PF00430 ATP synthase B/B' CF(0) E3399_RS22880 PF00213 ATP synthase delta (OSCP) subunit E3399_RS22885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS22885 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3399_RS22885 PF00306 ATP synthase alpha/beta chain, C terminal domain E3399_RS22890 PF00231 ATP synthase E3399_RS22895 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3399_RS22895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3399_RS22900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E3399_RS22900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E3399_RS22910 PF00132 Bacterial transferase hexapeptide (six repeats) E3399_RS22910 PF12804 MobA-like NTP transferase domain E3399_RS22915 PF01380 SIS domain E3399_RS22920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3399_RS22920 PF12793 Sugar transport-related sRNA regulator N-term E3399_RS22925 PF08501 Shikimate dehydrogenase substrate binding domain E3399_RS22930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3399_RS22930 PF02378 Phosphotransferase system, EIIC E3399_RS22935 PF12849 PBP superfamily domain E3399_RS22940 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS22945 PF00528 Binding-protein-dependent transport system inner membrane component E3399_RS22950 PF00005 ABC transporter E3399_RS22955 PF01895 PhoU domain E3399_RS22960 PF13419 Haloacid dehalogenase-like hydrolase E3399_RS22965 PF00860 Permease family E3399_RS22970 PF03358 NADPH-dependent FMN reductase E3399_RS22980 PF03466 LysR substrate binding domain E3399_RS22980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3399_RS22985 PF07690 Major Facilitator Superfamily E3399_RS22990 PF01926 50S ribosome-binding GTPase E3399_RS22990 PF12631 MnmE helical domain E3399_RS22990 PF10396 GTP-binding protein TrmE N-terminus E3399_RS22995 PF02096 60Kd inner membrane protein E3399_RS22995 PF14849 YidC periplasmic domain E3399_RS23000 PF01809 Putative membrane protein insertion efficiency factor E3399_RS23005 PF00825 Ribonuclease P E3399_RS23010 PF00468 Ribosomal protein L34 E3399_RS23025 PF06952 PsiA protein E3399_RS23030 PF06290 Plasmid SOS inhibition protein (PsiB) E3399_RS23035 PF02195 ParB-like nuclease domain E3399_RS23040 PF06006 Bacterial protein of unknown function (DUF905) E3399_RS23045 PF00436 Single-strand binding protein family E3399_RS23080 PF07128 Protein of unknown function (DUF1380) E3399_RS23090 PF01555 DNA methylase E3399_RS23095 PF02586 SOS response associated peptidase (SRAP) E3399_RS23105 PF00817 impB/mucB/samB family E3399_RS23105 PF11799 impB/mucB/samB family C-terminal domain E3399_RS23105 PF13438 Domain of unknown function (DUF4113) E3399_RS23110 PF08775 ParB family E3399_RS23110 PF02195 ParB-like nuclease domain E3399_RS23115 PF18607 ParA helix turn helix domain E3399_RS23115 PF13614 AAA domain E3399_RS23125 PF04754 Putative transposase, YhgA-like E3399_RS23130 PF00589 Phage integrase family E3399_RS23135 PF01845 CcdB protein E3399_RS23140 PF07362 Post-segregation antitoxin CcdA E3399_RS23150 PF03472 Autoinducer binding domain E3399_RS23150 PF00196 Bacterial regulatory proteins, luxR family E3399_RS23160 PF01476 LysM domain E3399_RS23160 PF07979 Intimin C-type lectin domain E3399_RS23160 PF11924 Inverse autotransporter, beta-domain E3399_RS23160 PF02368 Bacterial Ig-like domain (group 2) E3399_RS23160 PF02369 Bacterial Ig-like domain (group 1) E3399_RS23170 PF00872 Transposase, Mutator family E3399_RS23175 PF02753 Pili assembly chaperone PapD, C-terminal domain E3399_RS23175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E3399_RS23180 PF00577 Outer membrane usher protein E3399_RS23180 PF13954 PapC N-terminal domain E3399_RS23180 PF13953 PapC C-terminal domain E3399_RS23185 PF13954 PapC N-terminal domain E3399_RS23185 PF00577 Outer membrane usher protein E3399_RS23185 PF13953 PapC C-terminal domain E3399_RS23235 PF12833 Helix-turn-helix domain E3399_RS23265 PF02387 IncFII RepA protein family E3399_RS23275 PF10723 Replication regulatory protein RepB E3399_RS23285 PF05857 TraX protein E3399_RS23295 PF07057 DNA helicase TraI E3399_RS23295 PF08751 TrwC relaxase E3399_RS23295 PF18340 DNA relaxase TraI 2B/2B-like domain E3399_RS23295 PF18272 single-stranded DNA binding TraI N-terminal subdomain E3399_RS23300 PF12615 F sex factor protein N terminal E3399_RS23300 PF10412 Type IV secretion-system coupling protein DNA-binding domain E3399_RS23305 PF05818 Enterobacterial TraT complement resistance protein E3399_RS23315 PF07916 TraG-like protein, N-terminal region E3399_RS23320 PF06122 Conjugative relaxosome accessory transposon protein E3399_RS23325 PF13728 F plasmid transfer operon protein E3399_RS23335 PF06986 Type-1V conjugative transfer system mating pair stabilisation E3399_RS23340 PF09673 Type-F conjugative transfer system pilin assembly protein E3399_RS23350 PF06834 TraU protein E3399_RS23355 PF12477 Sex factor F TraW protein N terminal E3399_RS23360 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) E3399_RS23365 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer E3399_RS23370 PF09676 Type IV conjugative transfer system lipoprotein (TraV) E3399_RS23385 PF03743 Bacterial conjugation TrbI-like protein E3399_RS23395 PF05309 TraE protein E3399_RS23400 PF07178 TraL protein E3399_RS23405 PF05513 TraA E3399_RS23410 PF05509 TraY domain E3399_RS23420 PF05261 TraM protein, DNA-binding E3399_RS23425 PF01464 Transglycosylase SLT domain E3399_RS23430 PF03230 Antirestriction protein