CHC44_RS00075 NONE
CHC44_RS00080 NONE
CHC44_RS00085 NONE
CHC44_RS23985   14407 ..   14417 +  -2.4  -4.33417   TTCGTCTCAATAATG                 CGGC GGC GGCG                 TTTCTTCTGCCTGAG  59 28
CHC44_RS00095   15665 ..   15686 +   -13  -6.09888   AATAAAAACTGAGAG           CCGCCGCT TGTAAT AGCGGCGG            TTTTTTTTATTCAGG 100 36
CHC44_RS00100 NONE
CHC44_RS00105   17033 ..   17045 +  -2.7  -2.53748   CGATCGGGTGGTGCA                GTTTT AAT GAAAC                GTATTGCATTTGTCT  40 19
CHC44_RS00110 NONE
CHC44_RS00115   17746 ..   17768 + -10.6   -4.7268   CGCCCTAAAATTCGG           CGTCCTCATA TTG TGTGAGGGCG           TTTTATTACGTGTTT  95 81
CHC44_RS00120 NONE
CHC44_RS00125   18782 ..   18805 +  -8.9  -4.21275   GTCATAGTCACCAGG          CGGGCG-CTT CAGGT AAGTCGCCCG          TTTTGGATAACTTAA  82 51
        fusA   20994 ..   21019 + -13.3  -2.78935   AAAAACCAAAATCCC         GTGCTCTCTCC TGAA GGGGAGAGCGC          TATAGTAAGGAATAT  85 52
         tuf   22253 ..   22268 + -11.8  -5.11063   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT 100 55
CHC44_RS00150   22601 ..   22611 +  -5.4  -5.78622   TTAAAGAGATCGCCT                 GAGT CAC ACTC                 TTTTTTTTGACATCC 100 24
CHC44_RS00155   23154 ..   23176 +  -5.7  -2.52623   GGTTACCGATTAACC          GTCTGGAAAG AAAA CTTTCCA-AC           CTGTTATGAAACCCG  49 28
CHC44_RS00165   23865 ..   23879 +  -6.4  -3.58343   GATTTGAACCTCGAA               TAGCCG ATT TGGCTA               TTTAACAATGCTCCC  62 73
CHC44_RS00170 NONE
CHC44_RS00175 NONE
CHC44_RS00180 NONE
CHC44_RS00185 NONE
CHC44_RS00190 NONE
CHC44_RS00195 NONE
        rplV NONE
CHC44_RS00205 NONE
CHC44_RS00210 NONE
CHC44_RS00215 NONE
CHC44_RS00220   28974 ..   28999 + -12.7    -5.252   CGCATTCTCAACGAA         TAAACGGCTCA GCGA TGGGCCGTTTA          TTTTTTCTACCCATA 100 48
CHC44_RS00225 NONE
CHC44_RS00230 NONE
CHC44_RS00235 NONE
CHC44_RS00240 NONE
CHC44_RS00245 NONE
CHC44_RS00250 NONE
CHC44_RS00255   32004 ..   32014 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
        rpsE NONE
CHC44_RS00265 NONE
CHC44_RS00270 NONE
CHC44_RS00275 NONE
CHC44_RS00280   34676 ..   34705 + -12.3   -4.6645   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 55
CHC44_RS00285 NONE
CHC44_RS00290   35544 ..   35562 +  -4.4  -4.15508   CGTCCGCCGAAAAAA             CGTCGCGT ATA ACGCTTCG             TTTTCCAGGTTAGTT  64 14
CHC44_RS00295   36194 ..   36212 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  74 10
CHC44_RS00300 NONE
        rplQ   37669 ..   37682 +  -9.5    -5.626   AGTAACGTAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATACCCTC 100 46
CHC44_RS00310 NONE
CHC44_RS00315   38571 ..   38592 +  -5.8  -3.61244   GTTGATTTATTGAAC           CGGCG-GGG CTACA CTCGCGCCG           TTAATTTATACAATC  59 36
CHC44_RS00320   38884 ..   38918 +  -2.1  -5.09426   AATAACACTTCCTCT    TTAGAAGGCGCTGGCG GAGC TGCCGGC-TCTTCTGC     TTTTTTACGGTTGAG  74 22
CHC44_RS00350 NONE
CHC44_RS00355 NONE
CHC44_RS00360 NONE
CHC44_RS00365 NONE
CHC44_RS00370 NONE
CHC44_RS00375   47575 ..   47599 +  -4.1  -4.08767   GCAGGCCCGATCTCT          CAGCATCGCTC AAG GGGCGGATCTG          TTTTACCGGACTGCC  60 87
CHC44_RS00385   50079 ..   50092 +  -2.3  -2.72471   AAGAACTGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 36
CHC44_RS00390   50255 ..   50290 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
CHC44_RS00395   53361 ..   53373 +  -3.3  -3.05816   AGAGACGATTTTCAG                CACTG ATT CAGAG                TTGAGTACGCAATAA  45 56
         rrf NONE
CHC44_RS00405 NONE
         rrf   53878 ..   53927 + -23.3  -4.09117   GGAACTGCCAGACAT CAAATAAAACAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TTGTTTGTCGGTGAG 100 28
CHC44_RS00430   60645 ..   60662 +  -4.1  -3.63968   TCATTTTCTACCCCT             TCTGCCA CAAT TTGCAGA              TTTAACGCTTTCGCC  53 194
CHC44_RS00500   75784 ..   75811 +  -5.6  -3.85698   GATTGCTGCTGATTT        TTTCAGCCCTGAG GGA CTCAG-GCCGAGA        TTTGTAACAAAGGAA  61 172
CHC44_RS00515   76971 ..   76985 +  -2.8  -2.75064   ATGCACGGCGGCGAC               CTGTTC AGC GAAGAG               TAGTTGGATACGGGC  41 8
CHC44_RS00520 NONE
        mreD NONE
CHC44_RS00530 NONE
CHC44_RS00535 NONE
CHC44_RS00540 NONE
CHC44_RS00545   86369 ..   86382 +  -5.3  -3.96999   TCACTACCTGCACTT               TAAGC GGCA GCTTA                TCTTTTTCGGTGTAC  63 240
CHC44_RS00555 NONE
CHC44_RS00560 NONE
CHC44_RS00565   90515 ..   90533 +  -8.1  -5.65177   GCTAACCCACAAGAA             CCGATGC CAAAA GCGTCGG             TTTTTTTATGACTAT 100 36
CHC44_RS00570   91166 ..   91182 +  -4.3  -3.06261   AAATGGTGCCCATCG              GTTGCAG ATT CTGCGCC              TGTTCCGCGTTGACC  47 243
CHC44_RS00590   93845 ..   93864 + -12.8  -3.98913   CTGTTCCTGCCCGAT            GCCGGGGC TTTT GCTCCGGC             TTCTTTGACTGTAAA 100 42
CHC44_RS00595 NONE
CHC44_RS00600 NONE
CHC44_RS00605   96700 ..   96718 +  -4.5   -2.5474   ATCCTTTTCCCTTTT             CATCCGT AATTA ACGGAAG             CTGTTCTGACTAAGG  46 17
CHC44_RS00610   97619 ..   97632 +  -2.4  -2.98447   TTACACCATTACGTC               TCAC AGCGGA GTGA                ATTTCTGATGACTAA  41 4
CHC44_RS00615   98391 ..   98407 +  -3.6  -3.82519   TAGCCCCATTATCGT              GCCTCC TGCCT GAAGGC              TATTTTATGACTAAT  53 159
CHC44_RS00620 NONE
        oadA NONE
CHC44_RS00630 NONE
CHC44_RS00635  102521 ..  102543 + -10.6   -4.4078   TGACTAGCCGTCGAA           CGACGCAG GCAAAAG CTGCGTCG           TTTTAGTTCGACGCC  90 34
CHC44_RS00655  107108 ..  107129 +  -3.8  -2.87132   GACCCCACGTTACAA           GAGAGTTT TTTCCC AAACTTTC            TCTGTGCCGGCCAAA  46 185
CHC44_RS00660 NONE
CHC44_RS00665 NONE
CHC44_RS23990 NONE
CHC44_RS00670 NONE
CHC44_RS00675 NONE
CHC44_RS00680  110451 ..  110468 + -12.7  -4.97158   TAGTAAAATAATCAA             CAGGCCC TGAA GGGCCTG              TTTTGTTTGGTCTCC 100 30
        nanR  111378 ..  111400 +  -4.8  -3.60925   CCCGGTTTAGTGAAG           CAGATCGC ACTATAA GCGTTCTG           TATTATTTGCTGCTT  57 57
        nanA NONE
CHC44_RS00695  113986 ..  114008 + -16.4  -3.52113   GAAAAGTTAATCCGC           TTGCCCGGTT TTC AACCGGGCAA           TATTTGTAAGGGAGT 100 31
CHC44_RS00700 NONE
CHC44_RS00705 NONE
CHC44_RS00710  116526 ..  116542 +  -4.4  -3.61654   AGCATCTCTTTCACC             CG-CGTG ACGC CACGACG              TTTCGGGTAAGTGTC  55 499
CHC44_RS00740  126603 ..  126616 +  -2.3  -4.56775   GGAGACTAAAAATGG               CAGGC TTTG GCCTC                TTTTTAAGAGGCGGT  61 520
CHC44_RS00745  127566 ..  127591 +  -8.3  -2.60813   TGGATACCACCTGTA         GCGTAGCGT GATGAGGG GCGCTACGC          ATATTTCGCACAATA  63 20
CHC44_RS00750  130049 ..  130065 +  -2.1  -3.86266   CCAACACCAGGGAAA              TCGTGGC TGC GCCGTGC              TTATTATGATGATGT  53 73
CHC44_RS00755 NONE
CHC44_RS00760  131621 ..  131632 +  -7.2  -3.30124   ATTTTGCCGATTGGC                GGCG CGAA CGCC                 TTATCCGGCCTGCGA  63 40
CHC44_RS00830 NONE
CHC44_RS00835 NONE
        mlaD  142895 ..  142909 +  -2.1  -2.54325   GCGCAACGAAATAAT               CTCAG GAGAA TTGAG               GTATGTTTAAACGAC  39 27
CHC44_RS00845 NONE
CHC44_RS00850  143935 ..  143950 +    -9   -2.9911   CCGGCACTTTTACCG              CGCTGA TTTA TCAGCG               TAATCTTTTGCTTAT  68 117
CHC44_RS00855 NONE
        murA  145615 ..  145644 + -14.4  -4.08692   CTTCTGTACGCTGAA       TAACCCCCGCGA ACGCGA TTGCGGGGGTTA        TTTTACAGGCACTTA 100 42
        rplU NONE
CHC44_RS00880  148022 ..  148042 +   -14  -4.75174   CGGTAACGGATGAAA            GCCCCGCA CCTGT TGCGGGGC            TTTTTACATTCGATG 100 54
CHC44_RS00885 NONE
        obgE  150324 ..  150343 + -16.4  -4.94147   GCCTACAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 73
CHC44_RS00900  152614 ..  152628 + -12.8  -4.36914   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 74
CHC44_RS00910  153826 ..  153840 +  -2.8  -3.40899   TAGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  47 84
CHC44_RS00920  155845 ..  155864 + -12.8  -5.75538   TAGCGCTCACCGAAA            CCCTGGGG CTTG CCCCGGGG             TTTTTCTTTTTTAAC 100 65
CHC44_RS00925 NONE
CHC44_RS00930  158194 ..  158208 +  -5.7  -4.00469   GCTTAAATTGCCCTT               GCGAA GGTCA TTCGC               TTTGGTTAGTATTCA  63 132
CHC44_RS00935 NONE
CHC44_RS00940  158758 ..  158773 +    -9  -5.92337   ATATTCCGAAAGAAA              GACGCT GAAA AGCGTC               TTTTTTTTCGTCTGT 100 41
CHC44_RS00945  160191 ..  160206 + -11.8  -3.08679   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC  81 74
CHC44_RS00955  162118 ..  162133 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 152
CHC44_RS00960  162626 ..  162644 +    -3  -3.07487   TGAGTAATATCCAGA             AGGCGAAC CTG GTTCCCCA             CTTTTAACAGTCTGG  43 0
        nusA NONE
CHC44_RS00970  167061 ..  167075 +  -9.2  -5.61913   CAAGAAATTTAAAAA               GGGGCT TAT GGCCCC               TTTTTTGTCTTTATT 100 202
CHC44_RS00975 NONE
CHC44_RS00980  168500 ..  168514 +  -2.8  -3.95071   GTAGAATACCGCCGC               TTAACG TCG CGTAAA               TTATTTAACAGTTTA  54 75
CHC44_RS00985  168893 ..  168909 + -10.8  -5.00884   GAGTTTCAGAAAGAG              GGGGCC TTCAT GGCCCC              TTTTTTCCAGCAGAT 100 48
         pnp  171259 ..  171279 + -18.3  -3.57792   GTAAGGTAGCCTTTT            GCCCTCCGC AGT GCGGAGGGC            TTTAGACCTGGCTGG 100 37
CHC44_RS00995  172275 ..  172300 +  -7.5  -4.04023   CGTAATCTTTTTGAT         TGCCATCACCT TCGC GGGTGAGGGCG          TTGTTGTTCGTTAAT  72 59
CHC44_RS01000  174353 ..  174375 + -13.4  -6.11392   AAAGTAAAATATACA           GCCCCGATCG TCA CAATCGGGGC           TTTTTTTATTTCTTT 100 69
CHC44_RS01005  175901 ..  175935 +  -8.4  -3.89215   ATTTCATCCGCCTGG     GTCTCCCGCAGGATGG ATT CCAGCCCGTGGCGGAC     TTTCGCTTTATCACC  71 219
CHC44_RS01025 NONE
CHC44_RS01030  180152 ..  180188 +  -5.9  -3.75169   CAAACGCTTCGCGTT   CCG-TCACAAGGCGCT CTTTCT GGCGCTTTGTGAGCTG    TTTGATGCGATACTC  60 74
CHC44_RS01040  181228 ..  181245 +  -3.3  -5.72207   AATAGCCTTATCAAT             GGTGACG CTGG CCTCGCC              TTTTTTTCCTTTCAC  89 365
CHC44_RS01050  182207 ..  182218 +  -7.2  -3.43338   CATTCTTATCGCCAC                CCGG CACA CCGG                 TTACTTAATATACGT  65 80
CHC44_RS01075  187105 ..  187115 +  -3.2  -3.89822   AACCTTCGTTAAACG                 TGGT AAT ACCG                 TTTGTCGCATCAATG  54 392
CHC44_RS01130 NONE
CHC44_RS01135  198854 ..  198871 +    -7  -4.08064   TCAAACATATGAAAA             CATGGC CCTTAA GCCATG              TTTTGCGAGGCGCTT  70 221
CHC44_RS01145 NONE
CHC44_RS01150  202694 ..  202722 + -10.2  -2.64803   TCGCTAACGACGTTG        TGCCCGGATGGC GTGTA GCGATCCGGGCC        TGAATTTCAGGCTGG  70 34
CHC44_RS01155 NONE
        rnpB  204678 ..  204699 + -10.1  -4.93365   CATCTCTTCATAAAA           CCCGTCAGT GTAA GCTGGCGGG            TTTTTGCTTATCAGG 100 368
CHC44_RS01180 NONE
CHC44_RS01185 NONE
CHC44_RS01190 NONE
CHC44_RS01195 NONE
        pflB  212365 ..  212404 +  -2.7  -3.08798   TTACTCAGGCGATGT  AACGTGAACGGGGCGATC GTGTG GATCGCCCCGCA-ACGGA  TCTTCGCTGAACGGT  43 24
CHC44_RS01205  213861 ..  213880 +   -15  -5.58179   CAGAAGTTGAGAAAA            GGGCGCAC CAAA GTGCGCCC             TTTTTTGTTGTGATA 100 86
CHC44_RS01210 NONE
CHC44_RS01215  217006 ..  217018 +  -5.5  -4.07885   TGGCGTTCATCGTCT                CCTGT ACG GCAGG                TTTTACCACGGGCTG  65 248
CHC44_RS01230  218790 ..  218800 +  -8.2  -3.53012   GCCGGAAAATAAATA                 GCGC GCG GCGC                 TTTAAAAGCGGCGCC  67 29
CHC44_RS01280  224386 ..  224400 +  -5.6  -3.17051   GAACCGTAATGGTAA               TTGCCG CGC CGGCCA               TATTGATAGTGGCGC  52 354
CHC44_RS01310  230915 ..  230931 +  -9.4  -2.66733   TTCCGGACGCAGACC              GCCTGC CTGCT GCAGGC              TGGTATCAATTCCCC  59 499
CHC44_RS01330  236067 ..  236107 + -12.7  -2.78384   GGTAGCAATGGTAAT G-ACATCCGCCCGGT-AGC AACAG GCTTACCGGGCGGATGCGC TCTGATAGAAGGCGG  82 52
CHC44_RS01335  238226 ..  238240 +  -7.8  -5.40072   GCCATTGCGCGCCGT               TCGCGG TAA TCGCGA               TTTTTTTCCGCCCGC 100 258
CHC44_RS01345  239670 ..  239687 + -11.3   -3.5275   GTCAGAAACAAAAAG             GCCACTC TTTA GAGTGGC              TTAATTATATGATTT  85 59
CHC44_RS01355  240510 ..  240527 + -14.1  -3.95073   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 112
        tsaD  246183 ..  246209 +  -5.8  -3.01712   CCGGTCAACCCTTGT        GGGCCG-ATCC CCAGAC GGTTGCGGCCC         TCTTCCAGACGCAGC  52 227
        folB  247352 ..  247370 +  -3.1  -3.40051   AAACGGTTATATATG             GGGTCTT AACGC GAGATCC             ATTTTTGCAGTGTTT  48 69
CHC44_RS01395  248299 ..  248330 + -11.6  -3.64822   GTCTGATAAGCGCAG      CGCCATCAGGCA ATTTATCG TGCCGGATGGCG       TTTAGCTGGCGGGGT  87 97
CHC44_RS23995 NONE
CHC44_RS01410  251858 ..  251887 +  -8.5  -2.94708   TATGCGGACTTGTAG       GCCGGAT-CAGGCG AAA CGCCGCCATCCGGC       ATTATTTAAAGGATA  65 90
CHC44_RS01415  254737 ..  254749 +  -5.5  -3.82484   GCAAGCTGGCGGAAG                TGGCT GGT AGCCG                TTTGAATTATGCTAT  61 8
CHC44_RS01420  256316 ..  256329 +  -2.3  -5.76949   TTCGACGCGTATCTC               GCGGT TGAC GCTGC                TTTTTTTTCGACCTA  91 106
CHC44_RS01440  259523 ..  259550 +  -9.8  -4.93316   ATTATTCAGATCTTA        TATGAGCGGGCC GTCA GGCCCGTTCACG         TTTTTACTCTTGTTG  93 68
        ribB  260968 ..  260987 + -12.2  -5.50925   TCATGGTTGAAAAAA            GCCGATGA GATG TCATCGGC             TTTTTTGTATTCCTT 100 50
CHC44_RS01470  264883 ..  264929 +  -2.3  -4.19177   AGCGCATATCCTTGA CG-GGCAGCCGGATGT-TGCCT GGCTAA AGGCCTGCATCCGGC-GCGACG TTTCTCTTAACCGAT  57 39
CHC44_RS01480  267061 ..  267079 +  -2.4  -4.08064   AACAGCGGCAACAAC             GCTTTATT GGA GATAATGC             TTTTCCAGGCCGGTT  56 448
CHC44_RS01505 NONE
CHC44_RS01510 NONE
CHC44_RS01515 NONE
CHC44_RS01520 NONE
        parE  274827 ..  274846 +  -8.6  -2.94365   TCTCGCGGATCTCGA            CGTGTAAC GGTT GTTGCACG             CTTTATCCGGTCTGC  65 19
CHC44_RS01550 NONE
CHC44_RS01555  279490 ..  279528 + -14.7  -3.31726   GTTAACTTCCTCGCA   ACCTGTCTCACGGTTTG TGACT CAGACCGTGAGATAGGG   TATTATCTGCGGCAA 100 36
        parC  281903 ..  281946 + -13.3  -3.61103   CCATCCGGCGCTCTG CCGT-TGCCGGATGACGACGC AGTA GCGTC-TTATCCGGCCTACGG TTTCAGATCGGATTA 100 80
CHC44_RS01565  282878 ..  282898 +  -3.9  -4.18762   TAGAAATCATTTTTT            CAGGCACAA CTC TTTAGCCTG            TTTTACATGGAGCTT  62 61
CHC44_RS01570  284334 ..  284369 +  -5.4  -4.07568   AGCGTCGTAAAGCGT    CCGAGTACGGGTCTG AATAGCG CAGACCCGT-CAGGG    TTTTCAGGAAGGAGC  65 31
CHC44_RS01590  290058 ..  290069 +    -3  -3.98981   CCAGAGGAGGGGATA                TCAT GGGT ATGA                 TTATTATTCCCTGTT  54 226
CHC44_RS01595  290428 ..  290447 +   -15  -4.00782   TATGCCTCACGAATT            CTGGCCGC CAGC GCGGCCAG             TTTCTCATCATCTGC 100 199
CHC44_RS01620  295788 ..  295802 +  -5.6  -2.61912   CAACGAAGCGTAACC               GGGCCA TCC TGGCCG               ATTATGGATACGTCA  50 62
CHC44_RS01635 NONE
CHC44_RS01640 NONE
CHC44_RS01645  299240 ..  299267 +  -9.9   -5.4833   CTGCTGACGCTGTAG       GCCGGGTAAGGCG AAGT CGCC--ACCCGGC        TTTTTTATTGCCTAA 100 46
CHC44_RS01665  301753 ..  301768 +  -3.2  -4.43911   ATGAGATTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 30
CHC44_RS01670  302783 ..  302798 +  -7.6  -2.81055   CGATAACGAGAGTGC              GTCATC GTCT GATGAC               TAATCTCTTATATTC  58 286
CHC44_RS01675 NONE
CHC44_RS01680 NONE
CHC44_RS01685 NONE
CHC44_RS01690 NONE
CHC44_RS01695 NONE
CHC44_RS01700 NONE
CHC44_RS01705 NONE
        hybD NONE
CHC44_RS01715 NONE
        hypA NONE
        hypC  311628 ..  311653 +  -6.3  -3.28712   TATATCGCTCTATAA         TCGTTATATAA TTAT TTATATATCGA          TTATGGGGCGAAACC  59 59
CHC44_RS01730 NONE
CHC44_RS01735  313543 ..  313563 +  -3.9  -3.25652   TTTTCGAAGTCGCTG            GCGTCATGG CGT TCGTGAAGC            TGTTCGTTCAATGGG  47 136
CHC44_RS01745  316462 ..  316498 + -13.8  -3.81488   TAACGGGGTCATTCT   C-GTCGGGATATCGGCG TGGG TGCCGATATCCCGCCTG    TTGTGTTTACCAGCG 100 38
CHC44_RS01755  318306 ..  318339 + -16.9  -3.18582   TGGCTGTGTTTGTTT     ACCCGAATCACTTAC CTTA GTAAGTGATTCGGGA      TTAATCAGTAACCTC 100 154
CHC44_RS01775  324428 ..  324447 +   -15  -3.25539   GCTACCGGGTTCTAA            CGGCCACC TTCG GGTGGCCG             TCTTCATTACCCTTA  95 76
CHC44_RS01780 NONE
CHC44_RS01785  326787 ..  326798 +    -3  -5.46698   GAATAGTTTGTTTTT                TGAT TTAA ATCA                 TTTTTTAGTTTTCAC  79 199
CHC44_RS01790 NONE
CHC44_RS01795  328220 ..  328233 +  -5.2  -3.69354   TAATGCAGGAAGGAA               CGCC GGGCCG GGCG                TTTAACATTATCCCA  57 41
CHC44_RS01805 NONE
CHC44_RS01810  331670 ..  331680 +  -3.2  -4.09805   TGAAAGCCATAAACA                 GGGT TGA ATCC                 TTTAATTGTTCGTCA  57 19
CHC44_RS01815 NONE
CHC44_RS01820  334058 ..  334074 +  -6.6  -3.09234   TGTACCGAGGACATT              CTGGTT CGGGA AACCAG              TTCCGTGCGATTTAT  54 164
CHC44_RS01830 NONE
CHC44_RS01835  338604 ..  338617 +  -3.8  -3.85698   AATCTGTTTACACGC               CGCA GCAGGA TGCG                TTTCTGCCAGCACAA  56 418
CHC44_RS01845  340055 ..  340070 +  -5.4   -3.3761   GATTACTCGCCCGGG              CAGGGA TCTT TTCCTG               ATTTTATTAACAGAG  56 9
CHC44_RS01850 NONE
CHC44_RS01855 NONE
CHC44_RS01860  342609 ..  342625 + -10.9  -2.62616   TCGAACCAAGGACAC              GGGGATT TTC AATCCCC              TGCTCTACCGACTGA  66 217
CHC44_RS01880  346209 ..  346219 +  -4.6  -4.24948   ACACGGTCTGCCAGT                 CGGT AAT GCCG                 TTTTGAGTGTAATAC  66 209
CHC44_RS01910 NONE
CHC44_RS01915  351321 ..  351342 +  -9.3  -3.11024   GGGACTAATAAGTAC           AGGGTCGGC AAAT GCCGGCCCG            CTTTGTCTTGAGGGA  68 33
CHC44_RS01920  352102 ..  352122 + -15.5  -5.35365   TTCTTTTTAAACAAT            GGCGCAGAT CGT ATCTGCGCC            TTTTTATTCTGTTTT 100 45
CHC44_RS01925  353325 ..  353346 + -15.1  -3.24708   AGTATTAAAGATAAT           GCCCCGGTC GGAA GGCCGGGGC            TATCTTTGGAAGATC  95 33
CHC44_RS01930  354493 ..  354544 + -12.5   -3.9461   TAACCGCCACAGGTC GG-TAAG-C-GTCGCGCCATCAGGTA TTT TACCCGCTGGCGCGACAGGCTTATCC TTGTTATTCCGCGAG 100 61
CHC44_RS01960  358935 ..  358951 +  -2.1  -3.08812   TGTATCCTGGCGAAC              CGGCGTT AAA ATCGCAG              CTTTGTTAAAACCAC  42 108
CHC44_RS01965  359945 ..  359983 +  -9.5  -3.53761   AGTGCCATCCATATT   GAGCGGTAGCCCGACAA TAATT TCGTCCGGCTGCCACTC   TTTCAGCAAACGTTC  71 300
CHC44_RS02010  367680 ..  367697 +  -6.3  -4.52703   GACTGAACAAGGGCG             CTCTTGT TAAC GCAAGAG              TTTTCTCGTGGTTTC  76 244
CHC44_RS02020 NONE
CHC44_RS02025  369892 ..  369919 + -13.6  -4.94487   GAGTATTCCGCTTGT        GGGTCGATTTAA TTAT TTAAGTCGACCC         TTTTATATTTTATAA 100 45
CHC44_RS02030  370789 ..  370819 +  -4.7  -2.87344   GTTATGGGAATCAGC      G-CCTTTCCTGCCG AGTC TGGTGGGGAAGGAC       TGTGTGACGCGCATA  48 66
CHC44_RS02035  372196 ..  372218 +  -8.5  -3.93288   CCTGACAGTACCGGG          GCGA-GATCG TGGT CGATCATCGC           TTTAATTGCATACCC  76 519
CHC44_RS02050 NONE
CHC44_RS02055 NONE
CHC44_RS02060 NONE
CHC44_RS02065  377070 ..  377102 + -11.3  -4.79756   TTTTCTGACTTCAGA      GCCTTTTCGCGTTGA GGC TAATCGCGGAAAGGC      TTTTTACGTTCTGTA 100 116
CHC44_RS02070  378266 ..  378298 + -12.7  -5.80817   GTAAACAAATTCAAA      CCCTTCCTCGTCG GGCCTAA CGACGCGGGAGGG      TTTTTTTATATTGAC 100 163
        speB  379554 ..  379577 +  -4.6  -4.57073   TTCGGACTCCTGACG          CTGGGAGAACT GCG AGTTCACC-AG          TTTTTCGCCAAGATC  71 327
         tkt  382398 ..  382417 +   -15  -5.08088   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTATTCCCCCTT 100 45
        gapA NONE
CHC44_RS02125  388085 ..  388104 +   -15   -3.6053   AAGAAGTAATCGTTA            CGGGCAGG GATT CCTGCCCG             TTGATTTATCGCCGA 100 32
CHC44_RS02130  389279 ..  389298 + -12.2  -5.73339   GTCTGCTGATTGAAA            TGGCTTCC CTTG GGAAGCCA             TTTTTTTATCGTTAT 100 45
CHC44_RS02135  390411 ..  390433 +  -4.1  -3.73302   TCTCTGGTTATTGAG          CGGATAAGCG TAGC CGCC-ATCCG           TTATTCAGTCTCTTC  55 90
CHC44_RS02140  391169 ..  391185 +  -3.7  -3.54475   TCGCGCATATGCACG              CGCTT TTCAACT AAGCG              TTGTCTGATGGACAA  52 12
CHC44_RS02145  392028 ..  392053 + -12.5  -4.39828   CACGCAGTAATCTCG         CCCGGCCTGGG CGCT TCCAGGCCGCG          TTTTCTCCCGGTGTT 100 31
CHC44_RS02160  394047 ..  394060 +  -2.4  -2.92924   GTCAGGGCAAATTTG               GTGA CATGTA TCAC                GTTTAATCGTTTGCC  41 78
CHC44_RS02165  395505 ..  395526 + -11.6   -3.0955   CTAATTTCCTCTAAA           TGGGCAGG AGATGA CCTGCCCA            TCCTTTCTCTGGTTT  79 37
CHC44_RS02190 NONE
CHC44_RS02195 NONE
CHC44_RS02200  400375 ..  400386 +  -7.2  -3.30124   GTAAAAATACCGGAT                GGCG GCTT CGCC                 TTATCCGGCCTACGG  63 93
CHC44_RS02205  401681 ..  401707 +  -5.8   -3.8901   AACCCGTCACACTTT        GCTTTCCCGGC TATCGC GCCGGG-GGGC         TTTCCTCGTTTGAAA  63 71
        gcvT  403161 ..  403181 +  -8.9  -2.84946   AAACCTGTTTTTGTG            CGTAACGGC AAA GCCGTCGCG            TGATTCATCCTTTTT  67 2
        gcvH  403646 ..  403661 +  -5.4  -3.41359   GCCTACTCACTGCAA              CGCGAA TGAT TTTGCG               TATTCGTTTTCGCAC  56 72
CHC44_RS02220  406661 ..  406674 +  -9.5  -4.24123   CGACTGTTTTCTAAA               GGCGC TTCG GCGCC                TTTTCAGCTTGTTAA  84 51
CHC44_RS02225 NONE
CHC44_RS02230  408296 ..  408307 +  -4.4  -3.94823   TCGGTAGTCGTCGTT                GATG CTGC CATC                 TTCTTCTACTTTGTC  60 337
CHC44_RS02240  410071 ..  410081 +  -5.4  -3.86897   AGAGGCGCAGTTCAT                 CGTT ATG AACG                 TTTCTCCGGAGTAAG  63 161
CHC44_RS02245  410764 ..  410797 +    -3  -3.30124   ACAGGCGTAATTCCC     GG-ATGCCCGTGCCG GATGG CGGCGCTGTCGTACC     TTATCCGGCCTACGA  46 31
CHC44_RS02250  411285 ..  411300 +    -9  -3.73336   TTCAATATCCAACGC              CAGCCA CTGT TGGCTG               TTATTCAGTTCGGCT  77 353
CHC44_RS02265 NONE
CHC44_RS02270  412827 ..  412848 +  -2.2  -4.15044   AGGTTTCAGGCGTAG           TGTTCGGC CATTTC GCCGAGAA            TTTGTTCACACCAGG  55 88
        xerD NONE
CHC44_RS02285 NONE
CHC44_RS02290  416860 ..  416885 +  -9.1  -3.30903   TTCGCTGTAATTAAG         GGGCGAAAT CCGCTAAT ATTTCGCCC          TTATAACCGCATTTT  71 62
        prfB NONE
        lysS  419563 ..  419593 + -17.7  -3.18366   AAATAAGATGTAAAT      TGCCGGATGG-GGC ATCA GCCGCCATCCGGCA       TCTCTTCGTTCAGGC 100 35
CHC44_RS02315 NONE
CHC44_RS02320  421647 ..  421674 +  -4.1  -5.12617   GTCCAGCCCGTCAAG        CGGGGAGTAGA CACCGA TATAATCCCCG         TTTTTTAGGTGGTTC  77 321
        vapB NONE
        vapC  423826 ..  423846 + -11.9  -5.99154   TTCTGACATGTTTAC            GAAGGGAGT ACC GCTCCCTTC            TTTTTTTGTTTCCTG 100 235
CHC44_RS02355 NONE
CHC44_RS02360 NONE
CHC44_RS02365  426128 ..  426144 +  -5.1   -5.4593   TTACGATCATAATCA              TCGATCG TAT CGATCTA              TTTTTATTGTTTTAA  87 516
CHC44_RS02370  426970 ..  426995 +  -4.7  -4.61868   TAACGACAGGGAGAA         GCCGTCC ACGGAGGGGATC GGACGGC          TTTTATATCTGACTG  71 55
CHC44_RS02375 NONE
CHC44_RS02380 NONE
CHC44_RS02385 NONE
CHC44_RS02390 NONE
CHC44_RS02395  432908 ..  432925 +  -4.9  -2.93747   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  50 126
CHC44_RS02405  434282 ..  434305 + -12.5  -3.88396   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 23
CHC44_RS02420  437143 ..  437156 +  -2.4  -5.41143   AGCGTCATTTCCTTT               GTGA TAAAAC TCAC                TTTTTTTAAACAATC  77 60
CHC44_RS02425  438632 ..  438660 + -12.5  -2.74605   GCATACAGCATCTGG        CGCACATGTCTGA AAA TCAGACAAGTGTG        TAAATTTTAGCGCCG  82 248
CHC44_RS02435 NONE
CHC44_RS02440 NONE
        kduD  440556 ..  440573 +    -7  -5.69473   AAAAAACTGATAAAG             CCCTGT CCTCGT ACAGGG              TTTTTTTATGATCTC 100 87
CHC44_RS02450 NONE
CHC44_RS02455  443508 ..  443518 +  -4.6  -3.71848   ATTTAGCGTTAGTAA                 CTCG GTA CGGG                 TTGTTCCTGCCGGGG  55 447
CHC44_RS02465  445622 ..  445657 +  -9.7  -2.86164   GCGGGATGCGTAATC   CGGC-CTG-GCGCAGCG CTTT TGCCGCGCCCAGCGCCG    TGTCATCATTACAGG  65 274
CHC44_RS02480 NONE
CHC44_RS02485  451692 ..  451702 +  -2.4  -4.62302   GCGATATCGACGTAG                 GCGG CAA CGGC                 TTTTTGCGCCTGTTC  65 326
CHC44_RS02510 NONE
CHC44_RS02515  458301 ..  458325 +  -9.2  -3.37354   TTATTCGCACCTTTG          GAGCGTCTGC AACGC GCAGGCGCGC          TTATCAATCGCTATC  71 167
CHC44_RS02520 NONE
CHC44_RS02525  460073 ..  460092 +  -7.1  -5.81032   ACGATCCTGCCATAA            CCGACGT CATTGC GCGTCGG             TTTTTTTTACCCTTC 100 47
CHC44_RS02535  460690 ..  460717 +    -4  -3.37796   GCGAGCGTAATGAGG        CCGCCACGTG TCAATAAC CACGCGGGGG         TTCTCGCTACTGGAA  50 9
CHC44_RS02540 NONE
CHC44_RS02545 NONE
CHC44_RS02550 NONE
CHC44_RS02555 NONE
CHC44_RS02560 NONE
CHC44_RS02565 NONE
CHC44_RS02570  473814 ..  473826 +  -9.1  -3.30124   TTCTCGCCGGATGGC                GACGC GTA GCGTC                TTATCCGGCCTCCAA  71 47
        amiC  476801 ..  476814 +  -8.1  -3.41636   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT  65 114
CHC44_RS02590  478277 ..  478295 + -10.3  -5.88565   AAAATAGTGAGCAGG             GGTGAGG AATAA CCTCACC             TTTTTTTATTCTGAG 100 96
CHC44_RS02595  479554 ..  479576 +  -2.9   -2.9348   ATAATGTTTCAATCG          TTATCGATGT CATC ACATC-ATAA           TGTATAAACTTTCGC  42 457
CHC44_RS02615  482451 ..  482470 + -10.7  -2.57423   GTTATACAAAAAAAA            GCACCGC AATATG GCGGTGC             TACATTAATCACTAT  74 47
CHC44_RS02620 NONE
CHC44_RS02625 NONE
CHC44_RS02630  485205 ..  485249 + -16.6  -3.30771   ACGAGCGATAAAAAC GCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGC TTATCCGGCCTATGA 100 30
        fucA NONE
CHC44_RS02665  493630 ..  493642 +  -4.9  -3.95073   CAATATCGCGGCAGA                GAAAT GCC ATTTC                TTTATGCGTCTCAAG  61 194
CHC44_RS02675  494612 ..  494632 +  -9.6  -3.16608   GGTTCGCTGGTACGG            CGCAGCGC CATAC GCGCGGCG            TTGACTGCTTTGACT  68 155
CHC44_RS02700  500830 ..  500841 +    -3  -2.95093   AATGTTTTTGCGCAC                TTTC ATAT GAAA                 ATTTACTTAAGGTAT  42 157
CHC44_RS02705  501235 ..  501260 + -17.7  -6.44931   GCTGCGAAACGAACC         GGGAGCACTGT TTAT ACAGTGCTCCC          TTTTTTTTTGTTATT 100 106
CHC44_RS02710 NONE
CHC44_RS02715 NONE
CHC44_RS02720  503205 ..  503217 +  -3.3  -5.01535   TGTTGCACGGTGAGT                GTGTG TGG CGCGC                TTTTTATACTTCTCC  76 340
CHC44_RS02730  504708 ..  504719 +  -4.4  -2.64099   TATTGAACTGAAACC                TGTC GCAG GACA                 ATTATCATGACAACG  46 4
CHC44_RS02735 NONE
        gudD  507435 ..  507454 + -13.6  -2.90061   TGCGTTAAGTCAGAG            CCGGTTCC GTAA GGAACCGG             TGCTTCTCTGGGTGT  87 33
CHC44_RS02745  509056 ..  509092 +    -5  -3.85698   TAAACTCAGCCGGTT   CC-GGCGCCATCAGGCGC GCT GCTAC-GTTGGCGCCAGG   TTTATAGCGCAGCAA  61 434
CHC44_RS02755  512807 ..  512833 + -10.9  -2.52464   CGCATGTAATGATTA        CC-GGCTTACCG ACTT CGGTAGGCCTGG         TCCCTTAAGGAGAGG  74 32
CHC44_RS02760  515324 ..  515338 +  -4.3  -3.92869   CTTCGGCTGTTCAAA               TTCGT ATCAG ACGAA               TTTGTCACTGCGTCG  59 263
CHC44_RS02800  523700 ..  523710 +  -4.6  -2.88788   CGTCAAAAACATTTA                 CCTC AAA GGGG                 CTATTTTCTCCCTCC  48 100
        pyrG  525505 ..  525528 + -13.9  -4.08164   AAAAAGTTAGAACGG          CGGTGCACC CTCAGC GGTGCACCG           TTTGTCTGAAGTTTT 100 40
CHC44_RS02810  526899 ..  526912 +  -9.5  -5.77988   CTCTTAACGTATAAA               CCCGC TTCG GCGGG                TTTTTTTGTATCTGT 100 53
CHC44_RS02815  527874 ..  527887 +  -3.8  -4.06533   TTTTTGCATCAAAAT               CAGC AAATTA GCTG                TTCTTTAATAATTTA  59 221
CHC44_RS02820  530356 ..  530371 +  -5.4  -3.36492   CATAAACGAGTGTCC              GTGCAGG CGG CC-GCAC              TTATGCCCTTCAGGC  56 385
CHC44_RS02830 NONE
        cysJ NONE
CHC44_RS02840  534400 ..  534411 +  -3.6  -2.99471   GGGAATAACCTGAAT                TGCC GGAT GGCG                 TCTGTGTAGGCCTGA  45 33
CHC44_RS02845  535244 ..  535260 +  -9.4  -4.32804   TGCTGCTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTGGTTAT  86 67
CHC44_RS02865 NONE
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e NONE
CHC44_RS02895 NONE
CHC44_RS02900  545297 ..  545309 +  -4.1  -4.21974   TAAGGAATTGTTATC                TTACC GTT GGTAG                TTTGTTAGGTAATAA  62 60
CHC44_RS02910 NONE
CHC44_RS02915 NONE
        cysC  551733 ..  551750 +  -9.8  -2.79831   GATCCTGAGACACCA             CCGGGC TTGTAT GCCCGG              TATGGTCAAGGTTAC  69 33
CHC44_RS02925  552184 ..  552210 + -13.8  -2.57344   CGGGTATACGTAACA         TCCGGCAAATGT GGT ACATTTGCCGGC         GTTGTCGCGGCAATC  86 110
CHC44_RS02930 NONE
CHC44_RS02935 NONE
CHC44_RS02940 NONE
CHC44_RS02945 NONE
CHC44_RS02950 NONE
         pcm  556308 ..  556331 +  -6.8  -3.21912   TGGGTTAAGCGTATC          GTGAACAC ATTTTCCC GTGTTCAC           TTAATGCGTTGCACG  59 116
CHC44_RS02960  557574 ..  557586 +  -3.3  -3.35996   CGTCAAGGGATCACG                GGTAG GAG CCACC                TTATGAGTCAGAATA  48 73
CHC44_RS02965  558588 ..  558631 + -14.8  -4.27117   CGCGAGTAAGTACCC TTGTCAAAAAAAGGCCAGTC GACA GACTGGCCTTTTTTTTACCG TTTGTCTTCTGCCAG 100 32
CHC44_RS02985  561469 ..  561482 +  -9.5   -3.2661   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTCGCTATTGTTTGG  72 26
CHC44_RS02995  563349 ..  563362 +  -2.3  -2.74999   CTCTGCCTGGCGTCA               CGCCT GAGG AGCCG                TCATGTTAAAAATTG  40 3
CHC44_RS03000 NONE
CHC44_RS03005 NONE
CHC44_RS03010 NONE
CHC44_RS03015 NONE
CHC44_RS03020  568811 ..  568831 +  -3.9  -4.04174   CAGCGAGCGCGCGCT            GTCGACAGA AAT TTTGCCGGC            TTTGCTTATCTCCAG  58 310
CHC44_RS03030 NONE
CHC44_RS03035  571188 ..  571227 + -17.2   -3.5394   AAAAGCCTGTGCCGG  CGCGT-GGGCCCGATAACG CGG CGCTATCGGGCCCGACACG  TTTACACCAGACTTT 100 40
CHC44_RS03045  574485 ..  574497 +  -2.6  -3.93769   CGGGTAACTACCTGC                GTCG GATTA CGGC                TTCGTTTTTTGGCCT  54 34
CHC44_RS03075  578177 ..  578192 +  -6.2  -3.63569   CCAGCTTTCGCTGAT              TCAGAA AACA TTCTGA               TTGTTAAAGGCTTAC  60 332
        invF NONE
        invG NONE
        invE NONE
        invA NONE
        spaK  586212 ..  586227 +  -3.2  -2.85078   TAGTCGGTCGCTAAT              GAGATG AAAA CACCTC               GTTTACTGCAATATC  44 19
CHC44_RS03120 NONE
        spaM NONE
        spaN  588932 ..  588946 +  -2.1  -3.12351   ATCTGGCGAGGAGGA               TGACG CCTGA TGTCA               TTGCGTGTGAGACAG  42 16
        spaO NONE
        spaP NONE
        spaQ  590797 ..  590816 +  -3.6  -2.76037   CTGGCGTTGGCTAAG            GGGTAAAA AATG TTTTACGC             GTTGTACTTTGAAAT  43 20
        spaR NONE
        spaS  592710 ..  592720 +  -2.4    -3.767   TGAATGTTCACTAAC                 CACC GTC GGGG                 TTTAATAACTGCATC  51 81
        sicA NONE
        sipB NONE
        sipC  596340 ..  596396 +  -7.9  -3.34806   GCTTAATCTGAAAGG TCATCTATACGCCATCATGGGTGTGAT TTA ATCGCGCTCCTGATGGCGAACTGGGGA TATTATGCTTAATAT  65 35
        sipD NONE
        sipA  599489 ..  599503 +  -2.1  -2.60075   TTACTACCGTTGATG              GCTTGC ACAT GCA-GC               GTTAATTAACCGGGA  39 6
        iacP NONE
CHC44_RS03190  600072 ..  600083 +    -3  -2.90075   AATTTGAAGAAGCAA                TCTT ATAA AAGA                 TATAATTCAAGAGGA  42 18
CHC44_RS03195 NONE
        sptP  602125 ..  602158 + -14.9  -4.18019   ACGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 34
        prgH NONE
        prgI NONE
        prgJ NONE
        prgK NONE
CHC44_RS03240 NONE
CHC44_RS03245 NONE
CHC44_RS03250  610843 ..  610856 +  -2.3  -3.17982   AAAGAGGCAATTGAC               TGGTG AACC CCCCA                TTGCTGGCGATTTGT  44 20
CHC44_RS03255  612068 ..  612080 +  -6.3  -2.96307   TTAGCTTTATGCGTA                CAATG AAC CATTG                ATTTGTGAAATTATT  55 12
CHC44_RS03265  613323 ..  613341 +    -6  -3.90048   AGGTGGTTGGTAGCC             TGGCTCAA TCA TTGAGGCA             TATTTTTGCAGGCAA  66 127
        avrA  614720 ..  614731 +  -2.2  -2.77043   GCAGTAGTGTGGTAT                TCAG CCCG CTGG                 CTTTCGCCTGGTGCG  39 456
CHC44_RS03295  618483 ..  618493 +  -2.4  -4.25104   TTAAGCCCCAGACGC                 TGCG CCG CGCC                 TTTTGGTCCAGCCAC  60 163
CHC44_RS03335  625087 ..  625117 +    -9  -3.65542   CGTTGCCCGCTTTGA       TTCTCGATATGGCG TTG CGCCATGTCATGAA       TGTTTTGGGGATGGG  75 49
CHC44_RS03340 NONE
CHC44_RS03345 NONE
        hycD  628548 ..  628566 +  -3.7  -2.90992   TGCGTTTTTAGCCTT             CGTCTCC TTGCT GGCGGCG             TGATTTAAGAGAGTT  46 4
        hycE NONE
CHC44_RS03360 NONE
CHC44_RS03365 NONE
CHC44_RS03370 NONE
CHC44_RS03375 NONE
CHC44_RS03380  633387 ..  633399 +  -7.7  -3.31144   CACTGGCGACATTAC                GTGTC ATC GACAC                TTGTGACGATGACAC  65 91
CHC44_RS03385  634115 ..  634126 +  -5.8  -3.34962   GCATTGCCGGATGGC                GGCA TCAA TGCC                 TTATCCGGTCTACGG  56 73
        hypF  636936 ..  636962 +   -10  -3.54424   CGCCGCGGTTGACGG         CTACTCCGGCGC GGC GCGCCAGAGCGG         TTTCCGGGCGTAAGC  71 508
CHC44_RS03405  640866 ..  640879 +  -2.3  -4.25104   GCAGGTTAATGGCGC               CGGTG AGTT TGCCG                TTTTCATCGACCACC  60 66
CHC44_RS03445  647225 ..  647250 +  -9.8  -3.89505   GCGCTAATTTACGCT         TAG-GGAGGGG AGCAC CCCCTCCGCTA         TTATTATGGCTTTTT  81 34
CHC44_RS03455  648193 ..  648212 +    -8  -2.84098   CTACAAAACACTTGA            TACTGTAT GAGC ATACAGTA             TAATTGCTTCAACAG  61 26
        recA  649405 ..  649424 + -11.4  -4.26189   TTAAATTACCATCAA            GGGCTGCA TTTA TGCGGCCC             TTTTGGCATTTCTCC  93 92
CHC44_RS03465 NONE
CHC44_RS03470 NONE
CHC44_RS03475  652839 ..  652860 + -17.3   -3.6502   ATAAGCGTTCGTTGG           CGCCGCAGC CCAT GCTGCGGCG            TTTACGTCAACGCTA 100 43
        csrA  653267 ..  653281 +  -4.2  -3.35679   TCTCACTTTTCGGGT               GAGACG CAG CCTCTC               TTCTCGCTCGCCCGC  50 51
CHC44_RS03490 NONE
CHC44_RS03495  653709 ..  653719 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
CHC44_RS03500  653847 ..  653857 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
CHC44_RS03505  654120 ..  654130 +  -5.4  -3.27029   CGAGTAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 151
CHC44_RS03510 NONE
CHC44_RS03515 NONE
CHC44_RS03520  655504 ..  655521 +  -3.5  -2.76171   ATTGTAGGTTTGGCA             TGT-ATGG CCG CCATTACA             GTTATGCTTATTAAA  43 43
        gshA  657220 ..  657236 +  -2.2  -4.85782   TACTCAGACTCGCCC              CGGAAC AAAGA GTTCAG              TTTATTTTTAAAAAA  66 126
CHC44_RS03530  657819 ..  657837 + -13.8   -5.5604   CAGTATTTAAATTAA             CCCCGGTC TAT GGCCGGGG             TTTTTTATTGCTTAA 100 60
CHC44_RS03535  659520 ..  659535 +    -9  -4.41206   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  85 45
CHC44_RS03610  674448 ..  674459 +  -7.2  -3.16564   CGATAAAAATCCCTA                CCGC TGCG GCGG                 TTCCTACGCTACACC  59 150
CHC44_RS03620  675247 ..  675274 +   -12   -3.2496   AAAAAAGCGACTAAA        AG-CGCGACTGGC AAT GCCAGTCGCGACG        TTAACTTATGCCTTA  83 27
CHC44_RS03630  676971 ..  676981 +    -4  -4.57073   GTGACATCTGCCGCT                 TTGA GGA TCAA                 TTTTTCGCCCGGCTC  69 167
CHC44_RS03650  678368 ..  678385 + -14.1  -3.31263   AATTACCGGCCACCG             GCGGCGC ATAA GCGCCGC              TTATCAGGATAACCT 100 39
CHC44_RS03655  678966 ..  678985 + -13.6  -2.62192   GAATAATGGGAATCG            GCGTCAGC AAAT GCTGACGC             ATTAATTCGCTGGCG  78 88
CHC44_RS03705 NONE
CHC44_RS03710  691736 ..  691757 +  -2.9   -4.2717   AGCACGTTTACAAAA           AGTCGCATC TTGA GGTGTGACG            TTTTAATCAAATGAT  58 65
CHC44_RS03715  692864 ..  692894 +  -9.8  -2.59876   TCTTTAAAAATAGCA       TTTCGGCAGTGGTG TCA TATCATTGCCGAAG       CATTTTATCTCCTGA  68 47
       pipB2  697382 ..  697393 +    -3  -2.88044   ACGGTAAAAATATCT                GAAT AACC ATTC                 CTATTTTCTCAAGTA  42 153
CHC44_RS03745  697774 ..  697810 + -17.5  -4.07687   TGATGGTTTTCAGTC    TGCAAAGCGCCTGATAA ATA TTACCAGGCGCTTTGTA    TTTTGGCGCCAACAT 100 38
CHC44_RS03750  700473 ..  700495 + -17.8  -3.29043   CTCGTTTTGATGGAT           TATGCCCGCC GCT GGCGGGCATA           TTCTGGCGGCGGGTT 100 31
CHC44_RS03785  710830 ..  710847 +  -9.8  -4.86621   ATTTCGTTTTATTCA             GCCCCG TGAATC CGGGGC              TTTTTCATTCAGCAT  91 44
        fljA  711662 ..  711675 +  -3.1  -3.42548   GCAGTTGCACTATTG               TCGTC TGGT GATGA                TTACTCTTCATTCAT  50 269
CHC44_RS03800 NONE
CHC44_RS03805  714900 ..  714912 +  -4.1  -4.12902   GTCAATTCTCTTGTC                TGCCT TAG AGGTA                TTTTCAGAATGATTA  59 1
CHC44_RS03810 NONE
CHC44_RS03815 NONE
CHC44_RS03820 NONE
CHC44_RS03845 NONE
CHC44_RS03850 NONE
CHC44_RS03855 NONE
CHC44_RS03860 NONE
CHC44_RS03865 NONE
CHC44_RS03870 NONE
CHC44_RS03875 NONE
CHC44_RS03880  727010 ..  727044 +  -6.6  -4.39277   AGTAAGATTATTATA     TACTGTAAATATAAAC AGT GGTTATGTATACAGTA     TTTCTTGTGGTGTTA  74 133
CHC44_RS03885  727512 ..  727541 +  -8.5  -2.90496   GCATTAAGAAACGTT       GCCCCCAAGAGGA TTCA TTCTGATGGGGGC        TAGTTTGGGCAACGA  65 278
CHC44_RS03915  730512 ..  730534 +   -12  -2.66316   AATCCCCATCATCTG           TGGCGGCACG CGG TGTGCTGCCA           TCATGTCATCGCGGC  72 244
CHC44_RS03930 NONE
CHC44_RS03935 NONE
CHC44_RS03940  735933 ..  735953 +  -2.5  -3.08812   TCCACCGCCCACTTA            TTCAGGAGA AAG TCGCATGAA            GTTTGTTGCGCCCGA  43 103
CHC44_RS03945 NONE
CHC44_RS03950  736599 ..  736613 +  -2.8  -2.59927   ACCACGGCGCAGACC               GTCC AGCTATG GGAC               TGAATTATGACGCTT  40 8
CHC44_RS03955 NONE
CHC44_RS03960 NONE
CHC44_RS03965 NONE
CHC44_RS03970 NONE
CHC44_RS03975 NONE
CHC44_RS03980 NONE
CHC44_RS03985 NONE
CHC44_RS03990 NONE
CHC44_RS03995 NONE
CHC44_RS04000 NONE
CHC44_RS04005 NONE
CHC44_RS04010 NONE
CHC44_RS04015 NONE
CHC44_RS04020 NONE
CHC44_RS04025  746095 ..  746132 +  -2.1   -5.1244   CCACAATTATATTAC   TTTTGTCGTAGGCA-ACT TTT AGCGTGTCTACTGCAAAA   TTTTTCTGTTCCTCA  74 403
CHC44_RS04040 NONE
CHC44_RS04045 NONE
CHC44_RS04050  749524 ..  749549 +  -8.9  -3.90291   GCCTCTGATTAACCT         TAACGGCGCGG GCAG CCGCGCCAGTA          TTTCATTAACAGGAT  79 33
CHC44_RS04055  749886 ..  749906 +  -7.5  -3.42395   TGACGATTGATGATC            TTGTGGCGG ACA TCGCCACCA            TCTTTCACTGGTCGC  65 38
CHC44_RS04060 NONE
CHC44_RS04065 NONE
CHC44_RS04070 NONE
CHC44_RS04075  754394 ..  754410 +  -2.3  -3.06171   TCGAATAATTGGTTC              TCAATAT TGA ATAGTGA              TGTATCATTATTGCG  42 33
CHC44_RS04080  754680 ..  754696 +  -7.2   -5.4505   AGTTTCTGAACAGAA              CCCGCT TTAAT GGCGGG              TTTTTTGTTGCCGCC  95 32
CHC44_RS04115  773226 ..  773245 +  -5.8  -3.51825   GTTCGCGCCAAAGAG            GTTTA-CCG TGC CGGATAAAC            TTGTGGTTGAAGTGG  57 8
CHC44_RS04120  773511 ..  773529 +  -3.1  -3.64716   GCGCGCCGAAAAATC             GGCTGGT AGATA ATTAGCC             TCTTTTGCCGGATAA  51 13
CHC44_RS04140 NONE
CHC44_RS04145  777523 ..  777543 +    -9  -5.53288   GAAGTAAAAGTTTGA            TGGCCGAT GTAAA GTCGGCCA            TTTTTTTAGCTTAAA 100 34
CHC44_RS04170  782159 ..  782186 + -13.4  -4.43307   GCTTTTAATATGACG        CCGGGCTCCGTT CCTC GATGGGGCCCGG         TTGTTTTATTCACAC 100 285
CHC44_RS04175 NONE
        rimM  783010 ..  783020 +  -2.4  -3.33744   TACTATCGAAGTAGA                 CTGG GAT CCTG                 GTTTTTAAACCACCG  45 7
        trmD NONE
        rplS  784269 ..  784291 + -10.5  -5.33866   GCTTGTAGAAAAGAA           GGGGCTGGC ATTAC GCTGGCCCC           TTTTTTATGGGTTTG 100 66
CHC44_RS04205  787622 ..  787638 +  -2.3  -2.52933   TGGCGGTGCGCGTCG              CATAAGA GGT TGTTATG              GTTGCTGAATTGACC  39 21
        tyrA  788778 ..  788792 + -11.4  -5.37593   ACATCTATACTAAAA               GCCAGC TTT GCTGGC               TTTTTTCGTTTAAGG 100 46
CHC44_RS04215  790098 ..  790124 +  -4.3  -4.67353   GCTGCCGAGCGCCGC         GACGCGCGG AGAGTTTGC CTGCGCGAC         TTTTTCCATCGCTGC  71 400
CHC44_RS04235 NONE
CHC44_RS04240  794355 ..  794369 +  -5.7  -3.83998   TTCACCTTGAATAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  61 98
CHC44_RS04245  797005 ..  797022 + -10.5  -5.27335   CAAATTTGAATAAAA             CGGGCCC TGAC GGGCTCG              TTTTTGTTTAAAAAC 100 45
CHC44_RS04250  799003 ..  799016 +  -2.3  -2.72471   AAGAACTGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 36
CHC44_RS04255  799179 ..  799214 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
CHC44_RS04260  802285 ..  802297 +  -3.3  -3.05816   AGAGACGATTTTCAG                CACTG ATT CAGAG                TTGAGTACGCAATAA  45 56
         rrf  802566 ..  802597 + -17.4  -4.32049   AGGCATCAAATAAAA      CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG       TTTTCGTCGGTTGTC 100 37
CHC44_RS04270 NONE
CHC44_RS04275  804764 ..  804790 +  -6.6  -3.19463   TCAAAGAAAACATCA        GCCCT-ATCGC TGCGCT GCGGTCAGGGC         TTACTCCCTGGTGAC  56 165
CHC44_RS04310  811654 ..  811667 +  -9.5  -2.57344   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATGCGGGCGATA  68 93
CHC44_RS04320  813114 ..  813138 + -16.5  -5.34857   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 46
CHC44_RS04330  814734 ..  814755 + -14.5  -3.44206   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 15
CHC44_RS04340  817033 ..  817045 +  -3.3  -3.36991   ATCCAGCGTAAAGTG                CAGCC CCC GGCTC                TCTTTACGCATCATC  47 94
CHC44_RS04350 NONE
        rpoE NONE
CHC44_RS04360 NONE
CHC44_RS04365 NONE
CHC44_RS04370 NONE
CHC44_RS04375 NONE
CHC44_RS04380  823752 ..  823764 +  -3.4  -3.64609   TCCCTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATTCTG  51 41
CHC44_RS04385  824745 ..  824777 + -17.2    -4.015   GTGACGAAATGATCG     TTCACGCTGCCGTCT TTTT AG-CGGCAGCGTGAA      TTATTTCCTGGATAA 100 43
CHC44_RS04395 NONE
         era NONE
CHC44_RS04405 NONE
CHC44_RS04410 NONE
        acpS  828875 ..  828900 +  -3.3  -4.39329   ACGCCTATTTTCTGC         TCGG-GCCAG CTCTTTT CTGGCGCTGA         TTTGTTATCTACAGT  62 454
CHC44_RS04430 NONE
CHC44_RS04435  832040 ..  832068 + -15.4   -4.0896   GCGCAATAAACTTGA        TGGCTCTTCTGC ATGAG GCGGAAGAGCCA        TTTTCAAACCAGTTT 100 32
        murQ NONE
CHC44_RS04450 NONE
CHC44_RS04455  835944 ..  835956 +  -3.3  -3.02471   CAGCTCGAATAGTGA                AACGC ATA GCGTC                TGTGTATAATGCCGC  45 29
CHC44_RS04460  836838 ..  836848 +  -3.2  -4.74103   CCGTAGGTTAGCTTA                 CTGT AAT ACGG                 TTTTTGGCTTAACAG  70 347
CHC44_RS04475  842274 ..  842292 + -11.7  -5.24129   CCCGATAGCCATTAA             GCCCCTC TTCAC GAGGGGC             TTTTTTGTAGACGGC 100 45
        qseE NONE
CHC44_RS04485 NONE
CHC44_RS04490 NONE
CHC44_RS04495  847349 ..  847360 +  -5.8  -3.36991   CAGACGCGCAGCACC                GAGC GGGC GCTC                 TCTTTCGGGCTGCTC  56 525
CHC44_RS04525  856898 ..  856936 + -12.5  -3.69621   ACTTATGCGCCATAA  CG-TGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCCG   TTTGAACTTCTCCCT  95 90
CHC44_RS04530  858291 ..  858303 +  -4.7  -4.57073   TCAGCGCTACGCCGC                GCGGG CAT CCCTC                TTTTTGAAACGCCTG  71 148
CHC44_RS04540 NONE
CHC44_RS04545  861446 ..  861458 +  -9.1  -4.77438   GAGGAAGAGCTTGCC                GACGC GCG GCGTC                TTTTTACTGGTGCGT  93 290
CHC44_RS04575  866969 ..  866982 +  -3.9  -2.71681   TAAATACCTGACTAA               TTTAC TCAA GTAAA                TAGTTGACCAAATTA  45 65
CHC44_RS04580  867729 ..  867752 +  -2.4  -2.72144   AGCCGGTTGCCTGAT          TCCTTGCATT GAGT GATGTACGGA           GTTTAAGAGCAATGA  40 171
CHC44_RS04585 NONE
CHC44_RS04590 NONE
CHC44_RS04595  869882 ..  869908 +  -8.7  -4.30719   AGTAAGAAGGTATAA        CCCCAC-CGTGG TCGC CTGCGTGTGGGG         TTTGTTCTGACAGGC  84 163
        hscB NONE
        hscA NONE
         fdx NONE
CHC44_RS04615 NONE
CHC44_RS04620  873070 ..  873091 + -15.1  -3.78775   TAGCAAAAGATCTAA           CGGGCTGCC CTAC GGCGGCCCG            TTTGCTAATAAGGAA 100 38
CHC44_RS04625  874413 ..  874438 + -11.1  -3.12395   ACGGTGTTTTTGTAG         GCCGGGTAAGCG AAG CGCC-ACCCGGC         ATTTTGCCTGATGGC  76 41
CHC44_RS04630  875736 ..  875751 + -10.4    -5.626   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 478
CHC44_RS04645  876991 ..  877006 +    -9  -2.71712   CGCCCTCATACACCA              GTTCCG TCCA CGGAAC               GTTTAGCGCGCCAGG  60 229
CHC44_RS04655 NONE
CHC44_RS04660  885110 ..  885126 +  -3.1  -4.59853   TCATTTAATTTAAAG              TTAATGA GAA TTATTAA              TTTTTCCGAAATTAC  66 67
CHC44_RS04665 NONE
        dmsB NONE
CHC44_RS04675 NONE
CHC44_RS04680  889918 ..  889928 +  -2.6  -3.09878   CTAATGCTCATTTTA                 TTTT AAA AAAA                 TGTTACCTGCATCCA  43 50
CHC44_RS04685  890562 ..  890594 +  -4.1  -5.04249   ATTTGTACAATGCAG     CGCCCCCGGACGAGC AGTAA GCTTA-CC-GGGGCG     TTTCTTTTTTCAACC  76 142
CHC44_RS04690  891822 ..  891861 + -12.3  -2.55722   AAGGCTATTTGATAG  CAGTTGCGCCACGGTGCA TTCAT TATACCGTGGCGCAA-TG  TCAGTTGAATAATGT  81 29
CHC44_RS04695  891991 ..  892001 +  -6.8  -3.50045   GTTTTGTCATCTGCG                 GCCT GAC AGGC                 TTATACTGTCTGACT  62 43
CHC44_RS04700 NONE
CHC44_RS04705  894268 ..  894288 + -13.3  -3.00298   AAAATAAGAACGTGA            TGGGAAGCG GCG CGCTTCCCG            TGTATGATTGAACCC  86 34
CHC44_RS04710 NONE
CHC44_RS04715 NONE
CHC44_RS04720  897494 ..  897514 + -11.1  -4.60746   GTGTGTTTTAAAAAA            CGGCTCCTG GTG TAGGGGCCG            TTTTCCTGTTTTTAA  95 52
         der  899080 ..  899107 + -10.6  -3.60296   TTCAGTAATATTCCA        GGCCTGACAAGCG CTG CGCTA-TCAGGCC        TTTCAAGTAAAAGTG  83 47
CHC44_RS04730  899469 ..  899479 +  -4.6  -4.59946   TATCAGCATAGTATC                 CTGC CCG GCGG                 TTATTTTATTCTTTT  71 126
        sinH  901909 ..  901939 +  -6.9  -3.04398   TAGTCAGAAATAGCG      TCAGCGTTATGGCT GACC AGCCA-GCCGCTGA       ATTTTGAAGAAAAGG  58 28
CHC44_RS04740  902971 ..  902994 + -16.8  -4.20106   GTAAGTTTACCGGCA          CGCCATTCCC TGCG GGGAATGGCG           TTTTCCGTACGCTTT 100 37
CHC44_RS04750 NONE
CHC44_RS04755  922925 ..  922947 + -14.1  -4.08216   GTAAGTTAGACAAAA           CCGGGCGGG TGTTC CCTGCCCGG           TTTTGAGGCGAATGA 100 37
CHC44_RS04765  926058 ..  926081 + -13.9  -4.56113   GGCTCCTGATTTTCT          TCGCCCGAC CTTCGC GTCGGGCGA           TTTATTTAATCTGTT 100 32
CHC44_RS04770  927747 ..  927766 +   -10  -5.42975   TAAAAGTGAATTTAA            CCCTCTGT TTTT GCAGAGGG             TTTTTATTTATGTGC 100 74
CHC44_RS04800  929755 ..  929766 +  -4.4  -2.90797   TTTAATAATTACAAT                CGAT GACT ATCG                 TGTGATGTATATCGC  48 20
CHC44_RS04805  932078 ..  932092 + -12.8  -2.79312   TTCAGTAAAGACAGA               CGCCGC GGC GCGGCG               TCTGATCCACAATTT  82 33
CHC44_RS04835  938641 ..  938659 +   -11  -5.81412   AATAAATAATTAAAA             GCCGACTT TAA GAGTCGGC             TTTTTTTTGAATAAA 100 44
CHC44_RS04840  940007 ..  940027 + -18.3  -3.58726   ATCAGTAACGGGTTG            CCGGGCAGC GAT GCTGCCCGG            TTCTATCTCACGGGA 100 33
CHC44_RS04845  940911 ..  940939 +  -8.1  -3.09327   GCTCCATCAGTTTAG        GGTGTTCAACCAG CGC CTGGATTAACGCC        TCTTCACTCAGCTGG  60 141
CHC44_RS04860  944068 ..  944087 +  -9.3  -5.18726   CGCTCTTTTTTTTAA            TGCCGCA CCGTGT TGCGGCA             TTTTTATTGTCGGAA 100 134
CHC44_RS04865  945459 ..  945487 +  -9.6  -2.89881   GCGGGTTTTTCCATA       CTGCGCGCTCCAT GTTA AAGGAG-GCGCAG        TATATGACGTCGATA  70 61
CHC44_RS04870 NONE
CHC44_RS04875  947919 ..  947947 +  -8.8  -3.10843   ACGGCGCATTCCCTT       TC-CAGGCCGCAC ATCA GCGCGGCCTGAGG        CTTTTACGCGTTTTC  66 40
CHC44_RS04890 NONE
CHC44_RS04895  951076 ..  951095 + -11.4  -5.31275   ACAAGTAATTTAACA            GGGCTGGA GTAA TCCGGCCC             TTTTTTCTGATAAGA 100 33
CHC44_RS04900  951969 ..  951990 + -13.7  -2.90054   TAATTCCGCTTCTGA           CCGGAGGGC AACC GCTCTCCGG            TATCATCCTTTCCTC  87 38
CHC44_RS04905  952959 ..  952970 +  -2.2  -2.64735   CTTTTGATAAACCGG                GGCA GGGA TGTC                 TGATATCGATGCGCT  39 34
        tmcA  954973 ..  955002 +  -8.6   -3.3858   CCCGGCGGTGGGAAC       CATACCGGATAG CGATAC CTGTCCGGCATG        TTATCCAGTTACTTT  69 14
CHC44_RS24055  957239 ..  957259 +  -8.3  -5.24129   TAGGGGATAAGAAAA            GGCGACT CAACGAA AGTCGCC            TTTTTTGTGCCCGAC  95 51
CHC44_RS04940  964585 ..  964597 +  -9.1  -3.56821   CGATAAACATTTTCC                CGTCG GGT CGACG                TTTAACAGGTCTGAT  73 165
CHC44_RS04950  966979 ..  966990 +    -3  -3.53012   TGGACTGAAAAAAAA                GAAA TATA TTTC                 TTTACACAAAAAAGA  48 33
CHC44_RS04955  968120 ..  968135 +  -5.4  -3.11955   CGGATGCCTGGCCTA              CGCTGTG GAT CAC-GCG              TTGAATCCTGGTTGT  52 6
CHC44_RS04960  968498 ..  968538 +   -12  -3.12449   GAGTCTACGAAGTAA  TTTTGCACAGCCTACAGA ACAGG TCTGCAGACTGTGCAAAG  TCTGTGTTGCTAACG  81 26
CHC44_RS04980  974104 ..  974121 + -12.7  -5.60993   TTACTCTCTCTTCTG             GCGCAGG TTCT CCTGCGC              TTTTTTTATGCGCCG 100 48
CHC44_RS04985  974819 ..  974833 +  -2.9  -3.15861   TTTACCCTGTGTGAG               TTAAC AAAAA GTTAA               TTGGTGGCGGTAATG  45 11
CHC44_RS04990 NONE
CHC44_RS04995 NONE
CHC44_RS05000 NONE
         pta  977807 ..  977824 +  -2.6  -2.83403   CACTGGTTGAATGAA             CGGTCC CGTTCT GGACCC              CTTTAATGAGAGGAA  41 27
CHC44_RS05010 NONE
CHC44_RS05015 NONE
CHC44_RS05020  979933 ..  979943 +  -6.8  -3.48924   ATGCGTGCTGGTGGA                 TGCG TTT CGCA                 TTGTATAAGGGATGA  62 7
CHC44_RS05025 NONE
CHC44_RS05030  982045 ..  982056 +  -5.8  -3.30124   GTTAATGCCGGAGGC                GACG TAAA CGTC                 TTATCCGGCCTACAA  56 92
CHC44_RS05035 NONE
CHC44_RS05040  984715 ..  984732 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  44 16
CHC44_RS05045 NONE
CHC44_RS05050 NONE
CHC44_RS05055 NONE
CHC44_RS05060 NONE
CHC44_RS05065  989295 ..  989309 +  -4.2  -2.52834   TGGGCTTGATATTGA               TGGGGA GGC TCTCCG               GTTGCTGATAACGTG  44 32
CHC44_RS05090 NONE
CHC44_RS05095 NONE
CHC44_RS05100  994782 ..  994799 + -11.3  -3.68359   AATAGCCTCCATTAA             TGCCACG ACTG CGTGGCA              TTCTCATTTTCAGGA  87 81
CHC44_RS05105  995833 ..  995850 + -12.7  -5.48825   GCATGAAAATGCCCA             TCCCCGC CTCC GCGGGGA              TTTTTTTACCTAATA 100 138
CHC44_RS05110  996770 ..  996797 + -14.2  -3.84992   TCTGATTGATGCCGG        TCTCCTCCCCGCG CCG CGTGGGGAGG-GA        TTCTCTTATTCCCTT 100 36
CHC44_RS05115 NONE
CHC44_RS05120 NONE
        cysW NONE
CHC44_RS05130 1000751 .. 1000776 + -13.3  -5.02074   ATTTGTATAGTTATC         GCCCGGTG-GCG CTA CGCATACCGGGC         TTTTTTACGAGCTGA 100 48
        cysM 1001683 .. 1001702 +    -2  -3.60098   GTTTGGTGAAGAGCA            TTTCAGCC AGGG GGCAGGGA             TTTAAACTAACAGGT  49 1
CHC44_RS05140 1001957 .. 1001970 +  -2.3  -2.92463   TCAGTTGTACTTGTT               GCTGG CAGG CCATC                TCTGTCACTGGTACG  41 50
        pdxK NONE
CHC44_RS05170 1006153 .. 1006170 + -12.7  -3.67597   TACAGGCAAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA  95 138
CHC44_RS05200 1012303 .. 1012319 + -10.8  -5.38249   ACATTTTTAACGTAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 57
        ligA NONE
CHC44_RS05210 1014730 .. 1014759 +  -4.1  -5.40072   ACGTCGGAAACAGAA       TATTGGCCATCGG AATC CCGTTGGCCAGGC        TTTTTTTCGAACCGC  86 177
CHC44_RS05220 1016621 .. 1016646 +  -9.7  -3.06815   GTGTGAGGTGCGGTC         TTGCCCTGCCA TTTT TGACAGGGCAG          TGTGTTAAAACAGGT  71 57
CHC44_RS05230 1018516 .. 1018530 +  -9.2  -4.03234   AACACAATGACTACG               GCCCCG TAT TGGGGC               TTTATCTCACGGCAA  80 40
CHC44_RS05235 1019819 .. 1019848 +  -8.6  -4.82901   GCACATTAATTTTAT       TTGACTGGCGAG AGGATG TTCGCCAGTCCA        TTTTTATGAACAAGG  89 32
CHC44_RS05240 1020023 .. 1020033 +    -4  -2.82933   CGTTAAATCTATTTT                 TTAC TAG GTAA                 TATGGTAAATTCCAG  45 19
CHC44_RS05245 1021082 .. 1021096 +  -9.2  -5.17576   GCAGATAGCAAAAAA               GCGCCT TTA GGGCGC               TTTTTTACATTGGTG  93 142
CHC44_RS05270 1023189 .. 1023223 + -17.4   -4.2461   ACGCCCGCTGAAACA     GAATAAACGGCAGG GCAGACG CCTGCCGTTTATTC     TTTGTTAGTCCGCCT 100 40
CHC44_RS05285 NONE
CHC44_RS05290 NONE
CHC44_RS05295 1024409 .. 1024428 + -11.4   -5.2197   CCACCAATATTCGAA            CCCTCGCT GAAA AGCGGGGG             TTTTTGCTTTTTGTC 100 35
CHC44_RS05300 1026794 .. 1026811 + -12.7  -3.97368   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTGCATTAAACC 100 40
CHC44_RS05310 1029636 .. 1029660 + -12.2  -3.38812   ACAGAAAGATAGCAG         GCCCGATG-CG TGGG CGTCATCGGGC          TGTTATTCAGCAGGA  85 43
CHC44_RS05325 1033252 .. 1033280 +  -9.6  -3.53444   CCGCCGCGAAAGCCG       CTCGCCGCCGC GATGACCA GCG-CGGCGAG        TTTGACGACGGCTAA  71 328
CHC44_RS05335 1035482 .. 1035498 + -13.7  -5.29385   CTTGTCAGTCTCAAA              CCGCGTG CCT CACGCGG              TTTTTTCATTGCCTT 100 134
CHC44_RS05340 1037341 .. 1037360 + -13.6  -5.33026   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 35
CHC44_RS05355 1039769 .. 1039787 +   -16  -3.65812   GTCAGCGAATAGATA             GCGCCGAC AAT GTCGGCGC             TTCTGTTCCCCGGGA 100 255
        pgtC NONE
        pgtB NONE
        pgtA 1046105 .. 1046118 +  -2.4  -2.71364   CAATCTGGCTGACAA               CATC AGCAAC GATG                TCGTTAGCCAGATAA  40 56
CHC44_RS05390 1047291 .. 1047322 +  -8.7  -4.72986   TCTAGACCACATCGG      GATGTCATCGGTC ATAACC GGCCGATGACGAC       TTTTTGCTGAACGTA  89 36
CHC44_RS05405 1049590 .. 1049608 +   -11  -4.78764   GGCAGTAAATAAAAA             GGTGAGCG CAA TGCTCACC             TTTTTGATCCGTTTC  95 43
CHC44_RS05415 1051606 .. 1051642 +  -9.4  -5.75599   GTTAATCCGTTCATT    CACGACGCCTCCGTCA TCATC TGGCGGAGGCGTTTTC    TTTTTTTGTCGTTTC 100 36
        fadI NONE
        fadJ 1055356 .. 1055369 +  -3.1  -4.56597   ATGGATAAGGCACAA               TGCCGG CCA CCG-CA               TTTTTGCCGCAGCCA  64 151
        sixA 1056077 .. 1056090 +  -9.5  -2.84325   TCAACACCAGCAGCG               CGGCG TCGC CGCCG                TACTCTTTCGGCGCC  64 178
CHC44_RS05440 NONE
CHC44_RS05445 NONE
CHC44_RS05450 NONE
CHC44_RS05455 NONE
CHC44_RS05460 NONE
CHC44_RS05465 1061298 .. 1061323 + -14.7  -3.63569   AATAACGCCGTGGGC         CGGAAGGCGAC GCTT GCCGCCTTCCG          TTATTGACCCATTAC 100 36
CHC44_RS05475 1064744 .. 1064763 + -13.6  -5.26875   GTATCAATAATGAAA            CAGGTCGC TAAT GCGACCTG             TTTTTTCATTCAGGG 100 60
CHC44_RS05480 1065574 .. 1065610 +  -4.4  -3.15249   TTGCTGACCAGGCCT   CAGCCTGGGTGATGGCG CCTG CGTCATAAATC-GGCTG    TTCATAACCCCTGTC  47 136
CHC44_RS05500 1067508 .. 1067544 +  -8.6  -2.60212   AATCCTGACGTTCAG    GTAGAGGGGGGCGTGG CCTTT CCCCGCCTTACTCTGC    ATTCTGGAGTAATGC  63 153
CHC44_RS05505 1068970 .. 1068984 +  -6.4  -3.47361   GGCTGAATTTGATAA               GTGTGC TGG GCATAC               TCTTTGATCGCTGTG  57 257
CHC44_RS05515 1070989 .. 1071018 + -11.5  -3.80279   TAATGTCTTCTTAAT       GC-TCCCTGTCGAA TAA TGCGACAGGGACGC       TTATGTATTTCTGGA  91 38
CHC44_RS05520 1072037 .. 1072054 +  -4.1  -2.62184   ATTGCGGAGAAGCTG             GTGCAGG AGTA TCTGTAC              TGATGTCCGGACAGC  44 5
CHC44_RS05525 NONE
CHC44_RS05530 1073589 .. 1073601 +  -3.3  -5.24531   ATAGAAAGTAACTCA                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  77 37
CHC44_RS05535 1074647 .. 1074679 + -17.1  -3.06515   TGAGGCCTGATAACT      GAAAAGGGCAGGGCC GCA GGCTCTGCCCTTTTG      CTTTTCACCGTAAAG 100 31
CHC44_RS05540 NONE
CHC44_RS05545 1076824 .. 1076849 +  -9.8  -5.27938   AGATAAAAAGTGTGA         TGGCGTTGAA TATTTT TTCAGCGCCA          TTTTTATTTACGCGT 100 208
CHC44_RS05550 NONE
CHC44_RS05555 1079003 .. 1079025 +   -17  -2.66733   AAGGCTAATGGCTTT           GCCAGCGGCG CGA TGCCGCTGGC           TGATGTCAATTACGC 100 33
CHC44_RS05565 NONE
CHC44_RS05570 NONE
CHC44_RS05575 1084690 .. 1084714 + -14.9  -2.62613   ACGCGTTAACGCATA          ACCGCCGCGGC TAT GTCGCGGCGGC          ATCTTTGACCTCACG  89 32
CHC44_RS05580 NONE
CHC44_RS05585 NONE
CHC44_RS05590 NONE
CHC44_RS05595 1087858 .. 1087881 + -10.4   -4.7497   CTGGGGAACTATCAC          GGTGCAAAAT AGAT GTTTTGCACC           TTTTTGGTGCATAAG  91 63
CHC44_RS05600 1088948 .. 1088959 +  -7.2  -2.62184   CGGGCAAGGCACAGC                CGCC ATCC GGCG                 TGATGTGAGGCAAAA  57 133
CHC44_RS05605 NONE
CHC44_RS05610 NONE
CHC44_RS05615 1091310 .. 1091322 +  -9.1  -4.07568   GAAATGCGAATCCGG                CGGCT TCA AGCCG                TTTTGGCAGCGCCCG  80 136
CHC44_RS05630 1093770 .. 1093784 +  -6.4  -3.35358   GAGCGATGAAACTGA               TGTTCG CAT CGGACA               TTCATGGTTCTTTAC  59 91
CHC44_RS05640 1094952 .. 1094981 +    -8  -3.74224   TCCCGCATACATAAA      CTGGAGGCGAT-GG ATTT CCGATCGC-TCCAG       TTTCCCTGATTTAAC  71 56
CHC44_RS05655 NONE
CHC44_RS05660 NONE
CHC44_RS05665 NONE
CHC44_RS05670 NONE
CHC44_RS05675 1100193 .. 1100221 + -11.8  -4.20084   TAATCATGGAGATAT       TGCCGGATG-GCG CTGA TGCTCATCCGGCA        TTTTGGATCAATGAT  95 38
        yfbV 1106211 .. 1106230 + -10.8  -5.52384   ATTACGCATATAAAA            GAAGGCAT ACCA ATGCCTTC             TTTTTTTCATCGCCA 100 51
CHC44_RS05700 NONE
CHC44_RS05705 1107443 .. 1107460 + -14.1  -2.70946   CCTGATCATGATATC             GCCCCGC TTTG GCGGGGC              ATATTTATGGCAGAA  87 36
CHC44_RS05710 1109710 .. 1109731 +  -4.3  -5.10497   TCATCCGGCGCCATA           TCAACCAGC TTTT GCTGGGCGA            TTTTTTCGATCGCTT  80 400
CHC44_RS05725 1111677 .. 1111688 +  -7.2  -2.63479   AGAAGGTTAGACCTT                CCCG GCGG CGGG                 TGGTGTGAAACTATT  57 101
CHC44_RS05730 1113243 .. 1113276 +  -9.6  -5.61596   CGTAAATGTAAAAAA     GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC     TTTTTTTGTGCCCAT 100 64
CHC44_RS05735 1113726 .. 1113744 +  -2.4  -6.13503   GCTGTTTTTATCATT             TTCTACAG TAA TTGTAGGG             TTTTTTTTATTCCTC 100 315
        nuoA NONE
CHC44_RS05745 NONE
CHC44_RS05750 NONE
CHC44_RS05755 NONE
CHC44_RS05760 NONE
CHC44_RS05765 NONE
CHC44_RS05770 NONE
CHC44_RS05775 NONE
CHC44_RS05780 NONE
CHC44_RS05785 1123821 .. 1123836 +  -2.5  -3.18199   TTCAGTAAGTGAGAT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  45 16
CHC44_RS05790 1125742 .. 1125760 +    -3  -2.80966   AAAGGAATAAAAATC             GCCATGTT ACT ACCCTGGC             TAATATTGATTCCCT  41 99
CHC44_RS05795 NONE
CHC44_RS05800 1128814 .. 1128830 +  -9.5  -3.29829   CCTGAGCCTCTAAAT              GTTGGAT TGC ATCCAAC              TTATGAAAACCTGTG  74 101
CHC44_RS05805 1131421 .. 1131451 + -18.4  -3.05715   TGTCTCACTAAGCGT       CAGGGGATGCCTGT ACT GTAGGCATCCCCTG       TTACGTCAGGCGCTT 100 30
CHC44_RS05820 NONE
CHC44_RS05825 1134386 .. 1134402 +  -6.5  -4.56597   TTTTTTAGGGCAGTA              CCCCGTA TAA TGTGGGG              TTTTTAACAGGGAGG  76 88
CHC44_RS05830 NONE
CHC44_RS05835 1137453 .. 1137468 +  -4.7  -3.00923   CGCTGCAGCAACTTT              TGGCT CAGGTA AGCCA               TCTGTGATGTTGCAC  49 3
CHC44_RS05840 1138206 .. 1138216 +  -5.4  -3.41125   TGGCGTGGTAGACAG                 TCTG GCT CAGA                 TTCTGCGTCTCTGAC  56 1
CHC44_RS05845 NONE
CHC44_RS05850 NONE
CHC44_RS05855 1141478 .. 1141492 +  -2.1  -3.21924   GCCGTTTTGTTTATC               CGTTG ATGTG TAACG               TGTTATGAACAATCA  44 75
CHC44_RS05860 1141901 .. 1141951 +  -3.4  -2.98387   GGCTACCCAGACAAG CACATAGCT-GAGACTCAGCAGCGC ATAG GCTTTGCTGAG-CGCGAGC-GTGTG TAATGTTTTATGCCA  42 143
CHC44_RS05900 1150282 .. 1150302 +  -8.9  -2.64616   TTTTAACGCGGATAT            CGTCGCGGA AGG TCCACGGCG            TAATATCGCTCAGAA  59 273
CHC44_RS05910 1151302 .. 1151319 +  -9.1  -4.30576   GCTGACGGCCCTTAT             GTTGGCG TAAA CGCCAGC              TTTTGATGCTAACGG  85 2
CHC44_RS05915 1152672 .. 1152706 +    -5  -2.92398   TGGGAACGACATCGT    GAGCCGGATAA-GGC CGCTAT GCCATTATCCGGCAA     TATCATCTGCTTTTT  50 61
CHC44_RS05920 NONE
CHC44_RS05925 1154924 .. 1154935 +  -4.4   -3.1978   ACGGCAACGCCCTCA                TCCT GTTG AGGA                 TATTGCTATGAGCAT  50 62
CHC44_RS05930 1156215 .. 1156225 +  -2.4  -2.86582   CCGGTGGCGCAATCC                 GGCG CTG CGCA                 TCATTAATCTTATCT  41 8
CHC44_RS05935 NONE
CHC44_RS05940 1157253 .. 1157273 + -15.5   -2.9248   GCATAGAACTTTTAG            TGGGAAGGC TTG GCCTTCCCA            TCCTTATATACTTAT  93 35
        glpT NONE
CHC44_RS05975 1165586 .. 1165638 +    -9  -3.54543   AAGGTTTGCCATAGT CGAAGTGACGCGCCGGATGAGG GCATAAACG CCTCATCCGGCCTGGCGCAACG TTTGCCAGAGTAAGT  73 40
CHC44_RS05985 1167943 .. 1167968 + -16.3  -2.87931   GATTTCGATATCGCC         TTTTGCCCTGC AGCA GCAGGGCAAAA          TCTCTCCCGGCTGGA 100 51
CHC44_RS06015 NONE
CHC44_RS06020 1176531 .. 1176552 +  -2.3  -3.14132   GACGGGTATACACGG           GAGGTATTGA TTT TCTA-ACCTC           TTCCTGGCCAGGCCC  42 212
CHC44_RS06030 1179407 .. 1179424 + -14.1  -5.29846   GTTATTGCTGTGCGA             GGGCCGG ATAT CCGGCCC              TTTTTCTTTGCCGTT 100 42
CHC44_RS06035 1182648 .. 1182686 +  -7.5   -4.4009   ATACTTCGCTCTCTT  TTGGCGACAGGCGCTTAT CGCC GTAACCGCCTG-CGCTGA   TTTTCTCCAGTAGAC  79 319
CHC44_RS06055 1187680 .. 1187693 +  -9.5  -5.18357   AAAGATGTTGCTAAA               GGGCC TGCG GGCCC                TTTTTTCATGCCTTA 100 47
CHC44_RS06060 NONE
CHC44_RS06065 NONE
CHC44_RS06070 NONE
CHC44_RS06075 1192603 .. 1192615 +  -5.5  -3.28924   GGTATACACCACGAT                CGGCA GCT TGCTG                TTGTAGCGCAGCATC  52 289
        napF NONE
CHC44_RS06090 NONE
CHC44_RS06095 NONE
CHC44_RS06100 NONE
CHC44_RS06105 NONE
        napB NONE
CHC44_RS06115 NONE
CHC44_RS06120 1200000 .. 1200019 +  -6.3  -2.86177   CCGCCGCCTGGTGCT            GACCGGC GGGGGG GCCGGGC             TGTGATGTGGCGTGT  55 1
        ccmB 1200673 .. 1200699 +  -2.9  -4.39386   CGCTGCGCCTCAGCG        TG-CAGTAGCGC CCCG GCGCGACGGACA         TTTTACTGGTTTCAG  60 18
CHC44_RS06130 1201463 .. 1201475 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
CHC44_RS06140 NONE
CHC44_RS06145 NONE
CHC44_RS06150 NONE
CHC44_RS06155 1205677 .. 1205710 + -16.7  -3.82205   GAGAAATAAGACCCT     GAC-GGCCCGGTGGCG TGG CGCCATCGGGCCTGGC     TTGTTACTGTATTCC 100 32
CHC44_RS06165 1206892 .. 1206904 +  -2.7  -2.66979   AAATGTGGTCAGAAA                TGAGT GTC ATTCA                CTTATAACTTATCCT  40 411
CHC44_RS06170 1208042 .. 1208059 +  -8.4  -4.08064   GTAGGCATAAAAAAA             CCAGCC CTGACA GGCTGG              TTTTCAAGGGGAATT  78 413
CHC44_RS06185 1209258 .. 1209270 + -10.5  -3.10344   AGATGACACATTATT                CGCCG ATG CGGCG                TATCTTAAATCAGAG  73 155
CHC44_RS06190 1209751 .. 1209763 +  -3.4  -2.73543   CAGGAAGAGATGATG                TCTG CCGGA CAGA                TACTATATGTAAATT  43 149
       sspH2 NONE
CHC44_RS06205 1212749 .. 1212766 +  -8.4  -3.04894   GGATATATAAAAAAA             CCAGCC CTGGCA GGCTGG              CTTTTAAGGGGAATT  66 302
CHC44_RS06225 NONE
CHC44_RS06230 1216857 .. 1216872 + -11.8  -5.10208   TAAACGCATAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 95
CHC44_RS06245 NONE
CHC44_RS06250 1221141 .. 1221182 +  -7.3  -2.63596   GTGACGGGCGCGCTG TCCCTCAATGGCGCC GAAGAATGCGCA GGCGGCGTTGGGGGA  TGCTATCCGCTACAC  57 37
CHC44_RS06255 1222277 .. 1222296 +  -3.4  -3.71924   GCGCCTGAAAGCGTA            GGCTGGTG GACG CGCAGGCC             TTCTTCGATAATTTG  51 438
CHC44_RS06295 1230317 .. 1230352 + -11.4  -3.25652   GAATATCATCATAAA    TTACCTTCAACGAT-GT AAA ACTATCGCTGAAGGTAA    TGTTAATTACATAGG  81 152
CHC44_RS06320 1233764 .. 1233782 +  -4.6  -3.42257   TCGATATCATGAATT             TGATAGCT TAT ATCTATCA             TTGATGTATTTACCG  52 323
CHC44_RS06325 NONE
CHC44_RS06330 1234831 .. 1234847 +  -2.1  -3.19602   CGAACCGGCAATGAT              CCAGCCG ACG CGAATGG              TATTGGTATACAGCG  43 213
CHC44_RS06340 NONE
CHC44_RS06345 NONE
CHC44_RS06350 1240050 .. 1240067 + -11.3   -5.4833   AAACACGCTAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTATTGCCTGA 100 44
CHC44_RS06365 1243087 .. 1243100 +  -3.7  -4.80882   AGAGGAGGGCTGCCC               GGGCG GCAT CGCCA                TTTTTAGTATCCGCT  71 47
CHC44_RS06370 1244802 .. 1244819 + -11.3  -6.07374   ATCTGACTCTTCTAA             CCCTCTC ATTC GAGAGGG              TTTTTTGTTTTTTCT 100 103
CHC44_RS06380 1247066 .. 1247102 + -12.9  -2.62616   ACCGTTTCTGACAGA    GACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGAA    TGCTATAACCGATGC  84 30
CHC44_RS06395 NONE
CHC44_RS06400 1251547 .. 1251560 +  -8.1  -2.60392   GAATGGCGTCCTGCG               GCTGG CTGG CCAGC                ATTAATTCGCAGCTA  59 247
CHC44_RS06415 NONE
CHC44_RS06420 1254370 .. 1254382 +  -3.4  -3.85698   GGCTGTAACCGTTTC                CATC CCTGT GATG                TTTCTCACGCAGCCC  53 69
CHC44_RS06425 1255527 .. 1255544 +  -6.3  -4.21989   GTAACCGTTTTCAAT             CTGTGAG TAAA TTCACAG              TTTATTAACATTGTG  70 54
CHC44_RS06430 1257079 .. 1257100 +  -3.7  -2.70932   ATAACGTATTTCTTT           TG-CCATCCG GCG CGGATAGTCA           TAATTAAAAAGGCCG  45 109
CHC44_RS06435 NONE
CHC44_RS06440 1259708 .. 1259736 + -10.2  -3.14211   CTTGCTTATCAGATA       ACCCGGCGCAGCG AAAC TGC-GCGCCGGGC        TTCATACCGCGAGCT  74 58
CHC44_RS06485 1268215 .. 1268227 +  -3.3  -2.89881   CGTCGTAAACGAATA                AGGAG AAT CTCCA                TGTCTGAAATAAATC  44 25
        gtdA 1269247 .. 1269257 +  -2.4  -3.81146   GCCCTGGGGCTGTTC                 CGCG AAG CACG                 TTATTAATTAGGGAG  51 8
CHC44_RS06495 NONE
        maiA NONE
CHC44_RS06505 1271908 .. 1271928 + -11.9  -5.58454   TTTGCTCATCGCAGA            GAGGCGTTA TGA TAGCGCCTC            TTTTTTTGCTGTGGA 100 91
CHC44_RS06510 1273150 .. 1273167 +  -6.3  -2.50575   CGTATTGCAGCAAAA             TCGTTCA TTTA TGAACGG              GTTAGTGGGACTTTT  53 286
CHC44_RS06520 1274779 .. 1274794 +  -3.2  -2.71011   GGCGGCGGTTATCAT              TCCTGA TTTT TCCGGA               TGATTCAGACAGGGT  43 20
CHC44_RS06525 1275620 .. 1275634 +  -4.9  -3.32963   AAAATAAACGCCGGG               TGCCG GATGG CGGCG               TTATGCCATCCGGAT  54 34
CHC44_RS06535 NONE
CHC44_RS06540 NONE
CHC44_RS06545 1278250 .. 1278268 +  -3.7  -3.88787   TTTGCCGATAAAAAC             GCGTCAG CGTTT CCGGCGC             TTTATACAGATGTCC  56 187
CHC44_RS06555 1282455 .. 1282473 +  -8.8  -2.88663   AGCCTGCCGTCAACA             GGGCGC GATAGCA GCGCCC             TGTCTGGCAATGACT  65 40
CHC44_RS06560 NONE
CHC44_RS06565 NONE
CHC44_RS06570 NONE
CHC44_RS06575 1286579 .. 1286589 +  -6.8  -4.37092   GTTGCTGCTGCTGCG                 CCAG CGT CTGG                 TTTTCTCCGCACCAT  74 238
CHC44_RS06590 NONE
CHC44_RS06595 NONE
CHC44_RS06600 1290870 .. 1290887 +  -2.7  -3.34102   GCTGTCATGTTATTT             TGCTTTC CCTG GAGAGTA              TCGTTTTTCTGATCG  47 512
CHC44_RS06620 1295179 .. 1295214 + -17.2   -3.1478   CCAAAGAGAATATGA    CATTCACTGCATTAAT ATAT ATTGATGCAGTGAATG     TATTAATAAAATAAT 100 56
CHC44_RS06625 1295726 .. 1295755 + -18.1  -5.82036   TTATTAATTCCGCAG       GCCCATATCATTG ATAT CAATGATATGGGC        TTTTTTATTTGTTGT 100 44
CHC44_RS06630 NONE
CHC44_RS06635 1297268 .. 1297299 +  -2.3  -4.70772   TAAACAGGAGTTCAT      CATGCTAAG-GATG ACGCC CATCGCTTCGCTTG      TTTTATTGACTCTGT  64 38
CHC44_RS06640 NONE
CHC44_RS06645 1301017 .. 1301037 +  -8.2  -5.64274   ACATGGGGCTGTATT            TCCCCCTC TGGAT GAGGGGGC            TTTTTTTATCGATGA 100 261
CHC44_RS06655 NONE
        thiD 1303336 .. 1303348 +  -4.8  -2.66964   TCCGGTACATCATTT                CCAC GCGTG GTGG                TAGTATACTGCCTAC  48 10
CHC44_RS06665 1304596 .. 1304616 +  -2.4  -3.14132   CCACTGGATCAGTGG            CTCGCCAC AGGAC GAGGCCAG            TTGATAGCCGGACAG  42 488
CHC44_RS06685 1309117 .. 1309131 +  -8.5  -3.99805   GATAAGATAGGAGAC               GCCGC CCAAT GCGGC               TTTAAGTTTTTCCGG  74 495
CHC44_RS06695 NONE
CHC44_RS06700 1311422 .. 1311447 + -11.9  -3.57561   TATATGCAACCGCCG         CCTGGTTGCAA ATGA TGGCAACCAGG          TTTACCAGCTTCCAG  81 413
CHC44_RS06775 1332411 .. 1332424 +  -3.7  -4.08767   AGAATAACCTGGCAG               CCGCG TTGC CGCAG                TTTTCGCAGAGTCGC  60 312
CHC44_RS06785 1336094 .. 1336119 +  -2.6  -3.14132   GTGATAACCTGGTTA         GCCCTTGA TGTGCTTGAT TTAAGGGC          TTGATGCGCGAAAGG  45 65
CHC44_RS06790 1336732 .. 1336749 +  -2.6  -2.53263   TAAAGACTGAGCCAT             TCGGCG CAATAC TGCCGG              TCCATTGAGGGTAGC  40 31
CHC44_RS06795 1338929 .. 1338941 +  -6.2  -3.83026   CACCAAATCCTCCAG                CGGC ATATG GCCG                TTTGCTGTCCAGGAA  63 333
CHC44_RS06810 NONE
CHC44_RS06815 NONE
CHC44_RS06820 NONE
CHC44_RS06825 NONE
CHC44_RS06830 NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 1349855 .. 1349872 +  -4.1  -3.54424   GCGCGTTCAGAAAGT             TACTCCC TAAC GGGACTA              TTTGAGGAAATGAAA  52 16
         gmd NONE
CHC44_RS06860 NONE
CHC44_RS06865 NONE
        wcaI NONE
CHC44_RS06875 1355097 .. 1355121 +  -3.5  -3.30124   GCGGTTCGAGGATCG          TTACGGGCG GGTCTGA CGCCTGCAA          TTATGCCCGGTAAGC  48 10
CHC44_RS06880 NONE
CHC44_RS06885 1358086 .. 1358101 +  -4.6  -2.60508   CCATATTGCACCAGG              GCAGCG TGTA CGCTCC               GGTTTTTCCGCGCTG  46 70
CHC44_RS06890 NONE
        wcaK NONE
        wcaL NONE
        wcaM 1363596 .. 1363606 +  -2.6  -3.14211   GGTAAGTACCGCTAT                 TTTT ACG AAAA                 TTCCTGGGAAAAAGT  45 36
CHC44_RS06910 1364699 .. 1364750 + -12.3  -4.75518   TGATAAACATAATAA CGGCAGTGAACATTCGAAGCGGC AAGTTG GCTGAAACGAATGTTGACTGCCG TTTTAGTTTTGTATA 100 68
CHC44_RS06915 NONE
CHC44_RS06920 NONE
CHC44_RS06925 NONE
CHC44_RS06930 NONE
CHC44_RS06935 NONE
CHC44_RS06940 1372249 .. 1372274 +  -7.1  -4.30416   TCTTTTCGGATAGTA         TAAATAATCAT TGAT GTGATTATTTA          TTTTACCTTCCTGGT  77 176
CHC44_RS06945 1373977 .. 1373989 +  -4.9  -2.91924   AAGTATTTAATATGC                TTTAC GCT GTAAA                ATTTGTAGCACATAA  50 92
CHC44_RS06950 1375473 .. 1375491 + -11.7  -6.06529   TGCAAAAATGTTTAA             GCCCGGT TTAAT ACCGGGC             TTTTTTTTATCTCTA 100 45
CHC44_RS06960 1376865 .. 1376884 +   -10  -3.10512   TGATTAATAAGGCAA            TCGGGGCT GATG AGTCCCGA             TGATTTATTGACCAT  73 34
CHC44_RS06965 1378037 .. 1378051 + -12.8  -5.48303   TTTCTCATTAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 80
CHC44_RS07015 NONE
CHC44_RS07020 1387445 .. 1387472 +  -9.2  -5.63103   TGCAAAAAATGACAC        TAACCGACGTTT TAAT ACGCGTCGGTTA         TTTTTTTGCTTCAAA 100 127
        yoeI NONE
CHC44_RS07025 1389015 .. 1389033 +   -16  -5.43414   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTCTGTCAT 100 53
CHC44_RS07040 NONE
CHC44_RS07045 NONE
CHC44_RS07050 NONE
        phsB NONE
CHC44_RS07060 1397540 .. 1397575 +   -12  -2.99251   CCATAAAATAAAGTC    AGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCA     ATTTATCCATGTTTG  81 47
CHC44_RS07065 1398926 .. 1398941 +  -3.3  -2.79796   AAGGCTGTAATTATA              CTGTA CATTCA TACAG               TATAATAAAGTGACG  43 137
CHC44_RS07070 NONE
CHC44_RS07075 1400715 .. 1400728 +  -2.3  -3.53012   GGCAACGATTTTATC               CCCGA ACCT TCAGG                TTTCCCCAGACGGCG  47 131
CHC44_RS07080 1401197 .. 1401231 + -10.7  -3.53563   CTGAATAATGCGCTA     CGGCAGTGGGAGCGT ATATC AGGCTCTCACTGCAG     TTTGACCCCGCCTGT  81 33
        pduF 1419404 .. 1419423 + -12.2  -4.47259   CGAACTGATCAAAAC            GTCTCCCA GCAA TGGGAGAC             TTTTGATATTGTCAT 100 113
        pocR 1420830 .. 1420843 +  -8.1  -2.82516   GGGTGAAAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  60 411
CHC44_RS07200 1422403 .. 1422413 +  -2.4  -3.23715   GTACTGGCTGGCGGC                 GGCG AGG CGCG                 TATTATGACGATTCT  44 7
CHC44_RS07205 NONE
CHC44_RS07210 NONE
        cbiD NONE
CHC44_RS07220 NONE
CHC44_RS07225 NONE
        cbiF NONE
CHC44_RS07235 NONE
        cobJ NONE
CHC44_RS07245 NONE
CHC44_RS07250 NONE
CHC44_RS07255 NONE
CHC44_RS07260 NONE
CHC44_RS07265 NONE
CHC44_RS07270 NONE
CHC44_RS07275 NONE
CHC44_RS07280 NONE
CHC44_RS07285 NONE
CHC44_RS07290 1436430 .. 1436447 +  -4.8  -2.76696   AATTGATCTTTCTGC             TGGCTC TATTAT GAGCCG              ATTATTACGGACGAG  49 12
        cobT NONE
CHC44_RS07300 1438944 .. 1438973 +  -2.9  -3.57561   TCTCATCACTTTGTT       GC-ATTTGCAGACA TTT TTTCTGCAAAAAGC       TTTGCAGCCTTACGA  50 422
CHC44_RS07310 1440567 .. 1440580 +  -2.3  -3.36273   ACAGGCTTTGACAAG               CCAGG GGCA CCTCG                TTAATATTCGCCCCG  45 127
CHC44_RS07315 1440745 .. 1440772 +   -12  -5.05782   AATAAATTATCTTTA        CCCGGTTGACCT GAGA AGGTTTACCGGG         TTTTTTGACATCCAT 100 89
CHC44_RS07325 NONE
CHC44_RS07330 NONE
CHC44_RS07340 1443611 .. 1443646 + -12.6  -2.87146   AAGTGGCTGAATGAA    GCCTTAGCGGGAGGCG GTTC TGTATCCCGTTAAGGC     CTTATTGTGCCGCGG  82 102
CHC44_RS07405 1452730 .. 1452744 +  -5.8  -3.05463   AGAATACACTTAGAA               TATTCT GTT AGAATA               TTACGTGAAAAACGT  52 89
CHC44_RS07410 NONE
CHC44_RS07415 NONE
CHC44_RS07420 NONE
CHC44_RS07425 1454986 .. 1455001 +  -3.2  -4.25104   AGTTGCCAAATCATC              CCCGTT CTCT AACCGG               TTTTGGTCGCACAAG  60 64
CHC44_RS07430 NONE
CHC44_RS07435 1455823 .. 1455837 +  -7.1  -5.60993   AAATAATTCATATTA               GCTCC GTACA GGAGC               TTTTTTTATGCCCGG 100 35
CHC44_RS07445 NONE
CHC44_RS07450 NONE
CHC44_RS07455 NONE
CHC44_RS07460 NONE
CHC44_RS07470 1462942 .. 1462956 +  -4.2  -3.23733   TGTGGCGAAAATTCG               CGGTGT TTC GCACTG               ATTTTCTACAATGAA  48 10
CHC44_RS07475 1463225 .. 1463244 + -12.8  -4.34402   AGCCCGATGACAAAA            CGCCCGGT TAAT GCCGGGCG             TTTTGCTGTGGAGAA 100 31
CHC44_RS07480 1465446 .. 1465458 +  -4.7  -3.14211   TATCGCGCCAGATCA                GCGAC ACC GACGC                TTCATGCAGACGGGT  47 375
CHC44_RS07495 1466843 .. 1466854 +  -4.4  -4.28115   TGTCAGCCGTACTAC                GTGA TAGA TCAC                 TTGTTTATTATGCGT  66 118
CHC44_RS07570 1479284 .. 1479302 +  -5.4  -3.91792   GACTCCAATAATGGA             GATGAAAA TAA TTTTTATC             ATTTTTTTGGCTTCT  61 478
CHC44_RS07590 1481728 .. 1481738 +  -2.4  -3.30554   GCGTTGCAGAAGAAC                 GTCG CTT CGCC                 TTGATCATTAGTTAC  43 117
CHC44_RS07615 1487229 .. 1487244 + -10.4  -5.26875   GTGGTACACAATCAA              GGCAGC GAAA GCTGCC               TTTTTTAATTCCGGA 100 64
CHC44_RS07620 1488482 .. 1488505 + -10.2  -4.04318   TGACATAGTTTTATT          CGGGGTGGGC GCTT GCGCATCCCG           TTTATCCTATCTGGC  82 33
        fliA NONE
CHC44_RS07630 NONE
CHC44_RS07635 1491017 .. 1491034 +  -5.5  -5.67283   ATGTCAGCAAACGGA             GGCGCGTG AAT CG-GCGCC             TTTTTTATTTCCGTT 100 95
CHC44_RS07640 NONE
CHC44_RS07645 NONE
CHC44_RS07650 1493715 .. 1493726 +    -3  -3.39327   GTTAATTTAAGTCAT                TCAT AATA ATGA                 TTATCAATATCAAAG  46 215
CHC44_RS07655 1494512 .. 1494538 + -12.2   -5.1861   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC 100 58
CHC44_RS07670 NONE
        uvrC NONE
CHC44_RS07680 1498315 .. 1498327 +  -4.1   -3.5394   ACGCGGAGATTTGCT                TGATC AGT GATCG                TTTCGCCGCAAATTT  52 16
CHC44_RS07685 NONE
CHC44_RS07690 NONE
CHC44_RS07695 1498820 .. 1498833 +  -8.1  -5.66684   AGCAGTGTCGTGAAA               CCACC TACG GGTGG                TTTTTTTGTGCCTTC 100 70
CHC44_RS07700 NONE
CHC44_RS07705 1501172 .. 1501191 +  -3.5  -3.75738   GATGTGATTATGTGC            CTCACAC ATTGAA GTGAGAG             TTATTGCTGGTGGTA  53 187
CHC44_RS07710 1501570 .. 1501589 +  -6.4  -4.52589   CATGAGTATAATATA            GCGAGAAA CCCA TCTCTCGC             TTTTGTGTGGGGCGA  76 46
CHC44_RS07715 1502479 .. 1502515 + -18.1  -3.66874   CGGTCATAGCGTGAC    GATTATCGAGCCTGGAC GGC GTCCGGGCCCGGTAATC    TTTGCCTGGCATTAA 100 52
CHC44_RS07725 1504416 .. 1504438 +  -2.8  -3.59867   GTCGGATAATCCTGG          CTGG-TCAT TGCGGC ATGAGCCAG           TTCATTAATTTTTTG  49 237
CHC44_RS07740 1506591 .. 1506610 +  -9.2  -3.23692   GCTTCATCTGCCAGA            CGCGACAG CGTG CTGGCGCG             TTGCTGATAATCCTC  65 400
CHC44_RS07750 1508394 .. 1508428 + -14.4  -3.91897   ACAGTATAGCTTCAC    G-TCATCGCCAGCCG CTACCC CGGCTGGCGATGGTC     TTTCTAAATGGCGAG 100 413
CHC44_RS07755 NONE
CHC44_RS07760 1511084 .. 1511101 +    -4  -3.55761   TTTCGCCTGAACAGG             GCGGGC GATAGA GACCGC              TTTAGCCAGTAGCTG  51 388
CHC44_RS07775 NONE
CHC44_RS07780 1512912 .. 1512935 + -15.4  -6.15259   TGGACAAACACTCCA          GCAGCGGTAA GTTA TTACCGCTGC           TTTTTTTTTGCCTTG 100 52
        motA NONE
CHC44_RS07790 NONE
CHC44_RS07795 1516826 .. 1516841 +  -3.2  -2.75064   CCGCGAACAACGTAT              GGCG ATCACAGC CGCC               TGATTGAGTGAGAAG  43 7
CHC44_RS07800 1517374 .. 1517402 + -19.7  -3.07233   CGTCGCGTAATAACG        TTGCCGGATGGCG TCG CGCCATTCGGCAA        TATTCACCGTTATGC 100 31
CHC44_RS07805 1519366 .. 1519388 +  -6.9  -2.76483   GTAATACGGGAAGCA          TGGCGCTGCC GCAG GGC-GCGCCC           GTTGTACTTTGAATG  55 125
CHC44_RS07810 NONE
CHC44_RS07815 NONE
CHC44_RS07820 NONE
CHC44_RS07825 1522447 .. 1522478 + -13.1  -3.10493   GAATCCGTCAACCCG      GCCGGATACGAGA CTTTCT TATCGTATCCGGC       TATCTCTATTAACGC  86 78
        flhB NONE
        flhA NONE
        flhe 1526217 .. 1526235 +  -4.5  -3.56042   ACCGTCCCTTTCTTT             GCCAGGT AGCAG ACCTGAC             TCTCTTTTTGAATAA  54 40
CHC44_RS07845 1527709 .. 1527734 + -10.3  -4.09685   TTCGCATGATGGGCG         CGGCGGTAACG CCGT CGCTTCCGCCG          TTTTCCAGAATCAAG  86 156
CHC44_RS07860 NONE
CHC44_RS07865 1533045 .. 1533069 +   -10  -5.71983   TGCTTGCTCGTACCA          GGCCCCTG CCAATTCAA CAGGGGCC          TTTTTTTCTCCTTCA 100 73
        aspS NONE
CHC44_RS07905 1539456 .. 1539476 +  -3.2  -5.40474   AAGAGTTTGTCATTA           ACGTCGCCT GAAA AGGCG-CGC            TTTTTTTGAGGAAAT  81 15
CHC44_RS07910 NONE
CHC44_RS07915 1540774 .. 1540791 +  -4.8  -2.64616   TCGCGGCTGAATTTA             GCGCGT GGGAGA ATGCGC              TGATGTAAATGCAGG  48 5
CHC44_RS07920 1542362 .. 1542392 +  -5.4  -2.78816   ATATATCTGTCAGTC       ATTTGACAGGCC TCGTATC GGCCTGTCAGGA       TATACTCGCGAGTGG  50 66
CHC44_RS07935 NONE
CHC44_RS07940 1545909 .. 1545927 +  -3.8  -3.21934   CGCCTGAAGTCGCTG             CGCTCA TCAGACC TGGGCG             ATTTTGTAGGCCCGG  48 41
CHC44_RS07955 NONE
CHC44_RS07960 1549884 .. 1549906 + -13.4   -5.8901   AAATGCGCTGACAGA           GCCGGTACGC GAT GTGTGCCGGC           TTTTTTGTTTTGTGT 100 42
        msbB 1550961 .. 1550978 + -11.3  -3.96148   CATCAAATAAATAAA             GCCTCTC GTAA GAGAGGC              TTTATGCTGACAAAC  91 31
         zwf 1555360 .. 1555385 +  -5.4  -5.80364   TTTTTGCACTTTTAA         GCCTCGTGTGG ATTCA CC-TGCGAGGC         TTTTTTTATTACACT 100 105
         edd NONE
CHC44_RS08000 1558077 .. 1558109 + -11.4  -3.08046   GTCTGATAAAAATGC     GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC      CTTTTACCGTCACGC  79 97
CHC44_RS08010 1559716 .. 1559726 +  -4.6  -4.41206   CTGAACCCACACTTG                 CGCT CCC GGCG                 TTTTGTACCATGCTT  66 37
CHC44_RS08015 1560128 .. 1560140 +  -5.5  -4.17048   TAAGCCCCGCTAGCA                GCGTA ATT TGCGC                TTCTTTTGCCGGAAC  67 28
CHC44_RS08020 1560904 .. 1560918 +  -5.6  -3.39908   TTAAGTAACATGTTT               CGCTTG CAT CATGCG               TGTCTTTTGCCACCC  56 51
CHC44_RS08025 1563326 .. 1563343 +    -7  -3.53012   TTTTGCGACTTCAGA             TACCGC CTTACC GCGGTA              TTTACCGAACGAGAA  60 209
CHC44_RS08045 NONE
CHC44_RS08050 NONE
CHC44_RS08055 1566672 .. 1566699 +  -8.5  -5.76633   ATTTTTAATAAAAAA        CCGTAAACCTT CACGAA AAGGCTTACGG         TTTTTTTATCTCTGA 100 44
CHC44_RS08060 1566862 .. 1566891 +  -7.3  -5.74684   AAGAGCCATTTCCCT       G-GACCGAATAC AGGAATC GTATTCGGTCTC       TTTTTATTTTTCTTA 100 57
CHC44_RS08075 1569075 .. 1569103 +  -3.8  -3.63991   AGTCAACGCCCAGAC       CGCCGCCCGTATT ATTG AACA-GGGCCGCG        TTATTGCCCGTGATG  53 247
CHC44_RS08115 1572515 .. 1572525 +  -5.4  -3.05343   GCGGCTGAAGCTAAT                 CATG TGT CATG                 TATTGCAAATGTCAA  52 77
CHC44_RS08120 1572941 .. 1572975 + -11.7  -3.67976   TTAAACTATCGTAAT    GGAACAAAGAGTTACT TTAA AG-AGCTCTTTGTTCC     TTTAACCTTGATGAA  89 108
CHC44_RS08145 1576658 .. 1576668 +  -5.4   -3.0641   ATTTCCGAAATTTTC                 CAGA ATT TCTG                 TATTCCGGGCTTTTT  52 428
CHC44_RS08155 1578794 .. 1578823 +  -2.2  -3.82261   CTCTTCTGTTGTGAT      TGGTG-ATGTGACG GGAT CGTC-CATGCACCC       TTCCTTTTATTGACG  51 388
CHC44_RS08175 1579969 .. 1579981 +  -6.3  -2.79915   ATTTGAATACCCATA                GCTTT ATG AAAGC                TGTAATCAGGTAGCT  53 50
       sopE2 1583011 .. 1583042 +   -11  -4.75288   CTATATATTCATTTT      TATGGCGACGCTTT TAAC AAAACGTCGTCATA       TTTATTTTAATATAA  95 98
CHC44_RS08195 1583423 .. 1583472 + -19.4  -4.66318   GAACAGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATGAT 100 61
CHC44_RS08200 1584555 .. 1584570 +    -6  -4.44608   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  76 319
CHC44_RS08230 1590992 .. 1591011 + -12.2  -3.15996   GTAGCAATTACTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCTG  83 53
CHC44_RS08235 NONE
CHC44_RS08240 1593824 .. 1593845 + -13.1  -6.06723   ATAAGTAACGCTAAA           CAGGCACAA AAAA TTGTGCCTG            TTTTTTTTTAACAAG 100 33
CHC44_RS08245 1594916 .. 1594933 + -12.7  -5.42259   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 50
CHC44_RS08255 1597310 .. 1597332 +  -9.9    -5.626   TGACGTTAAAAAAAA           GCAGCTACG AAAAA TGTAGCTGC           TTTTTTTATAACATC 100 56
        mgrB NONE
CHC44_RS08270 1598676 .. 1598689 +  -3.9  -4.88288   ACAAAAAGCGGTGCC               GAAAA TCGC TTTTC                TTTTCTATTATTTTG  71 312
CHC44_RS08275 NONE
CHC44_RS08280 1599452 .. 1599470 + -12.4  -4.89009   AGCCTCAGATATAAA             GCCTCGCT AAA AGCGGGGC             TTTTTAATTCAATAT 100 74
CHC44_RS08285 1601381 .. 1601408 +    -7  -3.53224   TAAAGGATTTTCCCG        GGGCGCAATT CGCGTTAC ACTTGCGCCC         TTTAGCGCCCCAGTC  62 38
CHC44_RS08290 1602253 .. 1602276 + -10.4   -2.5655   CGTTAACCGTGAAAA          T-GCGTCCAGA GGA TCTGGACGCCA          ATTCCTATCAGTACG  70 35
CHC44_RS08325 NONE
CHC44_RS08330 1608499 .. 1608551 + -12.5  -3.09635   ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT  81 75
CHC44_RS08355 1614228 .. 1614238 +  -2.4  -4.56597   AGAATACGTGACTTA                 CTGG AGC CCTG                 TTTTTCCAGCACCGC  65 209
CHC44_RS08365 NONE
        tsaB NONE
CHC44_RS08375 1617864 .. 1617888 + -14.4  -2.56596   GTTTTATCAATAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTCATAGAGAC  81 47
CHC44_RS08385 1619756 .. 1619772 + -11.5  -5.75342   TCAGCTAACGAGAGA              CGCCGGT TAA GCCGGCG              TTTTTTTTGGCGCGA 100 49
CHC44_RS08390 1621005 .. 1621020 +    -9  -5.14563   TAAAAAAATAAAAAA              GGCAGA TTCT TCTGCC               TTTTTTAATCCAGGA  93 98
CHC44_RS08410 1623296 .. 1623306 +  -8.2  -2.55544   CGTTAAACGGTATTC                 GGCG CCG CGCC                 TGAATTCCATCATGA  59 35
CHC44_RS08415 NONE
CHC44_RS08420 1624539 .. 1624554 +  -2.5  -3.98291   GGGCAGAATAAGTCT              TCGGC AAAACG GCTGA               TTGTTTACAATTCTT  54 30
CHC44_RS08425 1625056 .. 1625072 + -10.1  -5.18561   CAACCGCCTGATGCA              CCGTCTG TGC CAGGCGG              TTTTTTACATCTTTC 100 58
CHC44_RS08430 1625888 .. 1625903 + -10.4  -2.98823   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC  73 525
CHC44_RS08450 1629349 .. 1629360 +  -4.4  -4.27617   GTTGCTCAGGTTATA                CTGT GACG ACAG                 TTTTGATCGAATCTC  66 309
CHC44_RS08460 NONE
         alr 1633367 .. 1633398 + -13.7  -3.29043   TGACTCAGGCTAAGG      CGTCGACCGGTCC ACCTGG GGGCGGGTCGACG       TTGTCCGGCGACCTT 100 43
CHC44_RS08480 1637020 .. 1637077 +  -7.1  -3.14257   ATAATCCGCTGCAAC TC-CCGCTCTACCGCC-GGGCTGACGTT AAGGA AACGAAAGCTCAGGCGG-GGAGTGGTGA TCGTTTCATTTTTCC  54 106
CHC44_RS08490 1638130 .. 1638157 +   -12  -2.62184   TGCAAAACGTGTAAG        CGTTGACCCGGT CAGC GCCGGGTCAACC         TACTATAAACACGCG  79 45
CHC44_RS08550 1651966 .. 1651983 + -11.3  -4.53707   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGACTTTCTT 100 104
CHC44_RS08565 1654402 .. 1654428 + -10.1  -2.65388   AGCTAACCGGTTCAG        GCCCGGTAAGCG TTAT CGCC-ACCGGGC         ATTGTCCATTAACTG  70 35
CHC44_RS08590 1660520 .. 1660532 +  -2.7  -3.59262   CACACACCACACTTT                TTTAC AGG GTGAA                TTTACGCCTATGAAG  50 44
        prfA NONE
        prmC 1662433 .. 1662443 +  -2.4  -3.05597   TGGTAATGAACGCGT                 GACC TGC GGAC                 GTTTTACGCCATGAC  42 1
CHC44_RS08605 NONE
CHC44_RS08610 NONE
CHC44_RS08615 1664571 .. 1664592 + -10.2  -5.36441   TTTTAGCTTGTGTAG           GCCGGATA AGATAC TATCCGGC            TTTTTTATATCAGGC 100 48
        chaB 1666249 .. 1666276 + -12.8  -2.77962   TGCCGGAAGTCTATC        CTG-ACGCGGGAG CTT TTCCCGCGTACAG        ATTTAAAATGTCAGC  82 75
CHC44_RS08635 1668405 .. 1668419 +  -5.7  -3.19192   CTTCAGAATATCGCG               CTCAC GCGGG GTGAG               TTGCGTTACATCGCG  54 197
CHC44_RS08650 1670916 .. 1670933 +  -3.3  -4.64464   TAATAACTATTTTTA             GTCGCCG GTGA TGACGAC              TTTTCCTTTGATTTA  66 15
CHC44_RS08655 1672428 .. 1672446 +  -8.8  -5.83822   TTTTGATTATCCTTT             GCGCGG CGTTAGA CCGCGC             TTTTTTTTACCTGTA 100 42
CHC44_RS08660 NONE
        narH NONE
        narJ NONE
        narI 1679479 .. 1679494 + -10.4  -5.65177   TCTCGATGCCCTAAA              CTCCGC TTCG GCGGAG               TTTTTTTATGGCTGT 100 46
CHC44_RS08685 1681380 .. 1681398 +  -8.8  -3.92373   GCTTCGCCCTTCGGG             TCGTTGCC TGC GGCAACGC             TTTCTCGCTGCGCTC  76 176
CHC44_RS08725 1684635 .. 1684652 +  -2.6  -3.23853   TTCTGACAGGCGCAA             GCGGCA ATACCA TGCCAC              TATTGATTAAAGCCA  45 68
CHC44_RS08730 1685754 .. 1685764 +  -5.4   -4.0056   CGACGAGTGTTACTA                 TCTG CGG CAGA                 TTTATAAGTATTTGT  63 83
        galU 1686835 .. 1686853 +  -9.5  -5.64274   AATTTTTTAACAGAA             GCGCTGG TAAAT CCGGCGC             TTTTTTTATGCCTGG 100 53
CHC44_RS08745 1688783 .. 1688800 + -12.7  -3.85864   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 176
CHC44_RS08755 1692653 .. 1692674 + -13.7  -3.36492   ACCTGCTGATTTACA           GGCGGCGCCC TAA GGG-GCCGCC           TTGTGACATTCCCAC 100 47
CHC44_RS08765 1695035 .. 1695060 + -16.3  -2.80583   ACATTAATGGCAAGA         CATGGGACAAC TGCG GTTGTCCCATG          GTGTCTTTTTTCATC 100 34
CHC44_RS08770 1696044 .. 1696058 +  -2.8  -3.20616   ATGTGCTCTATGCCG               TTATCG ACC CGAAAA               TTCGCTATTGATACT  45 0
CHC44_RS08775 NONE
        oppD NONE
CHC44_RS08785 1699019 .. 1699039 + -12.6  -4.21812   CCGTTATAATCGCAA            GGGCTGAC AATTC GTCAGCCC            TTCTTTTAGGTGAGG 100 32
CHC44_RS08790 1700236 .. 1700253 +  -3.4   -3.6579   GCCTGCTCAAGCGTT             TCGTCT TCAGTC AGGCGA              TTGTTCAGATCCATT  51 365
CHC44_RS08815 1703656 .. 1703684 + -10.3  -2.54504   ATGTCATTCCTTCCA        CGCGTACGGTT ACAACCC GACCGTGCGCG        ATCTCTTTGGCCAGT  65 312
CHC44_RS08840 1707034 .. 1707046 +  -9.1  -2.56271   GCTACCTCGCGGATC                GTCGC CTT GCGAC                ATGTTGTAGTACACG  59 323
CHC44_RS08895 NONE
CHC44_RS08900 1717884 .. 1717899 + -11.8  -2.69188   ACGCGGCCTTAAAAT              GGCGCG GCAA CGCGCC               GTTCATTCTCCTGTT  79 60
CHC44_RS08905 1718866 .. 1718895 + -10.8  -3.14931   AATCATCAGACAAGA       GG-GTTTGTGCCG GATGG CGGCGCAAACGCC       TTAATCCGGCCTACG  78 66
CHC44_RS08920 1721553 .. 1721581 + -16.1  -2.56596   GATGTAAACCGCTAT        TGCCGGATGGC ATTCAGC GCCATCCGGCA        TGGATTAATCAACCA 100 34
        topA 1724866 .. 1724883 + -14.1  -5.37043   TCACTATAGTCAAGC             GGGCCGC GTAA GCGGCCC              TTTTTTATATACCCT 100 54
CHC44_RS08945 1726367 .. 1726378 +    -3  -4.20516   AATAGTTATCTTGAG                TCAA AAGA TTGA                 TTTATTCACTGGCAA  58 169
CHC44_RS08950 NONE
CHC44_RS08955 1727028 .. 1727053 +  -9.1  -4.90136   TCTAATCTCGTCAAA         GCCCGATAA TGCGTTAT TTATCGGGC          TTTTTCATCTTCGTT  93 238
        acnA 1729884 .. 1729914 +  -9.6  -2.84051   GAACTAAAGCCGTTT       ATCGGGCCTGCC GTAAACA GGCAGGCCCGCG       CTTTAATACCGGTGG  70 34
CHC44_RS08970 1731533 .. 1731564 +  -5.2  -3.54543   CTGATGGCGGGCGCA      TTTCCA-TTTCGCGC GAG GCGGGAAAATGGTAA      TTTAGAAGGCTGGAT  56 77
CHC44_RS08980 1731914 .. 1731925 +  -5.8   -3.2963   ACGTTGCGGTCCCTG                CCGA CTCG TCGG                 TTGTAAAGGAATAAT  56 0
CHC44_RS08985 1733197 .. 1733224 +  -2.8  -3.64703   ATCGGCGGCCAGGGC        TTATCAGGTT GTCAATCG AACCTGTTAA         TTTCCCTGCGCCGCA  51 107
CHC44_RS08995 NONE
        yciH 1734824 .. 1734834 +  -5.4  -3.50555   GGGTATATCACGCAG                 GTGA TAG TCAC                 TTCCTGTTATTTCGC  57 480
        steC 1744851 .. 1744874 +  -2.4  -5.20534   ATATATTGTTTTTTT          CGATCATTTT TTAT ATATTGATCG           TTTTTATTGATTGAT  74 403
CHC44_RS09060 1745975 .. 1746001 +  -7.8  -3.85698   TTTAGGGCGTAAAAT         CAGCGCGCGGGC CAG GCCCAGACGCTG         TTTCTGCCCCGGCGC  68 353
CHC44_RS09095 1752896 .. 1752921 +  -3.1  -3.70902   AATGACAATGGCGGC         GCCGATACGCG CCGT CGCTCATCAGC          TTTAGGTGTAAGGAG  51 39
CHC44_RS09100 NONE
CHC44_RS09105 NONE
CHC44_RS09110 NONE
        pspE 1754188 .. 1754204 + -10.8  -3.80018   TACTCATACTAACCG              CGGCGC TTAAT GCGCCG              TTGTTGATCTCTCCG  85 57
CHC44_RS09120 NONE
CHC44_RS09125 1756770 .. 1756804 +  -4.9  -3.40674   AAATGACCTTCCACA    GGGCGCTGATTGCCTG GCTT TACGCCG-CAGCGCCC     GTTTTTCCGTCATGC  54 35
CHC44_RS09130 1758457 .. 1758480 + -12.5  -3.28712   AAGAGTAGAAAAAAA          GAAGGCCTC CGGATA GAGGCCTTC           TTGTGACAAAAGAGC  90 33
CHC44_RS09140 1760373 .. 1760417 +  -2.8  -3.69354   CGTGAAAAGAGACGA CCCAGGCGGGTTG-GAGTCGA TGAA TTAACTGGCAAAGCGCCTGGG TTTCCGGTTCTGAGC  51 272
CHC44_RS09150 1762707 .. 1762725 +  -2.3  -3.55889   GGCATGGGGATTAAG            CGAGCGCC TGAT GCCGC-CG             TTCTCATTGCTGTGT  47 100
CHC44_RS09160 1764927 .. 1764949 +  -2.6  -3.60805   TTTGCTCTTATCATG           GCGTCTTTAC GAC GAAAGGGTGC           TTTAGCGTGGAATAT  50 270
CHC44_RS09165 1765870 .. 1765896 + -10.9  -2.92026   GAACAGCTTCTAACA         CGGTTGCCG GAGCGTAGA CGGCAACCG         TATGATATTCGCCTG  75 70
CHC44_RS09175 1767369 .. 1767381 +  -5.5  -3.06915   CCTAATCATCCATCT                TGCCG TTG CGGTA                TTCGGTAAAGTACAT  52 97
CHC44_RS09180 1767687 .. 1767708 +  -5.1  -2.92475   GCAGTTGGGAGGCCG           TGTCCAGTA TGGG TACCGGACG            GTTTCTGGGCCTGAA  50 50
CHC44_RS09195 1771360 .. 1771372 +  -5.5  -3.36878   GAATAAACGCGCTAT                CCGTC GCT GATGG                TTATCGCTAAATAAA  56 16
CHC44_RS09200 NONE
CHC44_RS09205 1774348 .. 1774370 +  -4.2   -3.8211   TGGATGTTCACTTGG           TTTTTTAGCG GAT TGCTAAATAA           TTATTATGGCTAAAA  55 96
CHC44_RS09210 1775006 .. 1775017 +  -4.4  -3.91597   GCAGGCATTCTCTTG                TGTG CCCC CACA                 TTTAATATATATACT  59 98
CHC44_RS09225 1776775 .. 1776816 + -13.1  -5.18371   CGTCATCCGGACAGG GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTGTCGCA 100 63
CHC44_RS09235 1778475 .. 1778485 +  -6.8  -3.04248   GGTCGCAGCGCAGAT                 GGTC AAT GACC                 TGTTCGGCCGTGTTC  54 157
        smrA NONE
CHC44_RS09260 1781930 .. 1781943 +  -6.7  -3.09785   GGAGAAACAGTCATT               CGCTT ATTT AAGCG                TCTATTAAAATATAC  58 15
CHC44_RS09265 1783363 .. 1783381 +  -7.4  -5.03145   ATACATGTTTGGTAA             GCGCCT GTTGCTA AGGCGC             TTTTTTCGCACGTTC  86 43
CHC44_RS09270 1784664 .. 1784683 +  -7.1  -5.83822   ATTGATTCGTACGAC            GCCGGCT TAGATT AGTCGGC             TTTTTTTTGCCTGTA 100 215
CHC44_RS09275 NONE
CHC44_RS09280 1786339 .. 1786376 + -13.5  -3.00106   TATTAAAATGATCGA   TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG   ATTATTTCACTTCGA  87 30
CHC44_RS09295 NONE
CHC44_RS09300 1788023 .. 1788052 +  -9.3  -2.62613   GCGATGATGATTGAT       TTGAGCCCGCA CTCTCTTA TGCGGGCTCGG        GTATTTAGCGTACCA  66 41
CHC44_RS09310 1788918 .. 1788937 + -13.6  -5.95539   CGTATAAATTGACAA            GCCCGAAC GAAT GTTCGGGC             TTTTTTTGTTTCCAG 100 29
CHC44_RS09325 1793350 .. 1793363 +  -3.7  -4.24002   GCCAAAGCTGAGCTC               CGGGC CGGT GACCG                TTTTACCGTTTACGC  64 336
CHC44_RS09340 NONE
CHC44_RS09345 NONE
CHC44_RS09350 1798049 .. 1798061 +  -4.1  -3.75153   TGGGTAATTTTTGAA                TACGG AGG TCGTA                TTTACATTAGGCGAA  55 83
CHC44_RS09355 1798759 .. 1798786 +  -5.6  -3.60792   TGTCTTTATGGATAC       CGCCGCGGCTGG AGAGAA CCA-CCGCG-CG        TTTGCCGGTTACCAG  55 201
CHC44_RS09365 1803296 .. 1803307 +  -3.6  -3.53811   CGGCCTAAAAAGCCA                GGCG ACGA CGTC                 TTTCAAAGCGATCCG  50 33
CHC44_RS09370 NONE
CHC44_RS09375 1804801 .. 1804814 +  -3.8  -3.86897   GTAAGCGTGACTGAG               CGTC CTGCAT GACG                TTTGTCGCAGGTGGG  57 27
CHC44_RS09410 1812401 .. 1812416 +  -5.4  -3.84514   TTAGTTTTTAACAGG              GCATTG TGAG CGATGC               TTTCATCCTTAAGCT  61 444
CHC44_RS09420 1814850 .. 1814890 +    -3  -3.45849   TTATAAGCGGTGGAT TTTTATATTGTGTGTAATT TTAC AATTACATA-AACATAAAA  TTCTGATAGTATACC  48 404
CHC44_RS09425 NONE
CHC44_RS09430 1816360 .. 1816384 + -15.7   -4.5538   CGATAACTGATTCAT          CCGCCAGCGGA TTT TCCGCTGGCGC          TTTTCTGAATTTTCT 100 31
CHC44_RS09440 1818156 .. 1818187 + -16.6  -4.30719   TCCTTTAGTAAGCGT      CGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCG      TTTATTCTCCGACAG 100 33
CHC44_RS09450 1820778 .. 1820796 +  -3.8  -2.62184   CTTTAAAAGCGGTAA             GCTTCACA GGC TGTGAGGA             TACTGTAAAAGGAAG  44 35
CHC44_RS09455 1822365 .. 1822377 +  -5.5  -3.79906   GCGTGAGGTTTACAT                CCGAT TCG GTCGG                TTCTTATCGACATAA  61 65
        mdoD 1824186 .. 1824196 +  -3.2  -3.37935   CGTTATGTCGACGAT                 CGTA TCA TGCG                 TTAGTCATTTTGCCT  48 11
CHC44_RS09465 NONE
CHC44_RS09470 1826192 .. 1826212 + -15.5   -4.4084   CCCCAGTAATATAAA            GGTCGGGTA CTA TACCCGACC            TTTTCCTGTATGATT 100 32
CHC44_RS09525 NONE
CHC44_RS09530 1835758 .. 1835775 +  -2.7  -2.78863   CATTTTTAGTGCATC             CAGAATG ATTT CGTTTTG              CTATTATTTCCTTTG  41 118
CHC44_RS09535 1836837 .. 1836892 +  -3.9  -3.55444   AAGTAAATAAAAAAC GCCTGCGGCGGCG-GCCGCTAACCAGCG ACG CGTTGGATCGGGGTGCGC-GTC-CGGGC TTTGACAAATGGCGG  51 373
CHC44_RS09545 1838355 .. 1838366 +    -3  -2.72211   CACGTGATTAAGCGG                GAAA ACTA TTTC                 GTTAGTTTGCGCTTC  41 30
CHC44_RS09550 1840443 .. 1840461 +  -5.2  -2.78813   TGCCAGTTGTGGTGC             TCGCGCAA GCC TTCCGCGG             ATTCTTCCGCTGCCG  47 75
CHC44_RS09565 1842788 .. 1842803 +    -6  -3.15996   CACGCCCGTGATCCG              CCGCTG CAAC CTGCGG               TCTTACTGAATAATG  57 30
CHC44_RS09570 1843237 .. 1843247 +  -8.2  -2.86391   TAACCATCTGTTTAA                 GCGG TGT CCGC                 TAATCTTTACCTGCT  61 216
CHC44_RS09575 1844132 .. 1844149 +  -3.5  -4.10161   AAAGCACCATAACAG             TTAGCAA ATCA TTGTTAA              TTTTAACAACTGATA  57 82
CHC44_RS09580 1845675 .. 1845705 +  -6.1  -3.53855   CCTGACTAAATTTCC      CGAGTGTGCCGGGT GAGC ATCTGGCGCGC-CG       TCTATTTTTAGGAAA  60 65
        patD NONE
CHC44_RS09595 1847770 .. 1847798 +  -5.2  -4.57073   TTCGCTTTTCTGACC        TCAAGCCCGATA CAGGT TACCGGGCATGG        TTTTTCCGCCAGGTC  71 28
CHC44_RS09615 1855183 .. 1855196 +  -4.5  -3.14051   TGGTTCATCAGCAGG               CGTCCG GCG CGG-CG               TGTTCATCAAGCTGG  50 487
CHC44_RS09630 1857211 .. 1857231 +  -7.6     -2.55   CTTTTTTACAATTAA            GTTCCGAA AATTC TTCGGGAC            TCGATTGCGATGTTG  57 297
CHC44_RS09635 1857966 .. 1857980 + -12.8  -3.04515   TATGACTTATCAATA               GCGGGG ATT CCCCGC               TATTGCCGGATATTT  83 53
CHC44_RS09645 1861458 .. 1861479 + -10.1  -2.80821   CTCTGTAAATAGGGT           ATGGAGGGG GAAA CCCCTCCAG            TCATCTCTTTAAACG  71 33
CHC44_RS09650 1861824 .. 1861834 +  -2.4  -3.01712   CTGACTAAGCATTGG                 GCGC GAT GCGG                 TGTTGGCGGCAACGC  42 33
        steA 1864685 .. 1864699 +  -5.7  -4.79949   ACGTACCTCCGGCGC               GACAG CCGGC CTGTC               TTATTTTTTTCAAAA  76 179
CHC44_RS09670 1865899 .. 1865909 +  -2.4  -3.66178   GCCATGCACCCATCG                 GGCC ATT GGCG                 TTTCCCGTTACCGGA  50 264
CHC44_RS09700 1873669 .. 1873679 +  -2.4  -3.69354   GCCTGCTCATCGCTC                 CCGC CGC GCAG                 TTTGACGTTGTAGAG  50 241
CHC44_RS09715 1877684 .. 1877698 +  -4.2  -2.82742   CAACGACCAGTGAAC               GTCTGC ACG GCATAC               TCCTTATGACCGAGT  45 483
CHC44_RS09730 1879112 .. 1879128 +  -3.7  -3.88946   TTTATGGTTTTATTT              TTGGTAG TAA CTACTGA              TTATTATATGCACTA  57 9
CHC44_RS09740 NONE
        fdnG NONE
        fdxH NONE
CHC44_RS09755 1885162 .. 1885187 + -14.1  -4.38171   TCGCGATCTGATAAA         CAAGGCGCTAT CCTC GTAGCGCCTTG          TTTTCATCTGCTGTC 100 46
CHC44_RS09780 1889913 .. 1889933 + -13.3  -3.27951   CTATCACCTCAACGC            GCCGTAGAC CAC GTCTGCGGC            TATTGTCGTGGCCTA  95 139
CHC44_RS09785 1890498 .. 1890515 +  -6.2  -4.53036   AAACTGATATCAAAA             CCCGGC CTGTGT GTCGGG              TTTTACTATTTGTGA  76 45
CHC44_RS09790 1891477 .. 1891487 +    -4  -3.24926   CGTAAAAATTAGCCC                 CATA GTC TATG                 CTTGTTTTTCGGATG  48 96
        treZ NONE
        treY NONE
        glgX 1898002 .. 1898018 + -10.8  -5.52384   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTTACTGGCGC 100 51
CHC44_RS09825 1903840 .. 1903852 +  -2.7  -4.19472   TTCCCCGGTTGCTGC                TTTGA CCG TCAGA                TTTTCCAGTGTATTG  58 234
CHC44_RS09850 1905630 .. 1905644 +  -4.2   -3.3334   GAACGCGTCATTGAG               GTCAAC ATT GATGAC               TTATAAGCTGGCATT  50 5
CHC44_RS09855 1906036 .. 1906050 +  -2.8  -4.63218   CTATGGCCTACGTTG               TGTATG TGA CATTCA               TTTTATTCCCGCCCG  65 137
CHC44_RS09860 1906498 .. 1906529 + -12.6  -4.72497   GATGCTTATTCTCGG      TAAAACCGGTAGCAT TAT ATG-TACCGGTTTTA      TTTTATTCATCCCTG 100 39
CHC44_RS09875 NONE
CHC44_RS09880 NONE
CHC44_RS09885 1912736 .. 1912767 +  -8.8  -2.63715   GTATGATTTTAAAGA      ACTTTATCCATCGC ACTT GCGATGGATAAAAA       TCCTCTGCGATAAAT  63 55
CHC44_RS09890 NONE
CHC44_RS09895 1915184 .. 1915211 + -13.5  -3.90744   ATTTACGGCGAGTTC        TACCGCATGGC ATATCC GCCATGCGGTG         TTATTTACCGACAAA 100 40
CHC44_RS09910 NONE
CHC44_RS09915 NONE
        cybH NONE
        hybD NONE
        hypC NONE
CHC44_RS09935 NONE
CHC44_RS09940 NONE
CHC44_RS09945 NONE
        hypA 1924987 .. 1925000 +  -6.7  -4.11751   TCTGTATTAGGATTC               GATGG GTTG CCATC                TTTTAGCAGATTGAT  70 207
CHC44_RS09960 1927330 .. 1927356 +    -8  -3.06183   TTTGCTCTTCAGGTT         ATGGCGCAGA TGAACAT TCTGCGCCAG         TTAAGTCGAGCTCAG  62 43
CHC44_RS09985 NONE
CHC44_RS09990 1933973 .. 1933987 +  -4.2  -3.40403   TTGCTTTTCGCTTCC               GGCG ACTCATG CGCC               TTCTGCTGCGGGAAA  51 433
CHC44_RS10000 NONE
CHC44_RS10005 NONE
CHC44_RS10010 1935624 .. 1935642 + -12.4  -5.52986   CACCTTTAACCTCTT             TGCCCCGT TTT GCGGGGCA             TTTTTTTAGTACCGT 100 32
CHC44_RS10020 1938065 .. 1938079 +  -3.5  -3.85698   TTAATTATCTGCAGC               CAGTG ATGTG CGCTG               TTTCTGGCGCACCGG  53 37
CHC44_RS10025 NONE
CHC44_RS24105 1939033 .. 1939054 +  -2.1  -5.52384   CATCCTCAATAGCAT           GAGGCGGCG GCGG TGCCACGTC            TTTTTTTAATCCCCC  85 480
CHC44_RS10035 1940236 .. 1940254 +  -5.2  -5.03145   ATTTCCGTCCGCCAC             TGTGGCTA TTC TGGCCACC             TTTTTTACCCGCTTC  82 171
CHC44_RS10055 NONE
CHC44_RS10060 1944497 .. 1944507 +  -4.6  -3.41126   CCCCTTTAACGTCGG                 GGTG AGA CGCC                 TTCTCCGCTTTCTCA  52 42
        ydfZ 1944897 .. 1944919 + -17.8  -3.10245   AACCGCTCCGGCCTT           CCCGGTAGCA TAA TGCTACCGGG           TCTCTGTTGCGCTAC 100 58
CHC44_RS10095 NONE
CHC44_RS10100 1951757 .. 1951793 +  -7.3  -2.88023   CCACCGCGCAGTAAA   CGCGGCGCGGTAGTCAC GGAGA GTCGC-ACCGCGCC-CG   GTTTAGTAGTAATCG  59 27
CHC44_RS10110 1952963 .. 1952975 +  -6.3  -3.14132   AACGCTCTTTGACAT                GGATT AAT AATCC                TTACTCCCAAAGGGG  57 70
CHC44_RS10115 1955516 .. 1955531 +  -3.2  -4.56597   CGAAAAAATCTAAGC              CG-CCTG CTC CGGGACG              TTTTTACGCGCCCGG  64 28
CHC44_RS10120 NONE
        dmsB NONE
CHC44_RS10130 1959542 .. 1959559 + -12.7  -2.78349   CAGGTTAATTTATGC             GTGCGGG GCGA CCCGCAC              CTTTCGGGATTGTTT  82 33
CHC44_RS10135 1960203 .. 1960220 +  -8.4  -4.43859   TTAATCCCCACAAAA             GGCAGG ATTTTA CCTGCC              TTTTCTCCCATTGTG  84 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV 1963947 .. 1963975 + -12.4  -3.04443   AAGCAGCTAACGTTG        CCGCCGGATGGC CTCTC GCTATCCGGCAG        TATCATTATTGTACG  83 31
CHC44_RS10160 1965762 .. 1965773 +  -2.2   -4.4846   TTATAGGACAGCTAT                GC-GC GAC GCTGC                TTTCTTCTTCGCTTA  62 421
CHC44_RS10185 1969773 .. 1969805 + -11.3  -2.90496   GCCTGAAAAGAAATA      ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC      TGGTTTCACGCCACG  78 35
CHC44_RS10190 1970421 .. 1970439 +  -8.1  -4.57569   AGTCGTAACATGCTG            C-GGCGCG CCCC CGCGCCCG             TTTTTACGGCGCTAA  82 40
CHC44_RS10200 1971505 .. 1971525 + -12.6  -2.62263   GGACTAATACGCGAA            TCGCTGCC TGACC GGCAGCGA            TCGTCTCAGGCAAAT  81 34
        tqsA 1973718 .. 1973749 +  -6.4  -3.91897   GGCAAGGGAAGAAAT      CCCCGGGAGCATAG ATAA CGATGTGACCGGGG       TTTCTGAGTGCAGCC  66 82
CHC44_RS10235 1978272 .. 1978283 +  -5.8  -3.30124   TTCTCGCCGGATGGC                GGCA TACC TGCC                 TTATCAGGCCTACAC  56 62
CHC44_RS10240 1980280 .. 1980295 +  -6.8  -3.73224   TCAATACGACGACCA              GC-GCCC CCA GGGCAGC              TTTAATCACGAGTCC  62 389
CHC44_RS10250 1981210 .. 1981232 +  -9.1  -3.01712   CTTTATCAAGTCATA           GTGGCGATG CTCAT CACCGCCAC           TGTTCAAAAAACAGA  68 64
       ompS2 1982824 .. 1982842 + -17.4  -5.45813   ATTAATTCTTCTCAA             GCCCGCCG TTT CGGCGGGC             TTTTCTTTTTTCATC 100 47
CHC44_RS10265 1984695 .. 1984744 +   -10  -3.37761   AGCCTGCTTTTATAA C-CCACCAGCGGCGCTGACGGGAA ATCT TTTCCGCCAGCGCCGC-GATAGAG TTAATGTATTGAGAT  76 59
CHC44_RS10270 1986109 .. 1986124 +  -2.6  -3.25102   GAGCGGCGGGAACTG              TGCTAT ATAG ATAGTA               TGTTGTAACTAAAGT  45 60
CHC44_RS10275 1987162 .. 1987186 +  -8.5  -4.07535   GGTATCCTAATGCCA          CGGCTGAGGCT TTG AGCGTCAGCCC          TTCTTTATGCGCCTT  77 108
CHC44_RS10290 1991726 .. 1991747 +   -13  -4.38116   AGACGTAAAACTCCT           CCAGGCGG TTTAAT CCGCCTGG            TTTCATTTTTATGGA 100 83
CHC44_RS10295 1993312 .. 1993335 +  -5.2  -3.12352   GCGACGCTGCACCCG          GTCTGCGC CGAACGAC GCGCAGCC           TCTACTTTTGCGTTA  51 58
CHC44_RS10310 1995061 .. 1995096 +  -7.6  -3.06133   GAGAAATGCGACATC    TCAGGCAAGACACAGCG TCG CGCGATGTTTTGCC-GA    TTCCATGCCCAGTTC  60 100
         blr 1996641 .. 1996668 +  -6.2   -5.3472   ATATTCCCTTTTTAC        CTGCACCCCTGA CCTC TCACTGGTGCGG         TTTTGTTTATTTTTT  91 232
CHC44_RS10325 NONE
CHC44_RS10330 NONE
CHC44_RS10335 NONE
CHC44_RS10340 NONE
CHC44_RS10345 NONE
CHC44_RS10350 NONE
CHC44_RS10355 NONE
CHC44_RS10360 NONE
CHC44_RS10365 2004092 .. 2004105 +  -5.3  -3.80114   AAATTCTATCTATCC               GTGAT CAGG ATCAC                TTTGATAACTTCATG  59 192
CHC44_RS10370 2006055 .. 2006077 + -13.5  -6.17184   GGAAACAACATTCAG           GCCGCTAAC TGTGC GTTAGCGGC           TTTTTTTTTGCTCGT 100 48
CHC44_RS10375 2006752 .. 2006781 +  -6.4  -2.93708   AATTAATGTCATGTT       GCCGGATAGC TCGCTGTACC GCCATCCGGC        CTCTTTTTAGCAGCA  55 35
        slyB 2012411 .. 2012435 +  -3.6   -3.5774   CCAACGTGCGTACCA         GCGAT-GGC TGCTCAAT GCCTATCGC          TTTAGCCAATTGAAT  51 321
CHC44_RS10415 NONE
CHC44_RS10420 NONE
CHC44_RS10425 2015987 .. 2016007 +  -5.3   -4.3665   GGACATGTTATCGCC            GCCCACATG GAT CATGAGCGC            TTTATCTTTCACTTC  69 76
CHC44_RS10445 2018388 .. 2018407 +  -6.4  -5.41941   AGACCATCATTGCAA            CGCCTG AGCAGTAA CAGGCG             TTTTTATTTCCTTTC  91 12
CHC44_RS10450 2019567 .. 2019588 +  -7.3  -2.97058   CTGTAATTTCATTGA           TAGCGGC CTCACATC GCCGCTA            TACTTTGAATATCTT  59 35
CHC44_RS10455 2020039 .. 2020066 + -14.8   -4.2828   GGGTAACTGATCCCC        CGCCGGGCGCAG GTCA CTGCGCCCGTTG         TTTTACTGCATCCCG 100 31
CHC44_RS10460 NONE
CHC44_RS10465 2021165 .. 2021184 +  -7.9   -5.1101   CAGGAGAATCGGGTT            TTCAGCG ATCTGG CGCTGAA             TTTTTTCGATAGTGG  91 282
CHC44_RS10475 2022366 .. 2022394 + -13.3  -4.20868   ACAATTCGCTAATAT        TTTATCCTGTCGT TTA ACGACAGGATAAC        TTCTTCTTTTGCGCC 100 29
CHC44_RS10480 2023080 .. 2023101 + -14.5  -4.07885   GCATAAGTCTGAGTA           CGCAGAAGG TACG CCTTCTGCG            TTTTAGAGAGGGATA 100 35
CHC44_RS10495 2024655 .. 2024668 +  -4.5   -4.2558   GCAGCCATGCCAGCG               CG-GGC GAG GCCTCG               TTTTGCTGCCACGTC  66 117
CHC44_RS10505 2027009 .. 2027028 +  -7.1  -2.91276   ACGTCGGATAACTGG            CTCACGG AATTGC CCGTGGG             ATTTCTCACAAAGCC  59 224
CHC44_RS10510 2028253 .. 2028277 + -14.3  -3.72228   TTCCTCGCTAATCAT          CTCCCCCGCAT TTC ATGCGGGGGAA          TCTTATTTTCCGTTA 100 30
        mdtK 2030530 .. 2030549 +   -10  -4.39828   GCGATAATACGACGA            TAGCCGTC GCAT GGCGGCTA             TTTTCTCGACATGTT  87 34
CHC44_RS10525 NONE
CHC44_RS10530 2031252 .. 2031262 +  -6.8  -3.17392   ATAGCCAAGACAAAC                 CGCA ATA TGCG                 TTGGATTACGCACTA  56 441
CHC44_RS10685 NONE
CHC44_RS10690 2056472 .. 2056487 +  -3.2  -2.78438   ATGATATAGTAGAAT              CCCCTT ATTT AACGGG               CTTTACCATGTCGTA  43 181
CHC44_RS10695 NONE
CHC44_RS10700 2058812 .. 2058829 +  -7.7  -5.00616   ACGTTGTTCGTATTC             TGGTCTC TGGC GAGGCCA              TTTTTTCGAAACGCC  91 483
CHC44_RS10720 NONE
CHC44_RS10725 NONE
CHC44_RS10730 2066391 .. 2066404 +  -2.3  -2.73067   TCATTTGGGGTTACT               TCCGG TTGA CCGCA                TAATCTGTGATTGAA  40 263
CHC44_RS10735 NONE
CHC44_RS10740 NONE
CHC44_RS10745 NONE
CHC44_RS10750 2070801 .. 2070822 + -14.4  -3.28712   CCCGCTGTTGCGCAA           CGCCGCCC CTGTTC GGGCGGCG            TTATCGCCAGCGACA 100 58
CHC44_RS10760 2072615 .. 2072629 +  -8.5  -5.99154   AATTTGTTTAAAAAA               GCGCC CTTCC GGCGC               TTTTTTTATTTAATC 100 58
CHC44_RS10765 2073150 .. 2073168 + -14.6  -5.75342   CCTGCGTAATAAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTTACCCACA 100 46
CHC44_RS10770 2073474 .. 2073492 + -14.6  -5.64274   ACGCACGATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 45
CHC44_RS10810 2082221 .. 2082233 +  -6.2  -3.30124   GTAACATAGCCGGAT                GGCG GCTAA CGCC                TTATCCGGCCTACAC  59 277
CHC44_RS10830 2087393 .. 2087419 + -15.8  -3.56862   CAAGCAGTCATAATC         CCGTCGGGCGGC ATT GCCGCCCGATGC         TTTAGCGACGTTTAT 100 28
        rprA 2087802 .. 2087823 +  -9.5  -5.21709   GTCGAAACGGTGTCG           GTGGTGCTA TTTA TAGCATCAC            TTTTTTCATATAAAA 100 147
CHC44_RS10840 2088333 .. 2088343 +  -5.4  -2.62616   TGTTCAGGCGGCATC                 TCTG AGT CAGA                 TAATATGAAAAATCG  50 151
CHC44_RS10845 2089789 .. 2089805 +  -5.1  -3.34239   TCAATGCAATAAACC              TGGCATT TTA AACGCCA              TGTTATGTACATATA  54 258
CHC44_RS10850 NONE
CHC44_RS10855 NONE
CHC44_RS10860 2092960 .. 2092970 +    -4  -3.33696   GTTATCTGACATGAA                 TATG TTC CATA                 TTCATTAAAAGCCGC  50 91
CHC44_RS10865 NONE
CHC44_RS10870 2096103 .. 2096117 +  -3.6  -3.58037   AACATAGTTGATAGG               GGATAT ATG ATATTC               TTTGGCAAATTCATG  51 320
CHC44_RS10880 NONE
CHC44_RS10885 NONE
CHC44_RS10890 NONE
CHC44_RS10895 2100613 .. 2100626 +  -8.1  -3.68222   GAAACACCGGATAAC               GACGC TACG GCGTC                TTATTCGGCTTGCCC  69 47
CHC44_RS10900 2102326 .. 2102355 + -19.3  -3.08283   CTGCGGTATAAATTG       CCGGATGGCGACG TTAA CGCCGCCATCCGG        TATTACACTACTTCT 100 30
CHC44_RS10910 2105908 .. 2105919 +  -4.4  -3.80516   TAACCGCAGGATGTA                CTAG CAAA CTAG                 TTTAATGGGTTGGTT  58 22
CHC44_RS10915 2107119 .. 2107141 + -15.6  -4.21631   CCGCTTTTAATAGCT           CGCCCATCCT GCC GGGATGGGCG           TTTCTTCGATGCGTT 100 31
CHC44_RS10920 2107461 .. 2107496 +   -12  -2.52676   ACTGTTAACCAAATA   GCGCTG-CGCCAGCAG ACGATG CTGCTGGCGTCAG-GC    TAACTTGAACAACTG  79 25
CHC44_RS11005 2123264 .. 2123275 +  -5.8  -2.87344   TCGCGCTGACGATAA                CCGT TGAA ACGG                 TCTGTCAGCCAACTG  51 453
CHC44_RS11015 2124909 .. 2124924 + -11.8  -3.01791   AAAATCGGTTAACGG              GCGGCG CATC CGCCGC               TGTTAAAAACACAGT  81 70
CHC44_RS11020 2125275 .. 2125285 +  -4.6  -3.50466   CCGCCGCGGCGCGTC                 CGCG ATG TGCG                 TTAGTTCGTATTTTT  54 50
CHC44_RS11025 2126228 .. 2126250 + -12.1  -4.81851   TATAGGTACAGCCCA           TGCCGGATA CGGGC TATCCGGCA           TTTTTCAGTTTACAT 100 36
CHC44_RS11035 2127646 .. 2127670 +  -7.8  -3.53012   GTCAACGGGCAATTA         GCCGCTGAGCC AGAC GGCA-AGCGGC          TTTGACAGAGACAAA  67 58
CHC44_RS11040 2128374 .. 2128385 +  -4.4  -3.30038   CGCCAAAGTCATTTT                TGGT ATAA ACCA                 TTCCATTTGAATATA  52 49
CHC44_RS11045 2129942 .. 2129972 +  -9.8  -5.84381   AAAATGTCTGTCACT       AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG       TTTTTTTCTTAGTCA 100 89
CHC44_RS11055 2132931 .. 2132945 +  -2.8   -3.1211   AGAGGCATCCAGAAT               GCGT AAAAAGC ACGC               TTCGGTGATCTCCTC  43 264
        nadE 2139705 .. 2139731 +  -3.7   -2.7535   GTACTTCTACTGTTG         TGCCGGATA TCGCTCGTC TATCCGGCC         TCCTCTCTTCCCAGC  45 43
CHC44_RS11105 2140770 .. 2140783 +  -3.8  -4.36127   TGCGGAAAGTTATTC               TGCC GCAGCA GGCA                TTTTACCTTCTTGCG  64 106
CHC44_RS11150 NONE
CHC44_RS11155 2149512 .. 2149529 +  -4.1  -3.53012   ACATTCACCTGAATA             TCAGGAC GACT GTTCTGG              TTTGCCAGCCCGACC  51 184
CHC44_RS11165 2151215 .. 2151237 +  -7.6  -5.41143   TTATTCGGTCTGACG           GCCTGTCTCC TCA GCAGGCGGGC           TTTTTTTGCCCGCTC  95 70
CHC44_RS11195 2156913 .. 2156953 +  -8.3  -2.79276   GCTTCATCAATAGCC  ATACCGGATGGCGGC GTCTGCTCATA GCCGCCATCCGATAA  TCATTAATACGTCCT  64 42
CHC44_RS11200 NONE
CHC44_RS11205 2159173 .. 2159200 +  -3.3  -4.15514   TCGGTATTGTGCCGC        GCCTGCCATAG CATCAC CAGTTGCAGGC         TGTTTTCTTTCTGTT  58 507
CHC44_RS11220 2161139 .. 2161156 + -11.3  -5.95166   CACAGTCATTGGTAA             GAGCGAC TCAG GTCGCTC              TTTTTTTTGCTTAAA 100 51
CHC44_RS11230 2162369 .. 2162417 +  -3.1  -4.37886   CTATAGGATCTGAAA GGCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACACA TTTTATCCGGCGTCA  62 63
CHC44_RS11250 NONE
CHC44_RS11255 2169395 .. 2169419 + -12.9   -4.1673   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 33
CHC44_RS11265 NONE
CHC44_RS11270 2172275 .. 2172305 +  -2.5  -4.62069   CCTGTTAGCAATACG       CGGCGTTGATG GCAATTTAA TGACAACGCCG       TTTTTCACGTAGAGA  65 180
CHC44_RS11280 2172894 .. 2172915 + -17.3  -5.03715   CGCCCGTCAGATACT           GGCCTGGGG TCTG CCCCAGGCC            TTTTTTAAACATGGT 100 43
CHC44_RS11290 NONE
CHC44_RS11295 2175524 .. 2175536 + -10.5  -3.91716   CCGTGACCAGCCACA                GCGCC CGA GGCGC                TTCTTTCGGCAGTAA  80 148
CHC44_RS11310 2176402 .. 2176432 + -14.3  -2.90219   TAAATTCATTTTGAA       TAATAAAGGCTAC CTGTC GTAGCCTTTATTA       TCTCTGAAAGTTCTG  89 115
CHC44_RS11340 2178649 .. 2178673 +  -2.7  -4.18763   CAAATCCGACGAAAA          GAAGGCCAATC AAA GAATTGCCTAC          TTTTGCCAGTTTCTT  58 86
CHC44_RS11355 NONE
CHC44_RS11360 2180758 .. 2180783 + -11.1  -3.42407   TATGAAGGGTATAAA         CAAGGGAGGGG GTTA CTCCTCCCCTG          TTCATTAATAATGTA  81 233
CHC44_RS11400 2185871 .. 2185892 + -15.9  -2.52464   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 43
CHC44_RS11430 2191726 .. 2191743 + -14.1  -4.90296   CAATAACAACAGTAA             GCCGGCG ATGC CGCCGGC              TTTTTATCCCATTTT 100 35
CHC44_RS11435 2192403 .. 2192437 +  -7.8  -2.96444   AATCATGACTATTCG    GCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAAGC     ATTATTATTCCAGCG  61 33
CHC44_RS11460 2196067 .. 2196099 + -13.4  -3.05384   ACGATCACCGGCCAA      CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG      TTAAATCCCCAAGCC  86 295
        pagD 2198723 .. 2198743 +  -3.9  -4.47707   TCCGGAAATCTTGAT            TGCCATCAA ATA TAGCTGGCA            TTATTTTTCCTGACG  66 83
CHC44_RS11485 2199118 .. 2199128 +  -2.6   -4.3129   TCAGTGGCGAAAATC                 TAAA AGA TTTA                 TTTTGCTAATGACTC  60 134
CHC44_RS11490 2200134 .. 2200151 +  -4.9  -3.85698   GTAAAAAGGAAATGG             CGATGTTC GTC GAAC-TCG             TTTATGACAAGCGAA  59 214
        msgA 2200413 .. 2200430 + -12.7  -2.89191   ATGTCCGATCGAAAA             CAGCGCC CTGA GGCGCTG              TCTGTGACGATATAA  82 63
CHC44_RS11500 2201727 .. 2201739 +  -3.3  -4.04174   GGCACTGCTTGAAGA                CAGCG AAT CGCTA                TTTCATTCTCTGACA  57 99
CHC44_RS11505 2202460 .. 2202474 +  -3.5  -3.44527   CATTTTAAGTGAAAA              GCAGCC AGCA GGC-GC               TTCTGCTGGTCCATA  49 304
CHC44_RS11525 NONE
CHC44_RS11530 NONE
CHC44_RS11535 NONE
        mnmA 2208283 .. 2208332 +  -2.8  -4.93877   GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA  70 34
CHC44_RS11545 NONE
CHC44_RS11550 2210385 .. 2210413 + -12.6   -2.7955   TAAATAATGTCTGCC        TCACCCTCTTTT CTTCA GAAAGAGGGTGA        CTATTTGTCTGGTTT  82 34
        phoP NONE
        phoQ 2212645 .. 2212662 +  -2.6  -2.90723   AGGAATAAACATTTC             TGCGCG TTCTTC CACGCA              TCTCGTTAAGCATCC  42 33
CHC44_RS11565 2214169 .. 2214184 + -10.4  -4.34263   ACAACACCATGGATA              CGTCGG ACTG CCGACG               TTTATATTCTTCCAG  90 355
CHC44_RS11585 NONE
CHC44_RS11590 2218892 .. 2218902 +  -5.4  -3.41023   CTCTCAGGTTTTATA                 CTGA TTG TCAG                 TCTCTTTTAAAAATT  56 237
        sifA 2220201 .. 2220214 +  -6.7  -2.83867   TAAAATTCGCGGCTT               CAAGC GGCA GCTTG                CTTCTTCCTGGCTGC  56 207
CHC44_RS11600 2221104 .. 2221120 +    -5  -2.71011   CTCGTGATAAAACCA              AGGGCC GATAA GGCCCG              TAATTCAGGGGACGT  49 15
CHC44_RS11605 2222348 .. 2222358 +  -4.6  -3.06831   CTCTTCAAACTCGCT                 GCCG ACC TGGC                 TTGGCTCAAGATTCA  47 188
CHC44_RS11635 2230975 .. 2231003 + -10.3  -2.85069   ATTGCATAAGCGTCA       GGCCGGGCGTCA TTACTC TG-CGTCCGGCC        TAATCTTTACAAATT  72 32
CHC44_RS11640 2232101 .. 2232134 + -12.5  -5.18726   GAATAGCTGACCGAC     AAAAAAGCCTCGCGA TGCA TCGCGAGGCTTTCTC      TTTTTATTGTGGCAA 100 45
CHC44_RS11650 2233337 .. 2233363 +  -7.9  -2.52896   CTTCGGATAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC  59 50
CHC44_RS11695 2242015 .. 2242032 + -12.7  -3.44146   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC  93 66
CHC44_RS11770 2255374 .. 2255388 +   -10  -4.13945   CTACAGCAATAAACG               GCCTAC TCT GTAGGC               TTTTCAAATACCGCT  82 29
CHC44_RS11795 2261523 .. 2261540 + -12.7  -5.25803   AAATGCTGATACAAA             GCCGACC GCCA GGTCGGC              TTTTTTATGCCCCTT 100 44
CHC44_RS11800 2262031 .. 2262043 +  -4.7  -5.26119   ATTGGTTTTATCAAT                GGCGG CAG CGGCC                TTTTCTTTTTCCACG  85 315
        flgA NONE
CHC44_RS11870 NONE
CHC44_RS11875 2273288 .. 2273315 + -10.7  -2.64472   CCTGAATGCCTTGTA        G-GCCTGATAGC ACAGC GCTATCAGGCAC        TGAATTTACGCCGTC  74 74
CHC44_RS11900 2278774 .. 2278796 +  -5.4  -2.86492   AAACGCACGCCGCGC           CGGATGCTGG AAC CCGGCGCCTG           ATTTGATACCTGTCG  51 2
        grxB 2279518 .. 2279540 + -10.6   -4.7657   ATCTAACGCCCGCCA           GGCGGCAA CCCTTTC TTGCCGCC           TTTTTCAGCTTTTTC  95 35
CHC44_RS11910 2280201 .. 2280216 + -11.8  -5.47218   CCAATTGATTTCGGA              GGGCGC GCTC GCGCCC               TTTTTTTACGTGCAA 100 33
CHC44_RS11915 NONE
CHC44_RS11920 2281689 .. 2281704 + -11.8  -5.63517   CAGTGATGTATGTTT              GCCGGG TCGC CCCGGC               TTTTTTATTTGCGCA 100 52
        bssS 2282230 .. 2282245 + -10.4  -2.73799   GCTCCCCCTCTCTCA              GGCACC GTAA GGTGCC               TCACTTATTTCTGGC  71 49
CHC44_RS11930 2283443 .. 2283461 +  -9.5   -4.1822   TAGCCAATAATTTGT             CGGCCCC GTAAA GGGGCTG             TTTATTAAGGTAAGC  84 31
CHC44_RS11935 2283682 .. 2283692 +  -4.6  -3.28791   TAATGCCAGTTCCTG                 CCGT TGC GCGG                 TTATCAGGGGGAAAT  49 116
CHC44_RS11945 NONE
CHC44_RS11950 2285008 .. 2285047 +  -8.5  -3.13403   AAGTAACGCCTGGCG  AAATGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCAAAA   TATTACTCAGCCGGA  67 35
CHC44_RS11960 2287248 .. 2287267 + -12.2  -4.69464   GCGCTATTAACAGGA            TTGCAGCC GTCA GGCTGCAA             TTTTTCCCCTCTTTT 100 31
CHC44_RS11970 NONE
CHC44_RS11975 2289321 .. 2289339 + -10.3  -4.62783   ATTTCACTATAAAAA             TACCGGC ATCAC GCCGGTA             TTTTTCACCTCACTC  91 279
CHC44_RS11995 2294927 .. 2294957 +  -8.2  -4.42464   CCGCCAACCGTACCA       GAACTCGCTGCCAG AAA CGTGTAGCGGGTTC       TTTCTTTAACACCTT  83 86
CHC44_RS12030 2299339 .. 2299352 +  -2.5  -5.24799   GAAAACAGTTAAAAG               TATTT TCGT AAATA                TTTTTCTCTTTCTGG  76 472
CHC44_RS12035 NONE
CHC44_RS12040 NONE
CHC44_RS12045 NONE
CHC44_RS12050 2301845 .. 2301865 +   -14  -5.54907   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTATTTTGTGAC 100 39
CHC44_RS12075 2304943 .. 2304958 +  -4.8  -3.35813   GTTTGTATAAACGCG              CTTTTT TTTA AAAAAG               TTGATTGACGTAGAA  54 15
CHC44_RS12080 2305128 .. 2305147 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
CHC44_RS12085 2305312 .. 2305331 +   -10  -4.96646   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGG  93 40
CHC44_RS12090 2305496 .. 2305515 +   -10  -5.48303   CATATTTAAGAAAGA            GCTCGTAC GAAT GTACGGGC             TTTTTTTCGCATTAT 100 39
CHC44_RS12115 2311488 .. 2311502 +  -7.1  -3.54129   GGCAAATACGATACT               CAGGC CTGAA GCCTG               TTTGAACGCAATATC  65 116
CHC44_RS12125 2313381 .. 2313418 +  -4.3  -3.90707   GTCATAAGTTGGCAA   CGCGATGTAAATA TTCCCCCTCCTT TACTTACATCGCG    CTTTTTTTCATGCCG  59 184
CHC44_RS12130 2314489 .. 2314499 +  -5.4  -2.91264   GCTCTGAAAGTCAAT                 GCTA TAT TAGC                 TGTATGCGTGAAGCG  51 125
CHC44_RS12150 NONE
        putA 2322086 .. 2322103 +  -9.1   -4.7373   ACTGTGGTTAATTAA             GGCTCCG TCAA TGGAGCC              TTTTTACTCGCGTCA  90 42
CHC44_RS12160 2322718 .. 2322735 +  -3.4  -4.84527   CCCGCTGTGCACCCA             TCCG-GC AATCA GCGCGGA             TTTTTCATCTATCAA  74 220
CHC44_RS12175 NONE
CHC44_RS12180 2324689 .. 2324727 +  -8.1  -4.09511   GAACGTAAAAACGTA  TAACACAAACGCCCCCGC CTGC GCGGGGGCATATG-GCTA   TTTTGCAGCAGTGTT  74 23
CHC44_RS12210 NONE
CHC44_RS12215 NONE
CHC44_RS12220 2330994 .. 2331021 + -14.9  -2.78679   GATAAAGGCAATAAA        CCGAGGGTGGGC TTTCT GCCCACCC-CGG        ATTTACATGCACCCG  89 46
CHC44_RS12230 2332351 .. 2332373 + -17.8  -2.64803   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC 100 387
CHC44_RS24125 2337614 .. 2337630 +  -3.5  -4.12456   CTGACGGCTCTCCAG              GCTGCGC CCG GCGCCGA              TTTTCAGCGTCATAT  60 151
        hpaR NONE
        hpaB NONE
        hpaC 2344547 .. 2344579 +   -12  -2.50443   GAAGATTTTTATTCC      CGCCGCGATGTTTG CTCGC CATAAATCGCGGCG      ATTAATACAATCTAA  71 100
CHC44_RS12305 NONE
CHC44_RS12310 2347419 .. 2347432 +  -6.7  -3.35798   TGTTCCCCTTCCCTG               CCACA GGGC TGTGG                TTATCAATACAACCT  61 56
CHC44_RS12315 NONE
CHC44_RS12320 2349695 .. 2349707 +  -7.7  -3.15503   TCACATCCTTTTAAA                GGGTT GTT AACCC                TGTTGAATGTTCCCA  64 471
        sopB NONE
        sigE 2351914 .. 2351932 +  -2.4  -4.84527   TCCTCTTTCTCATTT             TGCTCT GTTTGCG GGAGCA             TTTTTAGTGTGTAAG  72 144
        pipB 2353411 .. 2353427 +  -3.1  -3.31188   CTAAAAACACTATTA              TTGTTTA ATT TAAATAA              TTCATAATTGTAGTC  48 200
        pipA 2354243 .. 2354264 + -14.5  -4.04806   CGCCCAAAAAACAAA           GGGGTTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG 100 130
CHC44_RS12360 2355436 .. 2355453 + -12.7   -5.0917   CATTCCCCTCTTCCA             GCCCTGC TTAT GCAGGGC              TTTATTTTTTGCTAC 100 45
CHC44_RS12365 2355905 .. 2355921 +  -7.9  -3.55801   TTGTCCACACGAGCA              GAGCGCG GCC CGCCCTC              TTTCAGCCACTTGAT  62 98
CHC44_RS12385 NONE
CHC44_RS12390 2359318 .. 2359355 +  -8.5  -4.86731   TACGTAACTGATTGT   ATTTAAAAGGCCGGAAA GCGA TATCCGGCCATTTAAAC    TTTTATTTCGCCAGC  89 30
CHC44_RS12400 2360582 .. 2360601 +  -7.8  -3.21288   ATCATTTTCTGCAAT            GGGCGG AAAAACAG CCGCCC             TCTTGATATGAGTTG  64 0
        mgsA 2361167 .. 2361193 + -15.8  -2.76737   CTGAAATAACCGCTA         CGCGGGCGGGAT GCT GTACCGCCCGCG         CTTTAGGGCTTCCTC 100 32
CHC44_RS12415 NONE
        yccS 2366008 .. 2366043 + -14.1  -2.55351   GCGAATGAGCCCAGT   CGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCG    CTTCATGTACGCCGA  81 41
CHC44_RS12430 2367380 .. 2367413 +  -5.4  -4.80882   TGCTAACGTTTTTTT     TTGCG-AGAACGCTT GTCAG AAGCGGTTTCCGCAA     TTTTTGCTGTACGAT  76 95
CHC44_RS12435 2368740 .. 2368754 + -12.8  -5.23316   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 45
CHC44_RS12445 2371181 .. 2371195 +  -5.7  -2.77895   GCTGAACGCTTTTAT               TCCGA ACTGA TCGGA               CTTGTTCAGCGTACA  50 16
CHC44_RS12450 2371833 .. 2371857 + -18.7  -4.82901   AAAGCCCATAAAGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTCTAAAGAGAC 100 81
CHC44_RS12485 2381325 .. 2381335 +  -2.4  -4.00348   TTCAATACCAACTCC                 GCGC GTT GCTC                 TTTGGTTAATTCGAA  54 341
        pncB 2387025 .. 2387051 + -12.3  -3.41745   TTAACCATGCCTGTG         CGAAGCGCCCG GAAAG TGGGCGCTTTG         TTACTCTTCTGACCA  90 37
CHC44_RS12525 2390806 .. 2390825 +  -5.7   -4.6526   CCTAAATTCTCAATG            GTTCGCG AGCAGG TGCGAAC             TTTTTACAGGTTTCT  74 65
CHC44_RS12530 2392386 .. 2392402 + -13.7  -5.78622   TTACGTCACACTCAA              GGCCAGC TAT GCTGGCC              TTTTTTTTCGCCTGA 100 44
        ompF 2394098 .. 2394113 +    -9  -5.77988   TTTATGCCTCAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATCTCTCT 100 58
CHC44_RS12540 2395465 .. 2395495 + -14.2  -3.50853   GACTGGCGTGACCGA       TAAAAAAGCCTGCA ATG TGCAGGCTTTTTCA       TTCTGCTTACCAGAC 100 50
CHC44_RS12585 2407581 .. 2407605 +    -7  -3.36991   CCCGGGGCCGACCAT          CGCCAGAAGC TGATC GCTACGGGCG          TCTTTAAGCATACTG  58 251
CHC44_RS12660 2425201 .. 2425221 + -10.4  -5.26247   GGCTGCGTTATATTA           CGGGG-CGC CTTT GCGGCCCCG            TTTTATTTATTTTCG 100 77
CHC44_RS12665 2426449 .. 2426466 +    -2   -3.1247   AGTAAATAAAAAATC             CACTTA AGAAGG TAGGTG              TTACATGTCCGAGCT  42 63
        pflB 2428795 .. 2428814 +  -7.8  -4.79667   AAAGCGTACAAAAAA            GGCTCCAT ATCA GTGGGGCC             TTTTTAATGACTTTT  86 67
CHC44_RS12680 NONE
        pflA 2431189 .. 2431210 + -11.6  -4.39568   TTATCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGGT  93 53
CHC44_RS12740 2447557 .. 2447570 +  -3.9  -3.08471   TCGTTATGCTCTTTT               TTTAC GTCT GTAAA                TTCCCTACAATTCTG  47 308
CHC44_RS12745 2448616 .. 2448632 + -12.3  -4.89063   AACAAAAGTAAAAAA              GGCGACT ATA AGTCGCC              TTTATTTTTGCGTCG 100 56
CHC44_RS12750 NONE
CHC44_RS12755 NONE
CHC44_RS12760 NONE
CHC44_RS12765 NONE
CHC44_RS12770 2453503 .. 2453519 + -10.1  -5.10497   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  93 62
CHC44_RS12780 NONE
CHC44_RS12785 2456141 .. 2456164 + -13.2  -3.69364   CAGCGCTAATTTGCC          TCCCCGCGCCA GTT TGG-GCGGGGA          TTATGTCTATTGCAT 100 32
CHC44_RS12790 2456384 .. 2456403 +   -10  -5.47399   CATATTTAAGAAAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTTCGCATTAC 100 39
        cspD 2459768 .. 2459788 + -12.6  -5.27335   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 62
CHC44_RS12825 2464276 .. 2464290 +  -4.2  -3.95324   CAGCGCAGGCAGCGC               CGTGAG ATG TTCGCG               TTCTTCTTCCCGATC  60 283
CHC44_RS12840 NONE
CHC44_RS12845 NONE
CHC44_RS12850 2469571 .. 2469599 +   -11   -2.7464   AAACGTTCCATCATA       GGCCCGGTAAGCG TCAG CGCT-ACCGGGCG        ATTTGCCGCTCGCTT  74 46
CHC44_RS12855 NONE
CHC44_RS12860 NONE
CHC44_RS12865 NONE
CHC44_RS12890 2477964 .. 2477986 + -11.4  -4.06182   ATTACTATGCTATCA           GGGTGGTTTA ATC TAAATCACCC           TATTTTTATGGATAC  91 67
CHC44_RS12895 2478444 .. 2478458 +  -8.5  -2.89921   CAGCCATCAGTAAGG               GGCGC TCCGT GCGCC               TCTATACGGCTTCAT  65 46
CHC44_RS12910 NONE
CHC44_RS12915 NONE
CHC44_RS12920 NONE
CHC44_RS12925 NONE
CHC44_RS12930 2484961 .. 2484973 +    -2  -5.00616   AAGCGGAATAAGGCG                TTCA CTTGC TGAA                TTTTTTACCGCACCA  74 508
CHC44_RS12940 2487517 .. 2487529 +  -4.8  -4.11692   CACCCCGCCGGACAT                TCGC CAACC GCGA                TTTTCCAGCTCAATG  62 475
CHC44_RS12955 2488898 .. 2488928 +  -7.7  -3.97709   CCATAACCCCGTAAA      TTGTCTGGCATTCT GCAC GGGATGCC-GACAA       TTCTTCTTACCTACT  72 66
CHC44_RS12960 NONE
CHC44_RS12965 NONE
CHC44_RS12970 NONE
        artM 2492047 .. 2492073 + -10.9  -5.68039   ATTTTGAATAAATCT         GACGGACAAGT GGTTA ACCTGTCCGTC         TTTTTTTATCCATTT 100 118
CHC44_RS12980 2493158 .. 2493178 +  -3.9  -4.93877   AGACCCAGACGGCGA            TACTGCTCC GCC GGAGCATCA            TTTTCTTTCATCAAA  75 261
CHC44_RS13055 2505785 .. 2505821 +  -7.1  -5.41143   CTTTTCGCCTGATTG    CTCTGGCAACGCCCTCT GAC GGAGGGCGCTATCGGCG    TTTTTTTCGCCGGTG  95 29
CHC44_RS13065 2508374 .. 2508384 +  -8.2  -3.09933   TAAAATCGCTTCACG                 CGCC AGC GGCG                 TTCGATCCGTTACAA  60 253
CHC44_RS13075 NONE
CHC44_RS13080 2511238 .. 2511251 +  -4.5  -3.48105   ATAGCCCATTGCCGC               CGCTT AACC AGGCG                TGTTTACTGACTTCA  52 189
CHC44_RS13090 2513304 .. 2513332 + -14.7  -3.70902   AAAAAAGAGTAATAT        TAAGCGCTCTGTA TGG TGCGGAGCGCTTA        TTTAACTCTCCAGGG 100 48
CHC44_RS13095 2514109 .. 2514154 +  -5.6  -4.07568   ATTACTCTGATGTAT TAACCGCAGGTTTGCCGGATGCG ACG CGCACCCGGCAA---TGGGGTTA TTTTACGAGAACCAA  65 23
CHC44_RS13105 2516652 .. 2516662 +  -4.6  -3.14564   ATTTCATCGCCGCCG                 CGCG GAC CGTG                 TTCATGCAGCCATAG  50 448
CHC44_RS13120 2517835 .. 2517847 +  -6.3  -3.49475   GGTGACACCGTCAGC                CTACA TTT TGTAG                TTATCTCGACGTGAC  60 171
CHC44_RS13125 2519329 .. 2519348 +  -4.4  -3.21938   CTATCACACGCCCTT            TTTTAAAC CAGG GTTTGAAA             TTACTACCATTTTCC  49 513
CHC44_RS13175 2527348 .. 2527363 +  -8.2  -2.50074   TTAACGCCACCTCCC              CCGGCG CGGG TGCCGG               ATGTGTTATCCCGCC  59 37
CHC44_RS13205 NONE
        moeB 2535930 .. 2535948 +  -8.8  -2.87564   GATAAACATACCAAA             GCACGGTT TAT GGCCGTGC             TGTATCAACAGATAA  65 51
CHC44_RS13215 NONE
CHC44_RS13220 2539575 .. 2539592 + -11.3  -3.14211   TGGCGCTACGTTTAA             CAGGCCT GCGC AGGCCTG              TTAATCAGAAGGGAT  81 81
CHC44_RS13230 2541962 .. 2541989 + -10.6  -3.02144   CTGCCCGCTTAACTG        C-GGTGCGCCC TTTGTCT GGGCGCACCCG        TCTTACCGGACCTAC  76 54
CHC44_RS13240 2544804 .. 2544830 + -19.6  -3.03243   ACAGACTCTGCCTGC         GAAGCCCGATAG ACA CTATCGGGCTTC         TCTTACGGCATCAGT 100 40
        mntS 2546766 .. 2546792 +    -8  -5.77632   TTTATTTTGCATCCT         CAACGGAAATGG CGC CCATTTCCCCTG         TTTTTTTGTGGTTTT 100 62
CHC44_RS13260 2548597 .. 2548614 +  -8.4   -5.0925   TTCAGGCAAAAAAAA             TCCGCC CCGAAA GGCGGA              TTTTTCATTTTCACC  91 48
CHC44_RS13270 2550492 .. 2550518 +  -6.8  -3.61398   TTTTTGTCATATTTT         TTCTCATTTT TTACATT AAAATGAGAA         TTATTACCCACCAAA  64 124
CHC44_RS13275 2551336 .. 2551354 +  -7.4  -4.19953   TAAGTCATCCCTATA             CCCCTG CCTGGCA CAGGGG             TTTTGCACTTAAATA  74 162
CHC44_RS13280 2552438 .. 2552478 +  -9.9  -3.69216   AACGACCTGATGTTG GCTTGT-GGCCCGGT-AGTG AGGA CGCTCACCGGGCCTAC-AGC TCTTTTCCGTGACGG  77 41
CHC44_RS13285 2553211 .. 2553222 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  48 9
        glnQ NONE
CHC44_RS13295 2556360 .. 2556372 +  -3.3  -3.66166   AAGCGGCTTTGCTTT                TGCCC CTG GGCCA                TCTCTTTTTTCACCA  51 98
CHC44_RS13305 2557803 .. 2557815 +  -4.9  -3.41693   GACAAGAAAGGTAAA                TTCAA CCG TTGAA                TTAATTAATAATCAA  54 147
CHC44_RS13310 2558355 .. 2558376 + -13.7   -5.8187   TTGTTACCCTTATTT           GCCCGTCCG CCAC TGGACGGGC            TTTTTTTATTCGCTA 100 154
CHC44_RS13330 NONE
CHC44_RS13335 2564999 .. 2565015 +  -3.6  -3.65046   TTTAATGACGAGGCA              CGGCAT GAGTG AGGCCG              TTATTACGCTGCACG  51 14
CHC44_RS13340 NONE
CHC44_RS13345 2567912 .. 2567937 +  -8.3   -3.9941   TAAGGCGTTCACGCC         GC-CATCCGGCA TTA TGCCTGATGCGC         TTTGCTTATCAGGCC  76 75
CHC44_RS13350 2569447 .. 2569459 +  -4.8  -4.46212   CACGAACGCGTTGTT                GCCA CTTCA TGGC                TTTTCTCCTGAAGCA  68 388
CHC44_RS13360 NONE
CHC44_RS13365 NONE
CHC44_RS13370 2572559 .. 2572585 +  -5.9   -4.4009   ATAAATTTAAGCAGA        CGCGTTTTCGCT TTCC AGC-ACAACGCG         TTTTATCCGGTAAAA  70 37
CHC44_RS13425 2579397 .. 2579424 + -13.6  -2.95894   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCTCTTCTG  87 59
CHC44_RS13465 2589876 .. 2589892 +  -2.2  -3.36803   TTTAGCCATTAATCA              GCGGTA AGCGA TGCTGC              TTCTGGCTACACTTC  45 29
CHC44_RS13470 2590798 .. 2590820 +  -5.5  -4.33417   GTCGGCAGGCTATCC          ACGCTGTGCG GGTG CGC-CAGCGC           TTTATTCTCGCTGGC  69 417
CHC44_RS13500 2598371 .. 2598405 + -13.5  -4.25104   CCGGTTCAGGCTTAT     AAACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTGG     TTTTACTGCAAGCAA 100 49
CHC44_RS13510 2600935 .. 2600953 +  -3.8  -3.72695   TCCAGCACCATGACT             TTATCCGC CAG GTGGAGAA             TTTCATCGAGAGAAT  53 492
CHC44_RS13535 NONE
CHC44_RS13545 2605783 .. 2605797 + -11.4  -3.29263   AATGTATTATCAGAA               TGGCGC CGC GCGCCA               TTCTGGAACCACTCT  83 40
CHC44_RS13550 2606877 .. 2606891 + -12.8  -5.44119   TCCGTTTCATTCCCA               GGCGCG TAA CGCGCC               TTTTTTTCGGATAAA 100 55
        galE NONE
CHC44_RS13560 NONE
CHC44_RS13565 NONE
        galM NONE
CHC44_RS13575 NONE
CHC44_RS13580 2612320 .. 2612334 +  -7.8  -3.30124   TCACCTTTGCCGGAT               GGCGGT ATA ACTGCC               TTATCCGGCCTACGA  65 41
CHC44_RS13620 2621495 .. 2621511 +  -3.7  -4.56597   CGACAGCGTCCAAAA              TGAAAGA AAT TCCTTCA              TTTTTAGCAACCAGA  69 199
CHC44_RS13630 NONE
CHC44_RS13635 2623766 .. 2623801 + -15.6  -4.57353   TACATTAATATTGGT    AATATCGGTCCGGTAG ACTG TTACCGGACCGATATG     TTTTCTATCCTGCGC 100 44
CHC44_RS13645 2625622 .. 2625639 + -11.3  -5.54907   AAAAGTCTGATAACG             GGAGAGC TTTC GCTCTCC              TTTTTATTTTGTCAG 100 48
CHC44_RS13650 2626656 .. 2626682 + -13.6  -3.51934   ACCATTAACGGGAAA         GCGCGCGCGATC CTC GCTCCCGCGCGC         TGTTTATCCACAGGC 100 33
        gltA 2652712 .. 2652741 + -17.9  -2.79535   AGCGTTAATTGACAA       CCGGATGGCGACG CAAC CCTCGCCATCCGG        TACATTTTCCCTTTT 100 33
CHC44_RS13815 2653982 .. 2653993 +  -4.4  -4.21194   TAAAACGGGCGTGAG                GACA GTGT TGTC                 TTTTCAATAATGCCG  62 120
CHC44_RS13850 2659739 .. 2659764 + -11.1  -2.87463   ATCCTGATAGCAGAA         TGCCCGGTAGT TTGC GCTACCGGGCC          TGTATCACACCCCTT  75 34
CHC44_RS13865 NONE
CHC44_RS13870 NONE
        kdpB NONE
        kdpC NONE
CHC44_RS13885 NONE
CHC44_RS13890 2669684 .. 2669709 +  -9.7   -2.7471   GTCATTTATTTTCGG         CGTCGCGAATA ATTA TTTTCGCGGCG          ATATTATATTTTATG  69 80
        speF NONE
CHC44_RS13900 2673912 .. 2673940 + -14.5  -3.18657   CACGGCTGATGGCGC        GCCCGGGCTGCGG TAA CGGTAGTCCGGGC        ATTTTCACTCTTTGA  95 32
CHC44_RS13905 2674534 .. 2674549 + -10.4  -5.12068   CGTTAATATAAAAAA              GGAGCC TTAC GGCTCC               TTTTTCTTCCATATC  93 104
CHC44_RS13920 2677744 .. 2677782 + -13.1  -3.27902   CTAACTGATTAAAAA  C-TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGGCG   TCTCTTCTTCGCTGA  95 37
CHC44_RS13925 2678197 .. 2678214 +  -3.4  -3.37755   CGTGTAGCAGAGCGT             GCAGTC CCGCGT GATTGC              TGTTTCCGCATATCT  48 63
CHC44_RS13930 2679000 .. 2679016 +  -6.5  -4.55128   CAGTTTTATTAACAT              CTGCGAG AGA CTTGCGG              TTTTCATTTCGGCAT  76 185
CHC44_RS13935 2679593 .. 2679610 + -11.3  -5.39721   TAAATCTTTCGAAGA             GCCAACC GCCC GGTTGGC              TTTTTTATATCCTCC 100 44
CHC44_RS13940 2680593 .. 2680608 +  -3.2  -3.14683   CCGGTGAATGGCCAG              GCGCAA CCCT TTACGC               TTACTAAACCCCTGT  46 3
        tcuA NONE
        tcuB NONE
        tcuC 2684774 .. 2684792 +    -6  -3.74198   CCCGCACGCTTTCTT             CGTTAGCA AAT TGCTGATG             TTTACGCTCTTTTTT  60 202
CHC44_RS13980 2691852 .. 2691877 + -14.7  -2.87672   TCTGTAATGTTGTCT         CCGCCCCGC CAGTCAAT GCGGGGCGG          TAAATTTTTGATATC  89 34
CHC44_RS13985 NONE
CHC44_RS13990 2694326 .. 2694342 +  -3.7  -2.86177   AAATTCCCTGGGTAG              TTCATGA CCA TCAAGAA              TGTAATCTGCGATAT  46 69
CHC44_RS13995 2695091 .. 2695108 +  -2.5  -2.73124   ATCTAAACCTGTCCC             CTGCCCG ATGA CGCGCCG              CTTTCAGGCCTACGG  41 35
        asnB 2697052 .. 2697067 + -10.4  -5.60993   TTAACGATGACGAAA              GAGCCC CTAG GGGCTC               TTTTTTTATAGCAAA 100 42
CHC44_RS14010 NONE
CHC44_RS14015 NONE
CHC44_RS14020 NONE
CHC44_RS14025 2697648 .. 2697664 +    -3  -3.33815   CATCGAAGAAATCAT             CTG-GCT ACGT AGCTCAG              TTGGTTAGAGCACAT  46 39
CHC44_RS14030 NONE
CHC44_RS14035 NONE
CHC44_RS14040 2697970 .. 2697997 + -13.6  -3.30597   TACCCCAGCCACCTT        TAAAAAGCTCGC TTCG GCGAGCTTTTTG         CTTTTCTGCGTTTAT 100 30
CHC44_RS14045 2698761 .. 2698775 +  -4.2  -4.08216   CAATCCCAACGCATA               CTTCAG CGC CTGACG               TTTTAGCACGCCTGC  59 110
CHC44_RS14055 2701507 .. 2701532 + -13.3  -3.23216   AGGAAAGGCAATAAT         GCCCGAT-GGCG CTA CGCCTGTCGGGC         TTCCTGGTCATGGCC  91 47
CHC44_RS14060 NONE
CHC44_RS14065 2703212 .. 2703244 +  -8.4  -2.57988   TGCAGAATAGTAGCT     TGCCGGATGGCGGCG CTTG CGCC-TTATCCGGCC      TACATTCATGCCTTT  63 31
CHC44_RS14070 NONE
CHC44_RS14075 NONE
CHC44_RS14085 2707186 .. 2707202 + -12.3  -5.76949   GGCAACAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCGGAGTA 100 148
CHC44_RS14090 NONE
CHC44_RS14095 NONE
        artP 2709371 .. 2709392 +   -13  -2.90714   GCACTAATCTTCCCG           GCGCGCAC GTCAGA GTGCGCGC            TATCTCACGCTTTAC  86 34
CHC44_RS14105 NONE
CHC44_RS14110 2711691 .. 2711724 + -11.9  -3.51633   CAGGCGTGACATTGA     TAAAGATCACCACGCC AGA GG-GTGGTGTTCTTTA     TTCTATAAACTCTCT  88 32
CHC44_RS14115 2713431 .. 2713445 + -12.8  -3.65529   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTGCCCCTGT  95 17
CHC44_RS14140 2719066 .. 2719086 +  -4.6  -2.74012   AATCCCACCACTTCG            CCACTGTG ATACA CGCCGTGG            TGATTCAAATCCTGG  45 197
        leuS NONE
CHC44_RS14175 NONE
CHC44_RS14180 NONE
CHC44_RS14185 2729391 .. 2729408 +  -6.9  -2.85668   GTAACCAATGCCAGG             TCGCCTG TTGC CAGGCGC              TATCCTGTAACGCTA  53 290
CHC44_RS14195 2730944 .. 2730960 +  -5.1  -3.78934   GGTTTCGCCCATTGA              CAGCC CCCGACA GGCTG              TTATTCTCCGCAGCC  59 69
CHC44_RS14200 NONE
CHC44_RS14205 NONE
CHC44_RS14210 NONE
CHC44_RS14215 NONE
CHC44_RS14220 NONE
CHC44_RS14225 2737610 .. 2737640 + -13.5  -5.82316   TATACTATGCATCAG      TAA-AACTCCCGCC CTGT GGCGGGAGTTGTTA       TTTTTTTTACGTAAT 100 76
CHC44_RS14230 2737940 .. 2737954 +  -2.1  -3.31461   ATTGTAATACATCCA              GA-CGG TTAC CCGGTC               TTATCCGGGTAACTC  45 34
CHC44_RS14235 2738805 .. 2738819 +  -8.6  -3.10597   GCATGGTCTCTTCAG               TCCTCA TGA TGAGGA               ATTTTCCGTGAACAA  66 159
CHC44_RS14240 2739999 .. 2740023 +  -4.9  -3.38768   ATTTTACATTTTGCC          GGGCTGTCAGG CTG CTTTATGGCCC          TTATCAATGATATAC  54 98
        lipA 2741134 .. 2741148 +  -8.5  -5.58454   TTCAGGCAAAAAAAA               CCGGC AACTC GCCGG               TTTTTTTACTCTGCG 100 62
CHC44_RS14260 2742791 .. 2742807 + -10.8  -4.20042   AAGCGCAAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT  88 39
CHC44_RS14280 2745579 .. 2745609 + -13.9  -3.02043   GGCTGATAGCCGGTA       AGCCGGGGCGAGG GAAAA CATCGCCCCGGCA       TCTTAAACCAAGCTT  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
CHC44_RS14325 NONE
CHC44_RS14330 2755084 .. 2755109 + -15.5  -5.37345   GTAGGTTAAAAATGA         TGCCGTTCAGG TTCA CCTGAGCGGCA          TTTTTTATGATTAAA 100 54
CHC44_RS14335 2756125 .. 2756147 + -12.7  -5.07652   ATCATGAGAGTTAAA           CCCTCGCCG CCAGA CGGTGAGGG           TTTTCTTTTGGGACC 100 179
CHC44_RS14345 2756649 .. 2756668 + -12.2  -3.75897   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  93 58
CHC44_RS14355 2758612 .. 2758638 + -20.2  -5.11063   GCTAAAAACTGACAC         GCCCTGCCAGGT CGC GCCTGGCAGGGC         TTTTTATTGCATCAT 100 49
CHC44_RS14390 NONE
CHC44_RS14400 2768040 .. 2768050 +  -2.6  -2.69964   ATCCTTTATGTTAAT                 TATT TCG AATA                 TACTGTAGTTAACAC  41 147
CHC44_RS14405 NONE
CHC44_RS14410 2770237 .. 2770259 + -11.9  -3.01712   GGCGCGCAGCATATC           CGCCAGCGC CAGTT GCGCCGGCG           TATTGACGCAAAACG  76 353
CHC44_RS14420 2772541 .. 2772565 + -12.9  -3.13403   ACCTGTCATCCAAAC          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGAAAAAAG  91 281
CHC44_RS14460 2780979 .. 2781029 +  -7.7  -3.14211   TGTTTTAGCCTTATC GGAGT-CTTATCCGACTGACCAGA CCGA TTTTGTCAGTCGGATAAACGCCCC TTCATCAGCCAGCAT  64 33
CHC44_RS14470 NONE
CHC44_RS14475 NONE
CHC44_RS14480 2785197 .. 2785216 + -12.2  -4.14739   CACACAGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 46
CHC44_RS14505 2794448 .. 2794459 +  -4.4  -3.11289   GGAATTGGCAAAAAC                GATG CTGA CATC                 TCATTTTCCCCTTCC  49 70
CHC44_RS14510 NONE
CHC44_RS14515 NONE
CHC44_RS14520 2796730 .. 2796762 +  -4.9  -4.29845   AATATCATACACCTT     CTGGTCGGTGT-CGA GCAGG TCGCGCGCCG-CCAG     TTTTAGCTTCCGTTC  66 157
CHC44_RS14530 NONE
CHC44_RS14535 NONE
CHC44_RS14540 2798946 .. 2798963 + -12.7   -5.1361   TAATCCCCTGCCTAA             GCCGGAC GCCC GTCCGGC              TTTTTTCACCTTTCT 100 38
CHC44_RS14545 NONE
CHC44_RS14550 NONE
CHC44_RS14555 NONE
CHC44_RS14560 2801626 .. 2801640 +  -3.4  -3.53444   TTGGGCTTCTTGCCA               GCGCGC TGG GCCTGC               TTTGACGAGAGGTAA  50 6
CHC44_RS14565 NONE
CHC44_RS14570 2803865 .. 2803880 + -11.8  -5.15634   AGGCCTTTCTTCTGC              GGGGCG CTAG CGCCCC               TTTTTTCCTGAACTA 100 116
CHC44_RS14590 2810788 .. 2810804 +    -8  -3.05844   GCCTTGTACGGACAG              GCCGAA CAGCA TTCGGC              TATTCGAATAAACGC  60 487
CHC44_RS14600 2813715 .. 2813729 +   -10  -2.63549   TAGTTCGCCCTCATG               CGTCAG ATG CTGACG               ATATTCTTCAGGATG  63 477
CHC44_RS14620 2816721 .. 2816742 +  -5.1  -3.53012   CGCTCGGACGATAAA           C-GTAGGCTG AAC CCGCCTACAG           TTTGACGCCGCAGGC  56 27
CHC44_RS14630 2817434 .. 2817447 +  -2.4  -3.32844   ACCAGCAAAATAATC               TGAC ATCATC GTCA                TTATCCCGTCACGCG  45 72
CHC44_RS14640 NONE
CHC44_RS14645 NONE
CHC44_RS14650 2821605 .. 2821617 +  -3.4   -3.2614   AATGTACGATGCCGA                TGTG TCGCT CACA                TTGATATCCAAAGTC  46 505
CHC44_RS14680 2826662 .. 2826672 +  -5.4  -2.73124   TTCAATCAGGAGTTC                 CACT GTC AGTG                 CTTTAGGAAATGGGG  50 492
CHC44_RS14690 2826886 .. 2826900 +  -7.8    -3.322   CGAACCTGCGACCCA               CGGCTT AGA AGGCCG               TTGCTCTATCCAACT  61 18
CHC44_RS14705 NONE
CHC44_RS14710 NONE
        fimY 2829193 .. 2829204 +    -3  -3.59781   ATTACATAACAAATA                CTAA ACAA TTAG                 TCTTTCATATTATTT  50 226
CHC44_RS14720 2830580 .. 2830612 +  -4.7  -4.37092   TAGGCTAAAGGCTAC      CGGTTGCGTGGCGTC ACC GACGGCGTGAAGCTG      TTTTGTCGGCCAGGT  66 377
CHC44_RS24175 NONE
CHC44_RS14760 NONE
CHC44_RS14765 2838002 .. 2838035 + -12.5  -2.75307   GTGGCCTGATACAAG     TGCCGGATAGCGACGC AAA GCGTC-TTATCCGGCC     TGATTACGCTGTCTT  82 32
CHC44_RS14770 NONE
CHC44_RS14775 NONE
CHC44_RS14780 2840341 .. 2840363 +  -5.5  -3.97368   CGCGCTTCAAACGCT          TC-GCCGCCC GCCG GGGCCGCTGA           TTTATCCGTTCCACG  63 448
CHC44_RS14790 NONE
        lpxH 2842835 .. 2842845 +  -2.4  -4.08394   AAGCAGCGTGTCCCG                 CACC ACA GGAG                 TTTTAAGACGCATGT  55 121
        purE NONE
CHC44_RS14810 2844618 .. 2844659 +  -5.7  -3.36492   ATCGGCTTTGGCAAA CGGCGC-CAGCTCATCGGGC GAA GCCTGACGAATAGCGCGCTG TTGTGGCGTTCCCCA  56 213
CHC44_RS14835 NONE
CHC44_RS14840 NONE
CHC44_RS14845 2852589 .. 2852608 + -13.6  -5.71983   GCTATGTTGGATTTT            GCCACGGT GAGA ACCGTGGC             TTTTTTTATGCTTAA 100 74
CHC44_RS14900 NONE
CHC44_RS14905 2866793 .. 2866818 +  -6.1  -3.35197   TAGCTTATTTTTATT         GCCGGCT-GACG CTA CATTGAGCCGGC         TTAGTGTCTGTCGCG  59 38
CHC44_RS14940 NONE
CHC44_RS14945 NONE
CHC44_RS14950 2876816 .. 2876836 +  -3.9  -3.40592   GCCCGGCGGAAGCCA            TTTTCGGCG TTG CGCCCAAAC            TTAACTTTTCCTGTA  49 389
CHC44_RS14965 NONE
CHC44_RS14970 2879871 .. 2879883 +  -5.5  -5.40474   AACCGAATGGCTTTG                CTGGT TAA ACCGG                TTTTTTTCGCCACAT  95 402
        copA 2882530 .. 2882555 + -16.3  -3.42702   AAGCGTAAAAAGTCC         TATCAGGCAGC ATCA GCTGCCTGATA          TATTATTAAGTCATC 100 33
CHC44_RS14985 2883529 .. 2883543 + -12.8  -4.36914   GTTGACGTCCCGTCA               GGGCGC ATT GCGCCC               TTTTCTCCAACGCGC 100 52
CHC44_RS14990 2884440 .. 2884459 +  -3.4  -3.11291   CATCGTTATTATTAT            CCCGACGC TTTC GCTTCGGA             TCTTCAGATTGTCGC  45 83
CHC44_RS14995 2885460 .. 2885470 +  -8.2  -3.89956   AACTGTGGATAGGCG                 CCGG AGT CCGG                 TTTCATCTGTGCTAC  71 422
CHC44_RS15005 2888308 .. 2888318 +  -3.2  -2.98592   CATACTTATCACTTT                 TACG TTC CGTG                 CTCTTTTTGCCTTCA  45 108
CHC44_RS15010 2890538 .. 2890559 +  -4.3   -4.4518   AATTCAGCAATAGCT           CCCGGTAGC AGCG GATGCTGGG            TTTTACGTTTTGCTT  68 447
CHC44_RS15020 2892622 .. 2892667 +  -2.5  -5.00616   TGAGTTTCAGCATCA TATCAATATGTTCCGGCGTCG CGTT CAGCGCCGGAATGTACGCATA TTTTTTACCGCCCGC  74 54
CHC44_RS15035 2894849 .. 2894859 +  -6.8  -3.14344   AGCGTTATCAGGACA                 CCAG CAA CTGG                 TTCATACGGCGGATA  59 311
CHC44_RS15075 NONE
CHC44_RS15080 NONE
CHC44_RS15085 2903042 .. 2903055 +  -3.1  -3.79633   GGATGCTCCATCGCC               G-CCTG TAG CAGGAC               TCTTTTCACTTTCTC  54 356
CHC44_RS15100 2908202 .. 2908216 +  -2.8  -3.14878   GCAAGCGGTGATCAA               CCTG CTCAGCC CAGG               TCTTAACTTAAACAG  45 5
CHC44_RS15105 2911413 .. 2911428 + -11.8  -5.00616   GCTCACTGTTGATAA              GGCCGC GCAA GCGGCC               TTTTTTACGCAAAAA 100 44
CHC44_RS15110 2912278 .. 2912294 +  -2.3  -2.79133   AAAAATTATTACAAT              CATAGGT AGA ATTTATG              TCTGATAAACCATTA  40 39
CHC44_RS15115 2912622 .. 2912633 +  -5.8  -2.91869   CACATAGCAATAGCA                GGGA ACGT TCCC                 TCTAATACTTTATTA  51 137
CHC44_RS15120 NONE
CHC44_RS15125 2913835 .. 2913858 +  -8.1  -2.94322   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACT  61 33
CHC44_RS15140 2916285 .. 2916301 +  -2.9  -4.16842   GCAATTGCAACCCAT              CAGGCAT CGG ATGCTGG              TTTCTTGCGCATCCG  58 246
CHC44_RS15150 2916675 .. 2916715 +  -7.5  -2.53164   ACAGCGCTATCGCTG  GGTGTATTAACCCTCTCCG TAA CGGAGAGGGTTGGCGCAGG  ATTAATACTGGGTAG  57 16
CHC44_RS15160 2918368 .. 2918382 +  -9.2  -3.17212   CACAATTAAAAAACA               TGCCGC TAT GCGGCG               TTAATGGCCTGATGA  70 32
CHC44_RS15190 2925557 .. 2925575 + -10.3  -3.14344   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC  74 39
CHC44_RS15200 2928250 .. 2928261 +  -2.2  -3.15663   TACGCGTTACCATAT                TGGC TTTC GTCA                 TTGATCAGGATAACT  44 63
CHC44_RS15205 2929282 .. 2929299 +  -5.5  -3.15396   CAGTAGATCGCTCAA             TACCGCC GGGC GACGGTA              ATTTATATTGATGTT  50 335
CHC44_RS15265 2940539 .. 2940554 + -11.8  -2.92091   ATAGCAACAACAAGA              CCCGGC AGAA GCCGGG               TCTGTAGATGCCTAT  80 40
CHC44_RS15270 2942270 .. 2942282 +  -6.3  -3.35996   TGTTTTATTTTTACA                TTGGT TAT ACCAA                TTATCCCTCAACATC  59 252
CHC44_RS15275 NONE
CHC44_RS15280 NONE
CHC44_RS15285 NONE
CHC44_RS15290 NONE
CHC44_RS15295 2947311 .. 2947331 + -11.1  -5.68039   TTGCTATTGAAAAAA            CCGCCGTGT CAC AAACGGCGG            TTTTTTTATCCATTT 100 47
CHC44_RS15315 2952754 .. 2952764 +  -8.2  -3.29461   AACGAGACTCAACCT                 CGCG AAC CGCG                 TTATCCACACCGTTA  62 491
CHC44_RS15325 NONE
CHC44_RS15330 2954529 .. 2954543 +  -7.1   -3.2614   TACGGGCGTTCGCCC               TGCGC CAGAC GCGCA               TTAATATGCGCAATC  62 138
        phnR 2957378 .. 2957388 +  -3.2  -2.53379   ATAAGCGCAGCATCA                 TCCG GCG TGGA                 CTGATTTATTTCTCT  42 109
        phnS NONE
        phnT NONE
        phnU NONE
        phnV 2961667 .. 2961697 +  -6.2  -4.37711   ACCTTATCGAGAATA       CTGAAGTCGAAG TTTTCTT CTTCGGCTTCAA       TTTTCGCTTTAATGG  73 409
CHC44_RS15375 NONE
CHC44_RS15380 NONE
CHC44_RS15385 NONE
CHC44_RS15390 2967404 .. 2967419 +  -4.6  -3.25472   CAGACAATACTGCCG              TGGTCG TGTA CGCCCA               TATCTTTCGCCGTCT  49 385
CHC44_RS15425 2972196 .. 2972206 +  -6.8  -4.21812   CGAAATATTTAGAAA                 CGCA AAT TGCG                 TTCTTTTCACTCCCG  72 272
CHC44_RS15430 2973124 .. 2973147 + -12.4  -2.72144   CTAAACCTGCAAAAA          AGGCCAGAGG TCGT CCTCTGGCCC           GTTTCGGGCGCATGC  82 37
CHC44_RS15435 2973729 .. 2973743 +  -2.8   -5.1502   GCACCAACAACTTTG               TCAGCA GCC TGCTTA               TTTCTTTTTGTTTAT  73 261
CHC44_RS15490 NONE
CHC44_RS15495 2982592 .. 2982609 + -12.7  -5.28176   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTAAG 100 44
CHC44_RS15525 NONE
CHC44_RS15530 2994546 .. 2994556 +  -4.6  -3.41359   TTCATAGCCGCAGCG                 CGCG ACA TGCG                 TCTTCATTTTCGGCA  52 166
CHC44_RS15535 2995795 .. 2995810 +    -6  -3.06183   GGCCACAGCCAGGCC              GCGCCG CGCA CGCCGC               TTGAATCGCCATGCC  56 70
CHC44_RS15545 2998037 .. 2998057 +  -3.3  -3.17075   CATTGCTTTGTAGCA            TAATCAGGC CCC GTCTCATTA            TTAAATTAACACCCA  45 347
CHC44_RS15575 3001394 .. 3001436 +  -2.8  -4.18676   TAAATCCTGAAGCCC GGCTGGACGTCATGCCGCCAC TTCG GTG-CGGT-T-ACGTCCGGCA TTCTTTGCTTTGTAA  58 31
CHC44_RS15605 3007106 .. 3007133 + -12.8  -3.70674   CGATGTAATAGCGCA        CGCCCGAT-AGCG CAA CGTTTATCGGGCG        TCTTTTACCTCATCC  95 33
CHC44_RS15615 3008070 .. 3008088 +  -8.8  -4.13767   CCGGGCAACATTTCC             CGCGCAAG CGT CTTGCCCG             TTTTGGCCTCGGCCA  80 175
CHC44_RS15630 3010601 .. 3010612 +    -3  -3.80625   TAGTATAAATACGCA                TAAC CACC GTTA                 TTTCACTTATGGACA  52 38
CHC44_RS15635 3011849 .. 3011877 +  -5.4  -4.40298   TGTTAATATTCGGAG       GGCAAAC-GGTTA ATAC TGATCAGTTTGCC        TTTATTCATTTCAAT  70 83
CHC44_RS15650 3016988 .. 3017006 + -13.8  -3.55622   GTTAATTCTGTTACA             GGGCGGCG CGC TGCCGCCC             TTTCCCGACGTTCCC 100 36
CHC44_RS15675 3024661 .. 3024685 + -12.2  -4.91109   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC 100 117
CHC44_RS15685 3026179 .. 3026194 + -10.4  -3.73224   CACATCGTAACTTAG              CCAGGC GCTG GCCTGG               TTTCGTGGAGCATAA  76 360
CHC44_RS15750 NONE
CHC44_RS15755 NONE
CHC44_RS15760 3048237 .. 3048286 +  -9.7  -3.10344   AGAAAAAGCAAGGTT AGCCCAAATAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTAAACAGGCA TATATTGCCTGCAAA  71 24
CHC44_RS15815 NONE
CHC44_RS15820 3056264 .. 3056289 + -13.3  -4.18018   AAATAATTGTCGCTA         CGGTCTGGCGT TGAA ACGCCAGACCA          TTTTCAATCGCCAGG 100 35
CHC44_RS15825 NONE
CHC44_RS15830 NONE
CHC44_RS15835 NONE
CHC44_RS15840 3061849 .. 3061867 +  -3.2  -3.63991   ATTATCTGATTCAAT             TAATGTGT AGG ACGTATTA             TTATTACGCATCATA  51 198
CHC44_RS15850 NONE
CHC44_RS15915 3075683 .. 3075727 +  -9.4  -2.57463   ACCAGTTCTGATAAG TC-GC-ATTGTGCCTGATGGCG CTA CGCCATCAGGCATGACAGCAGG GTTATGCCGACAGTT  68 30
CHC44_RS15935 3080039 .. 3080075 +  -9.5  -4.66318   ACCTTCACGCTAATC   CCG-CTCGCCAGGTGCG TGGCC CGCAC-TGCCGAGTCGG   TTTTATTAACGTGCT  91 379
CHC44_RS15955 3083865 .. 3083886 +  -8.7  -3.91798   AATAACGCCCATTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCATTCCCCGTTA  73 36
        fadE 3088087 .. 3088104 + -14.1  -5.08088   TCTCGCCTCTTTCCT             GCCCCGC TTTC GCGGGGC              TTTTTCTTGCCGCTT 100 45
CHC44_RS15975 3088948 .. 3088968 + -11.8  -2.97676   TCACCTTGTAAGCAA            CCTGCCGC TCACC GCGGCGGG            ATTGTTTCACTCCGT  80 30
CHC44_RS15980 3089669 .. 3089692 + -11.8  -3.87815   TGAGTAAATATTTTT          GCCCGTTATT CCTG GATAACGGGC           TTTATCCAGGTCGGG  93 34
        pagN 3090941 .. 3090987 +  -8.7  -2.55544   TCATGTTTTGTATTG GGCATCGTCAAAAGACGACTGG CTGA CCAGTCG-CATATCTCGATGCC TCAATTCAGTCATCA  63 256
CHC44_RS16040 3100853 .. 3100875 +  -8.5  -2.61144   GGTTAAATAATAAAA          GCCGGGA-AT TTAA ATCTCCCGGC           ATATTTAAAAAATAA  63 45
CHC44_RS16100 3114495 .. 3114526 +  -7.3  -3.04144   AAAGCGCATTTGGAA      AGAGCATCGACAG TCTCAT CTGTGGATGCTCC       TATTAGAACTAAAGC  57 282
CHC44_RS16175 3132925 .. 3132943 +    -3  -4.68994   TTTTACGGAGGGTTC             AGTCCCCT GAC AGGGGAAA             TTTTTAACTAATGCT  70 350
        tagK NONE
CHC44_RS16250 NONE
CHC44_RS16255 NONE
        vasA NONE
CHC44_RS16265 NONE
CHC44_RS16270 3151386 .. 3151410 + -14.4  -5.95166   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGGGATACGG          TTTTTTTTACTTCAC 100 275
CHC44_RS16285 3152920 .. 3152937 +  -2.6   -2.7976   ATAGTGGCTACCAGG             CGGAAG CTTAGC CATCCG              GTTTGCGATATTGCC  41 15
CHC44_RS16295 3154469 .. 3154481 +  -3.3  -2.93623   CATTCGCTAACTTCG                CCGTT ATG ATCGG                TCGTCTTTTAAGCAA  44 55
CHC44_RS16300 3155903 .. 3155923 + -11.1  -4.31085   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  90 50
CHC44_RS16320 3160027 .. 3160040 +  -8.1  -3.35088   CATCCAGATGCAGAT               CCTGC GCCA GCAGG                TTGCTTGCCAGATTT  64 144
        metN NONE
CHC44_RS16375 NONE
        metQ 3170232 .. 3170249 + -12.7  -3.64915   TGTAATATTATTCAG             GACGGGC TATT GCCCGTC              TTGTCATTTATGCAA  95 63
CHC44_RS16385 3170697 .. 3170721 +  -2.1  -2.90349   TGTATCGGGTCCGCC          CTGAATATTTC GGC GAAATGAGCAG          CTTTCAGTTTGAACA  41 5
        tsaA 3171484 .. 3171502 + -13.2  -3.13343   TCACTTTTTTTGTAT             CAGGCTCA CAT TGAGCCTG             TTCGATCGTTCAACT  91 88
        proS 3173298 .. 3173318 + -16.9  -4.72497   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 73
CHC44_RS16415 NONE
CHC44_RS16420 3175870 .. 3175901 +  -3.7  -4.94058   CGGCGTGGTATCTCG     TC-GCCAGG-GCGGG ATCC CCTGCTCCTGCCAGA      TTTTCTTTAACTTAC  75 229
         map 3202850 .. 3202880 +  -7.5   -4.7497   AGAGTAAATACGTAG      GCCGGAT-AAGGCG TTCA CGCCACCATCCGGC       TTTTTAATGGGTGGC  83 213
CHC44_RS16555 NONE
        dapD 3206440 .. 3206455 + -11.8  -2.84878   AAGCGAGTGAAAAGC              GGGGGC GACA GCCCCC               CTTTGCATTACGGCG  80 39
CHC44_RS16570 3208382 .. 3208399 +  -5.6  -3.09452   AGCCGATCTGGACAA             GCTTAC CCGTAA GTAAGC              TGTGTGTTGCCGGAT  52 10
CHC44_RS16590 NONE
CHC44_RS16595 NONE
CHC44_RS16600 3215345 .. 3215359 +  -5.6  -4.68994   CATCGGGTCAACCAC               CAGGCC AAC GCCCTG               TTTTTCGATGGTCAT  76 264
        hemL 3218530 .. 3218557 +  -9.9  -5.96521   CCAGAAACAACGTAG       GCCGGGTAAGGCG AAGC CGCC--ACCCGGC        TTTTTTTTGGTTCAT 100 51
CHC44_RS16690 NONE
CHC44_RS16695 3238725 .. 3238736 +  -5.8  -4.25283   GTATTCTGGCCGCGT                GCGT AAAT ACGC                 TTTTCCTCACAGGGT  67 64
        dksA 3239348 .. 3239365 + -12.7  -4.21772   ACCCTATTTATGACA             GGCGGGA GTTT TCCCGCC              TTATTCTTTATTGCC 100 55
CHC44_RS16705 NONE
CHC44_RS16710 NONE
CHC44_RS16715 NONE
        panB 3243254 .. 3243266 +  -9.1  -3.30124   ACCGTGCCGGATGGC                GACGC GAC GCGTC                TTATCCGGCCTACAG  71 49
CHC44_RS16725 NONE
        panD 3244699 .. 3244738 + -10.2  -5.47218   GATTTTCAATAATAG  GACAACCC-TTCCAGAAAA ACA TATTTTGGGACGGGTTGTC  TTTTTTTAAATCACC 100 39
CHC44_RS16740 3245595 .. 3245618 +   -11  -4.67641   AAAAAGATTAGCCAA          TCCCTCAGCG GCTG TGCTGGGGGA           TTTTAATTTTAAAGT  95 53
CHC44_RS16745 3246435 .. 3246453 + -14.6  -2.71745   TTACGTACCAATGTA             GTGGGCCA TTC TGGCCCAC             GTTAATTATTCGGAA  89 54
CHC44_RS16750 NONE
CHC44_RS16755 3249658 .. 3249675 +    -2  -2.71144   TCAGCCGTTGCGACT             TTCGTA TTTAGC TACGAG              TAATTAACGCAGATC  40 5
CHC44_RS16760 NONE
CHC44_RS16765 NONE
CHC44_RS16770 3252081 .. 3252099 +  -4.4  -3.79533   TCTCACCGTGGTGAC             CGCCAGAT GGA AACCGGCG             TCTTTTGCTGCTTTG  58 153
CHC44_RS16785 3254601 .. 3254622 + -11.5  -4.68209   ATATAACTGATCCTG           GCGGCCAGC GTCG GCTGGCCCC            TTTGTTTATTGAGGT 100 31
CHC44_RS16790 NONE
CHC44_RS16795 NONE
CHC44_RS16800 3258982 .. 3258995 +  -3.8  -3.27525   CTGGAGATTCAGATT               CGCT GAGAGA AGCG                TTGGGTTTCGACAAG  48 20
CHC44_RS16815 3261583 .. 3261615 +  -8.4  -2.95459   AGCCATTAGCTATAG     GCCGGAT-AAGTCGC TTTA GCGACGCCATCCGGC      ATTTCTGCGCTTACT  65 40
CHC44_RS16825 3264766 .. 3264785 +   -15  -3.30124   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 33
CHC44_RS16835 3267023 .. 3267042 + -12.2  -3.71487   CTATTGCTGAAATAA            TGACCGTG CATC CACGGTCA             TTGTTAGCTATGATG  89 53
CHC44_RS16840 NONE
CHC44_RS16845 3268754 .. 3268774 +  -6.1  -2.71731   CGCGAGATTTACTAC            GGCCGCA ATATTTC TGCGGTC            TGATTCACCACTGGC  53 2
CHC44_RS16875 3274101 .. 3274142 +  -2.9  -3.36492   ACCTTTTATTATGCG CCGGAAGA-GAGCAGTCATT AAA AACGGCTGCCCCTCATCCAG TTATAGCATTACCAG  46 157
CHC44_RS16880 3274862 .. 3274883 + -18.7  -3.09273   ATAAGAAGCGCCATT           CGGGCCCGG AAAT CCGGGCCCG            TCTCTGTTACACCGC 100 37
CHC44_RS16890 NONE
CHC44_RS16895 3280438 .. 3280461 + -10.3  -2.67694   TGCCGGAATTAGCCG          CCCATACGC CTTCAT GCGTGTGGG           TGATCTGCTGATGCT  66 161
CHC44_RS16925 3289984 .. 3290007 + -18.2  -3.51924   GTGACGTTACTTTTC          CACCCTCCCC GTCC GGGGAGGGTG           TTATCTGCCTCACAG 100 43
CHC44_RS16930 NONE
CHC44_RS16935 3292655 .. 3292669 +  -3.4  -4.17701   TCTTCGCCATCGACA               CCGCCG CTT TGGGGG               TTTCTACTTTGTCAG  58 194
CHC44_RS16950 3294983 .. 3295005 +   -17  -2.91582   TGCTGATCCTCTCCA           CCCGATGGCG CTG CGCCGTCGGG           TCTATAAATCACCTG 100 35
CHC44_RS16955 NONE
CHC44_RS16960 NONE
CHC44_RS16965 NONE
CHC44_RS16970 3298262 .. 3298276 +  -3.6  -3.71848   ATATTAGAGGCTATT               GAAAAT GCG GTTTTC               TTGTTCCTGCACCCG  53 68
CHC44_RS16980 NONE
CHC44_RS16985 NONE
CHC44_RS16990 3301298 .. 3301319 +  -2.8  -4.05714   GCCCTGCCCCATCAC           GCGCGGCG GAGAGA CGCAACGC            TTTATCATTCACCAT  56 240
CHC44_RS17000 3303545 .. 3303562 +  -6.9  -5.09685   TTGCATCCATAAAAA             AGCGCAG TCGC CTGCGCC              TTTTTATCTGTGTTC  84 474
CHC44_RS17120 3331269 .. 3331286 + -14.1  -5.64274   CGAAGTCAAACAAAA             CCCGCGC CGTT GCGCGGG              TTTTTTTATGCCTGA 100 48
CHC44_RS17125 3332890 .. 3332902 +  -3.3  -2.62263   AAATAAAGAGAACAA                CAAGG AAA CCGTG                TAATGTCGAAGAACT  42 10
        leuB NONE
        leuC NONE
        leuD 3336025 .. 3336062 + -18.7  -3.26836   CGTTGATACCAAAAC   GACCAGCAATAAGCGAT ACTC ATCGCTTATTGCTGGTA    TCTATCTTATTTTAA 100 35
CHC44_RS17155 3338669 .. 3338693 +  -7.2  -3.62518   ATAATGCCGGCGAAG          GGATTTGAGG TTACC TCTCAAGTCC          TTTGCCACTCTTTAA  67 151
CHC44_RS17160 NONE
        thiP NONE
        thiQ 3342463 .. 3342479 +  -6.5    -3.273   GGATCGTGAACATAC              TGTGCTG ATG CAGCGCG              TGTTCGGTTTTATCC  56 507
        araB 3345807 .. 3345817 +  -2.4  -3.48529   GACTCATTAAGGACA                 CGAC AAT GACG                 ATTTTTGATAATTAT  47 31
CHC44_RS17190 3347324 .. 3347345 +  -4.3  -3.53811   CGTTAATTGGTGAAA           CGGATTGCC CGGT GGCACTGCG            TTTACCGGGCCTACG  54 35
        araD 3348163 .. 3348182 + -12.8  -3.20858   TAATGCCTCTAAAAA            CGCGTCCC ATGG GGGGCGCG             TTGATGAATCTGGTC  86 38
CHC44_RS17210 NONE
CHC44_RS17215 3352171 .. 3352200 +  -3.5  -2.66435   CCTGGACCTAATTAA       CGCCACTACCA CATTAGCC TGGTAGCGGGG        TCGTATACTCGCAAT  42 88
CHC44_RS17220 NONE
CHC44_RS17225 3356167 .. 3356205 +  -8.7  -3.21099   GGCATCTTCCAGCGT  CGGGCCGCGCTGCGCCTG CTGC CAGCCGCCGC-CGGACTG   TTGATGATAACCGCC  65 333
CHC44_RS17235 3359403 .. 3359413 +  -8.2  -3.35813   GATTTACAACGTAAT                 CCGC ATT GCGG                 TTAATTGAAATGGAA  65 48
CHC44_RS17240 3360695 .. 3360705 +    -4  -3.11569   AACAGCGCGCCAGCG                 CTTA CGT TAAG                 ATTTTGAGTAACTAA  47 0
        pdxA NONE
        ksgA NONE
CHC44_RS17255 NONE
        apaH 3363790 .. 3363845 +  -9.1  -3.53811   TGCCTGATGGCGCTA CG-CTTATCAGGCCTACATCTGGCGAC ATCT GGCTCAAGA-GTAGGCCGGATAAGGCG TTTCGCCGCCATCCG  73 49
CHC44_RS17310 3370950 .. 3370961 +  -3.6  -4.11371   AAATGCTATCACCAT                GGGT CCCT GCCC                 TTTTACCCCCTCTTG  60 408
CHC44_RS17355 NONE
CHC44_RS17360 3379868 .. 3379901 + -13.1   -2.8294   TGATAAGACGCGGGG     CGTCGCCATCAGGCA ATCA TGCCGGATGGCGCTG      TGCTTATCCGGCCTA  85 58
CHC44_RS17365 3381161 .. 3381207 +  -7.3   -3.6682   GGCCAAAGTTGAGGA TTAAACGCGATGCGCTAATCGG TTTT CCGGTTAGCGC-TCACGCCTGA TTTCAGTGGATAAAG  67 22
CHC44_RS17370 3382782 .. 3382812 +  -3.1  -2.76418   AAAATCTGAAATAAA       CCTTCCGGCAGGA ATCCC TCCCGCCGGGAAA       CTATTTATCTGGAGA  43 27
CHC44_RS17375 3383645 .. 3383687 + -13.6  -2.60496   CCGGATGGCGCTTCG CTTATCCGGCCTACAG CACATGCGCAA CCGTAGGCCGGATAAG GTGTTTACACCGCCA  86 51
CHC44_RS17380 3384542 .. 3384563 +  -5.1  -3.53224   TCAATCGGCGATAGA           GTTGAGAGT CGAT ACTCACGAC            TTTCACCAGACGCTG  55 242
        citN 3398118 .. 3398128 +  -2.4  -3.06696   TGATGGTGTAAAAAA                 ACGC ACG GCGG                 TGTCTTGGCAGCAAA  42 30
CHC44_RS17445 NONE
        oadA NONE
CHC44_RS17455 3401624 .. 3401646 + -12.1  -4.27192   CGATGTAATAGTGGA           TGGGATACG CATGT CGTATCCCA           TTTTCATCCAAATTT  95 33
CHC44_RS17460 NONE
        dpiA 3404199 .. 3404209 +  -5.4   -3.0464   TATCCACCACCGTGG                 TACC GGC GGTA                 TATTGCCCCTGCGTT  50 166
CHC44_RS17510 3412916 .. 3412930 +  -8.5  -5.64274   AGCTTTGTAGAAAAA               CCCGC GTAAA GCGGG               TTTTTTTATGCCTGC 100 57
CHC44_RS17515 NONE
CHC44_RS17520 3416797 .. 3416829 + -14.9  -3.06671   TGAACTTGTAGAATG      ATTCCGGCTGCGG GTTAGTA CCGCAGCCGGAAG      TATTACGGTAGGTAT  89 30
CHC44_RS17555 3426426 .. 3426458 +  -9.2  -4.74052   TTACTTAATTTCCCC      GGTTTGTAGTCGTG AATGA CACGACTACAGGCA      TTGTTTTTCTTTAAT  90 63
CHC44_RS17560 3428066 .. 3428096 + -16.3  -2.87274   GCAAATAAGCCATAA       TGTTATGCGGTCG ATAAC CGGCCGCATAACA       TACTTAGTTATGCAA 100 33
CHC44_RS17570 3430874 .. 3430891 +  -2.7  -5.16472   AAAAAGAAAGGTCGA             CTGAAAT GTTG ATATCAG              TTTTTTGACATTTTT  79 114
CHC44_RS17580 3432923 .. 3432934 +  -2.2  -3.72588   TCCCATAAAATGAAT                CTGA GCGG TCGG                 TTTCGCTGTCCCTTC  50 332
CHC44_RS17645 NONE
CHC44_RS17650 NONE
CHC44_RS17675 3454311 .. 3454325 +  -2.8  -3.70022   GACTTAAAGTCATTG               GCGA CGATTAA TCGC               TGTTATTTCTATTCC  50 15
CHC44_RS17680 3455082 .. 3455105 +  -8.2  -3.69395   GTGAATGCCCTCACT          GGGGGAAA TATTTTCT TTTCCCCC           TTATTAGATCATAGA  69 37
CHC44_RS17685 3455791 .. 3455823 +  -7.7  -2.67903   AGGCGCACTAAATCT      CTTTTATTCCTCCCG CAC CGGGAGGAATAACCC      TACTATCAGTATTTT  59 30
CHC44_RS17700 3459233 .. 3459255 +  -4.2  -3.05463   TCAACTCTGCGGCGT           TTTTTTGCTA AAG TCGCAGAAAA           TTCCCTGCAAGGACT  47 62
CHC44_RS17705 3460102 .. 3460141 +  -9.3   -3.1505   CAAATCGGCGCCACC CCATAG-GCCCGGTAAGCG ACAG CGCC-ACCGGGCGCAATGG  TTACTGGCGGGTCAT  70 79
CHC44_RS17740 3467252 .. 3467278 + -13.1  -4.38927   GCCAAACCGTAAAAA         CAGCCGGTAAG TTATT CTTACTGGCTG         TTTCTTATGTCCCCC 100 53
CHC44_RS17745 3467832 .. 3467877 +  -8.9  -4.70046   TCCCGCCGGGAGGAG TTCCGGCAGGCGGCGATTTCGC TCA GT-AAAACGCCGCCCGCCTGCA TTTTGTACTTTTCTC  90 52
CHC44_RS17750 3469131 .. 3469147 +  -5.3  -4.56358   GAAGCGCATACAGAG              TAAAATA TAA TATTTTA              TTTTATATAGCTATC  71 295
CHC44_RS17755 NONE
CHC44_RS17760 3470476 .. 3470492 +  -5.8  -2.59742   TATGGGATGAGTTTA              GAGCCG CATTC CGGTTC              ATTCTAGCCATTAAC  50 2
CHC44_RS17765 3473065 .. 3473081 +  -2.1  -2.64747   GGCGTAGAAATCTTA              CACGAGC AAT GCCAGTG              ATTCTGGTGGGATAA  39 8
CHC44_RS17770 3473673 .. 3473689 +  -2.2  -2.65504   CATCTTTCTATTTCA              CCTGGT ATAAA AGCAGG              AATTTTTCATGAGAA  39 41
CHC44_RS17775 3474798 .. 3474834 +  -8.6  -3.41807   ACGGCATCACAGTTT   CTGGCGCTGCGCGGGAA AACG TTAACGCGC-GCGCCCG    TTAGATTTATTTCCA  69 40
CHC44_RS17800 3480001 .. 3480013 +  -9.1  -3.80573   ACCACCCACCCAGAC                GCCAG CCA CTGGC                TTTCCTGGTAATCGA  73 98
        yjjX NONE
CHC44_RS24200 3481315 .. 3481347 +  -4.6  -4.13945   GACTGTTTGACCCGC      GCGTGATGGTGGCG ATGCC CGCCCCCAGCTCGG      TTTTCAACTCGCGCT  62 20
CHC44_RS17830 3485512 .. 3485544 +   -12  -2.74443   GTTGTGAAACTGTAG      GCCTGATAAGACGC GGTAA GCGTCGCATCAGGC      ATTGGTTCTTATCCC  79 102
CHC44_RS17855 NONE
        lplA 3491187 .. 3491220 + -12.7  -3.57144   TGTGCGCTAAATGAA     TAATATCAGAGAGAC GAAT GTGTCTCTGATATTA      TTTAAACATAACAAC  95 31
CHC44_RS17865 NONE
CHC44_RS17870 NONE
CHC44_RS17875 NONE
CHC44_RS17880 NONE
CHC44_RS17885 3496699 .. 3496730 + -10.1  -2.58491   GCTGACGAAATAAAC      GATGAAGGGGGCC TGCTCT GGCCCCCTTCACA       ATCTTACTCTTTATC  70 28
CHC44_RS17910 NONE
        yjjW 3504174 .. 3504197 +  -3.8  -3.97947   GGTTCGCGGTAGATC          CTGGCGCT TTAAGTGC ATCGCCAG           TTTGTCATGCGTGCG  58 391
CHC44_RS17960 3511503 .. 3511515 +  -9.1  -3.28791   CATGTGCCGGATGGC                GACGC CAG GCGTC                TTATCCAACCCACGT  71 72
CHC44_RS17965 NONE
CHC44_RS17970 NONE
CHC44_RS17975 3512397 .. 3512409 +  -7.7   -2.5639   TAAAACAACAACACC                TCGCT TTA AGCGA                CCTTTTCTCATACGT  59 457
CHC44_RS17985 3513623 .. 3513633 +    -4  -2.76885   TATCGCTATCGATAG                 GATT AGC AATC                 ATTATCATTTAGATT  45 101
CHC44_RS17990 NONE
CHC44_RS17995 3515560 .. 3515586 +  -6.4  -3.28745   ATTTATCGCCAGTTC         CGTCAGGCTGGA TAA TCCTGTCCGGCG         TTCAGTTCTTAACGC  59 520
CHC44_RS18010 NONE
CHC44_RS18015 3518432 .. 3518445 +  -3.7  -2.85545   CCCCCGCGTGTGATT               GGTGG AACG CCTCC                TGCTGTTCTTACAGG  46 28
CHC44_RS18020 NONE
CHC44_RS18025 NONE
CHC44_RS18030 3520527 .. 3520541 +  -4.2  -3.20751   GTTATTAGAATTGCA               GCAATG TGA CATCGC               TATTACATTGTTAGA  48 232
CHC44_RS18035 3522971 .. 3523003 + -12.2  -2.94099   CAATAAACTGGCGCA     CAG-GCCTGATAAGCG AAG CGCT-ATCAGGCACTG     TATATGCTACACGCC  80 102
CHC44_RS18080 3535034 .. 3535059 + -11.1  -2.62263   ACCACTAAAACTGAT         GCCGGGTAGCGC ACA GCGAT-CCCGGC         TAGTGTAGGCCGGAT  74 33
CHC44_RS18085 3535300 .. 3535320 +  -3.2  -3.14344   TTACGGCGGCGATGG            CAAAGGCG GTATG CGCTGTTG            TTAATGGAGAGACTA  46 1
CHC44_RS18090 NONE
CHC44_RS18095 3537167 .. 3537186 +  -7.9  -3.25823   GCAGGTATAGGCTGA            CCTCAGT ATCATC ACTGAGG             TTACTATGGAACAGG  64 48
CHC44_RS18100 3537966 .. 3537981 +  -4.6  -4.35483   CCAGAAACCAATAAA              GCGACT AAAT AGCCGC               TTTATTCTCATCACC  66 158
CHC44_RS18105 3538505 .. 3538527 +   -12  -4.04295   AAACGCATAAAATAA           GCTGGCAAAG AAC CCTTGCCAGC           TTTAATTATAATTCA  93 39
CHC44_RS18120 3539935 .. 3539963 +  -3.8  -3.35046   GGCCGTAGTGGGAAT        CGTTGGCGAG TTTTACCGC CTCGTCATCG        TCTTTCACCACATAC  49 345
CHC44_RS18135 3543949 .. 3543982 +  -8.9  -2.73364   CCGCTGAGAAGTAAA     TACTCTGCCGGATAG AGGC TTATCCGGCACAGGA      TAATCTGATGTTTTT  66 27
CHC44_RS18140 3545402 .. 3545413 +  -5.8  -3.51232   TTACAACAACAATCC                GGCA TTCC TGCC                 TTACTTTAGCAAAGA  57 122
CHC44_RS18145 3546844 .. 3546876 + -10.6   -3.1876   TGGCTACGGATTACC     CGGCCCATCCATGGGC CTC GCCC-TG-ACGGGCCG     TTGCTCACTCCAGTT  78 248
CHC44_RS18155 NONE
CHC44_RS18160 NONE
CHC44_RS18165 3549827 .. 3549841 +  -2.8  -3.28712   CCGCTAGTTTCAGAC               TGCC CCATCAC GGCA               TTCTGAAAGAGGACG  46 44
CHC44_RS18170 3551046 .. 3551072 +  -9.5  -4.83169   ATAAGACTATCGATT        TGCGGCAGC-AGC AGC GCTTGC-GCCGCA        TTTTTATCGCCACGT  95 236
CHC44_RS18180 3551919 .. 3551945 + -12.2  -2.53164   CAAATCCACGGTCTC         CGTGGCGCTGCC TTC GGCGTCGCCATG         ATTGCTCATGCGTGA  71 186
        trpS 3554192 .. 3554213 +  -4.3   -3.7642   CAGGTGCTGCCACAT           CGCCAGC TTCGCTGC GCGGGCG            TCTTTCTTAATTAAC  55 143
CHC44_RS18205 3556056 .. 3556066 +  -8.2  -3.66178   TGCGCCAGCATGAGA                 GGCG TTC CGCC                 TTTAGGATTGCCAAA  68 209
CHC44_RS18230 3559984 .. 3559996 +  -9.1  -2.55069   TGTGCCGAAATCGAA                TGCGG ACA CCGCA                GTGTGTTTGCACGTT  66 209
CHC44_RS18235 NONE
CHC44_RS18240 3561946 .. 3561975 + -10.2  -2.75343   CGATAACGTGAAGCA       GGAGGTATAGCCT ACAAG AGG-TATACCTCC       GTTTAAAAGTATGCA  71 35
CHC44_RS18250 3563221 .. 3563255 + -16.1  -3.89501   ACCTCTAATTATAAA     TTAAACAAATCTGTC TCTAT GACAGATTTGTTTAA     TTTATAAAGCTGTTA 100 33
CHC44_RS18255 3565047 .. 3565066 + -13.6  -3.09349   TGGTCTAAATTATTA            GGAAGGGG AACC CCCCTTCC             ATTGTTATTTAATTT  87 33
CHC44_RS18275 3568780 .. 3568790 +  -5.4  -3.54129   CGGTCGCTCCAGCGC                 GTCA AAC TGAC                 TTTGCAGCAGGTCTG  55 182
CHC44_RS18285 NONE
CHC44_RS18290 3571234 .. 3571251 + -12.7   -3.6581   CCAGGGAAATACGAC             GCAGCGC GTAA GCGCTGC              TATTTTGGCGCTAAT  95 41
CHC44_RS18295 3572584 .. 3572595 +  -2.2  -3.41693   CGTACTGGCGCTGAA                TGCG GTTC TGCA                 TTAATTCATCATCCG  45 10
CHC44_RS18300 3573809 .. 3573846 + -12.1  -3.32647   CAGGCCTACGGGTCA   TGGTAGGCCTGATAAGCG CAG CGCC-ATCAGGCCTACGA   TTACTGTGATTACGA  85 173
CHC44_RS18320 NONE
CHC44_RS18325 3577986 .. 3577997 +  -7.2  -4.09685   AAGGCGCATTAGCGC                CGCC ATCA GGCG                 TTTTGCCGGATGGCG  72 67
CHC44_RS18330 NONE
CHC44_RS18335 3581493 .. 3581512 +   -15  -4.66609   ACAACATGAATTATG            GGCCGACG TAAA CGTCGGCC             TTTTTACATCAGATA 100 139
CHC44_RS18345 3583453 .. 3583493 +  -8.6  -3.61894   TTATTTTTGCTGATA TAAGTAAT-CCCGGA-AACA TCC TGTTATCCGGGAATCACTTA TTATTCAAGGAAGTT  72 72
CHC44_RS18350 3584093 .. 3584109 + -13.7  -3.72576   GAGTGAGTTCTTTTT              GCCTGCC GCA GGCAGGC              TTTACTCAGAACAGA 100 117
        argF 3586830 .. 3586848 +  -5.2  -4.46212   AACACCACAAAGTCG             CCTTCGTT CAG GACGACGG             TTTTCTCGTCGACGC  70 202
        arcA NONE
        arcC 3590033 .. 3590045 + -10.5  -3.30124   GGCTTTTTACCGGAT                GGCGG CTT CCGCC                TTATCCGGCCTACAG  76 41
        argF 3591140 .. 3591168 + -13.2  -2.62184   GGCGACTAATCCCAC        AGGATATGCGCC CTCGC GGCGCATATCCG        TGATATCAGGAGAGA  84 32
CHC44_RS18395 3592603 .. 3592613 +  -4.6  -3.28791   TGTAACGAGCCAGAT                 GGCG ACG CGTC                 TTATCCGACAGGACT  52 36
CHC44_RS18400 NONE
CHC44_RS18410 3593447 .. 3593464 + -12.7  -5.75342   GAAAACCAATACCAA             GCCCCTC AATT GAGGGGC              TTTTTTTTGCCCAGG 100 13
CHC44_RS18415 NONE
CHC44_RS18420 3594897 .. 3594914 +  -3.4  -3.32844   ATTATGTGGTGCTGG             CCAACT AATTTG GGTTGG              TTATGAGATCCCGGC  48 18
CHC44_RS18425 3595409 .. 3595434 + -12.7  -2.72839   GGCGCTATCGCTTAT         TCGGCCTGGTAT GCC AT-CCAGGCCGA         TAATTCACAATACTT  82 67
        treR 3599547 .. 3599560 +  -2.3  -4.56775   ATCGTCGCTGCGTTT               CGGGA ACGT TCCCA                TTTTTAAACCAACGT  61 77
CHC44_RS18440 3601057 .. 3601069 +  -3.3  -3.05384   AATTGTCTAATACTT                CTTCG GGG CGCAG                TTGCGTCCCAACGCA  45 31
        treC 3602777 .. 3602807 +  -3.9  -3.16921   CCTTATACGGATAAA       CGCCACAAACC TATTGACAC GGGCTGTGGCG       TTGCTCCAGGTTACT  48 49
CHC44_RS18450 3605363 .. 3605401 +  -8.9  -3.00946   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  68 88
CHC44_RS18455 3606245 .. 3606263 +  -7.4   -4.1899   ATCAATGCATCTTCA             CTGTCGCT AAG AGTGACGG             TTTTCACTGGCATGC  74 385
        yjgA 3616749 .. 3616767 +  -5.9  -3.53811   CGTCCGAGTAGCTCC             CGCTCGA TCCGC TCGCGCG             TTTCCACCGCCTGAA  57 100
        iolC 3625455 .. 3625483 + -16.7  -3.02043   ATGCCTGCCTCATCA        CGCCCCGTGTCTG CAT CGGACAAGGGGCG        TGTTCAAGGACGATT 100 40
CHC44_RS18560 3627076 .. 3627091 +  -6.1   -4.1552   CCGATCGGCTCAAAG              GCCAG CCGCAT CTGGC               TTTCTTCCGCCACTG  67 434
CHC44_RS18590 NONE
        mmsA 3633903 .. 3633913 +  -6.8   -3.2048   TCGGAGTTCAGTATG                 CCGA CTC TCGG                 TTAATACGCTTTCAG  59 11
        iolB 3634773 .. 3634795 + -12.7  -5.46657   GTTGAGTGGTACTTT           GCCAGCCGT CCTCT GCGGCTGGC           TTTTTTATTCAACTC 100 47
CHC44_RS18610 3636936 .. 3636974 +    -2  -3.18378   CCGACATAAGATGAA   TTTATCTATTTGTT CACTAAATTCA AACAGATAGATGAA   GTTTATTCTGGAGAT  44 205
CHC44_RS18615 3638442 .. 3638477 + -12.8  -5.53991   GATTAAGTTTCACCA    CAATGCCGATGATCG CTAAATA CGATCATCGGC-TTG    TTTTTTTACTCCGTC 100 35
CHC44_RS18635 3642390 .. 3642425 + -13.3  -3.23274   CGGAATAACGCATGA    AGCCGCCATTGGGCA ATAACA TGTCCGATGGCGGCG     TTGCCTTATCAGACA  91 55
CHC44_RS18640 3643147 .. 3643168 + -10.9  -5.11063   AAGCGTCAAGATAAA           GGCTCTCAT AGTA ATGAGGGCC            TTTTTATTGGCTAAT 100 55
CHC44_RS18645 NONE
CHC44_RS18650 3645923 .. 3645940 + -12.7  -3.14878   GAATGTAAAAAACAA             CGCCACC CGAG GGTGGCG              TGTTCAGTTCAGGGC  86 53
CHC44_RS18670 3652746 .. 3652767 +  -5.1  -4.41895   CTAGCCCTGAACTTA           TCGGCTC ACTGCTAC GAGCCGG            TTTTCATTAAACGTT  68 115
CHC44_RS18675 3654206 .. 3654226 + -16.9  -6.31682   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 49
CHC44_RS18685 NONE
CHC44_RS18690 3655762 .. 3655783 +  -4.4   -3.0464   ACGCCCAACACCGGC           TTGCCCTG CTCAAT CAGCGCAA            TATTGACCGTGAATT  47 430
CHC44_RS18700 NONE
        cpdB 3658312 .. 3658365 + -19.3  -2.78816   AACGTGAGTCCCGTA TGGC-GCT-GCG-TTTATTCGGCCTG CCAGT CAGGCCGAATAAAGCGCTAGCCGCCA TCTGATAAACAGTCC 100 39
CHC44_RS18715 NONE
CHC44_RS18720 3660702 .. 3660721 +  -7.8  -2.98493   CGGAAAAAGCGACCG            TCGTTCCG GTCA CGGAACGC             TAATTTCATACTGGC  62 3
CHC44_RS18725 3661988 .. 3662011 +  -4.6  -4.07568   TTTCGCCGGTACCGC          GCGTTTCGATA GCT TAGCG-AACGC          TTTTGGCGCCACGCC  62 524
CHC44_RS18740 3664821 .. 3664842 + -10.2  -3.61398   TACCCTATTCGTTCA           GGTGAAGC ATTACC GCTTCACC            TTATTCACCCACCAA  78 66
CHC44_RS18780 NONE
CHC44_RS18785 3668126 .. 3668143 + -12.7  -5.00616   AGCCATAGTTGATTT             GCCCCCT GAAC AGGGGGC              TTTTTTCGCGGAAAG 100 62
CHC44_RS18820 3674062 .. 3674079 + -12.7  -5.22943   TGTGAGTCGATATCA             TGCCGGG ATTA CCCGGCA              TTTTTTCCATTTACT 100 36
CHC44_RS18825 3675027 .. 3675044 +  -3.3  -3.64703   TCGCCCCGGCGAGTG             CCTGCTG GAGC CGGAAGG              TTTCGATAGCAGGCA  51 141
CHC44_RS18835 3676179 .. 3676191 +  -2.7    -3.192   TCAATAACAGTAGAT                TGATT TTT AGTCA                GTTTTACATTGCTTT  45 34
CHC44_RS18840 3676897 .. 3676920 +  -3.1  -4.36914   CGCAAAAGCTTCACT          CAATACGTC ATAGAC GCCGTGTTG           TTTTGTCAGCACCCG  62 346
        queG 3700986 .. 3701000 +  -8.6  -3.71649   CGCTTGGGTGCGTCT               GTGCTT AAC AAGCAC               TTTCAAATTTGGAGC  75 383
CHC44_RS18980 3702345 .. 3702379 + -11.5  -3.04144   CAGTGGCGGGAGAGC    TGCCGGAT-GAGACGC TGTG GCGTTGCCATCCGGCA     TGTTACGCCTCACAG  79 43
CHC44_RS18990 NONE
         psd NONE
CHC44_RS19000 3708529 .. 3708541 +  -9.1  -3.30124   AGAAATGCCGGATGC                GACCC GTC GGGTC                TTATCCGGCCTACGG  71 56
CHC44_RS19015 NONE
CHC44_RS19020 NONE
CHC44_RS19025 NONE
CHC44_RS19030 3714892 .. 3714920 + -17.6  -5.83211   TCTAAGTTGCCACGA        CGCCCTCTTATC TACCC GATAAGAGGGCG        TTTTTTCTTTTCCTG 100 36
CHC44_RS19035 3715686 .. 3715705 +  -3.4   -4.4078   AGTCCAGATGGCGTA            CGCCGTTC CAAC GGGCAGCG             TTTTCATTGCCCAGG  64 186
CHC44_RS19045 3717142 .. 3717163 + -10.1  -4.59773   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  91 464
        epmB 3718970 .. 3718988 +  -4.4  -2.76291   ATAAAGTCCGTTTTA             GGACTCGC TTA GCGTGTAC             TGCATTTTCGAATTA  47 177
CHC44_RS19070 3720436 .. 3720459 + -13.8  -4.00066   TGACTAAAAGAAAAA          CCCCCGGTCA TTTC TGCCCGGGGG           TTTCTCAATTCTGGG 100 504
CHC44_RS19090 3724428 .. 3724453 +  -2.5   -5.4833   ACTCTTAATCATTTC         T-GCCGCCGG GCTCTCA CCGGCCGCCA         TTTTTTGTTGCATCA  85 351
        aspA 3726437 .. 3726457 + -15.5   -5.4505   GGGTAGTACCAAAGA            GGCACGTCA CGA TGACGTGCC            TTTTTTCTTACAAGA 100 48
CHC44_RS19105 3727841 .. 3727863 + -14.8  -3.30635   TGTAAGTGTTTCACC           CGCGGGGCGT ATC ACGCCCCGCA           TTCTCCCGCCCTTTG 100 36
CHC44_RS19110 NONE
        dipZ NONE
CHC44_RS19120 NONE
CHC44_RS19125 3730794 .. 3730810 + -13.7   -5.1417   CACTTATTCAGAAAA              CCCAGCC TAT GGCTGGG              TTTTTGCTTTTCTGG 100 39
CHC44_RS19135 3732341 .. 3732382 +  -3.3  -2.57132   TTAAAATTGTGTAAG TGCCTGTTTTTGATATGTT CACTCC AACA-A-CAGAGACAGGCA ATTATGGACGAAAAG  42 123
CHC44_RS19160 3736279 .. 3736304 +  -2.7  -4.98531   AGCTATATATTAGTT         TTCTTTTGAAA TATT TTTCAGAATAA          TTTTTGATTTACACG  70 226
CHC44_RS19165 NONE
CHC44_RS19170 3737709 .. 3737720 +  -4.4  -3.23853   AGCAGTGAATGAAAG                CTGA TCAA TCAG                 TGTTCGTTCCGCAAA  50 231
CHC44_RS19180 3738063 .. 3738077 +  -2.8   -3.6944   CAGTATCGATAACGA               TATCAG TAA CTGACA               TGTTTCTGTTCCGCA  50 13
CHC44_RS19190 3741506 .. 3741519 +  -2.4  -3.04263   TACAGGCCAATAGCA               TCAG GCCAAA CTGA                TCTTCCGGCTCGCGT  42 333
CHC44_RS19215 NONE
CHC44_RS19220 3748645 .. 3748659 + -11.4  -4.98531   TATTTTCTATTATTA               CAGCGC TCT GCGCTG               TTTTTAATTTCAAAA 100 181
CHC44_RS19225 3749112 .. 3749132 +  -5.4  -3.80841   GTTAATCGTCGCCAC            TGGCGCAT TGAAT ATTCGCCA            TTTCCTGATGCTCAT  61 65
CHC44_RS19230 3750563 .. 3750579 +  -9.3  -3.28712   GGATTCCTGTAATGG              CCGCGCG CGC CGCCCGG              TTATGCGCGGCGCGC  71 29
CHC44_RS19235 3752306 .. 3752331 +  -9.7  -2.66598   GCGCGAAATAACCTG         GCAGGCCCGG CGTTCTC CCGGGCC-GC         GTTATCGGTTAATTG  68 30
CHC44_RS19250 3756604 .. 3756633 +  -6.5  -3.14344   ACTTTACACCCCCTA       TTTGACG-GGGTAA TAC TTGCCCACGTCACA       TTCATACGGCGGGTC  57 169
CHC44_RS19255 3759040 .. 3759059 + -12.1  -5.60993   CTGTCATACCTTTTT            GCGCGGG CCCCAT CCCGCGC             TTTTTTTATACAAAA 100 105
CHC44_RS24230 NONE
CHC44_RS19260 NONE
CHC44_RS19265 3761568 .. 3761582 +  -2.9  -4.61873   ACCAACATTAAGTTC               TTAAG GTTCA CTTAA               TTTTACTTTGTCACG  65 97
CHC44_RS19270 NONE
CHC44_RS19275 NONE
CHC44_RS19280 3765336 .. 3765346 +  -8.2  -4.08064   ATGTCCGACGCCGCT                 GGCG TTG CGCC                 TTTTAGCGGACGATT  77 343
CHC44_RS19295 NONE
CHC44_RS19300 NONE
CHC44_RS19305 3768747 .. 3768758 +  -3.6  -2.94232   TGGATAAAGGTTAAA                CGGG CTGA CTCG                 CTTCTTTAGCAAAAA  44 133
        lpxO 3769809 .. 3769842 + -14.6  -3.55219   AGCCTCCTCTGAAGC     CGGGCCGCGGTATGG AACTG CC-TGCCGCGGCCTG     TTCTATCCTGGCGTT 100 29
CHC44_RS19315 3772405 .. 3772424 + -13.6  -5.64274   GCATTTTCCCTATAA            CAGCCTCC GCCC GGAGGCTG             TTTTTTTATCCATAC 100 123
CHC44_RS19320 3773367 .. 3773384 +  -4.1   -5.0538   TTTGCCCAGCACATC             GCGCT CATAGGCC AGCGC              TTTTTTGCGGTCAAA  77 219
         acs 3784176 .. 3784191 +  -3.2  -2.80816   CGAAAGACGCAGGGG              GACCTC TGGA GAGCTC               TGTGATGAATGACCA  43 251
CHC44_RS19370 NONE
        actP NONE
CHC44_RS19390 3788323 .. 3788380 +  -6.2  -4.55287   GGCGCAAGCACCTTA TCCGGCCTACTTGTAGGCCCGGTAAGC ATGGC GCC-ACCGGGCCTACAAGGACTACTGA TTTTCTATCAGTAGC  76 70
CHC44_RS19400 NONE
CHC44_RS19425 3793702 .. 3793729 + -11.2  -4.30719   CGCCTGTAGGGCGTC        TGCCCGCGTATC GTCA GAGGCGCGGGCG         TTTGTTGTAGCCAGG  93 32
CHC44_RS19435 3796334 .. 3796354 + -11.2   -5.4505   TTAAATGACAAAAAA            GACCCGTT TGTGC AACGGGTC            TTTTTTATTAAGCAG 100 233
CHC44_RS19470 3821114 .. 3821140 +  -5.9  -3.12668   CTGGCCACTCTGATC        GGTCCACTTGCG GGTA CGCAATTG-ACC         TTCGATATACACCTG  52 302
CHC44_RS19485 3824460 .. 3824495 +  -9.7  -4.77036   ATGCTCAAATAACCT    TCACGCCGCTTTCCG ATTCGC CGGGAAGCGGCATCA     TTTTTCCTCATCCCA  91 29
CHC44_RS19490 NONE
CHC44_RS19495 3825557 .. 3825571 +  -4.2  -4.07885   GGCGTAACAACTCTG               CCAGTT CCG GGCTGG               TTTTGAGAGAGGCTG  62 214
CHC44_RS24240 3827521 .. 3827535 +  -3.4   -4.2349   CGGACTGGAGTAAAT               TCGGCG CAC CGTCGC               TTTTAGCTGTCCCAG  62 283
CHC44_RS19530 3832139 .. 3832169 +  -5.6  -5.80364   TAATAGCTCTGCAAA      GAAATTGGGCTTCC ACCCG GGAAGCCC--TTTC      TTTTTTTGTTCGGCT 100 38
CHC44_RS19550 3835981 .. 3836007 +  -5.3  -2.94422   ATATTACCAGCGATA        GTTGTT-AC-GGG TTT CCCAGTCAACAAC        CTCTTTTTCCGCCTG  50 137
CHC44_RS19580 3841503 .. 3841533 +  -6.1   -2.6472   TAAGCCAGTGCCTGA      AATGCCCGATG-GC GTAA GCTCATCGGGCAAC       TGATATGACGTATTG  53 38
CHC44_RS19610 3848367 .. 3848378 +  -5.8  -3.30124   CCTGTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACAA  56 50
CHC44_RS19615 NONE
CHC44_RS19620 3851004 .. 3851019 + -10.4  -5.66684   TATGGTCGTATTTTG              GCGCTC TTCG GAGCGC               TTTTTTTATGCGTTA 100 106
CHC44_RS19655 3859553 .. 3859565 +  -4.8  -4.13767   CATTCTGTCAGCAAT                TGCC TGACC GGCA                TTTTCGGCTGACGCG  62 375
CHC44_RS19665 NONE
CHC44_RS19670 3861130 .. 3861142 +  -4.8  -2.63723   TTATTTGCAATGGGG                GCAG GCTAG CTGC                ATTCATTAATCAGAG  48 4
CHC44_RS19675 3861476 .. 3861514 + -12.7  -4.75954   CAACGAGGTAACCAT  TAAACAAATCCCCGTCGT TTAT ACGCCGGGGATTT-TTTA   TTTGTTTTAACTTTT 100 23
CHC44_RS19680 NONE
CHC44_RS19685 NONE
CHC44_RS19690 NONE
CHC44_RS19695 3864233 .. 3864252 + -13.6  -3.53091   TTGGCGGTTAATCAC            TTCGGGGC TACG GCCCCGAA             TTTAACACGACGAAT 100 30
CHC44_RS19700 NONE
CHC44_RS19705 3864673 .. 3864695 + -12.7  -3.72576   TAAACACGAATACGA           CTCGCAGGC TTAAT GCCTGCGGG           TTTCCTGACCCAAGC 100 13
CHC44_RS19710 3867130 .. 3867145 +  -2.6  -3.02144   ACGGCGCCGGGAGTA              C-GCATA ATG TATGCCG              TATTAGGCGAAATAG  43 19
CHC44_RS19715 NONE
CHC44_RS19720 NONE
CHC44_RS19725 NONE
CHC44_RS19730 NONE
CHC44_RS19735 3870346 .. 3870356 +  -5.4  -3.09933   GATCCTCTCAGTTTT                 GTCT GGT AGAC                 TTCGCTGAATTACAA  52 59
CHC44_RS19740 3870744 .. 3870757 +  -3.9  -2.56343   TGTTTTCAGGAATGA               GAAAT GAAA ATTTC                ATTAGTGGTTCCCGT  44 19
CHC44_RS19745 NONE
CHC44_RS19750 3873199 .. 3873217 +  -4.7  -4.36595   TTCTGTAGGCAAAGG             TGAAATT ACAGC AATTTCA             TTTTAACTTTACGTA  66 1
CHC44_RS19755 NONE
CHC44_RS19760 NONE
CHC44_RS19765 NONE
CHC44_RS19770 NONE
CHC44_RS19775 NONE
CHC44_RS19780 3878102 .. 3878124 + -12.7  -3.15354   CGATTGTTGAATCTC           TCGCCGGGT ATAAA GCCCGGCGA           TGTTGAATTAAAGTA  86 31
CHC44_RS19785 3879037 .. 3879064 + -13.4  -2.86449   TAGAGCGTTTAGTAA        GGCCCGGTAGCG TAAA CGCTATCGGGCA         TCGTTCTCGTAACAT  86 169
CHC44_RS19790 NONE
        panS NONE
CHC44_RS19800 3881765 .. 3881778 +  -2.3  -4.60258   ACGCCGACGCGCGGC               AGACG TTAA CGTCC                TTTCTTCTTTCGTCC  64 17
CHC44_RS19820 3884140 .. 3884191 + -18.8  -3.79043   CCAGGCCACATTGAA TGCCGAATGGC-GGGCCTACGCGCA TGT TCTCCGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 43
CHC44_RS19835 NONE
CHC44_RS19840 3891706 .. 3891722 +  -4.3  -3.32698   CGGCGGCCAGCTGAC              GAATGGC GTT GCCGTAC              TCTTCTATCGCGTCG  51 405
CHC44_RS19865 3898157 .. 3898198 + -17.5  -3.76224   CCGACAGACCACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA  TTTGATGCCTGGCAG 100 310
        purH NONE
CHC44_RS19900 3906779 .. 3906806 + -10.4  -5.00616   GTAATGCCCAATTGA        CGGGCGGCTTCG GTTT TGTTGCCGCCCG         TTTTTTCCAGCGCCG 100 71
CHC44_RS19915 3910178 .. 3910201 + -16.8  -3.08679   GGTAAAGCATGTTTG          CCGAATGGCG GCTT CGCCATTCGG           TATTCCATCAAAAGG 100 36
CHC44_RS19950 3915174 .. 3915196 +  -6.8  -3.75378   ACGGGTAGTTTACTT           CAGCCCCCTC TTC GGAGGGGCGG           TTATCTTGTCGGAGT  66 55
CHC44_RS19955 3917398 .. 3917413 +  -3.2  -2.90615   CTCAAACGGGAGGAA              GCCTGA TGTA TCAGCC               TGATTTCCCAACCGT  44 20
CHC44_RS19960 NONE
CHC44_RS19965 NONE
CHC44_RS19970 NONE
CHC44_RS19975 NONE
CHC44_RS19980 3920925 .. 3920948 +  -8.8  -6.14618   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC 100 78
CHC44_RS19995 3922301 .. 3922328 + -12.8  -3.61764   TATCCAGCATGAAGC        TGGTGGAGGG ATAAATGC CCCTCCACCA         TTTAACGATTACTCG  95 359
CHC44_RS20075 3936884 .. 3936897 +  -5.3  -2.62983   TCAGGGATGGCCCTC               GTTCA TCGC TGAAC                TGATGTAGCAATAGC  48 189
CHC44_RS20085 3937889 .. 3937906 +  -8.4  -5.27779   AAATAACAGAAAAAA             GGGGAG CACCGA CTCCCC              TTTTTTACTATTCGG  95 35
        trmA 3949814 .. 3949827 +  -4.5  -3.53811   TCCGCGGTGTCCTGC               TTGCG GTTA CGCAG                TTTAAAGCCAATCCA  54 91
CHC44_RS20150 NONE
CHC44_RS20155 3952440 .. 3952451 +  -5.8  -2.52516   CCATTGCGCCACGGA                TGGC CTCT GCCA                 GTTGCTCATAACGGC  48 61
CHC44_RS20185 3958297 .. 3958315 +  -7.4  -3.85698   TTCGCAGTAATTGAC             GCCACG GGTTTTA CGTGGC             TTTATAAAAGACGGC  68 211
CHC44_RS20190 3961221 .. 3961233 +  -6.3   -4.0056   CAATATATTCCTGTC                TGCAT TTT ATGCA                TTTGTAAATCTTTCT  66 115
CHC44_RS20195 3963206 .. 3963230 +  -2.1  -3.49777   TTCGACGTTACTGTT          TCCTCTGTT TGCGATC GGCAGGGGA          TTATCATGTATCACG  47 156
CHC44_RS20200 3964578 .. 3964591 +  -8.1  -4.27441   ACTGATGAAACGGTA               GCAGG TGAA CCTGC                TTTATTCCTAATGAT  81 516
        ptsP NONE
         fsa NONE
        gldA 3973693 .. 3973716 +   -14  -3.67976   ATAAGGTCTGAGCAA          TACTCCTGAC GATA GTCAGGAGTA           TTTCAGCTTGCTGAC 100 37
CHC44_RS20245 3974764 .. 3974777 +  -5.9  -3.69216   CAAACACCAGATCGG               CGCGG GTTG CCGTG                TATTTTACCTCGCCA  60 226
CHC44_RS20265 3980997 .. 3981009 +  -3.5  -3.12847   TAAAATGGCCCTTCG                TTTTA AGT TAAAA                TTGGCTATAAACGTT  45 155
CHC44_RS20270 NONE
CHC44_RS20275 3983355 .. 3983367 +  -4.7  -4.08216   CACCATCTGTTCATT                CAGCG CGT CGCCG                TTTTCGAAAAAGTGA  62 420
CHC44_RS20290 3987263 .. 3987289 +  -6.5    -5.055   TACTGATAGCAAAGC         ATGCGGTCAGA ACGCC TCTGGCCGCGC         TTTTTTAACGATTCC  83 35
CHC44_RS20295 3989520 .. 3989547 +  -9.8  -2.72227   AGATAGTAAAAGTAA        AACAGGCGGAAG CTAA CTTCCGCCTGAA         TGGTTAAAACGTATT  69 45
CHC44_RS20300 3990376 .. 3990389 +  -9.5  -5.93809   TAGAAAACAAAAAAA               GCGCC CTGC GGCGC                TTTTTTTTCTGGCGG 100 38
CHC44_RS20310 3993070 .. 3993080 +  -2.6    -3.494   AAGATCCATCACACT                 TTTT ATG AAAA                 TTCTGTAACCGCTTC  48 72
CHC44_RS20315 NONE
CHC44_RS20320 3995323 .. 3995367 +  -2.2  -3.14132   AATCTCCCCCATCTA TACTTGCATTATG-CCCCGTAC GCC GTACGGGGCCGCAATTC-AGCA TTAGTAACCAAGGGG  44 50
CHC44_RS20325 NONE
        hslU 3997292 .. 3997309 + -11.3  -5.07486   TTTCATCACTGTTGA             TGGGGCT GAAA AGCCCCA              TTTTTATTGGCGCTA 100 56
CHC44_RS20335 3998268 .. 3998282 +  -5.8  -3.08032   TTTAACTGACAAATA               TCAATT AAC AATTGA               TGATTTTGCCAACAG  52 36
        rraA 3998844 .. 3998859 + -11.8   -5.3236   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 34
CHC44_RS20350 NONE
        glpK 4002088 .. 4002117 +  -9.3  -2.66602   CGCCATCCGGCAAAA       TCTTTGTGCGGAG GCAA CTCCGCACACACA        TCAATTATTCCCTCC  66 44
        glpX 4003212 .. 4003233 + -10.9  -2.74122   TTGTTAGTTAGAGCC           TTCCAGCCT CGCG GGGCTGGAA            ATCTTTCTCCTGACG  74 46
CHC44_RS20365 4004520 .. 4004536 +  -3.6  -3.65351   CAAATCCAGAAATCA              CGGCGT CCGAT ACGCCC              TTTAAATGAGAATAA  53 511
CHC44_RS20375 4005321 .. 4005340 +  -5.6  -2.57354   CTGTTTCACAGACCA            TGCTGCTC TGAC GAGCGGCC             ATCTTCCTTAATTCG  50 80
CHC44_RS20380 4006222 .. 4006236 +  -2.7   -4.0162   GGCCTGATAAGGTAA               AGCCG CCATC CGGCA               TTTATGCTGTGGAGG  56 101
CHC44_RS20420 NONE
CHC44_RS20425 NONE
CHC44_RS20430 4016257 .. 4016269 +  -6.3  -2.54276   ATGCAATATCAAGCT                GTCAT TTG ATGAC                CTGTTGGTTCAAGAT  53 114
CHC44_RS20485 4025888 .. 4025905 +  -8.3  -5.16071   CCCTTTAAAGCGAAA             ACCCCGC AATC GCGGGGC              TTTTTGTTGGTGGTT  91 45
CHC44_RS20615 NONE
CHC44_RS20620 4046508 .. 4046525 + -12.7  -4.72272   ATAATTCCCCCTCAA             GCCGCCA GTAT TGGCGGC              TTTTTCATACCCCAC 100 37
CHC44_RS20625 NONE
CHC44_RS20630 NONE
CHC44_RS20635 4049829 .. 4049847 + -11.8   -3.7659   GATGTAATAAAAACG             GCCTCATT AAA AATGAGGC             TTATCGTTTTATTAT  93 66
CHC44_RS20675 4054733 .. 4054744 +  -2.2  -4.31835   AAGATGGTGAATACA                GCGCC GGA GG-GC                TTTCTTATGGCAATT  59 77
CHC44_RS20680 4056130 .. 4056140 +  -8.2  -3.79623   TTTTTCTGCCTGAGC                 GCGC ACA GCGC                 TTTCATCAAATTTTT  71 424
CHC44_RS20690 4057259 .. 4057273 +  -2.8  -3.53091   ATCTGATGGTTTCCG               CTTCAT GAT AGGAAG               TTTAACCGCGCGCAT  48 18
CHC44_RS20695 4058643 .. 4058664 + -15.9  -5.36441   CGAACCTAAAAACCA           TCGGCCTGC GAAT GCAGGCCGA            TTTTTTATCTCGCCG 100 32
CHC44_RS20715 NONE
CHC44_RS20720 NONE
CHC44_RS20725 4063653 .. 4063665 +  -2.6  -3.28712   ATCTCGTTGCCGGAT                GGCG ATTCG CGTC                TTATCCGGCCAACGC  46 59
CHC44_RS20735 4066126 .. 4066159 + -10.3  -3.55444   TAATCGCTTTGATTA     CTGAGATGACGCC ATTGGCTC GGCGTCATCCCGG      TTTCCCGCGTGAACA  77 38
CHC44_RS24250 4067306 .. 4067320 +  -2.8  -3.60296   GTAACGTTGCGGCGT               CAGC CCGGTAT GCTG               TTTAAGCTGACGATG  50 168
CHC44_RS20750 NONE
        rhaA 4070995 .. 4071046 + -13.8  -3.30243   GGCCGGATAAGACGC CCGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCGC TTATCCGGCCTACGT 100 60
CHC44_RS20760 4071947 .. 4071958 +  -7.2  -3.80625   ACCTCCCAACTCAAC                GCCG GATG CGGC                 TTTGCCTTATCCGGC  68 42
        fucO NONE
        rhaM 4073518 .. 4073554 +  -3.6  -5.49579   TCTATCTGCAGTAAG   TCGTGTGCCCGAT-GGC GCAA GCTTACCGGGCCTACGG    TTTTATTTTTTGTCG  86 27
CHC44_RS20780 NONE
CHC44_RS20785 4075507 .. 4075521 +  -8.5  -5.10208   ACATAAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  91 296
CHC44_RS20795 4077980 .. 4077994 + -12.8  -4.66163   GCGACTGCCGAAAAA               GCGCCC CAG GGGCGC               TTTTTCGCTCGAAGT 100 99
CHC44_RS20805 NONE
        fdnG NONE
        fdxH NONE
CHC44_RS20820 NONE
CHC44_RS20825 4084740 .. 4084766 +  -5.8  -2.79098   TAAGTTCTCTGGTAT         ACCGGCTAGC AATCTAC GTTAGCCGGA         TCATTGCTCAATAAC  50 38
CHC44_RS20840 4086573 .. 4086589 +  -8.1  -3.96624   ACGTTGCACTAAATT              GTTTTCA GGT TGAAAAC              TTTGTAATGGAACTA  72 75
CHC44_RS20845 NONE
CHC44_RS20850 4087559 .. 4087573 +  -2.8  -3.62275   AGCGACCCCAAATCA               GCCA CGGCGTT TGGC               TTTCCGCTAATGGGT  51 221
CHC44_RS20885 NONE
CHC44_RS20890 4094133 .. 4094145 +  -3.3  -3.14564   TCGTCGATGAAATGA                TGGCG AAA CGTCG                TTAATACGAGGATGA  46 9
CHC44_RS20895 NONE
CHC44_RS20900 NONE
CHC44_RS20905 NONE
CHC44_RS20910 4099792 .. 4099805 +  -9.5  -4.08064   AACAATAAAATATAA               CGCCC TGCG GGGCG                TTTTGAGAGGCGATT  81 42
CHC44_RS20915 4101252 .. 4101281 +  -4.4  -3.21872   AATTAAACGACGCTT      GCCGCTTTATCCAT CCCG ATGGAT-G-GCGGC       TTCCCTATATTTGAA  50 35
CHC44_RS20920 4102037 .. 4102057 + -10.4  -2.80195   CGAATCAGCATCACA            GCGGGTAG TTGTT CTGCCCGC            TCATTCATCCTGAAT  71 60
CHC44_RS20925 NONE
CHC44_RS20930 NONE
CHC44_RS20935 NONE
CHC44_RS20940 NONE
CHC44_RS20945 NONE
CHC44_RS20950 4107756 .. 4107782 +  -8.6  -4.87665   ACGTGAATAAAAAAA         CCCCGCCGAGCT TTC ATTTCGGCAGGG         TTTTTATCCGTAAGA  89 31
CHC44_RS20960 NONE
        glnA 4111395 .. 4111407 +  -7.7  -2.89965   CCCGGTAGAGTTTGA                GCTGT ACT ACAGC                GTTTAATCGTATATT  61 7
CHC44_RS20975 NONE
CHC44_RS20980 NONE
CHC44_RS20985 4114189 .. 4114212 +  -6.8  -3.93038   AAGATTAATAATTGA          GCGCAAAA CGCTGCTA TTTTGCGC           TTTACTGTTCCGATG  68 59
CHC44_RS20990 NONE
CHC44_RS21010 4117781 .. 4117792 +  -7.2   -2.5294   CCGCTATGCCGGATG                GCGC CGCT GCGC                 GTCTTATCCGGCCTA  57 45
CHC44_RS21025 4122163 .. 4122187 + -14.3   -5.8096   TAAAACATCTTATAA          AAACGCCGGTC AGT GACCGGCGTTC          TTTTTATTTTTTATC 100 10
        mobA NONE
CHC44_RS21050 4125585 .. 4125626 + -17.5  -3.76224   CCGACAGACCACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA  TTTGATGCCTGGCAG 100 281
        fadB NONE
        fadA 4139066 .. 4139084 + -13.1  -5.04385   TTAGTTGCCGTTTTT             CCCGCCC GTCAG GGGCGGG             TTTTTTCACCGTATG 100 181
CHC44_RS21130 4144250 .. 4144264 +  -4.2  -3.52204   GCAGATACGCGGGCT               CGTTGC GTC GTGACG               TTGGTTTCGGCGTAA  52 152
CHC44_RS21180 4153337 .. 4153351 +  -2.8  -5.72118   TCGCCACGTTAGCTA               TGCTTT ACC ACAGCA               TTTTTTATATTTTTT  89 108
CHC44_RS21195 4158581 .. 4158603 +  -4.1  -2.72344   TGATGCCCAGCGTCC          CGGCGTCTAC CTGG GTAG-CGCCA           TAGTTCCACATAAAG  45 119
CHC44_RS21215 4162133 .. 4162150 +  -3.3  -3.28712   GCGAAAATACCCCAG             CG-CGCCG CAG CGCCGACG             TTATCGCCGACAAAC  45 240
        yigI NONE
CHC44_RS21240 4166992 .. 4167024 + -14.4  -3.75532   GTAAGCATTAAATAA      TAAAATGGCAGCTA TTATC TGGCTGCCATTTTA      TGTTATTTCTTCTTA 100 30
CHC44_RS21250 4167891 .. 4167921 + -16.2  -3.63922   TGATGAAGAACTTCC       AACGGACTGGCGGT TAA ATCGCCAGTCCGTA       TATTTTACAGCCAGT 100 38
CHC44_RS21260 4169345 .. 4169355 +  -6.8  -3.60971   CGGCAATATGAGAGC                 CGGT CAA ACCG                 TTTCCAGCTTCGCAT  64 72
CHC44_RS21300 4176094 .. 4176112 +    -6  -3.29739   GCTGGGTTTTATCCT             TTACCGCT CAC AACGGTAA             TTCGTATCGGTTCCA  59 7
CHC44_RS21305 4176510 .. 4176534 + -12.1  -3.25823   TTCGTTGATTTATTT          GCCGGATGCGC TTT GCTTATCCGGC          TTACTGTAGGCCCGG  83 33
CHC44_RS21315 NONE
CHC44_RS21320 NONE
CHC44_RS21325 4182367 .. 4182395 +  -2.5   -4.3587   GCCGCGCCGCAAGGA        GAATAATGATGCT AAA AGTATTATTGCTC        TTTGTGTTGTTGCTC  60 20
CHC44_RS21330 4183941 .. 4183957 +  -9.3  -4.16943   ACGCGATTGTCATCC              CCCCGCC GCT GGCGAGG              TTTTAGCGTGTCGCC  82 395
CHC44_RS21420 4199402 .. 4199420 +    -6  -4.08216   TCCATCGCGTCAATT             TCACCCAT CGG ATGGATGA             TTTTACGCAGGATCC  67 105
CHC44_RS21435 NONE
CHC44_RS21440 NONE
CHC44_RS21445 4204413 .. 4204423 +  -6.8  -3.66178   TTCGCTCGCTTTGCC                 GCCA TCA TGGC                 TTTCAGATTAGCCAG  64 87
CHC44_RS21465 NONE
CHC44_RS21475 4209905 .. 4209927 +  -4.8  -3.83771   ATACGGCTAAGCATA           TTCACCAGAG CAT CAATGGTGAA           TTTGCTGCATTTCTT  58 77
CHC44_RS21520 4219321 .. 4219333 +  -6.2  -5.15167   GCTGGCGTAAAAAAA                GGGC ATTAC GCCC                TTTTTATTAATCATC  83 31
CHC44_RS21530 4220708 .. 4220727 + -10.8  -4.06419   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG  86 100
CHC44_RS21565 NONE
CHC44_RS21570 4228954 .. 4228972 +  -6.7  -2.52946   CCGCCCGATACCCTT            CCAGCCGC AAAC GCG-CTGG             CGTTTTGTCCAGCGG  51 395
CHC44_RS21610 NONE
CHC44_RS21615 4239926 .. 4239944 + -10.2  -2.71712   CGACTGCCCAATCCC             GCCGCCGA TGG TCTGCGGC             ATTTCGCCGCGCAGC  66 144
CHC44_RS21625 NONE
CHC44_RS21630 4242227 .. 4242242 +  -6.8  -3.92373   ATCTTCTTTTTAATA              G-CCCGG ATC CCGGGGC              TTTCTCCATCGGCTA  68 306
CHC44_RS21635 4244266 .. 4244291 +  -8.9  -3.04089   CCTACAAATTTGTAG         GCCCGATAAGC GAAA GCGCATCGGGC          ATTTGATTATTAACA  68 77
CHC44_RS21640 4244999 .. 4245016 +  -3.4  -3.30038   AAAAATCGACAGGTA             TAACGC ATTTCA GCGTTG              TTACATTTAACTCTG  48 84
CHC44_RS21645 NONE
CHC44_RS21650 NONE
CHC44_RS21655 4247040 .. 4247052 +  -3.3   -3.4052   CGTGATGTTCGCTGT                CGCGT AGT AAGCG                TTGCTTGAATTAAGA  48 19
CHC44_RS21660 NONE
CHC44_RS21665 NONE
        atpA NONE
CHC44_RS21675 4250590 .. 4250600 +    -4  -3.73968   GGGGCCGCCGCGGTT                 TAAC CAG GTTA                 TTTCGTAGAGGATTT  55 23
        atpD NONE
        atpC 4252463 .. 4252482 +   -10  -6.26417   CTTGAAAGCATAAAA            CCAGTCTG ATTG CGGACTGG             TTTTTTTTTATCCTC 100 47
CHC44_RS21690 4253353 .. 4253365 +  -2.7  -3.05935   ATATTTTGCGGATTT                TTATG TCG CGTAA                TTAAGTAAAAAATAT  43 9
CHC44_RS21695 4253569 .. 4253595 +  -2.8  -3.35963   GAAAATGATTCATTA         GCAGGCGGGGAT TTT ATCCCGGTGAGC         GTTTTATCCTTCTTC  46 33
        glmU 4255125 .. 4255139 +  -5.6  -2.83271   GGATAAAATAATCCT               CCGCTC CAT GAGCAG               TACTTATAAAAATAA  50 91
        glmS 4257102 .. 4257119 + -12.7  -5.60993   TAGTACCAGGCAGAA             GGCCGTC GATA GACGGCC              TTTTTTTGTGCGCCG 100 50
CHC44_RS21715 4259877 .. 4259891 +  -3.4  -2.96611   GCTGTTCCAGAAAGC               CGCGGC CTG GTCACG               TCTGTAACATTTTTT  44 4
CHC44_RS21720 4261338 .. 4261364 + -12.2  -5.67283   CATCTCCCCCTGCAG         GCTGGTCTGGTG TCT CCCCGGGCCAGC         TTTTTTATTTCCATT 100 43
CHC44_RS21725 4262628 .. 4262641 +  -3.1  -3.72695   ATCCGGCAGGGGCAA               CGTCGT AAA ACG-CG               TTTAATGGAAAGAGT  53 127
        pstC NONE
        pstA 4264523 .. 4264548 +  -8.3  -3.10175   TTAAAGACATTGTAG         GCCTGATAAGCG TAG CGCC-ATCAGGC         ATTATTTTACGGCGT  66 37
CHC44_RS21740 NONE
        phoU 4266172 .. 4266198 +  -8.7  -2.84878   GTACAGATGCTGTAG        GCCGGATAAGCG TTAG CGCC-ATCCGGC         ATTTCAGTTAACGCG  65 86
CHC44_RS21755 4268387 .. 4268409 +   -17  -4.58283   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGTGAGGG           TTTTTAACGAACTTA 100 35
CHC44_RS21805 NONE
CHC44_RS21810 4279287 .. 4279302 +  -2.4  -2.75844   TAGAATCTGAAAAGG              GGCTGG TTTA CTTGCC               ATTTCGCCTCCCGGC  40 38
CHC44_RS21815 NONE
        gyrB 4282946 .. 4282981 + -12.6  -2.77523   ATATTTAACCTGCCT    TAAT-CCCCGGCCTACC GCT GGTTGGCCGGGGCATCA    TGATGTTCATCGACA  82 33
CHC44_RS21840 4287624 .. 4287640 +  -9.4  -5.82281   ATACGCGCTTAACGA              CCCGCA CTTGC TGCGGG              TTTTTTTATGTCTTT 100 62
CHC44_RS21845 NONE
CHC44_RS21850 NONE
CHC44_RS21855 NONE
CHC44_RS21860 4291193 .. 4291203 +  -2.4  -2.82327   ACAAACGTCGCCCTC                 CGGG CAA CCCA                 ATTTAAATATAAAAA  40 60
CHC44_RS21865 4292722 .. 4292754 +  -6.1  -5.04601   CCCGACAGGCTTCGG      TTGCCTGCGTCATCC CCA GGCTGGCGCAGCCGC      TTTTTAATTTATGCG  84 167
CHC44_RS21875 4296666 .. 4296689 +  -3.9  -3.18681   GTAAGCTTAATGGCT          TCAC-CGTTG TGCTC CAGCGTGTGA          TTCATCACGTTCAGG  47 230
CHC44_RS21885 NONE
CHC44_RS21890 NONE
CHC44_RS21895 4301685 .. 4301702 +  -5.7  -2.96984   TTAGCCAATTGTAAT             TATTGAT ACCA ATCAATA              TCTATGATGGGTTTG  51 103
CHC44_RS21900 NONE
CHC44_RS21905 4303796 .. 4303815 +  -6.3  -2.86177   CCGCCGCCTGGTGCT            GACCGGC GGGGGG GCCGGGC             TGTGATGTGGCGTGT  55 1
        ccmB 4304469 .. 4304495 +  -2.9  -4.39386   CGCTGCGCCTCAGCG        TG-CAGTAGCGC CCCG GCGCGACGGACA         TTTTACTGGTTTCAG  60 18
CHC44_RS21915 4305259 .. 4305271 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
CHC44_RS21925 NONE
CHC44_RS21930 NONE
CHC44_RS21935 NONE
CHC44_RS21940 4309558 .. 4309570 +  -7.7  -3.21593   CGTGTGCAGTATGAT                GACGA GCA TCGTC                TCTTATCAGGACATC  64 117
CHC44_RS21945 4310839 .. 4310873 +  -2.1  -2.82775   GAGGCATCTTCGCCG    GGGGGATGACGGCATT GGTC ATTTTCGTC-TCCTCC     TCGCTTTTCTCTACG  40 50
CHC44_RS21955 4311880 .. 4311896 + -11.5  -2.80113   TAACTGATTCCGTCG              GGTCGCG TTG CGCGGCC              TGTCATCCCATGCTC  77 34
CHC44_RS21960 4312425 .. 4312446 + -17.3  -5.31275   TAAGCTCCTTGCCTT           GCCCCGCCA GAGA TGGCGGGGC            TTTTTTGTGCTACGA 100 41
CHC44_RS21965 4314259 .. 4314272 +  -9.5  -2.66274   TTGGGGAATGGGTTA               GCGCC TGAT GGCGC                GTTGCTTATCCAGCC  68 25
CHC44_RS21970 NONE
CHC44_RS21975 NONE
CHC44_RS21980 4315948 .. 4315988 + -11.9  -3.35046   CACAGGCCTGATAAG C-GTAGCGCCATCAGGCG ATGGCG TGCCGGATGGCGCTGCCG  TCTTTCCGGCACTGA  85 44
CHC44_RS21995 NONE
CHC44_RS22000 4321476 .. 4321493 +  -5.5  -4.42386   GGTAACAGTTAAATG             CGCCGTT GCCA AACAGCG              TTTTATAGCTGGCGA  70 515
CHC44_RS22025 4324101 .. 4324125 + -10.7  -5.63517   CACACGATTCCAAAA         CCCCGC-CGG CGCAAA CCGGGCGGGG          TTTTTTGTTTAAGAC 100 52
        ilvB NONE
CHC44_RS22035 4326406 .. 4326436 +  -5.4  -2.73159   CAGCTCACGCCAAAA       TGTTCATGTACGCC GCT GGCGGAAATAAACA       CTTTGCGCGGATTGA  47 268
        rbsK NONE
        fucP NONE
CHC44_RS22055 4330590 .. 4330614 + -12.2  -5.96219   AGGCTTGAACAGCCG          CGCGCTTATC GTTAA GGTAAGCGCG          TTTTTTTTATCCATC 100 48
CHC44_RS22060 NONE
CHC44_RS22065 4332712 .. 4332724 +  -5.5  -3.27525   CGCGGGTGAGCGTCT                CGTTG CCC CAGCG                TTACGTTTAAGGAAG  54 3
CHC44_RS22070 4334125 .. 4334150 +  -2.5  -4.37534   AGAAATTTTCCCGGT         TTTGCCTG-GAC GCT GTCGCAGGCCAC         TTTTCCTGTGGATTT  60 78
CHC44_RS22075 4335630 .. 4335648 + -13.1  -5.31456   ATTTGGTAACGTTTT             GCCCGGC TTAAC GCCGGGC             TTTTTTATGCCTTGC 100 49
CHC44_RS22080 4336452 .. 4336479 + -12.9  -2.94356   AGACTTACAGCTCAT        CATTTCCGTGA CATATA TCACGGAAATG         TGATCTTGTTTTGAA  86 226
CHC44_RS22085 NONE
CHC44_RS22090 NONE
CHC44_RS22095 4338109 .. 4338121 +  -3.3   -2.8552   TAGTTTCAATCCTTA                AAGGC CAA GCCTG                ATTTCATAAATAAAA  44 12
CHC44_RS22100 NONE
CHC44_RS22105 NONE
CHC44_RS22110 NONE
CHC44_RS22115 4342611 .. 4342631 +  -9.1  -4.35327   CGCGCTATGAATCGC            TTCAAAGGC AGG GCTTTTGAA            TTTAGTTTTTGCTGA  84 401
CHC44_RS22130 4344489 .. 4344507 +    -3  -5.42259   TTATGCTCTGCGGTG             GCGGCAAA CCA TTCTCCGC             TTTTTTTCACCGTGC  84 113
        dagR 4349253 .. 4349273 +  -3.1  -4.48713   TCCTTTTACTAGCGG            GGCTTCGCG CCT CGCCAGACC            TTTCTTCTTCCTCGC  64 41
CHC44_RS22150 NONE
CHC44_RS22155 NONE
CHC44_RS22160 NONE
CHC44_RS22165 NONE
CHC44_RS22170 NONE
CHC44_RS22175 4354110 .. 4354131 +  -6.5  -3.39521   AGCCGTCAGTGATTC           CCTTTCGAG CCTC CTCGCAGGG            TTAAATTTTCCTGAA  59 163
CHC44_RS22180 4355459 .. 4355469 +  -6.8  -3.62054   CAGGCTGCCGCTCAC                 CGCA AAG TGCG                 TTCCTTCTTTAGCGT  62 335
CHC44_RS22190 NONE
        mgtA NONE
        mgtR 4360512 .. 4360524 +  -5.5  -4.33274   TAGTTGTTCTTTTTA                TGGCG GGG CGCTA                TTTTCATGGTATCCC  70 179
CHC44_RS22200 4361224 .. 4361244 + -14.1  -3.66803   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGCCTCTTCAGG 100 211
CHC44_RS22210 NONE
CHC44_RS22215 NONE
CHC44_RS22220 4364123 .. 4364141 + -14.6  -3.28304   CGCTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGT 100 85
CHC44_RS22265 NONE
CHC44_RS22270 NONE
CHC44_RS22275 4375505 .. 4375527 +  -9.9  -4.22948   TTTTAACGAAATAAG           CCATGCATC CATAA GGTGCATGG           TTTTGCATGCGTTTT  86 72
CHC44_RS22305 NONE
CHC44_RS22310 4383762 .. 4383777 +    -6  -3.30124   CTGAATCGCCGGATG              GCGCCG TGAG CTGCGC               TTATCCGGCCTACAA  59 43
        gltS 4388573 .. 4388587 +  -7.1  -3.37796   GGTTTCCGGCATCCA               GCGCT CAATC AGCGC               TTGTGCCTGCTGCGG  58 97
CHC44_RS22355 4396622 .. 4396636 +  -5.6  -2.87211   GATAATTGGCCCTTC               GCCCAT ATC AAGGGC               TATCTGAGCGCCAAT  49 304
CHC44_RS22370 4399255 .. 4399273 +  -2.4  -5.45652   GCATCATAAAGTCCA            GACGGCG ACCTAC CGCC-TC             TTTTTTCTTCAGAAT  85 215
CHC44_RS22385 4400827 .. 4400844 + -11.3  -5.96219   GAAAATTGATTTTAA             GGCGACT GAAA AGTCGCC              TTTTTTTTGTCCGTA 100 32
CHC44_RS22390 4401939 .. 4401966 +    -4  -5.69023   ACCCAGAATCAGCAA        CACAATCAGGCG CAAA CGCGTGCTGGTG         TTTTTTTCATCTTTT  91 424
CHC44_RS22410 4404832 .. 4404845 +  -6.7   -4.2074   TAAGATTCTTTGCGC               GATCC ATCG GGATC                TTTGTCTGTTCGGGA  72 38
CHC44_RS22415 NONE
        rpmG 4405485 .. 4405500 +  -8.2  -5.86976   TTGATGTAACAAAAA              CCTCGC TTCG GCGGGG               TTTTTTGTTTTCTGG 100 49
CHC44_RS22425 4406720 .. 4406746 +  -3.6  -4.15222   TTTTTGCGCCAGCGC         CACACGTTCGTC CAG GGTGAACATGGG         TTTCTTGCCGGGGCT  60 377
CHC44_RS22440 NONE
CHC44_RS22445 NONE
CHC44_RS22450 4411854 .. 4411866 +  -2.7  -4.23758   TTTAATATCTAAAGT                CTTTA GAT TAAGG                TTTTAACTCTGGAGT  58 328
CHC44_RS22460 NONE
CHC44_RS22465 NONE
        rfaJ 4414990 .. 4415000 +  -2.6  -3.05046   CTGGAAGCGCATATC                 TTTA TCG TAAA                 CTTTTCCACAAATAA  43 0
CHC44_RS22475 4415832 .. 4415846 +  -2.9  -3.34369   TGAGATGTAATATTA               GTTAT TGAAT ATAAC               ATTTATTTATAGGTT  46 121
CHC44_RS22480 4416717 .. 4416735 +  -5.3  -5.01422   GATAAATCATTATTT            TGCGTTGC TTCG GCA-CGCA             TTTCTTTTTCTATAA  77 47
CHC44_RS22485 4417962 .. 4417991 + -13.7  -5.82281   CCTGATGATGGAAAA       CGCGCTGATAC CGTAATAA GTATCAGCGCG        TTTTTTTATCTATTT 100 47
         kbl NONE
CHC44_RS22515 4424716 .. 4424730 +  -5.7  -3.58269   GGGGTGAACGACAAA               TCTGC CGGGA GCAGA               TTTGAACGTCGCTTG  59 122
CHC44_RS24285 4425019 .. 4425033 +  -4.4  -3.44325   GAGTTTTGTGCTTGC               TTTTTA CTG TAAAAA               TTAATTATGGCGGCT  54 103
CHC44_RS22525 4426269 .. 4426281 +  -3.3  -5.09426   AGCGCGTAGCGTAGA                CCGGT TGC AGCGG                TTTTTTCGGCTTGCA  76 146
CHC44_RS22545 4430606 .. 4430624 +  -3.9  -3.13504   AATCTGCCTCTGGTG            CGCGGTAA GTGA TTACC-CG             TCGTTTTCATGGCGC  48 14
CHC44_RS22550 4430930 .. 4430944 +  -3.5  -3.14878   CGCTGGATGCGCGTG               GTGGA CTGGA TCCGC               TGTTGCGTTAAGGCG  46 0
CHC44_RS22555 NONE
CHC44_RS22560 4432509 .. 4432538 + -10.1  -4.39426   AACTGTTTGCATAAA       CGACCCAACCCG CACAGAA CGGGTTGG-TCG       TTTTCTGCCCGTCTG  87 49
CHC44_RS22565 4433842 .. 4433865 +    -3   -3.6502   AACAGGCAGTTTCCG          CGCGACGGTA AGGC TATAGCCGCG           TTTGAGTAGCCAGTC  51 483
CHC44_RS22585 4437656 .. 4437669 +  -5.9  -3.96148   AGCTTACGGCGCTAT               GGGCG GGCG TGCCC                TTTGTCGTCAACGCA  65 311
CHC44_RS22630 4448733 .. 4448743 +  -4.6  -3.34398   CCACAGCGTATTTCA                 CGGC ATA GTCG                 TCTTTGCGAAACACC  51 409
CHC44_RS22650 NONE
CHC44_RS22655 NONE
CHC44_RS22660 4456679 .. 4456699 +  -4.7  -5.69262   TAAATAACAAATGAA            GCAATACAA TTA TTGCGTTGC            TTTTTATTTTTCTGG 100 52
CHC44_RS22670 4459793 .. 4459807 +  -4.2  -4.00526   ACAACGCCTGATGCT               GCGC ATCCGCG GCGC               TTTGCTTCTCGCCTT  60 330
CHC44_RS22680 4462739 .. 4462750 +  -2.2   -3.9941   GGTTGCAAACTGAAT                GC-CC AAT GGCGC                TTTGCTTATCGGGCC  53 68
CHC44_RS22735 4472923 .. 4472944 +  -4.5  -4.02534   AGACAGCTCGCCAGG           TTTTATCAG GCAT CTGACAAAA            TTTGTCCGTTTGCGT  61 40
CHC44_RS22740 4473565 .. 4473575 +    -4  -4.56775   GGCGCGTTCTATCTC                 TTCT GCC AGAA                 TTTTTACGCCCGCCT  69 92
CHC44_RS22755 4478439 .. 4478456 +  -5.5  -3.76492   TGAAATCCCAACCGC             GTCCAGC ACCT GCTCGAC              TTTAATGCCCTTACA  58 338
CHC44_RS22765 4479681 .. 4479691 +  -3.2  -2.95093   AGGAAATTCCAGTAT                 GACG TTA TGTC                 GTTTACTTGCCGTCT  44 65
        xylA 4481099 .. 4481126 +  -9.8  -2.78679   CCTGTAGTCGTGATT        AGCCCGGTAAGCG TAG CGCT-GCCGGGCG        CTTTCAGTAAAGGAA  69 74
CHC44_RS22775 4482612 .. 4482637 + -10.5  -3.61922   TGTCATAAGTCAGAA         TGCCTTTCGGT TTTG GCTGAAAGGCA          TTTCCCGTAAATATT  78 33
CHC44_RS22780 4483130 .. 4483147 +  -9.9  -3.61609   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTGTCGTTTAGCTAA  77 23
CHC44_RS22790 NONE
CHC44_RS22795 4484642 .. 4484658 +  -5.1  -3.10597   CCTGGTGAGGTGTGA              TGCCG CGAAATC CGGCA              ATTTTCGCTAAACAA  51 49
        glyQ NONE
CHC44_RS22805 4487771 .. 4487786 +  -6.8    -5.626   TTAAATAAACAAAAA              CCTGCT CTCG GGCAGG               TTTTTTTATAACATA 100 49
CHC44_RS22810 4488690 .. 4488702 +  -4.1  -4.38712   TGTTCTACAAGTAAC                TCTCA CAA TGAGG                TTTTATGAAAATCAG  64 180
CHC44_RS22815 4489165 .. 4489211 +  -2.4  -3.65522   GATGAGGAAATGTTT GGCGAAATAATAGT-CAGCCT GCAGAA AGGCAGCATTGTTCTTTTGCC TTGTTGAACTCAGTA  49 16
CHC44_RS22820 NONE
CHC44_RS22825 4490451 .. 4490477 + -12.4  -3.63148   GTTGGCGTTTTATAG         GCCCGATAAC CCATTAT GTTATCGGGC         ATTTTTTAACGTAAT  95 364
CHC44_RS22845 4493449 .. 4493478 +  -6.4   -3.9941   ATCGACCACCGGGCC       GCGTCCGGCATT AATAAA AATGGCGGACGA        TTTCATTCTGGCAAA  65 339
CHC44_RS22860 4497732 .. 4497755 +  -2.5  -3.81741   CGCCCCGACAAAACG         GGCTTC--CAG TACG CTGACGAAGCC          TTTCAGTTGTCCATT  52 231
CHC44_RS22875 4499536 .. 4499554 +  -3.7  -6.23545   AACACCAGGCGTACA             GCGCGCC CATTT GGTGCTC             TTTTTTTTATTTAGC 100 206
        lpfA 4500428 .. 4500450 + -13.5  -5.00616   TACAGACAATCATAA           TGGCAACGG AAATC CCGTTGCCA           TTTTTTCCAGCGGAG 100 56
CHC44_RS22885 4501169 .. 4501184 +  -3.2  -4.12599   GACATGTTGACACAG              CGCGTT AACT AACACG               TTTTAAAGGATTATT  57 14
CHC44_RS22890 NONE
        lpfD NONE
        lpfE 4505369 .. 4505386 + -12.7  -4.49644   ACGAATAATCACTGA             GGGCCAG TTCG CTGGCCC              TTTTCCATTTTTAGT 100 33
CHC44_RS22905 NONE
CHC44_RS22910 4507448 .. 4507466 + -14.6  -5.76633   GACCAAATTCAGAAA             CCCTGCTC AAT GAGCAGGG             TTTTTTTGTATCTGA 100 36
CHC44_RS22915 4507901 .. 4507924 +  -3.8   -4.1196   TGCGCCTGTAATAGT          TGCTGCGCGGC CTG GTAGC-CAGCA          TTTTCACCCTCGCTT  60 320
CHC44_RS22925 4509882 .. 4509907 + -11.1  -5.69023   TGGTTGAAATAATAC         AGACCGCCAGC CCGC GCTGGCGGTTA          TTTTTTTGATGTTTT 100 29
CHC44_RS22930 4511276 .. 4511296 + -12.6  -4.00411   GTTTTTGTGATCGCG            GTAGGCCG CACGA CGGCCTAC            TTATTTACAATTTTG 100 40
CHC44_RS22935 4513466 .. 4513489 +  -2.2  -3.86897   GTGTAGGCCGGATAA          GCGCAGCGCC ATCC GGCGTAATGC           TTTATCCGCGATGCA  53 67
CHC44_RS22940 NONE
CHC44_RS22945 NONE
CHC44_RS22950 NONE
        dppF 4517535 .. 4517546 +  -7.2  -3.30124   CGTTTTATGCCGGAT                GGCG GCTG CGCC                 TTATCAAGCCTACAC  63 44
CHC44_RS22975 4519707 .. 4519746 + -18.6  -3.73775   AATGGCAACATGCGC  CCGAACCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG   TTTACTGCGGGTAAG 100 66
CHC44_RS22995 4523624 .. 4523637 +  -2.3  -2.58544   CACATTCATTAAGGA               AGCCA TGAA TGGCG                ATTCTGGGACTGCAG  39 18
CHC44_RS23000 4524362 .. 4524404 +  -5.3  -2.57463   ATGCGGGCGACAAAA CGTCCGCCGGGAGCCTGCG ATGAG CGCCCTTTCCCGGTGGCTG CTTATCCCGCCGGTT  48 3
        bcsA NONE
CHC44_RS23010 NONE
CHC44_RS23015 NONE
CHC44_RS23020 NONE
CHC44_RS23025 NONE
CHC44_RS23030 NONE
CHC44_RS23035 4537592 .. 4537617 + -12.6  -3.37259   ATCTCGCCACTTATG         CCCGTAGTCC CTTCCA GGACTGCGGG          TGTTTGCGCATAATT  90 40
CHC44_RS23040 4539489 .. 4539502 +  -3.1  -4.32857   GAGTCGCCTGCGGCA               GTGGT GTCT ATCAC                TTTCTCTTTCGGCAG  62 230
CHC44_RS23050 4541265 .. 4541310 +  -2.5  -3.30658   TTCTGACCCTGTAAC GCCAGACTGTTCC-CGTAATAC GTG GTATTACGAGGCGCGGTCATCC TCCTTTTTCGTCTGG  46 27
CHC44_RS23055 4543443 .. 4543470 + -11.2  -3.02144   CAGTAACGTGAAACG        TAGCGCCGGATG ATGC CATCCGGCGCCC         TATTACAACGCCTGA  79 35
CHC44_RS23075 4548879 .. 4548893 +  -8.6  -3.51242   GAAAAACTGATGTTT               TCGGTT AGT AACCGA               TCTTCTTATAAATTT  71 525
CHC44_RS23085 4550799 .. 4550823 +  -7.1  -2.79183   ACTGTTTTTAACCAG          TTATGGGCGAT TTC ATCGCCCAGCA          TATCGTCGCCATACA  52 213
CHC44_RS23095 4553352 .. 4553376 + -11.5  -6.02546   GAAGAGCAGGCTGAA          TCGGGATCC AGATCGC GGATCCCGA          TTTTTTTTGCTTTCC 100 59
CHC44_RS23100 NONE
CHC44_RS23105 NONE
CHC44_RS23110 NONE
CHC44_RS23115 4557936 .. 4557956 +  -8.3  -2.62616   CTTTACGTAGTTGAA            TTCCGGTCT TAC AGGTCGGAA            TAGTCTAAGGCATGA  63 106
CHC44_RS23130 4560969 .. 4560997 +  -2.3  -3.81755   TTACCTCTTATCCGT        TACCAGTCAGTGT ATG ACACTGGAGGGAA        TTATGTTTGAAAAAT  51 55
CHC44_RS23135 4562274 .. 4562311 +  -7.8  -2.64925   TAGCTTTTTAGTTGC   TATCCGGCCTACAT AATATAAAGC GCGTAGGCCGGATA    ATTATCGTCCGGTAT  59 64
CHC44_RS23150 4566122 .. 4566153 + -10.3  -3.01712   AACGCGCTGACGTTG      TCA-CCCGGCTTAT AAAAC GTAAGCCGGGATGA      TGTTAAAGGGGCGGC  73 31
CHC44_RS23155 4568336 .. 4568358 +    -2  -3.18264   ATTACGGGATTAAAG           GCTGATTT TACGTGC AAATCTGC           TTAATGGATGAAACG  44 21
CHC44_RS23160 4569156 .. 4569194 +  -6.7  -3.25787   CGATTCTCAATTATT  TGTAG-GCCGGATAAGGC GTAA GCCGTATCCGGCACTGAG   TATTACTGTTCGGTA  59 76
CHC44_RS23175 4572254 .. 4572284 + -11.9   -2.8585   TCGTTTCATCCTGAC      AGGCCGGATTAGCG ACAG CGCTA-TCCGGCCC       ATTTGGCTTAAATAA  80 128
CHC44_RS23185 4575450 .. 4575473 +  -5.8  -2.91395   TCCCGAATGGAAACC          CCCGCTGAGC GCAC GCCCGGCGGA           CTTTGTGACACGCAT  51 260
CHC44_RS23190 NONE
CHC44_RS23195 NONE
CHC44_RS23200 4580529 .. 4580539 +  -8.2  -3.50555   GCCGGGCAAGCGAAG                 CGCC CCC GGCG                 TTAGTCTTCTTTCGG  67 104
CHC44_RS23220 4584522 .. 4584544 +  -8.3   -4.6391   GAGGCCTGGCTTTCT           GCGGCGGCG CTTTC TGCCGACGC           TTTTGTATCGTTGTT  87 486
CHC44_RS23235 4585949 .. 4585985 +  -3.6   -4.2828   CTGATCTTCCAGCGC   CGCCGCTGCTGCT-GCGG ATT CCTCTACCAGC-GAGGCG   TTTTGCTGCGTCACG  64 199
CHC44_RS23255 4591439 .. 4591452 +  -3.7   -4.1196   CCCAGTTCGCCGGAA               CGGGC GGCA GACCG                TTTTCCACCTCGCTT  60 404
CHC44_RS23270 NONE
        ftsE NONE
CHC44_RS23280 4595301 .. 4595317 +    -8  -3.68024   ATGGGCTTCCGTTCG              CAGGGA AAGAG TCCCTG              TTGTCTCTTCCCCGC  69 69
        rpoH 4596379 .. 4596400 + -10.9  -5.49579   CGAATTGCCAATGAA           CCCTCGAAT GTGA ATTCGGGGG            TTTTGTTTTTTGTAG 100 47
CHC44_RS23290 4597945 .. 4597971 +  -8.7  -4.66535   TCTCCCGGCATGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         TTTCTTTTAGCGCTT  89 188
        livk 4599915 .. 4599933 + -13.1  -2.73159   AGATAAGTTATCCCA             CCGCCCG CACGC CGGGCGG             GTTTAAAAAGGTTAC  85 48
CHC44_RS23310 NONE
        livM 4602146 .. 4602159 +  -3.1  -2.78867   GGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTAGCGGTTAA  43 19
        livG NONE
CHC44_RS23325 4603696 .. 4603709 +  -8.1  -5.65177   TAAAATTTTTCAAAA               GAGCC TGAT GGCTC                TTTTTTTGTACATGT 100 90
CHC44_RS23330 NONE
CHC44_RS23335 4604493 .. 4604519 +  -2.4  -5.04175   TCTCTGTCGCCTTAC         TATCTTTTTTTT GTA ATAAAAAAGTTA         TTTTTCTGTCATTCG  71 169
CHC44_RS23340 4605950 .. 4605986 + -17.5  -2.71011   GCCTGATGGCGCTGC    GCTTATCAGGCCTACAG CGT TTGTAGGCCTGATAAGG    TGCTTGCACCGCCAT 100 51
CHC44_RS23345 NONE
CHC44_RS23350 NONE
        ugpC NONE
CHC44_RS23360 4609585 .. 4609611 +  -9.4  -2.82516   GGCTGATAGTTTTCA         GCGGGATGTC AGGCTGC GGCGTCCCGC         TGTCCTGCTGCAACA  69 42
CHC44_RS23370 4611863 .. 4611883 + -16.9  -3.39028   GATTTTTAATTCCAG            GCCCGGTGT CAG ACACCGGGC            TATTTGCAGATTATG 100 39
CHC44_RS23400 NONE
CHC44_RS23405 4619038 .. 4619070 +  -4.8  -4.40993   TGTAACCTTTTGTAG     GCCGGAT-AAGACGC GAAA GCGTTGCCATCCGGC      TTTTCATCGTTTGTC  68 46
CHC44_RS23410 4620268 .. 4620279 +  -3.6  -3.53444   TTTGCAACTTGTAGA                GTGG GGGC CCGC                 TTTGAGCACGACTAA  50 151
CHC44_RS23415 NONE
CHC44_RS23420 4622216 .. 4622241 +  -6.2  -5.80364   TATCGATACCGTAAG        CCGGGTAAGGCG TAAT CGC-T-ACCCGG         TTTTTTTATTGAGGT 100 90
         asd 4623779 .. 4623794 +  -6.1  -5.48825   TTTGTGTTAAACCAG              GGGTG CATCGT CACCC               TTTTTTTGCGTAATA 100 123
CHC44_RS23435 NONE
CHC44_RS23440 NONE
        glgC NONE
CHC44_RS23450 NONE
CHC44_RS23455 4633416 .. 4633433 + -14.1  -5.32882   TTTAATGCTTGAGAA             CGGGGCC AAAC GGCCCCG              TTTTTTATCGTGGTA 100 44
CHC44_RS23460 4634345 .. 4634361 + -10.8  -3.80461   AAATAAAAAGACATA              GCGGGC AAGAA GCCCGC              TTTCGTCATCGCTTA  85 40
        gldA 4639839 .. 4639872 +  -5.9  -2.84103   GCCTGTAAATAAAAA     ACGGCAGCCGGAACT TTCA ACTTCTGTCTGCCGC      TATCGTGAATGTTTT  51 46
CHC44_RS23485 NONE
CHC44_RS23490 4642058 .. 4642068 +  -2.4  -4.63218   AAAAGGGCGGTATAA                 ACCG CCC CGGA                 TTTTATTACGACGCC  64 56
CHC44_RS23500 NONE
CHC44_RS23505 4645018 .. 4645039 +  -5.9  -4.56597   AACGAACGTGAGGCG           TATC-CGGCC TGT GGTCGAGATA           TTTTTCCAGGCCGGG  72 30
CHC44_RS23510 4645908 .. 4645927 +  -7.9  -2.70525   TGCGCGTGATCGTAG            GCCTGAT AAGCTC ATCAGGC             ATTAATTTAAACCCC  60 68
CHC44_RS23520 NONE
CHC44_RS23525 4653719 .. 4653736 + -14.1  -3.99324   AGAAGAAGTAATAAA             GCCGGGG ATTT CCCCGGC              TTTATGATGGTGAGA 100 30
CHC44_RS23545 4657926 .. 4657955 +  -7.1  -2.90075   GGCGGATAAACGTAT       TGAAGCGCGC-GGC GTC GCCAGTGTGCATCA       TGTAATTAAACAAAC  53 300
CHC44_RS23585 4665928 .. 4665975 +  -4.8  -3.18023   CCGGACGGTTCTAAA GCATGAG-GCGAATGCGCTTCTC GCC GCGAAGTTCATTTGCCCGCACGC TGTTGCTCATCGTCA  52 20
CHC44_RS23590 4667283 .. 4667308 + -13.4  -3.28791   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAC CCTCCCTTTC          TTCTCAACGCCGGAT  95 26
CHC44_RS23600 4671083 .. 4671094 +  -5.8  -3.30124   TTTTTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 43
CHC44_RS23625 4676314 .. 4676327 +  -9.5  -5.14563   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC  93 99
CHC44_RS23635 NONE
CHC44_RS23640 4680307 .. 4680320 +  -3.7  -3.53419   TTAACGAGGAGCGCC               GCCCG TGAA CGCGC                TCTTTGATATCTGGT  52 5
CHC44_RS23645 NONE
CHC44_RS23650 NONE
CHC44_RS23655 4682442 .. 4682457 +  -7.6  -2.84878   GCTTTTCGTTGCTTA              CGCATT GATT AATGCG               CTTTGCCTTGCCGAA  59 139
CHC44_RS23660 NONE
CHC44_RS23665 NONE
CHC44_RS23670 4684475 .. 4684499 +  -2.2  -4.28432   CAACAAGAAAGGTCA          GACTGATA TTGCGTAGC TGTCAGTC          TTTTAGCTTCAGGTT  57 41
CHC44_RS23675 4685975 .. 4685996 +  -6.6  -2.97613   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAAGG            TGTAATTAGTTAGTC  56 166
CHC44_RS23680 NONE
CHC44_RS23685 NONE
CHC44_RS23690 NONE
        trpS 4689396 .. 4689409 +  -9.5  -5.76633   AGAACTGTAAAAAAA               CCGGG AAAT CCCGG                TTTTTTTGTATCTGC 100 127
CHC44_RS23735 4703627 .. 4703647 + -11.8  -4.46155   CATAAAACATGCCTG            CGCGGGTG CGAGC CGCCCGCG            TTTTCTCCCTGTCTC 100 36
CHC44_RS23740 NONE
CHC44_RS23745 NONE
CHC44_RS23750 4705106 .. 4705124 +  -3.2  -2.94888   CATTGAGTGATTTTT             TATTCATA TTT TGTGAGTA             TAATTTCACTGAATT  44 52
CHC44_RS23755 4706386 .. 4706422 + -11.5  -3.16437   GTGGTGGCCTGATGG    CGGATTGCCGGATAAGC GTA GCGCATCCGGCAGTCGG    TCTTAACCTTTTGTA  81 29
CHC44_RS23770 4709963 .. 4709988 +  -9.7  -2.72461   GTTTTTATCTCGTAG         GCCCGATAAGCG TAG CGCC-ATCGGGC         ATTTCACCGCGGTTA  69 83
CHC44_RS23790 4712955 .. 4712974 +  -7.9  -3.30741   CCGCCCCGTGCGTTA            GAGCCTA ATGGGA TAGGCTC             TTAGTCGTTCTGCAT  65 267
CHC44_RS23805 NONE
CHC44_RS23810 NONE
CHC44_RS23815 NONE
CHC44_RS23820 NONE
CHC44_RS24290 4718596 .. 4718606 +  -2.4  -4.33417   TTCGTCTCAATAATG                 CGGC GGC GGCG                 TTTCTTCTGCCTGAG  59 28
CHC44_RS23830 4719854 .. 4719875 +   -13  -6.09888   AATAAAAACTGAGAG           CCGCCGCT TGTAAT AGCGGCGG            TTTTTTTTATTCAGG 100 36
CHC44_RS23835 NONE
CHC44_RS23840 4721308 .. 4721338 +  -9.8  -5.24129   GGATGCGCTGCTGGC      GACGTC-AGCGCT AACGGA AGCGCTGGGCGTC       TTTTTTATCAGCGAC 100 105
CHC44_RS23850 4721934 .. 4721956 + -10.6   -4.7268   CGCCCTAAAATTCGG           CGTCCTCATA TTG TGTGAGGGCG           TTTTATTACGTGTTT  95 81
CHC44_RS23855 NONE
CHC44_RS23860 4722970 .. 4722993 +  -8.9  -4.21275   GTCATAGTCACCAGG          CGGGCG-CTT CAGGT AAGTCGCCCG          TTTTGGATAACTTAA  82 51
CHC44_RS23920 4730352 .. 4730362 +  -5.4   -3.4582   GCGCACCTGGTCCCG                 TCGT TCA ACGA                 TCTTTCCTAACATGA  57 148
        rplV 4730972 .. 4730993 +  -5.8  -4.14739   GCGAACACCAAAAAT           TCGCTGAC AACCTG GACAGCGA            TTTTAAAGTACGTCA  65 127
CHC44_RS23945 NONE
CHC44_RS23950 4732478 .. 4732503 + -12.7    -5.252   CGCATTCTCAACGAA         TAAACGGCTCA GCGA TGGGCCGTTTA          TTTTTTCTACCCATA 100 48
CHC44_RS23955 NONE
CHC44_RS23960 NONE
CHC44_RS23965 NONE
CHC44_RS23970 NONE
CHC44_RS23975 4734718 .. 4734729 +  -5.8  -2.62616   CAAAGGTAAAAACGG                CGAG CTGA CTCG                 TACTCTCAACGATGC   0 130
CHC44_RS23885 4726437 .. 4726452 - -11.8  -3.14878   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT  83 72
CHC44_RS23825 4718560 .. 4718574 -  -8.5  -5.24531   ATCGGGCACAAAAAA               GCGGG TTATC CCCGC               TTTTTTTTCGTCTCA  95 38
CHC44_RS23800 NONE
CHC44_RS23795 4712545 .. 4712556 -  -5.8  -4.95896   AGAAAGCGAGAAAAA                CCAG CAAG CTGG                 TGGCATTTACTTGTT  83 184
CHC44_RS23785 NONE
CHC44_RS23780 NONE
CHC44_RS23775 4709731 .. 4709741 -  -2.4  -3.02144   CGAGCGCCGGGAAGA                 CGCG CCG CGCC                 TGTTTACGCACATTA  42 285
CHC44_RS23765 4708528 .. 4708549 -    -8  -5.30616   CGATGCAAACAAAAA           TGGCGCAT GATAAA ACGCGCCA            TTCTGACGGAATTAA  91 37
CHC44_RS23760 4706346 .. 4706356 -  -8.2  -2.61216   CCATGAAGGAATGCA                 GCGC TTT GCGC                 AGGCGGTAGGGAAGG  56 94
CHC44_RS23730 4701550 .. 4701579 - -13.5   -2.8805   AGGAGGGGGGATAGA       GTGCCGGAGGGCG ACGT CGCCATCCGGCAA        GGATTATCAATGCGT  87 32
CHC44_RS23725 NONE
        nirD 4698429 .. 4698449 - -12.5  -5.72118   AAAAAATACAAAAAA            GGGGAGGCG TTG CGCCTCCCA            AAAATAATTAACCGC 100 33
CHC44_RS23715 NONE
        cobA 4695966 .. 4695990 -   -13  -4.12188   CGAGTAGTTGTAAAA          TAAAGCCCTG TTATT CAGGGCTTTA          TTTTAATTAATAATT 100 32
        bigA 4689751 .. 4689772 - -14.5  -4.69664   GATATGATTTAAAAA           GGCCGCTTA ATAA TAAGCGGCC            TGTATTAGTGTTATA 100 54
CHC44_RS23700 4689396 .. 4689409 -  -9.5  -5.48303   AGAACTGTAAAAAAA               CCGGG AAAT CCCGG                TTTTTTTGTATCTGC 100 54
CHC44_RS23630 4676314 .. 4676327 -  -9.5  -5.66338   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC 100 34
        igaA 4673180 .. 4673214 -  -9.2  -3.18274   TCCAGGGTAACGCAA     TTTGCGCGACAGGGTA GCA TACCCTGTCGCACGGC     GGCGCTATCAGATGA  70 33
CHC44_RS23615 NONE
CHC44_RS23610 NONE
CHC44_RS23605 4671092 .. 4671137 - -10.6  -2.91593   GATGGCGGCATAAAT GC-CTTATCCGGCCTACGG AGCGGGATG CTGTAGGCCAGATAAGCGC CGCCATCAGACAATG  75 62
        pckA 4667283 .. 4667308 - -13.4   -3.4799   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAC CCTCCCTTTC          TTCTCAACGCCGGAT 100 74
        greB 4664480 .. 4664494 -  -3.4  -2.60032   TGGCTGGCAAAAATG               CCAGCC ATC AGCGGG               GGCTTAGGATTCTTC  42 46
CHC44_RS23575 4662043 .. 4662076 - -13.1  -4.14739   GGACGTATTGCAAAA     TCGCAGGCCGGATAA GAAG TAACCCGGCCTGCGT      ATTACCCGATTAGCG 100 35
CHC44_RS23570 NONE
        feoA 4661428 .. 4661440 -  -4.1  -3.14602   CTCACTGTATTAACA                GGAAA CCG CTTCC                ACTTCTATTAACGCC  48 7
        feoB NONE
CHC44_RS23555 4658752 .. 4658781 - -15.1  -4.21462   AGGCATGACGCAAAA       TTGCCCGGCA-GCG TGA CGCGTACCGGGCAA       CATAACGCGGGATAA 100 80
CHC44_RS23550 4657521 .. 4657536 -  -4.6  -4.07568   TGGTGCCGCGTAAAA              TCGTGC CTTT GCTCGA               TACGTTATGGCCGCA  62 176
CHC44_RS23540 NONE
CHC44_RS23535 4655481 .. 4655507 - -12.3  -2.68823   GGTGGGGCAGACAAG        GCCCGACAGGCG CAAG CGCC-ATCGGGC         ATGGATGCGGGGAAA  81 44
CHC44_RS23530 4653715 .. 4653740 - -17.7  -3.62255   GCGAAGAAGAAGTAA         TAAAGCCGGGG ATTT CCCCGGCTTTA          TGATGGTGAGAGCAC 100 118
CHC44_RS23515 4645872 .. 4645921 -  -9.5  -2.54325   CTGTGTTAAAGAGAC TG-TCTTATCAGGCCTACACTC TGCGCGT GATCGTAGGCCTGATAAGCTCA TCAGGCATTAATTTA  68 38
CHC44_RS23495 4642047 .. 4642064 - -12.7  -4.08767   GGTATGTGGCGAAAA             GGGCGGT ATAA ACCGCCC              CGGATTTTATTACGA 100 35
CHC44_RS23475 NONE
CHC44_RS23470 4635296 .. 4635317 -  -9.3  -4.11692   TATTGATCCTTAAAA           CAGGCGAGC CGTA GCCCGCCAG            GGATATTATTTAAGC  80 31
CHC44_RS23465 4634339 .. 4634368 -  -8.6  -5.27335   GTGCTGAAATAAAAA       GAC-ATAGCGGGC AAGAA GCCCGCTTTCGTC       ATCGCTTAAAGTCCC  95 31
CHC44_RS23395 4616088 .. 4616099 -  -4.4  -2.84126   TGATAAAGCTTAAAG                TGGT AATA ACCA                 TGAAATTCAGATGGT  48 132
CHC44_RS23390 NONE
CHC44_RS23385 4613922 .. 4613941 - -10.8  -4.41548   TTATATTTTATAAAA            GGAGTAAC TTTC GTTACTCC             ATTGTTTTTTATTTT  90 34
CHC44_RS23380 NONE
CHC44_RS23375 4611687 .. 4611698 -  -7.2  -4.37092   ACTGCGGGTAGAAAA                GGGC TTCA GCCC                 CGATACGCTGAAGTT  77 221
CHC44_RS23365 4609478 .. 4609511 - -14.5  -2.72991   GTATACCGTCAATCA     GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGC     GTGGATTGTATCTGC  83 79
        panM NONE
CHC44_RS23295 4597831 .. 4597862 - -10.8  -3.06796   GGCTACGTTATTCAA      CCCCGGTCACTTAC TTAT GTAAGCTCCCGGGG       ATTTCATAACTTGCC  76 29
        rsmD NONE
CHC44_RS23260 4590779 .. 4590795 -  -6.5  -4.58283   CAACGGCGGGAAAAA              GCCGC TAATGAG GCGGC              GCCGTTACAGCAAAA  78 312
CHC44_RS23250 4589887 .. 4589906 - -12.2  -2.95223   TAACCGGAGGATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGCGCTATTATT  80 40
        zntA 4587609 .. 4587631 - -14.8  -3.30007   AATACCGCGGGATAA           CCCGGCGACA CGA CGCCGCCGGG           TGGGAGAAGATTAGT 100 36
CHC44_RS23240 4585603 .. 4585626 -  -6.7  -2.73542   CTGAACCGGTAATGA          TGGTGCGCA AAACGG TGCGCAACA           TGCAAACTGGCGAAA  52 198
CHC44_RS23230 NONE
CHC44_RS23225 4584020 .. 4584047 - -14.1  -5.40072   TGGCGCTTAAAAAAA        CGGCCTCCGTC TGCACT GCCGGAGGCCG         CATCATCGTCGTAAA 100 43
CHC44_RS23215 4581602 .. 4581617 -  -3.2  -2.82623   CTTTTCCCAGAACGA              CCTGGT ACAT ATCAGG               ACCAACGTTGCCTAT  43 71
CHC44_RS23210 NONE
CHC44_RS23205 4580431 .. 4580445 -  -2.8  -4.83615   TACGCTTCAGAAAAA               CGATTG GCA CAATGG               CGTAAACATTATTGC  68 120
CHC44_RS23180 4572161 .. 4572182 - -13.7   -5.8187   CACTGAATAAAAAAA           GCGGGCCAG TTTC CTGACCCGC            TCGTGTTAGATAAGC 100 135
CHC44_RS23170 4570881 .. 4570898 - -10.5  -4.99043   GGGGGATAAACAAAA             CGCCCAC ATAA GCGGGCG              TTGTTGTTGATAGCC  93 121
CHC44_RS23165 4569001 .. 4569039 -  -3.8  -3.53012   CGCGTGGTGGTTAAA  CGTCCCGATTATGCGCC GCCGCT GGCGGATG-TCGCGACG   CCCAACGCCATCGTC  51 183
CHC44_RS23145 NONE
CHC44_RS23140 4561831 .. 4561843 -  -3.4  -3.85698   TTTTTTGGTGATAAA                TTCG GCTGG CGAA                AAACAATCATGTGGG  54 517
CHC44_RS23125 NONE
CHC44_RS23120 4557857 .. 4557908 - -10.3  -2.51464   TCAGTACGTATTAAT CATGCA-GGCT-TGTGCGCCCACCC TCGA AGATGGGCGCACAGAGCGATGAATG CAGGTCGGTGGCCTT  70 61
        treF 4550570 .. 4550591 -  -5.9  -5.60689   GCAGACAATAAAAAA           TGGCTGA AAATTCAG TCAGCCA            TTTATGATGCGATTC  93 58
CHC44_RS23080 4547907 .. 4547921 -  -4.2  -4.64992   GGCAAAAAATAGAAA               GCGC GCCGGAT GCGC               TGGTCATGCTTGATA  71 489
CHC44_RS23070 4546243 .. 4546261 -  -2.2  -3.06515   GTGGATGCTGAAAAT             GCGGCTAC TCT GCGGCCTC             TTTAATGGTTTCAGT  42 11
        yhjD 4545097 .. 4545135 -  -5.3  -2.69151   TGGGTCCACACAGCA  GTAGGCCGAATGACGACGC CGT GCGT-GCCATTCGG-CAGC  AAGCCGCAGACTAGC  48 36
CHC44_RS23060 4543445 .. 4543468 - -18.2  -2.66326   GTAACGTGAAACGTA          GCGCCGGATG ATGC CATCCGGCGC           CCTATTACAACGCCT 100 30
CHC44_RS23045 4539285 .. 4539314 - -10.7  -3.25823   CCGGCGGCACAGTAA       GCTGCCGCCTGCCG GCC CGGTAAGCG-CAGC       GCCACCGGGCAAGAG  78 49
CHC44_RS22990 NONE
        bcsF NONE
        bcsG 4519451 .. 4519493 - -11.3  -4.78848   GCTGGAAAGAGAAAA CCTCCG-CACGTTGACTGGT ATAA ACCTGGCAACCTGACGGAGG CTAAACTTGATCCTC 100 280
CHC44_RS22960 4517554 .. 4517574 -  -6.9  -3.14132   GCTGCGCCTTATCAA            GCCTACA CCTTACC TGTAGGC            CTGGTAAGCGTAGCG  59 68
CHC44_RS22920 4507448 .. 4507466 - -14.6  -4.03204   GACCAAATTCAGAAA             CCCTGCTC AAT GAGCAGGG             TTTTTTTGTATCTGA 100 156
CHC44_RS22870 NONE
CHC44_RS22865 4496977 .. 4497016 -  -2.9  -3.34716   CCATCCGCTAAAAAC GGCCA-GCG-GCAAAATCG AAAT CTATTCTGCGCGCATTGCC  AGCTATGGTTATGCG  47 504
CHC44_RS22855 4494181 .. 4494203 -  -6.9  -4.54727   CTCCGTAAATCAAAA           GGTAAGCGC GGCAT GCGCCAACC           GGAACAGGCTTATTA  77 200
CHC44_RS22850 4493139 .. 4493179 -  -7.8  -2.79098   GCGACCCAGTAATGA CAGTCTGCCCGATAAGCGC AAGCCA GCGCTTATCGGGC---CTG TAGCGTTATCCCGCC  60 31
CHC44_RS22840 4491655 .. 4491673 - -10.3  -4.07687   ATCGGGCGGGGAAAA             CGGTCCT TGCGC AGGACCG             TTAAAACAGAAAGGG  82 48
CHC44_RS22835 4491152 .. 4491171 - -11.4  -6.09888   TTGGAATAAAAAAAA            TCCCCGCC ACCA GGCAGGGA             TTCAAAATTCTGAGC 100 50
CHC44_RS22830 4490298 .. 4490320 -    -7  -5.72622   GCCAGAAACAAAAAA           GAGCCCATGT ATT AAATGGACTC           TTTCGCTGATGCCTC 100 188
CHC44_RS22785 4483130 .. 4483147 -  -9.9  -3.22774   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTGTCGTTTAGCTAA  72 33
CHC44_RS22760 4477826 .. 4477852 -  -2.4  -3.99374   GCGTAGCAACAATAA        CCTGTTCG-GCA TGAAG TGCACGAA-AGG        GCGTTGTACCAATAC  54 360
CHC44_RS22750 4474839 .. 4474851 -  -3.3   -3.9398   CCATAACGCTACAAA                TGGCG GGG CGCAA                ATGGGGGTCAGGCGG  55 133
CHC44_RS22745 4473136 .. 4473151 -  -5.4  -2.78384   GCGGCGGTGACGACA              GCGG-AC TTT GTGCCGC              GTATCCGGGTGATAA  47 409
CHC44_RS22730 NONE
CHC44_RS22725 4470412 .. 4470422 -  -2.4   -4.4009   CTCTATTTTATAAAA                 CGTC TAT GGCG                 ACTTTTACGACTATT  59 7
CHC44_RS22720 NONE
CHC44_RS22715 4468824 .. 4468853 -    -2  -2.92896   AGCAGAGAAATATCA       CCACGGCCATGA TTAGGC TCCTTGCTGTGG        TTGTTGAAAGGAATC  41 8
CHC44_RS22710 NONE
CHC44_RS22705 NONE
CHC44_RS22700 NONE
        sgbH NONE
CHC44_RS22690 NONE
        araD 4462345 .. 4462361 -  -4.4  -4.48987   CCGGCAGAATGAAAA             CGCCGAG GCCG CT-GGCG              TGTCGCTGGCCTGGA  68 521
CHC44_RS22675 4459637 .. 4459648 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG CAGC CGCC                 ATCCGGCACAGTGTT  63 39
CHC44_RS22665 4456428 .. 4456449 -  -7.3  -4.13945   ACCGCGATCGTAAAA           GATCGGTAC TATC GTAACGATC            GGATTGTCGCTTTCG  74 476
CHC44_RS22645 4450159 .. 4450179 -    -9  -3.17075   TTTCCCTCAACCTAA            CCCTCTCC ACAAG GGAGAGGA            TATCGCCTTCATATT  70 161
CHC44_RS22640 NONE
CHC44_RS22635 4447974 .. 4447984 -  -5.4  -2.76263   CTCATTATTTAATTA                 TCTC GTT GAGA                 ATAAAATCCTTTTTG  50 400
CHC44_RS22625 4447424 .. 4447476 -  -4.9  -3.09983   AAAATTCGGAATATA GCCCGATGCTCTCAAGACATCC TCCGTACAAC GGGTGTCCTGAGAGCCT-GGGA TGCGGAAGGTTTAGA  51 36
CHC44_RS22620 4447120 .. 4447144 -    -5  -3.85296   GTTAGAATGAAAACA         TTCGTCGCTTC TATA GAAGCG-CGCA          AAAACCCGACGTTAT  59 126
CHC44_RS22615 NONE
        sadA 4441840 .. 4441862 - -16.4  -4.30448   AAAGGGAAGTGAAAA           GGCAATGGCA TTA TGCCATTGCC           TTTGATGTCGGGAGT 100 53
CHC44_RS22605 4439939 .. 4439950 -  -2.2  -2.86271   TTGGTATCACAATCA                CGGA ATCA TCCA                 GGTTAAAACATAGGC  41 11
CHC44_RS22600 NONE
        lldD 4437953 .. 4437972 -  -4.8  -2.73268   AATAGCAGAAATTTA            CCGGGCTC TCAC GCGCCAGG             CGTTCAGGCGGCATC  49 29
CHC44_RS22590 4437257 .. 4437275 -  -5.9  -2.88579   GTAAGCGTTGACAGA             CGCGCCA TTGGC CAGCGCG             CCGCTACGCTGTTGG  51 188
CHC44_RS22580 4436066 .. 4436080 -  -2.1  -2.57132   TTTTCTCCTGATAAT               CACAA AATGA TTGCG               CTAACATTTTTATTA  39 10
CHC44_RS22575 4434825 .. 4434843 - -11.7   -3.1352   CTGTAAGGTAAGAGA             GGCGGGA CGGAT TCCCGCC             AGTCGGGTTAAGGGC  83 33
CHC44_RS22570 4433407 .. 4433440 -  -8.3  -5.32944   GGTACAACTAAAAAA    CGCTGTTCCGATGGA GTGCAA TCC--CGGAACAGCG     GAGCGAAGAATTCGC 100 52
CHC44_RS22540 NONE
CHC44_RS22535 NONE
CHC44_RS22530 4426047 .. 4426062 -  -4.6  -3.57144   GTCCGCAGCGCGAAA              GCGGCT TATC AGACGC               TGCTCTGGTCTTTCC  52 98
CHC44_RS22505 NONE
CHC44_RS22500 NONE
CHC44_RS22495 NONE
CHC44_RS22490 4417962 .. 4417991 - -14.4  -4.21194   CCTGATGATGGAAAA       CGCGCTGATACC GTAATA AGTATCAGCGCG        TTTTTTTATCTATTT 100 31
CHC44_RS22435 NONE
CHC44_RS22430 4406324 .. 4406336 -  -9.1  -3.91352   ATAGTCGCAACGAAA                CACGC ACA GCGTG                CGACGTTCTATTGCC  73 85
       coaBC NONE
CHC44_RS22400 4402269 .. 4402289 -    -9  -3.33492   GCACCCACGCTATAA            CCGCAAAC TCAGC GCTTGCGG            CAGTATTATGACGTT  71 58
CHC44_RS22395 4401456 .. 4401472 -  -2.2  -3.36991   CATTACGCTGAAAGA              CCTGAT TGCCT ATCTGG              AAGAAAAACCTGATA  45 171
CHC44_RS22380 NONE
CHC44_RS22375 4399067 .. 4399096 -   -10  -3.93695   CGTACTACCGATAAA       CGCGAGAGCCCGC ATAAG GCGGGCTCT-GTG       ACATATTGAGCGCCA  82 44
CHC44_RS22365 4396945 .. 4396958 -  -2.3  -4.38369   CAATTAAATAAAGAA               CGTGC AACA GCATG                ATTTCCCCCTAATTT  59 275
CHC44_RS22360 4396294 .. 4396321 -  -9.2   -4.3467   ATCCGCAGATCAAAA        CGCTGAGCAG ATGGCTGG CTGCTCAGCA         TATTCCCGGATTTGG  85 44
CHC44_RS22350 4393766 .. 4393781 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA AGTGGG TTCAG               TCTGCCAACAATTTG  43 22
CHC44_RS22345 4393431 .. 4393441 -  -2.4  -2.83082   TCAAACAGATACAAG                 GGCG ACC CGCT                 TTGTGATTAACGACG  40 32
CHC44_RS22340 NONE
CHC44_RS22335 NONE
CHC44_RS22330 4388503 .. 4388538 -  -4.5  -2.76696   TTTTCGCGCAATAAG    GGTTTGTACGGCGGC ATTAAA GCCGCCGTGCTCACT     AGGCGTTGGAATAAC  47 24
CHC44_RS22320 4385647 .. 4385666 - -10.7  -2.63479   AAGAGCGTTACAGCA            GCGGCGA ATCGTG TCGCCGC             CGCAGGGTTTTTACG  74 36
CHC44_RS22315 4383427 .. 4383449 -  -4.8  -3.17146   GTGCGTGACAATACA           CTACTGGCGC TGG GCAACAATAG           CCAGAAGCCCGATTA  49 423
CHC44_RS22300 4379504 .. 4379526 -  -6.4  -4.78149   TGTATAAGCCAAAAA           CGTGTATAAA AAA TCTATACACA           TCACTATACATATTT  80 149
CHC44_RS22295 NONE
CHC44_RS22290 4376762 .. 4376776 -  -2.2  -2.72344   TCGTATTCTGAAGTA               TTTATC CAT AATAAA               ATCCTACTGTCTATA  40 74
CHC44_RS22285 4375647 .. 4375657 -  -4.6  -3.53012   GGCGTGGCGGGGAAA                 GCAC TGC GCGC                 TGTCTTCTGAAATAG  54 41
CHC44_RS22280 4374913 .. 4374929 - -10.9   -3.4678   ACCCTGACATTACAA              CAGGCTT TTG AAGCCTG              CCAGACGAACAAAAC  74 518
CHC44_RS22255 NONE
CHC44_RS22250 NONE
CHC44_RS22245 NONE
CHC44_RS22240 4369630 .. 4369647 -  -8.4  -5.47218   TTGCAGGTAAAAAAA             GACCGG TGATTG CCGGTC              AGGTCAGGTTATTTC 100 34
CHC44_RS22230 NONE
CHC44_RS22225 4364123 .. 4364141 - -14.6  -4.07568   CGCTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGT 100 42
CHC44_RS22205 4361224 .. 4361244 - -14.1  -4.43911   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGCCTCTTCAGG 100 48
CHC44_RS22185 4354710 .. 4354737 -  -9.2  -2.71763   CGGATAACGAGATTA        TGCAGCATCGACG TAT CG-CGATGCTGGA        GCTGGTACAAAAGCA  60 480
CHC44_RS22140 NONE
CHC44_RS22135 4344051 .. 4344064 -  -3.7   -4.0896   AAACGTTCGGTAAAA               CTGGC GCTG GCCGG                TGCGCCGCTGCTACT  60 422
CHC44_RS22125 NONE
CHC44_RS22120 4342090 .. 4342104 -  -2.1  -4.63526   ATAATGACAAAGAAA               TTCCC ATTAA AGGAA               TGATGAGTATTTTGG  65 247
CHC44_RS22040 4325732 .. 4325748 -  -2.2  -3.54158   GATTTGAATAACGAA              GCCG ATCCGCAGG CGGC              GTTGCAGGCTATCAT  47 442
CHC44_RS22020 4323747 .. 4323762 - -10.4  -3.62775   ATTACGCTGTAAGAA              CCTCGC TTCG GCGAGG               TTTTTTGTTTTCCGG  78 61
CHC44_RS22015 4323209 .. 4323230 - -17.3  -3.69354   GCGGATAAGGTGAAA           GGGGAGCGG TTGC CCGCTCCCC            TTCGGTGCGGCTTGA 100 48
CHC44_RS22010 4322247 .. 4322266 -  -7.8  -4.92385   GATATGTAAACAAAA            GCGGCAAC AAAT GTTGCCGA             GAATGTGTTACGTCT  87 59
CHC44_RS22005 4320883 .. 4320903 - -15.4  -3.57144   CGCCGGAGTGTGAAA            CGCCCGGC AAAAA GCCGGGCG            AGGGGAACGTTAAAC 100 35
CHC44_RS21990 NONE
        dsdA 4315947 .. 4315987 -    -9  -3.30771   TCACAGGCCTGATAA GCGTAGCGCCATCAGGC GATGGCGT GCCGGATGGCGCTGC-C  GTCTTTCCGGCACTG  71 49
CHC44_RS21950 4310776 .. 4310805 - -10.7   -3.6707   ATGGAAGAGGTGAAA       GGGTTCCGTCAGC TATG GGTGACGGAAACC        GGGCGATAAATCAGG  83 36
CHC44_RS21880 4296026 .. 4296060 -   -10  -3.15663   AGGCAGCGCCATCAA     CATTGTGGATATCGCC TGG GGCGATAACGACATTG     AAGTGCAGCGAAACT  67 399
CHC44_RS21870 4292206 .. 4292237 -  -3.6  -5.03747   AAACTGGTGAAAAAA      GGCTTCTCGCTGGGC GTG GCGC-GCAAAACGCC      GATTATTTGCGGTTT  77 394
CHC44_RS21835 NONE
CHC44_RS21830 4283935 .. 4283963 -  -7.3  -2.54801   GACTCGCAAATACAG        GGTGTCTGCCTGC GGC GCAGGCAGACTGT        TGGCTTATTTTACGG  57 30
CHC44_RS21825 4282635 .. 4282651 - -12.3  -2.75992   TCTGATTGAAGAGGA              CGCGTTC ATC GAACGCG              GCGAGCGTCGCCAGC  72 331
        rpmH 4275979 .. 4275992 -  -2.3  -3.58343   TTTATTACTTGGAAA               CGGTC AGAC GAGCG                CGGCCTTTAGCACGA  49 1
CHC44_RS21795 NONE
CHC44_RS21790 NONE
CHC44_RS21785 4273612 .. 4273629 - -12.7   -5.4505   TGTTGCAATAAAAAA             GGCGGTC ATAT GACCGCC              TTTTGATTGTAGGCC 100 118
CHC44_RS21780 4272027 .. 4272069 -  -6.4  -4.53163   CTACACAGTAGAAAA CGT-TTCATAGCGGCCTCAC GAAAA GTGTGGC-GCTAAGAATACG GGGCGACGTTGCGCG  76 173
CHC44_RS21775 NONE
CHC44_RS21770 NONE
CHC44_RS21765 NONE
CHC44_RS21760 4268387 .. 4268409 - -14.8  -3.57418   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGTGAGGG           TTTTTAACGAACTTA 100 38
CHC44_RS21750 4265734 .. 4265774 -  -2.4  -3.85817   ACCGCGCTGGAGAAA TTCTCCCAGCAGCACCAGC CGCT GCTGGT-CAGCCTGGAGTC  ACTGGGCCGCCACAC  52 457
CHC44_RS21710 4257102 .. 4257119 - -12.7  -3.38272   TAGTACCAGGCAGAA             GGCCGTC GATA GACGGCC              TTTTTTTGTGCGCCG  90 134
CHC44_RS21620 4239366 .. 4239387 -  -5.7  -2.76263   GGGAGGATTTAACGA           GCAGTGCGC AAAA GCGTTCTGC            CTGGCGTTGATGCGC  50 450
        trkD 4234562 .. 4234581 - -10.8   -3.0873   GAAATCAGGTGAAGA            TAATCGCC ATCA GGCGATTA             TCTTGTGGGAATCTA  76 94
CHC44_RS21600 NONE
CHC44_RS21595 NONE
CHC44_RS21590 NONE
CHC44_RS21585 4230503 .. 4230526 -  -9.5  -2.75844   GGTTCCACGTCAAAG          TGCGCCACC GGTTAG GGTGGCGCG           TGCCCTGCTTTTCTT  69 113
CHC44_RS21580 NONE
CHC44_RS21575 4228317 .. 4228344 -  -6.2  -3.49777   TCTGACAGACGATAA        CGCCAGCA-GCGG CAA CAGCGTTCTGGCG        GTTACGCAGCAATTG  57 231
CHC44_RS21560 4224385 .. 4224398 -  -2.3  -2.72471   TTTCTATCAGACAAT               CTGTG TGAG CACTG                CAAAGACCGTTTCTT  40 36
CHC44_RS21555 4224187 .. 4224222 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAAGGCAGGTGACT  79 61
CHC44_RS21550 4221071 .. 4221082 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf 4220916 .. 4220931 -  -3.3  -2.82742   ATTCTTTTACAACCA              CTGAT TTTTAC ATCAG               TTTACTGCTTAATTT  43 44
CHC44_RS21540 4220804 .. 4220823 -  -2.8  -2.79684   CTACCAATTGAACTA            CGCC-CC TAATTAG GGTGGCG            GAACGGACGGGACTC  41 21
CHC44_RS21535 4220708 .. 4220727 - -10.8  -6.11644   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG 100 33
CHC44_RS21525 4219321 .. 4219333 -  -6.9  -5.40072   GCTGGCGTAAAAAAA                GGGCA TTA CGCCC                TTTTTATTAATCATC  91 32
CHC44_RS21515 4217297 .. 4217320 - -13.8  -5.78622   TCAGGCCAAAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TCTTAGTTCGTTAAG 100 50
CHC44_RS21510 NONE
CHC44_RS21505 NONE
CHC44_RS21500 4214324 .. 4214338 -  -4.4  -2.78679   TCCTGTGACGCAAAT               TATTTT GGG AAAATA               TTAATTTTATTTATT  47 39
CHC44_RS21495 NONE
        ilvA 4210753 .. 4210774 -  -8.7  -2.63301   CATATCTGGATATCA           GGCCCAC TTTACTTT GTGGGCC            TGAAAAACTAGACGC  63 45
CHC44_RS21485 NONE
CHC44_RS21480 4209802 .. 4209818 -  -9.4  -5.40072   CTGCGCGCAAAAAAA              GCGGCT GCATG AGCCGC              TAATTGATGCGTTCT 100 63
CHC44_RS21470 4207238 .. 4207265 -  -9.9  -5.28942   TATCGCAAATAAAAA       GCCGGGT--GGCG GCTA CGCCTTACCCGGC        CTACATCGTCTGCTT 100 86
CHC44_RS21460 NONE
CHC44_RS21455 4206479 .. 4206504 - -13.3  -3.32202   GAGGCCCAGAGAAGA         CCAGGCTGCTT TTTC AGGCAGCCTGG          AAAAGGTCAATCAGC  95 36
CHC44_RS21450 4204117 .. 4204131 -  -2.7  -4.30576   GCTTCATCAGCAAAA               CGCGG TACCG CCCCG               TGTTGCGGAACAGCT  62 285
        trxA 4200935 .. 4200985 - -10.6  -2.74563   CTGATACCTTAATCA TTCGTCGAATGACAGACGC-CTG ACTATA CAGCGCCTTTGTCATTCGACGTA TAAAAGGTATTACGC  74 35
CHC44_RS24255 NONE
         rho 4199272 .. 4199303 - -14.6  -4.65446   ATTACAGATATAAAA      CAAAAACGCCACGT AAAA ACGTGGCGTTTTCA       GGTAAAGACCAGGTT 100 39
CHC44_RS21415 NONE
CHC44_RS21410 4196881 .. 4196904 - -12.5  -3.06696   TTCTCTTCGAATAGA          CAGTAGGGG CCCAGC CCCCTACTG           CAGAGGTGTTGCTAA  83 37
CHC44_RS21405 NONE
CHC44_RS21400 NONE
CHC44_RS21395 NONE
        rfbA NONE
CHC44_RS21385 NONE
CHC44_RS21380 NONE
CHC44_RS21375 NONE
CHC44_RS21370 NONE
CHC44_RS21365 NONE
CHC44_RS21360 4186179 .. 4186193 -  -4.3   -2.6704   CAAATGGCAAATGGA               GCATT AAAAA AATGC               ACTTATTGTGTAAGA  46 112
CHC44_RS21355 NONE
CHC44_RS21350 NONE
CHC44_RS21345 NONE
CHC44_RS21340 NONE
CHC44_RS21335 4184129 .. 4184144 - -11.8   -5.8901   ACAGAAAACAAAAAA              CCCCGC CGAA GCGGGG               TTCAAAATTGGTCGG 100 34
CHC44_RS21310 4176590 .. 4176602 -  -2.7  -3.96892   AATCCTCAGGAGAAA                TACTG CTG CAATA                GCGGCGCGTCATGAT  54 3
CHC44_RS21290 4174837 .. 4174847 -  -2.4  -2.56715   ATCCTCAGTAATTGA                 CCTG GGA CGGG                 CCATCTCCCGTTGCG  39 4
CHC44_RS21285 NONE
CHC44_RS21280 NONE
        xerC NONE
CHC44_RS21270 4171545 .. 4171556 -  -7.2   -5.1166   CATGAAAACTAAAAA                CGCC CGGT GGCG                 CTTCGCTTACCGGGG  86 115
CHC44_RS21265 4168989 .. 4169002 -  -4.5  -4.42765   CGGGAAAAAATGAAA               GGTCG CTGA CAACC                GCTAAGGCCATCAGC  66 371
CHC44_RS21255 4167897 .. 4167915 -  -8.8   -2.5409   AGAACTTCCAACGGA             CTGGCGGT TAA ATCGCCAG             TCCGTATATTTTACA  63 36
CHC44_RS21245 4166992 .. 4167024 - -12.2  -4.04927   GTAAGCATTAAATAA      TAAAATGGCAGCTA TTATC TGGCTGCCATTTTA      TGTTATTTCTTCTTA  93 28
CHC44_RS21230 4164499 .. 4164520 - -12.3  -4.63479   CACCATAAATCAAAA           CAGGCGCTA TTTT CAGCGCCTG            CGAGAGAAACTGCAA 100 60
CHC44_RS21225 NONE
CHC44_RS21220 4161569 .. 4161579 -  -2.4  -2.50816   TGGGTATCCAGCAAT                 GGCG CGC CGCA                 GGCGCTATCGATCTG  38 404
CHC44_RS21210 4160180 .. 4160190 -  -4.6  -3.91798   TAACCTCTAAGCAAA                 GCGA TTT CCGC                 TGGATAAATTAGGCT  59 6
CHC44_RS21205 4159323 .. 4159339 -  -6.6  -3.12999   GTAGCGGAGAGTGAA              GTTGAC AACTG GTCAAC              TAACAAACAATCACA  58 41
CHC44_RS21200 4158063 .. 4158073 -  -3.2  -4.25104   CGCTGGCCAGCAAAA                 CGCA GAT TACG                 CCGGAAGATTTAGCC  62 327
CHC44_RS21190 4154679 .. 4154695 -  -9.4  -2.72471   GCGCCATGAGACAAT              GCGACG TTTAT CGTCGC              CAGGGAACATAACAG  69 351
CHC44_RS21185 4153250 .. 4153261 -  -2.2  -3.60316   ACGGCGGGAAAAAAG                GCTA ACCA CAGC                 GCATTACGATGTTTG  49 98
CHC44_RS21175 4151386 .. 4151402 -  -9.4   -5.2853   CACGCAAAAAGAAAA              GGCCGA ACGCG TCGGCC              TTTGCAAAAGAGAGG 100 45
CHC44_RS21170 4149802 .. 4149819 -  -2.6  -3.11727   AAGAAGTGTAACAGA             TTGGGC CAATTT GCCCTA              CTCTGCGCCAGGACT  43 58
CHC44_RS21165 NONE
        ubiJ NONE
        ubiB 4146657 .. 4146667 -  -2.4   -2.8937   ACATACTTTTACATA                 CGAC CGG GACG                 ACATTGACTTGCGGC  41 107
CHC44_RS21150 NONE
CHC44_RS21145 NONE
        tatC 4144930 .. 4144951 - -15.9  -2.62184   CTTGCCCCCATATGA           CAACCGCCC TGGC GGGCGGTTG            TGTTTAGTCTTCAGT 100 29
CHC44_RS21135 4143747 .. 4143767 -  -3.2  -5.02074   TCACCCTGGAAAAAA            TGGTACGC GGAAA ACGTACCT            CCGTCAGCGAACCGC  76 389
CHC44_RS21125 4141916 .. 4141957 -  -2.4  -3.01712   GGTGTCGGGTCAATA CCGACATTTTTCAAGCCGAG TCGC CGCAGCCTGAAA--TGTCGA TGTCCGCTTTCAGTT  42 39
CHC44_RS21120 4141157 .. 4141174 - -12.7  -4.74504   AGGCTAACGTAAAAA             GGGACGC TACT GCGTCCC              ATAAAATAGTTAAAT 100 35
CHC44_RS21115 4138967 .. 4139000 - -17.5  -3.09933   CGGCAACTGAGCGAA     TCCCCGGGCACATAG ATAA CTATGTGCCCGGGAT      GAGCAAAGGCAGCCA 100 132
CHC44_RS21100 NONE
CHC44_RS21095 NONE
CHC44_RS21090 NONE
CHC44_RS21085 4131198 .. 4131211 -  -3.8  -3.12351   CCGCTTCAGAGTCAA               GCGA TTATTT TCGC                TTTTCTCCGTGAGGT  47 180
CHC44_RS21075 4129413 .. 4129426 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGTTTCTT  40 36
CHC44_RS21070 4129252 .. 4129267 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
CHC44_RS21065 4129057 .. 4129090 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATCTTTTCGTAAAC  69 51
CHC44_RS21060 NONE
         rrf 4125581 .. 4125630 - -22.5   -2.7035   CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
CHC44_RS21040 4123908 .. 4123918 -  -8.2  -3.62597   TTTACTCTTTAATAA                 CGCC GCG GGCG                 CGTAAAAGCGCCGTT  69 1
CHC44_RS21035 NONE
CHC44_RS21030 4122166 .. 4122184 -   -16  -4.87273   AACATCTTATAAAAA             CGCCGGTC AGT GACCGGCG             TTCTTTTTATTTTTT 100 32
CHC44_RS21015 4117845 .. 4117871 - -18.1  -5.45652   ACGCCCAATAAAAAA         CGCCCCAGTCA TAAAC TGACTGGGGCG         GCTAAAATATTCAGC 100 250
CHC44_RS21005 4116605 .. 4116659 - -13.9  -3.99405   GGAATCTAGCAGAAA GCAAG-CAAAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTTCTTGACTCAC GACCCTTAACGGGTT 100 31
CHC44_RS21000 4115979 .. 4115997 -  -6.1   -3.3636   CCACACCAGATAACA             TATAACC GGAAG GGTTATA             AGCAGGACGGGCAAG  59 58
        hemN 4114189 .. 4114212 -  -7.5  -2.68544   AAGATTAATAATTGA          GCGCAAAAC GCTGCT ATTTTGCGC           TTTACTGTTCCGATG  57 281
CHC44_RS20955 4107756 .. 4107782 -  -8.7  -5.80364   ACGTGAATAAAAAAA         CCCCGCCGA GCTTTCATT TCGGCAGGG         TTTTTATCCGTAAGA 100 48
CHC44_RS20880 NONE
CHC44_RS20875 4090364 .. 4090390 -  -6.6   -4.3821   AAAAGACAATAGAAA         CGCAGACGAT GCCCAAT ATCGCCTGCA         TCACAGCGCCGTTTT  74 89
CHC44_RS20870 NONE
CHC44_RS20865 NONE
         dtd NONE
CHC44_RS20855 4087173 .. 4087184 -  -7.2  -4.39828   AACACCTGGAGAAAA                CGCC CCCT GGCG                 TTTCAGTATTGCGAA  79 219
CHC44_RS20835 NONE
CHC44_RS20830 4084266 .. 4084282 -    -5  -3.93695   GTCAGCAGCGATAAA              GCCCCG TTTAT CTGGGC              CGCGCTCTCCCTTTA  63 517
CHC44_RS20800 4077980 .. 4077994 - -12.8  -4.58395   GCGACTGCCGAAAAA               GCGCCC CAG GGGCGC               TTTTTCGCTCGAAGT 100 204
CHC44_RS20790 4075507 .. 4075521 -  -8.5   -5.4387   ACATAAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA 100 96
CHC44_RS20775 4073579 .. 4073593 -  -8.5  -3.28712   TTGTCGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAATTTCAA  69 37
CHC44_RS20745 4067037 .. 4067048 -  -7.2  -3.06796   CCGTAGGCCAGGTAA                GGCG CAGC CGCC                 ATCCGGTATTAAAGG  60 88
CHC44_RS20740 4065679 .. 4065689 -  -2.4  -3.19656   AAACCGATGCATGAA                 GCTG CTG CCGC                 GCTTGGCGTTGACCC  43 446
CHC44_RS20730 4063722 .. 4063744 - -14.2  -5.82316   ACCAGGTAAAAAAAA           CCGGCTACCT ATA AAGTAGCCGG           AAAAGGGAATAAATA 100 58
CHC44_RS20710 NONE
CHC44_RS20705 NONE
CHC44_RS20700 4058641 .. 4058666 - -13.3  -3.44381   AGCGAACCTAAAAAC         CATCGGCCTGC GAAT GCAGGCCGATT          TTTTATCTCGCCGTC 100 46
        cpxP 4055859 .. 4055877 - -14.6  -5.97575   AATTGATAAAAAAAA             CCCCCACA TCA TGTGGGGG             AAGACAGGGATGGTG 100 65
CHC44_RS20670 NONE
CHC44_RS20665 NONE
CHC44_RS20660 NONE
CHC44_RS20655 NONE
CHC44_RS20650 NONE
CHC44_RS20645 NONE
CHC44_RS20640 4049827 .. 4049849 -  -4.8  -5.10461   TTGATGTAATAAAAA           CGGCCTCATT AAA AATGAGGCTT           ATCGTTTTATTATTG  79 130
CHC44_RS20610 NONE
CHC44_RS20605 NONE
CHC44_RS20600 4040768 .. 4040787 -  -3.4  -3.05816   GGAGCGTTCAGTTAA            CCGGCGGT TTTT ACCGCCTT             TGGTGGACGTCCGCG  45 2
CHC44_RS20595 NONE
CHC44_RS20590 NONE
CHC44_RS20585 NONE
CHC44_RS20580 NONE
CHC44_RS20575 NONE
CHC44_RS20570 NONE
CHC44_RS20565 NONE
CHC44_RS20560 NONE
CHC44_RS20555 NONE
CHC44_RS20550 NONE
CHC44_RS20545 NONE
CHC44_RS20540 NONE
CHC44_RS20535 NONE
CHC44_RS20530 4032684 .. 4032702 -  -8.1  -5.32396   ACAGGAAAAAGAAAA             GGCGGGT AATAA ACCCACC             TGAATATTTAGCGTG  95 33
CHC44_RS20525 NONE
CHC44_RS20520 4030831 .. 4030857 - -15.2  -3.27923   TCTGAATAGGATTAA         TAACCGGCCAGC AGT GCTGACCGGTCA         GGGAATTACAGCCCG 100 31
CHC44_RS20515 NONE
CHC44_RS20510 NONE
CHC44_RS20505 NONE
CHC44_RS20500 NONE
CHC44_RS20495 4026139 .. 4026151 -  -2.7  -3.34468   GGGCAATGAAACATA                TTAAG CAC CTCAA                CGGTTTGGCTGATGT  46 83
CHC44_RS20490 4025889 .. 4025904 - -11.8  -4.35524   CCTTTAAAGCGAAAA              CCCCGC AATC GCGGGG               CTTTTTGTTGGTGGT  95 40
CHC44_RS20480 4024166 .. 4024180 -  -2.9  -3.39432   AAACGATCCAACGAA               TATAC AGATA GTATA               ACAATCCCTTCCTGC  46 117
        pfkA NONE
CHC44_RS20470 4021895 .. 4021919 - -15.1  -5.63517   GTGGCAAAGAAAAAA          CCCGGTAACAT AAT ACGTTACCGGG          TTTATAAACGGTTTA 100 38
CHC44_RS20465 4020944 .. 4020985 - -17.7  -3.37053   AGAGAGTGTAACTAA CCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATCG  GTTTCACATATTTTT 100 116
CHC44_RS20460 NONE
CHC44_RS20455 NONE
CHC44_RS20450 NONE
CHC44_RS20445 4016569 .. 4016584 -  -3.2  -2.90392   GATGGGGCAACCAGA              GCGACA TACC TGTCTC               CTGACGATTTTTTCA  44 114
CHC44_RS20440 4016367 .. 4016406 -  -2.7   -4.4891   GCCAGCAGGACAAAA  GAGCCATCGCTTTGGCG TATCAC CGCCAGCGCGATACATC   ACAGCATCCCCGCCC  63 24
CHC44_RS20435 4016094 .. 4016104 -  -3.2  -3.90729   AATAACGGCGATAAA                 CCCT GGA AAGG                 CGTGTTTATTAAATC  54 179
CHC44_RS20415 NONE
CHC44_RS20410 NONE
CHC44_RS20405 NONE
CHC44_RS20400 NONE
CHC44_RS20395 4007337 .. 4007376 -  -2.8  -3.86571   CCAAATAAAATAACA  GTCATCCCCATCTCCTCGC ATC GGTAAAAGATGGGGAAG-C  GATCTCATTTAACTT  54 34
CHC44_RS20390 NONE
CHC44_RS20385 4006120 .. 4006133 -  -8.1  -3.57144   GCGGTGATCGTGAAA               GCAGC AGAA GCTGC                TAAACAGGCTTAATT  69 130
CHC44_RS20370 4003987 .. 4004013 -  -6.5  -3.83409   CGACAGATGACTAAA         CATCTGCGCCG CCGAC CGGGGCATATG         ACGGCTGAACATTAC  64 153
CHC44_RS20345 3998844 .. 3998859 - -11.8   -5.1675   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 223
        rpmE 3990368 .. 3990397 - -12.3  -4.38712   GTTATCCCTAGAAAA       CAAAAAAAGCGCC CTGC GGCGCTTTTTTTT        CTGGCGGTAACTTAT 100 37
CHC44_RS20285 NONE
        metL 3983040 .. 3983053 -  -5.2  -3.08464   TGATGAGGGAGCGAA               GCGC AACCCG GCGC                TTCGCTCACGAACTT  51 48
CHC44_RS20260 3977979 .. 3978011 -  -4.9  -3.95036   AATCACGCCAAAGAA      TGAGGAATATTCAGC AAA GATGAATTTTCTTCA      TGTCACGCCGCGGCA  61 65
        metF 3976944 .. 3976959 - -10.4   -4.1711   ATGAGTTGTAATAAA              GCTCCC GGCA GGGAGC               TGGAGGTTATAAACC  85 32
        katG 3974574 .. 3974605 - -15.2  -4.17491   ATTAAACGCGGAAAA      CGTCAGCGACTACC GAAT AGCAGCCGCTGACG       AATTAACCTATCAGA 100 41
CHC44_RS20225 NONE
CHC44_RS20220 3967613 .. 3967646 - -10.3  -2.91593   GATGGCGGCATAAAT     CTCTTATCGGGCCTG TGAG CAGGCCCGATAAACT      TGCGCCATCGGGCAT  72 48
CHC44_RS20215 NONE
CHC44_RS20210 3964434 .. 3964444 -  -2.4  -2.55668   TACTGCCATATTAAC                 CTCC TGT GGTG                 ACCTGAAATCCTGCT  39 10
CHC44_RS20205 3963569 .. 3963585 -  -7.9  -3.79021   CAAAACCTCACGAAA              CAGCACG TTG CGCGCCG              CGGCCCGCGTATCGG  68 514
CHC44_RS20180 NONE
        argB 3955054 .. 3955065 -  -7.2  -3.30243   ACGTAGGCCCGATAA                GGCG CAGC CGCC                 ATCGGGCGAACAAAT  63 43
CHC44_RS20170 3953530 .. 3953555 -  -5.9  -5.40072   TTTTGCGTAAAAAAA         CCCGGCGTCGC TGAT GCTCGGCCGGG          CAGTATTGCCTGATG  87 59
CHC44_RS20160 3952070 .. 3952091 -  -5.9   -3.5627   ATACCATTCCGGAAA           TCAGTTCTG TCGG CAAAACCGA            GCAGCAGTTAACGGC  57 321
CHC44_RS20145 NONE
CHC44_RS20140 3949752 .. 3949789 - -11.3  -3.16336   ACCGCAAGGTAAAAT   GTACGTCGGATGGCCGGT TAT ACCG-CCATCCGGCATTC   GCACACTATTCCGCG  81 31
        btuB NONE
CHC44_RS20125 3945260 .. 3945272 -  -4.9  -3.16068   TCTTCAATTTAAAAG                TTTGA TGC TCAAA                GAATTAAACTTCGTA  52 387
CHC44_RS20120 3943679 .. 3943692 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGTTTCTT  40 36
CHC44_RS20115 3943518 .. 3943531 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
CHC44_RS20110 3943321 .. 3943354 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
CHC44_RS20105 3940204 .. 3940215 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf 3940031 .. 3940080 - -18.9  -2.62616   CCATCCGGCAGACTA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGACCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
CHC44_RS20095 NONE
CHC44_RS20090 3937889 .. 3937906 -  -9.1  -5.57729   AAATAACAGAAAAAA             GGGGAGC ACCG ACTCCCC              TTTTTTACTATTCGG 100 33
CHC44_RS20070 NONE
CHC44_RS20065 3936283 .. 3936303 -  -2.5  -3.05816   TCATTCTGCACTGAA            TATCGAGAG AAA CTCTCTTTA            TTCGAGCCGGTAAGC  43 81
CHC44_RS20060 NONE
CHC44_RS20055 3936019 .. 3936035 -  -4.3   -3.3071   ATATCACCACATCAA              CCAGGCA ACA CGCCCGA              CTTGTTGAATGCTAA  52 76
         tuf 3934734 .. 3934751 - -11.3  -4.60924   GAAAGCGTGCAAAAA             GGGCATC AAAT GATGCCC              TTTTATTGCGCATTG 100 60
CHC44_RS20045 NONE
        nusG 3933558 .. 3933586 - -17.6  -5.35224   CCCATAAAAACAAAA        GGCGCGAAATTG TATGT CAATTTCGCGCC        CTATGCAACGATTAG 100 65
        rplK NONE
CHC44_RS20030 3932283 .. 3932319 -  -6.6  -2.80513   ATATTTCAACAGAAT   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGACTAATCTTA  55 38
CHC44_RS20020 3931409 .. 3931422 -  -8.1  -3.89695   GCTTGATAAAGACAA               CTGCG ATTA CGCAG                CTTCTTTTGCATCGC  72 18
CHC44_RS20015 3930918 .. 3930943 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTGATTTCT 100 65
        rpoB 3926589 .. 3926618 - -13.6   -3.4252   TCGGAGTTAGCACAA       TCTGGTGTCGGG TTTTAC CCCGACACCAGT        GACCTGTTTGAGCGA 100 44
        rpoC 3922300 .. 3922329 -   -10  -2.53164   GTATCCAGCATGAAG       CTGGTGGAGGGA TAAATG CCCCTCCACCAT        TTAACGATTACTCGT  70 33
CHC44_RS20000 3921582 .. 3921606 -  -2.3   -3.6796   AATAGACTTTAATAA          CTTAGATTTAT GGG ATAAATTTAAA          GTCACATTTGGACTC  49 388
CHC44_RS19990 3921290 .. 3921306 -  -7.3  -3.49077   CTGAGAAAAAGTTAA              GCCAGAT GTA ATCTGAC              AGATATCTGTATAAA  65 54
CHC44_RS19985 3920925 .. 3920948 -  -8.8  -4.67234   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC  89 31
CHC44_RS19945 NONE
CHC44_RS19940 NONE
CHC44_RS19935 NONE
CHC44_RS19930 NONE
CHC44_RS19925 NONE
CHC44_RS19920 3909902 .. 3909912 -  -8.2  -2.65993   ACTATACGCAGACCA                 GCGC GCT GCGC                 CAGCAACTGATATCC  56 322
CHC44_RS19910 NONE
CHC44_RS19905 3906411 .. 3906421 -  -2.4   -4.4648   AGCTGGATGAGAAAA                 CCTC CGA GTGG                 GACGAACGCGCTTCA  62 334
CHC44_RS19890 NONE
CHC44_RS19885 3901640 .. 3901653 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 36
CHC44_RS19880 3901442 .. 3901477 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     CTGATGGCAACGCCT  79 61
CHC44_RS19875 3898326 .. 3898337 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf 3898153 .. 3898202 - -22.5   -2.7035   CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
CHC44_RS19860 3896288 .. 3896303 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               TGATTCAACATGCTG 100 71
CHC44_RS19855 NONE
CHC44_RS19850 NONE
CHC44_RS19845 3890776 .. 3890792 -  -6.5  -3.17527   TATTTATGACGAACA              CCGCGAA CCG TTTGCGG              CCCTCTCTATTTCCG  56 523
CHC44_RS19830 3886041 .. 3886063 - -14.2   -3.4214   ATTGTAAGAAAGAGA           CAAGGCACCC AAT GAGTGCCTTG           TATGTTGTAAGGAAA 100 58
CHC44_RS19825 3884140 .. 3884191 - -20.4  -3.12999   CCAGGCCACATTGAA TGCCGAATGGCG-GGCCTACG CGCATGTTCTC CGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 32
CHC44_RS19815 3883265 .. 3883280 -  -3.2  -2.78463   ATTTTGCGGATTATA              CCTGTA ATTT TTCAGG               CGATACCAGATGGCA  43 5
CHC44_RS19810 NONE
CHC44_RS19805 3881362 .. 3881380 -    -6  -3.53224   TACTGGTCCGGGAAA             CCGATTGT TGA AAAATCGG             GCGAAACGGCAAAGG  60 415
CHC44_RS19660 3859244 .. 3859261 -  -4.7  -3.10796   CGCTATCAGGCAATA             CGCTGCC GGAT GGCGACG              CAAACGCCTTATCCG  49 98
CHC44_RS19650 3855743 .. 3855760 -    -7    -5.626   TATCTTATAAAAAAA             GCCGAT GTGAAT ATCGGC              CTTTTTATTATCTTA 100 125
CHC44_RS19645 3855134 .. 3855155 - -11.7  -4.13014   TCCAGAGGGGCAAAA           TAACCACAC CGGA GTGTGGTTA            TGGTTAAACGTACCG  93 44
CHC44_RS19640 NONE
CHC44_RS19635 NONE
CHC44_RS19630 3851539 .. 3851553 -  -2.1  -3.28924   GAGGTTTCTGTATAA              CG-CAC AAAT GTGACG               GGCATCTATATTTTT  45 114
CHC44_RS19625 3850938 .. 3850957 -  -5.6  -2.75183   AGTTTTATCGAAGTA            CCTGCCCG GCAA CGGGCAAT             GCCACTGCCCTCAAG  50 157
CHC44_RS19605 NONE
        lamB 3844135 .. 3844146 -  -7.2  -2.57581   CCAACCCAAACATAT                CGCC GAAT GGCG                 GCTGGCGCCTTATTC  57 113
CHC44_RS19595 3843100 .. 3843119 - -11.4  -5.75599   GAAATGACAAAAAAA            GGTGCGCC AGGA GACGCACC             AGTTGCTGCAAAATC 100 59
CHC44_RS19590 NONE
        ubiA 3841505 .. 3841531 - -13.1  -3.54543   AGCCAGTGCCTGAAA        TGCCCGATG-GC GTAA GCTCATCGGGCA         ACTGATATGACGTAT 100 83
CHC44_RS19575 3838474 .. 3838489 -    -4  -2.84839   TATATACAGTTAAAG              GTGATT TTGG AACCAC               AAACGGCGCAAAAAA  46 67
CHC44_RS19570 3837753 .. 3837774 -  -5.1  -3.30124   CCGTAGGCCTGATAA           GCGCAGCGCC ATC AG-GCTGCAC           GATTGCCGGATGACG  54 65
CHC44_RS19565 NONE
CHC44_RS19560 NONE
CHC44_RS19555 3835588 .. 3835598 -  -6.8  -3.85698   GGTTTTGTCCATAAA                 GTGG AAT CCAC                 CAATAGTTATGTGGT  65 396
CHC44_RS19545 3833766 .. 3833786 - -18.3  -3.70068   TAGCATAACGCTAAA            CCGGAGGCG TAG CGCCTCCGG            TGAAAGCACCTCAGA 100 36
CHC44_RS19540 3832657 .. 3832680 -  -4.5  -5.07523   GATATATAAAGAAAA          CGCCCTGCA AGACCG CACAGAGCG           TGGTGAGATTGACTA  77 56
CHC44_RS19535 3832145 .. 3832165 - -12.6  -2.54371   CTCTGCAAAGAAATT            GGGCTTCC ACCCG GGAAGCCC            TTTCTTTTTTTGTTC  81 161
CHC44_RS19525 NONE
         alr 3828514 .. 3828540 -  -8.7  -3.48924   CCATGCGCGATACAA        GCCGGATAAGCG CAAG CGCC-ACCCGGC         CCGCCGCGTATTTAA  71 37
CHC44_RS19515 3827045 .. 3827077 -  -2.8  -5.00616   TCTTTGCTCAAAAAA     CTATCTGACCATAAC GCCA GTAACGGTCAAA-AG      GAAGGATTATCTGCG  76 121
        aphA 3826248 .. 3826266 - -10.3  -5.13521   AAATCACGCAAAAAA             GGAGAGC CTGAC GCTCTCC             TGATTTTTAGTACTC  93 32
CHC44_RS19505 NONE
CHC44_RS19500 3825290 .. 3825300 -  -4.6  -2.77947   CAATAATGCGCAAAT                 CGCC CTC GGCA                 GCCGTATCCGGTCTA  45 94
CHC44_RS19480 3821458 .. 3821470 -  -3.3  -3.07043   CGTAGCATTTTAATA                GCTGC GAT GCAGG                TTCTAGGTCACTCGC  45 105
CHC44_RS19475 3820773 .. 3820792 - -12.2  -4.69053   TACCAGGTAAGAAAA            TGCCTGGT TTAC ACCAGGCA             TTTCAGCAGACGAGA 100 86
CHC44_RS19465 NONE
CHC44_RS19460 NONE
CHC44_RS19455 NONE
CHC44_RS19450 NONE
CHC44_RS19445 3798478 .. 3798501 - -12.4  -4.00868   TTATCCATAAGTAAA          CCCCCTCACC CAAA GGTGAGGGGT           CTCCGTTATTATGCG 100 34
CHC44_RS19440 3796324 .. 3796364 - -13.6  -3.55444   TGCCGACTCGTTAAA  TGACAAAAAAGACCCGTT TGTGC AACGGGTCTTTTTTATTA  AGCAGTACCACCTGA 100 65
CHC44_RS19430 3793522 .. 3793537 -  -6.1  -2.87769   ACGCATCAAACATTA              GGCGA GTATAT TCGCC               AGCGCCGTCTCCTGT  51 171
CHC44_RS19420 3792766 .. 3792791 - -13.4   -4.4572   AAGACCGGAAACAAA         CTAAAGCGCC CTTAGC GGCGCTTTAG          TTTTAGGTGAGCTCA 100 61
CHC44_RS19415 3791763 .. 3791773 -  -3.2  -4.17958   AATATGCTCAATAAA                 TCGC CAG ACGA                 TGCGCAAACGTTATC  60 118
CHC44_RS19405 3790123 .. 3790155 - -13.6  -4.07885   GATGTGTCCTGAAAA     TG-AAAACGGGCGAC CAAC GCCGCCCGTTTTTCA      GAATGAAGGCAGAAC 100 40
CHC44_RS19395 3788374 .. 3788394 -  -8.4  -2.82623   CCGGGCCTACAAGGA            CTACTGAT TTTCT ATCAGTAG            CGCTTCCATCAAATC  64 5
CHC44_RS19385 NONE
CHC44_RS19380 3786157 .. 3786199 -  -5.7  -3.14132   GGGCGTGCGCATTAA TCTTACCGTTTCCTCCGGCCC TGT GGGTCGGAGGAAA-A-TCAGA ACATCACCCTCGCCA  54 21
CHC44_RS24235 3783958 .. 3783969 -  -5.8   -4.1021   CGTCATAACCATAAA                TGCC GGAT GGCA                 ACGCGAACGCGTTTT  65 72
CHC44_RS19360 NONE
        nrfA NONE
CHC44_RS19350 NONE
        nrfC NONE
        nrfD NONE
CHC44_RS19335 NONE
CHC44_RS19330 3774825 .. 3774845 -    -4  -3.35679   TGTTTTTATGCATAA            TAACGCGA GTTTA TGGCGTTA            ATGATGAATAACTAT  50 166
CHC44_RS19325 3772856 .. 3772878 -  -2.7  -4.21194   CCGGACTACCCAAAA          GCCATCTCGC TGCT GCAAAA-GGC           CTCTGAAGATCTGGA  58 478
CHC44_RS19290 3765161 .. 3765175 -  -2.9  -2.87344   TATGCCCGCGAGAGA               TTAAG CGAAC CTTAA               GCGCGAAATTTATTC  42 35
        pmrR 3764981 .. 3764996 -    -9  -3.96483   ACCGTACGGAAAGAA              CAGGCA CCCG TGCCTG               GGTGCTGTTGAAAAA  79 55
CHC44_RS19245 3753873 .. 3753893 -  -6.1  -3.64599   TTAGTAGAGGTTAAA            CGCCGGA TCTGCCG TCCAGCG            CGGCTGGAGATTAAC  62 36
CHC44_RS19240 3752302 .. 3752315 -  -3.7  -3.91488   AACTGCGCGAAATAA               CCTGG CAGG CCCGG                CGTTCTCCCGGGCCG  57 100
CHC44_RS19210 NONE
        dmsB 3742720 .. 3742730 -  -3.2  -2.53382   ACCAGCGGTAACTCA                 TGCA TGG CGCA                 CCTCCCGAATGTTCA  42 12
CHC44_RS19200 3741951 .. 3741962 -  -2.2  -5.03747   AAACCGGGCAAAAAA                CTAC ATTG GCAG                 CGTCCACAGATTGTA  71 14
CHC44_RS19195 3741206 .. 3741234 - -12.5  -3.92592   AGCTGTAATAGTAAA       CTGTGCCCGCTG ACGCAA CAGCGGGCAC-G        ATGGCGGCACAAGTA 100 73
CHC44_RS19185 3738401 .. 3738420 - -10.7  -5.97575   AATTTATAAAAAAAA            GCGGCAG ACTACG CTGCCGC             AAATATGAGGAGGAC 100 194
CHC44_RS19175 3737004 .. 3737014 -  -3.2  -4.05629   AGGAAATTGAAACAA                 GAGA ACA CCTC                 ATTCAGCGAAGTTTA  56 507
CHC44_RS19150 NONE
CHC44_RS19145 3733474 .. 3733492 -  -3.1  -5.42862   ACAGGCTCAAAAAAA             GAGACCA GATTT CAGTCTC             TTTTTTATCACTCAT  81 53
CHC44_RS19095 3724095 .. 3724136 -  -5.2  -2.77861   CGAAGCGAAAACGCA TGGCGTAAGACG-TATCTG TTGGC CGGATAACGCCTCACGCGA CTTATCCGGCCAGCA  49 50
       groES NONE
        groL 3720430 .. 3720465 - -18.4  -4.37971   AAAAGATGACTAAAA    GAAAAACCCCCGGTCA TTTC TGCCCGGGGGTTTCTC     AATTCTGGGAGATAA 100 162
CHC44_RS19075 3719961 .. 3719991 -   -17  -2.79809   GAAAAACGCTAACCA       TATCGCCCTCTGAA TCT TTCAGAGGGCGTTA       CGATTCAGACATATC 100 39
         efp 3717142 .. 3717163 - -12.3  -3.01831   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  83 45
CHC44_RS19055 NONE
CHC44_RS19050 3716696 .. 3716733 -  -8.6  -4.36914   TGCTTCCGGAGAAAA   TCGATTAACGGTACGAC GCCAT GCCGTACCGTTGAT-GA   TTACTGCTGAGCTCT  84 26
CHC44_RS19040 3715448 .. 3715459 -  -5.8  -4.93877   TCTGAGGAAATAAAA                CAGC AAAT GCTG                 GCCGTCGCGACCCGG  83 108
CHC44_RS19010 3710241 .. 3710257 -  -9.4  -4.43221   AAATATGCTACAAAA              TGGCGC TTATT GCGCCA              TTTTATCTCGCGAAA  86 56
CHC44_RS19005 3708519 .. 3708551 - -11.9   -4.1552   GATCCGGGCAAGAAA      TGCCGGATGCGACCC GTC GGGTCTTATCCGGCC      TACGGTCTTTACTCC  95 34
CHC44_RS18985 3702028 .. 3702049 -  -4.4  -3.96624   TATTTGCAGGATAAA           CAACAAGC TATCAC GCCTGTCG            CCTATGACAGCTATC  60 365
CHC44_RS18975 NONE
CHC44_RS18970 NONE
CHC44_RS18965 NONE
CHC44_RS18960 3700451 .. 3700466 -  -4.6  -3.14132   TGCGCCGTGGAGTAA              TGCCGT CATT ACGGCG               CTGGAAAGCCGCAAG  50 457
CHC44_RS18950 NONE
CHC44_RS18945 NONE
CHC44_RS18940 NONE
CHC44_RS18935 NONE
CHC44_RS18930 NONE
CHC44_RS18925 3692922 .. 3692956 -  -7.2   -3.6279   AAACCCTCTTAATAA    CCA-G-CGGGGGCG ATTATCCGA CGCCCCCGACATGG    ATAAACAGCGCGTGA  67 43
CHC44_RS18920 NONE
CHC44_RS18915 NONE
CHC44_RS18910 3689080 .. 3689115 - -14.2  -4.37092   ATCGCCCTTATAAAA    GAAAACCACCGGCATCC TTT GGATG-CGGTGGTTTTG    CTGGTCTAAAACCGC 100 51
CHC44_RS18905 NONE
        purA 3687375 .. 3687409 - -11.6  -3.10975   AGCGAGGATTTAACA    CTGTGTCGGAT-AGC GTAATG GCTTACCCGACACAG     CAATGTATCACACTG  79 80
CHC44_RS18895 NONE
CHC44_RS18890 3684329 .. 3684349 - -11.2  -2.64877   CCTACAGATAATTGA            CCCTCTTC TGTTT GAAGAGGG            TATTGCTCACTCTGC  77 32
CHC44_RS18885 3683489 .. 3683506 -    -7  -6.38655   AAAGATAAAAAAAAA             CCATCC GATTAT GGATGG              TTATTTTCTTAAAAA 100 53
CHC44_RS18880 NONE
CHC44_RS18875 NONE
CHC44_RS18870 NONE
CHC44_RS18865 NONE
CHC44_RS18860 NONE
CHC44_RS18855 NONE
CHC44_RS18850 NONE
CHC44_RS18845 3676447 .. 3676461 -  -6.4    -3.737   TAATGTTGCAGGAAA               CCCACA GGA TGTGGA               GCGGATTATCGCCCT  60 185
CHC44_RS18830 3674851 .. 3674871 -  -3.9  -4.60487   GATTACCGGCAAAAA            TGCCAATCC GCA GGTTTTGCA            ACAGCTTGAAGCCCA  69 62
CHC44_RS18815 3671220 .. 3671234 -  -2.8  -4.48987   CGGTCATAATCAAAA               CTCCTT ATT AAGCAG               ACTGTTCTGCCAGTT  63 18
CHC44_RS18810 NONE
CHC44_RS18805 NONE
        ulaD NONE
CHC44_RS18795 NONE
        araD 3667970 .. 3667980 -  -6.8  -3.29324   GCCACGGAAAGTGAA                 GCCA ATC TGGC                 GCTGAATGAAGAGGC  61 263
CHC44_RS18775 NONE
CHC44_RS18765 NONE
CHC44_RS18760 NONE
        rpsR 3666382 .. 3666392 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GACC                 GATTACTGATGGCGA  39 28
CHC44_RS18750 3665848 .. 3665878 - -11.9   -5.0133   GATGGGGTTAAAAAA       GCAAAACGTCGGC GCTGG GCCGACGTTTCGT       TGCTAGCAAAAACGA 100 51
CHC44_RS18745 3664477 .. 3664490 -  -5.9  -3.32865   GGAAGAACAAAACCA               GCCGC AGAC GCAGC                CTTTCCAGCAGGATA  56 365
CHC44_RS18735 3663257 .. 3663295 - -14.7  -2.55213   CATCTACTGAAGTCA  GGTTGCCGGATAA-GGCG TTTA CGCCGTCATCCGGCAAAC   CCGGGGCGCTTACAG  89 35
CHC44_RS18730 3661491 .. 3661518 -   -12  -2.87146   TGGCCGGAGAATAAT        CGCCAGCCGGGCA TTT TGCC-GGATGGCG        GCTGTAAACGGCGCC  80 108
CHC44_RS18710 3658095 .. 3658118 -    -3  -4.48987   GGCGCAGAATCAAAA          CGCGCGGGCGA AAT CCATCCG-GCG          GCGGATAATAACTGG  64 263
CHC44_RS18695 3655235 .. 3655245 -  -2.4  -4.32402   TGGCAATTAAAAGAA                 GAGG GAT CCGC                 CGTCATCGTGCTTGA  60 127
CHC44_RS18680 3654206 .. 3654226 - -16.9  -3.50335   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 66
        tamA 3650082 .. 3650092 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATATAAAACTGTAA  46 5
        tamB NONE
CHC44_RS18655 3645920 .. 3645942 -  -9.9   -5.1925   CCAGAATGTAAAAAA          CAACGCCACC CGAG GGTGGCG-TG           TTCAGTTCAGGGCTG 100 32
         mpl 3639773 .. 3639794 - -12.3  -4.52857   ATGCCCCATATAAAA           CAGCCAGCC ACAA AGCTGGCTG            ACCGCATAGTCATTT 100 39
CHC44_RS18620 3638446 .. 3638474 - -15.4  -2.64595   AAGTTTCACCACAAT        GCCGATGATCGC TAAAT ACGATCATCGGC        TTGTTTTTTTACTCC  93 34
CHC44_RS18605 3635060 .. 3635087 - -17.2  -2.71263   AAGGTTGTGTAACCA        GCGGAGAATATC TCTG GATATTCTCCGC         TAATATTGGAGAGGT 100 42
CHC44_RS18585 3631098 .. 3631117 -   -10  -5.72622   CCGACAAATAAAAAA            TGGCCGCA GTAT TGCGACCA             TTCTCATGACGATTA 100 55
        iolE NONE
CHC44_RS18575 NONE
CHC44_RS18570 NONE
CHC44_RS18565 3626303 .. 3626336 -  -3.7  -2.71712   TTTTCTGCGCCAAAT     TTCCCGACCGTTACG GCGG CGCCACGGTCGCAAC      CTTTTCACTACTGGT  43 353
        iolD 3621014 .. 3621041 -    -2  -5.10163   AACCGCAAAAGAAAA        GCATCCGTAATTC TGC GAAAAACGGAT-C        GTTTTATTTTGCCGT  71 129
        iolG 3619893 .. 3619918 -  -8.3  -4.52589   CCTCGGTATAGAAAA         GCTCTCACACT TTTC AGTGCGAGAGT          TTCTTCATTATTAAT  87 49
CHC44_RS18540 3618558 .. 3618586 -  -7.6  -5.03314   CGTAGGGTGAAAAAA       CCGGC-TTTATCA ATCT TGATAAAAACCGG        TTTAATTTAGTGATG  86 82
CHC44_RS18535 3617661 .. 3617689 -    -9  -2.91695   GTCACCTGGAAATTA       GCTGTATCATTGC AACA GCAATGACAC-GC        TGCGATTAATTTGTT  67 3
CHC44_RS18530 3616685 .. 3616712 - -12.1  -3.55622   GGTAATTGCCGCAAA        TG-ACCGCGCCA GCCTG TGGCGCGGTACA        GGCAAATCCACCCGT  88 43
CHC44_RS18520 3614626 .. 3614662 -    -8  -3.65201   TAATACCCTGAATAA   TTCGAGTTGCAGGCAGC CAAC GC-GCCTGCAGCCTGAA    GTATGACGGGTATTA  69 38
CHC44_RS18515 3614139 .. 3614188 -  -6.5  -2.79183   GTGATGGGTATTACA GTTTGCCGGATGGCGACCT-GC GGATAAA GCGAAGCCGCCATCCCACAAAA ATTAACGATACTTCT  53 27
CHC44_RS18510 NONE
CHC44_RS18505 NONE
CHC44_RS18500 3612899 .. 3612912 -  -3.1  -5.06414   CCTTTTTAATAAAAA               TCAGCG TTT CGC-GA               CGAAATCCACCCTGT  74 12
CHC44_RS18495 NONE
CHC44_RS18490 NONE
CHC44_RS18485 NONE
CHC44_RS18480 NONE
CHC44_RS18475 NONE
CHC44_RS18470 NONE
CHC44_RS18465 NONE
CHC44_RS18460 3605363 .. 3605401 -  -6.7  -3.42996   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  62 513
        mgtA 3595097 .. 3595132 -  -5.4  -3.08046   GGTCGATCCGAAAAC    CGGTGCCGTAGCGGA AGACGTA TCCGCTCAGGCAC-G    TCAGTCGCTGGAAAA  50 349
CHC44_RS18370 3586275 .. 3586285 -  -4.6  -4.41633   CATGGCGAAAAAGAA                 CGGC GGC GCCA                 TCACCCTGACCGAAG  68 467
CHC44_RS18360 3585027 .. 3585048 - -10.9  -5.41746   AACCTGTTAAAAAAA           TACGACAGC AGAC GCTGCCGTA            CCGTCATACTATGCA 100 44
CHC44_RS18340 3581107 .. 3581124 -  -7.7   -3.9712   CCAGCCGATGACAAA             GGTC-CGG TTT CCGTGACC             AAAATCATCGACGGC  71 422
CHC44_RS18310 NONE
CHC44_RS18305 3573786 .. 3573827 - -13.9  -3.53444   GGATGGCGGCGGAAA GGACTTATCAGGCCTAC GGGTCATG GTAGGCCTGATAAGCGC  AGCGCCATCAGGCCT 100 54
        idnK 3568282 .. 3568299 -  -5.5  -4.14392   CCGGAAGCGTTAAAA             GCACTGG CGGG CCAGTTC              GATCTCATTATTAAC  65 377
CHC44_RS18270 3567217 .. 3567227 -  -3.2  -3.09785   GTAGACTTTAATAGA                 CCTG AAA CAAG                 AAGTAGGATATCTAA  45 95
CHC44_RS18260 3565051 .. 3565061 -  -8.2  -3.26473   CTAAATTATTAGGAA                 GGGG AAC CCCC                 CTTCCATTGTTATTT  64 35
CHC44_RS18245 3561946 .. 3561975 - -10.2  -2.76453   CGATAACGTGAAGCA       GGAGGTATAGCCT ACAAG AGG-TATACCTCC       GTTTAAAAGTATGCA  71 46
CHC44_RS18225 3558835 .. 3558845 -  -3.2  -3.05816   TCAGCCTTCACTGAA                 TGCC ACA GACA                 AGGGTTATTCAACTA  45 127
CHC44_RS18220 3557476 .. 3557495 -  -2.8  -5.47159   CCGCAACAGAAAAAA            TTACGCTA TGAA TAGCGCCA             CATTACTCTAATTCA  83 252
CHC44_RS18215 3556451 .. 3556481 -  -8.3  -5.55664   TCATCACTAAAAAAA       CAGACGGCAGAAC AAAAA ATTCCGACGTCTG       AACAAATTTAAATAA 100 79
CHC44_RS18210 3555529 .. 3555543 -  -7.8  -2.94099   TCGTCGTAGGATATA               GCGTCG GCG CAACGC               TCGCATGGCTAAGTG  56 351
CHC44_RS18200 NONE
CHC44_RS18195 3554039 .. 3554059 -  -8.9   -4.4773   CTACAGGAAGTAAAA            CGTGGACTG GGC CTGCCCACG            CTATTCCAGGTATAA  88 41
CHC44_RS18185 3551642 .. 3551658 -  -3.6  -3.81141   GTGTATATAAAAAAT              GCCGTT TTATT AGCGGC              TATGCGTAAAAATCA  56 181
CHC44_RS18175 3550400 .. 3550410 -  -3.2  -4.32034   CTATCACGATGAAAA                 CCTG CAA CAAG                 CGCCGTTTGATAATA  62 456
CHC44_RS18130 3541214 .. 3541234 -  -6.7  -3.07104   CGATAATTATAGAGA            GCGTTGCCC GGC GGGCACCGG            GCCTGCAACATTCAG  58 53
CHC44_RS18125 3539575 .. 3539587 -  -4.8  -4.84761   ATATCGGGATAAAAA                GCAC GGTTA GTGC                AACGTGGATAAATAA  77 149
CHC44_RS18115 3539054 .. 3539068 -  -2.8  -4.26903   TGTACTCTATTAAAA               GCATTT CCC AAAGGC               AAAATTCATGCAGCA  58 298
CHC44_RS18075 3530739 .. 3530752 -  -2.3  -4.07885   GATGCTGGTTTAAAA               TCGGC CTGC GCGGA                CTGCCAGGCCTGGTA  55 121
CHC44_RS18070 3527702 .. 3527728 - -10.8  -2.67662   ATAAAAGAGAGCAAG         CGGCGTGCCA GAAAAAG TGGCGCGCCG         GAAAAAGAAGCGGGT  74 57
CHC44_RS18065 NONE
CHC44_RS18060 NONE
CHC44_RS18055 NONE
CHC44_RS18050 3525138 .. 3525149 -  -2.2  -4.17048   TCCCTCTTAAAATAA                CCCT ATCC AGGA                 ACCGAAAACTCCCAC  57 5
CHC44_RS18045 NONE
CHC44_RS18040 3522911 .. 3522939 - -10.1  -2.92921   AGAGAAGGTCATATA        TGCCGGGTGCGGC TGC GCCTTACCCGGCC        TACACATCATCTTTA  72 113
CHC44_RS18005 NONE
CHC44_RS18000 3514790 .. 3514802 -  -6.9  -3.53012   CTGGTGGTCGCGAAA                GGCGA TGC CCGCC                TGGATAATAAGAAGC  60 339
CHC44_RS17980 3511469 .. 3511508 -  -3.5  -3.28924   TAGTTGGCCTGATAA  GCGCAGCGCCATCTGG TTGCATGTG CCGGATGGCGACGC-C  AGGCGTCTTATCCAA  48 514
CHC44_RS17955 NONE
CHC44_RS17950 NONE
CHC44_RS17945 3508812 .. 3508822 -  -6.8   -2.8805   ATCAGTGTTTACACA                 GGAG CTG CTCC                 AGTTCGCTTAATGAC  56 1
        prfC 3507087 .. 3507106 - -16.4  -3.33483   CAGGGAAAGTACGAA            GGCGCGGC GGAT GCCGCGCC             CGGAAAGGGATCAGT 100 36
CHC44_RS17935 3506059 .. 3506085 - -14.5  -2.62184   GTGTGGTGCACATTA        CG-CCTCCCGAC AAAC GTCGGGAGGACG         AATTACGACGAATTA  87 38
CHC44_RS17930 3505759 .. 3505777 - -14.6  -4.28049   GCTAAAACCGTAAAA             GCCAGTCC GCT GGACTGGC             TTGATAGCAATATAT 100 56
CHC44_RS17925 NONE
CHC44_RS17920 3503710 .. 3503721 -  -5.8  -3.75629   TATGGCGAAGCGAAA                GCCT GGCC AGGC                 GCGACGCCGCAAGAG  61 145
CHC44_RS17905 3500289 .. 3500318 -  -2.2  -3.60884   GGGAAAAGAGTAGAA      GGC-TTACATCGCC GGAT GGCGGT-TAACGCC       TTATCCGGCCTACAG  49 91
        deoA 3498919 .. 3498929 -    -4  -3.23855   TGCTTCAAAAATAAT                 TGAT CAG ATCA                 GTATACAACTATTCA  48 34
        deoB NONE
        deoD 3496698 .. 3496730 - -12.1  -4.49556   TGCTGACGAAATAAA     CGATGAAGGGGGCC TGCTCT GGCCCCCTTCA-CA      ATCTTACTCTTTATC 100 29
CHC44_RS17850 NONE
        serB NONE
CHC44_RS17840 3486883 .. 3486895 -  -5.5  -3.30124   CCGTAGGCCGGATAA                GACGC ATT GCATC                GCCATCCGGCAAATT  56 66
CHC44_RS17835 3485437 .. 3485481 -  -5.6  -4.42806   GTATTGCCAAATAAA TGTCTGAATGCCGGGT-GGCG CTTG CGCTTACCCGGCCTACAAACC CAGCGATTCCAGTAC  70 97
CHC44_RS17820 NONE
CHC44_RS17815 3481166 .. 3481216 -  -6.1  -3.33261   TTGTAAGCCTGATAA GCACAGC-GCCATCAGGC-ATTTCG CAG CGATGTTGCCGGATGGCCGCTTCGC CTTATCCGGCCTACA  59 47
CHC44_RS17805 3479644 .. 3479654 -    -4  -3.23692   GACGATGAGCAGGAA                 GTAT TCT ATAC                 CACCGCACTGCCGCA  47 296
CHC44_RS17795 NONE
CHC44_RS17790 NONE
CHC44_RS17785 NONE
CHC44_RS17780 3474719 .. 3474739 -  -5.3  -4.46212   CGCGCTACTATAAAA            CCGCCGCCA CGG TAACGGCCG            GGCAAGCGAATGCCA  70 127
CHC44_RS17735 3466163 .. 3466175 -  -3.4  -3.73968   AAATTTGTGATGAAA                GCTA GCATT TAGC                TACGATGATTTCATC  53 122
CHC44_RS17730 NONE
        thrL 3464860 .. 3464882 -   -12  -5.75342   CTGGTCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 41
CHC44_RS17720 NONE
CHC44_RS17715 NONE
CHC44_RS17710 3459746 .. 3459758 -  -9.1  -3.38326   GATAAGCTCAACGAA                GCGCT TGA AGCGC                AGGGCGATCGGGTGG  66 409
         tal 3456552 .. 3456562 -  -5.4  -2.68487   TTAATGATTACAGCA                 GATC GCC GATC                 ATTTTTTCCAGTTTT  50 7
CHC44_RS17690 3455749 .. 3455769 -  -3.9   -2.5934   TGCTAAACGAGCAAT            TTGGCCGCA CTA TTCTGCCAA            TCGGCGAGGCGCACT  44 99
CHC44_RS17670 3451597 .. 3451623 -   -18   -2.9518   CTTAACATGCATACA         CGGGCGGAGAGG AAA CCTCTTCGCCCG         TGCCAGTAATTACCC 100 54
        dnaJ 3450381 .. 3450400 - -11.4  -5.29782   TACAGGCAGAAAAAA            GCCCGGAT ATAC ACCCGGGC             TGAAGAAAAATACAA 100 52
CHC44_RS17660 3449088 .. 3449100 -  -4.9   -3.6106   TTTAACACTCCGAAA                TCATT ATA AATGA                ATAATTAACACAAGG  57 124
CHC44_RS17655 3448694 .. 3448709 -    -9  -4.16146   AAAAGACGCGTAAAA              GGCTCA CGGA TGAGCC               TGATACTGCAAATGA  82 44
CHC44_RS17640 3445136 .. 3445153 - -14.1  -4.36914   CCCTGGTGGAGAAAA             GCCCCGG TAAA CCGGGGC              TTGAATCATGAAGCC 100 66
CHC44_RS17635 3442038 .. 3442067 - -11.6  -4.25104   GGGGGCGCAGGAAAA       GAGATTCGAAAG AACGCG CCTTCGAATCTC        AAACTAATAGTCCAG  93 64
CHC44_RS17630 3441127 .. 3441137 -  -4.6  -3.15078   GATAGTGCATTAATA                 CGCC ACT GGCA                 GTTTTCCGAGCGCCG  50 9
CHC44_RS17625 3440136 .. 3440154 -  -5.3  -5.69473   CAGACGAGAAAAAAA             TCCCGAT AAGGA ATCAGGA             ATAAACCATGCTAAA 100 20
CHC44_RS17620 NONE
CHC44_RS17615 NONE
CHC44_RS17610 NONE
CHC44_RS17605 NONE
CHC44_RS17600 NONE
CHC44_RS17595 3433918 .. 3433937 - -11.4  -3.58533   CGATAAGTTCGGAAA            GCCTCCCG CTAT CGGGAGAC             GCCTAAAAAAAAGTT  87 39
CHC44_RS17590 NONE
CHC44_RS17585 3432225 .. 3432239 -  -5.8  -4.21773   CGTTAAGAGAAATAA               TATCAT TAC ATGATA               AAAAAGTGCTAAAGG  67 502
CHC44_RS17575 3430434 .. 3430447 -  -3.1  -3.58881   AAAGATGATAAAAAT               TGCCGC AAT GCG-CA               TAAAATGTCTGGAAT  49 371
CHC44_RS17565 3428066 .. 3428096 - -14.8  -3.49938   GCAAATAAGCCATAA       TGTTATGCGGTCGA TAA CCGGCCGCATAACA       TACTTAGTTATGCAA 100 33
CHC44_RS17550 3423461 .. 3423496 - -11.2  -4.86731   TTCCCTGAAATAAAA    GAACCTGATCCGG-CAC AGA GTGACCGGATCAGGTGG    GCATCGCCCTAAGTG 100 69
CHC44_RS17545 3422226 .. 3422244 -  -3.9  -3.81948   TAATGTGAGAAAACA             TATTCAC TCCCT GCGAATA             CTACCTTCAAACAAA  55 32
CHC44_RS17540 3420860 .. 3420917 -  -7.2  -2.98447   GTATTCATGATAAAT CTCCAGTGTATTAA-TCTCATCGCCCC TCATG GGGACCACGAAAATTAATACTCTGGAT TTTTAAGCCGTCCGA  59 87
CHC44_RS17535 3419085 .. 3419102 -  -9.1  -3.56704   TTTTTACGAAATGAA             GTCCGAC TTAC GCCGGAC              TTTTTTAGTGCAGTC  73 60
        nhaA 3417775 .. 3417786 -  -5.8  -2.53213   CAATGTCGCAAGGGA                GCGA TACA TCGC                 TCCCCCTTTCCTTCG  49 47
CHC44_RS17525 3416798 .. 3416828 - -18.4  -2.83747   GAACTTGTAGAATGA       TTCCGGCTGCGG GTTAGTA CCGCAGCCGGAA       GTATTACGGTAGGTA 100 44
CHC44_RS17505 NONE
CHC44_RS17500 NONE
CHC44_RS17495 NONE
        lspA 3407867 .. 3407910 -  -5.3  -4.64157   TAAAGAACGATAAAA CCGTAG-GCCGGATAA-GGCG TTTT CACCGCCATCCGGCACCACGT TTGCCTGATGGCGCT  73 90
CHC44_RS17485 NONE
CHC44_RS17480 3406253 .. 3406271 -    -6  -4.78752   ATTACAACCCAAAAA             CCAGCA ACGATTG TGCTGG             TTTTTCAGATGAATA  80 172
CHC44_RS17475 NONE
CHC44_RS17470 3403989 .. 3404020 -  -7.2  -4.40963   AGGCGTGAAAAATAA      CTTTCTCGAAGCGG AGAT CAGCTACGGGAAAG       TGGGCAGGCCGGAGA  79 85
        citC NONE
        citD NONE
        citE 3394309 .. 3394319 -  -4.6  -3.20227   CCTTAATCACGAATA                 CCGG AAG CCGA                 CAGCGCCACCACTTT  50 2
        citF NONE
        citX NONE
        citG 3391276 .. 3391299 - -12.6  -3.45743   TATCAGTAAAAGACA          TGATTCATCC CGCA GGATGAATCA           TTGCTGGAGAGAATG  93 54
CHC44_RS17405 3390254 .. 3390272 - -11.8  -5.26119   GGGGCAAAAACAAAA             GGGCAATA ATA TATTGCCC             TTTGTAATCAATTAA 100 80
CHC44_RS17395 NONE
        carB 3384998 .. 3385017 - -10.8  -5.80817   CGCAAGATAAAAAAA            GGGTTTCT TTAC AGAAACCC             TTTCAACATTATATT 100 79
CHC44_RS17385 3384274 .. 3384299 -  -9.7  -4.64676   GCAGGCCGAAGAAAA         CCGACCGCGCCT GAA AGGCACGA-CGG         ACGTGAAGCCAAAAT  91 128
CHC44_RS17350 NONE
CHC44_RS17345 NONE
CHC44_RS17340 NONE
CHC44_RS17335 NONE
CHC44_RS17330 3373217 .. 3373275 - -14.4  -2.57931   TGTAGGCCGGATAAG GCGTTTCCGCCGCCATCCGGCATTGGCG CCA CATGATTGCCGGATGGCGACGCTACCGC ATCTTATCCGGCCAA  87 63
CHC44_RS17325 NONE
CHC44_RS17320 NONE
CHC44_RS17315 3370616 .. 3370630 -  -2.7  -3.38535   TGAAATAATAAGAGA               GCGCC AGCAA GGTGC               CATGTTACGTCACAA  46 186
CHC44_RS17300 3369775 .. 3369794 -  -2.2  -4.54727   GCTGGGAAATTAAAA            CATAAC TCAATTCT GTTATG             TTGCTTATGAATAAA  61 104
CHC44_RS17295 3367471 .. 3367486 -  -5.4  -3.93768   ATGGCGAATAAAATA              GCCTAA TGGG TCAGGC               ACTTAATCTTTCGCC  63 28
CHC44_RS17290 3367146 .. 3367176 -  -6.9  -2.66316   TCGGTGATGATAGCA       GCCTTAAATCGCT GACCA ATCGGTTTAAGGC       CTTCTTGTCGGGCGG  55 175
CHC44_RS17275 NONE
CHC44_RS17270 NONE
CHC44_RS24190 3364358 .. 3364374 -  -2.3  -2.80195   ACTGATCATTAATTA              TTTCCTG ATA CAAAAAA              AATTGCCGCCACTAT  40 6
CHC44_RS17265 3363829 .. 3363867 - -13.3  -3.02263   ACATCTGGCTCAAGA  GTAG-GCCGGATAA-GGCG TTT CGCCGCCATCCGGCACTAC  AGCGTTAACGACGCT  86 30
CHC44_RS17230 3355432 .. 3355465 - -10.9  -2.83403   TGGCGCTGACCAAAG     CCGCGGAACGGGAGC TAAA ACGCCAGTTCCGCGA      ACGGGAGCCGAAAAA  66 514
CHC44_RS17200 3347923 .. 3347934 -  -3.6  -4.40561   GCCTTTGAAAAACAA                GGCA TTGA CGCC                 GCTCAAATGCCCGGC  66 247
CHC44_RS17180 3342811 .. 3342823 -  -4.8  -3.15544   CGTCAGCGTGATGAA                GCAG GGATT CTGC                TTACCCCGTCCCCCT  52 108
CHC44_RS17175 3341991 .. 3342002 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGCAAAGGAAT  63 43
CHC44_RS17150 3336586 .. 3336608 - -16.4  -5.95539   GCCGAAATAAAAAAA           GCCAGCAGAT ATT ATCTGCTGGC           GGGTGATTTTAGGCT 100 87
CHC44_RS17145 3336024 .. 3336063 - -15.2  -4.34402   GCGTTGATACCAAAA  CGACCAGCAATAAGCGAT ACTC ATCGCTTATTGCTGGTAT   CTATCTTATTTTAAT 100 31
CHC44_RS17115 3329516 .. 3329552 - -16.2  -4.65838   TATATACGCTAAAAA    GCAGAATAAACCAGAA TTTGT TTCTGATTTATTCTGC    CCGGTTTTATCGCTT 100 32
CHC44_RS17110 NONE
CHC44_RS17105 3326870 .. 3326895 -  -7.6  -6.06723   TTTCGCAAAAAAAAA         GCCCAACC GGTGATATTG GGTTGGGC          GATAATTCCTGTTGG 100 149
CHC44_RS17100 3325348 .. 3325365 -  -3.4  -4.07885   CACCGCCGTTTAAAA             CGGACT CAATAT AATCCG              AGAAAAATATAAAGT  57 390
CHC44_RS17095 NONE
CHC44_RS17090 NONE
CHC44_RS17085 NONE
CHC44_RS17080 NONE
CHC44_RS17075 NONE
CHC44_RS17070 NONE
CHC44_RS17065 NONE
CHC44_RS17060 NONE
CHC44_RS17055 NONE
        murG 3314050 .. 3314067 -  -3.3  -3.01422   CACCGCCACAAATTA             TGTCCGGG CAA CCCGG-CT             GACTTCACTGGCGAC  45 5
CHC44_RS17045 NONE
         ddl NONE
CHC44_RS17035 NONE
CHC44_RS17030 NONE
        ftsZ 3308166 .. 3308187 -  -6.7  -3.09208   AAATTACCTATCCAA           CCGAAGTGTA CTA TACA-TTCGG           CGGGCCAGTTTAGCA  58 75
        lpxC 3307151 .. 3307194 - -10.3  -5.90981   GGATAGTAAAAAAAA CGACTGGCTCGCCTGGC CGGAGAGAGT GCCAGGTTAACCAGTCG AATTTTATACGACAG 100 50
CHC44_RS17015 3306397 .. 3306413 - -11.5  -2.79175   AATAAAGTCTCAAAT              GCCCCGC GCC GCGGAGC              TACAAATAAAGTAAA  77 55
CHC44_RS17010 3303546 .. 3303561 - -10.4  -5.28176   TGCATCCATAAAAAA              GCGCAG TCGC CTGCGC               CTTTTTATCTGTGTT 100 140
CHC44_RS17005 3303102 .. 3303132 -  -5.3    -3.409   AAATCGCTAATAAGA       TCGATGGGGATCG TGTTG CGATCCCCCACTA       AGGCGCAAATTGGCG  54 23
CHC44_RS16995 3300605 .. 3300618 -  -8.1   -3.7108   ACGCCCAGATTGAAA               GCTGG CTTG CCAGC                CTGAATCCCCTCACC  68 487
CHC44_RS16975 3298220 .. 3298243 - -14.6  -3.32963   AGCGGGATGGGATAA          GGCTGGCGCA CATT TACGCCAGCC           AGAATATTAGAGGCT 100 32
CHC44_RS16945 NONE
CHC44_RS16940 3292555 .. 3292578 -  -9.6  -3.30124   TTGTAGGCCGCATAA          GCGTTAGCGCC ATC GGCAC-AACGC          TACACTAATGCCCCA  74 25
CHC44_RS16920 3287163 .. 3287176 -  -5.3  -3.72695   ACCTGTCCCATTAAA               CTTTC GTCA GAAAG                CTTAATAAGACAGGT  59 115
        aceE NONE
        aceF 3282513 .. 3282530 - -14.1  -5.88471   GATTATCAAAAAAAA             GCCGGCC GTCG GGCCGGC              TTTTTCGCTTACATC 100 34
        lpdA 3280859 .. 3280874 - -10.4  -5.64274   CCATGCATAAAAAAA              GCGGCT GTAA AGCCGC               TTTTTTGTATCGGGT 100 64
CHC44_RS16900 3280003 .. 3280022 -  -4.9  -4.67234   AGCGAAGGCCAAAAA            GATGGCC TGTACT GGCCAAC             CAAAGCAGGCGACGT  71 343
        acnB 3274854 .. 3274868 -  -2.7  -4.18213   AATCATAAATAAGAA               GCGCC ATTCG GGCCC               GGAAATCCGGGCCCG  58 47
CHC44_RS16870 3272915 .. 3272931 - -13.7  -5.24129   TTCTGCTATAAAAAA              GCCGGGA TAC TCCCGGC              TGGAATGTTTGGCGA 100 107
CHC44_RS16865 NONE
CHC44_RS16860 NONE
CHC44_RS16855 NONE
CHC44_RS16850 3268293 .. 3268311 -  -6.6  -3.53012   GCCCGCTGCCGGAAA             CCGTGGTG GCG CACCTCGA             TAAGAGCCATATCTG  60 521
CHC44_RS16830 3264766 .. 3264785 -   -15  -3.35358   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 76
CHC44_RS16820 3261315 .. 3261327 -  -5.5  -4.56597   CGCTGTTGGGAAAAA                TGCCC GAA GAGCA                ACGTCTGGACGCGCT  73 324
CHC44_RS16810 3259865 .. 3259878 -  -3.1    -3.794   GGGCAACCCAGTAAA               GCTGCA TCA TGC-GC               GATCTCCTTGTTTTT  53 18
CHC44_RS16805 3259011 .. 3259060 -  -8.7  -2.57132   TTGGGTTTCGACAAG CCTCACCTACCGACCCGTAAC-CC ATT GATATTACGGACCCGTAGATGAAG TGAAGCGAAGCGCAA  63 69
CHC44_RS16780 3253198 .. 3253211 -  -5.2  -2.62788   ATATATCATAACCGA               GGCG AAAAAA CGCC                GTCATTGTAGCAAAA  48 60
CHC44_RS16775 3251886 .. 3251902 -  -2.1  -4.10453   CAAAGCTGGTCAAAA              CAGGGAC GGA GGCCGTG              ACACCCGGTATTTTC  56 78
CHC44_RS16685 3234931 .. 3234953 -  -4.2  -3.28368   AGGCAACGTATAACA          CGTCACGAA TACTTC TTCGTG-CG           CCGCGTTGGGGCCGT  50 5
        mrcB 3232052 .. 3232074 -  -3.5  -3.64599   GCATGATAGGCGAAA          TATCG-TCGC AATG GCAAGCGATA           CGCGGCCCTACGAAA  51 221
CHC44_RS16675 3229758 .. 3229779 - -13.7   -4.1466   AGCCAACTTGTAAAA           CGGGCACGG CAAG CCGTGCCCA            AAAAGAAATTAGAAA 100 34
CHC44_RS16670 NONE
CHC44_RS16665 NONE
CHC44_RS16660 NONE
CHC44_RS16655 3225551 .. 3225563 -  -3.5  -5.61596   ACTTCGATAAAAAAA                TAATA TTT TATTA                TCGAAGTTTTATAAT  95 217
CHC44_RS16650 3224461 .. 3224489 - -16.1  -2.73364   TTTTTACTTTAAGCA        TTATCCTGCGGCA GAC TGCCGCAGGATGA        TATTTCACTTACAGA 100 34
CHC44_RS16645 NONE
CHC44_RS16640 NONE
CHC44_RS16635 NONE
CHC44_RS16630 NONE
CHC44_RS16625 NONE
CHC44_RS16620 3218465 .. 3218489 -  -7.2  -3.82807   AGAAGATATCAATAA         CACCATCGACGC CGC GCGTCG--GGTG         TTTGCGAAACTGTAA  68 148
CHC44_RS16610 NONE
CHC44_RS16605 3215171 .. 3215182 -  -5.8  -3.28712   CTGTCGGCCGGATAA                GACG CTCG CGTC                 GCCATCCGGCACAAC  56 50
CHC44_RS16585 NONE
CHC44_RS16580 3209759 .. 3209790 - -12.4  -2.58418   GTTTCACAGAAAAGT      GTTG-CCCCCTTCCA TGA TGGAAGGGGGACAAA      GGTGATTACTGCATC  81 31
CHC44_RS16575 3208382 .. 3208399 -  -6.3  -3.31263   AGCCGATCTGGACAA             GCTTACC CGTA AGTAAGC              TGTGTGTTGCCGGAT  59 112
CHC44_RS16565 3206438 .. 3206456 -  -8.1  -4.21275   TTAAGCGAGTGAAAA            GCGGGGGC GACA GCCCCC-C             TTTGCATTACGGCGA  76 32
CHC44_RS16550 3202126 .. 3202138 -  -6.3  -3.62096   CCGGATGACGCTAAA                CATCT GAA AGATG                GTGATATCGTCAACA  62 450
        rpsB 3200498 .. 3200518 - -11.1  -4.89729   TATAAAAGTGAAAAA            GGGGGCC ATATACA GGCCCCC            TAACCAAACGTGATA 100 199
         tsf 3199552 .. 3199573 - -13.7  -4.61633   AGAGAGGCGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TCAGGAAAATCAGGA 100 35
CHC44_RS16520 3198585 .. 3198603 -  -5.3  -4.11751   ACGAATCCTTGAAAA             CTAGTCT CAGTC AGACCAG             ACGGTCACACAATAC  63 135
CHC44_RS16515 3197901 .. 3197950 - -16.5  -5.16151   GAAACGGAATAAAAA GCAAAACGCCGCACAGGAGACCT GATA ATGTCTTCTGCGCGGCGCTTTGT ACACCACTCATCCGC 100 84
CHC44_RS16510 3196592 .. 3196603 -  -5.8  -4.95854   GAAAAAAGCCAAAAA                CCTG CGAT CAGG                 TGGCGCAGACTATAT  78 93
CHC44_RS16505 NONE
CHC44_RS16500 NONE
CHC44_RS16495 NONE
CHC44_RS16490 3193361 .. 3193378 -  -2.7  -3.33696   GTTCTTCCTAACTAA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  46 13
        bamA 3190898 .. 3190911 -  -2.4  -3.24747   TCGCTACACTACCAA               TGCA TTCCTT TGCA                GTGAACAATTACCAG  44 34
CHC44_RS16480 NONE
        lpxD 3189220 .. 3189253 - -13.1  -3.57992   AAGGCAATAATAACA     CGGCCTGCCGCAATC GTAT GAATGTGACAGGCCG      GAAAAGAATGGCAAC 100 55
        fabZ 3188723 .. 3188733 -  -4.6  -2.57136   TTATCAATCACGAAT                 CAGG CCT CCCG                 GCTACGAGCACACAT  46 14
CHC44_RS16465 NONE
CHC44_RS16460 NONE
CHC44_RS16455 3186192 .. 3186203 -  -5.8  -3.01243   TCGATACAAGAATCA                GGAC ACAA GTCC                 CAGAGCGCGTTTAAC  52 11
CHC44_RS16450 NONE
CHC44_RS16445 3181667 .. 3181687 - -16.9  -5.86061   CTCGACCAAAAAAAA            GAGGCCGGA TTA TCCGGCCTC            TTGGGGAAAAATGAG 100 49
CHC44_RS16440 3179731 .. 3179757 - -15.2  -3.79849   TAAGCATAGTAACAA         TCCTGCCGATGC AAA GCACCGACAGGA         TTTATCTTATTACAA 100 35
        ldcC NONE
CHC44_RS16430 NONE
CHC44_RS16425 3175368 .. 3175383 - -10.4  -4.18018   GTCGGTCAGGGAAAA              GGCAGC TTAT GCTGCC               GCGAACTTACTGGTG  86 392
CHC44_RS16410 NONE
CHC44_RS16405 NONE
CHC44_RS16400 3173298 .. 3173318 - -16.9  -3.74077   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 31
CHC44_RS16365 NONE
CHC44_RS16360 3166544 .. 3166556 -  -4.9  -3.16068   TCTTCAATTTAAAAG                TTTGA TGC TCAAA                GAATTAAACTTCGTA  52 54
CHC44_RS16355 3164963 .. 3164976 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGTTTCTT  40 36
CHC44_RS16350 3164802 .. 3164817 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
CHC44_RS16345 3164607 .. 3164640 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATCTTTTCGTAAAC  69 51
CHC44_RS16340 NONE
         rrf 3161045 .. 3161055 -  -5.4  -3.16564   CTGGCAGTTTATGAA                 TCAC TTC GTGA                 TTCATCCTTCGGGCC  54 135
CHC44_RS16330 3160865 .. 3160886 - -15.9  -5.30616   GCAGGCAAAGAAAAA           GCCCTGAGC TAAT GCTCAGGGC            TCTTAATAAGTGGCG 100 36
CHC44_RS16325 3159877 .. 3159894 - -11.3  -3.97043   GCGAATATATAAGAA             CAGCTCC CGCA GGAGCTG              TGAAAGAGGGGTAAA  91 60
CHC44_RS16315 3157615 .. 3157628 -  -3.8  -2.73364   CTGTTACGTCAACCA               GTCC TCAACC GGAC                TGGTTCTTCTGTTAT  45 111
CHC44_RS16310 3156752 .. 3156771 - -11.4  -3.07043   GGCAGCACCCGAAGA            GGCCTGCC CCAC GGCAGACC             TGACGCACCTTTATT  79 36
CHC44_RS16305 3155903 .. 3155923 - -11.1  -4.49644   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  93 36
CHC44_RS16290 3152724 .. 3152741 -  -3.3  -4.21989   CATAACTGGAAGAAA             CGCGGCT GGAA AACAGCG              GAAAAGAAACCCGTA  58 211
CHC44_RS16280 NONE
CHC44_RS16275 3151386 .. 3151410 - -14.4  -5.94597   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGGGATACGG          TTTTTTTTACTTCAC 100 73
        clpV NONE
CHC44_RS16235 NONE
CHC44_RS16230 3139795 .. 3139808 -  -3.8  -2.50859   GTAAAATATATATAT               CAGG CATTGC CCTG                CTTCACTGACGGCAG  44 11
CHC44_RS16225 3139516 .. 3139542 -  -2.9  -3.75292   ACTGAGTATCAATAA         CAGCCGGGCAA CTGAC TTCCCAGGCTA         CAGCATATTGTGAAA  52 102
CHC44_RS16220 3139007 .. 3139023 -  -2.2  -3.61517   ATCCTTCTCCAATAA              CTTCAG GAGAA CAGAAG              ACTGTATATTTTTCC  49 162
CHC44_RS16215 3138385 .. 3138409 - -10.7  -5.10656   ATCAAAACAATAAAA          CCAGCCAGACA TAA CATCTGGCCGG          AAAAACAGCCGTTAA 100 37
CHC44_RS16210 NONE
CHC44_RS16205 NONE
CHC44_RS16200 3136600 .. 3136625 - -17.7  -4.71463   AATCAAAACAATAAA         TCCGGCCAGAT ATAA ATCTGGCCGGA          AAAACAATCGTTAAA 100 36
CHC44_RS16195 NONE
CHC44_RS16190 NONE
CHC44_RS16185 NONE
CHC44_RS16180 3132479 .. 3132501 -  -4.9   -2.5474   TGGCAGCGATAACAT           TATCACAGG GTATA CCTGTCATA           CTTCAGGCTGCATGT  48 131
CHC44_RS16170 NONE
        icmF 3128077 .. 3128087 -  -2.4  -3.40403   GCCGGCGCATTACAA                 CGCC CTC GCCG                 GACAACTGAAGTTCT  45 9
CHC44_RS16160 NONE
CHC44_RS16155 NONE
CHC44_RS16150 3126295 .. 3126313 -    -3  -3.28712   GTTCTGCTGCCAGAA             CCAGCC TTGCCCT GGCAGG             TAACGTATGCCCGGT  46 57
CHC44_RS16145 3125415 .. 3125426 -    -3  -3.48342   AATGAATGAGCAGAA                TACA TGTT TGTA                 TCATTTACCTACACT  48 26
CHC44_RS16140 3124962 .. 3124990 -  -4.7  -3.15257   GCTGAAACAGATATA        TTTAAAAATGAGA GCC CCCCATTTTTACA        GTAAACTAGAATACA  50 31
CHC44_RS16130 NONE
CHC44_RS16125 NONE
CHC44_RS16120 NONE
CHC44_RS16115 3115973 .. 3115991 - -10.3  -2.81225   CAGATAACTGAACGA             TCCCGGT GATAA ACCGGGA             TTCCTTCCGCTGTAA  71 164
CHC44_RS16105 3114118 .. 3114128 -  -5.4  -5.33866   TAAATGGATAAAAAA                 CATC CAC GATG                 TTACTAAATTAGCAT  95 181
CHC44_RS16090 3111765 .. 3111778 -  -6.7  -3.43492   GTAGACCGAGTAGAA               GCTGT GCGA ACAGC                TTTATCAGGCTGAAC  62 131
CHC44_RS16085 NONE
CHC44_RS16080 3110561 .. 3110581 -  -2.5  -3.23009   TAAAAATTTGATTAA            TAACCAGCA CAC CGCCAGTCA            TATACTTTATCATTG  45 127
CHC44_RS16075 3110342 .. 3110352 -  -6.8  -3.45324   CACCGTCAGGAAACA                 GTGC CCC GCAC                 TTTATAATGCAACCA  62 5
CHC44_RS16065 NONE
CHC44_RS16060 NONE
CHC44_RS16055 3102545 .. 3102561 -  -2.1  -3.86015   TACCGGGGTGAGAAA              CGCCATC GCG GGTGCCG              GGGCCCGTTACGACT  51 129
CHC44_RS16050 NONE
CHC44_RS16045 3100853 .. 3100875 -  -9.8  -5.00196   GGTTAAATAATAAAA           GCCGGGAATT TAA ATCTCCCGGC           ATATTTAAAAAATAA  93 58
CHC44_RS16030 3098491 .. 3098516 -  -7.1  -3.44517   TAAGACTTAATAATA         CTTAATAG-AAG TTG CTTACTATTAAG         CTTGATATGCCGCTA  65 21
CHC44_RS16025 NONE
CHC44_RS16020 NONE
CHC44_RS16015 NONE
CHC44_RS16010 3093750 .. 3093762 -  -6.3  -4.65722   TGACAGATAAACAAA                CCTTA TAC TAAGG                GCTTATAAAGCCCCG  78 305
CHC44_RS16005 NONE
CHC44_RS16000 3092339 .. 3092353 -  -4.2  -4.20516   CGTTCACCTAACAAA               GTATCC CGT GGAAAC               AAGCAAAACATCGCC  62 145
CHC44_RS15995 3090956 .. 3090973 - -11.3  -3.65542   GGCATCGTCAAAAGA             CGACTGG CTGA CCAGTCG              CATATCTCGATGCCT  87 101
CHC44_RS15990 3090620 .. 3090634 -  -2.8  -5.07053   AAGCATTTCAAAAAA               TCACTA TGC TGGTGA               TGAACATACCGCTTA  76 105
        gmhA 3084724 .. 3084755 - -11.6  -2.87319   GGTAAGGGAGGAAAT      CCCCAGGAACATAG ATAA CTATGTGACTGGGG       TTTCTGAGCGCAACC  78 75
CHC44_RS15960 3083363 .. 3083375 -  -6.2  -3.55444   GGGTTAGGCCCGAAA                CGCC GTCAG GGCG                ATTTTAAAAGTCCGG  57 475
CHC44_RS15950 NONE
CHC44_RS15945 NONE
CHC44_RS15940 3079700 .. 3079722 -   -12  -3.10173   AGAAAGCGCTAAAAT           GCCCGTCC CATTTCT GGACGGGC           TATCAATATGGAATA  81 143
CHC44_RS15930 3077482 .. 3077506 - -17.1  -4.78572   TTGTAACCAATAAAA          CAGCGCCCGGC ATT GCCGGGCGCTC          TGAAAAGCTGCTGAT 100 40
CHC44_RS15925 3076194 .. 3076206 -  -2.7  -3.17586   ATCAATCTATTAACA                CAATC TAT GATTA                ATCCAGTCGGTAATT  45 7
CHC44_RS15920 3075386 .. 3075400 -  -9.2  -2.75267   AAACCCGCAACATGA               CGCCAG TTT CCGGCG               GATTTGCCAATAAAA  60 354
CHC44_RS15910 3073251 .. 3073264 -  -3.1  -3.18264   TTCCTTATCGAGTAA               TCATG TCAT CACGA                TGAACAGCGACCGGT  46 1
        proA 3071905 .. 3071918 -  -5.3  -3.30619   AATCACGGGGTAGAA               GGTTA AAAC TAACC                GGGCGGTGCGTCAAT  54 85
CHC44_RS15900 3071578 .. 3071589 -    -3   -3.1247   AGCTCTGAGACGGAA                TCAT TAAC ATGA                 TGGAATGTAGAATCT  43 223
CHC44_RS15885 3069453 .. 3069479 - -11.2  -3.23598   GAAGTAAGTTATGAA         CTATATATTTAT TCA ATAAATATATAG         ACATTAATTTGACGA  81 142
CHC44_RS15880 3067998 .. 3068008 -  -3.2  -5.04325   TGGAAAGTATAAAAA                 CACA CTT CGTG                 TCTATAATCAGAAAC  74 33
        leuC NONE
        leuD NONE
CHC44_RS15865 NONE
CHC44_RS15860 NONE
CHC44_RS15855 3062999 .. 3063024 -  -6.9  -2.66912   ACGTAAGTCAGAGCA         TCTGGCGCCA CGACAGT TGGCGCC-GA         CTGATCACAGTACGC  55 30
CHC44_RS15845 3061687 .. 3061710 -   -14  -2.62613   TTTGATGGGAAATAT          TCAGGGATAC GATC GTATCCCTGA           GGCAAGCCAGACTCA  86 38
CHC44_RS15810 3054306 .. 3054316 -  -2.6  -3.90328   GACAATGGCGATAAA                 TATT ACA AATA                 TAATCAGTAACGTTC  54 29
CHC44_RS15800 3053670 .. 3053684 -  -7.1  -2.53233   TAATGATAGCAAGAT               GGCAC TCCCT GTGCC               GAAAATAGACAAGAA  57 188
CHC44_RS15795 NONE
CHC44_RS15790 NONE
CHC44_RS15785 3050346 .. 3050356 -  -3.2  -3.20573   GCATTTAGATTAAGA                 GCAC CTA ATGC                 GCTTATTACCAGTCA  46 338
CHC44_RS15780 NONE
CHC44_RS15775 NONE
CHC44_RS15770 3048703 .. 3048722 -    -5  -3.06839   TCATTAAATAATAAC            GCGTTC TTGCTTCT GAACGC             CGTCAAGGAACTATA  51 28
CHC44_RS15765 3048245 .. 3048278 - -18.1  -3.61103   CAAGGTTAGCCCAAA     TAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTA      AACAGGCATATATTG 100 55
CHC44_RS15745 NONE
        cueR NONE
CHC44_RS15735 3038856 .. 3038870 -   -10  -2.81088   AAGCGACGTAACAAG               GTAGCG TTG CGCTAC               TTATTTGTTATCTTT  71 216
CHC44_RS15730 3037463 .. 3037489 -  -7.9  -4.10453   GAAAGGGCGTGAAAA         CGACGGGAGGA AGGCG TGCTCCCGGCG         ACAGTATGCGCCAGG  74 51
CHC44_RS15725 NONE
CHC44_RS15720 3032308 .. 3032336 - -10.2  -3.40299   TTAGCACAGGGAGAA        TGACCGCAACGC TCGCT GCGCGGCGGCCA        TTTTATATGGTCTAT  76 75
CHC44_RS15715 NONE
CHC44_RS15710 NONE
        cydB NONE
CHC44_RS15700 3029308 .. 3029334 - -18.8  -4.83169   ATCTGTCGATAAAAA         CGCGCTTTCGCC AGC GACGAAAGCGCG         TCCGGGGGGGATCAG 100 41
CHC44_RS15695 3028090 .. 3028102 -  -2.6  -2.82884   AAACATCACCCAAAG                CGGC AGAAA ACCG                GGTTAGCGGCGGATA  41 62
        foxA 3025642 .. 3025655 -  -5.9  -3.89346   CGCTTAGCGCAGAAA               CGCCC ACAT GGGCA                AGATTAATGGCCTGG  63 255
CHC44_RS15680 3024661 .. 3024685 - -12.2  -3.72374   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC  93 45
CHC44_RS15670 3021737 .. 3021772 -  -8.2  -3.86897   CGTAGGCGGGATAAA    CGTAG-TGCCATCCGGC ATT GCCTGATGGCGGCTTCG    CCTTATCAGGCCTAC  72 44
CHC44_RS15665 3020506 .. 3020518 -  -3.4  -3.19091   AGAGTGAGTTAGCAA                CGAT CGTCT ATCG                AGACAAATGGACGAT  46 6
CHC44_RS15660 NONE
        prpE 3016624 .. 3016634 -  -8.2  -2.70932   CCCTTCCGTGAAGCA                 GCGG GCA CCGC                 GTTAAAAGGCGACCG  57 472
CHC44_RS15645 3012478 .. 3012501 - -15.4  -3.61715   CATTCCTTGCAATAA          TGCCCGTCAA GTCC TTGACGGGCA           TTTTTCAGTTTAAAT 100 69
CHC44_RS15640 3011367 .. 3011387 -  -6.8  -3.38812   GCCCCTGTAATAATA            CGCTGGCA GCCAT TGGCAGCG            GTGGGGTCTATTCTA  58 474
CHC44_RS15625 NONE
CHC44_RS15620 3007636 .. 3007649 -  -2.3  -4.08767   TTCACTCTCTCAAAA               TCGCT GTTC AGCGG                GAAGCATCGAGAAAC  56 334
CHC44_RS15610 3006846 .. 3006864 -  -5.3  -3.51825   CGAGGTGAATGACAA            GATCCGCG CGAT CGCG-ATC             CAGGCTTATCAGACA  55 285
CHC44_RS15600 NONE
CHC44_RS15595 3003800 .. 3003825 - -14.1  -3.03781   TTAATTTAAACCATA         TCGTAACGGCA GAAG CGCCGTTACGA          TGCACCGCTATTGGC  89 33
CHC44_RS15590 3003166 .. 3003222 - -21.3  -2.82635   ACTGTTATTACCATA GCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC CAGGGCTATTTTATA 100 79
CHC44_RS15585 3002570 .. 3002603 -  -6.8  -3.85704   GGAGGAAGTATGAAA     TTTCGGGTGAGT GTTTTTCAGG ACTCACCCGATA      GCACTACGCCGCTTT  66 29
        adrA 3001231 .. 3001246 -  -6.8  -3.61371   AAATGGTACTCGAAA              CCGGAA AGCA TCCCGG               CGAACTGAAAGATAT  60 182
CHC44_RS15570 2999820 .. 2999833 -  -8.1  -3.14132   GCGTTCCCCCAGGAA               CTGCG CATA CGCAG                GATTTGATATCAGCA  64 176
CHC44_RS15565 NONE
        yaiA 2999000 .. 2999016 -  -2.1  -2.64877   TGGAGATACAATTTA              GGGGTAC TCA GAATCCC              TTCCGAGTGGTTCAT  39 45
CHC44_RS15555 NONE
CHC44_RS15550 2997437 .. 2997464 -  -5.6  -5.00884   ATCCGCGCGAAAAAA        CAG-GATCTGGTC AGC GACGAGATCGCCG        TTCATATTGAAGCGG  82 314
CHC44_RS15540 2995528 .. 2995538 -  -8.2  -4.07687   ACTGCTGCTGCAAAA                 CGCC AAA GGCG                 GCGAACTGCTGGGCG  77 257
        phoB 2989119 .. 2989160 - -15.3  -3.85389   CCTCAAGAATGGAAA GCCTTCTCCGCCAG-AAACC TGT GTTCTACTGGCGGAAAAGGC ATTAAAAGCGGGTCG 100 27
        phoR 2987749 .. 2987770 - -13.1  -4.90525   TAACTGCAAAGAAAA           TAAGCCAGC ATCC GCTGGCTTA            TGGAAAGTTATACTT 100 52
CHC44_RS15510 2986025 .. 2986047 - -16.3  -5.64304   CAACACAATAAAAAA           CCACGGGGC GTTAA GCCCCGTGG           TGTACACATATGTCA 100 47
CHC44_RS15505 2984566 .. 2984618 -  -9.2  -2.66216   CTCCAGGAGGAGAAG CGGCTCCGC-TTATCCGGTCTACCG TTGC CTGCAGACCGGATAAGGCAGAGAAA AACGACTACGCCTGC  66 31
CHC44_RS15500 2982592 .. 2982609 - -12.7  -4.42653   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTAAG 100 61
        queA NONE
CHC44_RS15480 2979866 .. 2979892 -  -6.6  -2.72344   TCCGACGTTTAACGA         CTCGCTACGGAA TGA TTCCATAGCTAA         TAAATTCCCGAAGGC  55 22
CHC44_RS15475 2978706 .. 2978722 -  -5.1  -3.54779   ATTAAAATTAATCAA              CGTTCAA AGG TGGAACG              GGTCGCCCCTGACGT  56 1
CHC44_RS15470 NONE
        secD NONE
CHC44_RS15460 2975442 .. 2975461 -   -10  -6.02914   GGTACATAAAAAAAA            TCCCGATC GTAT GACCGGGA             TTCAGATAACACTTA 100 50
CHC44_RS15455 NONE
CHC44_RS15450 NONE
CHC44_RS15445 NONE
CHC44_RS15440 2973125 .. 2973146 - -15.9  -5.07107   TAAACCTGCAAAAAA           GGCCAGAGG TCGT CCTCTGGCC            CGTTTCGGGCGCATG 100 375
CHC44_RS15420 NONE
CHC44_RS15415 NONE
CHC44_RS15410 NONE
CHC44_RS15405 2968651 .. 2968664 -  -3.7  -5.61277   CAGAAAAAAAGAAAA               GGCCG GAGA CGGCG                GGTATCATCCATCGC  88 64
CHC44_RS15400 NONE
CHC44_RS15395 2966783 .. 2966804 -  -5.3  -4.57569   TGACGTGGGCAAAAA           TTTATACGCT GAA AGCG-ATAAA           AATGATGCGCAAATA  73 369
CHC44_RS15370 2961307 .. 2961319 -  -6.2  -2.94099   GCCGGGTAGGACATA                GCCG CCACC CGGC                AAAGGAATTACGGAC  55 33
        phnW NONE
CHC44_RS15335 2954443 .. 2954490 - -15.8  -3.53444   GGATGGCGGCGTAAA CACCTTATCCGGCCTACAAAACG GTA CAATCTGTAGGCCGGATAA-GCG ACAGCGCCATCCGGC 100 48
CHC44_RS15320 2952181 .. 2952228 -  -5.5  -3.90112   CTGTTGGCAATGAAA GGCGTAAGCGAAGCGCTGATC GTGGCG GAAGAGCATTCCGCTTACGTC AAAATCGACAGCAAA  61 132
CHC44_RS15305 NONE
CHC44_RS15300 2947311 .. 2947331 - -11.1  -5.08824   TTGCTATTGAAAAAA            CCGCCGTGT CAC AAACGGCGG            TTTTTTTATCCATTT 100 65
CHC44_RS15260 NONE
CHC44_RS15255 2939251 .. 2939264 -  -9.5  -5.23292   TCAGACAAAACAAAA               CGGCC CGCA GGCCG                TTTTCACATAATTCT 100 86
CHC44_RS15245 2937623 .. 2937644 - -11.6  -5.93809   GCGTGACAAAAAAAA           CCCGTCAC TGAAAG GTGACGGG            TTTTTGTGCAAATTT 100 61
        clpP NONE
        clpX 2935236 .. 2935254 -   -11   -4.3623   ACAGGAAAAACGAAA             GGGGAGAT AAA ATCCCCCC             TTTTTTGGCTAACTG  90 58
CHC44_RS15230 2932685 .. 2932714 -  -8.6  -5.72616   AGCTATACAAAAAAA       GGCTGGCAAGTCC GAAAT AG-CCTGCCAGCC       CTGTTTTTATTAGCG 100 58
CHC44_RS15225 2932211 .. 2932230 -   -10  -5.45652   ATCGCCAATAAAAAA            GGCACATC AGTT GATGCGCC             CTTGTACTTTGTCAC 100 61
CHC44_RS15220 2930041 .. 2930056 - -11.8  -4.39571   CTCAGAAATGGAAAA              GGCCGC GAAA GCGGCC               TTTGTGGGATACAAC  95 73
CHC44_RS15215 2929522 .. 2929544 - -10.7   -2.9796   TAAGCGACAAGTACA           GAGGTCATA ACTGG TATGACCTC           TACAGTCTGGCAAAT  75 61
CHC44_RS15210 2928697 .. 2928723 -    -5  -3.54741   GATGAGTTCGTCAAA         GCGCTGAATCAC GCG GTGAATCTGGGC         ATGGCGAAAGATATC  55 380
CHC44_RS15195 2925557 .. 2925575 - -10.3   -6.0458   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC 100 43
CHC44_RS15185 NONE
CHC44_RS15180 NONE
CHC44_RS15175 2920279 .. 2920295 -  -6.5  -5.30616   GCAGGGAAAGAAAAA              CGCACCA CGA CGGTGCA              TGATGGGCGAGGTTT  87 60
CHC44_RS15170 NONE
CHC44_RS15165 2918366 .. 2918384 -  -4.4  -5.33848   ATCACAATTAAAAAA             CATGCCGC TAT GCGGCGTT             AATGGCCTGATGACG  84 102
CHC44_RS15155 2916685 .. 2916705 - -16.9  -3.14132   CGCTGGGTGTATTAA            CCCTCTCCG TAA CGGAGAGGG            TTGGCGCAGGATTAA 100 37
         ffs 2915697 .. 2915719 -  -5.5  -3.33696   TCGCGCTTGAATTAA          CGGAAC-GCG AGTT CGCCGATCCG           AAAACCAGCGCGCCC  53 420
CHC44_RS15135 NONE
CHC44_RS15130 2913835 .. 2913858 - -10.3   -5.4505   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACT 100 50
CHC44_RS15095 2906208 .. 2906228 -  -4.8  -4.61868   TAGCGACACAGAAAA           TGTCCAGGA GTTT TCCTGGA-A            TATTATCAGGGGGAG  73 31
CHC44_RS15090 2902568 .. 2902595 -  -9.8  -4.57341   AAGGGCCTGCAAAAA        GGCCTTGAGCAA GGGT TAGCACAAGGCC         GTGAGGCCGAAGCGC  91 183
CHC44_RS15070 NONE
CHC44_RS15065 NONE
CHC44_RS15060 2899787 .. 2899811 - -16.5  -3.09671   AGGGTAATGCTAACA          CAACCTCGCCG ATA CAGCGAGGTTG          TCTCTCTGGCTAAAA 100 62
CHC44_RS15055 2897787 .. 2897805 -  -9.6  -3.30124   CTTGATGGTTCACAA             TCGCAAGC CAG GCTTACGA             TCAAATGGGGCGGAT  74 26
CHC44_RS15050 2897438 .. 2897451 -  -2.3  -2.64099   GGTTTGCATCAGAAT               GGCAT CTTA AAGCC                TGGCGGCAGTTGCAT  39 5
CHC44_RS15045 2896734 .. 2896750 -  -3.7  -3.67558   GATAGACCTCAACAA              TGCCATT TTT AATGGTA              AAAATACGTTGAGGG  53 101
CHC44_RS15040 2894568 .. 2894596 -  -5.2  -5.31877   AGGTATTATAAAAAA       TGCCGGAT-GGCG CTGG CGCTTATCCGGCC        TACAAACAGTACTCG  82 270
CHC44_RS15030 2893679 .. 2893710 -  -4.3  -3.30441   CAGCAGGCCGGATAA      GGCGTTCAG-GCCG CCATC CGGCACCGATTGCC      TGATGGCGCTACGCT  52 96
CHC44_RS15025 2892581 .. 2892605 -  -4.2  -3.21416   TATGGCGAGGATGAA          GACGCCGC GTTAACGGT ACGGCGCC          GTGAGTTTCAGCATC  48 10
CHC44_RS15015 2889805 .. 2889829 -  -7.8  -3.14211   ACCCGCGTGGATGAA          CTGCGCGAAC GCGGG ATTCGCGCCG          TGCTGGGCAACGCCG  57 361
        ushA 2884832 .. 2884848 -  -5.8  -4.56597   TCTGGGCGCGAAAAA              GGTCGA TATGG CCGACC              CGATGGTGGCGCAAC  75 357
CHC44_RS14975 2879290 .. 2879306 -  -5.7  -3.65812   CGTGCGGGAACAGAA              GCCGGCC GAC AGCCGCC              TTAACCAACGCGGAC  60 214
CHC44_RS14960 2877307 .. 2877325 -    -3  -2.74523   GTATTGGTAATATTA             TGCTCGTT CAT AACGCGCC             TCCTGCATCTCTCCG  41 4
CHC44_RS14955 2876511 .. 2876522 -  -7.2  -3.30124   CCTCAGGCCGGATAA                GGCG CTTG CGCC                 ATCATCCGGCAACTA  63 41
CHC44_RS14935 NONE
CHC44_RS14930 2870888 .. 2870911 - -12.4  -3.20639   CGACTAAATAAAGTA          CGCGCCGTTT TAAA AACCGGCGCG           AAATTATTCACATCA  86 45
CHC44_RS14925 2869564 .. 2869598 -  -7.9  -3.84451   TGGCGTAAAGGGAAA    TGCCGGATA-AGACGT CTTA ACGCCAGCATCCGGCA     GAGGAAAACGCTTTA  71 38
CHC44_RS14920 NONE
        sfbB NONE
CHC44_RS14910 2866718 .. 2866741 -   -11  -5.27923   CAACTGGAGAAAAAA          GCCGCGAATA TCGT TTTTCGCGGC           CCATGGCAAGACGTT 100 103
CHC44_RS14895 2863942 .. 2863956 -  -7.2  -4.12254   TATGAGCATAAACAA               TGAACA ATA TGTTCA               TCTTATGCAAGAAGG  72 50
CHC44_RS14890 2863058 .. 2863077 - -13.6  -3.67443   AAAATTTTAAAAAAG            TCCCGCTC CAGC GAGCGGGA             TGCGGCTCAGGCTAC 100 32
         gcl NONE
CHC44_RS14880 NONE
CHC44_RS14875 2859420 .. 2859445 - -11.9  -3.01712   TGTTCCTTGTGAACA         GGTATCGCTGC AGCC GCAGCGATACA          CATAATTAGGACAAT  81 31
CHC44_RS14870 2858148 .. 2858159 -  -4.4  -3.28001   TATTTTTAAACTGAA                GCAA TACG TTGC                 GTTGCTTTCTTTTTA  52 4
CHC44_RS14865 NONE
CHC44_RS14860 2855112 .. 2855132 - -16.9  -3.83378   CCTTAAAATAGAGAA            TGCCCGTCG TGA CGACGGGCA            TTAAATCACACCGGA 100 41
CHC44_RS14855 NONE
CHC44_RS14850 2852408 .. 2852418 -  -2.4   -3.8062   TAACCTCGACAACAA                 CTGG GTG CCGG                 TGAAAAAAGGCGACT  52 227
CHC44_RS14830 2847446 .. 2847460 -    -2   -3.6682   CGCCACTGATGTAAA               CATGGG AAC CCCTTA               TTGCAAACGTTCTAA  49 23
CHC44_RS14825 NONE
CHC44_RS14820 NONE
CHC44_RS14815 2844432 .. 2844469 -  -6.3  -4.46233   GTAAGCTTAAATAAA  CGGCG-TGGGCGGCG-CA TTCTC TGTCGCCGCCCGTCGC-G  ATCACAGACAGATGC  76 27
        cysS 2839923 .. 2839952 - -15.1  -6.04324   CGAAAAAATAAAAAA       CAGGCCGTTCTAT GCAA ATAGAGCGGCCTG        TAAAAGCGCTTACTT 100 35
CHC44_RS14755 NONE
        fimA NONE
        fimI NONE
CHC44_RS14740 NONE
CHC44_RS14735 NONE
CHC44_RS14730 NONE
CHC44_RS14725 2830104 .. 2830114 -  -5.4  -4.67607   TGTCTAACAAAGAAA                 TTGC CGA GCAA                 CTTTTATTGAGTAAC  73 185
CHC44_RS14700 2826944 .. 2826959 -    -4  -3.14878   CTTGTGAAGTGAAGA              CTTCGT GTAG ACGAAA               CGCGAGAATTATACG  48 57
CHC44_RS14695 2826561 .. 2826584 -  -5.2   -3.9279   ACCGAAGGCCAGAAA          GCGCAGCC GGGTATAT GGCTGGGC           GAAAATAAAAATAGA  61 293
CHC44_RS14670 NONE
CHC44_RS14665 NONE
CHC44_RS14660 2822131 .. 2822145 -  -2.1  -3.19482   GCAGATCAGCAAAAG              CAG-GC GTGC GCACTG               GGAAAACCTGAACAC  44 333
CHC44_RS14625 2816721 .. 2816741 -  -7.5  -3.96148   CGCTCGGACGATAAA            CGTAGGCTG AAC CCGCCTACA            GTTTGACGCCGCAGG  70 54
CHC44_RS14615 2814292 .. 2814308 -  -9.4  -5.83822   GACAGGCAAAAAAAA              GCCCTG ATTAA CAGGGC              TACGTTATTTATGTT 100 41
CHC44_RS14610 NONE
CHC44_RS14605 2813283 .. 2813312 - -14.3  -3.13867   TCATTCATCAACACA       TTGTCGGATGGCG CAAG CGCCACCCGACGA        ATCGCGGCATAAAGA  95 71
CHC44_RS14595 2810331 .. 2810362 -   -16  -2.56596   TGCGGCATTAATGGA      TTGCCCGATCGCAT GAAC ATGGGATCGGGCAA       AAAAGTTAATGAGCC 100 31
CHC44_RS14585 NONE
CHC44_RS14580 2806804 .. 2806820 -  -2.2  -4.25104   GGCGTGTCATCAAAA              TCGGGC GCTAA ACCCAA              CGTTATAACGGGTTT  57 3
CHC44_RS14575 2803453 .. 2803475 -    -7   -3.1706   AATGCAGTGGATCAA           CTCCGCCA GCATACA TAGCGGAG           AGTATTTCCACGGAC  56 452
        ramA 2796461 .. 2796496 -  -2.6  -4.56597   GCGCTGGCGCAAAAA    CTGGTCGGGATC TTTCATCTTATG GATCTCAACCAG     CTTTATACTTTGTTG  65 133
CHC44_RS14500 2790721 .. 2790739 -    -3  -3.13475   GAACTCCATACTCAA             CTCCTGTC ATG GACATGTG             CCCGGTTAAAGCGTG  45 31
CHC44_RS14495 NONE
        entF 2786549 .. 2786575 -   -14  -5.45652   AGTTGCAATAAAAAA         CCCATAATAATT AGT AATTATTATGGG         TTTCAGGATTTAATT 100 65
CHC44_RS14485 2785197 .. 2785216 - -12.2  -4.05389   CACACAGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 38
CHC44_RS14465 2780718 .. 2780731 -  -2.3  -3.54424   CCCGAGGGCTGCAAA               CCAGC AAAA GCCAG                GGTAAGCGCCACGAT  47 328
CHC44_RS14455 NONE
        entE NONE
CHC44_RS14445 NONE
CHC44_RS14440 NONE
CHC44_RS14435 NONE
CHC44_RS14430 2772541 .. 2772565 - -12.9  -2.78798   ACCTGTCATCCAAAC          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGAAAAAAG  85 42
CHC44_RS14425 2772010 .. 2772022 -  -3.4  -4.81249   CCGCAAACGGAAAAA                TTCC TGCAC GGAA                CGAAAGTGGCTTATG  70 324
CHC44_RS14415 2769848 .. 2769882 - -10.1  -3.24232   TGCGCCTGAAACAGA     TCAACGGCCTGCA GGAGCTTTT TGCAGACCGTCGA     TTCTCCAGAGCGTGG  74 53
CHC44_RS14385 2764795 .. 2764812 - -12.7  -4.05788   GGTGCTGAAATGAAA             TGGGCGC GGGT GCGCCCA              TGACTGAAACAATTT 100 162
CHC44_RS14380 2762982 .. 2763002 - -14.1  -5.63517   CGTTGAAATAAAAAA            CCGTCTGTT ATT AACAGACGG            TTTCAGAGTATTGAT 100 165
CHC44_RS14375 NONE
CHC44_RS14370 2759970 .. 2759982 -  -5.5    -3.445   CTATTCACTAAAAAC                GCACG TCT CATGC                TACGGATTCCCCTTT  57 20
CHC44_RS14365 NONE
CHC44_RS14360 2758609 .. 2758641 - -13.4  -2.83903   GTGGCTAAAAACTGA      CACGCCCTGCCAGG TCGCG CCTGGCAGGGCTTT      TTATTGCATCATCGT  86 40
CHC44_RS14350 2756649 .. 2756668 - -12.2  -2.87881   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  80 56
CHC44_RS14340 2755869 .. 2755887 -  -5.2  -3.73224   TCAGTTTTCATTAAA             GGCGTCGA TGA TTAACGCC             CCGCTCTCCTCTGCC  58 212
CHC44_RS14295 NONE
        dpiB NONE
        dpiA NONE
        pagp 2743071 .. 2743087 -  -7.3  -4.02302   TTTACATGAAAAATA              GACACAA ATG CTGTGTC              GGATACCAGTACAAC  72 171
CHC44_RS14265 2742791 .. 2742807 - -10.8  -6.10489   AAGCGCAAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT 100 54
CHC44_RS14255 2741408 .. 2741427 -  -5.6  -4.72272   CTTCTTCACTAAAAA            CAGGCTGCG TAA CGC-GCCGG            ATTAACCTGAGAATA  74 113
CHC44_RS14250 2741134 .. 2741148 -  -9.2  -5.81412   TTCAGGCAAAAAAAA               CCGGCA ACT CGCCGG               TTTTTTTACTCTGCG 100 60
CHC44_RS14190 2728922 .. 2728935 -  -8.1  -3.04461   GACGCAGGCGCAACA               CCAGC AGTG GCTGG                AACAGCATCTGACCC  60 191
CHC44_RS14165 NONE
CHC44_RS14160 2722469 .. 2722490 - -10.1  -3.54653   ATTCCCAGGAGATAA           CCGGACAGC TTGT GCTGCCCGA            TTTGGTATCAGAACG  77 33
CHC44_RS14155 2721454 .. 2721469 - -11.8  -3.14132   CTGTTGGTTTATGAA              CGGGCG AGAC CGCCCG               TCGTGATTTATTTTC  83 51
CHC44_RS14150 NONE
CHC44_RS14145 2718897 .. 2718920 - -13.2  -3.04263   ACTGCACGCTTAACA          TG-GCGGACGG CAA CCGTCCGCTCA          CGATAATGAACCTTA  86 38
CHC44_RS14135 NONE
CHC44_RS14130 NONE
CHC44_RS14125 2714938 .. 2714955 -  -3.4  -2.97436   CAGATATTCATAAAT             CGCTCA CTCCTT TAAGCG              TTTCCGGGCATGTCG  44 0
CHC44_RS14120 2713431 .. 2713445 - -12.8  -3.62275   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTGCCCCTGT  95 41
CHC44_RS14050 2698572 .. 2698593 -  -3.7  -3.06686   ATGCTACATAAAGTA           GTACGTTGC CAAT ACAACGTAT            GCACAATTGAAATGG  45 175
CHC44_RS13975 2688682 .. 2688705 -   -11  -5.75342   TTGCGGTAAAAAAAA          GCGGC-GAAGG TTC CCCTCTGCCGC          TTATGTTTTCTGTGA 100 84
CHC44_RS13970 2686827 .. 2686843 - -11.5  -5.38951   AATGCAGAGAAAAAA              CGCCGCA GAA CGCGGCG              TTGACAAGGTATTTT 100 68
CHC44_RS24165 NONE
        chiP 2684995 .. 2685021 -  -8.6  -3.01712   GGTCGTTCCTCAACA         GCGCGGCAGACC GGC AGCCTGCCGCAT         CTGACATCAGAAAAT  66 32
CHC44_RS13960 2684603 .. 2684629 - -13.7  -5.07107   TAAAGCCTGAAAAAA         CCACGGGCGGA AAACA TTCGCCCGTGG         GTGGCAAGGCAGGGT 100 42
CHC44_RS13915 NONE
CHC44_RS13910 2674534 .. 2674549 - -10.4  -5.47159   CGTTAATATAAAAAA              GGAGCC TTAC GGCTCC               TTTTTCTTCCATATC 100 46
CHC44_RS13860 2661260 .. 2661281 -  -9.4  -5.60993   TGGCGCATAAAAAAA           CCGCCAGC GTGGCA GCTGACGG            TTTTTCAGGCTGGTC 100 45
CHC44_RS13855 2659740 .. 2659763 - -13.9  -2.67747   TCCTGATAGCAGAAT          GCCCGGTAG TTTGCG CTACCGGGC           CTGTATCACACCCCT  86 31
CHC44_RS13840 NONE
CHC44_RS13835 NONE
CHC44_RS13830 NONE
CHC44_RS13825 NONE
CHC44_RS13820 2653876 .. 2653892 -  -2.9  -3.54543   ACCTATGCGCCCAAA              CAACCTT TGT AGGGCTG              ATAAGCGTCGCGCCA  48 75
CHC44_RS13805 2651057 .. 2651067 -  -5.4   -4.9934   ACAACACCAGAAAAA                 GCAT ATA ATGC                 GTAAAAGTTATGGGG  78 33
CHC44_RS13795 2650285 .. 2650298 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  43 4
CHC44_RS13790 NONE
CHC44_RS13785 NONE
        sdhB 2647091 .. 2647111 - -14.1  -2.55351   GCCGTGGATACTAAC            CACGCATAC GCT GTATGCGTG            CCGGGGTTCACTTGT  87 351
CHC44_RS13775 NONE
CHC44_RS13770 2642824 .. 2642837 -  -6.7  -2.81464   CCATCAGGCATTACA               CCATC GCCG GATGG                CGGCGTGAACGCCTT  55 77
CHC44_RS13765 NONE
CHC44_RS13760 2640644 .. 2640662 - -11.7  -5.33866   TAAAGCCATAAAAAA             GGCCACC GTAAA GGTGGCC             AACCATGTCGAAAAC 100 75
CHC44_RS13755 NONE
        cydB NONE
CHC44_RS13745 NONE
CHC44_RS13740 NONE
CHC44_RS13735 2635814 .. 2635839 -  -9.1  -4.82154   AAGGGAGAGTAAAAA         TATATGGGCTT ATGC AAGCCCCTATA          TTTTTAAGGAGGTTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
CHC44_RS13715 NONE
        tolB NONE
         pal 2630871 .. 2630882 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
CHC44_RS13700 2630041 .. 2630088 - -14.3  -3.15579   TCAACTGCTTAGGAA TCGCACGACGCGACCAGAAAA AAGGCG TTTTCTGGTCGCATGGTACGC ATTACATCGCGTTAA  95 27
CHC44_RS13695 NONE
CHC44_RS13690 2629637 .. 2629649 -  -4.8  -2.76189   CAACTGAGCTAACGA                CCCA AGTGG TGGG                TGATGACGGGATCGA  49 19
CHC44_RS13685 2629416 .. 2629430 -  -2.1  -3.10409   TACCAACTGAGCTAA              CGACCC ATAC GGGT-G               CTGCCTGAAAGATTT  42 159
CHC44_RS13680 2629209 .. 2629223 -  -3.5  -2.76189   CAACTGAGCTAACGA               CCCCT TGGAT AAGGG               TTACTGCTTCAATCA  43 148
CHC44_RS13675 2629111 .. 2629125 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
CHC44_RS13670 2628857 .. 2628871 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 135
CHC44_RS13665 2628701 .. 2628715 -  -9.2  -4.84527   TGCAGATAGCAAAAA               GGCGCC GCC AGCGCC               CTCTTTTACACTGGT  90 37
CHC44_RS13660 NONE
CHC44_RS13655 2626586 .. 2626642 -  -3.9  -3.22774   CAGATGGAGTATCAA GTG-TG-TCACGGCCCGGACTGTCATCTG AAT CAGACGCCA-TCCGGGC-ATGTTCATCAC CATTAACGGGAAAGC  48 28
CHC44_RS13640 2623770 .. 2623797 - -15.7  -3.06315   TTAATATTGGTAATA        TCGGTCCGGTA GACTGT TACCGGACCGA         TATGTTTTCTATCCT  93 69
CHC44_RS13625 2621161 .. 2621172 -  -5.8  -3.63627   CCTGGATACCTCAAA                GCCT TGCC AGGC                 AAGATATAGAGGCTA  60 175
CHC44_RS13615 2618820 .. 2618830 -    -4  -3.77832   TCTCAAATTTAATAA                 TCTA AAA TAGA                 AAAGTAATATCAGGC  55 42
CHC44_RS13610 NONE
        oadA NONE
CHC44_RS13600 2615362 .. 2615420 -  -9.9  -2.62396   CATTCCCGGAGACGA TGCTGCGCATCTGTCCGGGCTA-CAGATC CATGC AATCCGGTAGCCCGGACAG--GCGCAAC- GCGTCGCCTCCGGGA  68 52
CHC44_RS13595 2614450 .. 2614467 - -11.3  -5.76633   CCATAGACAAAAAAA             GCGTGGA GCCA TCCACGC              TTGAGGCTGCTGACA 100 188
CHC44_RS13590 2613164 .. 2613194 -  -4.7  -2.52834   GAGCGGAGCATTAAC      CCGCG-CATCAGAG ACTC CCCCGATGTCGCAA       TACAATGCTTAAAAA  46 2
CHC44_RS13585 2612330 .. 2612375 - -18.6  -3.29511   CGGATGGCGGTATAA CTGC-CTTATCCGGCCTAC GAGCAATGG GTAGGCCGGATAAGCGCAG CGCCATCAGGCAATA 100 45
CHC44_RS13530 2603131 .. 2603148 -  -9.8   -5.1356   CTTGAGTAACAAAAA             CGCCCG ACTGAG CGGGCG              TTTGGGGAAATCAGC  93 36
CHC44_RS13525 NONE
        modB NONE
        modC 2600250 .. 2600264 -  -6.4  -3.95456   AAAGGCAACAGTAAA               GGCAAG CGC CTTACC               CAGTGGATAGAAGCG  65 230
CHC44_RS13505 2598374 .. 2598402 - -17.4  -3.87815   GTTCAGGCTTATAAA        CGGGCCGCCGCA GCAGA TGTGGCGGCCCG        TGGTTTTACTGCAAG 100 114
CHC44_RS13495 NONE
CHC44_RS13490 2594669 .. 2594683 -  -2.1   -3.3382   CGGATGACAGATTAA              CGC-CA CCAG TGCGCG               ATTTGCCAGCCAAGC  45 7
CHC44_RS13485 2593798 .. 2593815 -  -7.1  -3.08176   TAAGAATCAGACATA             TACTTGT CTAT ACAAGTA              AGCACAAGAATAGAA  60 105
        hutU NONE
        hutH 2590432 .. 2590463 -  -8.6  -3.53444   GGATGGCGGCGTAAA      CGTCTTACCCTGCC AACG GGTTGGGTAAGCCG       AATACGCGCCGCGCC  71 53
CHC44_RS13460 NONE
        bioF NONE
CHC44_RS13450 NONE
CHC44_RS13445 2584841 .. 2584860 - -12.2  -4.13561   TCTGGCGAAAAAACA            GCAGGATC GTCT GATCCTGC             AAGAAGGCAGTTTTT  93 49
CHC44_RS13440 NONE
CHC44_RS13435 2582170 .. 2582194 - -10.7  -4.17089   CTGAAATTCTCAAAA          GCGAGCCATGG TAA CGATGACTCGC          TGGCGATCGACACAT  88 43
        slrP 2579397 .. 2579424 - -13.6  -3.40403   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCTCTTCTG 100 56
CHC44_RS13420 2577055 .. 2577069 -  -2.8  -2.76492   TGACTCATCTGAAAT               CTCCTT ATT AAGGAT               TAACCGCCAATGTAA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
CHC44_RS13400 2575328 .. 2575347 -    -5  -3.53091   ACTCCTGTGTGGAAA            TGATACCC TAAA GCGTATCA             CATTCTGCTACCAAC  56 33
CHC44_RS13395 2574565 .. 2574583 - -10.3  -5.42862   ATAGTCCTAAAAAAA             TCCTGGC GCAGG GCCAGGA             TTTTAAGAGATCGCT 100 45
CHC44_RS13385 2573740 .. 2573763 -  -3.8   -5.4756   AACCTGAATAAAAAA          CCTGCAGCGCC TAC GGC-CTGAAAG          ATAATAGTATTTCCA  88 12
CHC44_RS13380 NONE
CHC44_RS13375 2572194 .. 2572228 -    -5  -3.64703   CTGCCGTCATGGAAA     TTCGCACTGGCG CAGATGGCAAT CTCCAGCGCGAA     CTGGATGGCGATGGG  58 347
CHC44_RS13355 2568644 .. 2568654 -  -2.4  -3.53091   ATTTTCGTTGGTAAA                 GCGG TGC CGGC                 GCTGATTGTCGCGAC  47 417
CHC44_RS13325 2561667 .. 2561711 -   -10   -2.7185   ATGACGGTGCAAGCA CCTTACCCGGCCTACGTATT TGCAT AGTCCGTAGGCCCGGTAAGC GTCGCGCTACCGGGC  71 58
CHC44_RS13320 2559390 .. 2559403 -  -9.5  -3.24747   TGCTCACAGCATTAA               CGCCG TCGG CGGCG                TGCAGGTTTTGCTTT  72 8
CHC44_RS13315 2558075 .. 2558110 -    -6  -4.41844   AAAACCTGCATAAAA    TCGGCGTAGTGTCTGCC GAT GGC-GCCACCACGCTGG    ATGGCCTGGAAGCTA  73 297
CHC44_RS13300 2555774 .. 2555787 -  -2.3  -4.11692   TATTCAGTTTGAAAA               CGGGA TGAA TACCG                GCGACTTAGTCACCA  56 522
CHC44_RS24155 2550778 .. 2550802 -  -3.5  -3.76785   AGAGCGATAAAAAAG          CGACGGTTGAG TTG CTTAATCGTCA          GGTGATCCAGTTCAT  53 372
        ompX 2548597 .. 2548614 -  -9.1  -5.81412   TTCAGGCAAAAAAAA             TCCGCCC CGAA AGGCGGA              TTTTTCATTTTCACC 100 48
CHC44_RS13250 NONE
CHC44_RS13245 2544586 .. 2544609 -  -7.4  -4.15106   GATGAACCGGTAAAA          GCCACCA-CCG AGC CGGACGGTAGC          CGTTACATTGAGGTG  74 249
CHC44_RS13235 2542036 .. 2542047 -  -7.2  -3.81488   GCCCGGTAAACACAA                CGCC ACCG GGCG                 TCAGTGTTTAGCTTT  68 33
CHC44_RS13225 2539577 .. 2539590 -  -8.1  -3.04144   GCGCTACGTTTAACA               GGCCT GCGC AGGCC                TGTTAATCAGAAGGG  62 32
CHC44_RS13200 NONE
CHC44_RS13195 2530899 .. 2530910 -  -7.2  -3.36492   GTCTGAATGTTATAA                GCGC GAGA GCGC                 ATTATCCTGCAGCGG  63 8
CHC44_RS13190 NONE
CHC44_RS13185 NONE
CHC44_RS13180 2526983 .. 2526994 -  -5.8  -3.54424   CTCGACTTCCTGAAA                GAGG CGCG CCTC                 GATCGTGTAGGCTGC  57 458
        bssR 2525006 .. 2525036 -  -7.6  -2.87683   ACAGGCTGGCATATA       GGAGAGCATGAC AACCCGG GTCATTCCCTCC       GTGATTTTTTAGTAA  59 386
CHC44_RS13160 NONE
CHC44_RS13155 NONE
CHC44_RS13150 2522264 .. 2522274 -    -4  -3.31461   GAGCCAGTGCCATAA                 TTCT GGC AGAA                 CGCCCCCCCTCTTTA  50 189
CHC44_RS13140 NONE
CHC44_RS13135 2520618 .. 2520630 -  -4.9  -4.59212   AACCAATGAAATAAA                TATCA TAG TGATA                AAACAGATGAAATGG  73 160
CHC44_RS13130 2518659 .. 2518682 -  -6.1  -4.41047   ATGGTTGAAGCAAAA          GTG-GGCATT GGTAT AATGCCTCAC          TCTGCTGCATCCCGT  73 190
CHC44_RS13110 2516230 .. 2516241 -  -7.2  -3.07935   ATCCCAGTCACCTAA                CGCG TAGC CGCG                 GCCTCAAGTAAAGGA  60 10
CHC44_RS13100 2513932 .. 2513943 -    -3  -4.07885   GAGCTGCCGGTAAAA                CATT GGGC AATG                 ACAATGGCACAGAGC  58 239
CHC44_RS13085 2510628 .. 2510638 -  -8.2  -4.10161   GACGATGCGTTAAAA                 GCCG TTG CGGC                 AATGTATTATCATCG  77 515
CHC44_RS13070 2507963 .. 2508011 -  -5.2  -3.14132   TGTGCTGCGCATGAA CCGGGCGCTGCTGTTCG-GCGCC ATGATG GGCGCGCGTAC--CTGCGCCCCG GCGATGGAAATCATT  50 277
CHC44_RS13060 2505435 .. 2505447 -  -5.5  -3.56704   GGGTTATCAAAGGAA                CAGGC GTA ACCTG                CTTTTCATCTGCCGT  57 391
CHC44_RS13050 NONE
CHC44_RS13045 2504322 .. 2504342 -  -7.5  -4.19276   TGAAAACCCTGAAAA            GCCCGCGTA TCA TACACTGGC            CCGCAGGTTTTAGCG  74 35
CHC44_RS13040 NONE
CHC44_RS13035 2502779 .. 2502801 -  -8.4  -3.48617   AAAAAAGTGTAAACA           GCAGCCGC GCTGGCA GCGACTGC           CTGATTATCGGAAGG  71 43
CHC44_RS13030 NONE
        potG NONE
CHC44_RS13020 NONE
CHC44_RS13015 2498281 .. 2498299 - -11.7  -3.08032   CTTCCCTGAAAATGA             TGCCGCG ACCCG CGCGGCA             ACGCATTGCCATAGT  81 58
CHC44_RS13010 NONE
CHC44_RS13005 2496512 .. 2496554 - -15.2  -3.19202   AAATAGAGCAATATA TAACCATGATCGATCG GAGTTTTTTAT CGATCGATCATGGTTA TTATTATTTATGGAT 100 86
CHC44_RS13000 NONE
CHC44_RS12995 NONE
CHC44_RS12990 2493050 .. 2493067 -  -9.1  -3.59262   TTCTACAGTTTCAAA             CGCCTGC ATCA ACAGGCG              ATTCGGACTAATACT  75 88
CHC44_RS12950 2487885 .. 2487900 -  -3.2  -2.65264   CCACCAGCCACAGTA              GCGC TTTCATCG GCGC               GTTTTCACCGCCGTT  42 16
CHC44_RS12945 2487018 .. 2487049 -  -6.4  -2.56596   CGCTGGACGAAGGCA      TTGAGCGCACCGCC GCCT GGCTGCGCGATCAC       GGAAATTTACCGCGT  53 40
CHC44_RS12935 2484485 .. 2484498 -  -9.5  -2.57944   CATTATTAGATTAAT               GCCCC TTAC GGGGC                TGCGCTTCGCGCTGG  68 122
CHC44_RS12905 2479635 .. 2479658 -  -6.7  -5.13722   GTCAGTAAAACAAAA          TGCGCCCCT TAAATT AGAGACGCA           TTGATTTATTTAAAT  84 35
CHC44_RS12900 2478442 .. 2478460 -  -7.3  -3.22298   TCCAGCCATCAGTAA             GGGGCGC TCCGT GCGCCTC             TATACGGCTTCATCC  62 334
CHC44_RS12885 2477037 .. 2477056 -  -6.4  -3.01791   ACTCCGTTCTTAATA            CATGGGAG GCAA CTGCCATG             ATAACGATAAGCGCA  56 61
CHC44_RS12880 NONE
CHC44_RS12875 2476317 .. 2476338 -  -7.4  -2.76171   AGTGATTTAATATGA           TGGGTTAA ATTCTA TTAACCCA            TACACTATTTGATTC  58 74
CHC44_RS12870 2473599 .. 2473616 -  -4.7  -3.85698   CTGGTGGGGCATAAA             CTGGCGA AAGG CCGCCCG              TCGCATACCTTGCTC  58 492
CHC44_RS12835 NONE
CHC44_RS12830 2463918 .. 2463933 -    -4  -4.57569   CGATCGCCCGAAAAA              GCGAATC GGA GAT-CGC              CAGTAAGAAACGGGC  69 107
CHC44_RS12820 NONE
CHC44_RS12815 2459768 .. 2459788 - -12.6  -4.21462   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 98
CHC44_RS12800 NONE
CHC44_RS12795 2456518 .. 2456535 -  -9.8  -5.60993   GCCGGCATAAAAAAA             CCGGGC GCTAAG GCCCGG              TTTGTACGGCAGTGA 100 49
CHC44_RS12775 2453503 .. 2453519 -  -7.9  -4.36914   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  79 63
CHC44_RS12735 2446490 .. 2446519 - -16.5  -2.75577   CGATGCTAAAACGGA       CAACAGCACCGGG TTGC CCCGGCACTGTTG        CTGTATGGATTAACA 100 82
CHC44_RS12730 2442432 .. 2442446 -  -3.4  -4.18494   CAGGTTTACTCAAAA               GGCGGC GGA GCCAGC               ACTTCACGATTACCG  60 1
        lolA 2441640 .. 2441661 -  -2.3  -3.55254   TATTATCAGAAAAAT           CGAGCGA-CA GAT TGCTCACTCA           TCGCCTCTACTTACG  47 32
CHC44_RS12720 2440130 .. 2440146 -  -9.5  -3.18582   GATTGTATTGATGAA              CGTAAAC CGC GTTTACG              TAATAGCGACGTTTT  72 194
CHC44_RS12715 2438725 .. 2438738 -  -9.5  -5.61596   ACTGGCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTAGAAGAGGAG 100 51
CHC44_RS12710 NONE
        dmsB NONE
CHC44_RS12700 2434543 .. 2434581 - -17.5  -3.53811   TTGATGGTGGCTAAA   GGCGTATTCGGCCTGCA CGTTC TGCAGGCCGAATGCGCG   TCAACGCGTTAACTG 100 34
CHC44_RS12695 2433052 .. 2433077 - -12.7  -3.95749   AAACATAAACAAAGA         GTATGCAAGAC TCAC GTCCTGCATAC          GATTCAGAGAACAGT 100 40
CHC44_RS12690 2431189 .. 2431210 - -11.6  -3.53444   TTATCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGGT  85 268
       sopD2 2428795 .. 2428814 -  -4.9  -5.28826   AAAGCGTACAAAAAA            GGCTCCA TATCAG TGGGGCC             TTTTTAATGACTTTT  82 40
CHC44_RS12655 2422424 .. 2422443 -    -5  -3.70863   CAGACATCAGGCAAA            CGTTATTC ATGT GAATATCG             GTTTTATCATTCAGT  57 142
CHC44_RS12650 2421248 .. 2421268 - -10.4  -5.48623   AAACAGAAATAAAAA            CCCCACAG ACTGG CCGTGGGG            ATGAAAAAAGAAACG 100 43
        aroA 2419822 .. 2419837 -  -3.3  -5.33785   AACTATTATAAAAAA              CACAT AAATCA ATGTG               TTAAATCATCAACAA  81 120
CHC44_RS12640 2418892 .. 2418912 -  -5.3  -3.75629   TACCGTTAACGTAAA            CGCCGCGCA TTA TACGCGCCA            ACGCTCGCGACCGTT  59 141
CHC44_RS12635 2418125 .. 2418149 -  -7.2  -3.06696   GGGTTGTTTAACATA         CCCGCTGTCAA TCCT TTG-CAACGGG          GGTACTACAAATTCG  60 48
CHC44_RS12630 2416282 .. 2416299 - -14.1  -3.20382   CGTGAGATTGATTAA             GGGCGGC CGTA GCCGCCC              TTAGTGCTTGATTAC  95 111
        ihfB 2415900 .. 2415914 -  -7.1  -5.42514   GTATAAATGAAAAAA               GCACC CTGAC GGTGC               TTTTTTCGGGTTCAA  95 56
CHC44_RS12615 NONE
CHC44_RS12610 2410637 .. 2410676 -  -3.1  -2.78414   GGAAAGAGAAAGGTA CGGCAATGAC--ATTCATG ACTC CATAAATTCATCACTGCCG  CTGCATTGGGGTACG  43 41
CHC44_RS12605 2409407 .. 2409420 -  -3.9  -3.36452   ATCCTTCAATATTAA               CATAA TCGG TTATG                GTGCAGGGTCTATTT  50 21
CHC44_RS12600 NONE
CHC44_RS12595 2408329 .. 2408342 -  -5.3  -4.45077   GAAAAATGAGGAAAA               TCGTA ACGG TACGA                GAAAGCTGCCACTAG  71 122
CHC44_RS12590 2407083 .. 2407115 -  -5.4  -3.98378   GATACGGAAGAAGAA      GCCGCCGCCGTTAA GCAGG CCATCGGCGACGCC      CCTTTCCTGTTGGTA  63 245
CHC44_RS12580 NONE
CHC44_RS12575 NONE
CHC44_RS12570 NONE
CHC44_RS12565 2399047 .. 2399062 - -11.8  -5.42975   TCAGATAAAGAAAAA              GGCGGC TTTC GCCGCC               CCAGGCTAATGATAA 100 137
CHC44_RS12560 2396915 .. 2396939 -  -4.3  -3.35679   CTCCCCCAGCCACAA         CGGGG-GTCT ACAGCG AAACGCCCCG          TTGAAGCCAAACATT  52 71
CHC44_RS12550 NONE
CHC44_RS12545 2395472 .. 2395488 - -12.3  -5.28176   GTGACCGATAAAAAA              GCCTGCA ATG TGCAGGC              TTTTTCATTCTGCTT 100 39
        dpaL 2388725 .. 2388739 -  -2.8  -3.74397   ATGCGTATAAAAAAC               GCATTT TTT ACATGC               TACCTTTATTATCTA  52 59
CHC44_RS12510 2386770 .. 2386789 -  -3.4  -3.55444   CCTTGATCTGCCAAA            GGCGGTCG AGCT CTATCGCC             ATTTCGCCTCTCGCG  49 330
CHC44_RS12500 2382876 .. 2382904 -  -9.6  -5.40072   CGTCCGGCAAAAAAA       TACCCGGC-AGCG CTAA CGCTTACCGGGCA        TGTCTTACCTCTTTA 100 53
CHC44_RS12495 2381666 .. 2381695 -  -5.7  -4.84918   TGGAGAAATATAAAA       CAACCAGCGCC GGAAATAA AGCCCTGGTTG        TCTGATAAAGGCTAA  76 44
        zapC 2380755 .. 2380770 -  -6.8  -4.05033   GTTACGCCAGATAAA              CACCCG GACG CGAGTG               TAACCATCGACTGGC  68 261
CHC44_RS12480 NONE
CHC44_RS12475 NONE
CHC44_RS12470 NONE
CHC44_RS12465 NONE
CHC44_RS12460 2372251 .. 2372277 - -12.3  -6.20267   TCAAAAATAAAAAAA         CCGCCTCAGGC GCACG ACCTGAAGCGG         TTAAATTTACATTAC 100 48
CHC44_RS12455 2371837 .. 2371853 - -13.7  -3.74347   CCCATAAAGGCGAAA              CCTCCGC ACT GCGGAGG              TTTCTTTTTCTAAAG 100 49
CHC44_RS12440 2368740 .. 2368754 - -12.8  -5.24129   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 63
CHC44_RS12425 2365810 .. 2365830 -  -7.5  -3.37959   CAACCTGAAGACGAA            CAGCGCGTA CAC CAGGCGCTG            GAGGGTTTAAAGCAG  61 174
CHC44_RS12410 2361161 .. 2361171 -  -8.2   -3.9122   GAGCGCCTGAAATAA                 CCGC TAC GCGG                 GCGGGATGCTGTACC  72 50
CHC44_RS12395 2359326 .. 2359347 - -10.1   -4.1899   TGATTGTATTTAAAA           GGCCGGAAA GCGA TATCCGGCC            ATTTAAACTTTTATT  85 36
CHC44_RS12380 2356934 .. 2356946 -  -3.4  -3.04144   TCCTGATGTCGAATA                TGCA TCTCC TGCA                CCGTGCCGTCCTCTG  45 43
CHC44_RS12375 NONE
CHC44_RS12370 2355737 .. 2355768 -  -5.8  -5.06414   TTCGGCGAAGAAAAA      GGCAACAGCCGCTA TCTG TATCGTCTGTTCCC       GAAAGGCCCGGCAAA  84 86
CHC44_RS12355 2354243 .. 2354264 - -14.5  -5.04249   CGCCCAAAAAACAAA           GGGGTTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG 100 36
CHC44_RS12340 2351645 .. 2351673 -  -9.5  -2.71731   TTTACGTCTTAACTA        TGCCAGCGCCG TCACTAT CGGCGCTGACG        CAGACAATACTGCTT  64 157
CHC44_RS12325 2348825 .. 2348835 -  -2.4  -3.93038   CATTTGAACAGCAAA                 CAGC TAA GCAG                 CAGTATAAGATGGAG  54 440
CHC44_RS12300 2344782 .. 2344798 -  -2.2  -3.81651   ATGGCAAGTAAAATA              GCCC TAATGGGAT GGGC              TCTAAATTAGCTCCC  51 32
CHC44_RS12295 2344274 .. 2344289 -    -6  -4.08767   GCCATGTTGGCAAAA              CGGGCC GCTG GGCCAG               CCGGTACTTAACGGC  67 205
CHC44_RS12275 NONE
        hpaE 2338700 .. 2338717 -  -2.7  -3.83026   CTTGCCCATATCAAA             CT-CCCCA TTT TGGGATAG             GATGGTCGCCCATTG  52 3
        hpaD NONE
CHC44_RS12260 NONE
        hpaH NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
CHC44_RS12235 2332351 .. 2332373 - -17.8  -3.68359   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC 100 49
CHC44_RS12225 2330994 .. 2331021 - -14.9  -4.30933   GATAAAGGCAATAAA        CCGAGGGTGGGC TTTCT GCCCACCC-CGG        ATTTACATGCACCCG 100 28
CHC44_RS12205 NONE
CHC44_RS12200 NONE
CHC44_RS12195 NONE
CHC44_RS12190 2326068 .. 2326101 -  -4.3  -3.83026   TTTTCTTACAGTAAA     CGCGTTAGCGCCGGG AAAC CCCGGCGCATATTCA      GAACGTTTTTGCCCA  58 23
CHC44_RS12185 2324694 .. 2324723 - -15.7  -3.34591   TAAAAACGTATAACA       CAAACGCCCCCGC CTGC GCGGGGGCATATG        GCTATTTTGCAGCAG 100 27
CHC44_RS12170 2323218 .. 2323235 - -14.1  -6.02919   TTATAAACAAAAAAA             CCGCCGG AAAT CCGGCGG              CGGTGGCGCATGACA 100 85
CHC44_RS12165 2322024 .. 2322046 -  -9.8  -3.59979   TTCGCTGAGCGTAAA           CACTGCCGCC GCT GGCGGTAATG           CCAGCCTGATGACAA  77 499
CHC44_RS12145 2316143 .. 2316170 - -12.8  -3.63744   CCGCCTGGTAAAATA        TGTCCGATGGCA ATAA TGCTATCGGACA         TGTCGGTTATTCCGC  95 32
CHC44_RS12140 NONE
CHC44_RS12135 2314456 .. 2314479 - -14.6  -3.58905   ACGCTTTATAGACAA          CAAAGCCCGG TCTC CCGGGCTCTG           AAAGTCAATGCTATA 100 41
CHC44_RS12110 NONE
CHC44_RS12105 2308274 .. 2308292 -  -4.6  -3.28416   GATTATCGATATGAA             TACTAAGC AAA GATTAGTA             CAGTAACTCTTTAAC  52 46
CHC44_RS12100 NONE
CHC44_RS12095 2305496 .. 2305515 -  -7.8  -3.71378   CATATTTAAGAAAGA            GCTCGTAC GAAT GTACGGGC             TTTTTTTCGCATTAT  69 143
CHC44_RS12070 2303830 .. 2303845 - -11.8  -3.64703   CGTTTTTTAGCGAAA              CCCGGC CCGC GCCGGG               TTGATGTCAATATCC  89 32
CHC44_RS12065 NONE
CHC44_RS12060 NONE
CHC44_RS12055 2301845 .. 2301865 -   -14  -4.07455   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTATTTTGTGAC 100 29
CHC44_RS12025 2298220 .. 2298234 -  -3.6  -4.11216   CTGCCACTTTTAAAA               GTTTCA TGG TAAAAC               CCCCATCGGATTGAT  57 59
CHC44_RS12020 2297730 .. 2297745 - -10.4  -5.75342   CCTCCCGAAAAAAAA              CAGGGC TTAT GCCCTG               TTTTTTTATTAGCGC 100 51
CHC44_RS12015 2297383 .. 2297393 -  -3.2  -4.77036   CGCCACCATCAAAAA                 CTAC TGT GCAG                 AAGGCGGCCATTGTT  69 15
CHC44_RS12010 2296926 .. 2296938 -  -3.3  -2.82015   TTTATATCTATGACA                CCGCC GTT AACGG                TACTCAATATTCATC  43 19
CHC44_RS12005 NONE
CHC44_RS12000 2294840 .. 2294852 -  -3.3  -4.13304   AAACCACCGGTAAAA                CGAGA AAG TCGCG                CCACGATCGGGTAGT  57 56
        mdoG NONE
CHC44_RS11985 2289321 .. 2289339 -   -11  -4.91511   ATTTCACTATAAAAA             TACCGGCA TCA CGCCGGTA             TTTTTCACCTCACTC 100 55
CHC44_RS11980 2289033 .. 2289045 -  -6.2  -2.52015   TTGATACCGAGGAAG                GCCG TACTG CGGC                AGACGAATGGGATGA  53 48
CHC44_RS11955 2285011 .. 2285044 - -16.8  -3.53761   TAACGCCTGGCGAAA     TGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCA      AAATATTACTCAGCC 100 31
CHC44_RS11940 2283201 .. 2283217 -    -5  -2.52464   TTCCTGCGTAACGTA              CTGCCG GGTAT CGGCGG              TTGTTTACATGGGGC  46 448
CHC44_RS11895 NONE
CHC44_RS11890 2276088 .. 2276101 -  -2.3  -2.62515   AATGTTCTCACATTA               CTCTC CCAG GTGAG                CTAACAAAGAATCCA  39 9
CHC44_RS11885 2274919 .. 2274929 -  -3.2  -2.59881   CATCGACCGGATAAC                 GCAA CTT CTGC                 CGTATCCGGCTGTAT  42 256
        mviN 2273070 .. 2273082 -  -3.3   -5.1101   CGATTACCGAAAAAA                CGCAG CTT CTTCG                CGACCTCAACCAGCA  76 264
CHC44_RS11855 NONE
        flgC NONE
CHC44_RS11845 NONE
        flgE NONE
        flgF NONE
        flgG 2267233 .. 2267264 - -11.4  -3.09004   TCATCTTCAAAATCA      GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC       CCTTAGAGTTGCGTC  79 28
CHC44_RS11825 NONE
        flgI NONE
        flgJ NONE
CHC44_RS11810 NONE
        flgL 2261689 .. 2261717 - -14.6  -5.55664   TGACGACTAAAAAAA        TGCCCGCGCC GGGGTGGAT GGCGCGGGCA        GACAAAACATATCCA 100 69
CHC44_RS11790 2257787 .. 2257798 -  -3.6  -2.88544   TTCTATGCTTATAGA                GACG TCTA CGCC                 AGTGGATGAACATTT  44 144
CHC44_RS11785 2256736 .. 2256762 -  -2.8  -2.81535   TTATGAGAAAAGTGA         GATTCGGGCAGA TAA CCTGCCCGAGAG         AGGAACTATTTTGCG  41 31
CHC44_RS11780 2255761 .. 2255787 -    -3  -3.14344   TATTCTCGCGAGCAA         CTCTCAGGAC GTTTACT GTCCTGAAAC         CTTCCCCTTGCGACT  45 107
CHC44_RS11775 2255372 .. 2255390 -    -3  -4.29106   CGCTACAGCAATAAA             CGGCCTAC TCT GTAGGCTT             TTCAAATACCGCTAA  58 77
CHC44_RS11765 2254035 .. 2254065 -  -6.1  -2.71731   CTTACTCCTCAATTA      CGGTTTATCCCCGC GTCC GCGGGGA-AGACCT       ATTACTTACGCTTTA  53 27
CHC44_RS11760 2253801 .. 2253812 -  -5.8  -2.62184   TCGGCTTTTACACCA                CAGG CACG CCTG                 TGATGCAAAAGGCAT  50 55
CHC44_RS11755 NONE
CHC44_RS11750 2251610 .. 2251620 -  -2.4  -2.92669   ACTAGAAACGAATCA                 GCGC GGA GCCC                 CAGGTGAATCCACCC  41 1
        fabD NONE
CHC44_RS11740 2249771 .. 2249784 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 145
CHC44_RS11735 2249477 .. 2249503 - -13.1  -5.02287   GACAAAAAGATAAAA        CT-CAGGCGGTC GAAC GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
CHC44_RS11730 2248139 .. 2248155 -  -7.2  -5.24531   ATGCCTGATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTATTAATGTCT  91 55
CHC44_RS11725 NONE
CHC44_RS11720 NONE
CHC44_RS11715 NONE
        holB NONE
CHC44_RS11705 2243767 .. 2243785 -  -8.2  -2.77899   TTTGCTTATTAATTA             CGAGCTTT AAA AAAACTCG             TTTAACGGATTGATG  60 27
CHC44_RS11700 2242015 .. 2242032 - -12.7  -5.14965   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC 100 52
CHC44_RS11690 NONE
CHC44_RS11685 NONE
CHC44_RS11680 NONE
CHC44_RS11675 2237245 .. 2237258 -  -2.3  -2.76964   CGACATTCAACATTA               CTGGG CCCA CACAG                CTCTCCTTATCCTTT  40 32
CHC44_RS11670 NONE
CHC44_RS11665 2235609 .. 2235624 - -10.4  -5.67063   TTGAGCATAAAAAAA              CCAGCC GCAA GGCTGG               TTATCCGGTCACTGA 100 63
CHC44_RS11660 2234065 .. 2234096 - -10.2  -3.36878   GCGAGTGATGGAGAA      GCG-CTCACCAGC GCGAGCA GCCGGTGAGGCGC      AGAGAAATTAATGCA  76 33
CHC44_RS11655 2233337 .. 2233363 - -10.1  -5.60993   CTTCGGATAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC 100 48
CHC44_RS11645 2232107 .. 2232128 - -15.9  -5.28176   CTGACCGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTCTCTTTTTATTG 100 75
CHC44_RS11630 NONE
CHC44_RS11625 2225274 .. 2225297 -  -3.2  -3.83675   CAAGCCAATTAACAA          TGA-TAAAGGC GAC GCCATTACTCA          GCCCCCATCAGGCTC  53 19
CHC44_RS11620 NONE
CHC44_RS11615 NONE
CHC44_RS11610 2222122 .. 2222141 -  -3.4  -4.11394   AGGCGAGTGGCAAAA            CGATGTCG GCGA CGCCAGCG             CCATTTATGAAGAGT  58 151
        pepT 2215205 .. 2215217 -  -3.3  -2.64218   ACGCTTCACCACAAT                GCGTA ACA TTCGC                TACTGGCCGCGCTTC  42 25
CHC44_RS11570 2213846 .. 2213874 -  -8.8  -2.71074   GAAGGATAAGAACAT       CGCAATGCCCGGC GACC GCCGGGC-TGACG        CAAACTATCCACAAC  64 30
CHC44_RS11520 2204184 .. 2204202 - -11.7  -5.31855   TACTAATAATAAAAA             CGGGGAC GTTAA GTCCCCG             TTTTAGTTTTTAACA 100 51
CHC44_RS11515 2202567 .. 2202577 -  -6.8  -4.91194   ATAATAAATATAAAA                 GCAG TTA CTGC                 CTACCTCAAGAAGTA  82 91
CHC44_RS11510 2202173 .. 2202190 -  -2.1   -4.6341   ATCATAAAAAAAATA             TTCAAAT AAGT ATTTAAA              ATTATTGTTTTGAGG  64 48
        pagC NONE
CHC44_RS11465 2196477 .. 2196489 -  -3.4  -4.20932   AATACTTATTCAAAA                CTGA AGTGG TCAG                TGGGAGTCGAACCCA  60 88
CHC44_RS11455 2194885 .. 2194909 - -12.8  -2.64354   TTATACACCTACAAT          TTGCGCCCGG CGGCT CCGGGCGCCA          TACCTGAAGATATGA  81 66
CHC44_RS11450 2194367 .. 2194383 -  -6.5  -3.38361   AAAGTTCAACATCAA              GGCAAGC ATT GCTTGTC              CACTGACTACATAGG  59 120
CHC44_RS11445 2193821 .. 2193852 -   -16  -2.87211   ACTTTTCGCTACAGA      CAATGAAGGCCCGT CTAA ACGGGCCTCCATTA       ATGCTTTTATGATTT 100 32
CHC44_RS11440 2192065 .. 2192075 -  -2.4  -3.76586   TCTTAAACACAAATA                 CCCG GAT CCGG                 TCATTACGCCTCCTC  50 427
CHC44_RS11425 2189071 .. 2189088 -  -2.7  -2.62111   GCCGCAAAAAATGAC             TGAAGAA CAAT TTCATCA              CCGACAGGTCCAGGT  40 23
CHC44_RS11420 2188117 .. 2188132 -  -5.4  -2.82516   CGGGGCAGGATTATA              GAGCAT CGGG ACGCTC               CAGCGATCGATTAAG  50 5
CHC44_RS11415 NONE
CHC44_RS11410 NONE
CHC44_RS11405 2185871 .. 2185892 - -15.9  -3.21276   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 68
CHC44_RS11395 NONE
CHC44_RS11390 2184075 .. 2184093 -  -4.4  -4.20368   TTATTTCAACAGAAA             CTCAGCGG CCA CCGCGCAG             GTGGCCTTTTTTGAT  64 47
CHC44_RS11385 2183317 .. 2183336 - -12.2  -5.63504   AACGGCAGAAAAAAA            GCTCGCTA TTCA TAGCGAGC             TTTTAACATTGCATC 100 45
        aadA 2182374 .. 2182396 -  -2.8  -3.21395   ATGGCCCGCATAAGA          TCATCTGCT TACTTC AGC-GATGA           GAACCTATTAAGTAG  45 89
CHC44_RS11375 NONE
CHC44_RS11370 2180758 .. 2180783 - -11.1  -3.93236   TATGAAGGGTATAAA         CAAGGGAGGGG GTTA CTCCTCCCCTG          TTCATTAATAATGTA  86 47
CHC44_RS11350 2179445 .. 2179457 -  -6.9  -2.60723   TCATGGGGAATTAAC                GCGCG CGT CGCAC                CAAAGATAGGGCTGC  55 8
CHC44_RS11345 2178576 .. 2178597 - -13.7  -2.60725   CGAAAGGAGAGCAAT           GACCCGCCG TTGA CGACGGGTC            CAGGGGGTTAAGACT  86 33
CHC44_RS11335 NONE
CHC44_RS11330 2177808 .. 2177836 - -13.9  -4.74706   TTCAATACGCAAAAA        CCGCATCACGC TGGCGAC GCGCGATGCGG        CTTCTGATTTAAAAA 100 74
CHC44_RS11325 2176866 .. 2176902 -  -2.9  -3.15861   GATTATCTTTATCAA    TACCGAGTGGTTGAGTT TAT AACCCACCTGTTCGGTA    CGACATTGCTCACAT  45 137
CHC44_RS11320 NONE
CHC44_RS11315 2176405 .. 2176429 - -11.6  -3.63694   ATTCATTTTGAATAA          TAAAGGCTAC CTGTC GTAGCCTTTA          TTATCTCTGAAAGTT  87 47
CHC44_RS11305 2175701 .. 2175719 -    -6  -2.57581   TTAACTGAAACATAT             TTTCTTGC GCC GCATGAAA             CTCATTATCAGATTG  53 73
CHC44_RS11300 2175021 .. 2175036 -  -3.2   -4.4009   CGCTATCCGACAAAA              GTACCG TAAG CGACAC               CATCACAGGAGGGAA  62 376
CHC44_RS11285 2172753 .. 2172785 -   -12  -3.60296   TACGCTGATGGGAAA     CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG      TACGGTACTTGGCGT  81 96
CHC44_RS11275 2171611 .. 2171630 -  -3.5   -3.1634   GCCGAAATGACTGAA            GTCGCGA AGGGTG TCGCTAC             ACACCAACGTTTAGT  47 512
CHC44_RS11260 2169395 .. 2169419 - -12.9  -3.69354   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 147
CHC44_RS11245 2164817 .. 2164841 - -15.1  -2.69151   GCGTTTCAGACAGCA          CAAAGCCTGCA TAA CGCAGGCTTTG          TCATGGTTTTTCCGG  89 54
CHC44_RS11240 2163324 .. 2163336 -  -3.3  -3.41798   CGGTAAAACAATACA                GGACT CTT AGACC                CTACGGTAATGTCCG  48 73
CHC44_RS11235 2162370 .. 2162416 -  -8.8   -2.7752   TATAGGATCTGAAAG GCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACAC ATTTTATCCGGCGTC  64 39
        msrB NONE
CHC44_RS11210 2158724 .. 2158744 -  -8.3   -2.7535   CCGGTCAATACATCA            CGCAACGGT GAG ACCATTGCA            TAGATCTTTGAGCCG  64 324
CHC44_RS11185 2154258 .. 2154302 -  -3.6  -2.71731   CTGATGTGGTAAGTA TCACTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAGTTT TATCCCTCAGCGTCA  43 38
CHC44_RS11175 NONE
CHC44_RS11170 2150937 .. 2150954 -  -9.8  -3.53012   TTTGCGCCGGGTAAA             GCCGCC AACGCG GGCGGC              GTGGCGACATCGGGG  71 271
CHC44_RS11160 2149263 .. 2149284 -  -4.3  -3.03124   GTGTACGCCGGAAGA           GGCGCTGGAG TAC CCCCT-CGCC           CCGGCGGATATTCCG  47 54
CHC44_RS11145 NONE
CHC44_RS11140 2146382 .. 2146401 -  -2.8  -2.62616   GCATGTTCGACAGGA            CGAATCAC CCGC ATGATGCG             CCTCCCGTCTGAAGG  40 10
CHC44_RS11135 NONE
        astD NONE
        astB NONE
        astE 2141546 .. 2141580 -  -8.6   -2.7634   AACTGTATCCCAAAT     CATCCCTGTAACCCTA ACG TGAGCTTACAGGGACG     TTTATCAGGGCAGTC  64 30
CHC44_RS11115 NONE
CHC44_RS11110 2140696 .. 2140744 - -11.7   -5.0065   CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG 100 45
CHC44_RS11095 2138253 .. 2138268 -  -7.5  -5.64274   GCAGGCACAAAAAAA              CCGGC TCGCAG GCCGG               TTTCCTTGAATGTTC 100 57
CHC44_RS11085 2137616 .. 2137634 - -11.8  -3.38603   AAATACCCTTAAATA             CCGCAATA AAA TATTGCGG             TTAGTGTATGAAATA  85 70
CHC44_RS11080 NONE
CHC44_RS11075 NONE
CHC44_RS11070 2134922 .. 2134943 -  -2.2  -4.15044   CCCGCTCGTAAGAAA           TAGCGTGA CGTTCC CCGCGCTA            TTGGGGCAAGCGTGA  55 69
CHC44_RS11065 NONE
CHC44_RS11060 2132704 .. 2132725 - -15.9   -5.1361   ATAAACGGCAAAAAA           TGCGGCGCA TTCC TGCGCCGCA            AACTCAGGAGCTAAA 100 36
CHC44_RS11050 2129947 .. 2129967 -  -9.7  -4.72272   GTCTGTCACTAAAAA            CGCCGGT CTCCAGT ACCGGCG            TTTTGTTTTTTTCTT  91 39
CHC44_RS11030 2125847 .. 2125859 -  -6.3  -2.83903   CCGCGGAAAAAGGCA                TTACC TTT GGTAA                TATTGACGCCATTGT  50 426
CHC44_RS11010 2122855 .. 2122877 - -13.5  -3.69395   GTCACCACGGAATAA           CCGGGTTAC GTAAT GTAACCCGG           TACAATATTACATCT 100 33
CHC44_RS11000 NONE
CHC44_RS10995 2120438 .. 2120459 - -10.3  -2.88758   ACAACCTTCGACACA           GACGAAAAT CGCT ATTTTCGTC            CGGCATGACGATGGT  72 135
CHC44_RS10985 NONE
CHC44_RS10980 2117792 .. 2117817 - -14.1  -4.66987   CATAGGCGAACAAAA         CCTGTGAAGCC CGAA GGCTTCACAGA          ATTGTTACTTGAAGG 100 43
CHC44_RS10975 2117524 .. 2117538 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  68 29
CHC44_RS10970 2117103 .. 2117125 -   -12  -4.99568   GAACAGTAAATAAAA           GAGAGGGAGC CAG GCTCCCTCTT           TTCACTGGCTTATGC 100 35
CHC44_RS24115 2116905 .. 2116920 - -10.4  -5.76633   TCAGATACAAAAAAA              GCCTCC ATCA GGAGGC               TTTTTTGCGCTGTTT 100 50
CHC44_RS10965 NONE
CHC44_RS10960 NONE
        ihfA 2113008 .. 2113022 - -12.8  -5.64421   ACTTGAAAGAAAAAA               GGCCGC AAT GCGGCC               TTTTTAGTTATACGG 100 146
CHC44_RS10950 NONE
CHC44_RS10945 NONE
CHC44_RS10940 NONE
CHC44_RS10935 2109887 .. 2109902 - -10.4  -3.04144   GTTGTACTTTTAACA              GGGCGT GAAC ACGCCC               GTTTTTAATAAAAGT  73 150
        ydiV 2108928 .. 2108951 -  -3.1   -4.2679   CAACGGGCAGTAAAA          GACAGG-GTC ATAGG GCCTCCTGTC          TTCAGTGTAGACGGT  60 74
CHC44_RS10925 2107459 .. 2107498 - -13.8  -3.91084   CTACTGTTAACCAAA TAGCGCTG-CGCCAGCAG ACGATG CTGCTGGCGTCAG-GCTA  ACTTGAACAACTGAC 100 23
CHC44_RS10905 2102323 .. 2102358 - -15.4  -3.86524   ACACTGCGGTATAAA    TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT     TACACTACTTCTTCA 100 30
CHC44_RS10875 2095783 .. 2095801 -  -4.6  -3.62096   TGGCAGGACGCCAAA             TTCTGAAA GAC TATCAGAA             CAAGTAAGGATCGTA  55 108
CHC44_RS10825 NONE
CHC44_RS10820 2082469 .. 2082498 -  -2.8  -2.74144   CGCTTATGTGTAAAC       GTGCACAGTATA TCACCT TTTTCTGCGCAC        ATTTTGACCAAAAGC  41 71
CHC44_RS10815 2081996 .. 2082026 - -12.7  -5.45802   CCCGGAAAAGAAAAA       CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG       TTCCGGCCCCATCCG 100 256
CHC44_RS10805 NONE
CHC44_RS10800 NONE
CHC44_RS10795 NONE
CHC44_RS10790 NONE
CHC44_RS10785 NONE
CHC44_RS10780 2074598 .. 2074622 - -13.7  -3.60952   GAATAACAAAATACA          CGCTCTATCCA ATC TGGATAAAGCG          ACGTCGCCGTCCGAC 100 79
CHC44_RS10775 2073474 .. 2073492 - -14.6  -4.57755   ACGCACGATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 53
CHC44_RS10755 2070568 .. 2070579 -  -2.2  -3.73072   AATTTCCGGATGAAA                GC-CC AGC GGCGC                ATTTTCGCCCATGTC  51 117
        ttrS NONE
        ttrR 2058750 .. 2058765 -  -4.8  -4.99947   CTCAATTAAACAAAA              TTTGAT GCAA ATCAAA               GAAATAACGCGGTTT  77 46
CHC44_RS10705 2058121 .. 2058132 -  -4.4  -3.39216   GCTTCACGTAAAAAT                CACA CCAA TGTG                 CTGATGCATATCCAG  51 369
        spiC NONE
        spiA NONE
CHC44_RS10670 NONE
CHC44_RS10665 2049095 .. 2049107 -  -5.5  -3.53444   CTATCCGTGTCCAAA                CTGGC TGC GCCAA                TTAACGCCTGGTGGG  57 64
        sseA NONE
        sseB NONE
CHC44_RS10650 NONE
        sseC NONE
        sseD NONE
CHC44_RS10635 NONE
CHC44_RS10630 2044496 .. 2044509 -  -3.9  -3.06183   TTGACGCTGACGGAA               TATGA ATTT TCATA                TTTCGTTCTGTTATT  47 40
CHC44_RS10625 NONE
CHC44_RS10620 2043018 .. 2043033 -  -3.2  -3.32516   AGAAAGCAATGAACA              TCCGGT ATAT ACCTGA               AAACGATTACTCCGG  48 32
CHC44_RS10615 NONE
CHC44_RS10610 NONE
CHC44_RS10605 NONE
        ssaJ NONE
CHC44_RS10595 NONE
        ssaK NONE
        ssaL 2039231 .. 2039253 -  -3.4    -2.882   CCTAAATATTGAAAG           CCAGGTATCA GAA TAAAACCTGA           TTTATCTTTACTTCA  44 10
        ssaM NONE
        ssaV NONE
CHC44_RS10570 NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssas NONE
        ssaT NONE
        ssaU 2030524 .. 2030538 -  -7.8  -3.21276   CGCTGCGCGATAATA               CGACGA TAG CCGTCG               CATGGCGGCTATTTT  64 481
CHC44_RS10515 2028252 .. 2028278 -   -13  -2.70932   GTTCCTCGCTAATCA         TCTCCCCCGCAT TTC ATGCGGGGGAAT         CTTATTTTCCGTTAG  85 37
CHC44_RS10500 2024112 .. 2024125 -  -9.5  -3.05844   CGCTGGAGCGCAACA               CCGGC GCGG GCCGG                CTGGCAGGCTTTATG  67 460
        ynhF 2022740 .. 2022750 -  -8.2  -3.53012   CTGCCTGGCGCCAAA                 CGCC GGT GGCG                 AACCGACCGGGAAAC  65 428
        grxD 2020825 .. 2020842 - -11.3   -5.0133   GATGGCGGTAAAAAA             GCGACCT TTAC AGGTCGC              TTTCTCCTTGCACAG 100 42
CHC44_RS10440 2017417 .. 2017429 -  -4.1   -2.5333   TGAACCATAACAGAT                TCCTC ATA GAGAA                TAATGAGGTTGAGTA  44 56
CHC44_RS10435 2016439 .. 2016495 -  -2.4  -3.22113   ATCGCTTCATAAAAC CTCCGTTACATGTGGTCGCCTGT TAAGTGTAAACC ACTGGCGAAAACATGTA-CGGAA AGTCAACGAGTTGGC  44 43
CHC44_RS10430 2015783 .. 2015799 -  -8.7  -2.95521   GCTACAGGAACTACA              GCGTATC TGC GACACGC              TCGCACATCATCATC  62 138
CHC44_RS10410 2012120 .. 2012154 -  -9.3  -2.92613   CTCCACGCTAAACCA    GGCTTTACGTGTGGTC ACAT GGCCACACGT-ATGCC     CCTGCACCTCAATCG  67 34
CHC44_RS10400 2010251 .. 2010264 -  -2.4  -3.33744   GGGTCCGGGAAAAAT               TCAG TTAACT CTGA                GTTATTGGGTTAGCC  45 16
CHC44_RS10395 2009798 .. 2009832 -  -6.4  -4.11183   GTTGATCAGAAATAA    TCAGT-GGGTGGCGC TATTGT GCGCCCCCATACTGA     AAATCTCAACGCTTC  68 31
        pdxH 2009079 .. 2009092 -  -8.1  -2.57982   ACATAGCATAAAACG               GCGGA TTCA TCCGC                ACCAGTGCTTAAAAC  59 56
CHC44_RS10385 2007688 .. 2007707 - -12.2  -4.53398   GAACATCAAAAATAA            GGGAGTGA TTTC TCACTCCC             TGTTACTTAATGCCT 100 40
CHC44_RS10380 2006701 .. 2006716 -  -3.2  -3.90048   CGTGTCGCAAAAAGA              CCGACCG TTG CGG-CAG              CGCTTAAAGCGGAAG  54 110
CHC44_RS10315 1994954 .. 1994966 -  -4.7  -4.60041   AGCGATGGCGAAAAA                CGTGC GCT GCGCG                AAAAAGTGGCCGCGG  71 120
CHC44_RS10285 1988618 .. 1988649 -  -9.4  -3.28785   CGGCAAAATAGCGAA      TCATGTTACCGCCC CGCA GGGCGGCGACATTA       CTTAACGCAGCGTGC  74 23
        fumC 1986727 .. 1986746 -    -7  -5.44119   GCCAGTTGAAAAAAA            GCCTCGCG TCGC CGCGCAGC             GTCCCGCCGTGGACG 100 355
CHC44_RS10255 1981208 .. 1981234 -  -8.7  -2.56596   GCCTTTATCAAGTCA         TAGTGGCGATG CTCAT CACCGCCACTG         TTCAAAAAACAGACA  63 140
CHC44_RS10245 1979920 .. 1979959 - -12.4  -3.61398   CTGGTGGGTTAACAA  CCTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAAA   CCACGGTCTTTGCCA  95 44
        pntA NONE
CHC44_RS10225 1973802 .. 1973819 - -12.7  -4.87786   TGAAGTGTATAAAAA             CGGCCTC CGAA GAGGCCG              CCGCACGTTTAAAAG 100 42
CHC44_RS10215 1972288 .. 1972298 -  -8.2  -2.82208   AAATCAGTTAGCACA                 GCGC ATT GCGC                 CAGCTCAGGCAGAAG  60 48
CHC44_RS10210 NONE
CHC44_RS10205 1971479 .. 1971493 -  -7.8  -3.69354   CGCGATAAGCTGAAA               GCCCTG GCG CAGGAC               TAATACGCGAATCGC  69 63
CHC44_RS10180 1967495 .. 1967505 -  -2.4  -3.37612   TTTAAGCGTAATTAA                 TCCC GTC GGGC                 AGCCAGTAATAGCAG  45 11
CHC44_RS10175 NONE
CHC44_RS10170 NONE
CHC44_RS10165 1965252 .. 1965280 - -13.2  -2.73441   GATGATTTGTGAAAT        GACCGGCGAGTA TCAGT TACTCCCCGGTC        TGCTGATTGCCTGTG  79 67
CHC44_RS10105 1951486 .. 1951506 -  -8.1  -4.21908   GAGTACCAGGGAAAA            GGCCTGGCG TCA CGCGCGGCC            AAACTGGCGATGGAT  77 315
CHC44_RS10090 1950300 .. 1950332 -  -8.3  -4.67755   ATATTGATGTAAAAA      GCGCTGCCAGATCAC AAA ATGTTCTGGTCGCGC      GGCAATGTTACGTAC  89 33
CHC44_RS10085 NONE
CHC44_RS10080 1947938 .. 1947952 -  -4.2   -3.0644   AGGCAATCTCTAAGA               GGTAAG ATG CGTACC               ACTTACTCGCAATTA  47 47
CHC44_RS10075 1946483 .. 1946537 -    -8  -4.99947   GCTAATTAAACAAAA GTGACCGGGCAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGTC-GA-CAC GATTTAACTCGTCTG  87 29
CHC44_RS10070 1944720 .. 1944736 -  -6.5  -2.64099   CCGGGTCATGATAAG              CGGCACG GGT CATACCG              GGATTATCAAAGCCA  51 220
CHC44_RS10050 1940518 .. 1940531 -  -5.9  -3.33792   ATTATTTACATAATA               CCACC ACAT GGCGG                AAAATATATTTTTTG  56 231
CHC44_RS10040 1940142 .. 1940160 - -12.4  -5.88565   GTCAGAATAAAAAAA             TGCGAGCC TAT GGCCCGCA             TCGTATGCGCAATAT 100 75
CHC44_RS10030 1938484 .. 1938501 - -10.5  -5.81412   GGCAGGCAAAAAAAA             CCGCCGG TTCA CCAGCGG              TAAATGCTTGCATGG 100 267
CHC44_RS10015 1935308 .. 1935342 -  -2.3  -4.03234   GTGCCGCCACACAAA    TACCG-GA-TCACCA ATATGCA TGGCGAATCACGGTA    TATGCTGCCGCTGAA  55 419
CHC44_RS09995 1933570 .. 1933603 - -18.3  -3.13639   AACCGCATTAAGACA     TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAA      AATGCGCCTTAGTGG 100 34
CHC44_RS09980 1929870 .. 1929888 -  -4.4  -2.66316   CCTGCGAGTATAGCA             GAGGGCGC CAC GCGACGTC             AGGGCGATTAGACGC  46 33
CHC44_RS09975 NONE
CHC44_RS09970 1928516 .. 1928531 -  -3.2  -3.55761   GATTTATCGGGGAAA              GCGTCA GCAA CGACAC               ACTGCCCTACTGCTG  50 32
CHC44_RS09965 1927201 .. 1927214 -  -2.3  -3.12327   TGGGCAGACTCAACA               CACGA CAGG CCGCG                AAAGCCAGGTGTGGG  42 179
CHC44_RS09955 1924817 .. 1924833 - -10.1  -5.49234   ATAGTCAATAAAAAA              GGACGCC AGA AGCGTCC              TGAAATAATAAAAGA 100 127
CHC44_RS09905 1916003 .. 1916042 -  -7.3  -3.60035   GATAAAGAGAAGCAA  CCGCCGGTAGTCTC CATTACCTTCGCC GAGACTACCGG-GG  AAACTAAACAGAGAC  67 48
CHC44_RS09900 1914946 .. 1914959 -  -8.1  -4.07678   GGCCAAAACAGGAAA               CGTCG CTGC CGACG                AACCTGATCACCTAC  77 294
CHC44_RS09870 1907635 .. 1907646 -  -2.2  -4.57569   TTACCCTTTGAAAAA                CCAT TGAT ACGG                 CGATTGTTATATAGC  61 187
CHC44_RS09865 1906503 .. 1906524 -  -8.1  -4.08216   TTATTCTCGGTAAAA           CCGGTAGCAT TAT ATG-TACCGG           TTTTATTTTATTCAT  74 37
CHC44_RS09845 1904759 .. 1904770 -  -2.2   -3.1505   ACCACTTGGCATGAA                CAAC CATA GTCG                 TGGCCGCGTTGGTAA  44 290
CHC44_RS09820 NONE
        nhaC NONE
CHC44_RS09810 1898002 .. 1898018 - -10.8  -3.05384   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTTACTGGCGC  76 97
CHC44_RS09775 1888584 .. 1888597 -  -6.7  -4.05714   AGTTTTAAGGACAAA               TTCGC TTAC GCGAA                AGAAACGTAACCCCT  70 68
CHC44_RS09770 1888354 .. 1888375 - -13.1  -5.38054   TCCTATAAACAAAAA           CACCATTGC AGAT GCAATGGTG            TTTAACGTCATTTCA 100 52
CHC44_RS09765 1886498 .. 1886523 - -11.1  -2.82317   TAAAGAAGAAAGTGA         TATCCGGCGGC ATTC ACCGCCGGGTA          CGTATTAAATGGAAG  74 30
CHC44_RS09760 1885162 .. 1885187 - -13.4  -3.89346   TCGCGATCTGATAAA         CAAGGCGCTA TCCTCG TAGCGCCTTG          TTTTCATCTGCTGTC 100 70
CHC44_RS09735 1878989 .. 1879005 -  -6.7  -2.80252   AGTTTCATAAGATTA              CAAATTA TTT TAATTTG              TGTGATCGAGATCTC  52 408
        ompD 1877731 .. 1877751 - -13.3  -5.13344   ACATCAAGAGAAAAA            GCCAGCCCT GAA AGGACTGGC            TTTGTATTCAGACTA 100 49
CHC44_RS09720 1876891 .. 1876907 -  -9.3  -4.82901   GCGCCGGCAGAAAAA              GCGGCGG CGG CCGGCGC              GATAGAAACGATGGC  93 369
CHC44_RS09710 1874880 .. 1874894 -  -7.1  -3.42405   CACAAAAAAGAGACA               GAGCG TCACG CGCTC               TTTTGAGAACTTATT  65 174
CHC44_RS09705 1873403 .. 1873416 -  -2.4  -3.53444   CGATTTGGCGTTAAA               CCAT TGCCGG ATGG                CCGTCCTACAGGTGC  47 49
CHC44_RS09695 NONE
        narH NONE
CHC44_RS09685 NONE
        narI 1866622 .. 1866653 - -12.2  -2.89421   TGAAGAATCATCATA      GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC       GTTTTTCTTTGCCCG  80 67
CHC44_RS09675 1865245 .. 1865256 -  -7.2  -3.73968   AAATTGCTCAGCAAA                CGCC GCAT GGCG                 AATACCGTCTGATGC  65 465
CHC44_RS09660 1863508 .. 1863518 -  -2.4  -3.26568   TGACAGGGATAAAAC                 CGCC GGC GGAG                 CATCCTACCTGCAAT  44 129
CHC44_RS09655 1861858 .. 1861881 - -14.6  -3.74747   GCAACGCGCATTAAA          CCCGGCAGGCC TGG GGC-TGCCGGG          GAAGGGGAATGTTAT 100 37
CHC44_RS09640 1857964 .. 1857982 - -14.6  -3.19642   ACTATGACTTATCAA             TAGCGGGG ATT CCCCGCTA             TTGCCGGATATTTGC  95 48
CHC44_RS09625 NONE
CHC44_RS09620 1854437 .. 1854451 -  -4.2  -3.79113   ATCGGGCGACAATAA               CGCGTA TAA TAGGCG               AATCATGCTGTTACA  55 300
CHC44_RS09610 NONE
CHC44_RS09605 NONE
CHC44_RS09600 1847547 .. 1847559 -  -3.3  -5.27335   TGTGTCAAATAAAAA                GAGCA TAT TGCGC                GCGTTTTTTCCTCTG  79 278
CHC44_RS09590 1847232 .. 1847275 - -15.2  -4.23218   AATCATGAAAAAATA GGCGAGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG 100 50
        sifB 1840878 .. 1840892 -  -4.3  -2.76162   CAGGGGATTGTAAAT               CCATA CTATT TATGG               TGTGGTCAACTCTGG  47 31
CHC44_RS09555 1840314 .. 1840328 -  -2.8  -4.65168   ACCACATCTTAAAAA               TGCC CCAGCCC GGCA               GCGTTGTCGCTTCAG  67 91
CHC44_RS09540 1836065 .. 1836076 -  -5.8  -3.51232   CCGTCCCCAAACCAA                CGAC CCAG GTCG                 GGCAGCAAGTTCTTG  57 492
CHC44_RS09520 1832554 .. 1832567 -  -6.7   -3.2964   AAAGCGTGGCTACAA               CAGTC GCTC GACTG                GCCGCAATATGTCAC  61 440
CHC44_RS09510 NONE
CHC44_RS09505 NONE
CHC44_RS09500 NONE
CHC44_RS09495 NONE
CHC44_RS09490 NONE
CHC44_RS09485 NONE
CHC44_RS09480 NONE
     aac(6') 1826192 .. 1826212 - -15.5  -4.23674   CCCCAGTAATATAAA            GGTCGGGTA CTA TACCCGACC            TTTTCCTGTATGATT 100 45
CHC44_RS09445 1818068 .. 1818078 -  -4.6  -3.61398   GCTTCGCTTGAAGAA                 CAGG CTG CCCG                 CTTGACGCAAGCCGT  55 156
CHC44_RS09435 1816191 .. 1816206 -  -2.5  -2.71712   TTGGCGGCGTGAAAG              GGC-GC ACGCA GCTGCC              AGGGATGGTCGAAGA  39 128
        sseJ 1811771 .. 1811795 -  -4.1  -4.61199   ACGGTATAGACAAAA          CGGCGGCACGT AAA ACCTGGCGCAG          AGTGCCGGAATCCAC  69 333
CHC44_RS09405 1809953 .. 1809982 -  -4.3  -2.67143   ATAGCCAGCATATTA       CCTGATGACATAG CTTA CTATTTCATCCAG        CTATCGACAATGCCA  46 13
CHC44_RS09400 NONE
CHC44_RS09395 1808552 .. 1808571 -  -2.8  -2.79106   AAAGAAGAGAGACCA            GC-CAGCGA TCA TCGTTGTGC            CTCGCTAAAAAAACA  41 14
CHC44_RS09390 1807883 .. 1807895 -  -3.4  -2.64925   ATAGTGCAGTACAAC                TCAG TAACC CTGA                CCGTAATGGCGAAGC  42 13
CHC44_RS09385 1805770 .. 1805786 -    -3   -4.4078   GCGCTGGAATTAAAA              CAACGA AGCAA TCGTTA              GGCAAGCATTAATCA  60 435
CHC44_RS09380 1804891 .. 1804924 -  -6.7  -4.61199   ATTCCATACAGAAAA     CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG      AAGGAGGACGGGTCT  79 171
CHC44_RS09360 1798539 .. 1798557 -  -6.6  -3.14344   TATTTGCGCTACGAA             CCGGAGAC GTT GCCTCCCG             TCGAAACGGGAGGCA  54 48
CHC44_RS09335 1793574 .. 1793597 - -12.4  -4.13767   GGGGTTATCCGAAAA          TGCTCCCCTG AGCG CAGGGGAGCG           ACAGGATTAGAACAG 100 32
CHC44_RS09330 1792879 .. 1792896 -  -6.9   -2.8552   CGCCAGGGATGAAAG             CGGCGAT GTCC AGCGCCG              GCGAAGCGAATTGCG  56 212
CHC44_RS09320 NONE
        nifJ 1788918 .. 1788937 - -13.6  -3.50047   CGTATAAATTGACAA            GCCCGAAC GAAT GTTCGGGC             TTTTTTTGTTTCCAG 100 61
CHC44_RS09305 1787835 .. 1787845 -  -2.4  -2.75481   TCCCAATGCGAACCA                 TCCC TGC GGGT                 ATCATTTATGCTATT  39 237
CHC44_RS09285 1786344 .. 1786372 - -14.6  -2.66008   AAATGATCGATAGCA        TGGCGTCTCAGC GGAGT GCTGAGACGCCT        GCAGATTATTTCACT  89 31
CHC44_RS09250 1780424 .. 1780436 -  -4.8  -3.36175   AAGTGTGACCGATAA                GGCA CTTTT TGCC                TGTATATTCATAATA  54 33
CHC44_RS09245 1779413 .. 1779429 -  -2.2  -3.91352   ATATGGTGAATGAAA              CAGAGG AAGCG CTTCTG              CCAGATCAATAAATG  53 92
CHC44_RS09240 1778353 .. 1778388 -  -6.8  -2.85437   GAGTAACAGGAATGA    GGTATTGGCCGGATGGC AGC GCCATCCGG-CAGGACG    GAAGAGGGATTAATC  56 35
CHC44_RS09230 1776778 .. 1776812 - -14.5  -3.12668   CATCCGGACAGGGAA    GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC    TATCTTTTATTTTGT  89 32
CHC44_RS09220 1774975 .. 1774987 -  -4.7  -3.76837   CAGAGAACCGAATAA                CCGGC AAT GCAGG                GGCGCAGGCATTCTC  58 443
CHC44_RS09190 1769010 .. 1769022 -  -4.1  -3.92178   AGCATTTTAATTAAA                CGTTA TCT CAACG                AGATAAAAGGTTAGC  57 381
CHC44_RS09185 1767533 .. 1767559 -  -2.8  -2.82036   AGAGATTATTGAAAC         GCAGGGTAAGCC GGA GGTTGACACCGC         AACCGGAATGACGAA  41 342
CHC44_RS09170 1765870 .. 1765896 - -10.9  -3.04248   GAACAGCTTCTAACA         CGGTTGCCG GAGCGTAGA CGGCAACCG         TATGATATTCGCCTG  76 45
CHC44_RS09155 1762664 .. 1762698 -   -12  -3.20991   GTTAACGTAAGGTAA     CCACGCCCGCCGCCTG ATG CTGGCAGAAGGCATGG     GGATTAAGCGAGCGC  83 56
CHC44_RS09145 1759866 .. 1759878 -  -6.2  -3.58343   CGCAGTAGTCTGAAA                GCCC TGACG GGGC                GCTACGATATGATCA  57 248
CHC44_RS09135 1758457 .. 1758480 - -13.2  -5.70829   AAGAGTAGAAAAAAA          GAAGGCCTCC GGAT AGAGGCCTTC           TTGTGACAAAAGAGC 100 84
CHC44_RS09090 NONE
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 1745628 .. 1745650 -  -6.3  -3.14051   GCAGTCGCATGAACA           CCCTCAG AGAATCGAA CTGAGGG           TATTTGTTTCGCTTA  57 38
CHC44_RS09050 NONE
CHC44_RS09045 NONE
CHC44_RS09040 1741602 .. 1741618 -  -3.8  -3.49176   GAAAGGGATGAAAGA              TTGTTA GGTGA TAACAA              ATATCAGAACGCTAT  52 113
CHC44_RS09035 NONE
CHC44_RS09030 1738304 .. 1738330 - -14.5  -4.96427   GAAGAAGAAAAGAAA         CGGCCTTTGCC TTCTC AGCAAAGGCCG         TTGAGCGAGCTAAGC 100 45
CHC44_RS09025 1738107 .. 1738117 -  -2.4  -3.07113   TACCATCCCATTTAA                 GCGC CAG GTGC                 CCGAAAAGAAAGGTT  42 11
CHC44_RS09020 1736060 .. 1736070 -  -2.4  -4.00465   GAGAAGGGAAAAATA                 GGGC TAT GCCT                 GTCTGCACAGGCTGT  53 61
CHC44_RS09015 1735764 .. 1735791 -  -6.8  -2.94622   ACAGACAGTCAGAGA        GCCGGGAAGGGC TAAC GGCCATCCCGGA         CAAATAATCGCTATC  56 39
CHC44_RS09010 1734932 .. 1734953 -  -9.5  -2.72799   GTCTTAGAGAGAGGA           TGATTTGCC ATAG GGCAAACCA            TCGGGAAATATTTTA  69 38
CHC44_RS09005 1734376 .. 1734401 - -11.9   -4.4078   GGCGGCTAATGAAAA         CGCCACGGT TGTAAATT ACCGTGGCG          TAAAAGTCAACTTTG  95 113
CHC44_RS08990 1733024 .. 1733036 -  -9.1  -2.91395   ATCGTTGTCAGAAAT                GCGGT TTT ACCGC                CTATACCTTGTACTG  62 79
CHC44_RS08975 1731091 .. 1731103 -  -4.8  -3.63627   GTTCTACACTTTAAA                GCGT ACAGA ACGC                GGACATTTAGTGAAA  57 348
        ribA 1729484 .. 1729494 -  -8.2  -5.19212   ACCAGCAGGAAAAAA                 CGCC GCT GGCG                 GTAATTGCCGGGAAA 100 462
CHC44_RS24100 1724605 .. 1724619 -  -9.2  -2.72263   ATACGTTCCCGAAAT               CACGCG AAA CGCGCG               CGCCATTAGTCGAGG  60 199
CHC44_RS08925 1721255 .. 1721291 -  -4.3  -3.93026   AAGATCTCAACGAAA    CGCACCATCTGTTCAAA GAG TTTGTGCAGCGGATGCG    TCCGGCTCTGGACAT  60 320
CHC44_RS08915 NONE
        cobO 1718616 .. 1718638 - -10.4  -3.53091   ATCCCGCTGCCGAAA           GGCCTGCCGC GCG GCGGCTGGAC           TGAGCTCGACCTCGC  74 299
CHC44_RS08890 1716110 .. 1716128 - -10.2  -5.75342   TTTGTTCAAAAAAAA             GCCCGCTT AAC AGGCGGGC             CGGGTATCGTTTGGC 100 46
CHC44_RS08885 NONE
CHC44_RS08880 NONE
CHC44_RS08875 NONE
        trpB NONE
CHC44_RS08865 1709520 .. 1709542 - -12.7  -3.18912   CCAGCCACTCATTAA           GCCGCCAGC GTTAT GCTGACGGC           TTAACCCGTTATGCG  86 34
CHC44_RS08860 1708825 .. 1708846 - -12.3  -3.63744   CTCCTGGGCAAAATA           CTGCGAGCC AGAA GACTCGCAG            ATTGCTTGATAAAAG  95 68
CHC44_RS08855 NONE
CHC44_RS08850 NONE
CHC44_RS08845 1706761 .. 1706779 -   -16   -5.1861   GTTATGACGAAAAAA             GACCCCGC CAG GCGGGGTC             AAAAAAGGACATGAC 100 64
CHC44_RS08835 NONE
CHC44_RS08830 1704553 .. 1704568 -    -6  -2.80016   TTCCATCATCAACGA              GCGTCG AATG CGCCGC               GTAACGGCGCATTGC  53 44
CHC44_RS08825 1703946 .. 1703974 -  -4.5   -4.6971   TAAAGGCGAAGAAAA        TATCGCCAGGC GTTCGCA GTCTGGCGATG        ATAAGTCACGGGAGG  71 42
CHC44_RS08820 1703035 .. 1703046 -  -7.2   -3.6422   CACCGTTTGAAAATA                GCGC CCCG GCGC                 GGCCAACAAGCAGCA  65 408
CHC44_RS08810 1702092 .. 1702111 -   -15  -3.91897   TGTGTGAGCCAGAAA            GGGCACCG TATG CGGTGCCC             AACAGGCCATCCTTT 100 41
         cls NONE
CHC44_RS08795 1699664 .. 1699676 -  -4.8  -3.39803   TAGTGACAGTCACAA                CCGT GGGGT ACGG                TGATATTACGCCGCA  51 293
CHC44_RS08750 1688783 .. 1688800 - -12.7  -6.09196   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 54
CHC44_RS08740 1686900 .. 1686916 - -13.7  -5.81412   CTCAGGCAAAAAAAA              TCCCGCC AGC GGCGGGA              TTTTAAGCATCCAGG 100 48
CHC44_RS08720 NONE
        purU 1682085 .. 1682114 -   -10  -3.06261   GGGTAATGCTTAATA       CTGGCCCGCTTCC TTTCG GGAAGCGGGGC-G       CATCATATCAAATGA  73 136
CHC44_RS08710 1681961 .. 1681974 -  -5.3  -3.07816   TGCTCATCGAGTTAA               CTACA TCGA TGTAG                TGAATAATGGTGGTG  51 33
CHC44_RS08705 NONE
CHC44_RS08700 NONE
CHC44_RS08695 NONE
CHC44_RS08690 1680842 .. 1680865 -  -3.8  -3.80437   AAAAGCAGCAAAACA          GGATTTTGCG AAAG CGCAATATCA           GCTTGGCGTAGCATA  56 492
CHC44_RS08680 1679479 .. 1679494 - -10.4  -3.55444   TCTCGATGCCCTAAA              CTCCGC TTCG GCGGAG               TTTTTTTATGGCTGT  77 31
CHC44_RS08645 NONE
CHC44_RS08640 1667774 .. 1667785 -  -3.6  -4.56597   CGTGCCGCTCAAAAA                GCAG CTTG CCGC                 CAGTGAAGTGGCGCA  69 474
CHC44_RS08630 1666197 .. 1666221 -    -3  -5.55769   TGGCATAAGAAAAAA         TAA-ACGCG-GT ATT ACTCGCGTGTTA         GCCTGATTTTCTTGC  83 83
CHC44_RS08620 1664471 .. 1664491 -  -7.5  -3.53012   CTGCCGCTGGCGAAA            CTGGAGCAG TTC CTGACCCAG            ATAAAAGCGATTGAT  62 136
        lolB NONE
CHC44_RS08580 1657311 .. 1657325 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAGCTCAGCTTGCC  78 160
CHC44_RS08575 1656215 .. 1656228 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TTTCAGATCCGGGTT 100 44
CHC44_RS08570 1654357 .. 1654372 -  -3.2  -3.99324   CGTCACTATGACAAA              CGTTGC CGCC GTAACG               ACAATCGTCGTCATA  55 90
CHC44_RS08560 1653222 .. 1653249 -  -9.8  -2.94099   TTCGCCTATTATACA        CGGCGTGCGGCA AAAA TGCCGCACATCA         CTGGTTATTGCGCCT  70 30
CHC44_RS08555 1651966 .. 1651983 - -11.3  -5.68438   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGACTTTCTT 100 88
CHC44_RS08545 NONE
CHC44_RS08540 NONE
        cybH NONE
        hybD NONE
CHC44_RS08525 NONE
CHC44_RS08520 1644603 .. 1644620 -  -6.3  -2.86773   GTAAAAAGCTAATCA             GT-ACCGG ACA CCGGTGAC             GTTCCTGTTGAGAGC  55 42
CHC44_RS08515 NONE
        cydB NONE
CHC44_RS08505 1641730 .. 1641761 -  -6.5  -5.24799   GTATAAAGATAAAAA      TAACCGGAGTCAG ACGGCG CTGGCCCCGGTTT       ACCTCTTTATTGTTG  87 32
CHC44_RS08500 1640058 .. 1640075 -  -7.7   -5.4492   TATACAGACAAAAAA             TCCACGC CGGG ACGTGGA              TTTTAGCGCAATAAC  95 49
        treA 1638123 .. 1638162 -  -2.2  -3.05522   TAACCGCTGCAAAAC GTGTAAGCGTTGACCCGG TCAGCG CCGGGTCAAC-C-TACTA  TAAACACGCGTTACT  42 36
        ycgR 1636463 .. 1636473 -  -8.2  -4.68593   CCCATCAGTGAAAAA                 GCCG GGG CGGC                 ATGGGGGGTTGATCC  90 505
CHC44_RS08475 NONE
CHC44_RS08470 1633345 .. 1633365 -  -6.1  -3.28712   TGCCGTTTGTGACAA            CGTAACCTG ACT CAGGCTAAG            GCGTCGACCGGTCCA  59 72
CHC44_RS08455 1628853 .. 1628865 -  -4.8  -3.76492   CTGAACGGCATGAAA                GGGT TATAC ACCC                GCATTGGTCGCCACT  55 272
        nhaB 1626549 .. 1626579 -  -2.5  -4.68994   ATTATCAGGCAAAAA      TCGGAGCCGGGC GGTGTATT GCCCGGC-CAAA       CGTTACGAAAGCGTT  65 28
CHC44_RS08440 1625888 .. 1625903 - -10.4  -5.75342   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC 100 32
CHC44_RS08435 1625044 .. 1625072 -  -7.5  -3.39895   TGTGCTATTAACCAA       CCGCCTGATGCAC CGTCT GTGC--CAGGCGG       TTTTTTACATCTTTC  63 413
CHC44_RS08405 1622164 .. 1622176 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CTGTCAAAGCGTTGT  54 9
        minD NONE
CHC44_RS08395 1620998 .. 1621027 - -15.3  -5.57054   AATAATGTAAAAAAA       TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA        ATCCAGGAATTTTCC 100 52
CHC44_RS08380 1617461 .. 1617484 -  -3.1  -4.36914   TGTGGCGGTACAAAA          TC-AGCAGGG AAAAA CCCGGCTTGA          AATCGCGACCGTACC  62 362
CHC44_RS08360 1613901 .. 1613913 -  -2.6  -3.73647   CTCAGTCATGAACAA                CAGC AAAAA GCCG                TAGAACGTATCCAGG  50 162
        pabB NONE
CHC44_RS08345 1611646 .. 1611659 -  -2.3  -3.19026   TAGTGTAAGAGGGAA               CGCTG GCAT CAGCT                TAACTATTCACATGA  44 204
CHC44_RS08340 1610165 .. 1610193 - -13.9  -5.10968   AGGAAGAGATAAAAA        TTTCGCCCATCCG TAG CAGATGGGCGAAG        GGAGGGGAAACGGCG 100 42
CHC44_RS08335 1608023 .. 1608039 -  -3.7  -2.71791   AGTGGTGCCGGAAAC              GCTTGAT CCT ATCAATC              TGTTAGGCGTTTTGC  43 457
CHC44_RS08320 NONE
CHC44_RS08315 NONE
CHC44_RS08310 1603698 .. 1603715 - -14.1  -5.76237   CAGAGAAATAAAAAA             CGGGGCC GTTT GGCCCCG              GTAGTGTACAACAGC 100 42
CHC44_RS08305 1603150 .. 1603165 -  -6.2  -4.66537   TTGGTCAATAGAAAA              TATAGC CTTA GCTATA               TTATGATTCGAAATA  78 76
CHC44_RS08295 1602175 .. 1602185 -  -6.8  -3.62522   GAAGTGTGGGAACAA                 CTGG CTG CCAG                 CGCCGGACTTAGCTG  62 80
CHC44_RS08260 1597310 .. 1597332 -  -9.2  -5.78622   TGACGTTAAAAAAAA           GCAGCTAC GAAAAAT GTAGCTGC           TTTTTTTATAACATC 100 184
CHC44_RS08250 1594916 .. 1594933 - -12.7   -4.3534   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 31
CHC44_RS08225 NONE
CHC44_RS08220 1586421 .. 1586446 - -12.5  -4.46926   CAGTGTAGCATAAAA         CGCTCCGGCGC GAGT ACGCCGGAGCC          GGGTGTTTAACGTGG 100 32
CHC44_RS08215 NONE
CHC44_RS08210 1584555 .. 1584570 -  -8.2  -4.34486   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  79 37
CHC44_RS08205 1584261 .. 1584273 -  -3.3  -3.31905   AGCGCGGATACAATA                GCGGT ATC AGCGC                CCAGGGTTAAAAATC  48 32
CHC44_RS08185 1581142 .. 1581154 -  -3.3  -3.53012   CCCTGGCTTGTTAAA                GCGGC ATG ACCAC                ATTTTCTATATATAA  50 8
CHC44_RS08180 1580151 .. 1580166 -  -7.5  -2.92091   AGAGGTACTCAGACA              GCCGC TTGTAG GCGGC               ATGGTACGGATACAA  59 191
CHC44_RS08165 NONE
CHC44_RS08160 1578583 .. 1578600 -  -2.6  -4.13767   GGTCGCATTTCAAAA             CTGCAG GAACAT CTGCTG              AATACTGTATACTCC  56 2
CHC44_RS08150 1576479 .. 1576497 -  -4.6  -3.49076   AAAAGTGATAACTAA             TTGAATCT ATT AGAATCAA             AAATAACATATTCCA  54 259
CHC44_RS08140 NONE
CHC44_RS08135 1574239 .. 1574249 -  -5.4  -4.10925   ACACACTCCTTAAAA                 TGAC AAA GTCA                 GCGAATTGGTCATAT  65 9
CHC44_RS08130 1573267 .. 1573283 -  -2.2  -4.52857   ACGCTGTACAGAAAA              TTCCCT GTGTT AGGGTA              ATGCAGTATTTCCAC  61 351
CHC44_RS08110 1571884 .. 1571898 -  -4.4  -4.45517   AAACCATTTATAAAA               TATTTA ACT TAAATA               AAAATGATAAGCACT  69 86
CHC44_RS08105 1571247 .. 1571263 - -13.7  -3.29096   TGGATGAATGATGAA              GCTGCGG AGG CCGCAGC              CAGACTTCGTGAAGC 100 330
CHC44_RS08090 NONE
CHC44_RS08085 1569426 .. 1569455 -  -7.9  -3.99985   GAGAGAGTCAAATAA       TTACAGGAGGCAT TGAA ACTCCCCCTGTAA        TATTGCTGTAAAAAA  72 268
CHC44_RS08070 1567917 .. 1567927 -  -8.2  -2.77013   TAGCTTTTCAATAAG                 CGCC ACT GGCG                 TGTGGTTTTGCGCTA  60 38
CHC44_RS24090 1566672 .. 1566699 - -11.4  -5.45652   ATTTTTAATAAAAAA        CCGTAAACCTTC ACGA AAAGGCTTACGG         TTTTTTTATCTCTGA 100 352
CHC44_RS08040 NONE
CHC44_RS08035 NONE
CHC44_RS08030 1563000 .. 1563013 -  -2.3  -4.66609   TACGCGAGCTAAAAA               CGGAC CAAC GTCTG                CTGCTGTTATGTACG  65 191
CHC44_RS08005 1558074 .. 1558111 -  -6.4  -4.83615   CAGGTCTGATAAAAA  TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT   TTTACCGTCACGCGG  80 19
CHC44_RS07985 NONE
CHC44_RS07980 1552492 .. 1552504 -  -3.4  -4.25104   CTCCGTTGACTAAAA                CAAC TTGGT GTTG                CGTGAACATTGATCC  60 115
         pyk 1550957 .. 1550982 - -14.9  -4.49958   ATCCCATCAAATAAA         TAAAGCCTCTC GTAA GAGAGGCTTTA          TGCTGACAAACCCTG 100 71
CHC44_RS07965 1549563 .. 1549575 -  -3.3  -2.71712   TCGTGGTCGCTAAAC                GTAGC GGC GCTGC                TGGTTACTACATTGC  43 208
CHC44_RS07950 NONE
CHC44_RS07945 1545596 .. 1545628 -  -5.6  -2.73364   CGCCGAGGTGAAGCA     TGACGGGGCTATTTC AGCG GAAATTGCCGCG-CA      GGCGCTGGATATGCT  47 369
CHC44_RS07925 1542010 .. 1542030 -  -6.1  -3.81488   CCGCTGGAAACAGAA            TCCGTTCAC GAT ATGATCGGA            TTGCTGCGTAATGTG  63 416
CHC44_RS07895 NONE
CHC44_RS07890 NONE
CHC44_RS07885 1534970 .. 1534986 -  -3.6  -4.85782   TCCGGGAAAAATAAA              GGCGCA TATTG TGCGCT              AATACAGGGAGAAAA  69 24
CHC44_RS07880 NONE
CHC44_RS07875 NONE
CHC44_RS07855 1529640 .. 1529668 - -14.6  -5.06414   CTGTGGCAATAAAAA        GGCCTGAGTCCG TTACC CGGAGTCAGGCC        TGATGATGTTAACGA 100 49
        mrdA 1527428 .. 1527443 -  -6.8  -2.56838   GATAGTGAAACATAT              CTCGCC GGAA GGCGAA               CTGCTGCAAACGTCA  51 214
CHC44_RS07770 NONE
CHC44_RS07765 1510724 .. 1510758 -  -5.7  -3.53761   TAAGCTGGCCTGAAA    TATCGCGAGC-GGCGA CTAG TCGCCCGCTAACGGTA     CCAACAACACATCTA  57 6
CHC44_RS07745 1505974 .. 1505994 -    -4  -4.58395   TTCATCTTTGAAAAA            GCGTTTAC CGGGC GTAAAGGC            GAGGGGTATCCGCCT  69 426
CHC44_RS07735 1504910 .. 1504929 -   -10  -4.35747   TAAAAATAAAGGAAA            GCCAGCAC CTTC ATGCTGGC             AATAGCGACCCTGCA  87 83
CHC44_RS07730 1504055 .. 1504070 -    -6  -4.63932   GAGGCGGCAATAAAA              GCGCGC TTTG GCGAGC               GGGCACGATTTCACA  75 205
CHC44_RS07720 1502434 .. 1502447 -  -3.8  -3.52177   CGGCAAAAAATTTAA               GCAG TGCTGC CTGC                ATTAATGGTTCGTAA  52 105
CHC44_RS07665 NONE
CHC44_RS07660 1494512 .. 1494538 - -12.2  -3.63627   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC  89 33
CHC44_RS07610 NONE
        fliS NONE
CHC44_RS07600 1483177 .. 1483190 -  -3.8  -3.28712   TTCCGTGCTCCAGAA               GTCG TTTAGC CGAC                CTCTGGAGTATGGAA  50 67
CHC44_RS07595 1481611 .. 1481624 -  -5.9  -5.24129   CCGCGTTAGAAAAAA               CGCCG CTGC CGACG                CCGCTGCCGTAATTT  83 77
CHC44_RS07585 NONE
CHC44_RS07580 1479568 .. 1479596 -  -9.5  -3.05597   GTTATGCCGTAAAAG        GTCTCCCGCCGTA ACG TACAGCGGGAGTA        TGCGCTTATTTTTGA  71 31
CHC44_RS07575 1478861 .. 1478894 -  -7.3  -3.06183   CCCATCCGCAGCGAA     CTCCCGGGCGCTTAC CTAA GTCAGCGGCGGGGAA      CGCGACGCCCATGCA  60 82
CHC44_RS07565 NONE
CHC44_RS07560 NONE
CHC44_RS07555 NONE
        fliI NONE
        fliJ NONE
CHC44_RS07540 1471843 .. 1471857 -  -2.8  -3.96148   CCTGTCCACGACAAA               GCGT GGAAAAG ACGC               GGATAATCATGCTAC  54 49
CHC44_RS07535 NONE
CHC44_RS07530 NONE
CHC44_RS07525 NONE
CHC44_RS07520 1469508 .. 1469531 -  -2.2  -2.56982   AAGGAATAACAAACG          GCGCATCAGG ATCT CCCGGAACGC           TTGAGTAAGCTCTTC  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
CHC44_RS07500 1466587 .. 1466609 - -16.2  -4.14392   GGGTAACCGTTAAAA           CGGACGGCGG TCC CCGCCGACCG           GGCGTGGTACTGGCA 100 205
CHC44_RS07490 1466005 .. 1466016 -  -2.2  -2.80816   CTTCCAGGCAGCACA                TGCG TTGT CACA                 CTTTTGCTACCGAAC  40 209
CHC44_RS07485 1464629 .. 1464660 -  -2.8  -4.56597   GCGCTGTTTGAAAAA      GCGTCCAGGCTG-GC AAA GCGCTACCGGGAAGC      CCGCCAGCCATTTTC  67 440
CHC44_RS07465 1460898 .. 1460934 - -12.4  -3.02144   GGAGCGCCTGGAAGA   GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC   ACCCAGGGGATTCAT  76 41
       ompS1 1456033 .. 1456057 - -20.1  -3.78934   CTTGCCCTATAATAA          CAAGCCCGTGC TAA GCACGGGCTTG          AATAACATAAAGCGT 100 42
CHC44_RS07400 1451675 .. 1451687 -  -5.5   -3.3482   CAATTGGTTAATTAA                CCCAC AAA GTGAG                GAATTAATGTTCGGA  56 29
CHC44_RS07395 1451478 .. 1451507 - -13.7  -2.73529   GTTGATATAAATGCA       GAAAGCAGACGTC AGTG AACGTCTGCTTCC        CTAAATTTGGCTCCT  86 33
CHC44_RS07390 1450707 .. 1450719 -  -4.1  -4.82901   GTTTGCTGACAAAAA                CAACA AAG CGTTG                AAGTTTTGATCTAAT  71 335
CHC44_RS07385 1450454 .. 1450481 -  -6.2  -5.05782   ATGGATGTCAAAAAA        CCCGGCAAACCT TATC AGATCAACCGGG         TAAAGATAATTTCTT  83 89
CHC44_RS07380 1449759 .. 1449780 -  -5.1  -2.67803   GCGCGACGAAAGTGA           CGCACCGG TTGAGTG CCGG-GCG           CGAAAGATCGCGGAT  48 153
CHC44_RS07360 NONE
CHC44_RS07355 1443957 .. 1443974 -  -6.9  -3.54543   ACGCACGTCGGTAAA             GCGCACC AGCC GGTGCTC              GCAGTTCCATTCAAA  62 488
CHC44_RS07335 1441714 .. 1441724 -    -4  -4.25056   GATCTCATGAATAAA                 TTCT TCG AGAA                 ACTCAATGTCGAGCG  64 174
CHC44_RS07320 1440553 .. 1440570 -  -5.5  -4.07568   CTTTTTTTGTGAAAA             CAGGCTT TGAC AAGCCAG              GGGCACCTCGTTAAT  65 141
CHC44_RS07305 1438682 .. 1438709 -   -12  -5.14965   ATGGGTATCAAAAAA        CCCGGTAAACCT TATC AGGTCAACCGGG         TAAAGATAAGTTCTT 100 89
        pduA NONE
CHC44_RS07180 NONE
        pduC NONE
        pduD 1414541 .. 1414551 -  -8.2  -3.73224   TTATCCTTTATCAAA                 GCGC CAC GCGC                 AGTTCCTGCGGGTTT  71 10
CHC44_RS07165 NONE
CHC44_RS07160 NONE
CHC44_RS07155 NONE
        pduA NONE
CHC44_RS07145 NONE
CHC44_RS07140 1410380 .. 1410406 -  -2.1  -2.57463   AATCTCCTCGACAAT         GCGCTGCAGGG TTTCG CCGTTCATCGC         GGGCCTACCAGCCGG  39 19
CHC44_RS07135 NONE
CHC44_RS07130 NONE
CHC44_RS07125 NONE
CHC44_RS07120 NONE
CHC44_RS07115 NONE
CHC44_RS07110 NONE
CHC44_RS07105 NONE
        pduU NONE
        eutP NONE
CHC44_RS07090 NONE
CHC44_RS07085 1401062 .. 1401078 -    -3  -4.30576   TCGCCAGCATGAAAA             GCGA-CT ATGA AGATCGC              GTTGATGATTACATC  62 170
        sopA 1390874 .. 1390893 - -12.2  -2.91264   GGGTCTATGTACAGA            GGGACACA ACGC TGTGTCCC             TTAATTCCATGCGGG  80 52
CHC44_RS07030 1389015 .. 1389033 -   -16   -4.4261   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTCTGTCAT 100 115
CHC44_RS07010 1385255 .. 1385281 - -22.4  -6.06723   CGCGCCAAAAAAAAA         GCCCCCGGAAGA TGA TCTTCCGGGGGC         TTTCTCATGCGTTCA 100 66
CHC44_RS07005 NONE
        hisD NONE
CHC44_RS06995 NONE
CHC44_RS06990 1380741 .. 1380755 -    -5  -2.71011   AGCCGGTGTCAAGGA               TGACGA CGT TCATCA               CAGCACTCCTTTCGA  49 23
        hisH NONE
        hisA NONE
        hisF NONE
CHC44_RS06970 1378037 .. 1378051 - -12.8  -5.14563   TTTCTCATTAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 37
CHC44_RS06805 1340356 .. 1340367 -  -2.2  -4.59511   AATACGGCGGAAAAA                TGCA ATGC CGCA                 GAGCAATTTATCTTT  64 301
CHC44_RS06800 1338636 .. 1338674 -  -7.4  -3.34398   GTTTTTGGCCAAAGA  GGAGTGCCGGATGGCGAG GCTAA CGCGCC-TCCGGC-CTGC  CTGGTAAGCAGGCCG  63 58
CHC44_RS06780 1331834 .. 1331851 -  -4.8  -4.07687   ACGCTGGCGGGAAAA             CTGGCGC TCGCC GCGCC-G             CCGGATATTGAGCAG  62 266
CHC44_RS06765 1329573 .. 1329592 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTCC CGAG GAAGGGGC             CAAAATAAGGAAAGG  91 202
CHC44_RS06760 1328081 .. 1328091 -  -6.8  -3.08679   TGCCCGGAGGTAATA                 CCTG CAT CAGG                 CGCGCGCTCCTTTTT  58 21
CHC44_RS06755 1324959 .. 1324970 -  -3.6  -4.66264   GAAAAGGGCGAAAAA                GCGC ATCT ACGC                 CTCCTCTTTATGGCG  66 20
CHC44_RS06750 NONE
CHC44_RS06745 NONE
CHC44_RS06740 NONE
CHC44_RS06735 1317954 .. 1317967 -  -5.3  -4.98857   ATCCAACGATAAAAA               TGGTT GCTT AACCA                GCGCTGGATAATTTC  77 411
CHC44_RS06725 NONE
CHC44_RS06720 NONE
CHC44_RS06715 1313989 .. 1314005 -  -2.9  -2.78384   GGCGGCTTGAGGAGA              GTCCTCA CTT TAAGGGC              GGGCATTGTAGCGCC  41 64
CHC44_RS06710 1312405 .. 1312430 - -13.4  -4.65666   ATACGCAAAAAATAA         GCCTGCGTAA GGGAGA TTACGCAGGC          CAAGGAGGTGGTTCC 100 162
CHC44_RS06705 1311059 .. 1311074 -    -4  -4.25256   GGGTGAGTAAAACAA              GGCAAT CATG ATTACC               TCCAAGAACTGGCAG  62 21
        yegS 1308663 .. 1308684 - -11.6  -4.78572   GTTCAACGAAGAAAA           GCCGGATG TGAGCG CATCCGGC            CAGCGACTGGTGTTA 100 41
CHC44_RS06680 NONE
CHC44_RS06675 NONE
CHC44_RS06670 1304023 .. 1304072 -  -8.6  -3.62864   CAAATGGATGGTAAA GTGCCGGTGCTGGTGATTAAGCA GGTGG CGCTCGATCAGCAGCAGCGGC-C TATTGAATACAGCAT  68 60
CHC44_RS06650 1300829 .. 1300860 - -12.4   -2.6175   GATAGGTGAATGAAC      TTCCGGTCACTTAC AATA ATAAGTGACCGGGA       TGACAATCTTTCTGC  81 208
        metG 1291816 .. 1291833 - -12.7  -5.03145   TAAGCGGTTAAAAAA             GCCGGAG CATG CTCCGGC              TTGTTGCTTATTTCA 100 33
CHC44_RS06610 1291079 .. 1291098 - -11.4  -5.01553   AATTCATAAAGAAAA            GACGCTGC CGAA GCAGCGCC             CTGAGCGACTTTACC 100 69
CHC44_RS06605 1290131 .. 1290146 -    -4  -3.37685   AAAACGCGGCAAAGA              TG-AGGC GGC GCCTGCA              TTGACGGCGGAACGT  49 319
CHC44_RS06585 NONE
CHC44_RS06580 1286183 .. 1286196 -  -2.4  -2.50016   GGTGATTATCAATAT               TGGT ACGGCG ACCA                TCGCTTCAACGGTGG  38 176
CHC44_RS06550 1278029 .. 1278045 -  -6.5   -5.2197   TATAAAAAGCAAAAA              GCCGC GCAAATG GCGGC              AGCCAGCGCCAGTGC  91 126
CHC44_RS06530 1275613 .. 1275656 -  -5.8  -4.72188   TCAACGCAAAATAAA CGCCGGGTGCCGGATGGC GGCGTTAT GCCATCCGGATACCATCG GGTTTAACGGGCCTC  74 29
CHC44_RS06515 1272908 .. 1272944 - -10.8  -3.30771   CTACAGCGTCCAGAA    CGTGTGCCGGGCAG ATACTATCA CTGCCCGGCGCAGG    AATCAGAAAATCATC  80 28
CHC44_RS06480 1265728 .. 1265738 -  -2.6  -3.55447   GGATTCATCATACAA                 TTAA ACG TTAA                 AACGTGCTACCGATC  48 110
CHC44_RS06475 NONE
CHC44_RS06470 1264557 .. 1264573 -    -3  -5.01042   AACTTAAATGAAAAA             TGCGCGA CGTA TCGC-CA              ATTTTAACCCGGTCT  70 53
CHC44_RS06465 1263531 .. 1263544 -  -8.1  -3.30243   AGTCAGGCCGGATAA               GACGC CAGT GCGTC                GCTATCCGGCACATT  65 44
CHC44_RS06460 NONE
CHC44_RS06455 1262258 .. 1262270 -  -2.6  -3.70505   TAAATTAAGGCGAAA                CGCA AATAA CGCG                TTTTAATGATCTAAA  50 180
CHC44_RS06450 NONE
CHC44_RS06445 1259709 .. 1259735 -   -13  -3.54475   TTGCTTATCAGATAA        CCCGGCGCAGC GAAACT GC-GCGCCGGG         CTTCATACCGCGAGC 100 40
CHC44_RS06410 NONE
        fghA 1250959 .. 1250977 -  -5.2  -3.77553   CAATACGATGAATAA             CGACGAGA TTA TCCTGTCG             TTGTGCGCCCGCTTA  61 362
        serB 1248470 .. 1248481 -    -3  -2.59431   TCGCGTTATAATTCA                TCTT CAAT AAGA                 AAAAGAAGCAATTCG  40 4
CHC44_RS06385 1247068 .. 1247100 - -19.2  -2.98823   CGTTTCTGACAGAGA      CTGGCGACAGCCGC GTTTT GCCGCTGTCGCCAG      AATGCTATAACCGAT 100 30
CHC44_RS06375 1244866 .. 1244876 -    -4  -3.31931   TGACATAATTATTAA                 CAAT TAA ATTG                 ATAATTATTATCGTT  50 56
CHC44_RS06360 1240993 .. 1241005 -  -4.1  -3.21218   ACGGTTCATTACGAA                CGCTA TGA TAACG                GGTTAACAGGCGTGA  48 52
CHC44_RS06355 1240040 .. 1240077 - -12.9  -3.73486   GGCATAAGAGAAACA   CGCTAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTATTG    CCTGAAGAACATTGA 100 44
CHC44_RS06335 1234415 .. 1234435 -  -2.6  -4.83615   TAGCGTGCATAAAAA            TATGTTAC AAACG GAAACATA            TGCAAAGCTATCCTT  72 298
CHC44_RS06315 1232932 .. 1232961 -  -2.8  -4.11773   AAATATCGCGTAAAA       CTACTCGCGCCGG GCCGT CCAG-GCAAGTGG       AATTGTCACTTTTGC  56 86
CHC44_RS06310 1232273 .. 1232287 -  -5.6  -5.10665   AGTCAATAAATAAAA               GGGGCA GAC TGCGCC               CTGGGGCGCAGCCGA  80 53
CHC44_RS06305 NONE
CHC44_RS06300 1230317 .. 1230352 - -13.6  -4.01853   GAATATCATCATAAA    TTACCTTCAACGAT-GT AAA ACTATCGCTGAAGGTAA    TGTTAATTACATAGG 100 41
CHC44_RS06290 1229313 .. 1229330 - -11.3  -4.59414   GGATAATAAGCAAAA             GCACTGC TGAA GCAGTGC              TTTTTATGTCGTCTC 100 77
CHC44_RS06285 1229059 .. 1229077 -  -3.8  -3.40403   CGCGTGTTAGCATAA             TTCCTGGT GTG ACCTGAAA             AGGCGGATGCCGGTT  50 73
CHC44_RS06280 1227458 .. 1227470 -  -3.3  -2.96444   TCGCTGAATAATAAG                TGACG TTG CGTCT                GATGTGAATCCGTTA  44 55
CHC44_RS06275 NONE
CHC44_RS06270 NONE
CHC44_RS06265 NONE
CHC44_RS06260 1221618 .. 1221631 -  -4.5  -4.09864   ACCGATTCCGCAAAA               CGG-GC AGA GCACCG               AGAATAGTCTGGTGG  62 262
CHC44_RS06240 1217199 .. 1217228 -  -4.9  -3.61517   ATCTCTCTTTAATAA       TTCCTGCTACAGG CGAC CCAGCAACAGGTA        AGTGATCTGCTTTGC  57 101
CHC44_RS06235 1216857 .. 1216872 - -11.8  -5.33866   TAAACGCATAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 48
CHC44_RS06220 NONE
CHC44_RS06215 NONE
CHC44_RS06210 1212749 .. 1212766 -  -9.1  -5.76633   GGATATATAAAAAAA             CCAGCCC TGGC AGGCTGG              CTTTTAAGGGGAATT 100 42
CHC44_RS06175 1207786 .. 1207798 -  -3.3  -3.92075   ATTGTTAGCGACAAA                GGCGT GGT AGGCC                GTTTACCTTACCAGA  55 73
CHC44_RS06160 1205403 .. 1205413 -  -8.2  -4.11216   TCTGGACCCGGAAAA                 CCGC GAT GCGG                 CGCTGGGCTACGCGG  77 326
CHC44_RS24075 1198092 .. 1198102 -  -4.6  -2.87051   GCTGGATGAGCAAAG                 CCCG GCG CAGG                 TCACTCACCGCGACT  48 30
CHC44_RS06080 1192063 .. 1192073 -  -4.6  -5.49809   GAAAGGGCAAAAAAA                 GCGC ATT GCAC                 TGCTGCTGGCGCTGG  93 468
CHC44_RS06050 1185894 .. 1185915 -  -3.5  -3.14878   CCGGGCAACTTAACA           CGCGCTCCG TCGG CGGGACGGG            AAAAGCGTACAACCT  46 116
CHC44_RS06045 NONE
CHC44_RS06040 1182359 .. 1182387 -  -6.6  -5.24129   CGCGGGCATAAAAAA       TGCCGGA-TGGCG GCGT CGCCTGTCCGGCC        TGCAAAAGATGAGTC  87 95
CHC44_RS06025 1175941 .. 1175952 -  -4.4  -3.61398   TTTCCCGTTCAACAA                CGAT TCCA ATCG                 CCACTGGCGAGCGTT  52 517
CHC44_RS06010 NONE
CHC44_RS06005 1171967 .. 1171977 -    -4  -6.24157   ATTCATAAAAAAAAA                 TCAA AAT TTGA                 TCGAATGCTGATTTC 100 105
CHC44_RS06000 1169394 .. 1169411 -  -3.4  -2.71144   TAGGCCGGGTAAGCA             TAGCGC TACCCG GCACTA              TTCATCAGATCTTAC  43 30
CHC44_RS05995 NONE
CHC44_RS05990 1167445 .. 1167456 -  -5.8  -3.06183   GTGAGCTGGATTTAA                TGGC GGCG GCCA                 GTAATTTCCTGCTGT  52 488
CHC44_RS05980 1165594 .. 1165630 -  -9.4  -2.54523   CCATAGTCGAAGTGA   CGCGCCGGATGAGGGCA TAAA CGCC-TCATCCGGCCTG    GCGCAACGTTTGCCA  68 82
CHC44_RS05965 NONE
CHC44_RS05960 NONE
        glpC 1158591 .. 1158608 -  -3.5  -3.86524   ATATTGCTCTATAAA             CAG-TAAC GTC GTTATCTG             TCATGCCACCGTGGG  55 218
CHC44_RS05950 NONE
        sseL 1157068 .. 1157079 -  -5.8  -4.88067   AGTTATTGAGAAAAA                TGCC GGAT GGCA                 CGTATGCCTTACGCA  83 299
CHC44_RS05905 1150055 .. 1150074 -  -9.3  -3.76413   TGTTAAAAGCGTAAA            GACAGCC TGAAGC GGCTGTC             GTCATTATAATAACC  77 30
CHC44_RS05895 NONE
CHC44_RS05890 NONE
CHC44_RS05885 NONE
CHC44_RS05880 NONE
CHC44_RS05875 NONE
CHC44_RS05870 NONE
CHC44_RS05865 1141365 .. 1141388 -  -2.3  -4.78149   GTCAGAACTGAAAAA          CGGAGGGAT TAAAAT ATCTCGCCG           TGCGCTCCAGCAGTG  68 415
CHC44_RS05815 NONE
CHC44_RS05810 1131417 .. 1131455 -   -11  -3.14132   GGCTTGTCTCACTAA   GCGTCAGGGGATGCCT GTACTGT AGGCATCCCCTGTTAC   GTCAGGCGCTTTTGC  78 27
CHC44_RS05720 1110089 .. 1110112 -   -14  -3.20348   CGGATGAAGATGCAA          TTCAGGCTAC CGAA GTAGCCTGAA           TTTAAGATTATTGAT  93 33
CHC44_RS05715 1109406 .. 1109433 -  -8.4  -2.57931   GGTAGGCCGGATAAG        GCGTTAGCCGCC ATCC GGCAACTAAAGC         GGTGAATCCTGGCTT  63 19
CHC44_RS05690 1104157 .. 1104184 - -16.4  -4.37886   GGACGGGTTACAAAA        CAGCACCGCCAGC GAG GCTGGCGGTG-TG        AAATCAGGCAGTCAG 100 29
CHC44_RS05685 1101931 .. 1101942 -  -7.2  -3.30124   CTGTAGGCCGGACAA                GGCG TTCA CGCC                 GCCATCCGGCATTAG  63 50
CHC44_RS05680 1099972 .. 1099988 -  -5.7  -5.03715   ACTACGCGGAAAAAA              CGCGGCG TAT CGTCACG              TGTGAAAACCACAGC  84 266
CHC44_RS05650 NONE
CHC44_RS05645 1094882 .. 1094896 -  -4.2  -4.66833   CCGCAACGCCAAAAA               CGAAGC CGC GCTCCA               GGAGAAACCGGAAGA  71 56
CHC44_RS05625 1092149 .. 1092165 -  -5.1   -2.6381   AGAATCTGCATATGA              CCTCC AGAGTAG GGAGG              ATTTCCTCTTCCCTA  48 130
CHC44_RS05620 1091205 .. 1091230 -  -8.9  -4.54026   GCTGAAATAAAAGAA         GCCCGGC-GGCG CAT CGCTTACCGGGC         AGGATACGGCGCTTT  88 46
CHC44_RS05560 1078990 .. 1079005 -  -3.2  -3.48474   GAAATGCATAACGAA              GGCTAA TGGC TTTGCC               AGCGGCGCGATGCCG  50 51
CHC44_RS05510 1068547 .. 1068568 - -14.5  -3.54424   GTGGAGGTTGTGAAA           CGCGTACCT GCAC AGGTACGCG            GTACGGCGCTCGGCG  95 192
CHC44_RS05495 1066437 .. 1066456 -  -3.6  -4.63218   TTCCTGTTAATAAAA            TACGTAAT AGCA ATGACGTA             ATGCTTTAACAGTAT  66 154
CHC44_RS05490 NONE
CHC44_RS05485 1065466 .. 1065481 -  -2.6  -3.42256   AGCGACGGAATAAGA              GCCTGAT GAA AT-AGGC              GCTTTAACCTCTCCG  46 74
CHC44_RS05470 1061202 .. 1061235 - -10.4  -2.92668   AAAGTCTGGAGAAAG    CGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCA     GGCGTTAGTCAAAGC  68 125
CHC44_RS05435 1055993 .. 1056004 -  -7.2  -3.30124   TCGTAGGCTGGATAA                GGCG CTTG CGCC                 GCCATCCGGCAATTC  63 45
CHC44_RS05410 1049590 .. 1049608 - -10.3  -5.33405   GGCAGTAAATAAAAA             GGTGAGC GCAAT GCTCACC             TTTTTGATCCGTTTC 100 50
CHC44_RS05400 NONE
CHC44_RS05395 1047004 .. 1047035 -  -8.9  -3.55761   CAGCGACTGGGTAAA      TGCGCATGATAATG ACGAA CACTA-CATGCGCA      AACTTACCTTCCGTG  68 427
        pgtP 1039769 .. 1039787 -   -16  -3.11072   GTCAGCGAATAGATA             GCGCCGAC AAT GTCGGCGC             TTCTGTTCCCCGGGA 100 52
CHC44_RS05350 1037839 .. 1037850 -  -7.2  -5.10163   AATGCCAAAATAAAA                GGCC TTGC GGCC                 TTTTTCAGATGTAGA  86 30
        ypdK 1037341 .. 1037360 - -13.6  -4.28487   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 43
CHC44_RS05330 1032676 .. 1032731 - -11.3  -3.61398   CCTGCTGCTCAACAA TGACGGTTATACCG-TAGAGCGCGCCA TTCA CGGCGCGGCCCAGCGGTATAAC-GACA TCGCGAGCTGGAACT  87 263
CHC44_RS24070 NONE
CHC44_RS05320 1030125 .. 1030136 -  -3.6  -4.07885   CATTTTTTGCTAAAA                CCGG CCCT CCAG                 AATAGCGTCAATTTC  57 8
CHC44_RS05315 1029630 .. 1029665 -  -7.7  -3.74227   ATAAAGACAGAAAGA   TAGCAGGCCCGATG-CG TGGG CGTCATCGGGC-TGTTA    TTCAGCAGGAGGCTT  71 39
CHC44_RS05305 1026794 .. 1026811 - -12.7  -5.61596   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTGCATTAAACC 100 46
CHC44_RS05280 NONE
CHC44_RS05275 1023187 .. 1023225 - -14.8  -3.53761   TAACGCCCGCTGAAA   CAGAATAAACGGCAGG GCAGACG CCTGCCGTTTATTCTT   TGTTAGTCCGCCTCA 100 28
CHC44_RS05265 NONE
CHC44_RS05260 NONE
CHC44_RS05255 NONE
CHC44_RS05250 1021082 .. 1021096 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
CHC44_RS05225 1016552 .. 1016566 -  -4.9  -3.37522   AGGCCAGCGAATTAA               CCGCC GCGAG GGCGA               AAGATCCGCTGTATC  54 110
CHC44_RS05215 1014329 .. 1014343 -  -7.1   -3.1876   AATGTCATTGATGAA               GCGGA AATGA TCCGC               TTACTGGGTGCCTGA  62 257
CHC44_RS05195 1010250 .. 1010275 -  -9.1  -3.10715   GTTATCAGTATGGAA         TAAGAGACAGC ATAA GCCATCTCTTA          TTTATACATTTTTAC  68 42
        cysK 1009113 .. 1009128 -  -6.8  -5.26316   GCAGGCCACAAAAAA              GCACCC AAAA AGGTGC               TTTTTTACGCGTTTT  87 54
CHC44_RS05185 1008500 .. 1008527 -    -2  -4.11692   GACTGATTTTTAAAA        GAACCCG-GAAAA AAA CTTACTCGAGTTC        CGCCATCAGTTTGAC  55 14
CHC44_RS05180 NONE
CHC44_RS05175 1006153 .. 1006170 - -12.7  -5.83822   TACAGGCAAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA 100 45
CHC44_RS05160 NONE
CHC44_RS05155 NONE
CHC44_RS05150 NONE
CHC44_RS05145 1001736 .. 1001755 -  -4.2  -2.87132   GCTGGTTGGGATATA            CACAGGCA ACGG CGCCTTTG             ACAAGCGGGAATATC  46 108
CHC44_RS05085 NONE
CHC44_RS05080 NONE
CHC44_RS05075  990865 ..  990882 -  -2.7  -3.45945   TTTATCTACAATGAA             CTCGT TTATTTCT ACGAG              CCTGCTTTTATTCAA  48 37
CHC44_RS05070  989409 ..  989422 -  -9.5  -3.30124   TGGTAGCCCGGACAA               GGCGC GCCA GCGCC                GCCTCCGGGGAAGCG  74 91
CHC44_RS04975  971566 ..  971581 -  -4.7  -2.64107   TAAAGTGTTAGATGA              GTGTG TTGATT CACAC               TTCTGAAAGATTGAT  46 44
         tal NONE
         tkt  968498 ..  968538 - -14.2  -3.40371   GAGTCTACGAAGTAA  TTTTGCACAGCCTACAGA ACAGG TCTGCAGACTGTGCAAAG  TCTGTGTTGCTAACG 100 47
CHC44_RS04945  964852 ..  964864 -  -5.5  -3.53012   CTGTCCGTGTCCAAA                CTGGC TGC GCCAA                TAACGCCTGGTGGGA  57 55
CHC44_RS04935  960563 ..  960576 -  -3.7  -3.57561   TGCCAACGCCGGAAA               GCCTG ACAT CTGGC                CTTCCGGCGATTTGC  53 47
CHC44_RS04930  957239 ..  957259 -    -9  -4.78237   TAGGGGATAAGAAAA            GGCGACTC AACGA AAGTCGCC            TTTTTTGTGCCCGAC  90 66
CHC44_RS04925 NONE
CHC44_RS04920 NONE
CHC44_RS04915  954601 ..  954614 -  -9.5  -2.54723   GCGCAACAGGAACAC               CGGCG TTTG CGCCG                CGATGCGGATATCCT  63 422
CHC44_RS04885 NONE
CHC44_RS04880  947675 ..  947686 -  -7.2  -3.02144   GTATTTGCGGCAAGA                CGCC GATT GGCG                 TCGCCAGAGTGGCGA  57 290
CHC44_RS04855 NONE
        arsC  940798 ..  940813 - -11.8  -3.12668   CCTGAAACTGTAATA              CGCCGC GACG GCGGCG               TTCAACGGTTAACCG  81 34
CHC44_RS04830 NONE
CHC44_RS04825 NONE
CHC44_RS04820  935907 ..  935925 -  -4.6  -2.94099   CTGTCCGATGACATA             TTATTCGT CAG ACGCATAA             CCTTGCGGCGGCAGA  48 7
        ppk1 NONE
CHC44_RS04810  932072 ..  932099 - -16.4  -3.78022   CTGAGATTCAGTAAA        GA-CAGACGCCGC GGC GCGGCGTCTGATC        CACAATTTACGCGGC 100 32
CHC44_RS04795  928967 ..  928987 -    -4  -2.89564   CGGTTATCGCAGAGA            TACTCACA CAGTT TGAGAGTA            CCGTACGTCAGTGCC  46 291
CHC44_RS04785 NONE
CHC44_RS04780  927747 ..  927766 -  -9.3   -3.2352   TAAAAGTGAATTTAA            CCCTCTG TTTTTG CAGAGGG             TTTTTATTTATGTGC  70 487
CHC44_RS04760  922925 ..  922947 - -12.7  -4.57474   GTAAGTTAGACAAAA          CCGGGC-GGG TGTT CCCTGCCCGG           TTTTGAGGCGAATGA 100 153
CHC44_RS04650  876772 ..  876784 -  -3.3   -2.5547   ATGGCGGATATTAAG                CGGGT TCA ACCGG                TAAATCGGTACGCGC  42 8
CHC44_RS04640  875736 ..  875751 - -10.4  -5.67967   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 126
CHC44_RS04635  875290 ..  875315 - -14.7  -4.66318   ATCATCTGAAGAAAA         GAAAGCCGCCC AACA GGGCGGCCTCC          TGGCTTACCTGCTCT 100 229
CHC44_RS24050  874207 ..  874249 -  -7.4  -3.44686   CGGAACTGAACAACA CCGGCAGCGCGGCGTATCCC GCC GGGGCAAGCACCGCCGCGGG TTTTCTGTCGCACTT  65 89
CHC44_RS04570  865243 ..  865268 - -16.9  -2.74784   ACGCCTGAAAAGGCA         CGGCGGATGAG TGGC CCCATCCGCCG          AAGAGACTTAGCGCT 100 33
CHC44_RS04565  864243 ..  864255 -  -5.5  -3.03028   AAATATGCATATATA                CAGCG TCG CGCTA                TTTAGCGGATAGCGC  52 23
CHC44_RS04560 NONE
CHC44_RS04555 NONE
        asrC  860709 ..  860732 -  -2.4  -4.82901   GGCGGGCCATAAAAA          GGTTACGC-GC GCT GCTACGTAAAC          CTGTCTTTATCGCTT  68 475
CHC44_RS04535  857805 ..  857823 -    -3  -4.72272   TGCCCTGAGTAAAAA             GCTATTCC GCC GGTTTAGC             GCCCGCGACTTGCTG  70 365
CHC44_RS04520  854014 ..  854041 -  -6.9   -4.2679   GAACGGGGAGGAAAA        CGGGCGTTCGC CTTAAC GATAACGCCCG         TTTTTTCAGAGGATT  72 49
CHC44_RS04515  852226 ..  852261 - -12.8  -3.23853   TCTTTGCAATGAATA    TGTTGCCAAAATTAAC ATAA GCTATTTTTGGCAACA     TGTTTTTCACAAAAT  86 97
        cadB  850577 ..  850591 -  -2.7  -3.53012   CTTGTTCCTGGTAAA               GTGGG CCCCT CCCGC               TACGCTATAGCAGGT  48 75
CHC44_RS04505  848384 ..  848405 - -14.5  -5.00616   TGCTGCGTGAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTTGGTACTTATTTC 100 34
CHC44_RS04500  846832 ..  846842 -  -2.4  -3.62597   CGTACTGGCGAAGAA                 GACG ACG CGGC                 TATCTGATGTGCCGA  49 81
CHC44_RS04470 NONE
CHC44_RS04465  836481 ..  836509 -  -9.4  -4.17132   AAAGCTCTGAAGAAA        GCCGACCGTGCG GAAGG CGCGGGGCCGGC        AGTATAGCGCAATGC  84 83
CHC44_RS04440  832022 ..  832048 -  -2.2  -3.61178   TTGATTCACGCTAAA         GAAGCGCAATAA ACT TGATGGCTCTTC         TGCATGAGGCGGAAG  49 49
CHC44_RS04425 NONE
CHC44_RS04420  828324 ..  828341 -    -2  -4.10161   GATGAGCTGGGAAAA             CCAC-GT TTGCG ACTGTGG             GGCGAGGCGTTAACG  56 242
CHC44_RS04345  816608 ..  816638 -  -7.4  -3.21099   CCGCCTTATTACGAA       CCCGGTGTGGAATG CGC CACGCCGCAGCGGG       AGCAGGCGCGTTACA  59 336
CHC44_RS04335  814734 ..  814755 - -14.5  -5.80817   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 32
CHC44_RS04325  813114 ..  813138 - -14.3  -3.94877   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 42
CHC44_RS04315  811654 ..  811667 -  -9.5  -3.48276   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATGCGGGCGATA  75 60
CHC44_RS04300  809899 ..  809919 - -14.7  -4.16943   TGGCAGAGGTGAAAA            CGGGGCACA AGA TGCGCCCCG            TGGCGTTTACAGCGC 100 32
CHC44_RS04295 NONE
         pat  806404 ..  806428 -  -2.1  -2.74269   TGCAGACGACATAAG          CGAGCAATAAT AAC ATCAGTACCCG          TTAAAGTGGTCAACA  40 56
CHC44_RS04285  804966 ..  804982 -  -9.4  -4.66938   ACTCCTAAGAGAAAA              CCCCGT ACAGG ACGGGG              CTTCGATTACAGGAT  91 32
CHC44_RS04280  804410 ..  804423 -  -3.8  -2.74144   GCGGGATCCTGAAAG               CGGA GATGTT TCCG                GCGCAGGTTCGCGCC  43 223
CHC44_RS24045  797005 ..  797022 -  -8.3   -4.6971   CAAATTTGAATAAAA             CGGGCCC TGAC GGGCTCG              TTTTTGTTTAAAAAC  89 184
CHC44_RS04230  791665 ..  791684 -   -15   -5.8187   TATCGAATAAAAAAA            CGGCAGCC GGAA GGCTGCCG             TTTTGCTTGTCTGTA 100 46
        raiA  791054 ..  791069 - -11.8   -5.4505   CCTGTCAACAAAAAA              CGCGCC CGAA GGCGCG               TTGGCGATACACTCA 100 51
CHC44_RS24040  790875 ..  790895 -   -14   -5.5112   GTTATCAATAAAAAA            GGCCTCCC GGTGG GGGAGGCC            TTCTTGTTCGTCTTC 100 49
        pheA  789682 ..  789708 -  -8.6  -3.05463   AGCCGTTTTATTGAA         CGTCAGGCAGGT TCT ACCGGCACGACG         TTTTCGCTGGGATAG  66 1
CHC44_RS04200 NONE
CHC44_RS04195  784269 ..  784291 -  -6.8  -4.30995   GCTTGTAGAAAAGAA           GGGGCTGGCA TTA CGCTGGCCCC           TTTTTTATGGGTTTG  74 119
CHC44_RS04165 NONE
CHC44_RS04160  779510 ..  779545 -  -9.1  -2.63479   AATAGGCCGAGATGA    CCACCATGATGATTA ATATGA TAATCAGCGTGGTGG     TGGAGATGTGTTCCA  66 61
CHC44_RS04155  778251 ..  778268 - -11.3    -5.252   GACGGCGATAAAAAA             GGCGAAC CGGA GTTCGCC              ATTGTGTTACTCCGC 100 32
CHC44_RS04150  777054 ..  777096 -  -2.7  -5.14563   CGCGCGATGAAAAAA TTGCGAATCTGGAAGTTCAG CTTG CAGAAGC-CCAGACTCGCGA ACGCGACACCGTGTT  79 478
CHC44_RS04135  775877 ..  775905 -  -3.3  -3.92178   ATGACTGTAATTAAA        TACAGTATAAA CTGGTTT TTTATACAGTA        AAGAGGCTAACGTAA  55 43
CHC44_RS04130 NONE
CHC44_RS04125  773389 ..  773400 -  -4.4  -4.85782   CTGGCGAAAAATAAA                GTAG GTAT CTAC                 AGTCGTCCGGTAAAA  77 314
        smpB  772093 ..  772121 - -13.3  -2.53613   ATGAGATATGAACAT        TGACCAGCTTC ATACTGA GAAGCTGGTCA        CAAAAAATGTCTATT  84 39
CHC44_RS04105  760051 ..  760068 -  -2.5  -3.14132   GGGCTTTTTTATCAA             CCGCCGG TTAT CAGGTGG              TTGTTCTGCAACAGA  45 4
CHC44_RS04100 NONE
CHC44_RS04095 NONE
CHC44_RS04090 NONE
        ssrA  754757 ..  754780 - -13.2  -5.34309   ACTACCAAAGAAAAA          GGGGCTACGT TTTC ACGTAACCCC           TTGTTTTATTTGGTG 100 36
CHC44_RS04035 NONE
CHC44_RS04030  745692 ..  745705 -  -5.3  -4.64676   CCACCTTTAATAAAA               TACAG TGGC CTGTA                TTACCACAATAATAA  73 41
CHC44_RS03925 NONE
CHC44_RS03920  730074 ..  730087 -  -2.3  -4.11692   TATTGATGGCGAAAA               CTCAC TAAT GTGTG                GTCCTGAAGATGGTG  56 276
CHC44_RS03910  728725 ..  728739 -    -5  -4.06678   ATTGAGGTACATAAA               GCACAA ATC TTGTAC               AAGGTGGGTATTAGA  63 177
CHC44_RS03900  728279 ..  728294 -  -7.5  -4.21462   ACGCATGATGCAAAA              CCCCG TAAGGG CGGGG               ATTGAACGAAGCTAC  74 37
CHC44_RS03895  727235 ..  727245 -  -3.2    -3.724   AACCCACGAATATAA                 CCAC TCA ATGG                 ATGTCGTTAACTGAG  53 397
CHC44_RS03840 NONE
CHC44_RS03835 NONE
CHC44_RS03830  718609 ..  718634 - -16.1  -5.47431   TGAAGACATAAAAAA         GCCCGCAGGGC TTGT GCCATGCGGGC          TTTCAGGACTTCATC 100 234
CHC44_RS03825  718246 ..  718257 -  -5.8  -4.33248   GAACTCGACAATAAA                GCGA CTCA TCGC                 CAGTCACCAATTCTG  70 29
CHC44_RS03780  708297 ..  708310 -  -2.4  -3.66908   GTTCTTGAAAACCAA               GGTT TTTGAT AACC                AATGTTATGCCAGGC  49 357
CHC44_RS03775  707730 ..  707744 -  -3.6  -3.51032   AGTCGTTAATGAGAA               TGATAA TAA TTACCA               ATATCATTTGAAAAA  50 65
CHC44_RS03770  706512 ..  706543 -  -2.3  -2.97021   CGGTGAAAGATGAGA      TATGGCGAC-ACAC GCTGG GTTCAGCCGCCATA      TTGTCATTGCGCTGC  41 46
CHC44_RS03765  702769 ..  702791 - -13.5  -3.77831   GTATCAATAGCTAAA           GCGGCTGTT ACAGG AACAGCCGC           TTGCGGGCTTTCTTT 100 64
CHC44_RS03760 NONE
CHC44_RS03755  700234 ..  700249 -  -3.2  -4.87291   TACGGCAAGCAAAAA              CCGC GAACACAT GCGG               AGTCGCGTAGTGAAG  74 285
CHC44_RS03735  695761 ..  695772 -  -4.4  -2.89482   AAGGCAACGAAGAAG                GTCT GTAC AGAC                 GATGTTGTTAAACAG  48 45
CHC44_RS03730  694620 ..  694656 - -11.1  -2.56271   TGTTGATCATAACAT   GAGTG-AAAGCGACGGT TTAAT ACCG-CGCTTTTCACTC   GCAAGCCATTCTGTA  74 123
CHC44_RS03725 NONE
CHC44_RS03720  693525 ..  693555 - -11.2   -4.7254   AGGGTTTATGAAAAA       CCTGGGCGTAAAAA ACA TATTTACGTCCAGG       CTTTCTTTTTAGCAA 100 34
CHC44_RS03700 NONE
CHC44_RS03695 NONE
CHC44_RS03690  686442 ..  686472 -  -2.5  -3.57263   AGCGTTATGGGGAAA      GTGATGCTGGCGGGG TTG CCCGGCCTG-A-CAC      ATGAGCGCGTAGGCC  50 70
CHC44_RS03685 NONE
CHC44_RS03680 NONE
CHC44_RS03675 NONE
CHC44_RS03670  681137 ..  681148 -  -2.2  -3.30124   TTGTAGGCCGGATAA                GACA GTTA CGTC                 GCCACCCGACGCTGC  45 51
CHC44_RS03665  679620 ..  679641 - -10.1  -2.57931   TTTACTCCTGAGAAG           CTTCCCGGC TGAC GCCGGGAAT            AACTAACGTAGGTTT  70 28
CHC44_RS03660  678566 ..  678577 -  -7.2  -4.93288   AACATTTAAATAAAA                CGGG AATA CCCG                 ACGCTGACAAAGTGA  91 373
CHC44_RS03645 NONE
CHC44_RS03640  677150 ..  677169 -  -2.9  -2.94747   TCAGTCTACTACACA            CTT-ACCG ATGCG CGGTGAAG            GTACCGCTTAATGAG  42 33
CHC44_RS03635  676672 ..  676696 -  -3.5  -3.18912   CCATGGATTCAGCAA          TGCCGCGTTCT GCT AAAAAGCGCCA          GCCGCGTCCGGCAAA  47 248
        alaE  675248 ..  675272 - -15.7  -4.35675   AAAAAGCGACTAAAA          GCGCGACTGGC AAT GCCAGTCGCGA          CGTTAACTTATGCCT 100 33
CHC44_RS03615  674268 ..  674288 -  -3.2  -2.77523   CGTTTACCAATATTA            CTTCCGCC GTCAT GGCGAAAC            AGGTCGCATGGCAGC  41 144
CHC44_RS03605  672465 ..  672479 -  -2.8  -3.62597   GCCATCCGGCAACAA               TGCG TCACATT CGCA               TACCGATCGCCAGAC  50 15
CHC44_RS03600  672227 ..  672246 -  -6.3  -4.67635   TTTAAAATGAGAAAA            CGGCGCG ATGAAA CGCGTCG             GATTGTCGTGTGTTG  78 75
CHC44_RS03595 NONE
CHC44_RS03590 NONE
CHC44_RS03585 NONE
        nrdF  668419 ..  668450 - -13.2  -4.41616   ATTGCTTGAAATAAA      GGCATGGGAAAT GTAACGTT ATTTCCCATGCC       CGTAAGGTTAAAAAT 100 33
CHC44_RS03570 NONE
CHC44_RS03565 NONE
CHC44_RS03560  664727 ..  664768 - -12.4  -3.16971   TGAGGAGAGATTGAA TAGGCCGGATAGCGGCGCA TGAAC TGCGCCT-TATCCGGCATA AAAAACGATATTATT  86 36
CHC44_RS03555  662993 ..  663007 -  -5.8  -4.29621   GACAAATAAAGTAAA               TGTATT ATT AATACA               AAATCATTCTTTCAG  67 448
CHC44_RS03550  662332 ..  662355 -  -7.4  -3.85817   ACCTGTTGTCAGAAA          GGCCAGCA GTAATGCG TGCCGGCC           TGTCCGCTTTCCTGT  68 73
CHC44_RS03545 NONE
        emrB  659520 ..  659535 -    -9  -5.14563   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  93 39
CHC44_RS03485  652828 ..  652873 -    -9  -3.61089   TTGCAATAATTATAA GCGTT--CGTTGGCGCCGCAGC CCAT GCTGCGGCGTTTACGTCAACGC TATCGACAACGATAA  75 406
CHC44_RS03450  646723 ..  646756 -  -6.7  -3.57144   CCGGCGAGCTGGAAA     CCTTCCTGCTCATGG CGCG CGATGAGCAAGACGA      TCCGCTCAATCTGAA  60 523
        srlA NONE
        srlE NONE
CHC44_RS03430 NONE
CHC44_RS03425  643184 ..  643205 -    -3  -2.52896   CCATCCGGCAATTCA           CGGTCA GAACATCACT TGACCG            CCGGTTACGTTGATC  40 7
CHC44_RS03420 NONE
        srlR NONE
CHC44_RS03410  640777 ..  640804 -  -9.1  -2.64155   GGCGCTGGAAACCGA        CGTCGCCAACC TGCATC GGCTGGCGAAG         CGTCTGGGACTGAAG  66 43
CHC44_RS03400 NONE
CHC44_RS03395  636518 ..  636530 -  -4.7  -3.30124   TCGTAGGCCGGATAA                GACGC GAA GCGGC                GCCATCCGGCATCAC  52 45
CHC44_RS03330 NONE
        hypA NONE
        hypB NONE
        hypC NONE
CHC44_RS03310 NONE
        hypE  620619 ..  620630 -  -7.2  -2.99325   GCCTGATAAGCAAAG                CGCC ATCA GGCG                 TTCATGCAGCGTTAA  60 99
CHC44_RS03300  618163 ..  618203 -  -9.6  -4.72272   TTTGGCGAGGAAAAA  CCCGCCTGTAAGCAGTGC CCGGT GCACTGCTATCAGCCGGC  TAAACGCGAGGAGAT  95 229
CHC44_RS03290 NONE
CHC44_RS03285 NONE
CHC44_RS03280 NONE
CHC44_RS03275  614180 ..  614192 -  -4.8   -4.2711   ACAAAAAGAATGAAA                CGCT TTATG AGCG                ATTCGATAACAATGC  66 221
CHC44_RS03260  611727 ..  611737 -  -2.4  -3.06183   GGCATTTGTACGTAA                 GCCC GGT GGGT                 TTGATTTCCTTGAGC  42 394
CHC44_RS03215  605119 ..  605151 - -11.3  -4.81163   TAAATATGAATAAAA      TGCCGGCCTTAATCC ACA GGGTTAAAGCCGGAA      GGAGATAGTGTCATC 100 296
CHC44_RS03210 NONE
        iagB  602125 ..  602158 - -12.7  -4.04397   ACGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 37
        invH  579185 ..  579202 -    -7   -5.7946   TCGCCAATAAAAAAA             GCAGCA GCGAGG TGCTGC              TGTATCAAAAAGCAG 100 179
CHC44_RS03085 NONE
CHC44_RS03080  578038 ..  578054 -  -2.3  -3.63054   GAAAGGTAGATACAA              CACATTA TTT TAATTTG              AAAAGTATATGAAAT  49 114
CHC44_RS03065 NONE
CHC44_RS03060  575599 ..  575613 -  -2.1  -3.19038   CGTAAAATCAGGGAA              GCC-TC GGCT GACGGC               GCTTATGACACGCGC  44 431
CHC44_RS03050  574262 ..  574272 -  -6.8  -4.01902   ATATTGACGAAACAA                 GGCA AGC TGCC                 AGGCAATTAGTTCAG  68 400
        mutS  571157 ..  571189 -  -4.8  -3.84825   GTCATTTACATGAAA     CGACAGCCACAGCCT GAAA AGCCTGTG-CCGGCG      CGTGGGCCCGATAAC  59 65
CHC44_RS03025  568527 ..  568542 -  -6.1   -3.2827   GTAGTTAAGGATTAA              GACGG TATTAT CCGTC               CGGGAGCGCAATGCT  59 51
CHC44_RS02990  561469 ..  561482 -  -9.5  -3.11459   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTCGCTATTGTTTGG  71 30
CHC44_RS02980 NONE
CHC44_RS02975 NONE
CHC44_RS02970  558600 ..  558619 - -13.6  -5.40072   CCCTTGTCAAAAAAA            GGCCAGTC GACA GACTGGCC             TTTTTTTTACCGTTT 100 32
CHC44_RS02905  547437 ..  547460 -  -6.6  -4.59853   GCAAGGGCTGAAAAA          TGTTCCCCGC GTCA GCGGGGATAA           ACACGTTTCACCAGC  79 44
        sopD  535405 ..  535423 -  -2.5  -2.64973   ATGAAGGGTATATTA            CTGAC-TA TCTT TATGTCAG             TAATATATTACGACT  40 17
CHC44_RS02850  534903 ..  534915 -  -3.3  -4.08064   AACCGGGCGCTAAAA                GAGCT GAA AGCGC                AGACGTGGTTTGCGG  58 201
        queD  529797 ..  529810 -  -2.3  -2.80252   ACTGTCAGAACATTA               CCGGT ATAA AGCGG                ATTTACGCGCTTGTC  39 298
CHC44_RS02795  521570 ..  521615 -  -5.4  -4.63932   TATTCCGCAATAAAA CTCAACAGGAATACCCTACC TAAAGC GGCAGGGTATTATCGTCGTG ACTCTGTTAACTGAA  74 41
CHC44_RS02790 NONE
CHC44_RS02785 NONE
CHC44_RS02780 NONE
CHC44_RS02775 NONE
CHC44_RS02770  516510 ..  516524 -  -5.8  -2.90798   TTAGAAATGAGTATA               TAACTT GAG AAGTTA               CTGATATTCAAAACT  51 23
CHC44_RS02765  515190 ..  515218 -  -7.3  -2.71712   GGCCTCGCCCTAAAG        GGCCGCCGTAAGC GGC GTTCACATCGGCC        TTGCCAATTTGTCCT  58 243
CHC44_RS02750  508664 ..  508678 -  -8.5  -3.30124   TTGTAGGCCGGATAA               GGCGG TCACG CCGCC               ATCCGGCGAATATCA  69 38
CHC44_RS02725  502898 ..  502917 - -10.7  -2.78679   TTTCCTGAGGTAAAT            CCCTCCC CCCTAC GGGAGGG             TACCTTTTCGTTTGC  74 148
CHC44_RS02695 NONE
CHC44_RS02690  497726 ..  497752 - -13.7  -2.62425   AAGGAATGGGAGAAG         CGCCCGGCTGC TGGCG GCAACCGGGCA         TAAGCGTTAAGCGCA  86 32
CHC44_RS02685  495878 ..  495896 - -13.1  -3.61902   TTGTATCATAGAGAA             GCGCCGC GGTAA GCGGCGC             TAAAGGACTTAGCTG 100 34
CHC44_RS02680  494424 ..  494452 -  -7.5  -4.69053   CATCAGGCAACAAAA       GCCGGAT--GGCG GCGAG CGCCTTATCCGGC       TTACAGATCCTAAAA  86 52
CHC44_RS02670  493553 ..  493570 -  -5.5  -4.63932   CATCCGGCAACAAAA             CTACCGC GCCA GCCGTAG              CTGCTGTAAGTTTCC  74 8
        fucP NONE
        fucI  487885 ..  487899 -  -4.2  -3.94381   AGATAACTCCATAAA               CGCC GCCCGAT GGCG               CTACGCTTATCCGGC  57 96
CHC44_RS02645 NONE
CHC44_RS02640  485995 ..  486013 - -13.1  -3.17212   CCATCATTCGATGAA             CGCCCGC GTCAT GCGGGCG             CACCGGCAAGAGATT  91 39
CHC44_RS02635  485204 ..  485250 - -10.9  -4.88736   GACGAGCGATAAAAA CGCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGCT TATCCGGCCTATGAC 100 34
CHC44_RS02610 NONE
        csdE  480045 ..  480069 -  -3.6  -3.15788   CCCCATAATATAAAT         GCCAGTACCAC AAAC ATGGTACCG-C          TACGCAGATATTTTT  46 317
        rarD  479128 ..  479144 -    -5  -3.33769   ACAAGAATAAAAGGA              CGGGGC GGAGT GCCACG              CAGACGCGTATCCGG  54 55
CHC44_RS02585  476801 ..  476814 -  -8.1  -5.77988   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT 100 36
CHC44_RS02575  473793 ..  473806 -  -4.5  -3.32963   AGTCGTACCGGATAA               GACGA GTTC TCGCC                GGATGGCGACGCGTA  52 114
CHC44_RS02530  459679 ..  459690 -  -7.2  -2.53271   CGAGCTGGATAAGAT                GGCG CTGG CGCC                 GTGTCACGCCTTTTT  53 379
CHC44_RS02505  453849 ..  453868 -  -9.2  -2.91199   GAAGCGGTAATTATA            GGCCCGTC GAGT GACGGGCG             AAAGCCCAGGCTGAA  67 149
CHC44_RS02500  453064 ..  453092 -  -9.6  -2.82263   AAGGAAATAAAGTGA       GTATTCGCTCCCC GGCG GGGGAGCGAG-AC        AGGATTACAGCGGAT  69 30
CHC44_RS02495  452683 ..  452707 -  -3.5  -3.30159   TGAAGGCTTGCAGAA          CGCTGACCT CGATCAC AGGCCACCG          CTTAACGTTCGATGA  48 27
CHC44_RS02490  451094 ..  451111 -  -5.5  -2.78596   GATCTTCTCATTACA             GCACGCA TTGC TGCCTGC              TTATGCCTTGTTGCT  47 392
CHC44_RS02475 NONE
CHC44_RS02470  445347 ..  445359 -  -3.3  -3.11634   CGTCAGACCATTGAA                GAGCT GTT AGCGC                TGGAGATGCTCTGAA  45 49
CHC44_RS02460  442611 ..  442637 -  -7.3  -2.57211   AGGCGGGCGCAGAAG         GCATTGTGCTG TGTAC CAACACCATGC         ATAAAATCGCGCACG  54 446
CHC44_RS02430  438332 ..  438342 -  -8.2  -3.64682   CACGAAATGGTTAAA                 CGCG ACG CGCG                 AAAAGGTCTGGCGAC  68 131
CHC44_RS02415  435582 ..  435604 -  -3.4  -4.62708   AACACACAAAAAGAA           GCGCAATTTA CCA TAAATAGCGT           CAGTTGGGGGCGTTT  66 107
CHC44_RS02410  434282 ..  434305 - -12.5  -4.53303   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 35
CHC44_RS02400  432908 ..  432925 -  -4.9  -3.84985   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  59 117
CHC44_RS02330  422457 ..  422480 -  -4.5  -3.57144   TGCCTGATCGTCAAA          GCCAACATG CCCCTT CAGGCTGGC           TTATAAGTCAGAGTG  55 108
CHC44_RS02325  421191 ..  421221 -  -8.4  -3.30701   GGGGAGTAAACCGAA      GTGCTGAC-GGCGA ATTAA TCGCCAGTCAGC-C      AGTAAGTCTCTTGCC  69 286
CHC44_RS02310  420196 ..  420219 -  -8.1  -4.67038   TCCTGAAAATTAAAA          TGACCCGGC AGCATG GCCAGGCCA           TATACTCAGACGATC  85 31
CHC44_RS02305  419562 ..  419594 - -14.2  -3.82865   GAAATAAGATGTAAA     TTGCCGGATGG-GGC ATCA GCCGCCATCCGGCAT      CTCTTCGTTCAGGCG 100 60
CHC44_RS02275  412765 ..  412788 - -12.4  -3.37245   TCAGGCCAACACTAA          CGGAACGGCG TAAA CGCGGTTCCG           TCGAGAGGGAAGTAC  90 54
CHC44_RS02260 NONE
CHC44_RS02255  410677 ..  410694 -  -9.1   -3.3514   ACGCATACCTTATAA             CCACGCC ATCT GGCATGG              CTTTGTGCTGGGCGG  66 205
CHC44_RS02235  407998 ..  408023 - -13.3  -2.73007   AAGACTCGTTCAAAG         TGTTACCCGCC GACT GGCGGGTAACG          TGCAGGAGTTAAAGC  85 34
CHC44_RS02180  396688 ..  396709 -  -8.1  -3.28791   ATTCTGTTTTCACAA           TCACTTTAC CATA GTAAAGCGA            AAAGTGTTATTCAAA  65 32
        ssrS  396489 ..  396509 -  -3.9  -3.35679   TGTCGCCAGTCAGAA            GGGGAATCT CCG AGATGCCGC            CGCAGGCTGTAACCC  50 7
CHC44_RS02170  395684 ..  395703 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTAC CGAG GCAGGGGC             TCTAAAAAGGAAAGG  91 196
CHC44_RS02155 NONE
CHC44_RS02150  391885 ..  391901 -  -7.9  -3.84246   GTGCGAATGATGAAA              GCCGCAG ATG CTGCGCC              GGTATCCGCGCAGGA  68 194
CHC44_RS02115  385484 ..  385498 -  -4.2  -2.62983   GTCATCGTTACAGGA               CTCCGA GAC TCGGAC               GTGGCGCTGATAATA  44 3
CHC44_RS02110 NONE
CHC44_RS02105 NONE
CHC44_RS02100 NONE
CHC44_RS02095 NONE
CHC44_RS02090  382398 ..  382417 -   -15  -4.42619   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTATTCCCCCTT 100 29
CHC44_RS02080  379319 ..  379330 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCCATCCGGCACTGT  63 48
        metK  365879 ..  365897 - -12.4  -4.08546   ATCAGCAATGATAAA             GGCCAGCA GAG CGCTGGCC             TTGATAAGTACGGTA 100 80
CHC44_RS02000  364030 ..  364056 -   -21  -5.08601   GGACTGCAAGAAAAA         CGCTTCCTCCTG TGG CAGGAGGAAGCG         TGGAGGGATTAGTCG 100 34
CHC44_RS01995  363469 ..  363489 -  -9.7  -3.72695   AGTCCGCTCAGGAAA            GTTCCCGGA CGT TTCGGGAAC            TACCCGGCGACCAGT  79 25
CHC44_RS01990  362622 ..  362638 -  -3.5  -4.11512   GCATAATAAAAAAAT              CCGCGTC ATG GCCCCGG              CGTTTGGCTATCCAG  57 74
CHC44_RS01985 NONE
CHC44_RS01980  360777 ..  360799 - -10.6  -3.51924   TTGTCACTCATATAA           GCCGTCTTTT GCC AAAGGACGGC           GGCCTTATCGGGCAA  81 138
CHC44_RS01975 NONE
CHC44_RS01970  359652 ..  359676 -  -2.2    -3.794   GCTGAAGGCACTAAA         CCA-GCTTATT GCCC AGTAAGCCTGG          CAACCGTGACCGCGT  51 66
CHC44_RS01955 NONE
CHC44_RS01950 NONE
CHC44_RS01945 NONE
CHC44_RS01940 NONE
CHC44_RS01935  354455 ..  354479 -  -5.8  -3.78312   AAAGGAGTTATTAAA          TAATGCGC TTGCCGGCG GCGCATTA          ACCGCCACAGGTCGG  61 94
CHC44_RS01900 NONE
CHC44_RS01895 NONE
CHC44_RS01890  347385 ..  347396 -  -5.8  -4.11751   ATGAATGTTTTAAAA                GGCA CATT TGCC                 GTTGTGATTTGGTGT  65 189
CHC44_RS01885  346026 ..  346077 - -18.3  -3.51708   TATGTTTTAAAGTAA CGTTGCCTGCAGGCCGGATAAGGCA TTTA CGCCTTATCCGGCCTGC-GA-AACA GGGCAAGAATTAATG 100 35
CHC44_RS01870  342657 ..  342678 -  -3.8  -2.71364   CTATCCGGGCAACGA           GGCGCATTA AACCG TAAT-CGCC           TCGCTTCGTCAACGA  45 104
CHC44_RS01865  342184 ..  342204 -  -3.3  -2.95177   GCGCAAAAAATTAAC            CTCCATC AGCAAGA AATGGAG            TTCGAACCAAAAGCG  42 397
CHC44_RS01840  337858 ..  337876 -    -6  -3.48276   GCGCCTCGCACACAA             TATGGTGT TGA ACTCCATA             ATCAGGCGGCCTGGA  57 408
CHC44_RS01825  333992 ..  334008 -  -7.2  -3.66256   CATATGGGGAAAAGA              CCCGCA ATTGA CGCGGG              TTAAAAAGAACGCTT  67 41
CHC44_RS01800  328274 ..  328286 -  -7.7  -3.08312   AACGCAGCGAGCGAA                CCTGA TAA TCAGG                CAGACAGTCCACCTT  62 79
        uxuA  321452 ..  321476 - -16.5  -3.62275   ATTGAGTAGGGGAAA          TCGCATGACGC GTC GCGCCATGCGA          AAGAAGGTTATTTGC 100 33
CHC44_RS01765 NONE
CHC44_RS01760  318167 ..  318177 -  -3.2  -4.65263   ATTTGTTAAAAGAAA                 CCAC ACT GTGA                 AGTCATAAGTTATTA  66 325
CHC44_RS01750  316189 ..  316199 -  -4.6  -4.09685   GGCTATGCGGTAAAA                 CCGA TTG CCGG                 ACGTTGCGGTAGTAA  62 386
CHC44_RS01740  313460 ..  313492 -   -10  -2.76468   CAGCAGGGAATACCA     TGCCGGATGACGACA TTAC TACC-TCATCCGGCA      TCATGGTTTAACTTT  71 33
CHC44_RS01660 NONE
CHC44_RS01655  300259 ..  300276 -  -2.7  -2.91681   CTTTAAGCGTAGACA             CTTTTAC TACC GTAAGAG              GGAGAATCAGAACGA  42 89
CHC44_RS01650  299284 ..  299313 -  -6.3  -3.55444   TTTTTATTGCCTAAA       GTGGCGCCTTGCT TAAC AGAATTGCGCCAC        CTTAATCGACTTCAT  60 44
CHC44_RS01630  296563 ..  296591 -  -4.5  -4.20516   CCCGGACGCAACAAA        CGCAGACTTTTCC ACG GAAATTGTCTGCA        TATATGTCCATCCCC  64 48
CHC44_RS01625  295781 ..  295808 -  -5.6  -2.60392   CACGGGTCAACGAAG        CGTAACCGGGCCA TCC TGGCC-GATTATG        GATACGTCAGGCGTT  50 32
CHC44_RS01615 NONE
CHC44_RS01610  292522 ..  292541 -   -15  -5.15969   TCGGAATGCAAAAAA            GCCCGACG ACAT CGTCGGGC             ATGGCGTGCGATAAA 100 47
CHC44_RS01605 NONE
CHC44_RS01600  290008 ..  290022 -  -7.2  -2.73334   ATTAATTATATATTA               CCTTAA TGA TTAAGG               CATGATGCTTGTATA  58 415
CHC44_RS01585  286189 ..  286207 - -12.4  -3.56821   ATTACATCCTGTAAA             GGGCAGGA GAA CCCTGCCC             GGCAGATTTACATAT  93 33
CHC44_RS01580 NONE
CHC44_RS01575  284307 ..  284321 -  -7.1  -2.73124   CTCGATTGGGCAAAT               GCTGG TGAAT CCAGC               GTCGTAAAGCGTCCG  58 77
CHC44_RS01545 NONE
CHC44_RS01540  275963 ..  275987 -  -4.3  -3.67068   AGCAAAATGTGCAAA          GTCTTTTGC GTTTTTG GCAAAAGTC          TGTGTTACCAACTTA  55 30
CHC44_RS01535  275308 ..  275320 -  -4.1  -3.10894   AGGATGACCAGTTAA                GCAAA AAT TTCGC                TCAGATGCTTGCGAT  47 9
CHC44_RS01530  274771 ..  274784 -  -2.3  -4.15044   CTGCTGGCGAAGAAA               CGTTC TGAA GATCG                ACGCAACTGGCTACA  56 199
CHC44_RS01500  268685 ..  268742 - -22.9  -2.78384   CGCGGCTTTATGACA GGTAGCGCCGCGCTTACCAGACCTACA AGGG CACAGGTCTGATAAGCGCAGCGCCAGC GAATAACTTATCTAT 100 33
CHC44_RS01490 NONE
CHC44_RS01485  266660 ..  266689 -  -8.5  -2.71681   TAAGGCGCTGAATGA       TTGCCCGATG-GCG CTA CGCGCATCGGGCTT       GCAGGAGAATCTATC  64 36
CHC44_RS01475  264676 ..  264689 -  -2.5  -3.61178   TTTAGTGATGTTAAA               TTTTA AGGG TAAAA                AGGATGTTTATTGCC  50 272
CHC44_RS01465 NONE
CHC44_RS01460 NONE
CHC44_RS01455  261069 ..  261094 - -15.5   -4.3898   ATTATTGTGAGAAAA         GCAGAGGCCTG AATG CAGACCTCTGC          TTTGGTTTATCTATT 100 45
CHC44_RS01445  259528 ..  259545 -  -8.3  -2.64243   TCAGATCTTATATGA             GCGGGCC GTCA GGCCCGT              TCACGTTTTTACTCT  63 34
CHC44_RS01435 NONE
CHC44_RS01430  256654 ..  256675 - -12.3   -5.9667   AAAAAGATAAAAAAA           TCCCCGGTC TTAT GACCAGGGA            CAGGAGATATGGCGG 100 45
CHC44_RS01405 NONE
CHC44_RS01400  248293 ..  248336 -  -6.6  -3.28712   TTGCCGGTCTGATAA GCGCAGCGCCATCAGGCA ATTTATCG TGCCGGATGGCGTTTAGC TGGCGGGGTTCGGGC  61 21
CHC44_RS01385 NONE
CHC44_RS01380  245659 ..  245679 -  -5.3   -4.2704   GCGACGACGAACAAA            CTCGCGC TGATATC GCGCGCG            CTTTTGAAGATGCGG  69 231
CHC44_RS01370  244449 ..  244475 - -10.9  -4.40882   CATAAACGAAAACAA        GCCGCGCATTCC TTTC GGAA-GCACGGC         CTTACAACTACAACT  90 75
CHC44_RS01365 NONE
CHC44_RS01360  240510 ..  240527 - -14.1  -5.60993   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 45
CHC44_RS01350  239669 ..  239688 -  -7.8  -5.38054   TGTCAGAAACAAAAA            GGCCACTC TTTA GAGTGGCT             TAATTATATGATTTT  95 53
CHC44_RS01340  237943 ..  238001 -  -5.3   -4.2349   GCGTTACATTTAAAA GAGCTGG-TTAA-CGTGTTCCGCGTCCGC GAA GAGGACACGCAGCCCGCTTAATCCAGTTC GGCGATTTCCAGCGC  65 14
CHC44_RS01325 NONE
        ygjG  232678 ..  232703 -  -8.3  -2.87598   ACCCGGAGAAAACAG         GCCGGATAAGCA TAG CGCC-ATCCGGC         ATCGTTTTTAAACCT  65 33
CHC44_RS01315  230442 ..  230492 - -13.5  -3.29144   GGACGCCGTCGATAA GGCGCTCAAG-CGTCATACCGGCCT ATA AAACCGGTATGACGGCGTAAGC-CC GATAAGCGCAGCGCC 100 55
CHC44_RS01305  228620 ..  228635 -  -3.2  -2.88427   AATACCCTCTACAGA              TCGTCA TCCT TGACGT               GGCGGCAGGCAATGA  44 112
CHC44_RS01300 NONE
CHC44_RS01295  226546 ..  226571 - -15.5  -6.11644   CTATGCAAAAAAAAA         CGGCTAACGCC GAAT GGCATTAGCCG          TTGCTTTTATGCATA 100 245
CHC44_RS01290  225493 ..  225519 -   -13  -5.28942   CATGTTAAACAAAAA         CGCCCGACAG GTGTGCG CTGCCGGGCG         TTTTTGACGGGGCAG 100 59
CHC44_RS01285  224066 ..  224078 -  -6.2  -3.08133   CACTTAGCTACGCAA                GGCG TTATT CGCC                AGACGTTCGTCCTCT  56 1
        yqjA NONE
CHC44_RS01270  222518 ..  222529 -  -4.4  -4.16371   CATTAAACAATGAAA                TCAC CAAA GTGA                 GTGATATGATTCGGA  64 51
CHC44_RS01265 NONE
CHC44_RS01260  221696 ..  221708 -  -4.1  -2.57683   AGAGTCCGCCATAAT                TAACG ACG CGTCA                GCAGTACGCCCAACA  44 12
CHC44_RS01255 NONE
CHC44_RS01250  220944 ..  220981 - -20.7  -4.45485   ACGATATGCATAAAA   GTATCGCGCCACCAGGT GATA ACCTGATGGCGCGATGC    TATAAAAGAAAAGAT 100 42
CHC44_RS01245  220325 ..  220344 -  -6.4  -4.50976   CTTCAGATGACAAAA            GCGAGG CGCTATTC CCTCGC             TTTTTTAATTGAGTA  76 49
CHC44_RS01240  219291 ..  219308 - -12.7  -3.73647   GGCATTTATTAATAA             GGCGTCC CGGA GGACGCC              TGAAATTAGCCAAAG 100 31
CHC44_RS01235  218808 ..  218822 - -12.8  -4.07568   CGCGGCGCTTTAAAA               GCGGCG CCG CGCCGC               CCTCAGGAAAAACGT 100 28
CHC44_RS01225 NONE
CHC44_RS01220  216790 ..  216812 -    -9  -3.99374   GCGCATTAATAATAA           CGCCCCGGCA TGA CGTCGGGGCA           GCGTGTTGCCCGATG  79 109
CHC44_RS01175  204796 ..  204825 -  -2.1  -2.83249   GGTGACATAATATTA       TTCGTTTTGTGAT GAGA AACACAAAACGCC        ATAGACTGCGCTCTT  40 80
CHC44_RS01170  204454 ..  204467 -  -9.5   -4.3739   CACCTCTTCATAAAA               CCCGC TTCG GCGGG                TTTTTGCTTTTACAG  86 104
        garD  198854 ..  198871 -  -7.7  -4.46493   TCAAACATATGAAAA             CATGGCC CTTA AGCCATG              TTTTGCGAGGCGCTT  82 52
CHC44_RS01125 NONE
        pfkB NONE
CHC44_RS01115 NONE
CHC44_RS01110  192468 ..  192491 -   -16  -4.72272   CTTTGTCATGAAAAA          CCGTACCCGC CGGA GCGGGCACGG           AGGAACAAATGAAGG 100 41
CHC44_RS01105 NONE
CHC44_RS01100 NONE
CHC44_RS01095 NONE
CHC44_RS01090  188839 ..  188866 -    -4  -3.15427   AACATTCTCCAGGAA        GGTGAGGGGAGC GATT GCTCCCCTAAAA         TTAAGAGGCGATTTG  48 26
CHC44_RS01085  187748 ..  187776 -  -4.5  -4.06903   AATTTCGAAAGGAAA        TGTGAGCCAGC GCAGGTT GCTGGCTCGTA        CCATCAGGAAAGTTG  61 29
CHC44_RS01080  186680 ..  186692 -  -6.3  -3.96148   CGCTGGCAGCAGAAA                TTCAC GGC GTGAA                GAAAAATGCGCTGTA  65 229
CHC44_RS01070 NONE
CHC44_RS01065 NONE
CHC44_RS01060  182811 ..  182822 -  -4.4  -2.71731   TGTACTCCTTAATCA                TCCT GGTG AGGA                 AAAAGCGTGTTATCG  47 7
CHC44_RS01055 NONE
CHC44_RS01045  180487 ..  180503 -  -2.1  -3.90744   TGGCTGGCGAAACAA              CACGTGG TGA CCTGGTG              CGTACACCATGAGGG  52 390
CHC44_RS01035  179952 ..  179962 -  -2.4  -2.87211   ATCCGGCGTTATATA                 GCCG CTT CGGT                 TTTGAACTGGCCGCA  40 153
CHC44_RS01020 NONE
CHC44_RS01015  176906 ..  176931 - -14.1  -3.24926   GACGGCAAAAACAAT         GCCCGAT-AGCG CTG CGCTTATCGGGC         CTACGGGATCGCTAT  95 77
CHC44_RS01010  175436 ..  175446 -  -2.4  -4.09685   TGGGACGTTTTAAAA                 CGGC GCT GCTG                 ACTTTCCTGCCGCCG  56 377
CHC44_RS00950  160191 ..  160206 - -11.8  -5.29782   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC 100 47
CHC44_RS00915  153227 ..  153239 -  -4.7  -4.84761   ACAGGCGCAGAAAAA                GGGGC TAC GCTCC                CGTGCCTGGTTTAAA  77 449
CHC44_RS00905  152614 ..  152628 - -12.8  -5.13137   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 118
CHC44_RS00895  150324 ..  150343 - -16.4  -3.41587   GCCTACAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 90
CHC44_RS00870  146183 ..  146198 -  -6.1  -2.79023   GAACGGCATTAACGA              TCGCG CTGCAC CGCGA               TGTGTGCGAGACCGA  53 3
CHC44_RS00865  145618 ..  145641 -  -9.6  -3.63515   CTGTACGCTGAATAA          CCCCCGCGAAC GCG ATT-GCGGGGG          TTATTTTACAGGCAC  77 41
CHC44_RS00825 NONE
CHC44_RS00820  138553 ..  138568 -  -4.6  -2.62616   TGAGTTTCTACACGA              CGCCTG CACG CAGGAG               ATCATGCATATGTAA  46 2
CHC44_RS00815 NONE
        lptC NONE
CHC44_RS00805 NONE
        lptB NONE
CHC44_RS00795 NONE
CHC44_RS00790  134286 ..  134312 -   -13  -3.92522   CGCTAACTGTACAAA         TGGCCCGTTGTG TCA CACAACAGGCCG         TCCTGCACTGGCTAA 100 53
CHC44_RS00785 NONE
CHC44_RS00780 NONE
CHC44_RS00775  132331 ..  132344 -  -2.5  -4.58283   CAAGTCCTGGAAAAA               TTTAT TCAC ATAAA                TTTAGTATGGACAAA  63 243
CHC44_RS00765  131501 ..  131512 -  -7.2  -3.32844   TCCGTTACGCTATAA                GGCG AATG CGCC                 GTCTGGCTATGTGCG  61 194
CHC44_RS00735 NONE
CHC44_RS00730  120035 ..  120075 -   -11  -2.52519   TGAGGAGAGGAATAT CGGCTCCCCAGCCATCAGC CAAG GCAGTAAGC-GGGGAGCCG  GAAGGGTTACACTTC  74 32
CHC44_RS00725  118639 ..  118657 -  -2.5  -3.28712   GGGCCCTGGCTATAA            TTGTTGTC CTGC GACA-CAA             CGCCTCCATGAATTT  46 140
CHC44_RS00720 NONE
CHC44_RS00715  115684 ..  115695 -  -7.2  -3.96327   AGGCCGCAGGAGAAA                GCGC CGGG GCGC                 TATGAATTGCAGGGC  71 465
CHC44_RS00650  105190 ..  105208 - -11.7  -3.13082   GGAAAGATAGAGAGA             GGGCGCA AGCGA TGCGCCC             GATAAATTTCTTAAC  83 50
CHC44_RS00645  103667 ..  103696 -  -7.9  -3.11192   CATACCATGAGTTAA       CCGGACATCA-CAT CGC AGGCTGATGCCCGG       TTTAAGACAGGATTA  62 38
CHC44_RS00640  102313 ..  102330 -    -7  -4.07568   TGGTCGCCTGGAAAA             GCGCAT CGCAGT ATGCGC              GTCAACAGGCGCAAC  70 241
CHC44_RS00585   91973 ..   91999 -   -13  -2.73099   GAGAGGACAAAAAGG         TGCCTCCGCCGT ACG ACGACGGAGGAA         GTGGGACTAAAGCTC  85 32
CHC44_RS00580 NONE
CHC44_RS00575   90963 ..   90981 - -13.1  -5.47914   AAAAAGCATAAAAAA             GCCCCCG GCAGG CGGGGGC             AAGTCGTCGGGTTAG 100 52
CHC44_RS00550   86156 ..   86211 - -10.6  -2.59564   GCGGCACCGCATAAC TGC-CCGC-CTTATCAGGCCTGTGGTG TGTGC CGCC-CAGGCCTGATAAGCGCAGCGCC ATCAGGAAATGTCAG  74 91
CHC44_RS00505   75442 ..   75452 -  -6.8  -4.29845   GAAGCGAACGGAAAA                 CCAG CTT CTGG                 TTCAAAGTCTGGTAG  74 219
CHC44_RS00495   72413 ..   72461 -  -7.6  -2.94099   CTTTTTCATCACAGA CTCCCGGTC-TACCCACCACAACA TGG CGT-GTAGTGAATATGACAGGGAG TGTGTCAATGTGTAA  59 83
CHC44_RS00490 NONE
CHC44_RS00485   70651 ..   70664 -  -4.5   -4.4078   TTCTGCGAACGAAAA               TCGCC GTTG GGCAA                TGTAAAGTCGCACAT  66 163
CHC44_RS00480   69928 ..   69955 -  -2.7  -3.09803   CAATTTTATCCAACA        TGTTCGCC-TCG TTACT CGATGACGACCA        GTGGCTCGTCAAATT  43 9
        accC   68543 ..   68559 - -10.8  -5.72622   CCCAGAAATAAAAAA              GGCCGG ATTCA CCGGCC              TTTTGAGACTAACGT 100 45
CHC44_RS00470 NONE
CHC44_RS00465 NONE
CHC44_RS00460   65865 ..   65884 - -11.4  -4.36914   GTTGTGTGGAGAAAA            GCGTGGCC GGGC GACCACGC             TGACAAGAATTATTT  93 35
CHC44_RS00455 NONE
CHC44_RS00450   63891 ..   63916 -  -8.2    -5.252   GATGCGTATAAAAAA         GGCGCTTCCC CATGCC GAGTAGCGCC          TTTTTAAACAAGCAG  91 55
CHC44_RS00445 NONE
CHC44_RS00440 NONE
CHC44_RS00435   60459 ..   60475 -  -5.1  -3.89756   ATGCCAAATGAACAA              CAGGC GGAAGAA GCCTG              AGATTATTTTGAGTT  61 29
CHC44_RS00425 NONE
CHC44_RS00420   55090 ..   55105 - -10.4  -4.58395   CGTACCGTTTAAAAA              GGCGTC CGAA GACGCC               TCTGTTTACCGGTTA  89 38
CHC44_RS00415   54633 ..   54649 - -15.1   -3.6959   ATATTATTACTGAAA              GCGCGGC ATT GCCGCGC              CTGCATGTATCATTT 100 35
CHC44_RS00380   47467 ..   47482 -  -4.7  -3.27476   AGGCGGAAGCATTAA              TCCTG GCCCAG CAGGA               AGACGATCACGGTTG  49 32
CHC44_RS00345 NONE
CHC44_RS00340   42082 ..   42100 - -10.2  -5.54907   TGTATAAAATAAAAA             TGCCCGGT AAC ACCGGGCT             TATAAAGACGTGACC 100 42
CHC44_RS00335 NONE
CHC44_RS00330   39353 ..   39371 - -11.7  -4.90917   AAAGGGAATTAAAAA             GGGCGCT GAATG AGCGCCC             CTTAAATTAGAGGAA 100 32
        mscL   38767 ..   38818 - -10.3  -3.09933   CGGTAATCGAGGGAA CTGGGAGGCCAGTGGCAAGAAAGT AAGTA ACTTTTTTACCACTGGCCTT-CTG CTGATTAAGAACGGT  73 30
        hopD   23139 ..   23153 -  -4.3  -3.65415   GCAATCACAAATTAA               GGTTA CCGAT TAACC               GTCTGGAAAGAAAAC  55 20
CHC44_RS00145   22253 ..   22268 - -11.8  -3.14878   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT  83 72
CHC44_RS00090   14371 ..   14385 -  -8.5  -5.24531   ATCGGGCACAAAAAA               GCGGG TTATC CCCGC               TTTTTTTTCGTCTCA  95 38
