locus-tag class description DOE58_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like DOE58_RS00005 IPR013317 Chromosomal replication initiator protein DnaA DOE58_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal DOE58_RS00005 IPR003593 AAA+ ATPase domain DOE58_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00005 IPR038454 DnaA, N-terminal domain superfamily DOE58_RS00005 IPR024633 DnaA N-terminal domain DOE58_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DOE58_RS00005 IPR010921 Trp repressor/replication initiator DOE58_RS00005 IPR001957 Chromosomal replication control, initiator DnaA DOE58_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DOE58_RS00010 IPR001001 DNA polymerase III, beta sliding clamp DOE58_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central DOE58_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DOE58_RS00015 IPR001238 DNA-binding, RecF DOE58_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00015 IPR003395 RecF/RecN/SMC, N-terminal DOE58_RS00015 IPR042174 DNA-binding RecF, domain 2 DOE58_RS00015 IPR018078 DNA-binding, RecF, conserved site DOE58_RS00020 IPR034160 DNA gyrase subunit B, TOPRIM domain DOE58_RS00020 IPR006171 TOPRIM domain DOE58_RS00020 IPR001241 DNA topoisomerase, type IIA DOE58_RS00020 IPR018522 DNA topoisomerase, type IIA, conserved site DOE58_RS00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOE58_RS00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOE58_RS00020 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE58_RS00020 IPR002288 DNA gyrase B subunit, C-terminal DOE58_RS00020 IPR011557 DNA gyrase, subunit B DOE58_RS00020 IPR041423 DNA gyrase subunit B insert domain DOE58_RS00020 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS00025 IPR005119 LysR, substrate-binding DOE58_RS00025 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00025 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00025 IPR000847 Transcription regulator HTH, LysR DOE58_RS00030 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS00030 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS00030 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS00030 IPR029017 Enolase-like, N-terminal DOE58_RS00030 IPR029065 Enolase C-terminal domain-like DOE58_RS00030 IPR034618 D-galactarolactone cycloisomerase DOE58_RS00030 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS00035 IPR020846 Major facilitator superfamily domain DOE58_RS00035 IPR036259 MFS transporter superfamily DOE58_RS00035 IPR011701 Major facilitator superfamily DOE58_RS00035 IPR000849 Sugar phosphate transporter DOE58_RS00040 IPR023214 HAD superfamily DOE58_RS00040 IPR000150 Cof family DOE58_RS00040 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS00040 IPR036412 HAD-like superfamily DOE58_RS00045 IPR000524 Transcription regulator HTH, GntR DOE58_RS00045 IPR011711 GntR, C-terminal DOE58_RS00045 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS00045 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00045 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00050 IPR007729 2-keto-3-deoxy-galactonokinase DOE58_RS00050 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain DOE58_RS00050 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal DOE58_RS00055 IPR000887 KDPG/KHG aldolase DOE58_RS00055 IPR013785 Aldolase-type TIM barrel DOE58_RS00060 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS00060 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS00060 IPR034593 Mandelate racemase-like DOE58_RS00060 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS00060 IPR023592 D-galactonate dehydratase DOE58_RS00060 IPR029065 Enolase C-terminal domain-like DOE58_RS00060 IPR029017 Enolase-like, N-terminal DOE58_RS00060 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS00065 IPR020846 Major facilitator superfamily domain DOE58_RS00065 IPR011701 Major facilitator superfamily DOE58_RS00065 IPR036259 MFS transporter superfamily DOE58_RS00070 IPR011006 CheY-like superfamily DOE58_RS00070 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS00070 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS00070 IPR037952 Sensor histidine kinase TorS, sensor domain DOE58_RS00070 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS00070 IPR005467 Histidine kinase domain DOE58_RS00070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS00070 IPR003660 HAMP domain DOE58_RS00070 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS00070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS00070 IPR036641 HPT domain superfamily DOE58_RS00070 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS00070 IPR038188 TorS, sensor domain superfamily DOE58_RS00075 IPR014301 TMAO reductase system, periplasmic protein TorT DOE58_RS00075 IPR028082 Periplasmic binding protein-like I DOE58_RS00075 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE58_RS00080 IPR011006 CheY-like superfamily DOE58_RS00080 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS00080 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS00080 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00080 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS00085 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK DOE58_RS00085 IPR038266 NapC/NirT cytochrome c superfamily DOE58_RS00085 IPR011031 Multihaem cytochrome DOE58_RS00085 IPR036280 Multiheme cytochrome superfamily DOE58_RS00085 IPR005126 NapC/NirT cytochrome c, N-terminal DOE58_RS00090 IPR011887 Trimethylamine-N-oxide reductase TorA DOE58_RS00090 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS00090 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS00090 IPR006656 Molybdopterin oxidoreductase DOE58_RS00090 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS00090 IPR041460 Molybdopterin oxidoreductase, N-terminal DOE58_RS00090 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain DOE58_RS00090 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase DOE58_RS00090 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS00095 IPR023069 Chaperone TorD DOE58_RS00095 IPR036386 HscB, C-terminal domain superfamily DOE58_RS00095 IPR036411 TorD-like superfamily DOE58_RS00095 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS00100 IPR004852 Di-haem cytochrome c peroxidase DOE58_RS00100 IPR036909 Cytochrome c-like domain superfamily DOE58_RS00100 IPR009056 Cytochrome c-like domain DOE58_RS00100 IPR025992 Haem-binding domain DOE58_RS00105 IPR005895 ABC transporter, haem export, CcmA DOE58_RS00105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00105 IPR017871 ABC transporter, conserved site DOE58_RS00105 IPR003439 ABC transporter-like DOE58_RS00105 IPR003593 AAA+ ATPase domain DOE58_RS00110 IPR003544 Cytochrome c-type biogenesis protein CcmB DOE58_RS00110 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DOE58_RS00115 IPR003557 Cytochrome c-type biogenesis protein CcmC DOE58_RS00115 IPR002541 Cytochrome c assembly protein DOE58_RS00120 IPR007078 Haem exporter protein D (CcmD) DOE58_RS00125 IPR004329 CcmE/CycJ protein DOE58_RS00125 IPR036127 CcmE-like superfamily DOE58_RS00130 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOE58_RS00130 IPR002541 Cytochrome c assembly protein DOE58_RS00130 IPR003567 Cytochrome c-type biogenesis protein DOE58_RS00130 IPR003568 Cytochrome c-type biogenesis protein CcmF DOE58_RS00135 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE DOE58_RS00135 IPR013766 Thioredoxin domain DOE58_RS00135 IPR017937 Thioredoxin, conserved site DOE58_RS00135 IPR036249 Thioredoxin-like superfamily DOE58_RS00135 IPR013740 Redoxin DOE58_RS00140 IPR005616 CcmH/CycL/Ccl2/NrfF family DOE58_RS00140 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS00140 IPR019734 Tetratricopeptide repeat DOE58_RS00140 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOE58_RS00140 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS00145 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS00145 IPR022223 Protein of unknown function DUF3748 DOE58_RS00145 IPR011659 WD40-like Beta Propeller DOE58_RS00150 IPR010780 Protein of unknown function DUF1375 DOE58_RS00155 IPR023728 Small heat shock protein IbpA DOE58_RS00155 IPR008978 HSP20-like chaperone DOE58_RS00155 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE58_RS00155 IPR002068 Alpha crystallin/Hsp20 domain DOE58_RS00160 IPR022848 Small heat shock protein IbpB DOE58_RS00160 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE58_RS00160 IPR008978 HSP20-like chaperone DOE58_RS00160 IPR002068 Alpha crystallin/Hsp20 domain DOE58_RS00165 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE58_RS00165 IPR006037 Regulator of K+ conductance, C-terminal DOE58_RS00165 IPR023018 Transport protein YidE, putative DOE58_RS00165 IPR006512 YidE/YbjL duplication DOE58_RS00170 IPR003807 Domain of unknown function DUF202 DOE58_RS00175 IPR003807 Domain of unknown function DUF202 DOE58_RS00180 IPR013785 Aldolase-type TIM barrel DOE58_RS00185 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE58_RS00185 IPR011780 D-serine ammonia-lyase DOE58_RS00185 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS00185 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS00190 IPR003474 Gluconate transporter DOE58_RS00195 IPR005119 LysR, substrate-binding DOE58_RS00195 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00195 IPR000847 Transcription regulator HTH, LysR DOE58_RS00195 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00195 IPR011781 D-serine deaminase transcriptional activator DOE58_RS00205 IPR004734 Multidrug resistance protein DOE58_RS00205 IPR011701 Major facilitator superfamily DOE58_RS00205 IPR020846 Major facilitator superfamily domain DOE58_RS00205 IPR036259 MFS transporter superfamily DOE58_RS00215 IPR025211 Toxin TisB, type I toxin-antitoxin system DOE58_RS00230 IPR012566 IlvB leader peptide DOE58_RS00235 IPR000399 TPP-binding enzyme, conserved site DOE58_RS00235 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS00235 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS00235 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE58_RS00235 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE58_RS00235 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS00235 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE58_RS00235 IPR029061 Thiamin diphosphate-binding fold DOE58_RS00240 IPR002912 ACT domain DOE58_RS00240 IPR039557 AHAS, ACT domain DOE58_RS00240 IPR004789 Acetolactate synthase, small subunit DOE58_RS00245 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS00245 IPR037171 NagB/RpiA transferase-like DOE58_RS00245 IPR014036 DeoR C-terminal sensor domain DOE58_RS00245 IPR001034 DeoR-type HTH domain DOE58_RS00250 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS00250 IPR002139 Ribokinase/fructokinase DOE58_RS00250 IPR029056 Ribokinase-like DOE58_RS00250 IPR011611 Carbohydrate kinase PfkB DOE58_RS00250 IPR011877 Ribokinase DOE58_RS00255 IPR011701 Major facilitator superfamily DOE58_RS00255 IPR020846 Major facilitator superfamily domain DOE58_RS00255 IPR036259 MFS transporter superfamily DOE58_RS00255 IPR005275 L-fucose permease FucP DOE58_RS00265 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS00265 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS00265 IPR011006 CheY-like superfamily DOE58_RS00265 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS00270 IPR007895 MASE1 DOE58_RS00270 IPR005467 Histidine kinase domain DOE58_RS00270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS00270 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS00270 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE58_RS00275 IPR000849 Sugar phosphate transporter DOE58_RS00275 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE58_RS00275 IPR020846 Major facilitator superfamily domain DOE58_RS00275 IPR036259 MFS transporter superfamily DOE58_RS00275 IPR011701 Major facilitator superfamily DOE58_RS00280 IPR020846 Major facilitator superfamily domain DOE58_RS00280 IPR011701 Major facilitator superfamily DOE58_RS00280 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE58_RS00280 IPR000849 Sugar phosphate transporter DOE58_RS00280 IPR036259 MFS transporter superfamily DOE58_RS00285 IPR009587 Protein of unknown function DUF1198 DOE58_RS00290 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS00290 IPR011663 UbiC transcription regulator-associated DOE58_RS00290 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00290 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00290 IPR000524 Transcription regulator HTH, GntR DOE58_RS00295 IPR036634 PRD domain superfamily DOE58_RS00295 IPR013196 Helix-turn-helix, type 11 DOE58_RS00295 IPR007737 Mga helix-turn-helix domain DOE58_RS00295 IPR036095 PTS system IIB component-like superfamily DOE58_RS00295 IPR011608 PRD domain DOE58_RS00295 IPR016152 Phosphotransferase/anion transporter DOE58_RS00295 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00295 IPR002178 PTS EIIA type-2 domain DOE58_RS00295 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS00300 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS00300 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS00300 IPR036095 PTS system IIB component-like superfamily DOE58_RS00305 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS00305 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS00305 IPR013853 Galactitol permease IIC component DOE58_RS00315 IPR013785 Aldolase-type TIM barrel DOE58_RS00315 IPR000771 Fructose-bisphosphate aldolase, class-II DOE58_RS00315 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 DOE58_RS00340 IPR011701 Major facilitator superfamily DOE58_RS00340 IPR036259 MFS transporter superfamily DOE58_RS00340 IPR023680 Purine ribonucleoside efflux pump, NepI DOE58_RS00340 IPR020846 Major facilitator superfamily domain DOE58_RS00345 IPR018120 Glycoside hydrolase family 1, active site DOE58_RS00345 IPR017853 Glycoside hydrolase superfamily DOE58_RS00345 IPR001360 Glycoside hydrolase family 1 DOE58_RS00355 IPR036634 PRD domain superfamily DOE58_RS00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00355 IPR004701 Phosphotransferase system, mannose-type IIA component DOE58_RS00355 IPR003593 AAA+ ATPase domain DOE58_RS00355 IPR011608 PRD domain DOE58_RS00355 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE58_RS00355 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS00365 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE58_RS00365 IPR013789 Phosphotransferase system, mannose family IIA component DOE58_RS00365 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE58_RS00365 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE58_RS00365 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE58_RS00365 IPR004701 Phosphotransferase system, mannose-type IIA component DOE58_RS00365 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup DOE58_RS00370 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit DOE58_RS00375 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE58_RS00380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS00380 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS00380 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like DOE58_RS00380 IPR018319 L-seryl-tRNA selenium transferase-like DOE58_RS00385 IPR013785 Aldolase-type TIM barrel DOE58_RS00385 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase DOE58_RS00390 IPR006842 Transposase (putative), YhgA-like DOE58_RS00390 IPR010106 Recombination-promoting nuclease RpnA DOE58_RS00395 IPR000620 EamA domain DOE58_RS00400 IPR003416 MgtC/SapB/SrpB/YhiD family DOE58_RS00405 IPR006068 Cation-transporting P-type ATPase, C-terminal DOE58_RS00405 IPR001757 P-type ATPase DOE58_RS00405 IPR006415 P-type ATPase, subfamily IIIB DOE58_RS00405 IPR023214 HAD superfamily DOE58_RS00405 IPR036412 HAD-like superfamily DOE58_RS00405 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS00405 IPR018303 P-type ATPase, phosphorylation site DOE58_RS00405 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS00405 IPR008250 P-type ATPase, A domain superfamily DOE58_RS00405 IPR004014 Cation-transporting P-type ATPase, N-terminal DOE58_RS00420 IPR000868 Isochorismatase-like DOE58_RS00420 IPR036380 Isochorismatase-like superfamily DOE58_RS00430 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00430 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS00430 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS00440 IPR011050 Pectin lyase fold/virulence factor DOE58_RS00440 IPR012332 P22 tailspike-like, C-terminal domain superfamily DOE58_RS00440 IPR006315 Outer membrane autotransporter barrel DOE58_RS00440 IPR005546 Autotransporter beta-domain DOE58_RS00440 IPR036709 Autotransporter beta-domain superfamily DOE58_RS00445 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS00445 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS00470 IPR003959 ATPase, AAA-type, core DOE58_RS00470 IPR013134 RAD50, zinc hook DOE58_RS00470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00470 IPR029012 Helix hairpin bin domain superfamily DOE58_RS00490 IPR036259 MFS transporter superfamily DOE58_RS00490 IPR039672 Lactose permease-like DOE58_RS00490 IPR001927 Sodium:galactoside symporter DOE58_RS00490 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS00495 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS00495 IPR025887 Glycoside hydrolase family 31, N-terminal domain DOE58_RS00495 IPR017853 Glycoside hydrolase superfamily DOE58_RS00495 IPR000322 Glycoside hydrolase family 31 DOE58_RS00495 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS00500 IPR007844 AsmA DOE58_RS00505 IPR006043 Xanthine/uracil/vitamin C permease DOE58_RS00505 IPR006042 Xanthine/uracil permease DOE58_RS00510 IPR004445 Sodium/glutamate symport carrier protein GltS DOE58_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00515 IPR011545 DEAD/DEAH box helicase domain DOE58_RS00515 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS00515 IPR001650 Helicase, C-terminal DOE58_RS00515 IPR004609 ATP-dependent DNA helicase RecG DOE58_RS00515 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS00515 IPR033454 RecG, wedge domain DOE58_RS00520 IPR029028 Alpha/beta knot methyltransferases DOE58_RS00520 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal DOE58_RS00520 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS00520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS00520 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase DOE58_RS00525 IPR007685 RelA/SpoT DOE58_RS00525 IPR012675 Beta-grasp domain superfamily DOE58_RS00525 IPR004095 TGS DOE58_RS00525 IPR003607 HD/PDEase domain DOE58_RS00525 IPR004811 RelA/SpoT family DOE58_RS00525 IPR012676 TGS-like DOE58_RS00525 IPR033655 RelA, TGS domain DOE58_RS00525 IPR002912 ACT domain DOE58_RS00530 IPR006110 RNA polymerase, subunit omega/K/RPB6 DOE58_RS00530 IPR036161 RPB6/omega subunit-like superfamily DOE58_RS00530 IPR012293 RNA polymerase subunit, RPB6/omega DOE58_RS00530 IPR003716 DNA-directed RNA polymerase, omega subunit DOE58_RS00535 IPR017665 Guanylate kinase DOE58_RS00535 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE58_RS00535 IPR008144 Guanylate kinase-like domain DOE58_RS00535 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00535 IPR020590 Guanylate kinase, conserved site DOE58_RS00540 IPR013839 NAD-dependent DNA ligase, adenylation DOE58_RS00540 IPR033136 NAD-dependent DNA ligase, conserved site DOE58_RS00540 IPR020923 DNA ligase B DOE58_RS00540 IPR018239 NAD-dependent DNA ligase, active site DOE58_RS00540 IPR010994 RuvA domain 2-like DOE58_RS00540 IPR004150 NAD-dependent DNA ligase, OB-fold DOE58_RS00540 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS00540 IPR013840 NAD-dependent DNA ligase, N-terminal DOE58_RS00545 IPR005115 Uncharacterised domain UPF0126 DOE58_RS00555 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00555 IPR005119 LysR, substrate-binding DOE58_RS00555 IPR000847 Transcription regulator HTH, LysR DOE58_RS00555 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00560 IPR013527 YicC-like, N-terminal DOE58_RS00560 IPR013551 Domain of unknown function DUF1732 DOE58_RS00560 IPR005229 Conserved hypothetical protein CHP00255 DOE58_RS00570 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOE58_RS00570 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOE58_RS00570 IPR036345 Exoribonuclease, PH domain 2 superfamily DOE58_RS00570 IPR027408 PNPase/RNase PH domain superfamily DOE58_RS00570 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS00570 IPR002381 Ribonuclease PH, bacterial-type DOE58_RS00570 IPR018336 Ribonuclease PH, conserved site DOE58_RS00575 IPR029057 Phosphoribosyltransferase-like DOE58_RS00575 IPR000836 Phosphoribosyltransferase domain DOE58_RS00575 IPR004467 Orotate phosphoribosyl transferase domain DOE58_RS00575 IPR023031 Orotate phosphoribosyltransferase DOE58_RS00580 IPR023769 Nucleoid occlusion factor SlmA DOE58_RS00580 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS00580 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS00580 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS00580 IPR009057 Homeobox-like domain superfamily DOE58_RS00585 IPR029054 dUTPase-like DOE58_RS00585 IPR036157 dUTPase-like superfamily DOE58_RS00585 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DOE58_RS00585 IPR033704 dUTPase, trimeric DOE58_RS00590 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DOE58_RS00590 IPR003382 Flavoprotein DOE58_RS00590 IPR036551 Flavin prenyltransferase-like DOE58_RS00590 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DOE58_RS00590 IPR035929 CoaB-like superfamily DOE58_RS00595 IPR025657 RadC-like JAB domain DOE58_RS00595 IPR010994 RuvA domain 2-like DOE58_RS00595 IPR001405 Uncharacterised protein family UPF0758 DOE58_RS00595 IPR037518 MPN domain DOE58_RS00595 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily DOE58_RS00595 IPR020891 Uncharacterised protein family UPF0758, conserved site DOE58_RS00600 IPR026569 Ribosomal protein L28/L24 DOE58_RS00600 IPR034704 L28p-like DOE58_RS00600 IPR001383 Ribosomal protein L28 DOE58_RS00600 IPR037147 Ribosomal protein L28/L24 superfamily DOE58_RS00605 IPR011332 Zinc-binding ribosomal protein DOE58_RS00605 IPR001705 Ribosomal protein L33 DOE58_RS00605 IPR038584 Ribosomal protein L33 superfamily DOE58_RS00605 IPR018264 Ribosomal protein L33, conserved site DOE58_RS00610 IPR010979 Ribosomal protein S13-like, H2TH DOE58_RS00610 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DOE58_RS00610 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DOE58_RS00610 IPR035937 MutM-like, N-terminal DOE58_RS00610 IPR020629 Formamidopyrimidine-DNA glycosylase DOE58_RS00610 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DOE58_RS00610 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DOE58_RS00610 IPR010663 Zinc finger, FPG/IleRS-type DOE58_RS00615 IPR001980 Phosphopantetheine adenylyltransferase DOE58_RS00615 IPR004821 Cytidyltransferase-like domain DOE58_RS00615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS00620 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily DOE58_RS00620 IPR039901 3-deoxy-D-manno-octulosonic acid transferase DOE58_RS00620 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DOE58_RS00625 IPR011916 Lipopolysaccharide heptosyltransferase III, putative DOE58_RS00625 IPR002201 Glycosyl transferase, family 9 DOE58_RS00630 IPR001296 Glycosyl transferase, family 1 DOE58_RS00630 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS00635 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP DOE58_RS00635 IPR011009 Protein kinase-like domain superfamily DOE58_RS00640 IPR012477 Glycosyltransferase family 52 DOE58_RS00645 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS00645 IPR001296 Glycosyl transferase, family 1 DOE58_RS00650 IPR002495 Glycosyl transferase, family 8 DOE58_RS00650 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS00650 IPR013645 Glycosyl transferase, family 8, C-terminal DOE58_RS00655 IPR002495 Glycosyl transferase, family 8 DOE58_RS00655 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS00655 IPR013645 Glycosyl transferase, family 8, C-terminal DOE58_RS00660 IPR011009 Protein kinase-like domain superfamily DOE58_RS00660 IPR009330 Lipopolysaccharide core heptose(II) kinase DOE58_RS00665 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ DOE58_RS00670 IPR001296 Glycosyl transferase, family 1 DOE58_RS00675 IPR007016 O-antigen ligase-related DOE58_RS00680 IPR002201 Glycosyl transferase, family 9 DOE58_RS00680 IPR011908 Lipopolysaccharide heptosyltransferase I DOE58_RS00685 IPR002201 Glycosyl transferase, family 9 DOE58_RS00685 IPR011910 ADP-heptose--LPS heptosyltransferase 2 DOE58_RS00690 IPR036291 NAD(P)-binding domain superfamily DOE58_RS00690 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS00690 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DOE58_RS00695 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase DOE58_RS00695 IPR004839 Aminotransferase, class I/classII DOE58_RS00695 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS00695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS00695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS00695 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE58_RS00700 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS00700 IPR004627 L-threonine 3-dehydrogenase DOE58_RS00700 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS00700 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS00700 IPR036291 NAD(P)-binding domain superfamily DOE58_RS00700 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS00700 IPR011032 GroES-like superfamily DOE58_RS00705 IPR001173 Glycosyltransferase 2-like DOE58_RS00705 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS00710 IPR006837 Divergent polysaccharide deacetylase DOE58_RS00710 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS00715 IPR016047 Peptidase M23 DOE58_RS00715 IPR011055 Duplicated hybrid motif DOE58_RS00720 IPR006124 Metalloenzyme DOE58_RS00720 IPR011258 BPG-independent PGAM, N-terminal DOE58_RS00720 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS00720 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily DOE58_RS00720 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent DOE58_RS00725 IPR001763 Rhodanese-like domain DOE58_RS00725 IPR036873 Rhodanese-like domain superfamily DOE58_RS00730 IPR036249 Thioredoxin-like superfamily DOE58_RS00730 IPR011900 Glutaredoxin, GrxC DOE58_RS00730 IPR002109 Glutaredoxin DOE58_RS00730 IPR011767 Glutaredoxin active site DOE58_RS00730 IPR014025 Glutaredoxin subgroup DOE58_RS00735 IPR035958 SecB-like superfamily DOE58_RS00735 IPR003708 Bacterial protein export chaperone SecB DOE58_RS00740 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS00740 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DOE58_RS00740 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DOE58_RS00740 IPR036291 NAD(P)-binding domain superfamily DOE58_RS00740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS00740 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DOE58_RS00745 IPR011004 Trimeric LpxA-like superfamily DOE58_RS00745 IPR005881 Serine O-acetyltransferase DOE58_RS00745 IPR001451 Hexapeptide repeat DOE58_RS00745 IPR018357 Hexapeptide transferase, conserved site DOE58_RS00745 IPR010493 Serine acetyltransferase, N-terminal DOE58_RS00745 IPR042122 Serine acetyltransferase, N-terminal domain superfamily DOE58_RS00750 IPR029028 Alpha/beta knot methyltransferases DOE58_RS00750 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DOE58_RS00750 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS00750 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS00755 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site DOE58_RS00755 IPR037396 FMN hydroxy acid dehydrogenase domain DOE58_RS00755 IPR000262 FMN-dependent dehydrogenase DOE58_RS00755 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DOE58_RS00755 IPR013785 Aldolase-type TIM barrel DOE58_RS00755 IPR020920 L-lactate dehydrogenase, bacterial DOE58_RS00760 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00760 IPR000524 Transcription regulator HTH, GntR DOE58_RS00760 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00760 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS00760 IPR011711 GntR, C-terminal DOE58_RS00765 IPR003804 L-lactate permease DOE58_RS00770 IPR008640 Head domain of trimeric autotransporter adhesin DOE58_RS00770 IPR008635 Coiled stalk of trimeric autotransporter adhesin DOE58_RS00770 IPR024973 ESPR domain DOE58_RS00770 IPR011049 Serralysin-like metalloprotease, C-terminal DOE58_RS00770 IPR005594 YadA-like, C-terminal DOE58_RS00775 IPR021658 Domain of unknown function DUF3251 DOE58_RS00775 IPR037125 Lipoprotein YajI-like superfamily DOE58_RS00785 IPR021230 Protein of unknown function DUF2810 DOE58_RS00795 IPR038026 MtlR-like superfamily DOE58_RS00795 IPR007761 Mannitol repressor MtlR-like DOE58_RS00800 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS00800 IPR036291 NAD(P)-binding domain superfamily DOE58_RS00800 IPR013131 Mannitol dehydrogenase, N-terminal DOE58_RS00800 IPR023027 Mannitol dehydrogenase, conserved site DOE58_RS00800 IPR000669 Mannitol dehydrogenase DOE58_RS00800 IPR023028 Mannitol-1-phosphate 5-dehydrogenase DOE58_RS00800 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS00800 IPR013118 Mannitol dehydrogenase, C-terminal DOE58_RS00805 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC DOE58_RS00805 IPR003352 Phosphotransferase system, EIIC DOE58_RS00805 IPR029503 Phosphotransferase system EIIB component, mannitol-specific DOE58_RS00805 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS00805 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS00805 IPR036095 PTS system IIB component-like superfamily DOE58_RS00805 IPR002178 PTS EIIA type-2 domain DOE58_RS00805 IPR016152 Phosphotransferase/anion transporter DOE58_RS00805 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS00810 IPR036249 Thioredoxin-like superfamily DOE58_RS00810 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS00810 IPR034343 Uncharacterized GST-like protein YibF DOE58_RS00810 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS00810 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS00810 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS00815 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain DOE58_RS00815 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS00815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS00815 IPR018319 L-seryl-tRNA selenium transferase-like DOE58_RS00815 IPR004534 L-seryl-tRNA(Sec) selenium transferase DOE58_RS00820 IPR031157 Tr-type G domain, conserved site DOE58_RS00820 IPR015191 Translation elongation factor SelB, winged helix, type 3 DOE58_RS00820 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS00820 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE58_RS00820 IPR000795 Transcription factor, GTP-binding domain DOE58_RS00820 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00820 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS00820 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS00820 IPR015190 Translation elongation factor SelB, winged helix, type 2 DOE58_RS00820 IPR004535 Translation elongation factor, selenocysteine-specific DOE58_RS00825 IPR000600 ROK family DOE58_RS00830 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS00830 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS00830 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS00830 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS00830 IPR015590 Aldehyde dehydrogenase domain DOE58_RS00830 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS00835 IPR012878 Beta-L-arabinofuranosidase, GH127 DOE58_RS00835 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS00845 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS00845 IPR004661 L-ribulose-5-phosphate 4-epimerase DOE58_RS00845 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS00850 IPR001719 AP endonuclease 2 DOE58_RS00850 IPR004560 L-ribulose-5-phosphate 3-epimerase DOE58_RS00850 IPR036237 Xylose isomerase-like superfamily DOE58_RS00850 IPR013022 Xylose isomerase-like, TIM barrel domain DOE58_RS00855 IPR011060 Ribulose-phosphate binding barrel DOE58_RS00855 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE58_RS00855 IPR041710 HPS/KGPDC domain DOE58_RS00855 IPR013785 Aldolase-type TIM barrel DOE58_RS00860 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS00860 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE58_RS00860 IPR000577 Carbohydrate kinase, FGGY DOE58_RS00860 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS00865 IPR018389 TRAP transporter solute receptor DctP/TeaA DOE58_RS00865 IPR004682 TRAP transporter solute receptor, DctP family DOE58_RS00865 IPR038404 TRAP transporter solute receptor DctP superfamily DOE58_RS00870 IPR004681 TRAP transporter large membrane protein DctM DOE58_RS00870 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE58_RS00875 IPR007387 TRAP transporter, small membrane protein DctQ DOE58_RS00880 IPR036237 Xylose isomerase-like superfamily DOE58_RS00880 IPR032344 Protein of unknown function DUF4862 DOE58_RS00885 IPR004375 YhcH/YjgK/YiaL family DOE58_RS00885 IPR037012 YhcH/YjgK/YiaL superfamily DOE58_RS00890 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily DOE58_RS00890 IPR023689 2,3-diketo-L-gulonate reductase DOE58_RS00890 IPR003767 Malate/L-lactate dehydrogenase-like DOE58_RS00895 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS00895 IPR005471 Transcription regulator IclR, N-terminal DOE58_RS00895 IPR014757 Transcription regulator IclR, C-terminal DOE58_RS00895 IPR029016 GAF-like domain superfamily DOE58_RS00895 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS00900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS00900 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS00905 IPR004839 Aminotransferase, class I/classII DOE58_RS00905 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS00905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS00910 IPR017853 Glycoside hydrolase superfamily DOE58_RS00910 IPR014635 Alpha-amylase, MalS type DOE58_RS00910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS00915 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DOE58_RS00920 IPR018062 HTH domain AraC-type, conserved site DOE58_RS00920 IPR028082 Periplasmic binding protein-like I DOE58_RS00920 IPR009057 Homeobox-like domain superfamily DOE58_RS00920 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS00920 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS00930 IPR036237 Xylose isomerase-like superfamily DOE58_RS00930 IPR013452 Xylose isomerase, bacterial-type DOE58_RS00930 IPR001998 Xylose isomerase DOE58_RS00935 IPR000577 Carbohydrate kinase, FGGY DOE58_RS00935 IPR006000 Xylulokinase DOE58_RS00935 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE58_RS00935 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS00935 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS00940 IPR008024 YiaAB two helix DOE58_RS00940 IPR038972 Inner membrane protein YiaA-like DOE58_RS00945 IPR032905 O-acetyltransferase WecH DOE58_RS00945 IPR002656 Acyltransferase 3 DOE58_RS00955 IPR025728 YsaB-like lipoprotein DOE58_RS00960 IPR002310 Glycine-tRNA ligase, alpha subunit DOE58_RS00960 IPR006194 Glycine-tRNA synthetase, heterodimeric DOE58_RS00965 IPR006194 Glycine-tRNA synthetase, heterodimeric DOE58_RS00965 IPR015944 Glycine-tRNA ligase, beta subunit DOE58_RS00965 IPR008909 DALR anticodon binding DOE58_RS00970 IPR038965 Transposase InsF-like DOE58_RS00970 IPR036397 Ribonuclease H superfamily DOE58_RS00970 IPR025948 HTH-like domain DOE58_RS00970 IPR012337 Ribonuclease H-like superfamily DOE58_RS00970 IPR001584 Integrase, catalytic core DOE58_RS01010 IPR011129 Cold shock domain DOE58_RS01010 IPR012156 Cold shock, CspA DOE58_RS01010 IPR019844 Cold-shock (CSD) domain DOE58_RS01010 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS01010 IPR002059 Cold-shock protein, DNA-binding DOE58_RS01015 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS01015 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS01020 IPR021413 Protein of unknown function DUF3053 DOE58_RS01025 IPR023756 Glyoxylate/hydroxypyruvate reductase B DOE58_RS01025 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE58_RS01025 IPR036291 NAD(P)-binding domain superfamily DOE58_RS01025 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE58_RS01025 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE58_RS01030 IPR039567 Glycine zipper domain DOE58_RS01030 IPR006664 Outer membrane protein, bacterial DOE58_RS01030 IPR006665 OmpA-like domain DOE58_RS01030 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE58_RS01030 IPR036737 OmpA-like domain superfamily DOE58_RS01035 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain DOE58_RS01035 IPR041460 Molybdopterin oxidoreductase, N-terminal DOE58_RS01035 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS01035 IPR006656 Molybdopterin oxidoreductase DOE58_RS01035 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS01035 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS01035 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase DOE58_RS01040 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS01040 IPR000182 GNAT domain DOE58_RS01045 IPR005019 Methyladenine glycosylase DOE58_RS01045 IPR004597 DNA-3-methyladenine glycosylase I DOE58_RS01045 IPR011257 DNA glycosylase DOE58_RS01050 IPR016955 Autotransporter, YhjY, predicted DOE58_RS01050 IPR036709 Autotransporter beta-domain superfamily DOE58_RS01050 IPR005546 Autotransporter beta-domain DOE58_RS01050 IPR006315 Outer membrane autotransporter barrel DOE58_RS01055 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS01055 IPR040423 Phosphoethanolamine transferase DOE58_RS01055 IPR000917 Sulfatase, N-terminal DOE58_RS01055 IPR012549 Phosphoethanolamine transferase, N-terminal DOE58_RS01095 IPR028082 Periplasmic binding protein-like I DOE58_RS01095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS01095 IPR000843 LacI-type HTH domain DOE58_RS01105 IPR017588 Uric acid permease UacT-like DOE58_RS01105 IPR006042 Xanthine/uracil permease DOE58_RS01105 IPR006043 Xanthine/uracil/vitamin C permease DOE58_RS01110 IPR023765 Solute-binding protein family 5, conserved site DOE58_RS01110 IPR000914 Solute-binding protein family 5 domain DOE58_RS01110 IPR039424 Solute-binding protein family 5 DOE58_RS01110 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS01115 IPR035906 MetI-like superfamily DOE58_RS01115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS01120 IPR035906 MetI-like superfamily DOE58_RS01120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS01120 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS01125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01125 IPR003439 ABC transporter-like DOE58_RS01125 IPR017871 ABC transporter, conserved site DOE58_RS01125 IPR003593 AAA+ ATPase domain DOE58_RS01125 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS01130 IPR017871 ABC transporter, conserved site DOE58_RS01130 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS01130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01130 IPR003593 AAA+ ATPase domain DOE58_RS01130 IPR003439 ABC transporter-like DOE58_RS01135 IPR018227 Amino acid/polyamine transporter 2 DOE58_RS01145 IPR025253 Type I toxin-antitoxin system, toxin Ldr DOE58_RS01150 IPR017744 Cellulose biosynthesis protein BcsG DOE58_RS01155 IPR019995 Cellulose biosynthesis, BcsF/YhjT DOE58_RS01160 IPR017745 Cellulose biosynthesis protein BcsE DOE58_RS01165 IPR024487 Protein YhjR DOE58_RS01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01170 IPR017746 Cellulose synthase operon protein BcsQ DOE58_RS01175 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS01175 IPR001173 Glycosyltransferase 2-like DOE58_RS01175 IPR003919 Cellulose synthase, subunit A DOE58_RS01175 IPR009875 PilZ domain DOE58_RS01180 IPR018513 Cellulose synthase BcsB, bacterial DOE58_RS01180 IPR008979 Galactose-binding-like domain superfamily DOE58_RS01180 IPR003920 Cellulose synthase, subunit B DOE58_RS01185 IPR002037 Glycoside hydrolase, family 8 DOE58_RS01185 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS01185 IPR019834 Glycoside hydrolase, family 8, conserved site DOE58_RS01185 IPR012341 Six-hairpin glycosidase-like superfamily DOE58_RS01190 IPR008410 Cellulose synthase operon C, C-terminal DOE58_RS01190 IPR019734 Tetratricopeptide repeat DOE58_RS01190 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS01190 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS01200 IPR029787 Nucleotide cyclase DOE58_RS01200 IPR001633 EAL domain DOE58_RS01200 IPR035919 EAL domain superfamily DOE58_RS01200 IPR003660 HAMP domain DOE58_RS01200 IPR000160 GGDEF domain DOE58_RS01200 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 DOE58_RS01205 IPR036458 Sodium:dicarboxylate symporter superfamily DOE58_RS01205 IPR023954 C4-dicarboxylate transport protein DOE58_RS01205 IPR001991 Sodium:dicarboxylate symporter DOE58_RS01205 IPR018107 Sodium:dicarboxylate symporter, conserved site DOE58_RS01210 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE58_RS01210 IPR007863 Peptidase M16, C-terminal DOE58_RS01210 IPR011765 Peptidase M16, N-terminal DOE58_RS01215 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS01215 IPR011611 Carbohydrate kinase PfkB DOE58_RS01215 IPR029056 Ribokinase-like DOE58_RS01220 IPR001633 EAL domain DOE58_RS01220 IPR035919 EAL domain superfamily DOE58_RS01225 IPR007844 AsmA DOE58_RS01230 IPR020846 Major facilitator superfamily domain DOE58_RS01230 IPR005828 Major facilitator, sugar transporter-like DOE58_RS01230 IPR011701 Major facilitator superfamily DOE58_RS01230 IPR036259 MFS transporter superfamily DOE58_RS01230 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS01230 IPR005829 Sugar transporter, conserved site DOE58_RS01235 IPR005274 Inner membrane protein YhjD DOE58_RS01235 IPR017039 Virulence factor BrkB DOE58_RS01240 IPR005119 LysR, substrate-binding DOE58_RS01240 IPR000847 Transcription regulator HTH, LysR DOE58_RS01240 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01240 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01260 IPR012341 Six-hairpin glycosidase-like superfamily DOE58_RS01260 IPR001661 Glycoside hydrolase, family 37 DOE58_RS01260 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS01260 IPR018232 Glycoside hydrolase, family 37, conserved site DOE58_RS01260 IPR023715 Trehalase, cytoplasmic DOE58_RS01265 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01265 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS01265 IPR000524 Transcription regulator HTH, GntR DOE58_RS01265 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01265 IPR011663 UbiC transcription regulator-associated DOE58_RS01270 IPR001347 Sugar isomerase (SIS) DOE58_RS01270 IPR035490 GlmS/FrlB, SIS domain 2 DOE58_RS01270 IPR024713 Fructosamine deglycase FrlB DOE58_RS01270 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 DOE58_RS01275 IPR029056 Ribokinase-like DOE58_RS01275 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS01275 IPR011611 Carbohydrate kinase PfkB DOE58_RS01280 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE58_RS01285 IPR027474 L-asparaginase, N-terminal DOE58_RS01285 IPR027475 Asparaginase/glutaminase, active site 2 DOE58_RS01285 IPR027473 L-asparaginase, C-terminal DOE58_RS01285 IPR040919 Asparaginase/glutaminase, C-terminal DOE58_RS01285 IPR036152 Asparaginase/glutaminase-like superfamily DOE58_RS01285 IPR037152 L-asparaginase, N-terminal domain superfamily DOE58_RS01285 IPR004550 L-asparaginase, type II DOE58_RS01285 IPR020827 Asparaginase/glutaminase, active site 1 DOE58_RS01285 IPR006034 Asparaginase/glutaminase-like DOE58_RS01290 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE58_RS01290 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE58_RS01290 IPR006322 Glutathione reductase, eukaryote/bacterial DOE58_RS01290 IPR023753 FAD/NAD(P)-binding domain DOE58_RS01290 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS01290 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE58_RS01290 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE58_RS01295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS01295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS01295 IPR007473 Ribosomal RNA large subunit methyltransferase J DOE58_RS01300 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE58_RS01300 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE58_RS01300 IPR033879 Undecaprenyl-diphosphatase DOE58_RS01305 IPR001567 Peptidase M3A/M3B catalytic domain DOE58_RS01305 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOE58_RS01310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS01310 IPR007536 Ribosomal RNA small subunit methyltransferase J DOE58_RS01315 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B DOE58_RS01315 IPR005279 Dipeptide/tripeptide permease DOE58_RS01315 IPR036259 MFS transporter superfamily DOE58_RS01315 IPR000109 Proton-dependent oligopeptide transporter family DOE58_RS01315 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE58_RS01320 IPR006016 UspA DOE58_RS01320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS01320 IPR006015 Universal stress protein A family DOE58_RS01325 IPR019598 Universal stress protein B DOE58_RS01330 IPR001204 Phosphate transporter DOE58_RS01335 IPR023166 HI0933-like insert domain superfamily DOE58_RS01335 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS01335 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like DOE58_RS01340 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE58_RS01345 IPR003593 AAA+ ATPase domain DOE58_RS01345 IPR017871 ABC transporter, conserved site DOE58_RS01345 IPR003439 ABC transporter-like DOE58_RS01345 IPR000412 ABC-2 transporter DOE58_RS01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01350 IPR000412 ABC-2 transporter DOE58_RS01355 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria DOE58_RS01355 IPR013321 Arc-type ribbon-helix-helix DOE58_RS01355 IPR022988 Nickel-responsive transcriptional regulator NikR DOE58_RS01355 IPR010985 Ribbon-helix-helix DOE58_RS01355 IPR014864 Transcription factor, NikR, nickel binding C-terminal DOE58_RS01355 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DOE58_RS01355 IPR002145 Ribbon-helix-helix protein, CopG DOE58_RS01360 IPR008278 4'-phosphopantetheinyl transferase domain DOE58_RS01360 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE58_RS01365 IPR002549 Transmembrane protein TqsA-like DOE58_RS01370 IPR036259 MFS transporter superfamily DOE58_RS01370 IPR023008 Uncharacterized MFS-type transporter YhhS-like DOE58_RS01370 IPR020846 Major facilitator superfamily domain DOE58_RS01370 IPR011701 Major facilitator superfamily DOE58_RS01375 IPR014894 Protein DcrB DOE58_RS01375 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich DOE58_RS01380 IPR003744 Queuosine precursor transporter DOE58_RS01385 IPR022931 Sulfur carrier protein TusA DOE58_RS01385 IPR036868 TusA-like domain superfamily DOE58_RS01385 IPR001455 TusA-like domain DOE58_RS01390 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS01390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS01390 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS01390 IPR003660 HAMP domain DOE58_RS01390 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS01390 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS01395 IPR008250 P-type ATPase, A domain superfamily DOE58_RS01395 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS01395 IPR018303 P-type ATPase, phosphorylation site DOE58_RS01395 IPR036412 HAD-like superfamily DOE58_RS01395 IPR017969 Heavy-metal-associated, conserved site DOE58_RS01395 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS01395 IPR001757 P-type ATPase DOE58_RS01395 IPR027256 P-type ATPase, subfamily IB DOE58_RS01395 IPR006121 Heavy metal-associated domain, HMA DOE58_RS01395 IPR036163 Heavy metal-associated domain superfamily DOE58_RS01395 IPR023214 HAD superfamily DOE58_RS01400 IPR012506 YhhN-like DOE58_RS01405 IPR019635 Protein of unknown function DUF2500 DOE58_RS01410 IPR009525 Protein of unknown function DUF1145 DOE58_RS01415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS01415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS01415 IPR004398 RNA methyltransferase, RsmD DOE58_RS01420 IPR013822 Signal recognition particle SRP54, helical bundle DOE58_RS01420 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOE58_RS01420 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOE58_RS01420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01420 IPR004390 Signal-recognition particle receptor FtsY DOE58_RS01420 IPR003593 AAA+ ATPase domain DOE58_RS01420 IPR036225 SRP/SRP receptor, N-terminal DOE58_RS01425 IPR017871 ABC transporter, conserved site DOE58_RS01425 IPR005286 Cell division protein FtsE, ATP-binding DOE58_RS01425 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01425 IPR003593 AAA+ ATPase domain DOE58_RS01425 IPR003439 ABC transporter-like DOE58_RS01430 IPR004513 Cell division protein FtsX DOE58_RS01430 IPR040690 FtsX, extracellular domain DOE58_RS01430 IPR003838 ABC transporter permease protein domain DOE58_RS01435 IPR013325 RNA polymerase sigma factor, region 2 DOE58_RS01435 IPR014284 RNA polymerase sigma-70 like domain DOE58_RS01435 IPR000943 RNA polymerase sigma-70 DOE58_RS01435 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria DOE58_RS01435 IPR007627 RNA polymerase sigma-70 region 2 DOE58_RS01435 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE58_RS01435 IPR007630 RNA polymerase sigma-70 region 4 DOE58_RS01440 IPR028082 Periplasmic binding protein-like I DOE58_RS01440 IPR000709 Leu/Ile/Val-binding protein DOE58_RS01440 IPR028081 Leucine-binding protein domain DOE58_RS01450 IPR032900 PanD regulatory factor PanZ DOE58_RS01450 IPR040448 PanZ, acetyltransferase (GNAT) domain DOE58_RS01450 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS01450 IPR000182 GNAT domain DOE58_RS01455 IPR028082 Periplasmic binding protein-like I DOE58_RS01455 IPR000709 Leu/Ile/Val-binding protein DOE58_RS01455 IPR028081 Leucine-binding protein domain DOE58_RS01460 IPR001851 ABC transporter, permease DOE58_RS01465 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal DOE58_RS01465 IPR001851 ABC transporter, permease DOE58_RS01470 IPR003593 AAA+ ATPase domain DOE58_RS01470 IPR003439 ABC transporter-like DOE58_RS01470 IPR017871 ABC transporter, conserved site DOE58_RS01470 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE58_RS01470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01475 IPR017871 ABC transporter, conserved site DOE58_RS01475 IPR003593 AAA+ ATPase domain DOE58_RS01475 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DOE58_RS01475 IPR003439 ABC transporter-like DOE58_RS01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01480 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DOE58_RS01480 IPR036165 YefM-like superfamily DOE58_RS01490 IPR006059 Bacterial extracellular solute-binding protein DOE58_RS01490 IPR006061 Solute-binding family 1, conserved site DOE58_RS01495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS01495 IPR035906 MetI-like superfamily DOE58_RS01500 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE DOE58_RS01500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS01500 IPR035906 MetI-like superfamily DOE58_RS01505 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC DOE58_RS01505 IPR003593 AAA+ ATPase domain DOE58_RS01505 IPR003439 ABC transporter-like DOE58_RS01505 IPR017871 ABC transporter, conserved site DOE58_RS01505 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS01505 IPR040582 MalK, OB fold domain DOE58_RS01505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01510 IPR030395 Glycerophosphodiester phosphodiesterase domain DOE58_RS01510 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DOE58_RS01515 IPR020158 Protein of unknown function DUF2756 DOE58_RS01520 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS01520 IPR000101 Gamma-glutamyltranspeptidase DOE58_RS01525 IPR001559 Phosphotriesterase DOE58_RS01525 IPR032466 Metal-dependent hydrolase DOE58_RS01525 IPR017947 Aryldialkylphosphatase, zinc-binding site DOE58_RS01555 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS01555 IPR011877 Ribokinase DOE58_RS01555 IPR029056 Ribokinase-like DOE58_RS01555 IPR002139 Ribokinase/fructokinase DOE58_RS01555 IPR011611 Carbohydrate kinase PfkB DOE58_RS01560 IPR000182 GNAT domain DOE58_RS01560 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS01565 IPR036291 NAD(P)-binding domain superfamily DOE58_RS01565 IPR004104 Oxidoreductase, C-terminal DOE58_RS01565 IPR000683 Oxidoreductase, N-terminal DOE58_RS01570 IPR014710 RmlC-like jelly roll fold DOE58_RS01570 IPR011051 RmlC-like cupin domain superfamily DOE58_RS01570 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DOE58_RS01570 IPR003829 Pirin, N-terminal domain DOE58_RS01570 IPR012093 Pirin DOE58_RS01575 IPR000843 LacI-type HTH domain DOE58_RS01575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS01575 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE58_RS01575 IPR028082 Periplasmic binding protein-like I DOE58_RS01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01580 IPR031322 Shikimate kinase/gluconokinase DOE58_RS01580 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DOE58_RS01585 IPR003474 Gluconate transporter DOE58_RS01595 IPR036291 NAD(P)-binding domain superfamily DOE58_RS01595 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site DOE58_RS01595 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type DOE58_RS01595 IPR012080 Aspartate-semialdehyde dehydrogenase DOE58_RS01595 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE58_RS01595 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE58_RS01600 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta DOE58_RS01600 IPR037439 1,4-alpha-glucan-branching enzyme DOE58_RS01600 IPR013783 Immunoglobulin-like fold DOE58_RS01600 IPR017853 Glycoside hydrolase superfamily DOE58_RS01600 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB DOE58_RS01600 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS01600 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE58_RS01600 IPR014756 Immunoglobulin E-set DOE58_RS01600 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS01605 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS01605 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE58_RS01605 IPR022844 Glycogen debranching enzyme, bacterial DOE58_RS01605 IPR011837 Glycogen debranching enzyme, GlgX type DOE58_RS01605 IPR014756 Immunoglobulin E-set DOE58_RS01605 IPR017853 Glycoside hydrolase superfamily DOE58_RS01605 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS01605 IPR040784 Glycogen debranching enzyme, C-terminal domain DOE58_RS01605 IPR013783 Immunoglobulin-like fold DOE58_RS01610 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial DOE58_RS01610 IPR005835 Nucleotidyl transferase domain DOE58_RS01610 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS01610 IPR011831 Glucose-1-phosphate adenylyltransferase DOE58_RS01610 IPR005836 ADP-glucose pyrophosphorylase, conserved site DOE58_RS01610 IPR011004 Trimeric LpxA-like superfamily DOE58_RS01615 IPR011835 Bacterial/plant glycogen synthase DOE58_RS01615 IPR013534 Starch synthase, catalytic domain DOE58_RS01615 IPR001296 Glycosyl transferase, family 1 DOE58_RS01620 IPR011833 Glycogen/starch/alpha-glucan phosphorylase DOE58_RS01620 IPR000811 Glycosyl transferase, family 35 DOE58_RS01620 IPR035090 Phosphorylase pyridoxal-phosphate attachment site DOE58_RS01625 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DOE58_RS01625 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS01625 IPR006076 FAD dependent oxidoreductase DOE58_RS01625 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily DOE58_RS01625 IPR031656 Alpha-glycerophosphate oxidase, C-terminal DOE58_RS01630 IPR001763 Rhodanese-like domain DOE58_RS01630 IPR036873 Rhodanese-like domain superfamily DOE58_RS01630 IPR023695 Thiosulfate sulfurtransferase, bacterial DOE58_RS01635 IPR022764 Peptidase S54, rhomboid domain DOE58_RS01635 IPR022732 Peptidase S54, GlpG peptidase, N-terminal DOE58_RS01635 IPR038236 GlpG peptidase, N-terminal domain superfamily DOE58_RS01635 IPR023662 Rhomboid protease GlpG DOE58_RS01635 IPR035952 Rhomboid-like superfamily DOE58_RS01640 IPR001034 DeoR-type HTH domain DOE58_RS01640 IPR037171 NagB/RpiA transferase-like DOE58_RS01640 IPR014036 DeoR C-terminal sensor domain DOE58_RS01640 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS01640 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01640 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01645 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS01645 IPR023768 Transcriptional regulator HTH-type, MalT DOE58_RS01645 IPR041617 MalT-like TPR region DOE58_RS01645 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS01645 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01645 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS01650 IPR011833 Glycogen/starch/alpha-glucan phosphorylase DOE58_RS01650 IPR000811 Glycosyl transferase, family 35 DOE58_RS01650 IPR035090 Phosphorylase pyridoxal-phosphate attachment site DOE58_RS01655 IPR003385 Glycoside hydrolase, family 77 DOE58_RS01655 IPR017853 Glycoside hydrolase superfamily DOE58_RS01660 IPR003474 Gluconate transporter DOE58_RS01665 IPR017726 Fe/S biogenesis protein NfuA DOE58_RS01665 IPR035903 HesB-like domain superfamily DOE58_RS01665 IPR034904 Fe-S cluster assembly domain superfamily DOE58_RS01665 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal DOE58_RS01665 IPR000361 FeS cluster biogenesis DOE58_RS01670 IPR029057 Phosphoribosyltransferase-like DOE58_RS01670 IPR005222 Competence protein ComF DOE58_RS01670 IPR000836 Phosphoribosyltransferase domain DOE58_RS01675 IPR029058 Alpha/Beta hydrolase fold DOE58_RS01675 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase DOE58_RS01675 IPR000073 Alpha/beta hydrolase fold-1 DOE58_RS01680 IPR010106 Recombination-promoting nuclease RpnA DOE58_RS01680 IPR006842 Transposase (putative), YhgA-like DOE58_RS01685 IPR023732 Probable [Fe-S]-dependent transcriptional repressor DOE58_RS01685 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01685 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01685 IPR015102 Transcriptional regulator HTH-type, FeoC DOE58_RS01690 IPR011640 Ferrous iron transport protein B, C-terminal DOE58_RS01690 IPR003373 Ferrous iron transport protein B DOE58_RS01690 IPR005225 Small GTP-binding protein domain DOE58_RS01690 IPR041069 FeoB, cytosolic helical domain DOE58_RS01690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01690 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DOE58_RS01690 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE58_RS01695 IPR038157 Ferrous iron transporter, core domain DOE58_RS01695 IPR008988 Transcriptional repressor, C-terminal DOE58_RS01695 IPR007167 Ferrous iron transporter FeoA domain DOE58_RS01705 IPR018974 Tex-like protein, N-terminal DOE58_RS01705 IPR041692 HHH domain 9 DOE58_RS01705 IPR032639 Tex protein, YqgF-like domain DOE58_RS01705 IPR006641 YqgF/RNase H-like domain DOE58_RS01705 IPR022967 RNA-binding domain, S1 DOE58_RS01705 IPR023323 Tex-like domain superfamily DOE58_RS01705 IPR003029 S1 domain DOE58_RS01705 IPR010994 RuvA domain 2-like DOE58_RS01705 IPR012337 Ribonuclease H-like superfamily DOE58_RS01705 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS01705 IPR037027 YqgF/RNase H-like domain superfamily DOE58_RS01705 IPR023319 Tex-like protein, HTH domain superfamily DOE58_RS01710 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOE58_RS01710 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE58_RS01710 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOE58_RS01710 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE58_RS01710 IPR006358 Transcription elongation factor GreB DOE58_RS01710 IPR028624 Transcription elongation factor GreA/GreB DOE58_RS01710 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOE58_RS01710 IPR023459 Transcription elongation factor GreA/GreB family DOE58_RS01715 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS01715 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS01715 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS01715 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01715 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS01715 IPR011006 CheY-like superfamily DOE58_RS01720 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS01720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS01720 IPR005467 Histidine kinase domain DOE58_RS01720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS01720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS01720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS01720 IPR003660 HAMP domain DOE58_RS01725 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal DOE58_RS01725 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising DOE58_RS01725 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site DOE58_RS01725 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal DOE58_RS01730 IPR025291 Protein of unknown function DUF4153 DOE58_RS01735 IPR000397 Heat shock protein Hsp33 DOE58_RS01735 IPR016154 Heat shock protein Hsp33, C-terminal DOE58_RS01735 IPR016153 Heat shock protein Hsp33, N-terminal DOE58_RS01735 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DOE58_RS01740 IPR036986 RNA-binding S4 domain superfamily DOE58_RS01740 IPR025708 Heat shock protein 15 DOE58_RS01740 IPR002942 RNA-binding S4 domain DOE58_RS01745 IPR023214 HAD superfamily DOE58_RS01745 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS01745 IPR006439 HAD hydrolase, subfamily IA DOE58_RS01745 IPR036412 HAD-like superfamily DOE58_RS01750 IPR010771 Intracellular growth attenuator IgaA DOE58_RS01755 IPR000086 NUDIX hydrolase domain DOE58_RS01755 IPR020084 NUDIX hydrolase, conserved site DOE58_RS01755 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS01760 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS01760 IPR031376 Penicillin-binding protein, OB-like domain DOE58_RS01760 IPR036950 Penicillin binding protein transglycosylase domain DOE58_RS01760 IPR001264 Glycosyl transferase, family 51 DOE58_RS01760 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS01760 IPR023346 Lysozyme-like domain superfamily DOE58_RS01770 IPR007813 Fimbrial assembly PilN DOE58_RS01780 IPR019684 HofP protein DOE58_RS01785 IPR004846 Type II/III secretion system DOE58_RS01785 IPR013355 Type IV pilus secretin PilQ DOE58_RS01785 IPR011662 Secretin/TonB, short N-terminal domain DOE58_RS01785 IPR005644 NolW-like DOE58_RS01785 IPR001775 GspD/PilQ family DOE58_RS01785 IPR004845 Type II secretion system GspD, conserved site DOE58_RS01785 IPR038591 NolW-like superfamily DOE58_RS01800 IPR023000 Shikimate kinase, conserved site DOE58_RS01800 IPR000623 Shikimate kinase/Threonine synthase-like 1 DOE58_RS01800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01800 IPR031322 Shikimate kinase/gluconokinase DOE58_RS01805 IPR016037 3-dehydroquinate synthase AroB DOE58_RS01805 IPR030960 3-dehydroquinate synthase domain DOE58_RS01805 IPR030963 3-dehydroquinate synthase family DOE58_RS01810 IPR032899 Cell division protein DamX DOE58_RS01810 IPR007730 Sporulation-like domain DOE58_RS01810 IPR036680 Sporulation-like domain superfamily DOE58_RS01815 IPR023095 Adenine-specific methyltransferase, domain 2 DOE58_RS01815 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS01815 IPR012263 Adenine modification methylase, M.EcoRV-type DOE58_RS01815 IPR012327 D12 class N6 adenine-specific DNA methyltransferase DOE58_RS01815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS01820 IPR011060 Ribulose-phosphate binding barrel DOE58_RS01820 IPR000056 Ribulose-phosphate 3-epimerase-like DOE58_RS01820 IPR013785 Aldolase-type TIM barrel DOE58_RS01820 IPR026019 Ribulose-phosphate 3-epimerase DOE58_RS01825 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS01825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS01825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DOE58_RS01825 IPR037512 Phosphoglycolate phosphatase, prokaryotic DOE58_RS01825 IPR006439 HAD hydrolase, subfamily IA DOE58_RS01825 IPR036412 HAD-like superfamily DOE58_RS01825 IPR023214 HAD superfamily DOE58_RS01830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS01830 IPR024109 Tryptophan-tRNA ligase, bacterial-type DOE58_RS01830 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE58_RS01830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS01830 IPR002306 Tryptophan-tRNA ligase DOE58_RS01835 IPR025318 Protein of unknown function DUF4223 DOE58_RS01840 IPR005546 Autotransporter beta-domain DOE58_RS01840 IPR036709 Autotransporter beta-domain superfamily DOE58_RS01845 IPR037115 Sirohaem synthase, dimerisation domain superfamily DOE58_RS01845 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS01845 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE58_RS01845 IPR012409 Sirohaem synthase DOE58_RS01845 IPR036291 NAD(P)-binding domain superfamily DOE58_RS01845 IPR006366 Uroporphyrin-III C-methyltransferase DOE58_RS01845 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE58_RS01845 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS01845 IPR000878 Tetrapyrrole methylase DOE58_RS01845 IPR019478 Sirohaem synthase, dimerisation domain DOE58_RS01845 IPR028281 Siroheme synthase, central domain DOE58_RS01845 IPR006367 Sirohaem synthase, N-terminal DOE58_RS01850 IPR023271 Aquaporin-like DOE58_RS01850 IPR000292 Formate/nitrite transporter DOE58_RS01850 IPR024002 Formate/nitrite transporter, conserved site DOE58_RS01860 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type DOE58_RS01860 IPR017881 Nitrite reductase (NADH) small subunit DOE58_RS01860 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DOE58_RS01865 IPR023753 FAD/NAD(P)-binding domain DOE58_RS01865 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal DOE58_RS01865 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE58_RS01865 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS01865 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE58_RS01865 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE58_RS01865 IPR017121 Nitrite reductase [NAD(P)H], large subunit DOE58_RS01865 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB DOE58_RS01865 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE58_RS01865 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE58_RS01865 IPR007419 BFD-like [2Fe-2S]-binding domain DOE58_RS01870 IPR023528 Major facilitator superfamily transporter, TsgA DOE58_RS01870 IPR011701 Major facilitator superfamily DOE58_RS01870 IPR020846 Major facilitator superfamily domain DOE58_RS01870 IPR036259 MFS transporter superfamily DOE58_RS01875 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOE58_RS01875 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS01875 IPR029000 Cyclophilin-like domain superfamily DOE58_RS01880 IPR022541 Protein of unknown function DUF2559 DOE58_RS01885 IPR036597 Fido-like domain superfamily DOE58_RS01885 IPR003812 Fido domain DOE58_RS01890 IPR029062 Class I glutamine amidotransferase-like DOE58_RS01890 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DOE58_RS01890 IPR017926 Glutamine amidotransferase DOE58_RS01895 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DOE58_RS01895 IPR004636 Acetylornithine/Succinylornithine transaminase family DOE58_RS01895 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS01895 IPR005814 Aminotransferase class-III DOE58_RS01895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS01895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS01900 IPR010020 Integral membrane protein, YccS/YhfK DOE58_RS01900 IPR032692 Integral membrane protein YccS, N-terminal DOE58_RS01905 IPR000595 Cyclic nucleotide-binding domain DOE58_RS01905 IPR018488 Cyclic nucleotide-binding, conserved site DOE58_RS01905 IPR018490 Cyclic nucleotide-binding-like DOE58_RS01905 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01905 IPR014710 RmlC-like jelly roll fold DOE58_RS01905 IPR012318 Crp-type HTH domain DOE58_RS01905 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOE58_RS01905 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01910 IPR003718 OsmC/Ohr family DOE58_RS01910 IPR036102 OsmC/Ohr superfamily DOE58_RS01910 IPR015946 K homology domain-like, alpha/beta DOE58_RS01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01915 IPR006082 Phosphoribulokinase DOE58_RS01915 IPR006083 Phosphoribulokinase/uridine kinase DOE58_RS01920 IPR010648 Uncharacterised protein family UPF0270 DOE58_RS01920 IPR036685 YehU-like superfamily DOE58_RS01925 IPR000073 Alpha/beta hydrolase fold-1 DOE58_RS01925 IPR029058 Alpha/Beta hydrolase fold DOE58_RS01925 IPR000952 AB hydrolase 4, conserved site DOE58_RS01925 IPR012020 AB hydrolase 4 family DOE58_RS01930 IPR011008 Dimeric alpha-beta barrel DOE58_RS01930 IPR014910 Putative monooxygenase YdhR DOE58_RS01935 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS01935 IPR000847 Transcription regulator HTH, LysR DOE58_RS01935 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS01935 IPR005119 LysR, substrate-binding DOE58_RS01935 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain DOE58_RS01940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS01940 IPR003439 ABC transporter-like DOE58_RS01940 IPR003593 AAA+ ATPase domain DOE58_RS01940 IPR017871 ABC transporter, conserved site DOE58_RS01940 IPR032781 ABC-transporter extension domain DOE58_RS01945 IPR003680 Flavodoxin-like fold DOE58_RS01945 IPR029039 Flavoprotein-like superfamily DOE58_RS01945 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG DOE58_RS01950 IPR006153 Cation/H+ exchanger DOE58_RS01950 IPR004771 K+/H+ exchanger DOE58_RS01950 IPR020884 Glutathione-regulated potassium-efflux system protein KefB DOE58_RS01950 IPR006036 Potassium uptake protein TrkA DOE58_RS01950 IPR038770 Sodium/solute symporter superfamily DOE58_RS01950 IPR036291 NAD(P)-binding domain superfamily DOE58_RS01950 IPR003148 Regulator of K+ conductance, N-terminal DOE58_RS01955 IPR012658 Conserved hypothetical protein CHP02443 DOE58_RS01960 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS01970 IPR007236 SlyX DOE58_RS01975 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS01975 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOE58_RS01975 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOE58_RS01985 IPR036515 Transposase IS200-like superfamily DOE58_RS01985 IPR002686 Transposase IS200-like DOE58_RS01995 IPR039445 Transcriptional regulator DauR-like, HTH domain DOE58_RS01995 IPR039446 Transcriptional regulator DauR-like DOE58_RS01995 IPR013559 YheO-like DOE58_RS02000 IPR003787 Sulphur relay, DsrE/F-like protein DOE58_RS02000 IPR027396 DsrEFH-like DOE58_RS02000 IPR017463 Sulphur relay, TusD/DsrE DOE58_RS02005 IPR017462 Sulphur relay, TusC/DsrF DOE58_RS02005 IPR037450 Sulphur relay, TusC DOE58_RS02005 IPR003787 Sulphur relay, DsrE/F-like protein DOE58_RS02005 IPR027396 DsrEFH-like DOE58_RS02010 IPR023526 Sulphur relay, TusB DOE58_RS02010 IPR007215 Sulphur relay, TusB/DsrH DOE58_RS02010 IPR027396 DsrEFH-like DOE58_RS02015 IPR006032 Ribosomal protein S12/S23 DOE58_RS02015 IPR005679 Ribosomal protein S12, bacterial-type DOE58_RS02015 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02020 IPR023798 Ribosomal protein S7 domain DOE58_RS02020 IPR000235 Ribosomal protein S5/S7 DOE58_RS02020 IPR005717 Ribosomal protein S7, bacterial/organellar-type DOE58_RS02020 IPR036823 Ribosomal protein S7 domain superfamily DOE58_RS02020 IPR020606 Ribosomal protein S7, conserved site DOE58_RS02025 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS02025 IPR035649 EFG, domain V DOE58_RS02025 IPR035647 EF-G domain III/V-like DOE58_RS02025 IPR009022 Elongation factor G, domain III DOE58_RS02025 IPR041095 Elongation Factor G, domain II DOE58_RS02025 IPR000640 Elongation factor EFG, domain V-like DOE58_RS02025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02025 IPR005517 Translation elongation factor EFG/EF2, domain IV DOE58_RS02025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS02025 IPR004540 Translation elongation factor EFG/EF2 DOE58_RS02025 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS02025 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS02025 IPR005225 Small GTP-binding protein domain DOE58_RS02025 IPR000795 Transcription factor, GTP-binding domain DOE58_RS02025 IPR031157 Tr-type G domain, conserved site DOE58_RS02030 IPR000795 Transcription factor, GTP-binding domain DOE58_RS02030 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS02030 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE58_RS02030 IPR005225 Small GTP-binding protein domain DOE58_RS02030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02030 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DOE58_RS02030 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOE58_RS02030 IPR033720 Elongation factor Tu, domain 2 DOE58_RS02030 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS02030 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DOE58_RS02030 IPR031157 Tr-type G domain, conserved site DOE58_RS02045 IPR007419 BFD-like [2Fe-2S]-binding domain DOE58_RS02045 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE58_RS02050 IPR009040 Ferritin-like diiron domain DOE58_RS02050 IPR012347 Ferritin-like DOE58_RS02050 IPR008331 Ferritin/DPS protein domain DOE58_RS02050 IPR002024 Bacterioferritin DOE58_RS02050 IPR009078 Ferritin-like superfamily DOE58_RS02055 IPR000045 Prepilin type IV endopeptidase, peptidase domain DOE58_RS02055 IPR014032 Peptidase A24A, prepilin type IV, bacterial DOE58_RS02065 IPR036838 Ribosomal protein S10 domain superfamily DOE58_RS02065 IPR027486 Ribosomal protein S10 domain DOE58_RS02065 IPR018268 Ribosomal protein S10, conserved site DOE58_RS02065 IPR001848 Ribosomal protein S10 DOE58_RS02070 IPR019926 Ribosomal protein L3, conserved site DOE58_RS02070 IPR000597 Ribosomal protein L3 DOE58_RS02070 IPR019927 Ribosomal protein L3, bacterial/organelle-type DOE58_RS02070 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS02075 IPR013005 50S ribosomal protein uL4 DOE58_RS02075 IPR002136 Ribosomal protein L4/L1e DOE58_RS02075 IPR023574 Ribosomal protein L4 domain superfamily DOE58_RS02080 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE58_RS02080 IPR013025 Ribosomal protein L25/L23 DOE58_RS02080 IPR001014 Ribosomal protein L23/L25, conserved site DOE58_RS02080 IPR012678 Ribosomal protein L23/L15e core domain superfamily DOE58_RS02085 IPR014722 Ribosomal protein L2, domain 2 DOE58_RS02085 IPR002171 Ribosomal protein L2 DOE58_RS02085 IPR022671 Ribosomal protein L2, conserved site DOE58_RS02085 IPR022666 Ribosomal Proteins L2, RNA binding domain DOE58_RS02085 IPR005880 Ribosomal protein L2, bacterial/organellar-type DOE58_RS02085 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02085 IPR014726 Ribosomal protein L2, domain 3 DOE58_RS02085 IPR022669 Ribosomal protein L2, C-terminal DOE58_RS02085 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS02090 IPR002222 Ribosomal protein S19/S15 DOE58_RS02090 IPR005732 Ribosomal protein S19, bacterial-type DOE58_RS02090 IPR020934 Ribosomal protein S19 conserved site DOE58_RS02090 IPR023575 Ribosomal protein S19, superfamily DOE58_RS02095 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DOE58_RS02095 IPR036394 Ribosomal protein L22/L17 superfamily DOE58_RS02095 IPR018260 Ribosomal protein L22/L17, conserved site DOE58_RS02095 IPR001063 Ribosomal protein L22/L17 DOE58_RS02100 IPR004044 K Homology domain, type 2 DOE58_RS02100 IPR009019 K homology domain superfamily, prokaryotic type DOE58_RS02100 IPR015946 K homology domain-like, alpha/beta DOE58_RS02100 IPR005704 Ribosomal protein S3, bacterial-type DOE58_RS02100 IPR001351 Ribosomal protein S3, C-terminal DOE58_RS02100 IPR018280 Ribosomal protein S3, conserved site DOE58_RS02100 IPR004087 K Homology domain DOE58_RS02100 IPR036419 Ribosomal protein S3, C-terminal domain superfamily DOE58_RS02105 IPR016180 Ribosomal protein L10e/L16 DOE58_RS02105 IPR036920 Ribosomal protein L10e/L16 superfamily DOE58_RS02105 IPR000114 Ribosomal protein L16 DOE58_RS02105 IPR020798 Ribosomal protein L16, conserved site DOE58_RS02110 IPR001854 Ribosomal protein L29/L35 DOE58_RS02110 IPR036049 Ribosomal protein L29/L35 superfamily DOE58_RS02110 IPR018254 Ribosomal protein L29, conserved site DOE58_RS02115 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02115 IPR019979 Ribosomal protein S17, conserved site DOE58_RS02115 IPR000266 Ribosomal protein S17/S11 DOE58_RS02115 IPR019984 30S ribosomal protein S17 DOE58_RS02120 IPR036853 Ribosomal protein L14 superfamily DOE58_RS02120 IPR000218 Ribosomal protein L14P DOE58_RS02120 IPR005745 Ribosomal protein L14P, bacterial-type DOE58_RS02120 IPR019972 Ribosomal protein L14P, conserved site DOE58_RS02125 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS02125 IPR003256 Ribosomal protein L24 DOE58_RS02125 IPR041988 Ribosomal Protein L26/L24, KOW domain DOE58_RS02125 IPR005825 Ribosomal protein L24/L26, conserved site DOE58_RS02125 IPR005824 KOW DOE58_RS02125 IPR014722 Ribosomal protein L2, domain 2 DOE58_RS02130 IPR031310 Ribosomal protein L5, N-terminal DOE58_RS02130 IPR020929 Ribosomal protein L5, conserved site DOE58_RS02130 IPR031309 Ribosomal protein L5, C-terminal DOE58_RS02130 IPR002132 Ribosomal protein L5 DOE58_RS02130 IPR022803 Ribosomal protein L5 domain superfamily DOE58_RS02130 IPR020930 Ribosomal protein L5, bacterial-type DOE58_RS02135 IPR018271 Ribosomal protein S14, conserved site DOE58_RS02135 IPR023036 Ribosomal protein S14, bacterial/plastid DOE58_RS02135 IPR001209 Ribosomal protein S14 DOE58_RS02140 IPR035987 Ribosomal protein S8 superfamily DOE58_RS02140 IPR000630 Ribosomal protein S8 DOE58_RS02145 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DOE58_RS02145 IPR000702 Ribosomal protein L6 DOE58_RS02145 IPR019906 Ribosomal protein L6, bacterial-type DOE58_RS02145 IPR002358 Ribosomal protein L6, conserved site DOE58_RS02145 IPR020040 Ribosomal protein L6, alpha-beta domain DOE58_RS02150 IPR004389 Ribosomal protein L18, bacterial-type DOE58_RS02150 IPR005484 Ribosomal protein L18 DOE58_RS02155 IPR018192 Ribosomal protein S5, N-terminal, conserved site DOE58_RS02155 IPR000851 Ribosomal protein S5 DOE58_RS02155 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS02155 IPR005324 Ribosomal protein S5, C-terminal DOE58_RS02155 IPR013810 Ribosomal protein S5, N-terminal DOE58_RS02155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS02155 IPR005712 Ribosomal protein S5, bacterial-type DOE58_RS02160 IPR005996 Ribosomal protein L30, bacterial-type DOE58_RS02160 IPR018038 Ribosomal protein L30, conserved site DOE58_RS02160 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DOE58_RS02160 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DOE58_RS02165 IPR001196 Ribosomal protein L15, conserved site DOE58_RS02165 IPR021131 Ribosomal protein L18e/L15P DOE58_RS02165 IPR030878 Ribosomal protein L15 DOE58_RS02165 IPR005749 Ribosomal protein L15, bacterial-type DOE58_RS02165 IPR036227 Ribosomal L18e/L15P superfamily DOE58_RS02170 IPR023201 SecY domain superfamily DOE58_RS02170 IPR030659 SecY conserved site DOE58_RS02170 IPR002208 SecY/SEC61-alpha family DOE58_RS02170 IPR026593 Protein translocase subunit SecY DOE58_RS02175 IPR035977 Ribosomal protein L36 superfamily DOE58_RS02175 IPR000473 Ribosomal protein L36 DOE58_RS02180 IPR018269 Ribosomal protein S13, conserved site DOE58_RS02180 IPR010979 Ribosomal protein S13-like, H2TH DOE58_RS02180 IPR027437 30s ribosomal protein S13, C-terminal DOE58_RS02180 IPR001892 Ribosomal protein S13 DOE58_RS02180 IPR019980 Ribosomal protein S13, bacterial-type DOE58_RS02185 IPR036967 Ribosomal protein S11 superfamily DOE58_RS02185 IPR018102 Ribosomal S11, conserved site DOE58_RS02185 IPR019981 Ribosomal protein S11, bacterial-type DOE58_RS02185 IPR001971 Ribosomal protein S11 DOE58_RS02190 IPR001912 Ribosomal protein S4/S9, N-terminal DOE58_RS02190 IPR036986 RNA-binding S4 domain superfamily DOE58_RS02190 IPR018079 Ribosomal protein S4, conserved site DOE58_RS02190 IPR005709 Ribosomal protein S4, bacterial-type DOE58_RS02190 IPR022801 Ribosomal protein S4/S9 DOE58_RS02190 IPR002942 RNA-binding S4 domain DOE58_RS02195 IPR036603 RNA polymerase, RBP11-like subunit DOE58_RS02195 IPR011262 DNA-directed RNA polymerase, insert domain DOE58_RS02195 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DOE58_RS02195 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DOE58_RS02195 IPR011260 RNA polymerase, alpha subunit, C-terminal DOE58_RS02195 IPR011773 DNA-directed RNA polymerase, alpha subunit DOE58_RS02200 IPR000456 Ribosomal protein L17 DOE58_RS02200 IPR036373 Ribosomal protein L17 superfamily DOE58_RS02205 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DOE58_RS02210 IPR011788 Zn(II)-responsive transcriptional regulator DOE58_RS02210 IPR009061 Putative DNA-binding domain superfamily DOE58_RS02210 IPR000551 MerR-type HTH domain DOE58_RS02215 IPR005589 Alternative ribosome-rescue factor A DOE58_RS02220 IPR036019 Gated mechanosensitive channel DOE58_RS02220 IPR001185 Large-conductance mechanosensitive channel DOE58_RS02220 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DOE58_RS02220 IPR019823 Large-conductance mechanosensitive channel, conserved site DOE58_RS02225 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02225 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE58_RS02225 IPR003148 Regulator of K+ conductance, N-terminal DOE58_RS02225 IPR006037 Regulator of K+ conductance, C-terminal DOE58_RS02225 IPR006036 Potassium uptake protein TrkA DOE58_RS02230 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DOE58_RS02230 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DOE58_RS02230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS02230 IPR006027 NusB/RsmB/TIM44 DOE58_RS02230 IPR023267 RNA (C5-cytosine) methyltransferase DOE58_RS02230 IPR004573 rRNA small subunit methyltransferase B DOE58_RS02230 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae DOE58_RS02230 IPR035926 NusB-like superfamily DOE58_RS02235 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOE58_RS02235 IPR037022 Formyl transferase, C-terminal domain superfamily DOE58_RS02235 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOE58_RS02235 IPR005793 Formyl transferase, C-terminal DOE58_RS02235 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DOE58_RS02235 IPR005794 Methionyl-tRNA formyltransferase DOE58_RS02235 IPR002376 Formyl transferase, N-terminal DOE58_RS02235 IPR036477 Formyl transferase, N-terminal domain superfamily DOE58_RS02240 IPR036821 Peptide deformylase superfamily DOE58_RS02240 IPR023635 Peptide deformylase DOE58_RS02245 IPR003488 DNA recombination-mediator protein A DOE58_RS02245 IPR041614 DprA, winged helix domain DOE58_RS02245 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02250 IPR007456 Smg DOE58_RS02255 IPR013498 DNA topoisomerase, type IA, zn finger DOE58_RS02255 IPR000380 DNA topoisomerase, type IA DOE58_RS02260 IPR006070 YrdC-like domain DOE58_RS02260 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE58_RS02260 IPR023535 Threonylcarbamoyl-AMP synthase DOE58_RS02265 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02265 IPR041121 SDH, C-terminal DOE58_RS02265 IPR022893 Shikimate dehydrogenase family DOE58_RS02265 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE58_RS02265 IPR011342 Shikimate dehydrogenase DOE58_RS02265 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DOE58_RS02270 IPR009962 Protein of unknown function DUF1488 DOE58_RS02270 IPR036692 Shew3726-like superfamily DOE58_RS02275 IPR011004 Trimeric LpxA-like superfamily DOE58_RS02275 IPR001451 Hexapeptide repeat DOE58_RS02315 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE58_RS02315 IPR001036 Acriflavin resistance protein DOE58_RS02315 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS02320 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS02320 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS02325 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS02325 IPR009057 Homeobox-like domain superfamily DOE58_RS02325 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS02325 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS02325 IPR013572 Transcription regulator MAATS, C-terminal DOE58_RS02330 IPR001633 EAL domain DOE58_RS02330 IPR029787 Nucleotide cyclase DOE58_RS02330 IPR005330 MHYT domain DOE58_RS02330 IPR000160 GGDEF domain DOE58_RS02330 IPR035919 EAL domain superfamily DOE58_RS02335 IPR022540 Protein of unknown function DUF2556 DOE58_RS02340 IPR002941 DNA methylase N-4/N-6 DOE58_RS02340 IPR001091 Restriction/modification DNA-methylase DOE58_RS02340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS02340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS02345 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS02345 IPR009057 Homeobox-like domain superfamily DOE58_RS02345 IPR005412 DNA-binding protein Fis DOE58_RS02350 IPR001269 tRNA-dihydrouridine synthase DOE58_RS02350 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DOE58_RS02350 IPR032887 tRNA-dihydrouridine synthase B DOE58_RS02350 IPR013785 Aldolase-type TIM barrel DOE58_RS02350 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DOE58_RS02350 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE58_RS02350 IPR035587 DUS-like, FMN-binding domain DOE58_RS02355 IPR004498 Ribosomal protein L11 methyltransferase DOE58_RS02355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS02360 IPR011849 Sodium/pantothenate symporter DOE58_RS02360 IPR038377 Sodium/glucose symporter superfamily DOE58_RS02360 IPR018212 Sodium/solute symporter, conserved site DOE58_RS02360 IPR001734 Sodium/solute symporter DOE58_RS02365 IPR010398 Protein of unknown function DUF997 DOE58_RS02370 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS02370 IPR011761 ATP-grasp fold DOE58_RS02370 IPR011764 Biotin carboxylation domain DOE58_RS02370 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DOE58_RS02370 IPR005481 Biotin carboxylase-like, N-terminal domain DOE58_RS02370 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS02370 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOE58_RS02370 IPR005482 Biotin carboxylase, C-terminal DOE58_RS02370 IPR011054 Rudiment single hybrid motif DOE58_RS02375 IPR000089 Biotin/lipoyl attachment DOE58_RS02375 IPR011053 Single hybrid motif DOE58_RS02375 IPR001249 Acetyl-CoA biotin carboxyl carrier DOE58_RS02375 IPR001882 Biotin-binding site DOE58_RS02380 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ DOE58_RS02380 IPR013130 Ferric reductase transmembrane component-like domain DOE58_RS02385 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily DOE58_RS02385 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS02385 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP DOE58_RS02385 IPR000572 Oxidoreductase, molybdopterin-binding domain DOE58_RS02390 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS02390 IPR014188 Acrylyl-CoA reductase AcuI DOE58_RS02390 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS02390 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS02390 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02390 IPR011032 GroES-like superfamily DOE58_RS02395 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 DOE58_RS02395 IPR035919 EAL domain superfamily DOE58_RS02395 IPR001633 EAL domain DOE58_RS02395 IPR029787 Nucleotide cyclase DOE58_RS02395 IPR000160 GGDEF domain DOE58_RS02410 IPR004753 Cell shape determining protein MreB DOE58_RS02415 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 DOE58_RS02415 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 DOE58_RS02415 IPR007221 Rod shape-determining protein MreC DOE58_RS02420 IPR026034 Cell shape-determining protein MreD, proteobacterial type DOE58_RS02420 IPR007227 Cell shape-determining protein MreD DOE58_RS02425 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOE58_RS02425 IPR029001 Inosine triphosphate pyrophosphatase-like DOE58_RS02430 IPR003029 S1 domain DOE58_RS02430 IPR022967 RNA-binding domain, S1 DOE58_RS02430 IPR004659 Ribonuclease E/G DOE58_RS02430 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOE58_RS02430 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02435 IPR025263 Domain of unknown function DUF3971 DOE58_RS02435 IPR032712 AsmA-like, C-terminal DOE58_RS02435 IPR011836 Conserved hypothetical protein CHP02099 DOE58_RS02440 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOE58_RS02440 IPR036059 Metalloprotease TldD/PmbA superfamily DOE58_RS02440 IPR002510 Metalloprotease TldD/PmbA DOE58_RS02440 IPR025502 TldD DOE58_RS02445 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS02445 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02445 IPR000847 Transcription regulator HTH, LysR DOE58_RS02445 IPR005119 LysR, substrate-binding DOE58_RS02450 IPR012451 Protein of unknown function DUF1656 DOE58_RS02455 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS02455 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA DOE58_RS02455 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE58_RS02460 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB DOE58_RS02460 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE58_RS02465 IPR035905 Barstar-like superfamily DOE58_RS02465 IPR000468 Barstar (barnase inhibitor) DOE58_RS02470 IPR025543 Dodecin-like DOE58_RS02470 IPR010854 Domain of unknown function DUF1471 DOE58_RS02470 IPR036275 YdgH-like superfamily DOE58_RS02475 IPR025543 Dodecin-like DOE58_RS02475 IPR010854 Domain of unknown function DUF1471 DOE58_RS02475 IPR036275 YdgH-like superfamily DOE58_RS02480 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS02480 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02480 IPR020900 Arginine repressor, DNA-binding domain DOE58_RS02480 IPR036251 Arginine repressor, C-terminal domain superfamily DOE58_RS02480 IPR001669 Arginine repressor DOE58_RS02480 IPR020899 Arginine repressor, C-terminal DOE58_RS02485 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE58_RS02485 IPR001236 Lactate/malate dehydrogenase, N-terminal DOE58_RS02485 IPR022383 Lactate/malate dehydrogenase, C-terminal DOE58_RS02485 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02485 IPR001252 Malate dehydrogenase, active site DOE58_RS02485 IPR023958 Malate dehydrogenase, type 1, bacterial DOE58_RS02485 IPR001557 L-lactate/malate dehydrogenase DOE58_RS02485 IPR010097 Malate dehydrogenase, type 1 DOE58_RS02490 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS02490 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS02490 IPR000524 Transcription regulator HTH, GntR DOE58_RS02490 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02490 IPR011663 UbiC transcription regulator-associated DOE58_RS02500 IPR001898 Solute carrier family 13 DOE58_RS02500 IPR031312 Sodium/sulphate symporter, conserved site DOE58_RS02505 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE58_RS02510 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE58_RS02510 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE58_RS02515 IPR023424 Oxaloacetate decarboxylase gamma chain, probable DOE58_RS02515 IPR005899 Sodium ion-translocating decarboxylase DOE58_RS02520 IPR000089 Biotin/lipoyl attachment DOE58_RS02520 IPR003379 Carboxylase, conserved domain DOE58_RS02520 IPR001882 Biotin-binding site DOE58_RS02520 IPR013785 Aldolase-type TIM barrel DOE58_RS02520 IPR005776 Oxaloacetate decarboxylase, alpha subunit DOE58_RS02520 IPR000891 Pyruvate carboxyltransferase DOE58_RS02520 IPR011053 Single hybrid motif DOE58_RS02525 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit DOE58_RS02530 IPR002736 Triphosphoribosyl-dephospho-CoA protein DOE58_RS02530 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG DOE58_RS02535 IPR011783 Peptidase S1C, DegS DOE58_RS02535 IPR009003 Peptidase S1, PA clan DOE58_RS02535 IPR001940 Peptidase S1C DOE58_RS02535 IPR001478 PDZ domain DOE58_RS02535 IPR036034 PDZ superfamily DOE58_RS02540 IPR036034 PDZ superfamily DOE58_RS02540 IPR009003 Peptidase S1, PA clan DOE58_RS02540 IPR001478 PDZ domain DOE58_RS02540 IPR001940 Peptidase S1C DOE58_RS02540 IPR011782 Peptidase S1C, Do DOE58_RS02545 IPR009386 Protein of unknown function DUF1043 DOE58_RS02550 IPR030870 Cell division protein ZapE DOE58_RS02550 IPR005654 ATPase, AFG1-like DOE58_RS02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02555 IPR005823 Ribosomal protein L13, bacterial-type DOE58_RS02555 IPR005822 Ribosomal protein L13 DOE58_RS02555 IPR023563 Ribosomal protein L13, conserved site DOE58_RS02555 IPR036899 Ribosomal protein L13 superfamily DOE58_RS02560 IPR020574 Ribosomal protein S9, conserved site DOE58_RS02560 IPR023035 Ribosomal protein S9, bacterial/plastid DOE58_RS02560 IPR000754 Ribosomal protein S9 DOE58_RS02560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS02560 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS02565 IPR034341 Stringent starvation protein A, N-terminal DOE58_RS02565 IPR040079 Glutathione Transferase family DOE58_RS02565 IPR036249 Thioredoxin-like superfamily DOE58_RS02565 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS02565 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS02565 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS02565 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS02570 IPR007481 Stringent starvation protein B DOE58_RS02570 IPR036760 SspB-like superfamily DOE58_RS02575 IPR023730 HTH-type transcriptional repressor NanR DOE58_RS02575 IPR000524 Transcription regulator HTH, GntR DOE58_RS02575 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS02575 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS02575 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02575 IPR011711 GntR, C-terminal DOE58_RS02580 IPR020624 Schiff base-forming aldolase, conserved site DOE58_RS02580 IPR005264 N-acetylneuraminate lyase DOE58_RS02580 IPR002220 DapA-like DOE58_RS02580 IPR013785 Aldolase-type TIM barrel DOE58_RS02580 IPR020625 Schiff base-forming aldolase, active site DOE58_RS02585 IPR036259 MFS transporter superfamily DOE58_RS02585 IPR020846 Major facilitator superfamily domain DOE58_RS02585 IPR011701 Major facilitator superfamily DOE58_RS02585 IPR004742 Sialic acid transporter DOE58_RS02590 IPR011060 Ribulose-phosphate binding barrel DOE58_RS02590 IPR013785 Aldolase-type TIM barrel DOE58_RS02590 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase DOE58_RS02595 IPR023945 N-acetylmannosamine kinase, bacterial DOE58_RS02595 IPR000600 ROK family DOE58_RS02600 IPR004375 YhcH/YjgK/YiaL family DOE58_RS02600 IPR037012 YhcH/YjgK/YiaL superfamily DOE58_RS02605 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS02605 IPR013108 Amidohydrolase 3 DOE58_RS02605 IPR032466 Metal-dependent hydrolase DOE58_RS02610 IPR001248 Purine-cytosine permease DOE58_RS02610 IPR038271 Purine-cytosine permease superfamily DOE58_RS02610 IPR030191 Cytosine permease DOE58_RS02615 IPR009362 YhcG PDDEXK nuclease domain DOE58_RS02615 IPR041527 YhcG, N-terminal DOE58_RS02620 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS02620 IPR028261 Dihydroprymidine dehydrogenase domain II DOE58_RS02620 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS02620 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DOE58_RS02620 IPR009051 Alpha-helical ferredoxin DOE58_RS02620 IPR023753 FAD/NAD(P)-binding domain DOE58_RS02625 IPR002489 Glutamate synthase, alpha subunit, C-terminal DOE58_RS02625 IPR002932 Glutamate synthase domain DOE58_RS02625 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS02625 IPR006982 Glutamate synthase, central-N DOE58_RS02625 IPR017932 Glutamine amidotransferase type 2 domain DOE58_RS02625 IPR013785 Aldolase-type TIM barrel DOE58_RS02625 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily DOE58_RS02635 IPR005911 Protein YhcC-like DOE58_RS02635 IPR006638 Elp3/MiaB/NifB DOE58_RS02635 IPR023404 Radical SAM, alpha/beta horseshoe DOE58_RS02635 IPR007197 Radical SAM DOE58_RS02635 IPR032432 Radical SAM, C-terminal extension DOE58_RS02635 IPR039661 ELP3/YhcC DOE58_RS02640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS02640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS02640 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB DOE58_RS02640 IPR036641 HPT domain superfamily DOE58_RS02640 IPR000014 PAS domain DOE58_RS02640 IPR000700 PAS-associated, C-terminal DOE58_RS02640 IPR040642 Histidine kinase receptor ArcB, transmembrane domain DOE58_RS02640 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily DOE58_RS02640 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS02640 IPR013767 PAS fold DOE58_RS02640 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS02640 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS02640 IPR011006 CheY-like superfamily DOE58_RS02640 IPR005467 Histidine kinase domain DOE58_RS02640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS02640 IPR035965 PAS domain superfamily DOE58_RS02640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS02645 IPR029062 Class I glutamine amidotransferase-like DOE58_RS02645 IPR026041 Glyoxalase ElbB DOE58_RS02650 IPR036950 Penicillin binding protein transglycosylase domain DOE58_RS02650 IPR023346 Lysozyme-like domain superfamily DOE58_RS02650 IPR001264 Glycosyl transferase, family 51 DOE58_RS02650 IPR011812 Biosynthetic peptidoglycan transglycosylase DOE58_RS02655 IPR011009 Protein kinase-like domain superfamily DOE58_RS02655 IPR019647 PhoP regulatory network protein YrbL DOE58_RS02665 IPR000032 Phosphocarrier protein HPr-like DOE58_RS02665 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE58_RS02665 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE58_RS02665 IPR035895 HPr-like superfamily DOE58_RS02670 IPR005337 RapZ-like family DOE58_RS02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02675 IPR002178 PTS EIIA type-2 domain DOE58_RS02675 IPR016152 Phosphotransferase/anion transporter DOE58_RS02675 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DOE58_RS02680 IPR036567 Ribosome hibernation promotion factor-like DOE58_RS02680 IPR003489 Ribosome hibernation promoting factor/RaiA DOE58_RS02685 IPR000394 RNA polymerase sigma factor 54 DOE58_RS02685 IPR007634 RNA polymerase sigma factor 54, DNA-binding DOE58_RS02685 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DOE58_RS02685 IPR007046 RNA polymerase sigma factor 54, core-binding domain DOE58_RS02690 IPR017871 ABC transporter, conserved site DOE58_RS02690 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE58_RS02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02690 IPR003593 AAA+ ATPase domain DOE58_RS02690 IPR003439 ABC transporter-like DOE58_RS02690 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DOE58_RS02695 IPR014340 Lipopolysaccharide export system protein LptA DOE58_RS02695 IPR005653 Organic solvent tolerance-like, N-terminal DOE58_RS02700 IPR010664 Lipopolysaccharide assembly, LptC-related DOE58_RS02700 IPR026265 Lipopolysaccharide export system protein LptC DOE58_RS02705 IPR036412 HAD-like superfamily DOE58_RS02705 IPR023214 HAD superfamily DOE58_RS02705 IPR010023 KdsC family DOE58_RS02710 IPR001347 Sugar isomerase (SIS) DOE58_RS02710 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DOE58_RS02710 IPR000644 CBS domain DOE58_RS02710 IPR035474 KpsF-like, SIS domain DOE58_RS02715 IPR004837 Sodium/calcium exchanger membrane region DOE58_RS02715 IPR004481 Sodium/potassium/calcium exchanger DOE58_RS02720 IPR003439 ABC transporter-like DOE58_RS02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02720 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DOE58_RS02720 IPR017871 ABC transporter, conserved site DOE58_RS02720 IPR003593 AAA+ ATPase domain DOE58_RS02725 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DOE58_RS02725 IPR030802 ABC transporter permease MalE DOE58_RS02730 IPR003399 Mce/MlaD DOE58_RS02730 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD DOE58_RS02735 IPR042245 Tgt2/MlaC superfamily DOE58_RS02735 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DOE58_RS02740 IPR036513 STAS domain superfamily DOE58_RS02740 IPR002645 STAS domain DOE58_RS02745 IPR036065 BolA-like superfamily DOE58_RS02745 IPR002634 BolA protein DOE58_RS02750 IPR001986 Enolpyruvate transferase domain DOE58_RS02750 IPR036968 Enolpyruvate transferase domain superfamily DOE58_RS02750 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOE58_RS02750 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DOE58_RS02755 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DOE58_RS02755 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS02760 IPR033749 Polyprenyl synthetase, conserved site DOE58_RS02760 IPR008949 Isoprenoid synthase domain superfamily DOE58_RS02760 IPR000092 Polyprenyl synthetase DOE58_RS02765 IPR036164 L21-like superfamily DOE58_RS02765 IPR028909 Ribosomal protein L21-like DOE58_RS02765 IPR001787 Ribosomal protein L21 DOE58_RS02765 IPR018258 Ribosomal protein L21, conserved site DOE58_RS02770 IPR018261 Ribosomal protein L27, conserved site DOE58_RS02770 IPR001684 Ribosomal protein L27 DOE58_RS02775 IPR000620 EamA domain DOE58_RS02780 IPR036726 GTP1/OBG domain superfamily DOE58_RS02780 IPR006074 GTP1/OBG, conserved site DOE58_RS02780 IPR006169 GTP1/OBG domain DOE58_RS02780 IPR006073 GTP binding domain DOE58_RS02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02780 IPR014100 GTP-binding protein Obg/CgtA DOE58_RS02780 IPR035101 GTP-binding protein, Obg-type DOE58_RS02780 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOE58_RS02785 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C DOE58_RS02785 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS02790 IPR023459 Transcription elongation factor GreA/GreB family DOE58_RS02790 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE58_RS02790 IPR028624 Transcription elongation factor GreA/GreB DOE58_RS02790 IPR006359 Transcription elongation factor GreA DOE58_RS02790 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DOE58_RS02790 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE58_RS02790 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DOE58_RS02790 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DOE58_RS02795 IPR001890 RNA-binding, CRM domain DOE58_RS02795 IPR035920 YhbY-like superfamily DOE58_RS02795 IPR017924 RNA-binding protein YhbY DOE58_RS02800 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOE58_RS02800 IPR015507 Ribosomal RNA large subunit methyltransferase E DOE58_RS02800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS02800 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria DOE58_RS02810 IPR005936 Peptidase, FtsH DOE58_RS02810 IPR041569 AAA ATPase, AAA+ lid domain DOE58_RS02810 IPR003593 AAA+ ATPase domain DOE58_RS02810 IPR003960 ATPase, AAA-type, conserved site DOE58_RS02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02810 IPR003959 ATPase, AAA-type, core DOE58_RS02810 IPR011546 Peptidase M41, FtsH extracellular DOE58_RS02810 IPR000642 Peptidase M41 DOE58_RS02810 IPR037219 Peptidase M41-like DOE58_RS02815 IPR006390 Dihydropteroate synthase DOE58_RS02815 IPR011005 Dihydropteroate synthase-like DOE58_RS02815 IPR000489 Pterin-binding domain DOE58_RS02820 IPR006352 Phosphoglucosamine mutase, bacterial type DOE58_RS02820 IPR005841 Alpha-D-phosphohexomutase superfamily DOE58_RS02820 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE58_RS02820 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE58_RS02820 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE58_RS02820 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE58_RS02820 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE58_RS02820 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE58_RS02820 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE58_RS02825 IPR004692 Preprotein translocase SecG subunit DOE58_RS02840 IPR036515 Transposase IS200-like superfamily DOE58_RS02840 IPR002686 Transposase IS200-like DOE58_RS02850 IPR018223 Argininosuccinate synthase, conserved site DOE58_RS02850 IPR023437 Argininosuccinate synthase, type 2 subfamily DOE58_RS02850 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body DOE58_RS02850 IPR001518 Argininosuccinate synthase DOE58_RS02850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS02850 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail DOE58_RS02860 IPR028998 Ribosome maturation factor RimP, C-terminal DOE58_RS02860 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DOE58_RS02860 IPR028989 Ribosome maturation factor RimP, N-terminal DOE58_RS02860 IPR035956 RimP, N-terminal domain superfamily DOE58_RS02860 IPR003728 Ribosome maturation factor RimP DOE58_RS02865 IPR010213 Transcription termination factor NusA DOE58_RS02865 IPR010214 Transcription termination factor NusA, C-terminal duplication DOE58_RS02865 IPR013735 Transcription factor NusA, N-terminal DOE58_RS02865 IPR003029 S1 domain DOE58_RS02865 IPR022967 RNA-binding domain, S1 DOE58_RS02865 IPR025249 KH domain, NusA-like DOE58_RS02865 IPR015946 K homology domain-like, alpha/beta DOE58_RS02865 IPR036555 NusA, N-terminal domain superfamily DOE58_RS02865 IPR030842 Transcription termination/antitermination protein NusA, bacterial DOE58_RS02865 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DOE58_RS02865 IPR004087 K Homology domain DOE58_RS02865 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02865 IPR009019 K homology domain superfamily, prokaryotic type DOE58_RS02870 IPR023115 Translation initiation factor IF- 2, domain 3 DOE58_RS02870 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DOE58_RS02870 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS02870 IPR000178 Translation initiation factor aIF-2, bacterial-like DOE58_RS02870 IPR009061 Putative DNA-binding domain superfamily DOE58_RS02870 IPR013575 Initiation factor 2 associated domain, bacterial DOE58_RS02870 IPR006847 Translation initiation factor IF-2, N-terminal DOE58_RS02870 IPR015760 Translation initiation factor IF- 2 DOE58_RS02870 IPR005225 Small GTP-binding protein domain DOE58_RS02870 IPR000795 Transcription factor, GTP-binding domain DOE58_RS02870 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02875 IPR000238 Ribosome-binding factor A DOE58_RS02875 IPR023799 Ribosome-binding factor A domain superfamily DOE58_RS02875 IPR015946 K homology domain-like, alpha/beta DOE58_RS02875 IPR020053 Ribosome-binding factor A, conserved site DOE58_RS02880 IPR015947 PUA-like superfamily DOE58_RS02880 IPR002501 Pseudouridine synthase II, N-terminal DOE58_RS02880 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS02880 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal DOE58_RS02880 IPR032819 tRNA pseudouridylate synthase B, C-terminal DOE58_RS02880 IPR014780 tRNA pseudouridine synthase II, TruB DOE58_RS02880 IPR036974 PUA domain superfamily DOE58_RS02885 IPR000589 Ribosomal protein S15 DOE58_RS02885 IPR005290 Ribosomal protein S15, bacterial-type DOE58_RS02885 IPR009068 S15/NS1, RNA-binding DOE58_RS02890 IPR001247 Exoribonuclease, phosphorolytic domain 1 DOE58_RS02890 IPR004087 K Homology domain DOE58_RS02890 IPR036345 Exoribonuclease, PH domain 2 superfamily DOE58_RS02890 IPR004088 K Homology domain, type 1 DOE58_RS02890 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS02890 IPR036612 K Homology domain, type 1 superfamily DOE58_RS02890 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS02890 IPR012162 Polyribonucleotide nucleotidyltransferase DOE58_RS02890 IPR027408 PNPase/RNase PH domain superfamily DOE58_RS02890 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DOE58_RS02890 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily DOE58_RS02890 IPR022967 RNA-binding domain, S1 DOE58_RS02890 IPR015847 Exoribonuclease, phosphorolytic domain 2 DOE58_RS02890 IPR003029 S1 domain DOE58_RS02895 IPR019734 Tetratricopeptide repeat DOE58_RS02895 IPR013105 Tetratricopeptide repeat 2 DOE58_RS02895 IPR023605 Lipoprotein NlpI DOE58_RS02895 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS02895 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS02900 IPR011545 DEAD/DEAH box helicase domain DOE58_RS02900 IPR028618 ATP-dependent RNA helicase DeaD DOE58_RS02900 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS02900 IPR001650 Helicase, C-terminal DOE58_RS02900 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE58_RS02900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS02900 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE58_RS02900 IPR034415 CsdA, RNA recognition motif DOE58_RS02900 IPR021046 Cold-shock protein, DEAD box A, C-terminal DOE58_RS02900 IPR014014 RNA helicase, DEAD-box type, Q motif DOE58_RS02900 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOE58_RS02905 IPR013061 Tryptophan/tryrosine permease, conserved site DOE58_RS02905 IPR018227 Amino acid/polyamine transporter 2 DOE58_RS02905 IPR013059 Tryptophan/tyrosine transporter DOE58_RS02910 IPR036661 Luciferase-like domain superfamily DOE58_RS02910 IPR019949 Luciferase family oxidoreductase, group 1 DOE58_RS02910 IPR011251 Luciferase-like domain DOE58_RS02915 IPR001539 Peptidase U32 DOE58_RS02920 IPR001539 Peptidase U32 DOE58_RS02920 IPR036206 Thiamin phosphate synthase superfamily DOE58_RS02925 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 DOE58_RS02925 IPR036527 SCP2 sterol-binding domain superfamily DOE58_RS02925 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT DOE58_RS02925 IPR003033 SCP2 sterol-binding domain DOE58_RS02930 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS02930 IPR000182 GNAT domain DOE58_RS02935 IPR000305 GIY-YIG endonuclease DOE58_RS02935 IPR035901 GIY-YIG endonuclease superfamily DOE58_RS02935 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease DOE58_RS02940 IPR011194 Uncharacterised protein family UPF0306 DOE58_RS02940 IPR012349 FMN-binding split barrel DOE58_RS02945 IPR029062 Class I glutamine amidotransferase-like DOE58_RS02945 IPR002818 DJ-1/PfpI DOE58_RS02945 IPR006286 Deglycase PfpI DOE58_RS02950 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02950 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE58_RS02950 IPR016040 NAD(P)-binding domain DOE58_RS02955 IPR007055 BON domain DOE58_RS02955 IPR014004 Transport-associated and nodulation domain, bacteria DOE58_RS02960 IPR001347 Sugar isomerase (SIS) DOE58_RS02960 IPR035461 GmhA/DiaA DOE58_RS02960 IPR023070 DnaA initiator-associating protein DOE58_RS02965 IPR011856 tRNA endonuclease-like domain superfamily DOE58_RS02965 IPR003509 Uncharacterised protein family UPF0102 DOE58_RS02965 IPR011335 Restriction endonuclease type II-like DOE58_RS02970 IPR007443 Penicillin-binding protein activator LpoA DOE58_RS02970 IPR008939 Lytic transglycosylase, superhelical U-shaped DOE58_RS02970 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS02970 IPR028082 Periplasmic binding protein-like I DOE58_RS02975 IPR000878 Tetrapyrrole methylase DOE58_RS02975 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS02975 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DOE58_RS02975 IPR008189 rRNA small subunit methyltransferase I DOE58_RS02975 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE58_RS02975 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS02980 IPR001034 DeoR-type HTH domain DOE58_RS02980 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS02980 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS02980 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS02985 IPR011032 GroES-like superfamily DOE58_RS02985 IPR036291 NAD(P)-binding domain superfamily DOE58_RS02985 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS02985 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS02985 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS02985 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS02990 IPR013853 Galactitol permease IIC component DOE58_RS02990 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS02990 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS02995 IPR036095 PTS system IIB component-like superfamily DOE58_RS02995 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS02995 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS03000 IPR002178 PTS EIIA type-2 domain DOE58_RS03000 IPR016152 Phosphotransferase/anion transporter DOE58_RS03005 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ DOE58_RS03005 IPR013785 Aldolase-type TIM barrel DOE58_RS03005 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like DOE58_RS03010 IPR000771 Fructose-bisphosphate aldolase, class-II DOE58_RS03010 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY DOE58_RS03010 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY DOE58_RS03010 IPR013785 Aldolase-type TIM barrel DOE58_RS03015 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae DOE58_RS03015 IPR007392 D-galactarate/Altronate dehydratase, C-terminal DOE58_RS03015 IPR017654 Galactarate dehydratase GarD-like DOE58_RS03015 IPR013974 SAF domain DOE58_RS03040 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS03040 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS03040 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE58_RS03040 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE58_RS03040 IPR036291 NAD(P)-binding domain superfamily DOE58_RS03040 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE58_RS03040 IPR006398 2-hydroxy-3-oxopropionate reductase DOE58_RS03040 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE58_RS03045 IPR004381 Glycerate kinase DOE58_RS03045 IPR036129 Glycerate kinase superfamily DOE58_RS03045 IPR018193 Glycerate kinase, flavodoxin-like fold DOE58_RS03045 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE58_RS03070 IPR000847 Transcription regulator HTH, LysR DOE58_RS03070 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS03070 IPR005119 LysR, substrate-binding DOE58_RS03070 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS03075 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE58_RS03075 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS03075 IPR005789 Threonine dehydratase, catabolic DOE58_RS03075 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS03080 IPR018227 Amino acid/polyamine transporter 2 DOE58_RS03080 IPR023726 Threonine/serine transporter TdcC DOE58_RS03080 IPR004694 Hydroxy amino acid transporter DOE58_RS03120 IPR009679 Bacteriophage 186, CII DOE58_RS03130 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS03130 IPR032499 Bacteriophage CI repressor, C-terminal DOE58_RS03130 IPR010744 Bacteriophage CI repressor DOE58_RS03135 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS03135 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS03135 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS03135 IPR002104 Integrase, catalytic domain DOE58_RS03135 IPR010998 Integrase/recombinase, N-terminal DOE58_RS03135 IPR023009 Tyrosine recombinase XerC/XerD DOE58_RS03135 IPR011931 Tyrosine recombinase XerC DOE58_RS03145 IPR039374 Siderophore-interacting protein DOE58_RS03145 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS03145 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS03145 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS03145 IPR013113 FAD-binding 9, siderophore-interacting DOE58_RS03145 IPR007037 Siderophore-interacting protein, C-terminal domain DOE58_RS03150 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS03150 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS03150 IPR005149 Transcription regulator PadR, N-terminal DOE58_RS03155 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS03155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS03155 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS03155 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS03155 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS03155 IPR003660 HAMP domain DOE58_RS03160 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS03160 IPR013655 PAS fold-3 DOE58_RS03160 IPR035965 PAS domain superfamily DOE58_RS03160 IPR000014 PAS domain DOE58_RS03160 IPR001610 PAC motif DOE58_RS03160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS03160 IPR003660 HAMP domain DOE58_RS03170 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS03170 IPR017747 Putrescine aminotransferase DOE58_RS03170 IPR005814 Aminotransferase class-III DOE58_RS03170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS03170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS03175 IPR013785 Aldolase-type TIM barrel DOE58_RS03175 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS03175 IPR023753 FAD/NAD(P)-binding domain DOE58_RS03175 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOE58_RS03180 IPR007848 Methyltransferase small domain DOE58_RS03180 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS03180 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD DOE58_RS03180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS03185 IPR002725 Protein of unknown function DUF45 DOE58_RS03190 IPR003848 Domain of unknown function DUF218 DOE58_RS03195 IPR036291 NAD(P)-binding domain superfamily DOE58_RS03195 IPR000683 Oxidoreductase, N-terminal DOE58_RS03200 IPR005496 Integral membrane protein TerC DOE58_RS03200 IPR022369 Integral membrane protein TerC, riboswitch-linked DOE58_RS03205 IPR001991 Sodium:dicarboxylate symporter DOE58_RS03205 IPR036458 Sodium:dicarboxylate symporter superfamily DOE58_RS03205 IPR023025 Serine/threonine transporter SstT DOE58_RS03215 IPR032818 DedA family DOE58_RS03215 IPR032816 SNARE associated Golgi protein DOE58_RS03220 IPR027398 SecD export protein N-terminal TM domain DOE58_RS03220 IPR026574 Modulator protein MzrA DOE58_RS03225 IPR009468 Protein of unknown function DUF1090 DOE58_RS03230 IPR010279 Inner membrane protein YqjD/ElaB DOE58_RS03235 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III DOE58_RS03240 IPR025612 YqjK-like protein DOE58_RS03245 IPR032808 DoxX family DOE58_RS03250 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS03250 IPR036249 Thioredoxin-like superfamily DOE58_RS03250 IPR016639 Glutathione S-transferase Omega/GSH DOE58_RS03250 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS03250 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS03250 IPR040079 Glutathione Transferase family DOE58_RS03255 IPR008523 Protein of unknown function DUF805 DOE58_RS03260 IPR005119 LysR, substrate-binding DOE58_RS03260 IPR000847 Transcription regulator HTH, LysR DOE58_RS03260 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS03260 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS03265 IPR003829 Pirin, N-terminal domain DOE58_RS03265 IPR011051 RmlC-like cupin domain superfamily DOE58_RS03265 IPR012093 Pirin DOE58_RS03265 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DOE58_RS03265 IPR014710 RmlC-like jelly roll fold DOE58_RS03275 IPR005130 Serine dehydratase-like, alpha subunit DOE58_RS03275 IPR021144 Uncharacterised protein family UPF0597 DOE58_RS03285 IPR029009 Allosteric substrate binding domain superfamily DOE58_RS03285 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE58_RS03285 IPR005130 Serine dehydratase-like, alpha subunit DOE58_RS03285 IPR005131 Serine dehydratase beta chain DOE58_RS03290 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS03290 IPR001150 Glycine radical domain DOE58_RS03290 IPR005949 Formate acetyltransferase DOE58_RS03290 IPR004184 Pyruvate formate lyase domain DOE58_RS03295 IPR024917 Propionate kinase DOE58_RS03295 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE58_RS03295 IPR000890 Aliphatic acid kinase, short-chain DOE58_RS03295 IPR004372 Acetate/propionate kinase DOE58_RS03355 IPR030935 Phage portal protein PBSX family, Proteobacteria DOE58_RS03355 IPR006430 Phage portal protein PBSX family DOE58_RS03440 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE58_RS03440 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal DOE58_RS03440 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE58_RS03440 IPR011083 Phage tail collar domain DOE58_RS03440 IPR037053 Phage tail collar domain superfamily DOE58_RS03485 IPR007684 Zinc finger, Ogr/Delta-type DOE58_RS03495 IPR005122 Uracil-DNA glycosylase-like DOE58_RS03495 IPR015637 G/U mismatch-specific DNA glycosylase DOE58_RS03495 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial DOE58_RS03495 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOE58_RS03500 IPR042189 Sigma-70 factor, region 1.1 superfamily DOE58_RS03500 IPR013325 RNA polymerase sigma factor, region 2 DOE58_RS03500 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE58_RS03500 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DOE58_RS03500 IPR028630 RNA polymerase sigma factor RpoD DOE58_RS03500 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS03500 IPR007127 RNA polymerase sigma factor 70, region 1.1 DOE58_RS03500 IPR007631 RNA polymerase sigma factor 70, non-essential domain DOE58_RS03500 IPR007624 RNA polymerase sigma-70 region 3 DOE58_RS03500 IPR007627 RNA polymerase sigma-70 region 2 DOE58_RS03500 IPR009042 RNA polymerase sigma-70 region 1.2 DOE58_RS03500 IPR000943 RNA polymerase sigma-70 DOE58_RS03500 IPR014284 RNA polymerase sigma-70 like domain DOE58_RS03500 IPR007630 RNA polymerase sigma-70 region 4 DOE58_RS03505 IPR013173 DNA primase DnaG, DnaB-binding domain DOE58_RS03505 IPR006295 DNA primase, DnaG DOE58_RS03505 IPR019475 DNA primase, DnaB-helicase binding domain DOE58_RS03505 IPR036977 DNA Primase, CHC2-type zinc finger DOE58_RS03505 IPR030846 DNA primase DnaG, bacteria DOE58_RS03505 IPR002694 Zinc finger, CHC2-type DOE58_RS03505 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DOE58_RS03505 IPR013264 DNA primase, catalytic core, N-terminal DOE58_RS03505 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE58_RS03505 IPR006171 TOPRIM domain DOE58_RS03505 IPR034151 Bacterial DnaG primase, TOPRIM domain DOE58_RS03510 IPR038380 Ribosomal protein S21 superfamily DOE58_RS03510 IPR018278 Ribosomal protein S21, conserved site DOE58_RS03510 IPR001911 Ribosomal protein S21 DOE58_RS03515 IPR017861 Kae1/TsaD family DOE58_RS03515 IPR017860 Peptidase M22, conserved site DOE58_RS03515 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD DOE58_RS03515 IPR000905 Gcp-like domain DOE58_RS03525 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY DOE58_RS03530 IPR006157 Dihydroneopterin aldolase/epimerase domain DOE58_RS03530 IPR006156 Dihydroneopterin aldolase DOE58_RS03535 IPR003824 Undecaprenyl-diphosphatase UppP DOE58_RS03540 IPR002646 Poly A polymerase, head domain DOE58_RS03540 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOE58_RS03540 IPR003607 HD/PDEase domain DOE58_RS03540 IPR006674 HD domain DOE58_RS03540 IPR012006 tRNA nucleotidyltransferase, proteobacteria DOE58_RS03545 IPR016476 SH3 domain protein DOE58_RS03545 IPR003646 SH3-like domain, bacterial-type DOE58_RS03555 IPR039013 Inorganic triphosphatase YgiF DOE58_RS03555 IPR007899 CHAD domain DOE58_RS03555 IPR033469 CYTH-like domain superfamily DOE58_RS03555 IPR023577 CYTH domain DOE58_RS03560 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme DOE58_RS03560 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain DOE58_RS03560 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DOE58_RS03565 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS03565 IPR023030 Bifunctional protein HldE DOE58_RS03565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS03565 IPR029056 Ribokinase-like DOE58_RS03565 IPR011914 RfaE bifunctional protein, domain II DOE58_RS03565 IPR004821 Cytidyltransferase-like domain DOE58_RS03565 IPR011611 Carbohydrate kinase PfkB DOE58_RS03565 IPR011913 RfaE bifunctional protein, domain I DOE58_RS03575 IPR036013 Band 7/SPFH domain superfamily DOE58_RS03575 IPR031905 Flotillin, C-terminal domain DOE58_RS03575 IPR027705 Flotillin family DOE58_RS03575 IPR001107 Band 7 domain DOE58_RS03580 IPR010840 Protein of unknown function DUF1449 DOE58_RS03585 IPR015065 Surface composition regulator DOE58_RS03585 IPR036295 GlgS superfamily DOE58_RS03590 IPR007475 Ubiquinone biosynthesis accessory factor UbiK DOE58_RS03595 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DOE58_RS03595 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE58_RS03600 IPR023380 DsbB-like superfamily DOE58_RS03600 IPR023792 Protein-disulfide oxidoreductase DsbI DOE58_RS03600 IPR003752 Disulphide bond formation protein DsbB/BdbC DOE58_RS03605 IPR028588 Thiol:disulfide interchange protein DsbL DOE58_RS03605 IPR013766 Thioredoxin domain DOE58_RS03605 IPR036249 Thioredoxin-like superfamily DOE58_RS03605 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DOE58_RS03605 IPR001853 DSBA-like thioredoxin domain DOE58_RS03610 IPR038477 Arylsulfotransferase, N-terminal domain superfamily DOE58_RS03610 IPR035391 Arylsulfotransferase, Ig-like domain DOE58_RS03610 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria DOE58_RS03610 IPR010262 Arylsulfotransferase, bacteria DOE58_RS03620 IPR003689 Zinc/iron permease DOE58_RS03620 IPR023498 Zinc transporter ZupT DOE58_RS03625 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type DOE58_RS03625 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOE58_RS03630 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE58_RS03630 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS03635 IPR009576 Biofilm formation YgiB DOE58_RS03645 IPR010130 Type I secretion outer membrane protein, TolC DOE58_RS03645 IPR003423 Outer membrane efflux protein DOE58_RS03650 IPR020084 NUDIX hydrolase, conserved site DOE58_RS03650 IPR004385 Nucleoside diphosphate pyrophosphatase DOE58_RS03650 IPR000086 NUDIX hydrolase domain DOE58_RS03650 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS03655 IPR009659 Protein of unknown function DUF1249 DOE58_RS03660 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS03660 IPR029052 Metallo-dependent phosphatase-like DOE58_RS03660 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA DOE58_RS03665 IPR029058 Alpha/Beta hydrolase fold DOE58_RS03665 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DOE58_RS03670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS03670 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE58_RS03670 IPR001241 DNA topoisomerase, type IIA DOE58_RS03670 IPR002288 DNA gyrase B subunit, C-terminal DOE58_RS03670 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS03670 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DOE58_RS03670 IPR018522 DNA topoisomerase, type IIA, conserved site DOE58_RS03670 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DOE58_RS03670 IPR006171 TOPRIM domain DOE58_RS03670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS03670 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS03670 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DOE58_RS03675 IPR011008 Dimeric alpha-beta barrel DOE58_RS03675 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE58_RS03680 IPR003680 Flavodoxin-like fold DOE58_RS03680 IPR029039 Flavoprotein-like superfamily DOE58_RS03685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS03685 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS03685 IPR003660 HAMP domain DOE58_RS03685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS03685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS03685 IPR013727 Two-component sensor kinase, N-terminal DOE58_RS03685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS03685 IPR005467 Histidine kinase domain DOE58_RS03690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS03690 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS03690 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS03690 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS03690 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS03690 IPR011006 CheY-like superfamily DOE58_RS03695 IPR016052 Bacteriophage 933W, L0136 DOE58_RS03695 IPR005220 Bacterial OB-fold DOE58_RS03695 IPR036700 Bacterial OB-fold superfamily DOE58_RS03700 IPR029442 GyrI-like small molecule binding domain DOE58_RS03700 IPR011256 Regulatory factor, effector binding domain superfamily DOE58_RS03700 IPR010499 Bacterial transcription activator, effector binding DOE58_RS03705 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOE58_RS03705 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOE58_RS03705 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE58_RS03705 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE58_RS03705 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOE58_RS03705 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOE58_RS03705 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DOE58_RS03710 IPR002123 Phospholipid/glycerol acyltransferase DOE58_RS03710 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase DOE58_RS03715 IPR026589 Cell division protein FtsP DOE58_RS03715 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS03715 IPR001117 Multicopper oxidase, type 1 DOE58_RS03715 IPR011706 Multicopper oxidase, type 2 DOE58_RS03715 IPR011707 Multicopper oxidase, type 3 DOE58_RS03715 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS03715 IPR008972 Cupredoxin DOE58_RS03750 IPR001898 Solute carrier family 13 DOE58_RS03750 IPR030676 Citrate carrier CitT-related DOE58_RS03755 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS03755 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS03755 IPR020471 Aldo/keto reductase DOE58_RS03755 IPR018170 Aldo/keto reductase, conserved site DOE58_RS03760 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS03760 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS03765 IPR009057 Homeobox-like domain superfamily DOE58_RS03765 IPR009594 Transcription regulator HTH, AraC, N-terminal DOE58_RS03765 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS03770 IPR032816 SNARE associated Golgi protein DOE58_RS03770 IPR032818 DedA family DOE58_RS03775 IPR006233 Cystathionine beta-lyase, bacterial DOE58_RS03775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS03775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS03775 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS03775 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOE58_RS03785 IPR014164 TonB-system energizer ExbB type-1 DOE58_RS03785 IPR002898 MotA/TolQ/ExbB proton channel DOE58_RS03790 IPR014170 TonB system transport protein ExbD type-1 DOE58_RS03790 IPR003400 Biopolymer transport protein ExbD/TolR DOE58_RS03795 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS03795 IPR036291 NAD(P)-binding domain superfamily DOE58_RS03795 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS03815 IPR005134 Uncharacterised protein family UPF0114 DOE58_RS03815 IPR020761 Uncharacterised protein family UPF0114, bacteria DOE58_RS03820 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS03820 IPR003660 HAMP domain DOE58_RS03820 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS03820 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS03820 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS03820 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS03825 IPR022574 Protein of unknown function DUF2623 DOE58_RS03835 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE58_RS03835 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE58_RS03835 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE58_RS03835 IPR001821 [NiFe]-hydrogenase, small subunit DOE58_RS03835 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS03835 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS03835 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE58_RS03840 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS03840 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS03840 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS03845 IPR005614 NrfD family DOE58_RS03850 IPR001501 Nickel-dependent hydrogenase, large subunit DOE58_RS03850 IPR029014 [NiFe]-hydrogenase, large subunit DOE58_RS03850 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE58_RS03855 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE58_RS03855 IPR023430 Peptidase HybD-like domain superfamily DOE58_RS03855 IPR000671 Peptidase A31 family DOE58_RS03860 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE DOE58_RS03860 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily DOE58_RS03865 IPR000688 Hydrogenase maturation factor HypA/HybF DOE58_RS03865 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE58_RS03865 IPR039002 Hydrogenase maturation factor HybF DOE58_RS03870 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE58_RS03870 IPR037254 HupF/HypC superfamily DOE58_RS03870 IPR019812 Hydrogenase assembly chaperone, conserved site DOE58_RS03875 IPR002491 ABC transporter periplasmic binding domain DOE58_RS03885 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS03885 IPR040079 Glutathione Transferase family DOE58_RS03885 IPR036249 Thioredoxin-like superfamily DOE58_RS03885 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS03885 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS03890 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE58_RS03890 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS03890 IPR007921 CHAP domain DOE58_RS03890 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS03900 IPR003766 Uronate isomerase DOE58_RS03900 IPR032466 Metal-dependent hydrolase DOE58_RS03905 IPR023027 Mannitol dehydrogenase, conserved site DOE58_RS03905 IPR013118 Mannitol dehydrogenase, C-terminal DOE58_RS03905 IPR000669 Mannitol dehydrogenase DOE58_RS03905 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS03905 IPR013131 Mannitol dehydrogenase, N-terminal DOE58_RS03905 IPR036291 NAD(P)-binding domain superfamily DOE58_RS03905 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS03910 IPR036237 Xylose isomerase-like superfamily DOE58_RS03910 IPR004628 Mannonate dehydratase DOE58_RS03920 IPR011701 Major facilitator superfamily DOE58_RS03920 IPR020846 Major facilitator superfamily domain DOE58_RS03920 IPR036259 MFS transporter superfamily DOE58_RS03925 IPR005318 Outer membrane porin, bacterial DOE58_RS03925 IPR023614 Porin domain superfamily DOE58_RS03930 IPR036259 MFS transporter superfamily DOE58_RS03930 IPR039672 Lactose permease-like DOE58_RS03930 IPR001927 Sodium:galactoside symporter DOE58_RS03930 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS03935 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOE58_RS03935 IPR008979 Galactose-binding-like domain superfamily DOE58_RS03935 IPR023230 Glycoside hydrolase, family 2, conserved site DOE58_RS03935 IPR023232 Glycoside hydrolase, family 2, active site DOE58_RS03935 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DOE58_RS03935 IPR013783 Immunoglobulin-like fold DOE58_RS03935 IPR017853 Glycoside hydrolase superfamily DOE58_RS03935 IPR006104 Glycosyl hydrolases family 2, sugar binding domain DOE58_RS03935 IPR006103 Glycoside hydrolase family 2, catalytic domain DOE58_RS03935 IPR006101 Glycoside hydrolase, family 2 DOE58_RS03940 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS03940 IPR009057 Homeobox-like domain superfamily DOE58_RS03940 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS03940 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS03950 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS03950 IPR037950 Peptidoglycan deacetylase PgdA-like DOE58_RS03950 IPR002509 NodB homology domain DOE58_RS03965 IPR023776 Anti-adapter protein, IraD DOE58_RS03965 IPR007048 IraD/Gp25-like DOE58_RS03970 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS03970 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS03970 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS03970 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS03970 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS03970 IPR015590 Aldehyde dehydrogenase domain DOE58_RS03975 IPR006076 FAD dependent oxidoreductase DOE58_RS03975 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS03985 IPR002293 Amino acid/polyamine transporter I DOE58_RS03985 IPR004758 Amino acid transporter DOE58_RS03995 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS03995 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS03995 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04000 IPR007197 Radical SAM DOE58_RS04000 IPR023885 4Fe4S-binding SPASM domain DOE58_RS04000 IPR013785 Aldolase-type TIM barrel DOE58_RS04000 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE58_RS04005 IPR024607 Sulfatase, conserved site DOE58_RS04005 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS04005 IPR000917 Sulfatase, N-terminal DOE58_RS04010 IPR005119 LysR, substrate-binding DOE58_RS04010 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain DOE58_RS04010 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04010 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04010 IPR000847 Transcription regulator HTH, LysR DOE58_RS04015 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS04015 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS04015 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE58_RS04015 IPR011206 Citrate lyase beta subunit-like DOE58_RS04020 IPR029069 HotDog domain superfamily DOE58_RS04020 IPR002539 MaoC-like dehydratase domain DOE58_RS04020 IPR016790 Thiol ester hydratase, Rv0216, predicted DOE58_RS04025 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain DOE58_RS04025 IPR003702 Acetyl-CoA hydrolase/transferase DOE58_RS04025 IPR037171 NagB/RpiA transferase-like DOE58_RS04025 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily DOE58_RS04030 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE58_RS04030 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE58_RS04030 IPR037523 Vicinal oxygen chelate (VOC) domain DOE58_RS04040 IPR007563 Protein of unknown function DUF554 DOE58_RS04050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS04050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS04050 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS04050 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE58_RS04050 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE58_RS04050 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE58_RS04050 IPR011193 Ornithine/lysine/arginine decarboxylase DOE58_RS04050 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE58_RS04050 IPR011006 CheY-like superfamily DOE58_RS04050 IPR027464 Ornithine decarboxylase, N-terminal DOE58_RS04055 IPR033667 Nucleoside permease NupG DOE58_RS04055 IPR020846 Major facilitator superfamily domain DOE58_RS04055 IPR036259 MFS transporter superfamily DOE58_RS04055 IPR004740 Nucleoside:H+ symporter DOE58_RS04060 IPR023346 Lysozyme-like domain superfamily DOE58_RS04060 IPR023664 Murein transglycosylase-C DOE58_RS04060 IPR024570 Murein transglycosylase-C, N-terminal DOE58_RS04060 IPR000189 Prokaryotic transglycosylase, active site DOE58_RS04060 IPR008258 Transglycosylase SLT domain 1 DOE58_RS04065 IPR007457 Fe(II) trafficking protein YggX DOE58_RS04065 IPR036766 Fe(II) trafficking protein YggX superfamily DOE58_RS04070 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS04070 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOE58_RS04070 IPR005760 A/G-specific adenine glycosylase MutY DOE58_RS04070 IPR011257 DNA glycosylase DOE58_RS04070 IPR000445 Helix-hairpin-helix motif DOE58_RS04070 IPR004036 Endonuclease III-like, conserved site-2 DOE58_RS04070 IPR029119 MutY, C-terminal DOE58_RS04070 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE58_RS04070 IPR004035 Endonuclease III, iron-sulphur binding site DOE58_RS04070 IPR003265 HhH-GPD domain DOE58_RS04080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS04080 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type DOE58_RS04085 IPR007416 Protein of unknown function DUF469 DOE58_RS04090 IPR021307 Protein of unknown function DUF2884 DOE58_RS04095 IPR036152 Asparaginase/glutaminase-like superfamily DOE58_RS04095 IPR037152 L-asparaginase, N-terminal domain superfamily DOE58_RS04095 IPR004550 L-asparaginase, type II DOE58_RS04095 IPR020827 Asparaginase/glutaminase, active site 1 DOE58_RS04095 IPR027475 Asparaginase/glutaminase, active site 2 DOE58_RS04095 IPR006034 Asparaginase/glutaminase-like DOE58_RS04095 IPR027474 L-asparaginase, N-terminal DOE58_RS04095 IPR027473 L-asparaginase, C-terminal DOE58_RS04095 IPR040919 Asparaginase/glutaminase, C-terminal DOE58_RS04100 IPR009592 Protein of unknown function DUF1202 DOE58_RS04105 IPR007197 Radical SAM DOE58_RS04105 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOE58_RS04105 IPR006638 Elp3/MiaB/NifB DOE58_RS04105 IPR010723 HemN, C-terminal DOE58_RS04105 IPR004559 Heme chaperone HemW-like DOE58_RS04105 IPR023404 Radical SAM, alpha/beta horseshoe DOE58_RS04110 IPR002637 Ham1-like protein DOE58_RS04110 IPR029001 Inosine triphosphate pyrophosphatase-like DOE58_RS04110 IPR020922 dITP/XTP pyrophosphatase DOE58_RS04115 IPR036591 YggU-like superfamily DOE58_RS04115 IPR003746 Protein of unknown function DUF167 DOE58_RS04115 IPR005228 Conserved hypothetical protein CHP00251 DOE58_RS04120 IPR003425 CCB3/YggT DOE58_RS04125 IPR029066 PLP-binding barrel DOE58_RS04125 IPR011078 Pyridoxal phosphate homeostasis protein DOE58_RS04125 IPR001608 Alanine racemase, N-terminal DOE58_RS04130 IPR006321 Pilus retraction protein PilT DOE58_RS04130 IPR001482 Type II/IV secretion system protein DOE58_RS04130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04130 IPR003593 AAA+ ATPase domain DOE58_RS04140 IPR005227 Putative pre-16S rRNA nuclease DOE58_RS04140 IPR006641 YqgF/RNase H-like domain DOE58_RS04140 IPR037027 YqgF/RNase H-like domain superfamily DOE58_RS04140 IPR012337 Ribonuclease H-like superfamily DOE58_RS04145 IPR003774 Protein of unknown function UPF0301 DOE58_RS04150 IPR004218 Prokaryotic glutathione synthetase, ATP-binding DOE58_RS04150 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS04150 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS04150 IPR011761 ATP-grasp fold DOE58_RS04150 IPR006284 Glutathione synthetase, prokaryotic DOE58_RS04150 IPR004215 Prokaryotic glutathione synthetase, N-terminal DOE58_RS04155 IPR015947 PUA-like superfamily DOE58_RS04155 IPR006700 Ribosomal RNA small subunit methyltransferase E DOE58_RS04155 IPR029028 Alpha/beta knot methyltransferases DOE58_RS04155 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS04160 IPR007346 Endonuclease I DOE58_RS04165 IPR006640 SprT-like DOE58_RS04165 IPR035240 SprT-like, zinc ribbon domain DOE58_RS04165 IPR023483 Uncharacterised protein family SprT DOE58_RS04170 IPR003663 Sugar/inositol transporter DOE58_RS04170 IPR005829 Sugar transporter, conserved site DOE58_RS04170 IPR020846 Major facilitator superfamily domain DOE58_RS04170 IPR036259 MFS transporter superfamily DOE58_RS04170 IPR005828 Major facilitator, sugar transporter-like DOE58_RS04175 IPR022628 S-adenosylmethionine synthetase, N-terminal DOE58_RS04175 IPR022631 S-adenosylmethionine synthetase, conserved site DOE58_RS04175 IPR022630 S-adenosylmethionine synthetase, C-terminal DOE58_RS04175 IPR022629 S-adenosylmethionine synthetase, central domain DOE58_RS04175 IPR022636 S-adenosylmethionine synthetase superfamily DOE58_RS04175 IPR002133 S-adenosylmethionine synthetase DOE58_RS04195 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE58_RS04195 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DOE58_RS04195 IPR000183 Ornithine/DAP/Arg decarboxylase DOE58_RS04195 IPR029066 PLP-binding barrel DOE58_RS04195 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE58_RS04195 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOE58_RS04195 IPR041128 Arginine decarboxylase, C-terminal helical DOE58_RS04195 IPR002985 Arginine decarboxylase DOE58_RS04195 IPR040634 Arginine decarboxylase, helical bundle domain DOE58_RS04200 IPR005925 Agmatinase-related DOE58_RS04200 IPR020855 Ureohydrolase, manganese-binding site DOE58_RS04200 IPR023696 Ureohydrolase domain superfamily DOE58_RS04200 IPR023694 Agmatinase DOE58_RS04200 IPR006035 Ureohydrolase DOE58_RS04210 IPR001915 Peptidase M48 DOE58_RS04215 IPR029061 Thiamin diphosphate-binding fold DOE58_RS04215 IPR033248 Transketolase, C-terminal domain DOE58_RS04215 IPR005475 Transketolase-like, pyrimidine-binding domain DOE58_RS04215 IPR005478 Transketolase, bacterial-like DOE58_RS04215 IPR020826 Transketolase binding site DOE58_RS04215 IPR005474 Transketolase, N-terminal DOE58_RS04215 IPR033247 Transketolase family DOE58_RS04215 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS04225 IPR002178 PTS EIIA type-2 domain DOE58_RS04225 IPR016152 Phosphotransferase/anion transporter DOE58_RS04230 IPR003352 Phosphotransferase system, EIIC DOE58_RS04230 IPR036095 PTS system IIB component-like superfamily DOE58_RS04230 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS04230 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS04230 IPR029503 Phosphotransferase system EIIB component, mannitol-specific DOE58_RS04230 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC DOE58_RS04230 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS04235 IPR011032 GroES-like superfamily DOE58_RS04235 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS04235 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS04235 IPR036291 NAD(P)-binding domain superfamily DOE58_RS04240 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase DOE58_RS04250 IPR007761 Mannitol repressor MtlR-like DOE58_RS04250 IPR038026 MtlR-like superfamily DOE58_RS04255 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04260 IPR017871 ABC transporter, conserved site DOE58_RS04260 IPR003439 ABC transporter-like DOE58_RS04260 IPR003593 AAA+ ATPase domain DOE58_RS04265 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 DOE58_RS04265 IPR017871 ABC transporter, conserved site DOE58_RS04265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04265 IPR003593 AAA+ ATPase domain DOE58_RS04265 IPR003439 ABC transporter-like DOE58_RS04265 IPR015856 ABC transporter, CbiO/EcfA subunit DOE58_RS04290 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DOE58_RS04290 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DOE58_RS04290 IPR036291 NAD(P)-binding domain superfamily DOE58_RS04290 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DOE58_RS04290 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DOE58_RS04290 IPR006422 D-erythrose-4-phosphate dehydrogenase DOE58_RS04290 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DOE58_RS04295 IPR001576 Phosphoglycerate kinase DOE58_RS04295 IPR015911 Phosphoglycerate kinase, conserved site DOE58_RS04295 IPR015824 Phosphoglycerate kinase, N-terminal DOE58_RS04295 IPR036043 Phosphoglycerate kinase superfamily DOE58_RS04300 IPR013785 Aldolase-type TIM barrel DOE58_RS04300 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype DOE58_RS04300 IPR000771 Fructose-bisphosphate aldolase, class-II DOE58_RS04305 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS04305 IPR008910 Conserved TM helix DOE58_RS04305 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS04305 IPR006685 Mechanosensitive ion channel MscS DOE58_RS04305 IPR010920 LSM domain superfamily DOE58_RS04305 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS04305 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE58_RS04310 IPR023445 Arginine exporter protein ArgO, enterobacteria DOE58_RS04310 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS04310 IPR004777 L-lysine exporter/arginine exporter DOE58_RS04315 IPR007497 Protein of unknown function DUF541 DOE58_RS04320 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04320 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04320 IPR005119 LysR, substrate-binding DOE58_RS04320 IPR017685 HTH-type transcriptional regulator ArgP DOE58_RS04320 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria DOE58_RS04320 IPR000847 Transcription regulator HTH, LysR DOE58_RS04325 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup DOE58_RS04325 IPR004788 Ribose 5-phosphate isomerase, type A DOE58_RS04325 IPR037171 NagB/RpiA transferase-like DOE58_RS04330 IPR036291 NAD(P)-binding domain superfamily DOE58_RS04330 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE58_RS04330 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE58_RS04330 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE58_RS04330 IPR002912 ACT domain DOE58_RS04330 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE58_RS04335 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE58_RS04335 IPR037171 NagB/RpiA transferase-like DOE58_RS04335 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE58_RS04345 IPR007838 Cell division protein ZapA-like DOE58_RS04345 IPR036192 Cell division protein ZapA-like superfamily DOE58_RS04345 IPR023771 Cell division protein ZapA, eubacteria DOE58_RS04355 IPR036255 YgfB-like superfamily DOE58_RS04355 IPR011978 Uncharacterised protein family UPF0149 DOE58_RS04360 IPR001714 Peptidase M24, methionine aminopeptidase DOE58_RS04360 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE58_RS04360 IPR036005 Creatinase/aminopeptidase-like DOE58_RS04360 IPR007865 Aminopeptidase P, N-terminal DOE58_RS04360 IPR000994 Peptidase M24 DOE58_RS04360 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE58_RS04365 IPR002938 FAD-binding domain DOE58_RS04365 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE58_RS04365 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE58_RS04365 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase DOE58_RS04365 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS04370 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE58_RS04370 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS04370 IPR002938 FAD-binding domain DOE58_RS04370 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE58_RS04375 IPR022903 Glycine cleavage system T protein, bacteria DOE58_RS04375 IPR028896 Aminomethyltransferase-like DOE58_RS04375 IPR006223 Glycine cleavage system T protein DOE58_RS04375 IPR006222 Aminomethyltransferase, folate-binding domain DOE58_RS04375 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOE58_RS04375 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOE58_RS04375 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DOE58_RS04380 IPR000089 Biotin/lipoyl attachment DOE58_RS04380 IPR017453 Glycine cleavage system H-protein, subgroup DOE58_RS04380 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE58_RS04380 IPR011053 Single hybrid motif DOE58_RS04380 IPR002930 Glycine cleavage system H-protein DOE58_RS04380 IPR033753 Glycine cleavage system H-protein/Simiate DOE58_RS04385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS04385 IPR020581 Glycine cleavage system P protein DOE58_RS04385 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS04385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS04385 IPR003437 Glycine dehydrogenase (decarboxylating) DOE58_RS04400 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE58_RS04400 IPR018120 Glycoside hydrolase family 1, active site DOE58_RS04400 IPR001360 Glycoside hydrolase family 1 DOE58_RS04400 IPR017853 Glycoside hydrolase superfamily DOE58_RS04405 IPR007374 ASCH domain DOE58_RS04405 IPR015947 PUA-like superfamily DOE58_RS04405 IPR008314 Uncharacterised conserved protein UCP029143 DOE58_RS04410 IPR005744 Hly-III DOE58_RS04410 IPR004254 AdipoR/Haemolysin-III-related DOE58_RS04420 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOE58_RS04420 IPR017703 YgfZ/GcvT conserved site DOE58_RS04420 IPR006222 Aminomethyltransferase, folate-binding domain DOE58_RS04420 IPR023758 tRNA-modifying protein YgfZ DOE58_RS04430 IPR036714 Flavinator of succinate dehydrogenase superfamily DOE58_RS04430 IPR005631 Flavinator of succinate dehydrogenase DOE58_RS04435 IPR009883 Inner membrane protein YgfX DOE58_RS04440 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS04440 IPR001226 Flavodoxin, conserved site DOE58_RS04440 IPR010086 Flavodoxin, long chain DOE58_RS04440 IPR029039 Flavoprotein-like superfamily DOE58_RS04445 IPR010998 Integrase/recombinase, N-terminal DOE58_RS04445 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS04445 IPR011932 Tyrosine recombinase XerD DOE58_RS04445 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS04445 IPR023009 Tyrosine recombinase XerC/XerD DOE58_RS04445 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS04445 IPR002104 Integrase, catalytic domain DOE58_RS04450 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DOE58_RS04450 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DOE58_RS04450 IPR012336 Thioredoxin-like fold DOE58_RS04450 IPR033954 Disulphide bond isomerase, DsbC/G DOE58_RS04450 IPR017937 Thioredoxin, conserved site DOE58_RS04450 IPR036249 Thioredoxin-like superfamily DOE58_RS04455 IPR001667 DDH domain DOE58_RS04455 IPR041122 RecJ, OB domain DOE58_RS04455 IPR004610 Bacterial RecJ exonuclease DOE58_RS04455 IPR003156 DHHA1 domain DOE58_RS04455 IPR038763 DHH phosphoesterase superfamily DOE58_RS04465 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS04465 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE58_RS04465 IPR002313 Lysine-tRNA ligase, class II DOE58_RS04465 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOE58_RS04465 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE58_RS04465 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS04465 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II DOE58_RS04470 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 DOE58_RS04470 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS04470 IPR000086 NUDIX hydrolase domain DOE58_RS04480 IPR011055 Duplicated hybrid motif DOE58_RS04480 IPR016047 Peptidase M23 DOE58_RS04480 IPR018392 LysM domain DOE58_RS04480 IPR036779 LysM domain superfamily DOE58_RS04505 IPR000758 Virulence-related outer membrane protein DOE58_RS04505 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS04505 IPR027385 Outer membrane protein beta-barrel domain DOE58_RS04515 IPR000259 Fimbrial-type adhesion domain DOE58_RS04515 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS04515 IPR008966 Adhesion domain superfamily DOE58_RS04520 IPR025949 PapC-like, C-terminal domain DOE58_RS04520 IPR025885 PapC, N-terminal domain DOE58_RS04520 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS04520 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS04520 IPR000015 Outer membrane usher protein DOE58_RS04520 IPR037224 PapC, N-terminal domain superfamily DOE58_RS04525 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS04525 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS04525 IPR018046 Pili assembly chaperone, conserved site DOE58_RS04525 IPR008962 PapD-like superfamily DOE58_RS04525 IPR013783 Immunoglobulin-like fold DOE58_RS04525 IPR001829 Pili assembly chaperone, bacterial DOE58_RS04525 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS04545 IPR011541 Nickel/cobalt transporter, high-affinity DOE58_RS04550 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE58_RS04550 IPR003735 Metal-sensitive transcriptional repressor DOE58_RS04555 IPR018227 Amino acid/polyamine transporter 2 DOE58_RS04565 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04565 IPR005119 LysR, substrate-binding DOE58_RS04565 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04565 IPR000847 Transcription regulator HTH, LysR DOE58_RS04570 IPR020617 Thiolase, C-terminal DOE58_RS04570 IPR016039 Thiolase-like DOE58_RS04570 IPR020610 Thiolase, active site DOE58_RS04570 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE58_RS04570 IPR002155 Thiolase DOE58_RS04570 IPR020616 Thiolase, N-terminal DOE58_RS04570 IPR020613 Thiolase, conserved site DOE58_RS04580 IPR014710 RmlC-like jelly roll fold DOE58_RS04580 IPR011051 RmlC-like cupin domain superfamily DOE58_RS04580 IPR007045 5-keto 4-deoxyuronate isomerase DOE58_RS04580 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal DOE58_RS04580 IPR021120 KduI/IolB isomerase DOE58_RS04585 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS04585 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS04585 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DOE58_RS04585 IPR036291 NAD(P)-binding domain superfamily DOE58_RS04590 IPR020846 Major facilitator superfamily domain DOE58_RS04590 IPR005828 Major facilitator, sugar transporter-like DOE58_RS04590 IPR036259 MFS transporter superfamily DOE58_RS04590 IPR005829 Sugar transporter, conserved site DOE58_RS04590 IPR003663 Sugar/inositol transporter DOE58_RS04595 IPR001920 Asp/Glu racemase DOE58_RS04595 IPR004380 Aspartate racemase DOE58_RS04595 IPR033134 Asp/Glu racemase, active site 2 DOE58_RS04595 IPR018187 Asp/Glu racemase, active site 1 DOE58_RS04595 IPR015942 Asp/Glu/hydantoin racemase DOE58_RS04600 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04600 IPR000847 Transcription regulator HTH, LysR DOE58_RS04600 IPR005119 LysR, substrate-binding DOE58_RS04600 IPR037414 Transcriptional activator protein LysR, PBP2 domain DOE58_RS04600 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04605 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE58_RS04605 IPR000183 Ornithine/DAP/Arg decarboxylase DOE58_RS04605 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DOE58_RS04605 IPR029066 PLP-binding barrel DOE58_RS04605 IPR002986 Diaminopimelate decarboxylase, LysA DOE58_RS04605 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE58_RS04605 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DOE58_RS04605 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOE58_RS04610 IPR000843 LacI-type HTH domain DOE58_RS04610 IPR028082 Periplasmic binding protein-like I DOE58_RS04610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS04615 IPR028082 Periplasmic binding protein-like I DOE58_RS04615 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS04615 IPR000843 LacI-type HTH domain DOE58_RS04630 IPR000873 AMP-dependent synthetase/ligase DOE58_RS04630 IPR020845 AMP-binding, conserved site DOE58_RS04630 IPR023775 Bifunctional protein Aas DOE58_RS04630 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS04630 IPR002123 Phospholipid/glycerol acyltransferase DOE58_RS04635 IPR036259 MFS transporter superfamily DOE58_RS04635 IPR011701 Major facilitator superfamily DOE58_RS04635 IPR023727 Lysophospholipid transporter LplT DOE58_RS04640 IPR020471 Aldo/keto reductase DOE58_RS04640 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS04640 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS04645 IPR010920 LSM domain superfamily DOE58_RS04645 IPR010305 Protein of unknown function DUF903 DOE58_RS04650 IPR005496 Integral membrane protein TerC DOE58_RS04655 IPR004230 DNA mismatch repair protein MutH DOE58_RS04655 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II DOE58_RS04655 IPR011335 Restriction endonuclease type II-like DOE58_RS04655 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily DOE58_RS04660 IPR022927 RNA pyrophosphohydrolase RppH DOE58_RS04660 IPR020476 NUDIX hydrolase DOE58_RS04660 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS04660 IPR020084 NUDIX hydrolase, conserved site DOE58_RS04660 IPR000086 NUDIX hydrolase domain DOE58_RS04665 IPR008279 PEP-utilising enzyme, mobile domain DOE58_RS04665 IPR029016 GAF-like domain superfamily DOE58_RS04665 IPR018274 PEP-utilising enzyme, active site DOE58_RS04665 IPR003018 GAF domain DOE58_RS04665 IPR023151 PEP-utilising enzyme, conserved site DOE58_RS04665 IPR036618 PtsI, HPr-binding domain superfamily DOE58_RS04665 IPR000121 PEP-utilising enzyme, C-terminal DOE58_RS04665 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS04665 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE58_RS04665 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS04665 IPR036637 Phosphohistidine domain superfamily DOE58_RS04665 IPR006318 Phosphotransferase system, enzyme I-like DOE58_RS04670 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DOE58_RS04675 IPR020940 Thymidylate synthase, active site DOE58_RS04675 IPR000398 Thymidylate synthase DOE58_RS04675 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DOE58_RS04675 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DOE58_RS04685 IPR012902 Prokaryotic N-terminal methylation site DOE58_RS04690 IPR012902 Prokaryotic N-terminal methylation site DOE58_RS04690 IPR016419 Prepilin peptidase-dependent protein B, predicted DOE58_RS04695 IPR019652 Protein of unknown function DUF2509 DOE58_RS04700 IPR022204 Prepilin peptidase dependent protein C DOE58_RS04700 IPR012902 Prokaryotic N-terminal methylation site DOE58_RS04705 IPR011335 Restriction endonuclease type II-like DOE58_RS04705 IPR041500 RecC, C-terminal DOE58_RS04705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04705 IPR013986 DExx box DNA helicase domain superfamily DOE58_RS04705 IPR006697 RecBCD enzyme subunit RecC DOE58_RS04710 IPR007863 Peptidase M16, C-terminal DOE58_RS04710 IPR032632 Peptidase M16, middle/third domain DOE58_RS04710 IPR011765 Peptidase M16, N-terminal DOE58_RS04710 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE58_RS04715 IPR011335 Restriction endonuclease type II-like DOE58_RS04715 IPR014017 UvrD-like DNA helicase, C-terminal DOE58_RS04715 IPR000212 DNA helicase, UvrD/REP type DOE58_RS04715 IPR011604 Exonuclease, phage-type/RecB, C-terminal DOE58_RS04715 IPR034739 UvrD/AddA helicase, N-terminal DOE58_RS04715 IPR014016 UvrD-like helicase, ATP-binding domain DOE58_RS04715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04715 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE58_RS04715 IPR004586 RecBCD enzyme subunit RecB DOE58_RS04720 IPR003593 AAA+ ATPase domain DOE58_RS04720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04720 IPR006344 RecBCD enzyme subunit RecD DOE58_RS04720 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain DOE58_RS04720 IPR027785 UvrD-like helicase C-terminal domain DOE58_RS04725 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS04725 IPR033719 N-acetylglutamate synthase, kinase-like domain DOE58_RS04725 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS04725 IPR010167 Amino-acid N-acetyltransferase DOE58_RS04725 IPR000182 GNAT domain DOE58_RS04725 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS04730 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS04730 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE58_RS04730 IPR021731 AMIN domain DOE58_RS04740 IPR026044 Membrane-bound lytic murein transglycosylase A DOE58_RS04740 IPR010611 3D domain DOE58_RS04740 IPR034654 MltA, 3D domain DOE58_RS04740 IPR005300 Lytic transglycosylase MltA, domain B DOE58_RS04740 IPR036908 RlpA-like domain superfamily DOE58_RS04745 IPR000594 THIF-type NAD/FAD binding fold DOE58_RS04745 IPR035985 Ubiquitin-activating enzyme DOE58_RS04750 IPR000620 EamA domain DOE58_RS04750 IPR004626 RarD protein DOE58_RS04755 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE DOE58_RS04755 IPR003808 Fe-S metabolism associated domain, SufE-like DOE58_RS04760 IPR000192 Aminotransferase class V domain DOE58_RS04760 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE58_RS04760 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA DOE58_RS04760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS04760 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS04760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS04765 IPR010920 LSM domain superfamily DOE58_RS04765 IPR010305 Protein of unknown function DUF903 DOE58_RS04770 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04770 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04770 IPR000847 Transcription regulator HTH, LysR DOE58_RS04770 IPR005119 LysR, substrate-binding DOE58_RS04775 IPR006696 Protein of unknown function DUF423 DOE58_RS04780 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DOE58_RS04780 IPR011224 Ribosomal RNA large subunit methyltransferase M DOE58_RS04780 IPR040739 RlmM ferredoxin-like domain DOE58_RS04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS04785 IPR001034 DeoR-type HTH domain DOE58_RS04785 IPR014036 DeoR C-terminal sensor domain DOE58_RS04785 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS04785 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS04785 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS04785 IPR037171 NagB/RpiA transferase-like DOE58_RS04790 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU DOE58_RS04790 IPR023750 RbsD-like superfamily DOE58_RS04790 IPR023751 L-fucose mutarotase DOE58_RS04795 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE58_RS04795 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS04795 IPR013450 L-fuculokinase DOE58_RS04795 IPR000577 Carbohydrate kinase, FGGY DOE58_RS04795 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS04800 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE58_RS04800 IPR038393 L-fucose isomerase, domain 3 superfamily DOE58_RS04800 IPR015888 L-fucose isomerase, C-terminal DOE58_RS04800 IPR038391 L-fucose isomerase, domain 1 superfamily DOE58_RS04800 IPR012888 L-fucose isomerase, N-terminal-1 DOE58_RS04800 IPR005763 L-fucose isomerase DOE58_RS04800 IPR038392 L-fucose isomerase, domain 2 superfamily DOE58_RS04800 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily DOE58_RS04800 IPR012889 L-fucose isomerase, N-terminal-2 DOE58_RS04805 IPR020846 Major facilitator superfamily domain DOE58_RS04805 IPR036259 MFS transporter superfamily DOE58_RS04805 IPR005275 L-fucose permease FucP DOE58_RS04805 IPR011701 Major facilitator superfamily DOE58_RS04810 IPR004782 L-fucose phosphate aldolase DOE58_RS04810 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS04810 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS04815 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS04815 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS04815 IPR013460 Lactaldehyde reductase DOE58_RS04815 IPR039697 Iron-type alcohol dehydrogenase-like DOE58_RS04820 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOE58_RS04820 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE58_RS04820 IPR020045 DNA polymerase I-like, H3TH domain DOE58_RS04820 IPR002421 5'-3' exonuclease, N-terminal DOE58_RS04820 IPR022895 Flap endonuclease Xni DOE58_RS04820 IPR029060 PIN-like domain superfamily DOE58_RS04820 IPR008918 Helix-hairpin-helix motif, class 2 DOE58_RS04820 IPR038969 Flap endonuclease DOE58_RS04830 IPR005131 Serine dehydratase beta chain DOE58_RS04830 IPR029009 Allosteric substrate binding domain superfamily DOE58_RS04830 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE58_RS04830 IPR005130 Serine dehydratase-like, alpha subunit DOE58_RS04835 IPR004694 Hydroxy amino acid transporter DOE58_RS04840 IPR031100 LOG family DOE58_RS04840 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal DOE58_RS04840 IPR021826 Domain of unknown function DUF3412 DOE58_RS04840 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily DOE58_RS04845 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DOE58_RS04845 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DOE58_RS04845 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DOE58_RS04850 IPR009948 Syd DOE58_RS04850 IPR038228 Syd superfamily DOE58_RS04860 IPR007384 Protein of unknown function UCP006257 DOE58_RS04860 IPR023376 YqcC-like domain DOE58_RS04860 IPR036814 YqcC-like superfamily DOE58_RS04865 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS04865 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE58_RS04865 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS04870 IPR001094 Flavodoxin-like DOE58_RS04870 IPR029039 Flavoprotein-like superfamily DOE58_RS04870 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS04880 IPR000849 Sugar phosphate transporter DOE58_RS04880 IPR036259 MFS transporter superfamily DOE58_RS04880 IPR020846 Major facilitator superfamily domain DOE58_RS04880 IPR011701 Major facilitator superfamily DOE58_RS04885 IPR034593 Mandelate racemase-like DOE58_RS04885 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS04885 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS04885 IPR029065 Enolase C-terminal domain-like DOE58_RS04885 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS04885 IPR029017 Enolase-like, N-terminal DOE58_RS04885 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS04885 IPR034598 D-Glucarate dehydratase-like DOE58_RS04890 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS04890 IPR029017 Enolase-like, N-terminal DOE58_RS04890 IPR029065 Enolase C-terminal domain-like DOE58_RS04890 IPR017653 Glucarate dehydratase DOE58_RS04890 IPR034598 D-Glucarate dehydratase-like DOE58_RS04890 IPR034593 Mandelate racemase-like DOE58_RS04890 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS04895 IPR036129 Glycerate kinase superfamily DOE58_RS04895 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE58_RS04895 IPR018193 Glycerate kinase, flavodoxin-like fold DOE58_RS04895 IPR004381 Glycerate kinase DOE58_RS04900 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS04900 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS04900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS04900 IPR036641 HPT domain superfamily DOE58_RS04900 IPR019247 Histidine kinase BarA, N-terminal DOE58_RS04900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS04900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS04900 IPR005467 Histidine kinase domain DOE58_RS04900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS04900 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS04900 IPR003660 HAMP domain DOE58_RS04900 IPR011006 CheY-like superfamily DOE58_RS04905 IPR010280 (Uracil-5)-methyltransferase family DOE58_RS04905 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD DOE58_RS04905 IPR002792 TRAM domain DOE58_RS04905 IPR030390 RNA methyltransferase TrmA, active site DOE58_RS04905 IPR030391 RNA methyltransferase TrmA, conserved site DOE58_RS04905 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS04905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS04910 IPR012675 Beta-grasp domain superfamily DOE58_RS04910 IPR004811 RelA/SpoT family DOE58_RS04910 IPR007685 RelA/SpoT DOE58_RS04910 IPR002912 ACT domain DOE58_RS04910 IPR004095 TGS DOE58_RS04910 IPR012676 TGS-like DOE58_RS04910 IPR033655 RelA, TGS domain DOE58_RS04910 IPR003607 HD/PDEase domain DOE58_RS04915 IPR038296 Antitoxin ParD superfamily DOE58_RS04915 IPR022789 Antitoxin ParD DOE58_RS04915 IPR010985 Ribbon-helix-helix DOE58_RS04930 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOE58_RS04930 IPR011551 NTP pyrophosphohydrolase MazG DOE58_RS04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04935 IPR017926 Glutamine amidotransferase DOE58_RS04935 IPR017456 CTP synthase, N-terminal DOE58_RS04935 IPR004468 CTP synthase DOE58_RS04935 IPR029062 Class I glutamine amidotransferase-like DOE58_RS04935 IPR033828 CTP synthase GATase domain DOE58_RS04940 IPR020809 Enolase, conserved site DOE58_RS04940 IPR000941 Enolase DOE58_RS04940 IPR029017 Enolase-like, N-terminal DOE58_RS04940 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS04940 IPR020811 Enolase, N-terminal DOE58_RS04940 IPR020810 Enolase, C-terminal TIM barrel domain DOE58_RS04945 IPR024924 7-carboxy-7-deazaguanine synthase-like DOE58_RS04945 IPR013785 Aldolase-type TIM barrel DOE58_RS04945 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria DOE58_RS04945 IPR007197 Radical SAM DOE58_RS04950 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS04950 IPR020605 Octanoyltransferase, conserved site DOE58_RS04950 IPR000544 Octanoyltransferase DOE58_RS04950 IPR001279 Metallo-beta-lactamase DOE58_RS04950 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE58_RS04955 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family DOE58_RS04955 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily DOE58_RS04965 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS04965 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS04965 IPR029039 Flavoprotein-like superfamily DOE58_RS04965 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOE58_RS04965 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS04965 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily DOE58_RS04965 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain DOE58_RS04965 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS04965 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding DOE58_RS04965 IPR001094 Flavodoxin-like DOE58_RS04965 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria DOE58_RS04965 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS04970 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE58_RS04970 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE58_RS04970 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE58_RS04970 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit DOE58_RS04970 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE58_RS04980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS04980 IPR011800 Phosphoadenosine phosphosulphate reductase CysH DOE58_RS04980 IPR002500 Phosphoadenosine phosphosulphate reductase DOE58_RS04980 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DOE58_RS04985 IPR022747 Salmonella outer protein D DOE58_RS04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS04990 IPR006474 Helicase Cas3, CRISPR-associated, core DOE58_RS04990 IPR001650 Helicase, C-terminal DOE58_RS04990 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS04990 IPR011545 DEAD/DEAH box helicase domain DOE58_RS04990 IPR038257 CRISPR-associated Cas3-type HD domain superfamily DOE58_RS04990 IPR006483 CRISPR-associated Cas3-type HD domain DOE58_RS04990 IPR035011 CRISPR-associated endonuclease/helicase Cas3 DOE58_RS04995 IPR007484 Peptidase M28 DOE58_RS05000 IPR002500 Phosphoadenosine phosphosulphate reductase DOE58_RS05000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS05000 IPR011784 Sulphate adenylyltransferase, small subunit DOE58_RS05005 IPR031157 Tr-type G domain, conserved site DOE58_RS05005 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS05005 IPR000795 Transcription factor, GTP-binding domain DOE58_RS05005 IPR011779 Sulphate adenylyltransferase, large subunit DOE58_RS05005 IPR005225 Small GTP-binding protein domain DOE58_RS05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05005 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DOE58_RS05005 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE58_RS05010 IPR002891 Adenylyl-sulfate kinase DOE58_RS05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05015 IPR022721 Protein of unknown function DUF3561 DOE58_RS05020 IPR023081 Cell division protein FtsB DOE58_RS05020 IPR007060 Septum formation initiator FtsL/DivIC DOE58_RS05025 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DOE58_RS05025 IPR034683 Cytidylyltransferase IspD/TarI DOE58_RS05025 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS05025 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DOE58_RS05030 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DOE58_RS05030 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DOE58_RS05030 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DOE58_RS05035 IPR042214 Pseudouridine synthase, TruD, catalytic domain DOE58_RS05035 IPR011760 Pseudouridine synthase, TruD, insertion domain DOE58_RS05035 IPR001656 Pseudouridine synthase, TruD DOE58_RS05035 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS05035 IPR020119 Pseudouridine synthase TruD, conserved site DOE58_RS05040 IPR036523 SurE-like phosphatase/nucleotidase superfamily DOE58_RS05040 IPR030048 Survival protein SurE DOE58_RS05040 IPR002828 Survival protein SurE-like phosphatase/nucleotidase DOE58_RS05045 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DOE58_RS05045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS05050 IPR011055 Duplicated hybrid motif DOE58_RS05050 IPR016047 Peptidase M23 DOE58_RS05050 IPR036779 LysM domain superfamily DOE58_RS05050 IPR018392 LysM domain DOE58_RS05055 IPR007630 RNA polymerase sigma-70 region 4 DOE58_RS05055 IPR012761 RNA polymerase sigma factor RpoS DOE58_RS05055 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05055 IPR007624 RNA polymerase sigma-70 region 3 DOE58_RS05055 IPR007627 RNA polymerase sigma-70 region 2 DOE58_RS05055 IPR009042 RNA polymerase sigma-70 region 1.2 DOE58_RS05055 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE58_RS05055 IPR013325 RNA polymerase sigma factor, region 2 DOE58_RS05055 IPR000943 RNA polymerase sigma-70 DOE58_RS05055 IPR014284 RNA polymerase sigma-70 like domain DOE58_RS05065 IPR032902 Phenolic acid decarboxylase subunit C DOE58_RS05065 IPR002830 UbiD decarboxylyase family DOE58_RS05070 IPR003382 Flavoprotein DOE58_RS05070 IPR036551 Flavin prenyltransferase-like DOE58_RS05070 IPR004507 Flavin prenyltransferase UbiX-like DOE58_RS05070 IPR032901 Probable UbiX-like flavin prenyltransferase DOE58_RS05075 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05075 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05075 IPR000835 MarR-type HTH domain DOE58_RS05075 IPR023187 Transcriptional regulator MarR-type, conserved site DOE58_RS05080 IPR037171 NagB/RpiA transferase-like DOE58_RS05080 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS05080 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05080 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05080 IPR001034 DeoR-type HTH domain DOE58_RS05080 IPR014036 DeoR C-terminal sensor domain DOE58_RS05085 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE58_RS05085 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS05085 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS05085 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE58_RS05085 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE58_RS05085 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE58_RS05085 IPR036291 NAD(P)-binding domain superfamily DOE58_RS05090 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DOE58_RS05090 IPR042213 Nucleotide-binding, C-terminal domain superfamily DOE58_RS05090 IPR031475 Nucleotide-binding C-terminal domain DOE58_RS05090 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DOE58_RS05095 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS05095 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS05100 IPR036237 Xylose isomerase-like superfamily DOE58_RS05100 IPR026040 Hydroxypyruvate isomerase-like DOE58_RS05100 IPR013022 Xylose isomerase-like, TIM barrel domain DOE58_RS05105 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS05105 IPR036291 NAD(P)-binding domain superfamily DOE58_RS05110 IPR003474 Gluconate transporter DOE58_RS05115 IPR005119 LysR, substrate-binding DOE58_RS05115 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05115 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05115 IPR000847 Transcription regulator HTH, LysR DOE58_RS05120 IPR005829 Sugar transporter, conserved site DOE58_RS05120 IPR004638 Drug resistance transporter EmrB-like DOE58_RS05120 IPR036259 MFS transporter superfamily DOE58_RS05120 IPR011701 Major facilitator superfamily DOE58_RS05120 IPR020846 Major facilitator superfamily domain DOE58_RS05130 IPR007860 DNA mismatch repair protein MutS, connector domain DOE58_RS05130 IPR017261 DNA mismatch repair protein MutS/MSH DOE58_RS05130 IPR036678 MutS, connector domain superfamily DOE58_RS05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05130 IPR016151 DNA mismatch repair protein MutS, N-terminal DOE58_RS05130 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DOE58_RS05130 IPR005748 DNA mismatch repair protein MutS DOE58_RS05130 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOE58_RS05130 IPR007861 DNA mismatch repair protein MutS, clamp DOE58_RS05130 IPR000432 DNA mismatch repair protein MutS, C-terminal DOE58_RS05130 IPR007696 DNA mismatch repair protein MutS, core DOE58_RS05145 IPR029052 Metallo-dependent phosphatase-like DOE58_RS05145 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS05170 IPR006830 InvH outer membrane lipoprotein DOE58_RS05175 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS05175 IPR009057 Homeobox-like domain superfamily DOE58_RS05175 IPR018062 HTH domain AraC-type, conserved site DOE58_RS05180 IPR038591 NolW-like superfamily DOE58_RS05180 IPR005644 NolW-like DOE58_RS05180 IPR004846 Type II/III secretion system DOE58_RS05180 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOE58_RS05180 IPR004845 Type II secretion system GspD, conserved site DOE58_RS05185 IPR003520 Salmonella/Shigella invasion protein E DOE58_RS05185 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC DOE58_RS05185 IPR010812 Hypersensitivity response secretion-like, HrpJ DOE58_RS05190 IPR042193 FHIPEP, domain 3 DOE58_RS05190 IPR001712 Type III secretion system FHIPEP DOE58_RS05190 IPR025505 FHIPEP conserved site DOE58_RS05190 IPR042196 FHIPEP, domain 4 DOE58_RS05190 IPR006302 Type III secretion protein HrcV DOE58_RS05190 IPR042194 FHIPEP, domain 1 DOE58_RS05195 IPR003065 Surface presentation of antigens protein SpaK DOE58_RS05200 IPR040627 T3SS EscN ATPase, C-terminal DOE58_RS05200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05200 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS05200 IPR003593 AAA+ ATPase domain DOE58_RS05200 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE58_RS05200 IPR005714 ATPase, type III secretion system, FliI/YscN DOE58_RS05200 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE58_RS05205 IPR002954 Salmonella surface presentation of antigen M protein DOE58_RS05210 IPR003066 Salmonella invasion protein InvJ DOE58_RS05215 IPR003283 Type III secretion system outer membrane, SpaO DOE58_RS05215 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO DOE58_RS05215 IPR001543 Surface presentation of antigen (SpoA) DOE58_RS05215 IPR036429 SpoA-like superfamily DOE58_RS05220 IPR005838 Type III secretion system inner membrane P protein DOE58_RS05220 IPR005773 Yop virulence translocation protein R DOE58_RS05225 IPR006306 Type III secretion protein HrpO DOE58_RS05225 IPR002191 Bacterial export protein family 3 DOE58_RS05250 IPR006135 Type III secretion system substrate exporter DOE58_RS05250 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOE58_RS05250 IPR029025 Type III secretion system substrate exporter, C-terminal DOE58_RS05255 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DOE58_RS05255 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS05255 IPR011716 Tetratricopeptide TPR-3 DOE58_RS05255 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup DOE58_RS05260 IPR006972 Secretion system effector C, SseC-like DOE58_RS05260 IPR003895 Type III secretion system, invasin protein B DOE58_RS05260 IPR032391 Invasin IpaB, N-terminal DOE58_RS05265 IPR005427 Salmonella/Shigella invasin protein C DOE58_RS05270 IPR009483 Type III secretion systems tip complex components DOE58_RS05270 IPR036708 BipD-like superfamily DOE58_RS05275 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain superfamily DOE58_RS05275 IPR023225 Salmonella invasion protein A, chaperone-binding DOE58_RS05275 IPR015138 Salmonella invasion protein A, N-terminal DOE58_RS05280 IPR036736 ACP-like superfamily DOE58_RS05280 IPR009081 Phosphopantetheine binding ACP domain DOE58_RS05290 IPR010261 Tir chaperone protein (CesT) family DOE58_RS05295 IPR000242 PTP type protein phosphatase DOE58_RS05295 IPR011070 Globular protein, non-globular alpha/beta subunit DOE58_RS05295 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH DOE58_RS05295 IPR000387 Tyrosine specific protein phosphatases domain DOE58_RS05295 IPR003595 Protein-tyrosine phosphatase, catalytic DOE58_RS05295 IPR029021 Protein-tyrosine phosphatase-like DOE58_RS05295 IPR015203 SicP binding DOE58_RS05295 IPR037168 Virulence factor YopE, GAP domain superfamily DOE58_RS05295 IPR014773 Virulence factor YopE, GAP domain DOE58_RS05295 IPR016130 Protein-tyrosine phosphatase, active site DOE58_RS05300 IPR023346 Lysozyme-like domain superfamily DOE58_RS05300 IPR008258 Transglycosylase SLT domain 1 DOE58_RS05305 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS05305 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS05305 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS05305 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS05305 IPR019734 Tetratricopeptide repeat DOE58_RS05305 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS05305 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05310 IPR009057 Homeobox-like domain superfamily DOE58_RS05310 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS05310 IPR018062 HTH domain AraC-type, conserved site DOE58_RS05310 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS05315 IPR013387 Type III secretion system, PrgH/EprH DOE58_RS05315 IPR019029 Type III secretion system, PrgH/EprH-like DOE58_RS05320 IPR011841 Type III secretion system, needle protein DOE58_RS05320 IPR037203 Type III secretion, needle-protein-like superfamily DOE58_RS05320 IPR021123 Type III secretion, needle-protein-like DOE58_RS05330 IPR006182 Secretory protein YscJ/FliF DOE58_RS05330 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOE58_RS05335 IPR013388 Type III secretion apparatus protein OrgA/MxiK DOE58_RS05350 IPR018062 HTH domain AraC-type, conserved site DOE58_RS05350 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS05350 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS05350 IPR009057 Homeobox-like domain superfamily DOE58_RS05390 IPR037294 ABC transporter, BtuC-like DOE58_RS05390 IPR001626 ABC transporter, TroCD-like DOE58_RS05395 IPR037294 ABC transporter, BtuC-like DOE58_RS05395 IPR001626 ABC transporter, TroCD-like DOE58_RS05400 IPR003593 AAA+ ATPase domain DOE58_RS05400 IPR003439 ABC transporter-like DOE58_RS05400 IPR017871 ABC transporter, conserved site DOE58_RS05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05405 IPR006129 Adhesin B DOE58_RS05405 IPR006127 Periplasmic solute binding protein, ZnuA-like DOE58_RS05405 IPR006128 Adhesion lipoprotein DOE58_RS05410 IPR020483 Uncharacterised protein family YgbA DOE58_RS05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05415 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS05415 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS05415 IPR009057 Homeobox-like domain superfamily DOE58_RS05415 IPR029016 GAF-like domain superfamily DOE58_RS05415 IPR003018 GAF domain DOE58_RS05415 IPR003593 AAA+ ATPase domain DOE58_RS05415 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS05415 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS05420 IPR011854 Carbamoyl dehydratase HypE DOE58_RS05420 IPR036921 PurM-like, N-terminal domain superfamily DOE58_RS05420 IPR016188 PurM-like, N-terminal domain DOE58_RS05420 IPR010918 PurM-like, C-terminal domain DOE58_RS05420 IPR036676 PurM-like, C-terminal domain superfamily DOE58_RS05425 IPR002780 Hydrogenase formation HypD protein DOE58_RS05425 IPR042244 HypD, domain 1 DOE58_RS05425 IPR042243 HypD, domain 2 DOE58_RS05430 IPR019812 Hydrogenase assembly chaperone, conserved site DOE58_RS05430 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE58_RS05430 IPR037254 HupF/HypC superfamily DOE58_RS05435 IPR004392 Hydrogenase maturation factor HypB DOE58_RS05435 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE58_RS05435 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05440 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE58_RS05440 IPR000688 Hydrogenase maturation factor HypA/HybF DOE58_RS05450 IPR021285 Transcription regulator, HycA DOE58_RS05455 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS05455 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS05460 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE58_RS05460 IPR003918 NADH:ubiquinone oxidoreductase DOE58_RS05465 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DOE58_RS05465 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DOE58_RS05470 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DOE58_RS05470 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DOE58_RS05470 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DOE58_RS05470 IPR001135 NADH-quinone oxidoreductase, subunit D DOE58_RS05470 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DOE58_RS05470 IPR029014 [NiFe]-hydrogenase, large subunit DOE58_RS05470 IPR001501 Nickel-dependent hydrogenase, large subunit DOE58_RS05475 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS05475 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS05475 IPR010226 NADH-quinone oxidoreductase, chain I DOE58_RS05480 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DOE58_RS05480 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE58_RS05485 IPR010005 Formate hydrogenlyase maturation HycH DOE58_RS05490 IPR023430 Peptidase HybD-like domain superfamily DOE58_RS05490 IPR000671 Peptidase A31 family DOE58_RS05490 IPR004420 Peptidase A31, hydrogenase maturation protease HycI DOE58_RS05500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS05500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS05505 IPR011125 Zinc finger, HypF-type DOE58_RS05505 IPR006070 YrdC-like domain DOE58_RS05505 IPR001792 Acylphosphatase-like domain DOE58_RS05505 IPR004421 Carbamoyltransferase, HypF-type DOE58_RS05505 IPR041440 HypF, Kae1-like domain DOE58_RS05505 IPR017968 Acylphosphatase, conserved site DOE58_RS05505 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE58_RS05505 IPR036046 Acylphosphatase-like domain superfamily DOE58_RS05510 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS05510 IPR041364 Rubredoxin binding domain DOE58_RS05510 IPR023753 FAD/NAD(P)-binding domain DOE58_RS05510 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase DOE58_RS05515 IPR016440 Rubredoxin-oxygen oxidoreductase DOE58_RS05515 IPR001279 Metallo-beta-lactamase DOE58_RS05515 IPR024935 Rubredoxin domain DOE58_RS05515 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS05515 IPR029039 Flavoprotein-like superfamily DOE58_RS05515 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS05515 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin DOE58_RS05515 IPR024934 Rubredoxin-like domain DOE58_RS05520 IPR003018 GAF domain DOE58_RS05520 IPR009057 Homeobox-like domain superfamily DOE58_RS05520 IPR029016 GAF-like domain superfamily DOE58_RS05520 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS05520 IPR023944 Anaerobic nitric oxide reductase transcription regulator DOE58_RS05520 IPR003593 AAA+ ATPase domain DOE58_RS05520 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS05520 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS05520 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05525 IPR000644 CBS domain DOE58_RS05525 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DOE58_RS05525 IPR001347 Sugar isomerase (SIS) DOE58_RS05525 IPR035474 KpsF-like, SIS domain DOE58_RS05530 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS05530 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05530 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05530 IPR001034 DeoR-type HTH domain DOE58_RS05530 IPR014036 DeoR C-terminal sensor domain DOE58_RS05530 IPR037171 NagB/RpiA transferase-like DOE58_RS05535 IPR009693 Glucitol operon activator DOE58_RS05540 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS05540 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS05540 IPR036291 NAD(P)-binding domain superfamily DOE58_RS05545 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup DOE58_RS05545 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component DOE58_RS05545 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily DOE58_RS05550 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal DOE58_RS05550 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal DOE58_RS05550 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II DOE58_RS05555 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor DOE58_RS05560 IPR031304 Transglycosylase SLT domain 2 DOE58_RS05560 IPR023346 Lysozyme-like domain superfamily DOE58_RS05560 IPR011757 Lytic transglycosylase MltB DOE58_RS05570 IPR036653 CinA-like, C-terminal DOE58_RS05570 IPR008136 CinA, C-terminal DOE58_RS05575 IPR020584 DNA recombination/repair protein RecA, conserved site DOE58_RS05575 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DOE58_RS05575 IPR023400 DNA recombination and repair protein RecA, C-terminal DOE58_RS05575 IPR013765 DNA recombination and repair protein RecA DOE58_RS05575 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05575 IPR003593 AAA+ ATPase domain DOE58_RS05575 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOE58_RS05580 IPR003783 Regulatory protein RecX DOE58_RS05580 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05590 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOE58_RS05590 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DOE58_RS05590 IPR003156 DHHA1 domain DOE58_RS05590 IPR002318 Alanine-tRNA ligase, class IIc DOE58_RS05590 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DOE58_RS05590 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOE58_RS05590 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS05590 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DOE58_RS05590 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DOE58_RS05595 IPR003751 Translational regulator CsrA DOE58_RS05595 IPR036107 Carbon storage regulator superfamily DOE58_RS05630 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS05630 IPR010976 Beta-phosphoglucomutase hydrolase DOE58_RS05630 IPR023214 HAD superfamily DOE58_RS05630 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS05630 IPR006439 HAD hydrolase, subfamily IA DOE58_RS05630 IPR036412 HAD-like superfamily DOE58_RS05635 IPR032816 SNARE associated Golgi protein DOE58_RS05640 IPR006334 Glutamate--cysteine ligase, monofunctional DOE58_RS05640 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE58_RS05640 IPR007370 Glutamate--cysteine ligase DOE58_RS05645 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like DOE58_RS05645 IPR003815 S-ribosylhomocysteinase (LuxS) DOE58_RS05645 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily DOE58_RS05655 IPR011701 Major facilitator superfamily DOE58_RS05655 IPR004638 Drug resistance transporter EmrB-like DOE58_RS05655 IPR036259 MFS transporter superfamily DOE58_RS05655 IPR020846 Major facilitator superfamily domain DOE58_RS05660 IPR005694 Efflux pump membrane protein DOE58_RS05660 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS05665 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05665 IPR000835 MarR-type HTH domain DOE58_RS05665 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05665 IPR023187 Transcriptional regulator MarR-type, conserved site DOE58_RS05670 IPR011701 Major facilitator superfamily DOE58_RS05670 IPR020846 Major facilitator superfamily domain DOE58_RS05670 IPR036259 MFS transporter superfamily DOE58_RS05675 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE58_RS05680 IPR035906 MetI-like superfamily DOE58_RS05680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS05685 IPR003593 AAA+ ATPase domain DOE58_RS05685 IPR003439 ABC transporter-like DOE58_RS05685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05685 IPR005892 Glycine betaine transport ATP-binding subunit DOE58_RS05685 IPR000644 CBS domain DOE58_RS05685 IPR017871 ABC transporter, conserved site DOE58_RS05695 IPR012348 Ribonucleotide reductase-like DOE58_RS05695 IPR026494 Ribonucleoside reductase subunit beta, NrdF DOE58_RS05695 IPR000358 Ribonucleotide reductase small subunit family DOE58_RS05695 IPR030475 Ribonucleotide reductase small subunit, acitve site DOE58_RS05695 IPR009078 Ferritin-like superfamily DOE58_RS05695 IPR033909 Ribonucleotide reductase small subunit DOE58_RS05700 IPR013346 Ribonucleotide reductase, class I , alpha subunit DOE58_RS05700 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DOE58_RS05700 IPR013509 Ribonucleotide reductase large subunit, N-terminal DOE58_RS05700 IPR039718 Ribonucleoside-diphosphate reductase large subunit DOE58_RS05700 IPR000788 Ribonucleotide reductase large subunit, C-terminal DOE58_RS05700 IPR013554 Ribonucleotide reductase N-terminal DOE58_RS05700 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE DOE58_RS05705 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial DOE58_RS05705 IPR004465 Ribonucleotide reductase Class Ib, NrdI DOE58_RS05705 IPR029039 Flavoprotein-like superfamily DOE58_RS05710 IPR002109 Glutaredoxin DOE58_RS05710 IPR036249 Thioredoxin-like superfamily DOE58_RS05710 IPR011909 Glutaredoxin-like protein NrdH DOE58_RS05720 IPR029032 AhpD-like DOE58_RS05720 IPR003779 Carboxymuconolactone decarboxylase-like DOE58_RS05720 IPR004675 Alkylhydroperoxidase AhpD core DOE58_RS05725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS05725 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS05725 IPR004839 Aminotransferase, class I/classII DOE58_RS05725 IPR000524 Transcription regulator HTH, GntR DOE58_RS05725 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05725 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05730 IPR010279 Inner membrane protein YqjD/ElaB DOE58_RS05735 IPR018994 Protein of unknown function DUF2002 DOE58_RS05740 IPR010574 L-alanine exporter AlaE DOE58_RS05750 IPR001801 Histone-like protein H-NS DOE58_RS05750 IPR027454 Histone-like protein H-NS, N-terminal DOE58_RS05750 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOE58_RS05750 IPR027444 Histone-like protein H-NS, C-terminal domain DOE58_RS05760 IPR036873 Rhodanese-like domain superfamily DOE58_RS05760 IPR001763 Rhodanese-like domain DOE58_RS05760 IPR021309 Protein of unknown function DUF2892 DOE58_RS05765 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS05765 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05765 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05765 IPR001845 HTH ArsR-type DNA-binding domain DOE58_RS05770 IPR000612 Proteolipid membrane potential modulator DOE58_RS05780 IPR014004 Transport-associated and nodulation domain, bacteria DOE58_RS05780 IPR036779 LysM domain superfamily DOE58_RS05780 IPR018392 LysM domain DOE58_RS05780 IPR007055 BON domain DOE58_RS05785 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS05785 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS05785 IPR011711 GntR, C-terminal DOE58_RS05785 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05785 IPR000524 Transcription regulator HTH, GntR DOE58_RS05790 IPR011265 GABA permease DOE58_RS05790 IPR004840 Amino acid permease, conserved site DOE58_RS05790 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS05795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS05795 IPR005814 Aminotransferase class-III DOE58_RS05795 IPR004632 4-aminobutyrate aminotransferase, bacterial DOE58_RS05795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS05795 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS05800 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS05800 IPR010102 Succinate semialdehyde dehydrogenase DOE58_RS05800 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS05800 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS05800 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS05800 IPR015590 Aldehyde dehydrogenase domain DOE58_RS05800 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS05805 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS05805 IPR006076 FAD dependent oxidoreductase DOE58_RS05805 IPR030862 L-2-hydroxyglutarate dehydrogenase DOE58_RS05810 IPR042098 Taurine dioxygenase TauD-like superfamily DOE58_RS05810 IPR015038 Glutarate 2-hydroxylase GlaH DOE58_RS05815 IPR002823 Protein of unknown function DUF112, transmembrane DOE58_RS05830 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS05830 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS05830 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS05830 IPR011006 CheY-like superfamily DOE58_RS05830 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS05830 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS05835 IPR005467 Histidine kinase domain DOE58_RS05835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS05835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS05835 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS05835 IPR003660 HAMP domain DOE58_RS05835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS05835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS05840 IPR004688 Transition metal uptake transporter nickel/cobalt DOE58_RS05840 IPR011541 Nickel/cobalt transporter, high-affinity DOE58_RS05855 IPR007488 Protein of unknown function DUF535 DOE58_RS05860 IPR001646 Pentapeptide repeat DOE58_RS05870 IPR012910 TonB-dependent receptor, plug domain DOE58_RS05870 IPR010105 TonB-dependent siderophore receptor DOE58_RS05870 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS05870 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS05870 IPR039426 Vitamin B12 transporter BtuB-like DOE58_RS05870 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS05870 IPR010917 TonB-dependent receptor, conserved site DOE58_RS05875 IPR029058 Alpha/Beta hydrolase fold DOE58_RS05875 IPR000801 Putative esterase DOE58_RS05885 IPR039421 Type I protein exporter DOE58_RS05885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS05885 IPR017871 ABC transporter, conserved site DOE58_RS05885 IPR003439 ABC transporter-like DOE58_RS05885 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS05885 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS05885 IPR003593 AAA+ ATPase domain DOE58_RS05890 IPR030953 Glycosyltransferase, activator-dependent family DOE58_RS05890 IPR010610 Domain of unknown function DUF1205 DOE58_RS05895 IPR006118 Recombinase, conserved site DOE58_RS05895 IPR009057 Homeobox-like domain superfamily DOE58_RS05895 IPR006119 Resolvase, N-terminal catalytic domain DOE58_RS05895 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOE58_RS05895 IPR006120 Resolvase, HTH domain DOE58_RS05900 IPR001492 Flagellin DOE58_RS05900 IPR001029 Flagellin, D0/D1 domain DOE58_RS05900 IPR014981 Flagellin D3 DOE58_RS05905 IPR003223 Flagellin phase1 repressor DOE58_RS05935 IPR000477 Reverse transcriptase domain DOE58_RS05935 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA DOE58_RS06005 IPR029017 Enolase-like, N-terminal DOE58_RS06005 IPR007001 Bacterial shufflon protein, N-terminal DOE58_RS06020 IPR010998 Integrase/recombinase, N-terminal DOE58_RS06020 IPR038488 Integrase, DNA-binding domain superfamily DOE58_RS06020 IPR025166 Integrase, DNA-binding domain DOE58_RS06020 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS06020 IPR002104 Integrase, catalytic domain DOE58_RS06020 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS06030 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS06030 IPR010129 Type I secretion membrane fusion protein, HlyD family DOE58_RS06035 IPR003593 AAA+ ATPase domain DOE58_RS06035 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS06035 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS06035 IPR003439 ABC transporter-like DOE58_RS06035 IPR017871 ABC transporter, conserved site DOE58_RS06035 IPR011917 ABC transporter, lipid A export, MsbA DOE58_RS06035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06050 IPR020081 SsrA-binding protein, conserved site DOE58_RS06050 IPR000037 SsrA-binding protein DOE58_RS06050 IPR023620 Small protein B DOE58_RS06055 IPR023393 START-like domain superfamily DOE58_RS06055 IPR005031 Coenzyme Q-binding protein COQ10, START domain DOE58_RS06060 IPR037021 RnfH superfamily DOE58_RS06060 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE58_RS06060 IPR005346 RnfH protein DOE58_RS06065 IPR007450 Lipoprotein SmpA/OmlA DOE58_RS06065 IPR037873 BamE-like DOE58_RS06065 IPR026592 Outer membrane protein assembly factor BamE DOE58_RS06070 IPR004604 DNA recombination/repair protein RecN DOE58_RS06070 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06070 IPR003395 RecF/RecN/SMC, N-terminal DOE58_RS06075 IPR002504 NAD kinase DOE58_RS06075 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE58_RS06075 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DOE58_RS06075 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOE58_RS06085 IPR000740 GrpE nucleotide exchange factor DOE58_RS06085 IPR013805 GrpE nucleotide exchange factor, coiled-coil DOE58_RS06085 IPR009012 GrpE nucleotide exchange factor, head DOE58_RS06095 IPR000644 CBS domain DOE58_RS06095 IPR002550 CNNM, transmembrane domain DOE58_RS06095 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS06095 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS06095 IPR005170 Transporter-associated domain DOE58_RS06100 IPR002541 Cytochrome c assembly protein DOE58_RS06110 IPR003593 AAA+ ATPase domain DOE58_RS06110 IPR022941 Signal recognition particle, SRP54 subunit DOE58_RS06110 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DOE58_RS06110 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DOE58_RS06110 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DOE58_RS06110 IPR004780 Signal recognition particle protein DOE58_RS06110 IPR013822 Signal recognition particle SRP54, helical bundle DOE58_RS06110 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DOE58_RS06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06115 IPR000307 Ribosomal protein S16 DOE58_RS06115 IPR023803 Ribosomal protein S16 domain superfamily DOE58_RS06115 IPR020592 Ribosomal protein S16, conserved site DOE58_RS06120 IPR011961 16S rRNA processing protein RimM DOE58_RS06120 IPR027275 PRC-barrel domain DOE58_RS06120 IPR011033 PRC-barrel-like superfamily DOE58_RS06120 IPR002676 RimM, N-terminal DOE58_RS06120 IPR036976 RimM, N-terminal domain superfamily DOE58_RS06120 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS06125 IPR029028 Alpha/beta knot methyltransferases DOE58_RS06125 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DOE58_RS06125 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DOE58_RS06125 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DOE58_RS06125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS06130 IPR001857 Ribosomal protein L19 DOE58_RS06130 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS06130 IPR038657 Ribosomal protein L19 superfamily DOE58_RS06130 IPR018257 Ribosomal protein L19, conserved site DOE58_RS06135 IPR029787 Nucleotide cyclase DOE58_RS06135 IPR003660 HAMP domain DOE58_RS06135 IPR000160 GGDEF domain DOE58_RS06135 IPR033417 Periplasmic sensor domain CHASE8 DOE58_RS06140 IPR025293 YfiR/HmsC-like DOE58_RS06145 IPR013785 Aldolase-type TIM barrel DOE58_RS06145 IPR006219 DHAP synthase, class 1 DOE58_RS06145 IPR006218 DAHP synthetase I/KDSA DOE58_RS06150 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein DOE58_RS06150 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS06150 IPR003099 Prephenate dehydrogenase DOE58_RS06150 IPR002701 Chorismate mutase II, prokaryotic-type DOE58_RS06150 IPR036979 Chorismate mutase domain superfamily DOE58_RS06150 IPR011277 Chorismate mutase, T-protein DOE58_RS06150 IPR036263 Chorismate mutase type II superfamily DOE58_RS06150 IPR036291 NAD(P)-binding domain superfamily DOE58_RS06155 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS06155 IPR005511 Senescence marker protein-30 (SMP-30) DOE58_RS06155 IPR013658 SMP-30/Gluconolactonase/LRE-like region DOE58_RS06160 IPR002912 ACT domain DOE58_RS06160 IPR010952 Chorismate mutase, gammaproteobacteria DOE58_RS06160 IPR036979 Chorismate mutase domain superfamily DOE58_RS06160 IPR002701 Chorismate mutase II, prokaryotic-type DOE58_RS06160 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DOE58_RS06160 IPR018528 Prephenate dehydratase, conserved site DOE58_RS06160 IPR036263 Chorismate mutase type II superfamily DOE58_RS06160 IPR001086 Prephenate dehydratase DOE58_RS06170 IPR011931 Tyrosine recombinase XerC DOE58_RS06170 IPR010998 Integrase/recombinase, N-terminal DOE58_RS06170 IPR002104 Integrase, catalytic domain DOE58_RS06170 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS06170 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS06170 IPR023009 Tyrosine recombinase XerC/XerD DOE58_RS06170 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS06210 IPR006430 Phage portal protein PBSX family DOE58_RS06210 IPR030935 Phage portal protein PBSX family, Proteobacteria DOE58_RS06305 IPR011083 Phage tail collar domain DOE58_RS06305 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE58_RS06305 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE58_RS06305 IPR037053 Phage tail collar domain superfamily DOE58_RS06305 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal DOE58_RS06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06330 IPR024704 Structural maintenance of chromosomes protein DOE58_RS06330 IPR036277 SMCs flexible hinge superfamily DOE58_RS06330 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DOE58_RS06330 IPR003395 RecF/RecN/SMC, N-terminal DOE58_RS06330 IPR010935 SMCs flexible hinge DOE58_RS06340 IPR036567 Ribosome hibernation promotion factor-like DOE58_RS06340 IPR003489 Ribosome hibernation promoting factor/RaiA DOE58_RS06345 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS06345 IPR039565 Outer membrane lipoprotein BamD-like DOE58_RS06345 IPR017689 Outer membrane protein assembly factor BamD DOE58_RS06350 IPR006225 Pseudouridine synthase, RluC/RluD DOE58_RS06350 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE58_RS06350 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS06350 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS06350 IPR036986 RNA-binding S4 domain superfamily DOE58_RS06350 IPR002942 RNA-binding S4 domain DOE58_RS06355 IPR003730 Multi-copper polyphenol oxidoreductase DOE58_RS06355 IPR011324 Cytotoxic necrotizing factor-like, catalytic DOE58_RS06355 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DOE58_RS06360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06360 IPR041546 ClpA/ClpB, AAA lid domain DOE58_RS06360 IPR028299 ClpA/B, conserved site 2 DOE58_RS06360 IPR036628 Clp, N-terminal domain superfamily DOE58_RS06360 IPR004176 Clp, N-terminal DOE58_RS06360 IPR003593 AAA+ ATPase domain DOE58_RS06360 IPR003959 ATPase, AAA-type, core DOE58_RS06360 IPR017730 Chaperonin ClpB DOE58_RS06360 IPR019489 Clp ATPase, C-terminal DOE58_RS06360 IPR001270 ClpA/B family DOE58_RS06360 IPR018368 ClpA/B, conserved site 1 DOE58_RS06395 IPR020846 Major facilitator superfamily domain DOE58_RS06395 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS06395 IPR005828 Major facilitator, sugar transporter-like DOE58_RS06395 IPR005829 Sugar transporter, conserved site DOE58_RS06395 IPR036259 MFS transporter superfamily DOE58_RS06400 IPR017028 Uncharacterised conserved protein UCP034456 DOE58_RS06400 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein DOE58_RS06405 IPR001736 Phospholipase D/Transphosphatidylase DOE58_RS06405 IPR025202 Phospholipase D-like domain DOE58_RS06405 IPR016270 CDP-alcohol phosphatidyltransferase class-II family DOE58_RS06410 IPR003781 CoA-binding DOE58_RS06410 IPR000182 GNAT domain DOE58_RS06410 IPR036291 NAD(P)-binding domain superfamily DOE58_RS06410 IPR016102 Succinyl-CoA synthetase-like DOE58_RS06410 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DOE58_RS06410 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS06410 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS06410 IPR011761 ATP-grasp fold DOE58_RS06415 IPR039262 DTW domain-containing protein 2 DOE58_RS06415 IPR005636 DTW DOE58_RS06420 IPR013766 Thioredoxin domain DOE58_RS06420 IPR017937 Thioredoxin, conserved site DOE58_RS06420 IPR036249 Thioredoxin-like superfamily DOE58_RS06420 IPR005746 Thioredoxin DOE58_RS06425 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS06425 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted DOE58_RS06425 IPR029028 Alpha/beta knot methyltransferases DOE58_RS06425 IPR029064 50S ribosomal protein L30e-like DOE58_RS06425 IPR004441 RNA methyltransferase TrmH family DOE58_RS06425 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS06425 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOE58_RS06430 IPR005122 Uracil-DNA glycosylase-like DOE58_RS06430 IPR002043 Uracil-DNA glycosylase family 1 DOE58_RS06430 IPR036895 Uracil-DNA glycosylase-like domain superfamily DOE58_RS06430 IPR018085 Uracil-DNA glycosylase, active site DOE58_RS06435 IPR011140 Autonomous glycyl radical cofactor GrcA DOE58_RS06435 IPR001150 Glycine radical domain DOE58_RS06435 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS06440 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS06445 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06445 IPR000847 Transcription regulator HTH, LysR DOE58_RS06445 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS06445 IPR005119 LysR, substrate-binding DOE58_RS06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06450 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS06450 IPR028621 ATP-dependent RNA helicase SrmB DOE58_RS06450 IPR011545 DEAD/DEAH box helicase domain DOE58_RS06450 IPR001650 Helicase, C-terminal DOE58_RS06450 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE58_RS06450 IPR014014 RNA helicase, DEAD-box type, Q motif DOE58_RS06455 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS06455 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase DOE58_RS06455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS06455 IPR007848 Methyltransferase small domain DOE58_RS06460 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE58_RS06460 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE58_RS06460 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE58_RS06460 IPR005288 L-aspartate oxidase DOE58_RS06460 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS06460 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE58_RS06470 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE58_RS06470 IPR014284 RNA polymerase sigma-70 like domain DOE58_RS06470 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06470 IPR007627 RNA polymerase sigma-70 region 2 DOE58_RS06470 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DOE58_RS06470 IPR014286 RNA polymerase sigma-70 RpoE type DOE58_RS06470 IPR013325 RNA polymerase sigma factor, region 2 DOE58_RS06470 IPR039425 RNA polymerase sigma-70 like DOE58_RS06470 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DOE58_RS06475 IPR005572 Anti sigma-E protein RseA, N-terminal DOE58_RS06475 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily DOE58_RS06475 IPR026279 Sigma-E factor negative regulatory protein RseA DOE58_RS06475 IPR005573 Anti sigma-E protein RseA, C-terminal DOE58_RS06480 IPR033436 MucB/RseB, C-terminal DOE58_RS06480 IPR033434 MucB/RseB, N-terminal DOE58_RS06480 IPR005588 MucB/RseB DOE58_RS06480 IPR038484 MucB/RseB, C-terminal domain superfamily DOE58_RS06485 IPR026268 Protein RseC DOE58_RS06485 IPR007359 Positive regulator of sigma(E), RseC/MucC DOE58_RS06495 IPR000795 Transcription factor, GTP-binding domain DOE58_RS06495 IPR006297 Elongation factor 4 DOE58_RS06495 IPR005225 Small GTP-binding protein domain DOE58_RS06495 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS06495 IPR031157 Tr-type G domain, conserved site DOE58_RS06495 IPR038363 LepA, C-terminal domain superfamily DOE58_RS06495 IPR013842 GTP-binding protein LepA, C-terminal DOE58_RS06495 IPR035654 Elongation factor 4, domain IV DOE58_RS06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06495 IPR035647 EF-G domain III/V-like DOE58_RS06495 IPR000640 Elongation factor EFG, domain V-like DOE58_RS06500 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DOE58_RS06500 IPR000223 Peptidase S26A, signal peptidase I DOE58_RS06500 IPR019758 Peptidase S26A, signal peptidase I, conserved site DOE58_RS06500 IPR019756 Peptidase S26A, signal peptidase I, serine active site DOE58_RS06500 IPR019533 Peptidase S26 DOE58_RS06500 IPR036286 LexA/Signal peptidase-like superfamily DOE58_RS06510 IPR036389 Ribonuclease III, endonuclease domain superfamily DOE58_RS06510 IPR000999 Ribonuclease III domain DOE58_RS06510 IPR014720 Double-stranded RNA-binding domain DOE58_RS06510 IPR011907 Ribonuclease III DOE58_RS06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06515 IPR004044 K Homology domain, type 2 DOE58_RS06515 IPR006073 GTP binding domain DOE58_RS06515 IPR005662 GTP-binding protein Era DOE58_RS06515 IPR030388 Era-type guanine nucleotide-binding (G) domain DOE58_RS06515 IPR009019 K homology domain superfamily, prokaryotic type DOE58_RS06515 IPR005225 Small GTP-binding protein domain DOE58_RS06515 IPR015946 K homology domain-like, alpha/beta DOE58_RS06520 IPR037278 ARFGAP/RecO-like zinc finger DOE58_RS06520 IPR022572 DNA replication/recombination mediator RecO, N-terminal DOE58_RS06520 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS06520 IPR003717 Recombination protein O, RecO DOE58_RS06525 IPR036130 Pyridoxine 5'-phosphate synthase DOE58_RS06525 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DOE58_RS06525 IPR013785 Aldolase-type TIM barrel DOE58_RS06530 IPR004568 Phosphopantetheine-protein transferase domain DOE58_RS06530 IPR008278 4'-phosphopantetheinyl transferase domain DOE58_RS06530 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE58_RS06530 IPR002582 Holo-[acyl carrier protein] synthase DOE58_RS06535 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS06535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS06540 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS06540 IPR005119 LysR, substrate-binding DOE58_RS06540 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06540 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain DOE58_RS06540 IPR000847 Transcription regulator HTH, LysR DOE58_RS06545 IPR036259 MFS transporter superfamily DOE58_RS06545 IPR020846 Major facilitator superfamily domain DOE58_RS06545 IPR011701 Major facilitator superfamily DOE58_RS06550 IPR003710 Ketopantoate reductase ApbA/PanE DOE58_RS06550 IPR036291 NAD(P)-binding domain superfamily DOE58_RS06550 IPR013332 Ketopantoate reductase, N-terminal domain DOE58_RS06550 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS06550 IPR013752 Ketopantoate reductase, C-terminal domain DOE58_RS06550 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS06555 IPR009057 Homeobox-like domain superfamily DOE58_RS06555 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06555 IPR001347 Sugar isomerase (SIS) DOE58_RS06555 IPR035472 RpiR-like, SIS domain DOE58_RS06555 IPR000281 Helix-turn-helix protein RpiR DOE58_RS06560 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ DOE58_RS06560 IPR001347 Sugar isomerase (SIS) DOE58_RS06560 IPR005486 Glucokinase regulatory protein, conserved site DOE58_RS06560 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein DOE58_RS06565 IPR003352 Phosphotransferase system, EIIC DOE58_RS06565 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE58_RS06565 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE58_RS06565 IPR036878 Glucose permease domain IIB DOE58_RS06565 IPR001996 Phosphotransferase system, IIB component, type 1 DOE58_RS06570 IPR036412 HAD-like superfamily DOE58_RS06570 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB DOE58_RS06570 IPR023214 HAD superfamily DOE58_RS06575 IPR016193 Cytidine deaminase-like DOE58_RS06575 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE58_RS06575 IPR028883 tRNA-specific adenosine deaminase DOE58_RS06575 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE58_RS06580 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS06580 IPR000189 Prokaryotic transglycosylase, active site DOE58_RS06580 IPR008258 Transglycosylase SLT domain 1 DOE58_RS06580 IPR023703 Membrane-bound lytic murein transglycosylase F DOE58_RS06580 IPR023346 Lysozyme-like domain superfamily DOE58_RS06590 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal DOE58_RS06590 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily DOE58_RS06590 IPR017926 Glutamine amidotransferase DOE58_RS06590 IPR010073 Phosphoribosylformylglycinamidine synthase PurL DOE58_RS06590 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DOE58_RS06590 IPR010918 PurM-like, C-terminal domain DOE58_RS06590 IPR036676 PurM-like, C-terminal domain superfamily DOE58_RS06590 IPR036921 PurM-like, N-terminal domain superfamily DOE58_RS06590 IPR029062 Class I glutamine amidotransferase-like DOE58_RS06595 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS06595 IPR005467 Histidine kinase domain DOE58_RS06595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS06595 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS06595 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS06595 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS06600 IPR025262 Quorum-sensing regulator protein G DOE58_RS06605 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS06605 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS06605 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS06605 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS06605 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS06605 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06605 IPR009057 Homeobox-like domain superfamily DOE58_RS06605 IPR011006 CheY-like superfamily DOE58_RS06605 IPR003593 AAA+ ATPase domain DOE58_RS06610 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE58_RS06610 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE58_RS06610 IPR017918 Nitrogen regulatory protein PII, conserved site DOE58_RS06610 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOE58_RS06610 IPR002187 Nitrogen regulatory protein PII DOE58_RS06615 IPR005279 Dipeptide/tripeptide permease DOE58_RS06615 IPR000109 Proton-dependent oligopeptide transporter family DOE58_RS06615 IPR036259 MFS transporter superfamily DOE58_RS06615 IPR020846 Major facilitator superfamily domain DOE58_RS06615 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE58_RS06620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS06620 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE58_RS06620 IPR011193 Ornithine/lysine/arginine decarboxylase DOE58_RS06620 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE58_RS06620 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE58_RS06620 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS06620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS06620 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE58_RS06625 IPR002293 Amino acid/polyamine transporter I DOE58_RS06625 IPR004754 Amino acid antiporter DOE58_RS06630 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS06630 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06630 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS06630 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS06630 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS06630 IPR040970 CadC C-terminal domain 1 DOE58_RS06635 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS06635 IPR023950 Flavohemoprotein DOE58_RS06635 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS06635 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS06635 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE58_RS06635 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS06635 IPR012292 Globin/Protoglobin DOE58_RS06635 IPR009050 Globin-like superfamily DOE58_RS06635 IPR000971 Globin DOE58_RS06640 IPR039429 Serine hydroxymethyltransferase-like domain DOE58_RS06640 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DOE58_RS06640 IPR001085 Serine hydroxymethyltransferase DOE58_RS06640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS06640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS06640 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS06645 IPR026032 Probable 3-phenylpropionic acid transporter DOE58_RS06645 IPR024989 Major facilitator superfamily associated domain DOE58_RS06645 IPR036259 MFS transporter superfamily DOE58_RS06650 IPR011608 PRD domain DOE58_RS06650 IPR036634 PRD domain superfamily DOE58_RS06660 IPR011541 Nickel/cobalt transporter, high-affinity DOE58_RS06665 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DOE58_RS06665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS06665 IPR014261 Sulphite reductase, subunit C DOE58_RS06665 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DOE58_RS06665 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS06665 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DOE58_RS06665 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DOE58_RS06670 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS06670 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS06670 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain DOE58_RS06670 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit DOE58_RS06670 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS06670 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS06670 IPR014260 Sulphite reductase, subunit B DOE58_RS06675 IPR014259 Sulphite reductase, subunit A DOE58_RS06675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS06675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS06675 IPR009051 Alpha-helical ferredoxin DOE58_RS06685 IPR020583 Inositol monophosphatase, metal-binding site DOE58_RS06685 IPR000760 Inositol monophosphatase-like DOE58_RS06685 IPR020550 Inositol monophosphatase, conserved site DOE58_RS06685 IPR022337 Inositol monophosphatase, SuhB DOE58_RS06685 IPR033942 Inositol monophosphatase DOE58_RS06690 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS06690 IPR004384 RNA methyltransferase TrmJ/LasT DOE58_RS06690 IPR029028 Alpha/beta knot methyltransferases DOE58_RS06690 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS06695 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS06695 IPR000944 Transcription regulator Rrf2-type DOE58_RS06695 IPR030489 Transcription regulator Rrf2-type, conserved site DOE58_RS06695 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS06695 IPR010242 Transcription factor HTH, IscR DOE58_RS06700 IPR000192 Aminotransferase class V domain DOE58_RS06700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS06700 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE58_RS06700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS06700 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS06700 IPR016454 Cysteine desulfurase DOE58_RS06700 IPR010240 Cysteine desulfurase IscS DOE58_RS06705 IPR011339 ISC system FeS cluster assembly, IscU scaffold DOE58_RS06705 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DOE58_RS06710 IPR011302 Iron-binding protein IscA, proteobacteria DOE58_RS06710 IPR016092 FeS cluster insertion protein DOE58_RS06710 IPR000361 FeS cluster biogenesis DOE58_RS06710 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE58_RS06710 IPR035903 HesB-like domain superfamily DOE58_RS06715 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain DOE58_RS06715 IPR036869 Chaperone J-domain superfamily DOE58_RS06715 IPR036386 HscB, C-terminal domain superfamily DOE58_RS06715 IPR001623 DnaJ domain DOE58_RS06715 IPR004640 Co-chaperone Hsc20 DOE58_RS06720 IPR018181 Heat shock protein 70, conserved site DOE58_RS06720 IPR042039 HscA chaperone, nucleotide-binding domain DOE58_RS06720 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DOE58_RS06720 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DOE58_RS06720 IPR013126 Heat shock protein 70 family DOE58_RS06720 IPR010236 ISC system FeS cluster assembly, HscA chaperone DOE58_RS06725 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS06725 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria DOE58_RS06725 IPR018298 Adrenodoxin, iron-sulphur binding site DOE58_RS06725 IPR001055 Adrenodoxin DOE58_RS06725 IPR012675 Beta-grasp domain superfamily DOE58_RS06725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS06730 IPR036762 IscX-like superfamily DOE58_RS06730 IPR007479 ISC system FeS cluster assembly, IscX DOE58_RS06735 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOE58_RS06735 IPR008330 Peptidase M17, peptidase B DOE58_RS06735 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOE58_RS06735 IPR001346 Interferon regulatory factor DNA-binding domain DOE58_RS06745 IPR027945 SseB protein, C-terminal DOE58_RS06745 IPR009839 SseB protein N-terminal domain DOE58_RS06755 IPR001763 Rhodanese-like domain DOE58_RS06755 IPR036873 Rhodanese-like domain superfamily DOE58_RS06755 IPR001307 Thiosulphate sulfurtransferase, conserved site DOE58_RS06760 IPR011625 Alpha-2-macroglobulin, bait region domain DOE58_RS06760 IPR040639 Alpha-2-macroglobulin, MG1 domain DOE58_RS06760 IPR011626 Alpha-macroglobulin-like, TED domain DOE58_RS06760 IPR026284 Alpha-2-macroglobulin, bacteria DOE58_RS06760 IPR021868 Alpha-2-macroglobulin MG3 domain DOE58_RS06760 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain DOE58_RS06760 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain DOE58_RS06760 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain DOE58_RS06760 IPR001599 Alpha-2-macroglobulin DOE58_RS06760 IPR002890 Macroglobulin domain DOE58_RS06760 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOE58_RS06765 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS06765 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS06765 IPR036950 Penicillin binding protein transglycosylase domain DOE58_RS06765 IPR009647 Penicillin-binding, C-terminal DOE58_RS06765 IPR011815 Penicillin-binding protein 1C DOE58_RS06765 IPR001264 Glycosyl transferase, family 51 DOE58_RS06765 IPR023346 Lysozyme-like domain superfamily DOE58_RS06770 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS06770 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS06770 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS06770 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS06770 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS06770 IPR006656 Molybdopterin oxidoreductase DOE58_RS06770 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS06770 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS06770 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE58_RS06775 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS06775 IPR014297 Dimethylsulphoxide reductase, chain B DOE58_RS06775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS06790 IPR001564 Nucleoside diphosphate kinase DOE58_RS06790 IPR036850 Nucleoside diphosphate kinase-like domain superfamily DOE58_RS06790 IPR034907 Nucleoside diphosphate kinase-like domain DOE58_RS06790 IPR023005 Nucleoside diphosphate kinase, active site DOE58_RS06795 IPR013785 Aldolase-type TIM barrel DOE58_RS06795 IPR027492 Dual-specificity RNA methyltransferase RlmN DOE58_RS06795 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DOE58_RS06795 IPR007197 Radical SAM DOE58_RS06795 IPR040072 Methyltransferase (Class A) DOE58_RS06805 IPR025194 Domain of unknown function DUF4115 DOE58_RS06805 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS06805 IPR023690 Cytoskeleton protein RodZ DOE58_RS06805 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS06810 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DOE58_RS06810 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DOE58_RS06810 IPR011005 Dihydropteroate synthase-like DOE58_RS06815 IPR033656 Histidyl-anticodon-binding DOE58_RS06815 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DOE58_RS06815 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DOE58_RS06815 IPR015807 Histidine-tRNA ligase DOE58_RS06815 IPR036621 Anticodon-binding domain superfamily DOE58_RS06815 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS06815 IPR004154 Anticodon-binding DOE58_RS06820 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS06820 IPR026039 Uncharacterised protein family UPF0070 DOE58_RS06820 IPR018704 Tetratricopeptide repeat-like domain DOE58_RS06825 IPR017687 Outer membrane protein assembly factor BamB DOE58_RS06825 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOE58_RS06825 IPR002372 Pyrrolo-quinoline quinone repeat DOE58_RS06825 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOE58_RS06825 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE58_RS06830 IPR005225 Small GTP-binding protein domain DOE58_RS06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06830 IPR015946 K homology domain-like, alpha/beta DOE58_RS06830 IPR032859 GTPase Der, C-terminal KH-domain-like DOE58_RS06830 IPR006073 GTP binding domain DOE58_RS06830 IPR016484 GTP-binding protein EngA DOE58_RS06830 IPR031166 EngA-type guanine nucleotide-binding (G) domain DOE58_RS06835 IPR010807 Protein of unknown function DUF1407 DOE58_RS06835 IPR029037 YfgJ-like DOE58_RS06840 IPR018392 LysM domain DOE58_RS06840 IPR008964 Invasin/intimin cell-adhesion fragments DOE58_RS06840 IPR003344 Big-1 (bacterial Ig-like domain 1) domain DOE58_RS06840 IPR003343 Bacterial Ig-like, group 2 DOE58_RS06840 IPR016186 C-type lectin-like/link domain superfamily DOE58_RS06840 IPR016187 C-type lectin fold DOE58_RS06840 IPR024519 Inverse autotransporter, beta-domain DOE58_RS06840 IPR038177 Inverse autotransporter, beta-domain superfamily DOE58_RS06840 IPR003535 Intimin/invasin bacterial adhesion mediator protein DOE58_RS06840 IPR013117 Intimin, C-terminal DOE58_RS06840 IPR013783 Immunoglobulin-like fold DOE58_RS06865 IPR011050 Pectin lyase fold/virulence factor DOE58_RS06865 IPR006315 Outer membrane autotransporter barrel DOE58_RS06865 IPR036709 Autotransporter beta-domain superfamily DOE58_RS06865 IPR005546 Autotransporter beta-domain DOE58_RS06870 IPR025824 OB-fold nucleic acid binding domain DOE58_RS06870 IPR020579 Exonuclease VII, large subunit, C-terminal DOE58_RS06870 IPR003753 Exonuclease VII, large subunit DOE58_RS06875 IPR001093 IMP dehydrogenase/GMP reductase DOE58_RS06875 IPR000644 CBS domain DOE58_RS06875 IPR005990 Inosine-5'-monophosphate dehydrogenase DOE58_RS06875 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOE58_RS06875 IPR013785 Aldolase-type TIM barrel DOE58_RS06880 IPR004739 GMP synthase, glutamine amidotransferase DOE58_RS06880 IPR022955 GMP synthase DOE58_RS06880 IPR001674 GMP synthase, C-terminal DOE58_RS06880 IPR017926 Glutamine amidotransferase DOE58_RS06880 IPR025777 GMP synthetase ATP pyrophosphatase domain DOE58_RS06880 IPR022310 NAD/GMP synthase DOE58_RS06880 IPR029062 Class I glutamine amidotransferase-like DOE58_RS06880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS06900 IPR022576 Protein of unknown function DUF2633 DOE58_RS06910 IPR007895 MASE1 DOE58_RS06910 IPR000160 GGDEF domain DOE58_RS06910 IPR001633 EAL domain DOE58_RS06910 IPR035919 EAL domain superfamily DOE58_RS06915 IPR030673 Pyrophosphatase, GppA/Ppx-type DOE58_RS06915 IPR022371 Exopolyphosphatase DOE58_RS06915 IPR003695 Ppx/GppA phosphatase DOE58_RS06920 IPR024953 Polyphosphate kinase middle domain DOE58_RS06920 IPR001736 Phospholipase D/Transphosphatidylase DOE58_RS06920 IPR003414 Polyphosphate kinase DOE58_RS06920 IPR036832 Polyphosphate kinase N-terminal domain superfamily DOE58_RS06920 IPR036830 Polyphosphate kinase middle domain superfamily DOE58_RS06920 IPR041108 Polyphosphate kinase, C-terminal domain 1 DOE58_RS06920 IPR025200 Polyphosphate kinase C-terminal domain 2 DOE58_RS06920 IPR025198 Polyphosphate kinase N-terminal domain DOE58_RS06925 IPR036477 Formyl transferase, N-terminal domain superfamily DOE58_RS06925 IPR004607 Phosphoribosylglycinamide formyltransferase DOE58_RS06925 IPR002376 Formyl transferase, N-terminal DOE58_RS06925 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DOE58_RS06930 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DOE58_RS06930 IPR036921 PurM-like, N-terminal domain superfamily DOE58_RS06930 IPR016188 PurM-like, N-terminal domain DOE58_RS06930 IPR036676 PurM-like, C-terminal domain superfamily DOE58_RS06930 IPR010918 PurM-like, C-terminal domain DOE58_RS06935 IPR000836 Phosphoribosyltransferase domain DOE58_RS06935 IPR029057 Phosphoribosyltransferase-like DOE58_RS06935 IPR005765 Uracil phosphoribosyl transferase DOE58_RS06935 IPR034332 Uracil phosphoribosyltransferase, bacterial-type DOE58_RS06940 IPR006042 Xanthine/uracil permease DOE58_RS06940 IPR006043 Xanthine/uracil/vitamin C permease DOE58_RS06940 IPR029935 Uracil permease DOE58_RS06945 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae DOE58_RS06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS06945 IPR020591 Chromosomal replication control, initiator DnaA-like DOE58_RS06945 IPR017788 DnaA regulatory inactivator Hda DOE58_RS06945 IPR013317 Chromosomal replication initiator protein DnaA DOE58_RS06950 IPR036249 Thioredoxin-like superfamily DOE58_RS06950 IPR006660 Arsenate reductase-like DOE58_RS06950 IPR006659 Arsenate reductase DOE58_RS06955 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS06955 IPR001915 Peptidase M48 DOE58_RS06955 IPR030873 Beta-barrel assembly-enhancing protease DOE58_RS06960 IPR002549 Transmembrane protein TqsA-like DOE58_RS06965 IPR041522 CdaR, GGDEF-like domain DOE58_RS06965 IPR008599 Putative sugar diacid recognition DOE58_RS06965 IPR025736 PucR C-terminal helix-turn-helix domain DOE58_RS06965 IPR042070 PucR C-terminal helix-turn-helix domain superfamily DOE58_RS06970 IPR003474 Gluconate transporter DOE58_RS06975 IPR018193 Glycerate kinase, flavodoxin-like fold DOE58_RS06975 IPR004381 Glycerate kinase DOE58_RS06975 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE58_RS06975 IPR036129 Glycerate kinase superfamily DOE58_RS06980 IPR013766 Thioredoxin domain DOE58_RS06980 IPR036249 Thioredoxin-like superfamily DOE58_RS06980 IPR024706 Peroxiredoxin, AhpC-type DOE58_RS06980 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE58_RS06985 IPR002912 ACT domain DOE58_RS06985 IPR016867 Glycine cleavage system transcriptional repressor DOE58_RS06990 IPR013785 Aldolase-type TIM barrel DOE58_RS06990 IPR020624 Schiff base-forming aldolase, conserved site DOE58_RS06990 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DOE58_RS06990 IPR002220 DapA-like DOE58_RS06990 IPR020625 Schiff base-forming aldolase, active site DOE58_RS06995 IPR042268 Outer membrane protein assembly factor BamC, C-terminal DOE58_RS06995 IPR010653 NlpB/DapX lipoprotein DOE58_RS06995 IPR014524 Outer membrane protein assembly factor BamC DOE58_RS07000 IPR018236 SAICAR synthetase, conserved site DOE58_RS07000 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase DOE58_RS07000 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DOE58_RS07000 IPR028923 SAICAR synthetase/ADE2, N-terminal DOE58_RS07005 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative DOE58_RS07010 IPR038321 TmcA, C-terminal domain superfamily DOE58_RS07010 IPR000182 GNAT domain DOE58_RS07010 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS07010 IPR032672 TmcA/NAT10/Kre33 DOE58_RS07010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07010 IPR007807 Helicase domain DOE58_RS07010 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain DOE58_RS07010 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA DOE58_RS07010 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal DOE58_RS07015 IPR020910 Uncharacterised protein family UPF0370 DOE58_RS07020 IPR011650 Peptidase M20, dimerisation domain DOE58_RS07020 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE58_RS07020 IPR002933 Peptidase M20 DOE58_RS07020 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DOE58_RS07020 IPR036264 Bacterial exopeptidase dimerisation domain DOE58_RS07025 IPR006504 Transcriptional regulator Spx/MgsR DOE58_RS07025 IPR006660 Arsenate reductase-like DOE58_RS07025 IPR036249 Thioredoxin-like superfamily DOE58_RS07035 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS07035 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE58_RS07035 IPR001036 Acriflavin resistance protein DOE58_RS07040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS07040 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing DOE58_RS07040 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE58_RS07040 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS07040 IPR029095 NarX-like, N-terminal DOE58_RS07040 IPR005467 Histidine kinase domain DOE58_RS07040 IPR003660 HAMP domain DOE58_RS07040 IPR042295 NarX-like, N-terminal domain superfamily DOE58_RS07050 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS07050 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS07050 IPR009051 Alpha-helical ferredoxin DOE58_RS07050 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DOE58_RS07050 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS07050 IPR023753 FAD/NAD(P)-binding domain DOE58_RS07050 IPR028261 Dihydroprymidine dehydrogenase domain II DOE58_RS07060 IPR022849 Peptidase S12, YfeW/YbbE-like DOE58_RS07060 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS07060 IPR001466 Beta-lactamase-related DOE58_RS07065 IPR004385 Nucleoside diphosphate pyrophosphatase DOE58_RS07065 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS07065 IPR000086 NUDIX hydrolase domain DOE58_RS07070 IPR009560 Protein of unknown function DUF1176 DOE58_RS07080 IPR033248 Transketolase, C-terminal domain DOE58_RS07080 IPR033247 Transketolase family DOE58_RS07080 IPR005474 Transketolase, N-terminal DOE58_RS07080 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS07080 IPR029061 Thiamin diphosphate-binding fold DOE58_RS07080 IPR020826 Transketolase binding site DOE58_RS07080 IPR005478 Transketolase, bacterial-like DOE58_RS07080 IPR005475 Transketolase-like, pyrimidine-binding domain DOE58_RS07085 IPR018225 Transaldolase, active site DOE58_RS07085 IPR013785 Aldolase-type TIM barrel DOE58_RS07085 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE58_RS07085 IPR004730 Transaldolase type 1 DOE58_RS07095 IPR012302 Malic enzyme, NAD-binding DOE58_RS07095 IPR015884 Malic enzyme, conserved site DOE58_RS07095 IPR012301 Malic enzyme, N-terminal domain DOE58_RS07095 IPR037062 Malic enzyme, N-terminal domain superfamily DOE58_RS07095 IPR002505 Phosphate acetyl/butaryl transferase DOE58_RS07095 IPR012188 NAD(P)-dependent malic enzyme DOE58_RS07095 IPR042112 Phosphate acetyltransferase, domain 2 DOE58_RS07095 IPR042113 Phosphate acetyltransferase, domain 1 DOE58_RS07095 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07100 IPR009307 Ethanolamine utilisation EutS DOE58_RS07100 IPR037233 CcmK-like superfamily DOE58_RS07100 IPR000249 Microcompartment protein, bacteria DOE58_RS07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07105 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV DOE58_RS07110 IPR011051 RmlC-like cupin domain superfamily DOE58_RS07110 IPR010424 Ethanolamine utilisation EutQ DOE58_RS07110 IPR014710 RmlC-like jelly roll fold DOE58_RS07115 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type DOE58_RS07115 IPR016030 Cobalamin adenosyltransferase-like DOE58_RS07115 IPR036451 Cobalamin adenosyltransferase-like superfamily DOE58_RS07120 IPR042112 Phosphate acetyltransferase, domain 2 DOE58_RS07120 IPR042113 Phosphate acetyltransferase, domain 1 DOE58_RS07120 IPR002505 Phosphate acetyl/butaryl transferase DOE58_RS07120 IPR004614 Phosphate acetyltransferase DOE58_RS07120 IPR012147 Phosphate acetyl/butyryltransferase DOE58_RS07125 IPR000249 Microcompartment protein, bacteria DOE58_RS07125 IPR020808 Bacterial microcompartments protein, conserved site DOE58_RS07125 IPR037233 CcmK-like superfamily DOE58_RS07130 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml DOE58_RS07130 IPR036677 EutN/Ccml superfamily DOE58_RS07135 IPR015590 Aldehyde dehydrogenase domain DOE58_RS07135 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS07135 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS07135 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS07135 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related DOE58_RS07140 IPR013366 Ethanolamine utilisation EutJ DOE58_RS07145 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS07145 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS07145 IPR039697 Iron-type alcohol dehydrogenase-like DOE58_RS07150 IPR007441 Ethanolamine utilisation protein EutH DOE58_RS07155 IPR009377 Ethanolamine utilisation EutA DOE58_RS07160 IPR010628 Ethanolamine ammonia lyase large subunit DOE58_RS07160 IPR013785 Aldolase-type TIM barrel DOE58_RS07165 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal DOE58_RS07165 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal DOE58_RS07165 IPR009246 Ethanolamine ammonia-lyase light chain DOE58_RS07170 IPR000249 Microcompartment protein, bacteria DOE58_RS07170 IPR009193 Polyhedral organelle shell protein, EutL/PduB type DOE58_RS07170 IPR037233 CcmK-like superfamily DOE58_RS07170 IPR030983 Ethanolamine utilization protein EutL DOE58_RS07175 IPR037233 CcmK-like superfamily DOE58_RS07175 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS07175 IPR000249 Microcompartment protein, bacteria DOE58_RS07175 IPR020808 Bacterial microcompartments protein, conserved site DOE58_RS07175 IPR032298 Ethanolamine utilization protein EutK, C-terminal DOE58_RS07180 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS07180 IPR018062 HTH domain AraC-type, conserved site DOE58_RS07180 IPR009057 Homeobox-like domain superfamily DOE58_RS07185 IPR001260 Coproporphyrinogen III oxidase, aerobic DOE58_RS07185 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily DOE58_RS07185 IPR018375 Coproporphyrinogen III oxidase, conserved site DOE58_RS07190 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE58_RS07195 IPR017255 Acetyltransferase, GNAT, predicted DOE58_RS07195 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS07195 IPR000182 GNAT domain DOE58_RS07195 IPR023072 Acetyltransferase, YpeA DOE58_RS07200 IPR021318 Protein of unknown function DUF2919 DOE58_RS07205 IPR010938 Protein of unknown function DUF1131 DOE58_RS07205 IPR038714 YfeY-like superfamily DOE58_RS07210 IPR011008 Dimeric alpha-beta barrel DOE58_RS07210 IPR006314 Dyp-type peroxidase DOE58_RS07215 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS07215 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07220 IPR005669 Thiosulphate/Sulfate-binding protein DOE58_RS07220 IPR034408 Sulphate/thiosulphate-binding site DOE58_RS07220 IPR000957 Sulphate/thiosulphate-binding, conserved site DOE58_RS07225 IPR011865 Sulphate ABC transporter, permease protein CysT DOE58_RS07225 IPR035906 MetI-like superfamily DOE58_RS07225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS07225 IPR005667 Sulphate ABC transporter permease protein 2 DOE58_RS07230 IPR011866 Sulphate ABC transporter, permease protein CysW DOE58_RS07230 IPR005667 Sulphate ABC transporter permease protein 2 DOE58_RS07230 IPR035906 MetI-like superfamily DOE58_RS07230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS07235 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DOE58_RS07235 IPR005666 Sulphate transport system permease protein 1 DOE58_RS07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07235 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS07235 IPR017871 ABC transporter, conserved site DOE58_RS07235 IPR003593 AAA+ ATPase domain DOE58_RS07235 IPR003439 ABC transporter-like DOE58_RS07240 IPR005856 Cysteine synthase DOE58_RS07240 IPR005858 Cysteine synthase CysM DOE58_RS07240 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DOE58_RS07240 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS07240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS07245 IPR035242 Protein of unknown function DUF5329 DOE58_RS07250 IPR029062 Class I glutamine amidotransferase-like DOE58_RS07250 IPR017926 Glutamine amidotransferase DOE58_RS07255 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS07255 IPR000524 Transcription regulator HTH, GntR DOE58_RS07255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS07255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS07255 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS07255 IPR004839 Aminotransferase, class I/classII DOE58_RS07255 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS07260 IPR029056 Ribokinase-like DOE58_RS07260 IPR004625 Pyridoxine kinase DOE58_RS07260 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE58_RS07260 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase DOE58_RS07270 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 DOE58_RS07270 IPR011055 Duplicated hybrid motif DOE58_RS07275 IPR018274 PEP-utilising enzyme, active site DOE58_RS07275 IPR023151 PEP-utilising enzyme, conserved site DOE58_RS07275 IPR000121 PEP-utilising enzyme, C-terminal DOE58_RS07275 IPR024692 Phosphotransferase system, enzyme I DOE58_RS07275 IPR008279 PEP-utilising enzyme, mobile domain DOE58_RS07275 IPR036637 Phosphohistidine domain superfamily DOE58_RS07275 IPR006318 Phosphotransferase system, enzyme I-like DOE58_RS07275 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE58_RS07275 IPR036618 PtsI, HPr-binding domain superfamily DOE58_RS07275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS07275 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS07280 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE58_RS07280 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE58_RS07280 IPR035895 HPr-like superfamily DOE58_RS07280 IPR000032 Phosphocarrier protein HPr-like DOE58_RS07285 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DOE58_RS07285 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS07285 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS07285 IPR005859 Cysteine synthase CysK DOE58_RS07285 IPR005856 Cysteine synthase DOE58_RS07290 IPR022985 Sulfate transporter CysZ DOE58_RS07295 IPR011919 Cell division protein ZipA DOE58_RS07295 IPR007449 ZipA, C-terminal FtsZ-binding domain DOE58_RS07295 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily DOE58_RS07300 IPR013839 NAD-dependent DNA ligase, adenylation DOE58_RS07300 IPR013840 NAD-dependent DNA ligase, N-terminal DOE58_RS07300 IPR041663 DisA/LigA, helix-hairpin-helix motif DOE58_RS07300 IPR001679 NAD-dependent DNA ligase DOE58_RS07300 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type DOE58_RS07300 IPR033136 NAD-dependent DNA ligase, conserved site DOE58_RS07300 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE58_RS07300 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS07300 IPR018239 NAD-dependent DNA ligase, active site DOE58_RS07300 IPR010994 RuvA domain 2-like DOE58_RS07300 IPR036420 BRCT domain superfamily DOE58_RS07300 IPR001357 BRCT domain DOE58_RS07300 IPR004150 NAD-dependent DNA ligase, OB-fold DOE58_RS07305 IPR024530 Putative quorum-sensing-regulated virulence factor DOE58_RS07310 IPR038770 Sodium/solute symporter superfamily DOE58_RS07310 IPR016833 Putative sodium bile acid cotransporter DOE58_RS07315 IPR005119 LysR, substrate-binding DOE58_RS07315 IPR000847 Transcription regulator HTH, LysR DOE58_RS07315 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS07315 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS07320 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like DOE58_RS07320 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily DOE58_RS07325 IPR010943 Xanthosine phosphorylase DOE58_RS07325 IPR018099 Purine phosphorylase, family 2, conserved site DOE58_RS07325 IPR011268 Purine nucleoside phosphorylase DOE58_RS07325 IPR000845 Nucleoside phosphorylase domain DOE58_RS07325 IPR035994 Nucleoside phosphorylase superfamily DOE58_RS07330 IPR020846 Major facilitator superfamily domain DOE58_RS07330 IPR036259 MFS transporter superfamily DOE58_RS07330 IPR004740 Nucleoside:H+ symporter DOE58_RS07340 IPR005119 LysR, substrate-binding DOE58_RS07340 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS07340 IPR000847 Transcription regulator HTH, LysR DOE58_RS07340 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain DOE58_RS07340 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS07365 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DOE58_RS07365 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE58_RS07365 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DOE58_RS07365 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS07365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS07365 IPR033910 Glutamyl-tRNA synthetase DOE58_RS07365 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE58_RS07365 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DOE58_RS07370 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS07370 IPR009061 Putative DNA-binding domain superfamily DOE58_RS07370 IPR010749 Protein of unknown function DUF1323 DOE58_RS07370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS07375 IPR009061 Putative DNA-binding domain superfamily DOE58_RS07375 IPR010749 Protein of unknown function DUF1323 DOE58_RS07395 IPR007895 MASE1 DOE58_RS07395 IPR001633 EAL domain DOE58_RS07395 IPR035919 EAL domain superfamily DOE58_RS07395 IPR000160 GGDEF domain DOE58_RS07395 IPR029787 Nucleotide cyclase DOE58_RS07400 IPR011657 Concentrative nucleoside transporter C-terminal domain DOE58_RS07400 IPR008276 Concentrative nucleoside transporter DOE58_RS07400 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial DOE58_RS07400 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE58_RS07400 IPR002668 Concentrative nucleoside transporter N-terminal domain DOE58_RS07405 IPR001046 NRAMP family DOE58_RS07410 IPR019638 Protein of unknown function DUF2502 DOE58_RS07415 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS07415 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS07420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS07420 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE58_RS07420 IPR029061 Thiamin diphosphate-binding fold DOE58_RS07420 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae DOE58_RS07420 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS07420 IPR000399 TPP-binding enzyme, conserved site DOE58_RS07420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS07420 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme DOE58_RS07425 IPR014743 Chloride channel, core DOE58_RS07425 IPR022969 Chloride channel YfeO DOE58_RS07425 IPR001807 Chloride channel, voltage gated DOE58_RS07430 IPR003836 Glucokinase DOE58_RS07440 IPR004839 Aminotransferase, class I/classII DOE58_RS07440 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS07440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS07440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS07450 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP DOE58_RS07450 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOE58_RS07450 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE58_RS07455 IPR024470 Protein of unknown function DUF2545 DOE58_RS07465 IPR000849 Sugar phosphate transporter DOE58_RS07465 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE58_RS07465 IPR036259 MFS transporter superfamily DOE58_RS07465 IPR020846 Major facilitator superfamily domain DOE58_RS07465 IPR011701 Major facilitator superfamily DOE58_RS07465 IPR005267 Glycerol-3-phosphate transporter DOE58_RS07480 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS07480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS07480 IPR005467 Histidine kinase domain DOE58_RS07480 IPR003660 HAMP domain DOE58_RS07480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS07480 IPR017116 Signal transduction histidine kinase, PgtB DOE58_RS07480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS07485 IPR011006 CheY-like superfamily DOE58_RS07485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07485 IPR009057 Homeobox-like domain superfamily DOE58_RS07485 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS07485 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS07485 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS07485 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS07490 IPR000036 Peptidase A26, omptin DOE58_RS07490 IPR020080 Outer membrane adhesin/peptidase omptin DOE58_RS07490 IPR020079 Peptidase A26, omptin, conserved site DOE58_RS07500 IPR000292 Formate/nitrite transporter DOE58_RS07500 IPR023271 Aquaporin-like DOE58_RS07505 IPR007428 MlaA lipoprotein DOE58_RS07510 IPR042117 OMPP1/FadL/TodX superfamily DOE58_RS07510 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DOE58_RS07515 IPR035571 UPF0234-like, C-terminal DOE58_RS07515 IPR005272 Conserved hypothetical protein CHP00743 DOE58_RS07520 IPR020617 Thiolase, C-terminal DOE58_RS07520 IPR020610 Thiolase, active site DOE58_RS07520 IPR020616 Thiolase, N-terminal DOE58_RS07520 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE58_RS07520 IPR020613 Thiolase, conserved site DOE58_RS07520 IPR012806 Acetyl-CoA C-acyltransferase FadI DOE58_RS07520 IPR002155 Thiolase DOE58_RS07520 IPR016039 Thiolase-like DOE58_RS07525 IPR001753 Enoyl-CoA hydratase/isomerase DOE58_RS07525 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS07525 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOE58_RS07525 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07525 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOE58_RS07525 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DOE58_RS07525 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS07525 IPR012802 Fatty oxidation complex, alpha subunit FadJ DOE58_RS07530 IPR004449 Phosphohistidine phosphatase SixA DOE58_RS07530 IPR029033 Histidine phosphatase superfamily DOE58_RS07530 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS07535 IPR036063 Smr domain superfamily DOE58_RS07535 IPR002625 Smr domain DOE58_RS07535 IPR022990 Uncharacterised protein family UPF0115 DOE58_RS07540 IPR007848 Methyltransferase small domain DOE58_RS07540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS07540 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase DOE58_RS07540 IPR004556 Methyltransferase HemK-like DOE58_RS07540 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS07545 IPR000453 Chorismate synthase DOE58_RS07545 IPR035904 Chorismate synthase AroC superfamily DOE58_RS07545 IPR020541 Chorismate synthase, conserved site DOE58_RS07550 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE58_RS07550 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase DOE58_RS07555 IPR002781 Transmembrane protein TauE-like DOE58_RS07560 IPR007411 Elongation factor P hydroxylase DOE58_RS07565 IPR014987 Uncharacterised protein family YfcL DOE58_RS07570 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS07570 IPR006076 FAD dependent oxidoreductase DOE58_RS07570 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DOE58_RS07570 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DOE58_RS07570 IPR008471 MnmC-like methyltransferase DOE58_RS07575 IPR000794 Beta-ketoacyl synthase DOE58_RS07575 IPR018201 Beta-ketoacyl synthase, active site DOE58_RS07575 IPR014031 Beta-ketoacyl synthase, C-terminal DOE58_RS07575 IPR014030 Beta-ketoacyl synthase, N-terminal DOE58_RS07575 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOE58_RS07575 IPR016039 Thiolase-like DOE58_RS07580 IPR003675 CAAX prenyl protease 2 DOE58_RS07595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS07595 IPR038722 Ner, winged helix-turn-helix DNA-binding domain DOE58_RS07605 IPR020846 Major facilitator superfamily domain DOE58_RS07605 IPR036259 MFS transporter superfamily DOE58_RS07605 IPR037541 Uncharacterized MFS-type transporter YfcJ DOE58_RS07605 IPR011701 Major facilitator superfamily DOE58_RS07610 IPR023597 Flagellar regulator Flk DOE58_RS07615 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE58_RS07615 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE58_RS07615 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07615 IPR020921 Erythronate-4-phosphate dehydrogenase DOE58_RS07615 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE58_RS07615 IPR038251 PdxB, dimerisation domain superfamily DOE58_RS07615 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain DOE58_RS07615 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE58_RS07620 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE58_RS07620 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07620 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE58_RS07625 IPR001406 Pseudouridine synthase I, TruA DOE58_RS07625 IPR020095 Pseudouridine synthase I, TruA, C-terminal DOE58_RS07625 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS07625 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DOE58_RS07630 IPR032816 SNARE associated Golgi protein DOE58_RS07630 IPR032818 DedA family DOE58_RS07635 IPR041010 Acetyl-coA carboxylase zinc finger domain DOE58_RS07635 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DOE58_RS07635 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS07635 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit DOE58_RS07635 IPR034733 Acetyl-CoA carboxylase DOE58_RS07640 IPR001645 Folylpolyglutamate synthetase DOE58_RS07640 IPR004101 Mur ligase, C-terminal DOE58_RS07640 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS07640 IPR018109 Folylpolyglutamate synthetase, conserved site DOE58_RS07640 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS07640 IPR013221 Mur ligase, central DOE58_RS07645 IPR032898 Cell division protein DedD DOE58_RS07645 IPR007730 Sporulation-like domain DOE58_RS07645 IPR036680 Sporulation-like domain superfamily DOE58_RS07650 IPR003825 Colicin V production, CvpA DOE58_RS07655 IPR017932 Glutamine amidotransferase type 2 domain DOE58_RS07655 IPR000836 Phosphoribosyltransferase domain DOE58_RS07655 IPR029057 Phosphoribosyltransferase-like DOE58_RS07655 IPR005854 Amidophosphoribosyltransferase DOE58_RS07655 IPR035584 Amidophosphoribosyltransferase, N-terminal DOE58_RS07655 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS07660 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS07660 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS07660 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS07660 IPR035965 PAS domain superfamily DOE58_RS07660 IPR000014 PAS domain DOE58_RS07660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07660 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS07660 IPR009057 Homeobox-like domain superfamily DOE58_RS07660 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS07660 IPR003593 AAA+ ATPase domain DOE58_RS07665 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DOE58_RS07665 IPR000183 Ornithine/DAP/Arg decarboxylase DOE58_RS07665 IPR029066 PLP-binding barrel DOE58_RS07665 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE58_RS07665 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DOE58_RS07670 IPR002293 Amino acid/polyamine transporter I DOE58_RS07675 IPR001608 Alanine racemase, N-terminal DOE58_RS07675 IPR029066 PLP-binding barrel DOE58_RS07680 IPR004840 Amino acid permease, conserved site DOE58_RS07680 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS07685 IPR036551 Flavin prenyltransferase-like DOE58_RS07685 IPR004507 Flavin prenyltransferase UbiX-like DOE58_RS07685 IPR003382 Flavoprotein DOE58_RS07695 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS07695 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS07695 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE58_RS07700 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE58_RS07700 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS07700 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS07705 IPR035906 MetI-like superfamily DOE58_RS07705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS07705 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS07705 IPR030199 Histidine transport system permease protein HisQ DOE58_RS07710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS07710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS07710 IPR035906 MetI-like superfamily DOE58_RS07715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07715 IPR017871 ABC transporter, conserved site DOE58_RS07715 IPR003439 ABC transporter-like DOE58_RS07715 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS07715 IPR003593 AAA+ ATPase domain DOE58_RS07720 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS07720 IPR013549 Domain of unknown function DUF1731 DOE58_RS07720 IPR010099 Epimerase family protein SDR39U1 DOE58_RS07720 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07725 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS07725 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS07725 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS07725 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS07725 IPR036249 Thioredoxin-like superfamily DOE58_RS07730 IPR036249 Thioredoxin-like superfamily DOE58_RS07730 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS07730 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal DOE58_RS07730 IPR040079 Glutathione Transferase family DOE58_RS07730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS07730 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS07735 IPR041802 YfcE-like, metallophosphatase domain DOE58_RS07735 IPR000979 Phosphodiesterase MJ0936/Vps29 DOE58_RS07735 IPR029052 Metallo-dependent phosphatase-like DOE58_RS07735 IPR020935 Phosphodiesterase YfcE, conserved site DOE58_RS07735 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type DOE58_RS07740 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS07740 IPR000086 NUDIX hydrolase domain DOE58_RS07740 IPR024195 NUDIX hydrolase, YfcD, predicted DOE58_RS07745 IPR028082 Periplasmic binding protein-like I DOE58_RS07745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS07745 IPR000843 LacI-type HTH domain DOE58_RS07755 IPR016152 Phosphotransferase/anion transporter DOE58_RS07755 IPR002178 PTS EIIA type-2 domain DOE58_RS07765 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS07770 IPR005474 Transketolase, N-terminal DOE58_RS07770 IPR029061 Thiamin diphosphate-binding fold DOE58_RS07775 IPR020826 Transketolase binding site DOE58_RS07775 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS07775 IPR005474 Transketolase, N-terminal DOE58_RS07775 IPR029061 Thiamin diphosphate-binding fold DOE58_RS07775 IPR005477 Deoxyxylulose-5-phosphate synthase DOE58_RS07775 IPR005475 Transketolase-like, pyrimidine-binding domain DOE58_RS07775 IPR033248 Transketolase, C-terminal domain DOE58_RS07780 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE58_RS07785 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE58_RS07785 IPR010766 DRTGG DOE58_RS07785 IPR002505 Phosphate acetyl/butaryl transferase DOE58_RS07785 IPR016475 Phosphate acetyltransferase, bacteria DOE58_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS07785 IPR004614 Phosphate acetyltransferase DOE58_RS07785 IPR042112 Phosphate acetyltransferase, domain 2 DOE58_RS07785 IPR042113 Phosphate acetyltransferase, domain 1 DOE58_RS07790 IPR004372 Acetate/propionate kinase DOE58_RS07790 IPR000890 Aliphatic acid kinase, short-chain DOE58_RS07790 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE58_RS07795 IPR007334 Uncharacterised protein family UPF0208 DOE58_RS07800 IPR023145 YfbU, helix-hairpin domain superfamily DOE58_RS07800 IPR005587 Uncharacterised protein family UPF0304, YfbU DOE58_RS07800 IPR023146 YfbU, alpha-helical bundle domain superfamily DOE58_RS07805 IPR006439 HAD hydrolase, subfamily IA DOE58_RS07805 IPR036412 HAD-like superfamily DOE58_RS07805 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS07805 IPR023214 HAD superfamily DOE58_RS07805 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS07810 IPR006037 Regulator of K+ conductance, C-terminal DOE58_RS07810 IPR031312 Sodium/sulphate symporter, conserved site DOE58_RS07810 IPR004680 Citrate transporter-like domain DOE58_RS07810 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE58_RS07815 IPR003607 HD/PDEase domain DOE58_RS07815 IPR022971 5'-deoxynucleotidase YfbR DOE58_RS07815 IPR039356 Metal-dependent nucleoside 5'-monophosphatase DOE58_RS07820 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS07820 IPR004839 Aminotransferase, class I/classII DOE58_RS07820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS07820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS07830 IPR005119 LysR, substrate-binding DOE58_RS07830 IPR000847 Transcription regulator HTH, LysR DOE58_RS07830 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS07830 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS07840 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DOE58_RS07840 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DOE58_RS07840 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily DOE58_RS07845 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE58_RS07845 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DOE58_RS07850 IPR001135 NADH-quinone oxidoreductase, subunit D DOE58_RS07850 IPR029014 [NiFe]-hydrogenase, large subunit DOE58_RS07850 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DOE58_RS07850 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DOE58_RS07850 IPR023062 NADH dehydrogenase, subunit CD DOE58_RS07850 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DOE58_RS07850 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DOE58_RS07850 IPR010218 NADH dehydrogenase, subunit C DOE58_RS07850 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DOE58_RS07855 IPR042128 NuoE domain DOE58_RS07855 IPR036249 Thioredoxin-like superfamily DOE58_RS07855 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DOE58_RS07855 IPR002023 NADH-quinone oxidoreductase subunit E-like DOE58_RS07860 IPR019554 Soluble ligand binding domain DOE58_RS07860 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DOE58_RS07860 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE58_RS07860 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE58_RS07860 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DOE58_RS07860 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DOE58_RS07860 IPR011537 NADH ubiquinone oxidoreductase, F subunit DOE58_RS07865 IPR006656 Molybdopterin oxidoreductase DOE58_RS07865 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS07865 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS07865 IPR010228 NADH:ubiquinone oxidoreductase, subunit G DOE58_RS07865 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site DOE58_RS07865 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS07865 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS07865 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DOE58_RS07865 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS07870 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DOE58_RS07870 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DOE58_RS07875 IPR010226 NADH-quinone oxidoreductase, chain I DOE58_RS07875 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS07875 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS07880 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DOE58_RS07880 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DOE58_RS07885 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOE58_RS07885 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DOE58_RS07890 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DOE58_RS07890 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DOE58_RS07890 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DOE58_RS07890 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE58_RS07895 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE58_RS07895 IPR010227 NADH-quinone oxidoreductase, chain M/4 DOE58_RS07895 IPR003918 NADH:ubiquinone oxidoreductase DOE58_RS07900 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DOE58_RS07900 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DOE58_RS07905 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS07905 IPR011006 CheY-like superfamily DOE58_RS07905 IPR002545 CheW-like domain DOE58_RS07905 IPR036061 CheW-like domain superfamily DOE58_RS07905 IPR024181 Chemotaxis response regulator CheV DOE58_RS07910 IPR013469 Ribonuclease BN DOE58_RS07910 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS07910 IPR013471 Ribonuclease Z/BN DOE58_RS07910 IPR001279 Metallo-beta-lactamase DOE58_RS07915 IPR000182 GNAT domain DOE58_RS07915 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS07920 IPR010279 Inner membrane protein YqjD/ElaB DOE58_RS07925 IPR034681 Isochorismate synthase MenF DOE58_RS07925 IPR005801 ADC synthase DOE58_RS07925 IPR015890 Chorismate-utilising enzyme, C-terminal DOE58_RS07925 IPR004561 Isochorismate synthase DOE58_RS07930 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS07930 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase DOE58_RS07930 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS07930 IPR029061 Thiamin diphosphate-binding fold DOE58_RS07930 IPR032264 Menaquinone biosynthesis protein MenD, middle domain DOE58_RS07935 IPR000073 Alpha/beta hydrolase fold-1 DOE58_RS07935 IPR029058 Alpha/Beta hydrolase fold DOE58_RS07935 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase DOE58_RS07940 IPR001753 Enoyl-CoA hydratase/isomerase DOE58_RS07940 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE58_RS07940 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB DOE58_RS07940 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS07940 IPR014748 Enoyl-CoA hydratase, C-terminal DOE58_RS07945 IPR010196 o-Succinylbenzoate synthase, MenC type1 DOE58_RS07945 IPR029065 Enolase C-terminal domain-like DOE58_RS07945 IPR029017 Enolase-like, N-terminal DOE58_RS07945 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS07945 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS07950 IPR020845 AMP-binding, conserved site DOE58_RS07950 IPR000873 AMP-dependent synthetase/ligase DOE58_RS07950 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS07950 IPR010192 2-succinylbenzoate--CoA ligase DOE58_RS07950 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS07955 IPR038679 Signal transduction protein PmrD superfamily DOE58_RS07960 IPR000390 Small multidrug resistance protein family DOE58_RS07960 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF DOE58_RS07965 IPR000390 Small multidrug resistance protein family DOE58_RS07965 IPR000620 EamA domain DOE58_RS07965 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE DOE58_RS07970 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase DOE58_RS07970 IPR003342 Glycosyl transferase family 39/83 DOE58_RS07975 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable DOE58_RS07975 IPR002509 NodB homology domain DOE58_RS07975 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS07980 IPR005793 Formyl transferase, C-terminal DOE58_RS07980 IPR036477 Formyl transferase, N-terminal domain superfamily DOE58_RS07980 IPR011034 Formyl transferase-like, C-terminal domain superfamily DOE58_RS07980 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS07980 IPR002376 Formyl transferase, N-terminal DOE58_RS07980 IPR036291 NAD(P)-binding domain superfamily DOE58_RS07980 IPR021168 Bifunctional polymyxin resistance protein, ArnA DOE58_RS07985 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase DOE58_RS07985 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS07985 IPR001173 Glycosyltransferase 2-like DOE58_RS07990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS07990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS07990 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS07990 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB DOE58_RS07990 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE58_RS07995 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase DOE58_RS07995 IPR029033 Histidine phosphatase superfamily DOE58_RS07995 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS08000 IPR020476 NUDIX hydrolase DOE58_RS08000 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS08000 IPR000086 NUDIX hydrolase domain DOE58_RS08000 IPR023781 Nucleoside triphosphatase NudI DOE58_RS08000 IPR020084 NUDIX hydrolase, conserved site DOE58_RS08005 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS08005 IPR009998 YfaZ DOE58_RS08005 IPR023614 Porin domain superfamily DOE58_RS08010 IPR036425 MoaB/Mog-like domain superfamily DOE58_RS08010 IPR008135 Competence-induced protein CinA DOE58_RS08010 IPR001453 MoaB/Mog domain DOE58_RS08010 IPR036653 CinA-like, C-terminal DOE58_RS08030 IPR004017 Cysteine-rich domain DOE58_RS08030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS08030 IPR009051 Alpha-helical ferredoxin DOE58_RS08030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS08030 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit DOE58_RS08035 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE58_RS08035 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS08035 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit DOE58_RS08040 IPR007419 BFD-like [2Fe-2S]-binding domain DOE58_RS08040 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit DOE58_RS08040 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DOE58_RS08040 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DOE58_RS08040 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS08040 IPR006076 FAD dependent oxidoreductase DOE58_RS08045 IPR020846 Major facilitator superfamily domain DOE58_RS08045 IPR005267 Glycerol-3-phosphate transporter DOE58_RS08045 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE58_RS08045 IPR000849 Sugar phosphate transporter DOE58_RS08045 IPR011701 Major facilitator superfamily DOE58_RS08045 IPR036259 MFS transporter superfamily DOE58_RS08050 IPR030395 Glycerophosphodiester phosphodiesterase domain DOE58_RS08050 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DOE58_RS08055 IPR005119 LysR, substrate-binding DOE58_RS08055 IPR000847 Transcription regulator HTH, LysR DOE58_RS08055 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS08055 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08060 IPR036259 MFS transporter superfamily DOE58_RS08060 IPR020846 Major facilitator superfamily domain DOE58_RS08060 IPR011701 Major facilitator superfamily DOE58_RS08065 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS08065 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE58_RS08065 IPR012675 Beta-grasp domain superfamily DOE58_RS08065 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS08070 IPR012348 Ribonucleotide reductase-like DOE58_RS08070 IPR009078 Ferritin-like superfamily DOE58_RS08070 IPR033909 Ribonucleotide reductase small subunit DOE58_RS08070 IPR030475 Ribonucleotide reductase small subunit, acitve site DOE58_RS08070 IPR000358 Ribonucleotide reductase small subunit family DOE58_RS08075 IPR005144 ATP-cone domain DOE58_RS08075 IPR000788 Ribonucleotide reductase large subunit, C-terminal DOE58_RS08075 IPR039718 Ribonucleoside-diphosphate reductase large subunit DOE58_RS08075 IPR013346 Ribonucleotide reductase, class I , alpha subunit DOE58_RS08075 IPR013509 Ribonucleotide reductase large subunit, N-terminal DOE58_RS08075 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DOE58_RS08080 IPR010233 Ubiquinone biosynthesis O-methyltransferase DOE58_RS08080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS08090 IPR036259 MFS transporter superfamily DOE58_RS08090 IPR011701 Major facilitator superfamily DOE58_RS08090 IPR020846 Major facilitator superfamily domain DOE58_RS08095 IPR034593 Mandelate racemase-like DOE58_RS08095 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS08095 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS08095 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS08095 IPR029065 Enolase C-terminal domain-like DOE58_RS08095 IPR023592 D-galactonate dehydratase DOE58_RS08095 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS08095 IPR029017 Enolase-like, N-terminal DOE58_RS08105 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DOE58_RS08105 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE58_RS08105 IPR005743 DNA gyrase, subunit A DOE58_RS08105 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DOE58_RS08105 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DOE58_RS08105 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DOE58_RS08105 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DOE58_RS08110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS08110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS08110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS08110 IPR030856 Sensor histidine kinase RcsC DOE58_RS08110 IPR038388 RcsC, C-terminal domain superfamily DOE58_RS08110 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS08110 IPR011006 CheY-like superfamily DOE58_RS08110 IPR005467 Histidine kinase domain DOE58_RS08110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS08110 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS08110 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal DOE58_RS08115 IPR030864 Transcriptional regulatory protein RcsB DOE58_RS08115 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS08115 IPR011006 CheY-like superfamily DOE58_RS08115 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS08115 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08115 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS08120 IPR030861 Phosphotransferase RcsD DOE58_RS08120 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain DOE58_RS08120 IPR036641 HPT domain superfamily DOE58_RS08120 IPR005467 Histidine kinase domain DOE58_RS08120 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS08120 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS08120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS08120 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily DOE58_RS08130 IPR001897 Porin, gammaproteobacterial DOE58_RS08130 IPR001702 Porin, Gram-negative type DOE58_RS08130 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS08130 IPR023614 Porin domain superfamily DOE58_RS08135 IPR003374 ApbE-like superfamily DOE58_RS08135 IPR024932 Flavin transferase ApbE DOE58_RS08135 IPR042159 Flavin-trafficking protein ApbE DOE58_RS08140 IPR018062 HTH domain AraC-type, conserved site DOE58_RS08140 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DOE58_RS08140 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS08140 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOE58_RS08140 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOE58_RS08140 IPR009057 Homeobox-like domain superfamily DOE58_RS08140 IPR035451 Ada-like domain superfamily DOE58_RS08140 IPR016221 Bifunctional regulatory protein Ada DOE58_RS08140 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08140 IPR004026 Ada DNA repair, metal-binding DOE58_RS08140 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DOE58_RS08140 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DOE58_RS08145 IPR004574 Alkylated DNA repair protein AlkB DOE58_RS08145 IPR005123 Oxoglutarate/iron-dependent dioxygenase DOE58_RS08145 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DOE58_RS08145 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DOE58_RS08150 IPR003593 AAA+ ATPase domain DOE58_RS08150 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS08150 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS08150 IPR017871 ABC transporter, conserved site DOE58_RS08150 IPR005898 Cyclic peptide transporter DOE58_RS08150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08150 IPR003439 ABC transporter-like DOE58_RS08155 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria DOE58_RS08155 IPR027438 Ecotin, C-terminal DOE58_RS08155 IPR005658 Proteinase inhibitor I11, ecotin DOE58_RS08155 IPR036198 Ecotin superfamily DOE58_RS08160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS08160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS08160 IPR004496 Ferredoxin-type protein NapF DOE58_RS08165 IPR005623 Chaperone NapD, nitrate reductase assembly DOE58_RS08170 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS08170 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS08170 IPR010051 Periplasmic nitrate reductase, large subunit DOE58_RS08170 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS08170 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS08170 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain DOE58_RS08170 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS08170 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS08170 IPR006656 Molybdopterin oxidoreductase DOE58_RS08175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS08175 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS08175 IPR004494 MauM/NapG ferredoxin-type protein DOE58_RS08175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS08180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS08180 IPR011886 Ferredoxin-type protein, NapH/MauN family DOE58_RS08180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS08185 IPR036280 Multiheme cytochrome superfamily DOE58_RS08185 IPR011031 Multihaem cytochrome DOE58_RS08185 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DOE58_RS08190 IPR024717 Denitrification system component NapC/NirT/NrfH DOE58_RS08190 IPR036280 Multiheme cytochrome superfamily DOE58_RS08190 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT DOE58_RS08190 IPR038266 NapC/NirT cytochrome c superfamily DOE58_RS08190 IPR011031 Multihaem cytochrome DOE58_RS08190 IPR005126 NapC/NirT cytochrome c, N-terminal DOE58_RS08195 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08195 IPR017871 ABC transporter, conserved site DOE58_RS08195 IPR005895 ABC transporter, haem export, CcmA DOE58_RS08195 IPR003593 AAA+ ATPase domain DOE58_RS08195 IPR003439 ABC transporter-like DOE58_RS08200 IPR003544 Cytochrome c-type biogenesis protein CcmB DOE58_RS08200 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DOE58_RS08205 IPR003557 Cytochrome c-type biogenesis protein CcmC DOE58_RS08205 IPR002541 Cytochrome c assembly protein DOE58_RS08210 IPR007078 Haem exporter protein D (CcmD) DOE58_RS08215 IPR036127 CcmE-like superfamily DOE58_RS08215 IPR004329 CcmE/CycJ protein DOE58_RS08220 IPR003568 Cytochrome c-type biogenesis protein CcmF DOE58_RS08220 IPR003567 Cytochrome c-type biogenesis protein DOE58_RS08220 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOE58_RS08220 IPR002541 Cytochrome c assembly protein DOE58_RS08225 IPR013766 Thioredoxin domain DOE58_RS08225 IPR017937 Thioredoxin, conserved site DOE58_RS08225 IPR036249 Thioredoxin-like superfamily DOE58_RS08225 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE DOE58_RS08225 IPR013740 Redoxin DOE58_RS08230 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOE58_RS08230 IPR019734 Tetratricopeptide repeat DOE58_RS08230 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS08230 IPR005616 CcmH/CycL/Ccl2/NrfF family DOE58_RS08230 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS08235 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS08235 IPR011006 CheY-like superfamily DOE58_RS08235 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS08235 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS08280 IPR024588 Inner membrane protein YejM, N-terminal DOE58_RS08280 IPR000917 Sulfatase, N-terminal DOE58_RS08280 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS08280 IPR012159 Inner membrane protein YejM DOE58_RS08285 IPR023202 YejL-like superfamily DOE58_RS08285 IPR009857 Uncharacterised protein family UPF0352 DOE58_RS08290 IPR007358 Nucleoid-associated protein NdpA DOE58_RS08295 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOE58_RS08295 IPR029751 Ribosomal protein L25 DOE58_RS08295 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOE58_RS08295 IPR020055 Ribosomal protein L25, short-form DOE58_RS08300 IPR006935 Helicase/UvrB, N-terminal DOE58_RS08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08300 IPR011332 Zinc-binding ribosomal protein DOE58_RS08300 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS08300 IPR001650 Helicase, C-terminal DOE58_RS08305 IPR036986 RNA-binding S4 domain superfamily DOE58_RS08305 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE58_RS08305 IPR002942 RNA-binding S4 domain DOE58_RS08305 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE58_RS08305 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE58_RS08305 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS08305 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS08310 IPR036259 MFS transporter superfamily DOE58_RS08310 IPR004734 Multidrug resistance protein DOE58_RS08310 IPR011701 Major facilitator superfamily DOE58_RS08310 IPR020846 Major facilitator superfamily domain DOE58_RS08310 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DOE58_RS08320 IPR020489 Uncharacterised protein family YejG DOE58_RS08325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS08325 IPR017871 ABC transporter, conserved site DOE58_RS08325 IPR003593 AAA+ ATPase domain DOE58_RS08325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08325 IPR003439 ABC transporter-like DOE58_RS08330 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS08330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS08330 IPR035906 MetI-like superfamily DOE58_RS08335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS08335 IPR035906 MetI-like superfamily DOE58_RS08340 IPR000914 Solute-binding protein family 5 domain DOE58_RS08340 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS08340 IPR039424 Solute-binding protein family 5 DOE58_RS08345 IPR035919 EAL domain superfamily DOE58_RS08345 IPR001633 EAL domain DOE58_RS08345 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE58_RS08355 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS08355 IPR000064 Endopeptidase, NLPC/P60 domain DOE58_RS08365 IPR032908 Lipid A 1-diphosphate synthase DOE58_RS08365 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE58_RS08365 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE58_RS08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08370 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE58_RS08370 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE58_RS08375 IPR015365 Elongation factor P, C-terminal DOE58_RS08375 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS08375 IPR014722 Ribosomal protein L2, domain 2 DOE58_RS08375 IPR020599 Translation elongation factor P/YeiP DOE58_RS08375 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS08375 IPR013852 Translation elongation factor P/YeiP, conserved site DOE58_RS08375 IPR013185 Translation elongation factor, KOW-like DOE58_RS08375 IPR011897 Translation elongation factor P-like, YeiP DOE58_RS08375 IPR001059 Translation elongation factor P/YeiP, central DOE58_RS08385 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE58_RS08400 IPR004750 Sugar efflux DOE58_RS08400 IPR036259 MFS transporter superfamily DOE58_RS08400 IPR011701 Major facilitator superfamily DOE58_RS08400 IPR020846 Major facilitator superfamily domain DOE58_RS08410 IPR000032 Phosphocarrier protein HPr-like DOE58_RS08410 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE58_RS08410 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE58_RS08410 IPR002178 PTS EIIA type-2 domain DOE58_RS08410 IPR016152 Phosphotransferase/anion transporter DOE58_RS08410 IPR035895 HPr-like superfamily DOE58_RS08415 IPR011611 Carbohydrate kinase PfkB DOE58_RS08415 IPR029056 Ribokinase-like DOE58_RS08415 IPR017583 Tagatose/fructose phosphokinase DOE58_RS08415 IPR022463 Fructose 1-phosphate kinase DOE58_RS08415 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS08420 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS08420 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS08420 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE58_RS08420 IPR036095 PTS system IIB component-like superfamily DOE58_RS08420 IPR003352 Phosphotransferase system, EIIC DOE58_RS08420 IPR006327 Phosphotransferase system, fructose IIC component DOE58_RS08420 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS08425 IPR013022 Xylose isomerase-like, TIM barrel domain DOE58_RS08425 IPR036237 Xylose isomerase-like superfamily DOE58_RS08425 IPR018246 AP endonuclease 2, zinc binding site DOE58_RS08425 IPR001719 AP endonuclease 2 DOE58_RS08430 IPR018383 Uncharacterised protein family UPF0324, prokaryote DOE58_RS08430 IPR004630 Uncharacterised protein family UPF0324, bacteria DOE58_RS08435 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08435 IPR000847 Transcription regulator HTH, LysR DOE58_RS08435 IPR005119 LysR, substrate-binding DOE58_RS08435 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS08440 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS08440 IPR004840 Amino acid permease, conserved site DOE58_RS08450 IPR010916 TonB box, conserved site DOE58_RS08450 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS08450 IPR010917 TonB-dependent receptor, conserved site DOE58_RS08450 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS08450 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS08450 IPR039426 Vitamin B12 transporter BtuB-like DOE58_RS08450 IPR012910 TonB-dependent receptor, plug domain DOE58_RS08455 IPR011701 Major facilitator superfamily DOE58_RS08455 IPR021159 Glycerate/sugar phosphate transporter, conserved site DOE58_RS08455 IPR000849 Sugar phosphate transporter DOE58_RS08455 IPR020846 Major facilitator superfamily domain DOE58_RS08455 IPR036259 MFS transporter superfamily DOE58_RS08460 IPR023190 Phosphoserine phosphatase, domain 2 DOE58_RS08460 IPR023214 HAD superfamily DOE58_RS08460 IPR036412 HAD-like superfamily DOE58_RS08460 IPR041449 Phosphoserine phosphatase, N-terminal DOE58_RS08465 IPR029009 Allosteric substrate binding domain superfamily DOE58_RS08465 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE58_RS08465 IPR005131 Serine dehydratase beta chain DOE58_RS08465 IPR005130 Serine dehydratase-like, alpha subunit DOE58_RS08475 IPR000801 Putative esterase DOE58_RS08475 IPR014186 S-formylglutathione hydrolase DOE58_RS08475 IPR029058 Alpha/Beta hydrolase fold DOE58_RS08485 IPR001474 GTP cyclohydrolase I DOE58_RS08485 IPR018234 GTP cyclohydrolase I, conserved site DOE58_RS08485 IPR020602 GTP cyclohydrolase I domain DOE58_RS08490 IPR007349 Domain of unknown function DUF418 DOE58_RS08495 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS08495 IPR000843 LacI-type HTH domain DOE58_RS08495 IPR028082 Periplasmic binding protein-like I DOE58_RS08500 IPR025997 Periplasmic binding protein DOE58_RS08500 IPR028082 Periplasmic binding protein-like I DOE58_RS08505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08505 IPR003593 AAA+ ATPase domain DOE58_RS08505 IPR015862 ABC transporter, galactose import, MglA DOE58_RS08505 IPR017871 ABC transporter, conserved site DOE58_RS08505 IPR003439 ABC transporter-like DOE58_RS08510 IPR001851 ABC transporter, permease DOE58_RS08510 IPR030158 Galactoside transport system permease protein MglC DOE58_RS08515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS08515 IPR013785 Aldolase-type TIM barrel DOE58_RS08515 IPR005720 Dihydroorotate dehydrogenase domain DOE58_RS08515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS08520 IPR009051 Alpha-helical ferredoxin DOE58_RS08520 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS08520 IPR028261 Dihydroprymidine dehydrogenase domain II DOE58_RS08520 IPR023753 FAD/NAD(P)-binding domain DOE58_RS08525 IPR020155 Uncharacterised protein family YeiS DOE58_RS08530 IPR023604 Uncharacterised protein family SanA DOE58_RS08530 IPR003848 Domain of unknown function DUF218 DOE58_RS08535 IPR020797 Cytidine deaminase, bacteria DOE58_RS08535 IPR016193 Cytidine deaminase-like DOE58_RS08535 IPR006263 Cytidine deaminase, homodimeric DOE58_RS08535 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain DOE58_RS08535 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE58_RS08535 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE58_RS08540 IPR005261 Conserved hypothetical protein CHP00659 DOE58_RS08540 IPR007300 CidB/LrgB family DOE58_RS08545 IPR005538 LrgA/CidA family DOE58_RS08545 IPR022957 Uncharacterised protein family UPF0299 DOE58_RS08550 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS08550 IPR005119 LysR, substrate-binding DOE58_RS08550 IPR000847 Transcription regulator HTH, LysR DOE58_RS08550 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08550 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain DOE58_RS08555 IPR011701 Major facilitator superfamily DOE58_RS08555 IPR020846 Major facilitator superfamily domain DOE58_RS08555 IPR036259 MFS transporter superfamily DOE58_RS08560 IPR011051 RmlC-like cupin domain superfamily DOE58_RS08560 IPR014710 RmlC-like jelly roll fold DOE58_RS08560 IPR013096 Cupin 2, conserved barrel DOE58_RS08565 IPR011234 Fumarylacetoacetase-like, C-terminal DOE58_RS08565 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE58_RS08570 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DOE58_RS08570 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DOE58_RS08570 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS08570 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS08570 IPR005955 Glutathione S-transferases, class Zeta DOE58_RS08570 IPR040079 Glutathione Transferase family DOE58_RS08570 IPR036249 Thioredoxin-like superfamily DOE58_RS08570 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS08570 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS08575 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS08575 IPR002938 FAD-binding domain DOE58_RS08580 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE58_RS08580 IPR001269 tRNA-dihydrouridine synthase DOE58_RS08580 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal DOE58_RS08580 IPR032886 tRNA-dihydrouridine(16) synthase DOE58_RS08580 IPR035587 DUS-like, FMN-binding domain DOE58_RS08580 IPR013785 Aldolase-type TIM barrel DOE58_RS08590 IPR003423 Outer membrane efflux protein DOE58_RS08590 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE58_RS08595 IPR036291 NAD(P)-binding domain superfamily DOE58_RS08595 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS08595 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS08600 IPR032816 SNARE associated Golgi protein DOE58_RS08605 IPR006977 Yip1 domain DOE58_RS08615 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE58_RS08615 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE58_RS08615 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS08620 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 DOE58_RS08620 IPR012256 D-lactate dehydrogenase DOE58_RS08620 IPR016166 FAD-binding domain, PCMH-type DOE58_RS08620 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 DOE58_RS08620 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS08620 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE58_RS08620 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS08620 IPR006094 FAD linked oxidase, N-terminal DOE58_RS08620 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal DOE58_RS08620 IPR016164 FAD-linked oxidase-like, C-terminal DOE58_RS08625 IPR013783 Immunoglobulin-like fold DOE58_RS08625 IPR026891 Fibronectin type III-like domain DOE58_RS08625 IPR001764 Glycoside hydrolase, family 3, N-terminal DOE58_RS08625 IPR002772 Glycoside hydrolase family 3 C-terminal domain DOE58_RS08625 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DOE58_RS08625 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOE58_RS08625 IPR017853 Glycoside hydrolase superfamily DOE58_RS08625 IPR019800 Glycoside hydrolase, family 3, active site DOE58_RS08630 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE58_RS08635 IPR035906 MetI-like superfamily DOE58_RS08635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS08640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08640 IPR017871 ABC transporter, conserved site DOE58_RS08640 IPR003439 ABC transporter-like DOE58_RS08640 IPR003593 AAA+ ATPase domain DOE58_RS08645 IPR035906 MetI-like superfamily DOE58_RS08645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS08650 IPR020870 Uncharacterised protein family UPF0387, membrane DOE58_RS08655 IPR009061 Putative DNA-binding domain superfamily DOE58_RS08655 IPR000551 MerR-type HTH domain DOE58_RS08660 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region DOE58_RS08660 IPR010559 Signal transduction histidine kinase, internal region DOE58_RS08660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS08660 IPR003018 GAF domain DOE58_RS08665 IPR011006 CheY-like superfamily DOE58_RS08665 IPR007492 LytTR DNA-binding domain DOE58_RS08665 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS08670 IPR009921 Domain of unknown function DUF1456 DOE58_RS08680 IPR036699 YehR-like superfamily DOE58_RS08680 IPR009736 Protein of unknown function DUF1307 DOE58_RS08685 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS08685 IPR002547 tRNA-binding domain DOE58_RS08685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS08685 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS08685 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal DOE58_RS08685 IPR029038 Methionyl-tRNA synthetase, Zn-domain DOE58_RS08685 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS08685 IPR033911 Methioninyl-tRNA synthetase core domain DOE58_RS08685 IPR015413 Methionyl/Leucyl tRNA synthetase DOE58_RS08685 IPR014758 Methionyl-tRNA synthetase DOE58_RS08685 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain DOE58_RS08685 IPR023458 Methionine-tRNA ligase, type 1 DOE58_RS08690 IPR034904 Fe-S cluster assembly domain superfamily DOE58_RS08690 IPR019591 Mrp/NBP35 ATP-binding protein DOE58_RS08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08690 IPR000808 Mrp, conserved site DOE58_RS08690 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOE58_RS08705 IPR018046 Pili assembly chaperone, conserved site DOE58_RS08705 IPR013783 Immunoglobulin-like fold DOE58_RS08705 IPR008962 PapD-like superfamily DOE58_RS08705 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS08705 IPR001829 Pili assembly chaperone, bacterial DOE58_RS08705 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS08705 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS08710 IPR025885 PapC, N-terminal domain DOE58_RS08710 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS08710 IPR037224 PapC, N-terminal domain superfamily DOE58_RS08710 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS08710 IPR000015 Outer membrane usher protein DOE58_RS08710 IPR025949 PapC-like, C-terminal domain DOE58_RS08715 IPR000259 Fimbrial-type adhesion domain DOE58_RS08715 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS08715 IPR008966 Adhesion domain superfamily DOE58_RS08715 IPR016959 Uncharacterised conserved protein UCP030811 DOE58_RS08720 IPR024572 Nickel/cobalt homeostasis protein RcnB DOE58_RS08725 IPR029056 Ribokinase-like DOE58_RS08725 IPR000417 Hydroxyethylthiazole kinase DOE58_RS08730 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DOE58_RS08730 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE58_RS08730 IPR029056 Ribokinase-like DOE58_RS08735 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08735 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS08735 IPR011663 UbiC transcription regulator-associated DOE58_RS08735 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS08735 IPR000524 Transcription regulator HTH, GntR DOE58_RS08740 IPR002139 Ribokinase/fructokinase DOE58_RS08740 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS08740 IPR011611 Carbohydrate kinase PfkB DOE58_RS08740 IPR029056 Ribokinase-like DOE58_RS08745 IPR036705 ADP-ribosylation/Crystallin J1 superfamily DOE58_RS08745 IPR005502 ADP-ribosylation/Crystallin J1 DOE58_RS08750 IPR020846 Major facilitator superfamily domain DOE58_RS08750 IPR004740 Nucleoside:H+ symporter DOE58_RS08750 IPR036259 MFS transporter superfamily DOE58_RS08755 IPR013785 Aldolase-type TIM barrel DOE58_RS08755 IPR041720 Aldolase FbaB-like, archaeal-type DOE58_RS08755 IPR002915 DeoC/FbaB/ lacD aldolase DOE58_RS08760 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DOE58_RS08760 IPR005218 Diacylglycerol/lipid kinase DOE58_RS08760 IPR001206 Diacylglycerol kinase, catalytic domain DOE58_RS08760 IPR022433 Lipid kinase YegS DOE58_RS08760 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE58_RS08770 IPR010261 Tir chaperone protein (CesT) family DOE58_RS08780 IPR001539 Peptidase U32 DOE58_RS08780 IPR032525 Peptidase family U32, C-terminal DOE58_RS08805 IPR011006 CheY-like superfamily DOE58_RS08805 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS08805 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS08805 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS08805 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS08805 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS08810 IPR003660 HAMP domain DOE58_RS08810 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS08810 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS08810 IPR005467 Histidine kinase domain DOE58_RS08810 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS08810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS08810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS08815 IPR011701 Major facilitator superfamily DOE58_RS08815 IPR020846 Major facilitator superfamily domain DOE58_RS08815 IPR036259 MFS transporter superfamily DOE58_RS08815 IPR023721 Multidrug resistance protein MdtD DOE58_RS08820 IPR023931 Multidrug resistance protein MdtC DOE58_RS08820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS08820 IPR001036 Acriflavin resistance protein DOE58_RS08825 IPR022831 Multidrug resistance protein MdtB DOE58_RS08825 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS08825 IPR001036 Acriflavin resistance protein DOE58_RS08830 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DOE58_RS08830 IPR022824 Multidrug resistance protein MdtA DOE58_RS08830 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS08840 IPR042054 YegD-like DOE58_RS08840 IPR018181 Heat shock protein 70, conserved site DOE58_RS08840 IPR013126 Heat shock protein 70 family DOE58_RS08850 IPR003265 HhH-GPD domain DOE58_RS08850 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE58_RS08850 IPR011257 DNA glycosylase DOE58_RS08850 IPR000035 Alkylbase DNA glycosidase, conserved site DOE58_RS08850 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DOE58_RS08850 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DOE58_RS08855 IPR001633 EAL domain DOE58_RS08855 IPR000700 PAS-associated, C-terminal DOE58_RS08855 IPR035965 PAS domain superfamily DOE58_RS08855 IPR000160 GGDEF domain DOE58_RS08855 IPR007895 MASE1 DOE58_RS08855 IPR029787 Nucleotide cyclase DOE58_RS08855 IPR001610 PAC motif DOE58_RS08855 IPR013655 PAS fold-3 DOE58_RS08855 IPR013656 PAS fold-4 DOE58_RS08855 IPR035919 EAL domain superfamily DOE58_RS08855 IPR000014 PAS domain DOE58_RS08860 IPR000764 Uridine kinase-like DOE58_RS08860 IPR026008 Uridine kinase DOE58_RS08860 IPR006083 Phosphoribulokinase/uridine kinase DOE58_RS08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08865 IPR011962 dCTP deaminase DOE58_RS08865 IPR029054 dUTPase-like DOE58_RS08865 IPR036157 dUTPase-like superfamily DOE58_RS08865 IPR033704 dUTPase, trimeric DOE58_RS08870 IPR007844 AsmA DOE58_RS08875 IPR005170 Transporter-associated domain DOE58_RS08875 IPR005496 Integral membrane protein TerC DOE58_RS08875 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS08875 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS08875 IPR000644 CBS domain DOE58_RS08885 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain DOE58_RS08885 IPR019554 Soluble ligand binding domain DOE58_RS08885 IPR003715 Polysaccharide export protein DOE58_RS08890 IPR017867 Protein-tyrosine phosphatase, low molecular weight DOE58_RS08890 IPR023485 Phosphotyrosine protein phosphatase I DOE58_RS08890 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOE58_RS08895 IPR032807 Tyrosine kinase, G-rich domain DOE58_RS08895 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE58_RS08895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS08895 IPR005702 Exopolysaccharide synthesis protein DOE58_RS08895 IPR025669 AAA domain DOE58_RS08900 IPR001173 Glycosyltransferase 2-like DOE58_RS08900 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA DOE58_RS08900 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS08905 IPR011004 Trimeric LpxA-like superfamily DOE58_RS08905 IPR018357 Hexapeptide transferase, conserved site DOE58_RS08905 IPR001451 Hexapeptide repeat DOE58_RS08905 IPR005881 Serine O-acetyltransferase DOE58_RS08905 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB DOE58_RS08910 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC DOE58_RS08910 IPR001296 Glycosyl transferase, family 1 DOE58_RS08910 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS08915 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD DOE58_RS08920 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE DOE58_RS08920 IPR001173 Glycosyltransferase 2-like DOE58_RS08920 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS08925 IPR011004 Trimeric LpxA-like superfamily DOE58_RS08925 IPR018357 Hexapeptide transferase, conserved site DOE58_RS08925 IPR001451 Hexapeptide repeat DOE58_RS08925 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF DOE58_RS08930 IPR036291 NAD(P)-binding domain superfamily DOE58_RS08930 IPR016040 NAD(P)-binding domain DOE58_RS08930 IPR006368 GDP-mannose 4,6-dehydratase DOE58_RS08935 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS08935 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase DOE58_RS08935 IPR036291 NAD(P)-binding domain superfamily DOE58_RS08940 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS08940 IPR033715 GDP-mannose mannosyl hydrolase DOE58_RS08940 IPR020084 NUDIX hydrolase, conserved site DOE58_RS08940 IPR000086 NUDIX hydrolase domain DOE58_RS08940 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria DOE58_RS08945 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS08945 IPR001296 Glycosyl transferase, family 1 DOE58_RS08945 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI DOE58_RS08950 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DOE58_RS08950 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DOE58_RS08950 IPR005835 Nucleotidyl transferase domain DOE58_RS08950 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS08950 IPR014710 RmlC-like jelly roll fold DOE58_RS08950 IPR011051 RmlC-like cupin domain superfamily DOE58_RS08955 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE58_RS08955 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE58_RS08955 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE58_RS08955 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE58_RS08955 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE58_RS08955 IPR005841 Alpha-D-phosphohexomutase superfamily DOE58_RS08955 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE58_RS08955 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE58_RS08960 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DOE58_RS08960 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DOE58_RS08960 IPR003362 Bacterial sugar transferase DOE58_RS08970 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK DOE58_RS08970 IPR007345 Polysaccharide pyruvyl transferase DOE58_RS08975 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL DOE58_RS08975 IPR001296 Glycosyl transferase, family 1 DOE58_RS08975 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS08980 IPR011050 Pectin lyase fold/virulence factor DOE58_RS08980 IPR023882 Colanic acid biosynthesis WcaM DOE58_RS08980 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS08980 IPR012334 Pectin lyase fold DOE58_RS08985 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit DOE58_RS08985 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DOE58_RS08985 IPR005835 Nucleotidyl transferase domain DOE58_RS08985 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS08990 IPR036291 NAD(P)-binding domain superfamily DOE58_RS08990 IPR016040 NAD(P)-binding domain DOE58_RS08990 IPR005888 dTDP-glucose 4,6-dehydratase DOE58_RS08995 IPR036291 NAD(P)-binding domain superfamily DOE58_RS08995 IPR029903 RmlD-like substrate binding domain DOE58_RS08995 IPR005913 dTDP-4-dehydrorhamnose reductase family DOE58_RS09000 IPR005835 Nucleotidyl transferase domain DOE58_RS09000 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS09000 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOE58_RS09005 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DOE58_RS09005 IPR014710 RmlC-like jelly roll fold DOE58_RS09005 IPR011051 RmlC-like cupin domain superfamily DOE58_RS09010 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS09010 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS09010 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS09010 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DOE58_RS09010 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS09010 IPR012675 Beta-grasp domain superfamily DOE58_RS09010 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE58_RS09010 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS09010 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS09010 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE58_RS09015 IPR005835 Nucleotidyl transferase domain DOE58_RS09015 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS09015 IPR013446 Glucose-1-phosphate cytidylyltransferase DOE58_RS09020 IPR016040 NAD(P)-binding domain DOE58_RS09020 IPR013445 CDP-glucose 4,6-dehydratase DOE58_RS09020 IPR036291 NAD(P)-binding domain superfamily DOE58_RS09025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS09025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS09025 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE58_RS09025 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS09030 IPR036291 NAD(P)-binding domain superfamily DOE58_RS09030 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS09040 IPR001173 Glycosyltransferase 2-like DOE58_RS09040 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS09045 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DOE58_RS09045 IPR001296 Glycosyl transferase, family 1 DOE58_RS09050 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS09050 IPR001173 Glycosyltransferase 2-like DOE58_RS09055 IPR014710 RmlC-like jelly roll fold DOE58_RS09055 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS09055 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DOE58_RS09055 IPR005835 Nucleotidyl transferase domain DOE58_RS09055 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DOE58_RS09055 IPR011051 RmlC-like cupin domain superfamily DOE58_RS09060 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE58_RS09060 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE58_RS09060 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE58_RS09060 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE58_RS09060 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE58_RS09060 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE58_RS09060 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE58_RS09065 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP DOE58_RS09065 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DOE58_RS09065 IPR003362 Bacterial sugar transferase DOE58_RS09070 IPR006184 6-phosphogluconate-binding site DOE58_RS09070 IPR006114 6-phosphogluconate dehydrogenase, C-terminal DOE58_RS09070 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating DOE58_RS09070 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE58_RS09070 IPR036291 NAD(P)-binding domain superfamily DOE58_RS09070 IPR006183 6-phosphogluconate dehydrogenase DOE58_RS09070 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS09070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS09080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS09080 IPR036291 NAD(P)-binding domain superfamily DOE58_RS09080 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOE58_RS09080 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOE58_RS09080 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOE58_RS09080 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOE58_RS09080 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOE58_RS09080 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DOE58_RS09085 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE58_RS09090 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase DOE58_RS09090 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily DOE58_RS09090 IPR023019 Histidine biosynthesis bifunctional protein HisIE DOE58_RS09090 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain DOE58_RS09090 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like DOE58_RS09095 IPR011060 Ribulose-phosphate binding barrel DOE58_RS09095 IPR013785 Aldolase-type TIM barrel DOE58_RS09095 IPR006062 Histidine biosynthesis DOE58_RS09095 IPR004651 Histidine biosynthesis, HisF DOE58_RS09100 IPR013785 Aldolase-type TIM barrel DOE58_RS09100 IPR006062 Histidine biosynthesis DOE58_RS09100 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DOE58_RS09100 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DOE58_RS09100 IPR011060 Ribulose-phosphate binding barrel DOE58_RS09105 IPR029062 Class I glutamine amidotransferase-like DOE58_RS09105 IPR010139 Imidazole glycerol phosphate synthase, subunit H DOE58_RS09105 IPR017926 Glutamine amidotransferase DOE58_RS09110 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS09110 IPR000807 Imidazoleglycerol-phosphate dehydratase DOE58_RS09110 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DOE58_RS09110 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DOE58_RS09110 IPR023214 HAD superfamily DOE58_RS09110 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily DOE58_RS09110 IPR005954 Histidinol-phosphatase DOE58_RS09110 IPR006543 Histidinol-phosphate phosphatase DOE58_RS09110 IPR020566 Histidine biosynthesis bifunctional protein HisB DOE58_RS09110 IPR036412 HAD-like superfamily DOE58_RS09115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS09115 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS09115 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE58_RS09115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS09115 IPR005861 Histidinol-phosphate aminotransferase family DOE58_RS09115 IPR004839 Aminotransferase, class I/classII DOE58_RS09120 IPR001692 Histidinol dehydrogenase, conserved site DOE58_RS09120 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS09120 IPR022695 Histidinol dehydrogenase, monofunctional DOE58_RS09120 IPR012131 Histidinol dehydrogenase DOE58_RS09125 IPR013115 Histidine biosynthesis HisG, C-terminal DOE58_RS09125 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE58_RS09125 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE58_RS09125 IPR020621 ATP phosphoribosyltransferase HisG, long form DOE58_RS09125 IPR001348 ATP phosphoribosyltransferase HisG DOE58_RS09125 IPR018198 ATP phosphoribosyltransferase, conserved site DOE58_RS09125 IPR013820 ATP phosphoribosyltransferase, catalytic domain DOE58_RS09135 IPR036291 NAD(P)-binding domain superfamily DOE58_RS09135 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS09140 IPR005119 LysR, substrate-binding DOE58_RS09140 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS09140 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS09140 IPR000847 Transcription regulator HTH, LysR DOE58_RS09150 IPR002293 Amino acid/polyamine transporter I DOE58_RS09155 IPR034748 Exonuclease I, C-terminal alpha-helical domain DOE58_RS09155 IPR023607 Exodeoxyribonuclease I DOE58_RS09155 IPR034747 Exonuclease I, SH3-like domain DOE58_RS09155 IPR013620 Exodeoxyribonuclease I, C-terminal DOE58_RS09155 IPR036397 Ribonuclease H superfamily DOE58_RS09155 IPR012337 Ribonuclease H-like superfamily DOE58_RS09155 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE58_RS09155 IPR038649 Exonuclease I, SH3-like domain superfamily DOE58_RS09160 IPR001646 Pentapeptide repeat DOE58_RS09160 IPR025726 E3 ubiquitin ligase SopA-like central domain DOE58_RS09160 IPR038270 SopA-like, catalytic domain superfamily DOE58_RS09160 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain DOE58_RS09175 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS09175 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS09175 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS09175 IPR006656 Molybdopterin oxidoreductase DOE58_RS09175 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS09175 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS09175 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS09175 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS09180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS09180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS09185 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS09185 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS09190 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE58_RS09190 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE58_RS09190 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE58_RS09190 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE58_RS09190 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE58_RS09190 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS09195 IPR010499 Bacterial transcription activator, effector binding DOE58_RS09195 IPR024911 DNA gyrase inhibitor GyrI DOE58_RS09195 IPR029442 GyrI-like small molecule binding domain DOE58_RS09195 IPR011256 Regulatory factor, effector binding domain superfamily DOE58_RS09200 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE58_RS09205 IPR007458 Protein of unknown function DUF496 DOE58_RS09210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS09210 IPR006204 GHMP kinase N-terminal domain DOE58_RS09210 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related DOE58_RS09210 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS09215 IPR024896 Propionate kinase PduW DOE58_RS09215 IPR000890 Aliphatic acid kinase, short-chain DOE58_RS09215 IPR023865 Aliphatic acid kinase, short-chain, conserved site DOE58_RS09215 IPR004372 Acetate/propionate kinase DOE58_RS09220 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09220 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV DOE58_RS09225 IPR037233 CcmK-like superfamily DOE58_RS09225 IPR009307 Ethanolamine utilisation EutS DOE58_RS09225 IPR000249 Microcompartment protein, bacteria DOE58_RS09235 IPR009051 Alpha-helical ferredoxin DOE58_RS09235 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS09235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS09235 IPR026902 RnfC Barrel sandwich hybrid domain DOE58_RS09235 IPR019554 Soluble ligand binding domain DOE58_RS09235 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE58_RS09235 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE58_RS09235 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DOE58_RS09240 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS09240 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS09240 IPR039697 Iron-type alcohol dehydrogenase-like DOE58_RS09245 IPR015590 Aldehyde dehydrogenase domain DOE58_RS09245 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS09245 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS09245 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related DOE58_RS09245 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS09250 IPR016030 Cobalamin adenosyltransferase-like DOE58_RS09250 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type DOE58_RS09250 IPR036451 Cobalamin adenosyltransferase-like superfamily DOE58_RS09255 IPR036677 EutN/Ccml superfamily DOE58_RS09255 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml DOE58_RS09265 IPR008300 Phosphate propanoyltransferase DOE58_RS09270 IPR020808 Bacterial microcompartments protein, conserved site DOE58_RS09270 IPR037233 CcmK-like superfamily DOE58_RS09270 IPR000249 Microcompartment protein, bacteria DOE58_RS09275 IPR037233 CcmK-like superfamily DOE58_RS09275 IPR000249 Microcompartment protein, bacteria DOE58_RS09275 IPR020808 Bacterial microcompartments protein, conserved site DOE58_RS09285 IPR030994 Diol dehydratase reactivase ATPase-like domain DOE58_RS09285 IPR040916 DD-reactivating factor swiveling domain DOE58_RS09285 IPR009191 Diol dehydratase-reactivating factor alpha subunit DOE58_RS09285 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily DOE58_RS09290 IPR003207 Propanediol/glycerol dehydratase, small subunit DOE58_RS09290 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily DOE58_RS09295 IPR010254 B12-dependent dehydratases, beta subunit DOE58_RS09295 IPR025541 Propanediol/glycerol dehydratase, medium subunit DOE58_RS09295 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor DOE58_RS09300 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic DOE58_RS09300 IPR036999 Diol/glycerol dehydratase, large subunit superfamily DOE58_RS09300 IPR003206 Diol/glycerol dehydratase, large subunit DOE58_RS09305 IPR030984 Microcompartment protein PduB DOE58_RS09305 IPR000249 Microcompartment protein, bacteria DOE58_RS09305 IPR037233 CcmK-like superfamily DOE58_RS09305 IPR009193 Polyhedral organelle shell protein, EutL/PduB type DOE58_RS09310 IPR000249 Microcompartment protein, bacteria DOE58_RS09310 IPR037233 CcmK-like superfamily DOE58_RS09310 IPR020808 Bacterial microcompartments protein, conserved site DOE58_RS09315 IPR022357 Major intrinsic protein, conserved site DOE58_RS09315 IPR023271 Aquaporin-like DOE58_RS09315 IPR000425 Major intrinsic protein DOE58_RS09320 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS09320 IPR018771 PocR domain DOE58_RS09320 IPR018062 HTH domain AraC-type, conserved site DOE58_RS09320 IPR009057 Homeobox-like domain superfamily DOE58_RS09320 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS09325 IPR011698 CobB/CobQ-like glutamine amidotransferase DOE58_RS09325 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA DOE58_RS09325 IPR029062 Class I glutamine amidotransferase-like DOE58_RS09325 IPR017929 CobB/CobQ glutamine amidotransferase DOE58_RS09325 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE58_RS09325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09330 IPR004485 Cobalamin biosynthesis CobD/CbiB DOE58_RS09335 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily DOE58_RS09335 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC DOE58_RS09340 IPR036074 CbiD superfamily DOE58_RS09340 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD DOE58_RS09345 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS09345 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase DOE58_RS09345 IPR000878 Tetrapyrrole methylase DOE58_RS09345 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS09350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS09350 IPR007848 Methyltransferase small domain DOE58_RS09350 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit DOE58_RS09355 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE58_RS09355 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase DOE58_RS09355 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS09355 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS09355 IPR000878 Tetrapyrrole methylase DOE58_RS09355 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE58_RS09360 IPR002750 CobE/GbiG C-terminal domain DOE58_RS09360 IPR021745 Cobalamin biosynthesis central region DOE58_RS09360 IPR036518 CobE/GbiG C-terminal domain superfamily DOE58_RS09360 IPR021744 Cobalamin synthesis G, N-terminal DOE58_RS09360 IPR038029 GbiG N-terminal domain superfamily DOE58_RS09365 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE58_RS09365 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS09365 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS09365 IPR000878 Tetrapyrrole methylase DOE58_RS09365 IPR006363 Precorrin-3B C17-methyltransferase domain DOE58_RS09370 IPR003723 Precorrin-6x reductase DOE58_RS09375 IPR010388 Anaerobic cobalt chelatase DOE58_RS09380 IPR012382 Precorrin-2 C(20)-methyltransferase DOE58_RS09380 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DOE58_RS09380 IPR006364 Precorrin-2 C(20)-methyltransferase domain DOE58_RS09380 IPR000878 Tetrapyrrole methylase DOE58_RS09380 IPR014776 Tetrapyrrole methylase, subdomain 2 DOE58_RS09380 IPR014777 Tetrapyrrole methylase, subdomain 1 DOE58_RS09380 IPR035996 Tetrapyrrole methylase superfamily DOE58_RS09385 IPR002751 Metal transport protein CbiM/NikMN DOE58_RS09385 IPR018024 Cobalamin (vitamin B12) transport protein CbiM DOE58_RS09390 IPR003705 Cobalt transport protein CbiN DOE58_RS09395 IPR012809 Cobalt ECF transporter T component CbiQ DOE58_RS09395 IPR003339 ABC/ECF transporter, transmembrane component DOE58_RS09400 IPR003439 ABC transporter-like DOE58_RS09400 IPR017871 ABC transporter, conserved site DOE58_RS09400 IPR015856 ABC transporter, CbiO/EcfA subunit DOE58_RS09400 IPR005876 Cobalt transport protein ATP-binding subunit DOE58_RS09400 IPR003593 AAA+ ATPase domain DOE58_RS09400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09405 IPR011698 CobB/CobQ-like glutamine amidotransferase DOE58_RS09405 IPR029062 Class I glutamine amidotransferase-like DOE58_RS09405 IPR004459 Cobyric acid synthase CobQ DOE58_RS09405 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 DOE58_RS09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09405 IPR017929 CobB/CobQ glutamine amidotransferase DOE58_RS09410 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase DOE58_RS09410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09415 IPR003805 Adenosylcobinamide-GDP ribazoletransferase DOE58_RS09420 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DOE58_RS09420 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DOE58_RS09420 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily DOE58_RS09420 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DOE58_RS09425 IPR041597 L,D-transpeptidase C-terminal domain DOE58_RS09425 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS09425 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS09435 IPR002528 Multi antimicrobial extrusion protein DOE58_RS09465 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily DOE58_RS09465 IPR011271 AMP nucleosidase DOE58_RS09465 IPR018953 AMP nucleoside phosphorylase, N-terminal DOE58_RS09465 IPR035994 Nucleoside phosphorylase superfamily DOE58_RS09465 IPR000845 Nucleoside phosphorylase domain DOE58_RS09490 IPR042252 MtfA, N-terminal DOE58_RS09490 IPR024079 Metallopeptidase, catalytic domain superfamily DOE58_RS09490 IPR010384 MtfA family DOE58_RS09510 IPR036286 LexA/Signal peptidase-like superfamily DOE58_RS09510 IPR015927 Peptidase S24/S26A/S26B/S26C DOE58_RS09510 IPR006197 Peptidase S24, LexA-like DOE58_RS09510 IPR039418 LexA-like DOE58_RS09515 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOE58_RS09515 IPR017961 DNA polymerase, Y-family, little finger domain DOE58_RS09515 IPR025188 Domain of unknown function DUF4113 DOE58_RS09515 IPR001126 UmuC domain DOE58_RS09520 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS09520 IPR002059 Cold-shock protein, DNA-binding DOE58_RS09520 IPR019844 Cold-shock (CSD) domain DOE58_RS09520 IPR011129 Cold shock domain DOE58_RS09520 IPR012156 Cold shock, CspA DOE58_RS09530 IPR023614 Porin domain superfamily DOE58_RS09530 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS09530 IPR033900 Porin domain, Gram-negative type DOE58_RS09530 IPR001702 Porin, Gram-negative type DOE58_RS09530 IPR001897 Porin, gammaproteobacterial DOE58_RS09540 IPR006674 HD domain DOE58_RS09540 IPR003607 HD/PDEase domain DOE58_RS09545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS09545 IPR018117 DNA methylase, C-5 cytosine-specific, active site DOE58_RS09545 IPR001525 C-5 cytosine methyltransferase DOE58_RS09545 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site DOE58_RS09545 IPR040743 DNA methylase N-terminal domain DOE58_RS09550 IPR011335 Restriction endonuclease type II-like DOE58_RS09550 IPR004603 DNA mismatch endonuclease vsr DOE58_RS09555 IPR000620 EamA domain DOE58_RS09555 IPR004779 Carboxylate/Amino Acid/Amine Transporter DOE58_RS09560 IPR008526 Inner membrane protein YedI DOE58_RS09565 IPR019226 Protein of unknown function DUF2158 DOE58_RS09570 IPR033416 Periplasmic sensor domain CHASE7 DOE58_RS09570 IPR029787 Nucleotide cyclase DOE58_RS09570 IPR000160 GGDEF domain DOE58_RS09575 IPR036412 HAD-like superfamily DOE58_RS09575 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP DOE58_RS09575 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS09575 IPR023214 HAD superfamily DOE58_RS09575 IPR012815 Mannosyl-3-phosphoglycerate phosphatase DOE58_RS09580 IPR019669 Uncharacterised bacterial stress protein YodD DOE58_RS09585 IPR019717 Dextransucrase DSRB DOE58_RS09590 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS09590 IPR030866 Transcriptional regulatory protein RcsA DOE58_RS09590 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS09590 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS09595 IPR006303 Flagellar biosynthesis protein FliR DOE58_RS09595 IPR002010 Type III secretion system inner membrane R protein DOE58_RS09600 IPR002191 Bacterial export protein family 3 DOE58_RS09600 IPR006305 Flagellar biosynthesis protein FliQ DOE58_RS09605 IPR005837 Flagellar transport protein FliP DOE58_RS09605 IPR005838 Type III secretion system inner membrane P protein DOE58_RS09610 IPR022781 Flagellar biosynthesis protein, FliO DOE58_RS09615 IPR012826 Flagellar motor switch FliN DOE58_RS09615 IPR031576 Flagellar motor switch protein FliN, N-terminal DOE58_RS09615 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOE58_RS09615 IPR036429 SpoA-like superfamily DOE58_RS09615 IPR001543 Surface presentation of antigen (SpoA) DOE58_RS09620 IPR036429 SpoA-like superfamily DOE58_RS09620 IPR028976 CheC-like superfamily DOE58_RS09620 IPR001543 Surface presentation of antigen (SpoA) DOE58_RS09620 IPR001689 Flagellar motor switch protein FliM DOE58_RS09625 IPR005503 Flagellar basal body-associated protein FliL DOE58_RS09630 IPR021136 Flagellar hook-length control protein-like, C-terminal DOE58_RS09630 IPR038610 FliK-like, C-terminal domain superfamily DOE58_RS09630 IPR001635 Flagellar hook-length control protein FliK DOE58_RS09635 IPR018006 Flagellar FliJ, proteobacteria DOE58_RS09635 IPR012823 Flagellar export FliJ DOE58_RS09640 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE58_RS09640 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS09640 IPR032463 ATPase, type III secretion system, FliI DOE58_RS09640 IPR005714 ATPase, type III secretion system, FliI/YscN DOE58_RS09640 IPR020005 Flagellar export ATPase FliI, clade 1 DOE58_RS09640 IPR040627 T3SS EscN ATPase, C-terminal DOE58_RS09640 IPR003593 AAA+ ATPase domain DOE58_RS09640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09645 IPR000563 Flagellar assembly protein FliH DOE58_RS09645 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DOE58_RS09650 IPR000090 Flagellar motor switch protein FliG DOE58_RS09650 IPR023087 Flagellar motor switch protein FliG, C-terminal DOE58_RS09650 IPR011002 Flagellar motor switch protein FliG, alpha-helical DOE58_RS09650 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DOE58_RS09650 IPR032779 Flagellar motor switch protein FliG, middle domain DOE58_RS09655 IPR006182 Secretory protein YscJ/FliF DOE58_RS09655 IPR000067 Flagellar M-ring protein FliF DOE58_RS09655 IPR013556 Flagellar M-ring C-terminal DOE58_RS09660 IPR001624 Flagellar hook-basal body complex protein FliE DOE58_RS09670 IPR036868 TusA-like domain superfamily DOE58_RS09670 IPR001455 TusA-like domain DOE58_RS09675 IPR007272 Sulphur transport domain DOE58_RS09680 IPR025596 YedD-like protein DOE58_RS09680 IPR038624 YedD-like superfamily DOE58_RS09685 IPR013776 Alpha-amylase, thermostable DOE58_RS09685 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS09685 IPR017853 Glycoside hydrolase superfamily DOE58_RS09685 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS09685 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta DOE58_RS09690 IPR008622 Flagellar protein FliT DOE58_RS09695 IPR036584 Flagellar protein FliS superfamily DOE58_RS09695 IPR003713 Flagellar protein FliS DOE58_RS09700 IPR010810 Flagellin hook, IN motif DOE58_RS09700 IPR010809 Flagellar hook-associated protein 2, C-terminal DOE58_RS09700 IPR003481 Flagellar hook-associated protein 2, N-terminal DOE58_RS09700 IPR040026 Flagellar hook-associated protein 2 DOE58_RS09705 IPR001029 Flagellin, D0/D1 domain DOE58_RS09705 IPR014981 Flagellin D3 DOE58_RS09705 IPR001492 Flagellin DOE58_RS09715 IPR014284 RNA polymerase sigma-70 like domain DOE58_RS09715 IPR000943 RNA polymerase sigma-70 DOE58_RS09715 IPR007630 RNA polymerase sigma-70 region 4 DOE58_RS09715 IPR012845 RNA polymerase sigma factor, FliA/WhiG DOE58_RS09715 IPR013325 RNA polymerase sigma factor, region 2 DOE58_RS09715 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE58_RS09715 IPR028617 RNA polymerase sigma factor FliA DOE58_RS09715 IPR007624 RNA polymerase sigma-70 region 3 DOE58_RS09715 IPR007627 RNA polymerase sigma-70 region 2 DOE58_RS09720 IPR022523 Flagellar regulator, FliZ DOE58_RS09720 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS09725 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS09725 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS09725 IPR001320 Ionotropic glutamate receptor DOE58_RS09730 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS09730 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS09730 IPR023702 D-cysteine desulphhydrase, bacterial DOE58_RS09730 IPR005966 D-cysteine desulfhydrase DOE58_RS09730 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DOE58_RS09735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS09735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS09735 IPR035906 MetI-like superfamily DOE58_RS09740 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS09740 IPR003593 AAA+ ATPase domain DOE58_RS09740 IPR017871 ABC transporter, conserved site DOE58_RS09740 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS09740 IPR003439 ABC transporter-like DOE58_RS09745 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS09745 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS09745 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DOE58_RS09745 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily DOE58_RS09745 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS09760 IPR011006 CheY-like superfamily DOE58_RS09760 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS09760 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS09760 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS09765 IPR036876 UVR domain superfamily DOE58_RS09765 IPR004791 UvrABC system, subunit C DOE58_RS09765 IPR001162 UvrC family homology region DOE58_RS09765 IPR038476 UvrC homology region 2 superfamily DOE58_RS09765 IPR010994 RuvA domain 2-like DOE58_RS09765 IPR001943 UVR domain DOE58_RS09765 IPR000305 GIY-YIG endonuclease DOE58_RS09765 IPR035901 GIY-YIG endonuclease superfamily DOE58_RS09765 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE58_RS09770 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial DOE58_RS09770 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DOE58_RS09770 IPR000462 CDP-alcohol phosphatidyltransferase DOE58_RS09805 IPR036255 YgfB-like superfamily DOE58_RS09805 IPR011978 Uncharacterised protein family UPF0149 DOE58_RS09805 IPR004027 SEC-C motif DOE58_RS09810 IPR013059 Tryptophan/tyrosine transporter DOE58_RS09810 IPR013061 Tryptophan/tryrosine permease, conserved site DOE58_RS09810 IPR018227 Amino acid/polyamine transporter 2 DOE58_RS09815 IPR019620 Putative metal-binding protein DOE58_RS09840 IPR025731 YecR-like lipoprotein DOE58_RS09850 IPR008331 Ferritin/DPS protein domain DOE58_RS09850 IPR041719 Ferritin, prokaryotic-type DOE58_RS09850 IPR012347 Ferritin-like DOE58_RS09850 IPR009040 Ferritin-like diiron domain DOE58_RS09850 IPR009078 Ferritin-like superfamily DOE58_RS09850 IPR001519 Ferritin DOE58_RS09865 IPR003337 Trehalose-phosphatase DOE58_RS09865 IPR023214 HAD superfamily DOE58_RS09865 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS09865 IPR036412 HAD-like superfamily DOE58_RS09870 IPR001830 Glycosyl transferase, family 20 DOE58_RS09870 IPR012766 Alpha,alpha-trehalose-phosphate synthase DOE58_RS09875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS09875 IPR006015 Universal stress protein A family DOE58_RS09875 IPR006016 UspA DOE58_RS09885 IPR036194 Flagellar transcriptional activator FlhD superfamily DOE58_RS09885 IPR023559 Flagellar transcriptional activator FlhD DOE58_RS09890 IPR007944 Flagellar transcriptional activator FlhC DOE58_RS09895 IPR002898 MotA/TolQ/ExbB proton channel DOE58_RS09895 IPR000540 Flagellar motor protein MotA, conserved site DOE58_RS09895 IPR022522 Flagellar motor stator, MotA DOE58_RS09900 IPR006665 OmpA-like domain DOE58_RS09900 IPR025713 Motility protein B, N-terminal domain DOE58_RS09900 IPR036737 OmpA-like domain superfamily DOE58_RS09905 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS09905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS09905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS09905 IPR035891 CheY-binding domain of CheA DOE58_RS09905 IPR036641 HPT domain superfamily DOE58_RS09905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS09905 IPR005467 Histidine kinase domain DOE58_RS09905 IPR015162 CheY binding DOE58_RS09905 IPR002545 CheW-like domain DOE58_RS09905 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS09905 IPR036061 CheW-like domain superfamily DOE58_RS09905 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily DOE58_RS09905 IPR004105 Histidine kinase CheA-like, homodimeric domain DOE58_RS09910 IPR036061 CheW-like domain superfamily DOE58_RS09910 IPR002545 CheW-like domain DOE58_RS09910 IPR039315 Chemotaxis protein CheW DOE58_RS09915 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS09915 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS09915 IPR003660 HAMP domain DOE58_RS09915 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS09915 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS09915 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS09920 IPR000780 MCP methyltransferase, CheR-type DOE58_RS09920 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DOE58_RS09920 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOE58_RS09920 IPR026024 Chemotaxis protein methyltransferase CheR DOE58_RS09920 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOE58_RS09920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS09925 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DOE58_RS09925 IPR035909 Methylesterase CheB, C-terminal DOE58_RS09925 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS09925 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DOE58_RS09925 IPR011006 CheY-like superfamily DOE58_RS09930 IPR011006 CheY-like superfamily DOE58_RS09930 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS09935 IPR007439 Chemotaxis phosphatase, CheZ DOE58_RS09940 IPR006135 Type III secretion system substrate exporter DOE58_RS09940 IPR006136 Flagellar biosynthetic protein FlhB DOE58_RS09940 IPR029025 Type III secretion system substrate exporter, C-terminal DOE58_RS09945 IPR001712 Type III secretion system FHIPEP DOE58_RS09945 IPR006301 Flagellar biosynthesis protein FlhA DOE58_RS09945 IPR025505 FHIPEP conserved site DOE58_RS09945 IPR042196 FHIPEP, domain 4 DOE58_RS09945 IPR042194 FHIPEP, domain 1 DOE58_RS09945 IPR042193 FHIPEP, domain 3 DOE58_RS09950 IPR009420 Flagellar protein FlhE DOE58_RS09955 IPR010905 Glycosyl hydrolase, family 88 DOE58_RS09955 IPR012341 Six-hairpin glycosidase-like superfamily DOE58_RS09955 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS09960 IPR017790 Penicillin-binding protein 2 DOE58_RS09960 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS09960 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE58_RS09960 IPR005311 Penicillin-binding protein, dimerisation domain DOE58_RS09960 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS09965 IPR001278 Arginine-tRNA ligase DOE58_RS09965 IPR005148 Arginyl tRNA synthetase N-terminal domain DOE58_RS09965 IPR008909 DALR anticodon binding DOE58_RS09965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS09965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS09965 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily DOE58_RS09965 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS09965 IPR035684 Arginyl-tRNA synthetase, catalytic core domain DOE58_RS09970 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE58_RS09970 IPR010393 Protein of unknown function DUF991 DOE58_RS09975 IPR036822 Copper homeostasis (CutC) domain superfamily DOE58_RS09975 IPR023648 Copper homeostasis CutC domain DOE58_RS09975 IPR005627 Copper homeostasis protein CutC DOE58_RS09985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS09985 IPR027555 tRNA (mo5U34)-methyltransferase-like DOE58_RS09985 IPR010017 tRNA U34 carboxymethyltransferase DOE58_RS09990 IPR005271 Carboxy-S-adenosyl-L-methionine synthase DOE58_RS09990 IPR041698 Methyltransferase domain 25 DOE58_RS09990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS09995 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DOE58_RS09995 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DOE58_RS10000 IPR036520 UPF0759 superfamily DOE58_RS10000 IPR002763 Protein of unknown function DUF72 DOE58_RS10005 IPR036380 Isochorismatase-like superfamily DOE58_RS10005 IPR000868 Isochorismatase-like DOE58_RS10010 IPR004115 GAD-like domain superfamily DOE58_RS10010 IPR029351 GAD domain DOE58_RS10010 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS10010 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE58_RS10010 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS10010 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE58_RS10010 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOE58_RS10010 IPR004524 Aspartate-tRNA ligase, type 1 DOE58_RS10015 IPR003564 Dihydroneopterin triphosphate diphosphatase DOE58_RS10015 IPR000086 NUDIX hydrolase domain DOE58_RS10015 IPR020084 NUDIX hydrolase, conserved site DOE58_RS10015 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS10020 IPR002876 Transcriptional regulator TACO1-like DOE58_RS10020 IPR029072 YebC-like DOE58_RS10020 IPR026564 Transcriptional regulator TACO1-like, domain 3 DOE58_RS10020 IPR017856 Integrase-like, N-terminal DOE58_RS10025 IPR002176 Crossover junction endodeoxyribonuclease RuvC DOE58_RS10025 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site DOE58_RS10025 IPR036397 Ribonuclease H superfamily DOE58_RS10025 IPR012337 Ribonuclease H-like superfamily DOE58_RS10030 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DOE58_RS10030 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS10040 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE58_RS10040 IPR011114 Holliday junction DNA helicase RuvA, C-terminal DOE58_RS10040 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS10040 IPR000085 Bacterial DNA recombination protein RuvA DOE58_RS10040 IPR010994 RuvA domain 2-like DOE58_RS10040 IPR036267 RuvA, C-terminal domain superfamily DOE58_RS10040 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DOE58_RS10045 IPR003593 AAA+ ATPase domain DOE58_RS10045 IPR041445 RuvB, AAA lid domain DOE58_RS10045 IPR004605 DNA helicase, Holliday junction RuvB-type DOE58_RS10045 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10045 IPR008824 RuvB-like P-loop domain DOE58_RS10045 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS10045 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS10045 IPR008823 RuvB C-terminal winged helix domain DOE58_RS10050 IPR001626 ABC transporter, TroCD-like DOE58_RS10050 IPR037294 ABC transporter, BtuC-like DOE58_RS10055 IPR017882 Zinc import ATP-binding protein ZnuC DOE58_RS10055 IPR003593 AAA+ ATPase domain DOE58_RS10055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10055 IPR003439 ABC transporter-like DOE58_RS10060 IPR006128 Adhesion lipoprotein DOE58_RS10060 IPR035520 High-affinity zinc uptake system protein ZnuA DOE58_RS10060 IPR006127 Periplasmic solute binding protein, ZnuA-like DOE58_RS10065 IPR016047 Peptidase M23 DOE58_RS10065 IPR013731 Opacity-associated protein A, N-terminal DOE58_RS10065 IPR011055 Duplicated hybrid motif DOE58_RS10065 IPR018392 LysM domain DOE58_RS10075 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE58_RS10075 IPR011921 Lipid A biosynthesis myristoyltransferase DOE58_RS10080 IPR015806 Pyruvate kinase, insert domain superfamily DOE58_RS10080 IPR036918 Pyruvate kinase, C-terminal domain superfamily DOE58_RS10080 IPR015795 Pyruvate kinase, C-terminal DOE58_RS10080 IPR015793 Pyruvate kinase, barrel DOE58_RS10080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS10080 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS10080 IPR001697 Pyruvate kinase DOE58_RS10080 IPR018209 Pyruvate kinase, active site DOE58_RS10080 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE58_RS10085 IPR035472 RpiR-like, SIS domain DOE58_RS10085 IPR009057 Homeobox-like domain superfamily DOE58_RS10085 IPR000281 Helix-turn-helix protein RpiR DOE58_RS10085 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS10085 IPR001347 Sugar isomerase (SIS) DOE58_RS10095 IPR001282 Glucose-6-phosphate dehydrogenase DOE58_RS10095 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DOE58_RS10095 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DOE58_RS10095 IPR019796 Glucose-6-phosphate dehydrogenase, active site DOE58_RS10095 IPR036291 NAD(P)-binding domain superfamily DOE58_RS10100 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DOE58_RS10100 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DOE58_RS10100 IPR037237 IlvD/EDD, N-terminal domain DOE58_RS10100 IPR042096 Dihydroxy-acid dehydratase, C-terminal DOE58_RS10100 IPR004786 6-phosphogluconate dehydratase DOE58_RS10105 IPR013785 Aldolase-type TIM barrel DOE58_RS10105 IPR031337 KDPG/KHG aldolase, active site 1 DOE58_RS10105 IPR000887 KDPG/KHG aldolase DOE58_RS10105 IPR031338 KDPG/KHG aldolase, active site 2 DOE58_RS10110 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS10110 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS10110 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOE58_RS10110 IPR011761 ATP-grasp fold DOE58_RS10110 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DOE58_RS10110 IPR011054 Rudiment single hybrid motif DOE58_RS10115 IPR009813 Uncharacterised protein family YebG DOE58_RS10115 IPR038627 YebG-like superfamily DOE58_RS10120 IPR038703 YebF/Cmi superfamily DOE58_RS10120 IPR025603 YebF/Colicin-M immunity protein DOE58_RS10120 IPR020236 Uncharacterised protein family YebF DOE58_RS10125 IPR029024 TerB-like DOE58_RS10125 IPR007486 Inner membrane protein YebE DOE58_RS10130 IPR002471 Peptidase S9, serine active site DOE58_RS10130 IPR002470 Peptidase S9A, prolyl oligopeptidase DOE58_RS10130 IPR029058 Alpha/Beta hydrolase fold DOE58_RS10130 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOE58_RS10130 IPR023302 Peptidase S9A, N-terminal domain DOE58_RS10135 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE58_RS10135 IPR012337 Ribonuclease H-like superfamily DOE58_RS10135 IPR036397 Ribonuclease H superfamily DOE58_RS10140 IPR036526 Carbon-nitrogen hydrolase superfamily DOE58_RS10140 IPR003010 Carbon-nitrogen hydrolase DOE58_RS10145 IPR036745 DNA polymerase III-theta superfamily DOE58_RS10145 IPR009052 DNA polymerase III-theta, bacterial DOE58_RS10150 IPR014756 Immunoglobulin E-set DOE58_RS10150 IPR007348 CopC domain DOE58_RS10150 IPR032694 Copper transport protein C/D DOE58_RS10155 IPR008457 Copper resistance protein D DOE58_RS10155 IPR032694 Copper transport protein C/D DOE58_RS10160 IPR019648 Protein of unknown function DUF2511 DOE58_RS10180 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE58_RS10245 IPR013515 Phytochrome, central region DOE58_RS10245 IPR001294 Phytochrome DOE58_RS10245 IPR016132 Phytochrome chromophore attachment domain DOE58_RS10245 IPR029787 Nucleotide cyclase DOE58_RS10245 IPR029016 GAF-like domain superfamily DOE58_RS10245 IPR000160 GGDEF domain DOE58_RS10245 IPR003018 GAF domain DOE58_RS10245 IPR035919 EAL domain superfamily DOE58_RS10245 IPR001633 EAL domain DOE58_RS10250 IPR036527 SCP2 sterol-binding domain superfamily DOE58_RS10250 IPR029228 Alkyl sulfatase dimerisation domain DOE58_RS10250 IPR029229 Alkyl sulfatase, C-terminal DOE58_RS10250 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily DOE58_RS10250 IPR001279 Metallo-beta-lactamase DOE58_RS10250 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS10275 IPR000620 EamA domain DOE58_RS10305 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE58_RS10310 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS10310 IPR000182 GNAT domain DOE58_RS10320 IPR009833 Uncharacterised protein DUF1398 DOE58_RS10320 IPR036696 YdfO-like superfamily DOE58_RS10335 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase DOE58_RS10335 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS10335 IPR029052 Metallo-dependent phosphatase-like DOE58_RS10340 IPR009954 Protein of unknown function DUF1482 DOE58_RS10345 IPR009950 Protein of unknown function DUF1480 DOE58_RS10350 IPR023267 RNA (C5-cytosine) methyltransferase DOE58_RS10350 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DOE58_RS10350 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal DOE58_RS10350 IPR023545 rRNA small subunit methyltransferase F DOE58_RS10350 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DOE58_RS10350 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain DOE58_RS10350 IPR011023 Nop2p DOE58_RS10350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS10355 IPR003399 Mce/MlaD DOE58_RS10360 IPR007498 Intermembrane transport protein PqiA-like DOE58_RS10360 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DOE58_RS10360 IPR011031 Multihaem cytochrome DOE58_RS10365 IPR000614 Free Met sulfoxide reductase conserved site DOE58_RS10365 IPR029016 GAF-like domain superfamily DOE58_RS10365 IPR003018 GAF domain DOE58_RS10370 IPR035236 RNA chaperone ProQ, C-terminal DOE58_RS10370 IPR036442 ProQ/FinO domain superfamily DOE58_RS10370 IPR016103 ProQ/FinO domain DOE58_RS10370 IPR023529 RNA chaperone ProQ DOE58_RS10375 IPR040573 Tail specific protease, N-terminal domain DOE58_RS10375 IPR001478 PDZ domain DOE58_RS10375 IPR004447 C-terminal-processing peptidase S41A DOE58_RS10375 IPR036034 PDZ superfamily DOE58_RS10375 IPR005151 Tail specific protease DOE58_RS10375 IPR020992 Tail specific protease, C-terminal DOE58_RS10375 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS10380 IPR022919 Peptidase M48, protease HtpX, putative DOE58_RS10380 IPR001915 Peptidase M48 DOE58_RS10385 IPR011701 Major facilitator superfamily DOE58_RS10385 IPR020846 Major facilitator superfamily domain DOE58_RS10385 IPR036259 MFS transporter superfamily DOE58_RS10390 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS10390 IPR029016 GAF-like domain superfamily DOE58_RS10390 IPR014757 Transcription regulator IclR, C-terminal DOE58_RS10390 IPR005471 Transcription regulator IclR, N-terminal DOE58_RS10390 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS10390 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS10395 IPR025611 YobH-like protein DOE58_RS10400 IPR020907 PhoP/PhoQ regulator MgrB DOE58_RS10405 IPR025594 YebO-like protein DOE58_RS10410 IPR019672 Protein of unknown function DUF2627 DOE58_RS10415 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS10415 IPR002059 Cold-shock protein, DNA-binding DOE58_RS10415 IPR019844 Cold-shock (CSD) domain DOE58_RS10415 IPR012156 Cold shock, CspA DOE58_RS10415 IPR011129 Cold shock domain DOE58_RS10420 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DOE58_RS10420 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS10420 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE58_RS10420 IPR005311 Penicillin-binding protein, dimerisation domain DOE58_RS10420 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS10425 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted DOE58_RS10425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS10425 IPR025714 Methyltransferase domain DOE58_RS10430 IPR003810 Putative manganese efflux pump DOE58_RS10430 IPR022929 Putative manganese efflux pump MntP DOE58_RS10440 IPR009328 Protein of unknown function DUF986 DOE58_RS10445 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component DOE58_RS10450 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit DOE58_RS10455 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily DOE58_RS10455 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE58_RS10455 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE58_RS10455 IPR004720 Phosphotransferase system, sorbose subfamily IIB component DOE58_RS10455 IPR004701 Phosphotransferase system, mannose-type IIA component DOE58_RS10455 IPR013789 Phosphotransferase system, mannose family IIA component DOE58_RS10455 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup DOE58_RS10465 IPR000644 CBS domain DOE58_RS10465 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS10465 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS10465 IPR005170 Transporter-associated domain DOE58_RS10465 IPR005496 Integral membrane protein TerC DOE58_RS10470 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE58_RS10470 IPR001633 EAL domain DOE58_RS10470 IPR035919 EAL domain superfamily DOE58_RS10475 IPR005131 Serine dehydratase beta chain DOE58_RS10475 IPR029009 Allosteric substrate binding domain superfamily DOE58_RS10475 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DOE58_RS10475 IPR005130 Serine dehydratase-like, alpha subunit DOE58_RS10480 IPR000086 NUDIX hydrolase domain DOE58_RS10480 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS10480 IPR000059 NUDIX hydrolase, NudL, conserved site DOE58_RS10480 IPR023735 Uncharacterised nudix hydrolase NudL DOE58_RS10485 IPR005802 Aminodeoxychorismate synthase, component I DOE58_RS10485 IPR019999 Anthranilate synthase component I-like DOE58_RS10485 IPR006805 Anthranilate synthase component I, N-terminal DOE58_RS10485 IPR015890 Chorismate-utilising enzyme, C-terminal DOE58_RS10485 IPR005801 ADC synthase DOE58_RS10490 IPR005371 Uncharacterised protein family UPF0181 DOE58_RS10495 IPR019897 RidA, conserved site DOE58_RS10495 IPR035959 RutC-like superfamily DOE58_RS10495 IPR035709 RutC family, YoaB-like DOE58_RS10495 IPR006175 YjgF/YER057c/UK114 family DOE58_RS10500 IPR006935 Helicase/UvrB, N-terminal DOE58_RS10500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10500 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS10500 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOE58_RS10500 IPR006555 ATP-dependent helicase, C-terminal DOE58_RS10505 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB DOE58_RS10505 IPR000905 Gcp-like domain DOE58_RS10510 IPR004658 Outer membrane lipoprotein Slp DOE58_RS10520 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS10520 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS10520 IPR000873 AMP-dependent synthetase/ligase DOE58_RS10520 IPR020845 AMP-binding, conserved site DOE58_RS10525 IPR002562 3'-5' exonuclease domain DOE58_RS10525 IPR010997 HRDC-like superfamily DOE58_RS10525 IPR002121 HRDC domain DOE58_RS10525 IPR006292 Ribonuclease D DOE58_RS10525 IPR012337 Ribonuclease H-like superfamily DOE58_RS10525 IPR036397 Ribonuclease H superfamily DOE58_RS10530 IPR036707 Cell division topological specificity factor MinE superfamily DOE58_RS10530 IPR005527 Cell division topological specificity factor MinE DOE58_RS10535 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE58_RS10535 IPR010223 ATP binding protein MinD, bacterial-type DOE58_RS10535 IPR025501 ATP binding protein MinD DOE58_RS10535 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10540 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily DOE58_RS10540 IPR005526 Septum formation inhibitor MinC, C-terminal DOE58_RS10540 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily DOE58_RS10540 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal DOE58_RS10540 IPR013033 Septum formation inhibitor MinC DOE58_RS10540 IPR007874 Septum formation inhibitor MinC, N-terminal DOE58_RS10545 IPR038068 YcgL-like superfamily DOE58_RS10545 IPR027354 YcgL domain DOE58_RS10550 IPR011234 Fumarylacetoacetase-like, C-terminal DOE58_RS10550 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE58_RS10555 IPR008228 Uncharacterised conserved protein UCP006173 DOE58_RS10555 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE58_RS10565 IPR012563 Gns DOE58_RS10575 IPR022920 Disulphide bond formation protein DsbB DOE58_RS10575 IPR003752 Disulphide bond formation protein DsbB/BdbC DOE58_RS10575 IPR023380 DsbB-like superfamily DOE58_RS10580 IPR004671 Na+/H+ antiporter NhaB DOE58_RS10585 IPR028374 FadR, C-terminal domain DOE58_RS10585 IPR014178 Fatty acid response transcription factor FadR DOE58_RS10585 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS10585 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS10585 IPR000524 Transcription regulator HTH, GntR DOE58_RS10585 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS10590 IPR007390 Sporulation stage V, protein R DOE58_RS10595 IPR023080 D-amino acid dehydrogenase DadA DOE58_RS10595 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS10595 IPR006076 FAD dependent oxidoreductase DOE58_RS10600 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DOE58_RS10600 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE58_RS10600 IPR000821 Alanine racemase DOE58_RS10600 IPR029066 PLP-binding barrel DOE58_RS10600 IPR001608 Alanine racemase, N-terminal DOE58_RS10600 IPR011079 Alanine racemase, C-terminal DOE58_RS10605 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS10605 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS10605 IPR006153 Cation/H+ exchanger DOE58_RS10605 IPR038770 Sodium/solute symporter superfamily DOE58_RS10605 IPR030151 K(+)/H(+) antiporter NhaP DOE58_RS10605 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE58_RS10605 IPR023729 K(+)/H(+) antiporter NhaP2 DOE58_RS10605 IPR006037 Regulator of K+ conductance, C-terminal DOE58_RS10605 IPR005170 Transporter-associated domain DOE58_RS10610 IPR003507 Peptidase family S66 DOE58_RS10610 IPR040921 LD-carboxypeptidase, C-terminal DOE58_RS10610 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DOE58_RS10610 IPR040449 LD-carboxypeptidase, N-terminal DOE58_RS10610 IPR029062 Class I glutamine amidotransferase-like DOE58_RS10610 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE58_RS10615 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A DOE58_RS10615 IPR023346 Lysozyme-like domain superfamily DOE58_RS10615 IPR008258 Transglycosylase SLT domain 1 DOE58_RS10615 IPR000189 Prokaryotic transglycosylase, active site DOE58_RS10620 IPR009875 PilZ domain DOE58_RS10620 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DOE58_RS10620 IPR012349 FMN-binding split barrel DOE58_RS10620 IPR023787 Type III secretion system flagellar brake protein YcgR DOE58_RS10625 IPR007341 Transglycosylase-associated protein DOE58_RS10630 IPR023720 Trehalase, periplasmic DOE58_RS10630 IPR018232 Glycoside hydrolase, family 37, conserved site DOE58_RS10630 IPR001661 Glycoside hydrolase, family 37 DOE58_RS10630 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS10630 IPR012341 Six-hairpin glycosidase-like superfamily DOE58_RS10635 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DOE58_RS10635 IPR036291 NAD(P)-binding domain superfamily DOE58_RS10635 IPR014362 Glutamate dehydrogenase DOE58_RS10635 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DOE58_RS10635 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DOE58_RS10635 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DOE58_RS10635 IPR033524 Leu/Phe/Val dehydrogenases active site DOE58_RS10640 IPR012994 Membrane bound YbgT-like DOE58_RS10645 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE58_RS10650 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE58_RS10655 IPR006894 HupH hydrogenase expression protein, C-terminal DOE58_RS10655 IPR038527 HupH, C-terminal domain superfamily DOE58_RS10660 IPR036249 Thioredoxin-like superfamily DOE58_RS10660 IPR010893 [NiFe]-hydrogenase maturation factor HyaE DOE58_RS10665 IPR000671 Peptidase A31 family DOE58_RS10665 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE58_RS10665 IPR023430 Peptidase HybD-like domain superfamily DOE58_RS10670 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS10670 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit DOE58_RS10670 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS10675 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE58_RS10675 IPR001501 Nickel-dependent hydrogenase, large subunit DOE58_RS10675 IPR029014 [NiFe]-hydrogenase, large subunit DOE58_RS10680 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE58_RS10680 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS10680 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS10680 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE58_RS10680 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE58_RS10680 IPR001821 [NiFe]-hydrogenase, small subunit DOE58_RS10680 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE58_RS10690 IPR013029 YchF, C-terminal domain DOE58_RS10690 IPR012676 TGS-like DOE58_RS10690 IPR041706 YchF, N-terminal DOE58_RS10690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10690 IPR004095 TGS DOE58_RS10690 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 DOE58_RS10690 IPR012675 Beta-grasp domain superfamily DOE58_RS10690 IPR031167 OBG-type guanine nucleotide-binding (G) domain DOE58_RS10690 IPR006073 GTP binding domain DOE58_RS10690 IPR023192 TGS-like domain superfamily DOE58_RS10695 IPR001328 Peptidyl-tRNA hydrolase DOE58_RS10695 IPR018171 Peptidyl-tRNA hydrolase, conserved site DOE58_RS10695 IPR036416 Peptidyl-tRNA hydrolase superfamily DOE58_RS10700 IPR019698 Protein of unknown function DUF2583 DOE58_RS10705 IPR036513 STAS domain superfamily DOE58_RS10705 IPR002645 STAS domain DOE58_RS10705 IPR001902 SLC26A/SulP transporter DOE58_RS10705 IPR011547 SLC26A/SulP transporter domain DOE58_RS10705 IPR018045 Sulphate anion transporter, conserved site DOE58_RS10710 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DOE58_RS10710 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DOE58_RS10710 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DOE58_RS10710 IPR005946 Ribose-phosphate pyrophosphokinase DOE58_RS10710 IPR029057 Phosphoribosyltransferase-like DOE58_RS10710 IPR000836 Phosphoribosyltransferase domain DOE58_RS10715 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DOE58_RS10715 IPR036554 GHMP kinase, C-terminal domain superfamily DOE58_RS10715 IPR013750 GHMP kinase, C-terminal domain DOE58_RS10715 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS10715 IPR006204 GHMP kinase N-terminal domain DOE58_RS10715 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS10720 IPR004565 Outer membrane lipoprotein LolB DOE58_RS10720 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOE58_RS10725 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily DOE58_RS10725 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily DOE58_RS10725 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal DOE58_RS10725 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain DOE58_RS10725 IPR018214 Glutamyl-tRNA reductase, conserved site DOE58_RS10725 IPR036291 NAD(P)-binding domain superfamily DOE58_RS10725 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE58_RS10725 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase DOE58_RS10730 IPR000352 Peptide chain release factor class I DOE58_RS10730 IPR004373 Peptide chain release factor 1 DOE58_RS10730 IPR005139 Peptide chain release factor DOE58_RS10735 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific DOE58_RS10735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS10735 IPR040758 Release factor glutamine methyltransferase, N-terminal domain DOE58_RS10735 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS10735 IPR025714 Methyltransferase domain DOE58_RS10735 IPR004556 Methyltransferase HemK-like DOE58_RS10740 IPR007360 Invasion gene expression up-regulator, SirB DOE58_RS10745 IPR032698 Protein SirB1, N-terminal DOE58_RS10750 IPR013785 Aldolase-type TIM barrel DOE58_RS10750 IPR006218 DAHP synthetase I/KDSA DOE58_RS10750 IPR006269 3-deoxy-8-phosphooctulonate synthase DOE58_RS10755 IPR004713 Calcium/proton exchanger DOE58_RS10755 IPR004837 Sodium/calcium exchanger membrane region DOE58_RS10760 IPR037205 ChaB superfamily DOE58_RS10760 IPR009317 ChaB DOE58_RS10765 IPR003787 Sulphur relay, DsrE/F-like protein DOE58_RS10765 IPR027396 DsrEFH-like DOE58_RS10770 IPR024519 Inverse autotransporter, beta-domain DOE58_RS10770 IPR038177 Inverse autotransporter, beta-domain superfamily DOE58_RS10775 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS10775 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS10775 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS10775 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS10775 IPR011006 CheY-like superfamily DOE58_RS10780 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS10780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS10780 IPR003660 HAMP domain DOE58_RS10780 IPR029095 NarX-like, N-terminal DOE58_RS10780 IPR042295 NarX-like, N-terminal domain superfamily DOE58_RS10780 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DOE58_RS10780 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing DOE58_RS10780 IPR005467 Histidine kinase domain DOE58_RS10790 IPR004737 Nitrate transporter DOE58_RS10790 IPR011701 Major facilitator superfamily DOE58_RS10790 IPR036259 MFS transporter superfamily DOE58_RS10795 IPR028189 Nitrate reductase, alpha subunit, N-terminal DOE58_RS10795 IPR006468 Nitrate reductase, alpha subunit DOE58_RS10795 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS10795 IPR037943 Nitrate reductase alpha subunit-like, MopB domain DOE58_RS10795 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS10795 IPR006656 Molybdopterin oxidoreductase DOE58_RS10795 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS10795 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS10795 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS10800 IPR006547 Nitrate reductase, beta subunit DOE58_RS10800 IPR038262 Nitrate reductase beta, C-terminal domain superfamily DOE58_RS10800 IPR029263 Respiratory nitrate reductase beta, C-terminal DOE58_RS10800 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS10805 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS10805 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 DOE58_RS10805 IPR036411 TorD-like superfamily DOE58_RS10805 IPR003765 Nitrate reductase chaperone, NarJ DOE58_RS10805 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 DOE58_RS10810 IPR036197 NarG-like superfamily DOE58_RS10810 IPR003816 Nitrate reductase, gamma subunit DOE58_RS10810 IPR023234 NarG-like domain DOE58_RS10835 IPR002912 ACT domain DOE58_RS10835 IPR004810 Formyltetrahydrofolate deformylase DOE58_RS10835 IPR036477 Formyl transferase, N-terminal domain superfamily DOE58_RS10835 IPR002376 Formyl transferase, N-terminal DOE58_RS10835 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain DOE58_RS10840 IPR023006 Uncharacterised protein family UPF0225 DOE58_RS10840 IPR004027 SEC-C motif DOE58_RS10840 IPR032710 NTF2-like domain superfamily DOE58_RS10845 IPR001423 Lysophospholipase patatin, conserved site DOE58_RS10845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE58_RS10845 IPR002641 Patatin-like phospholipase domain DOE58_RS10850 IPR011006 CheY-like superfamily DOE58_RS10850 IPR036457 PPM-type phosphatase domain superfamily DOE58_RS10850 IPR028616 Regulator of RpoS DOE58_RS10850 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS10850 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS10855 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DOE58_RS10855 IPR005835 Nucleotidyl transferase domain DOE58_RS10855 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS10860 IPR027444 Histone-like protein H-NS, C-terminal domain DOE58_RS10860 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DOE58_RS10860 IPR027454 Histone-like protein H-NS, N-terminal DOE58_RS10860 IPR001801 Histone-like protein H-NS DOE58_RS10865 IPR001267 Thymidine kinase DOE58_RS10865 IPR020633 Thymidine kinase, conserved site DOE58_RS10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10870 IPR039697 Iron-type alcohol dehydrogenase-like DOE58_RS10870 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS10870 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain DOE58_RS10870 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS10870 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS10870 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS10870 IPR015590 Aldehyde dehydrogenase domain DOE58_RS10870 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase DOE58_RS10870 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS10875 IPR002771 Multiple antibiotic resistance (MarC)-related DOE58_RS10885 IPR023765 Solute-binding protein family 5, conserved site DOE58_RS10885 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS10885 IPR039424 Solute-binding protein family 5 DOE58_RS10885 IPR000914 Solute-binding protein family 5 domain DOE58_RS10890 IPR035906 MetI-like superfamily DOE58_RS10890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS10895 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS10895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS10895 IPR035906 MetI-like superfamily DOE58_RS10900 IPR003439 ABC transporter-like DOE58_RS10900 IPR017871 ABC transporter, conserved site DOE58_RS10900 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS10900 IPR003593 AAA+ ATPase domain DOE58_RS10900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10905 IPR003439 ABC transporter-like DOE58_RS10905 IPR017871 ABC transporter, conserved site DOE58_RS10905 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS10905 IPR003593 AAA+ ATPase domain DOE58_RS10910 IPR028325 Voltage-gated potassium channel DOE58_RS10910 IPR014710 RmlC-like jelly roll fold DOE58_RS10910 IPR018488 Cyclic nucleotide-binding, conserved site DOE58_RS10910 IPR018490 Cyclic nucleotide-binding-like DOE58_RS10910 IPR005821 Ion transport domain DOE58_RS10910 IPR000595 Cyclic nucleotide-binding domain DOE58_RS10915 IPR007376 dsDNA mimic, putative DOE58_RS10915 IPR036763 Putative dsDNA mimic superfamily DOE58_RS10920 IPR022924 Cardiolipin synthase DOE58_RS10920 IPR030840 Cardiolipin synthase A DOE58_RS10920 IPR027379 Cardiolipin synthase N-terminal DOE58_RS10920 IPR025202 Phospholipase D-like domain DOE58_RS10920 IPR001736 Phospholipase D/Transphosphatidylase DOE58_RS10925 IPR005545 YCII-related DOE58_RS10925 IPR011008 Dimeric alpha-beta barrel DOE58_RS10930 IPR006260 TonB/TolA, C-terminal DOE58_RS10930 IPR037682 TonB, C-terminal DOE58_RS10930 IPR003538 Gram-negative bacterial TonB protein DOE58_RS10935 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DOE58_RS10935 IPR006683 Thioesterase domain DOE58_RS10935 IPR029069 HotDog domain superfamily DOE58_RS10935 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DOE58_RS10940 IPR006008 Intracellular septation protein A DOE58_RS10945 IPR009627 Uncharacterised protein family UPF0259 DOE58_RS10950 IPR005358 Putative zinc- or iron-chelating domain containing protein DOE58_RS10955 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS10955 IPR005618 Outer membrane protein, OmpW DOE58_RS10960 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain DOE58_RS10960 IPR027407 Manganese catalase, C-terminal DOE58_RS10960 IPR007760 Manganese catalase DOE58_RS10960 IPR009078 Ferritin-like superfamily DOE58_RS10960 IPR012347 Ferritin-like DOE58_RS10965 IPR010287 Domain of unknown function DUF892 DOE58_RS10965 IPR012347 Ferritin-like DOE58_RS10965 IPR009078 Ferritin-like superfamily DOE58_RS10970 IPR012347 Ferritin-like DOE58_RS10970 IPR010287 Domain of unknown function DUF892 DOE58_RS10970 IPR009078 Ferritin-like superfamily DOE58_RS10975 IPR019626 Stress-induced protein, KGG, repeat DOE58_RS10980 IPR002028 Tryptophan synthase, alpha chain DOE58_RS10980 IPR018204 Tryptophan synthase, alpha chain, active site DOE58_RS10980 IPR011060 Ribulose-phosphate binding barrel DOE58_RS10980 IPR013785 Aldolase-type TIM barrel DOE58_RS10985 IPR006653 Tryptophan synthase, beta chain, conserved site DOE58_RS10985 IPR006654 Tryptophan synthase, beta chain DOE58_RS10985 IPR023026 Tryptophan synthase beta chain/beta chain-like DOE58_RS10985 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS10985 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS10990 IPR001468 Indole-3-glycerol phosphate synthase, conserved site DOE58_RS10990 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) DOE58_RS10990 IPR011060 Ribulose-phosphate binding barrel DOE58_RS10990 IPR013798 Indole-3-glycerol phosphate synthase DOE58_RS10990 IPR013785 Aldolase-type TIM barrel DOE58_RS10995 IPR017926 Glutamine amidotransferase DOE58_RS10995 IPR000312 Glycosyl transferase, family 3 DOE58_RS10995 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE58_RS10995 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE58_RS10995 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE58_RS10995 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DOE58_RS10995 IPR005940 Anthranilate phosphoribosyl transferase DOE58_RS10995 IPR029062 Class I glutamine amidotransferase-like DOE58_RS11000 IPR005801 ADC synthase DOE58_RS11000 IPR019999 Anthranilate synthase component I-like DOE58_RS11000 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial DOE58_RS11000 IPR006805 Anthranilate synthase component I, N-terminal DOE58_RS11000 IPR015890 Chorismate-utilising enzyme, C-terminal DOE58_RS11005 IPR013205 Leader peptide, tryptophan-operon DOE58_RS11010 IPR004013 PHP domain DOE58_RS11010 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE58_RS11010 IPR016195 Polymerase/histidinol phosphatase-like DOE58_RS11015 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE58_RS11015 IPR006070 YrdC-like domain DOE58_RS11020 IPR036986 RNA-binding S4 domain superfamily DOE58_RS11020 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS11020 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS11020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE58_RS11020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE58_RS11020 IPR002942 RNA-binding S4 domain DOE58_RS11025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11025 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DOE58_RS11030 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS11030 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS11030 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11035 IPR002142 Peptidase S49 DOE58_RS11035 IPR013703 Peptidase S49, N-terminal proteobacteria DOE58_RS11035 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS11040 IPR038191 YciN superfamily DOE58_RS11040 IPR019633 Protein of unknown function DUF2498 DOE58_RS11050 IPR034149 DNA topoisomerase 1, TOPRIM domain DOE58_RS11050 IPR000380 DNA topoisomerase, type IA DOE58_RS11050 IPR028612 DNA topoisomerase I, type IA DOE58_RS11050 IPR023405 DNA topoisomerase, type IA, core domain DOE58_RS11050 IPR006171 TOPRIM domain DOE58_RS11050 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE58_RS11050 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE58_RS11050 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DOE58_RS11050 IPR013498 DNA topoisomerase, type IA, zn finger DOE58_RS11050 IPR023406 DNA topoisomerase, type IA, active site DOE58_RS11050 IPR013497 DNA topoisomerase, type IA, central DOE58_RS11050 IPR005733 DNA topoisomerase I, bacterial-type DOE58_RS11050 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type DOE58_RS11050 IPR003601 DNA topoisomerase, type IA, domain 2 DOE58_RS11050 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE58_RS11060 IPR005119 LysR, substrate-binding DOE58_RS11060 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11060 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11060 IPR000847 Transcription regulator HTH, LysR DOE58_RS11080 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE58_RS11080 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE58_RS11080 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOE58_RS11080 IPR036008 Aconitase, iron-sulfur domain DOE58_RS11080 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE58_RS11080 IPR006249 Aconitase/Iron-responsive element-binding protein 2 DOE58_RS11080 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE58_RS11085 IPR032677 GTP cyclohydrolase II DOE58_RS11085 IPR000926 GTP cyclohydrolase II, RibA DOE58_RS11085 IPR036144 RibA-like superfamily DOE58_RS11090 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE58_RS11090 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE58_RS11100 IPR010445 Lipopolysaccharide assembly protein A domain DOE58_RS11100 IPR032906 Lipopolysaccharide assembly protein A DOE58_RS11105 IPR019734 Tetratricopeptide repeat DOE58_RS11105 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS11105 IPR030865 Lipopolysaccharide assembly protein B DOE58_RS11105 IPR041166 LapB, rubredoxin metal binding domain DOE58_RS11105 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS11110 IPR013785 Aldolase-type TIM barrel DOE58_RS11110 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE58_RS11110 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DOE58_RS11110 IPR014732 Orotidine 5'-phosphate decarboxylase DOE58_RS11110 IPR011060 Ribulose-phosphate binding barrel DOE58_RS11115 IPR001950 SUI1 domain DOE58_RS11115 IPR036877 SUI1 domain superfamily DOE58_RS11115 IPR005872 Archaeal/bacterial translation initiation factor SUI1 DOE58_RS11120 IPR008816 Glycine zipper 2TM domain DOE58_RS11125 IPR001034 DeoR-type HTH domain DOE58_RS11125 IPR014036 DeoR C-terminal sensor domain DOE58_RS11125 IPR037171 NagB/RpiA transferase-like DOE58_RS11125 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS11125 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11125 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11130 IPR020887 Uncharacterised protein family UPF0509 DOE58_RS11135 IPR029787 Nucleotide cyclase DOE58_RS11135 IPR000160 GGDEF domain DOE58_RS11135 IPR000014 PAS domain DOE58_RS11135 IPR035919 EAL domain superfamily DOE58_RS11135 IPR001633 EAL domain DOE58_RS11135 IPR035965 PAS domain superfamily DOE58_RS11145 IPR011129 Cold shock domain DOE58_RS11145 IPR040476 RNase II/RNase R, cold shock domain DOE58_RS11145 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS11145 IPR013223 Ribonuclease B, N-terminal OB domain DOE58_RS11145 IPR011804 Ribonuclease II DOE58_RS11145 IPR003029 S1 domain DOE58_RS11145 IPR022966 Ribonuclease II/R, conserved site DOE58_RS11145 IPR004476 Ribonuclease II/ribonuclease R DOE58_RS11145 IPR001900 Ribonuclease II/R DOE58_RS11150 IPR029032 AhpD-like DOE58_RS11155 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11155 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) DOE58_RS11155 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11180 IPR017871 ABC transporter, conserved site DOE58_RS11180 IPR003439 ABC transporter-like DOE58_RS11180 IPR003593 AAA+ ATPase domain DOE58_RS11185 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS11185 IPR003439 ABC transporter-like DOE58_RS11185 IPR003593 AAA+ ATPase domain DOE58_RS11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11190 IPR035906 MetI-like superfamily DOE58_RS11190 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS11190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS11230 IPR006120 Resolvase, HTH domain DOE58_RS11230 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DOE58_RS11230 IPR006119 Resolvase, N-terminal catalytic domain DOE58_RS11230 IPR006118 Recombinase, conserved site DOE58_RS11230 IPR009057 Homeobox-like domain superfamily DOE58_RS11235 IPR035906 MetI-like superfamily DOE58_RS11235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS11240 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS11240 IPR023765 Solute-binding protein family 5, conserved site DOE58_RS11240 IPR039424 Solute-binding protein family 5 DOE58_RS11240 IPR000914 Solute-binding protein family 5 domain DOE58_RS11245 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS11245 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS11245 IPR014317 Transcription activator PspF DOE58_RS11245 IPR003593 AAA+ ATPase domain DOE58_RS11245 IPR009057 Homeobox-like domain superfamily DOE58_RS11245 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS11245 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS11245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11250 IPR007157 PspA/IM30 DOE58_RS11250 IPR014319 Phage shock protein, PspA DOE58_RS11255 IPR009554 Phage shock protein B DOE58_RS11260 IPR007168 Phage shock protein, PspC, N-terminal DOE58_RS11260 IPR014320 Phage shock protein, PspC DOE58_RS11265 IPR014321 Phage shock protein, PspD DOE58_RS11270 IPR001763 Rhodanese-like domain DOE58_RS11270 IPR014323 Phage shock protein, PspE DOE58_RS11270 IPR036873 Rhodanese-like domain superfamily DOE58_RS11275 IPR007413 Protein of unknown function DUF463, YcjX-like protein DOE58_RS11280 IPR021147 Protein of unknown function DUF697 DOE58_RS11280 IPR006507 Uncharacterised protein family UPF0283 DOE58_RS11285 IPR035965 PAS domain superfamily DOE58_RS11285 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS11285 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS11285 IPR000014 PAS domain DOE58_RS11285 IPR003593 AAA+ ATPase domain DOE58_RS11285 IPR002912 ACT domain DOE58_RS11285 IPR009057 Homeobox-like domain superfamily DOE58_RS11285 IPR030828 TyrR family, helix-turn-helix domain DOE58_RS11285 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS11285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11285 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS11290 IPR013740 Redoxin DOE58_RS11290 IPR018219 Thiol peroxidase conserved site DOE58_RS11290 IPR002065 Thiol peroxidase Tpx DOE58_RS11290 IPR013766 Thioredoxin domain DOE58_RS11290 IPR036249 Thioredoxin-like superfamily DOE58_RS11295 IPR029017 Enolase-like, N-terminal DOE58_RS11295 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS11295 IPR029065 Enolase C-terminal domain-like DOE58_RS11295 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS11295 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS11295 IPR034603 Dipeptide epimerase DOE58_RS11295 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS11300 IPR000834 Peptidase M14, carboxypeptidase A DOE58_RS11305 IPR039424 Solute-binding protein family 5 DOE58_RS11305 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS11305 IPR000914 Solute-binding protein family 5 domain DOE58_RS11305 IPR023765 Solute-binding protein family 5, conserved site DOE58_RS11315 IPR000847 Transcription regulator HTH, LysR DOE58_RS11315 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11315 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11315 IPR005119 LysR, substrate-binding DOE58_RS11320 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS11320 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS11320 IPR020471 Aldo/keto reductase DOE58_RS11320 IPR018170 Aldo/keto reductase, conserved site DOE58_RS11325 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11325 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS11325 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS11330 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS11330 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS11330 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS11330 IPR009057 Homeobox-like domain superfamily DOE58_RS11345 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS11345 IPR018062 HTH domain AraC-type, conserved site DOE58_RS11345 IPR029442 GyrI-like small molecule binding domain DOE58_RS11345 IPR011256 Regulatory factor, effector binding domain superfamily DOE58_RS11345 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS11345 IPR009057 Homeobox-like domain superfamily DOE58_RS11370 IPR013740 Redoxin DOE58_RS11370 IPR036249 Thioredoxin-like superfamily DOE58_RS11370 IPR013766 Thioredoxin domain DOE58_RS11370 IPR018219 Thiol peroxidase conserved site DOE58_RS11370 IPR002065 Thiol peroxidase Tpx DOE58_RS11390 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS11390 IPR006685 Mechanosensitive ion channel MscS DOE58_RS11390 IPR010920 LSM domain superfamily DOE58_RS11390 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS11390 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS11390 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE58_RS11395 IPR019685 Protein of unknown function DUF2534 DOE58_RS11400 IPR006016 UspA DOE58_RS11405 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11405 IPR018335 Transcription regulator HTH, Crp-type, conserved site DOE58_RS11405 IPR014710 RmlC-like jelly roll fold DOE58_RS11405 IPR012318 Crp-type HTH domain DOE58_RS11405 IPR000595 Cyclic nucleotide-binding domain DOE58_RS11405 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11405 IPR018490 Cyclic nucleotide-binding-like DOE58_RS11410 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11410 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOE58_RS11410 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DOE58_RS11410 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DOE58_RS11410 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOE58_RS11410 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DOE58_RS11410 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DOE58_RS11415 IPR036063 Smr domain superfamily DOE58_RS11415 IPR002625 Smr domain DOE58_RS11425 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS11425 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS11425 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS11425 IPR003660 HAMP domain DOE58_RS11425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS11425 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS11430 IPR023714 Zinc transport protein ZntB DOE58_RS11430 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DOE58_RS11440 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE58_RS11440 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE58_RS11440 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS11440 IPR011545 DEAD/DEAH box helicase domain DOE58_RS11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11440 IPR028619 ATP-dependent RNA helicase DbpA DOE58_RS11440 IPR001650 Helicase, C-terminal DOE58_RS11440 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOE58_RS11440 IPR014014 RNA helicase, DEAD-box type, Q motif DOE58_RS11445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS11445 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type DOE58_RS11445 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase DOE58_RS11445 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOE58_RS11465 IPR000390 Small multidrug resistance protein family DOE58_RS11470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS11470 IPR006015 Universal stress protein A family DOE58_RS11470 IPR006016 UspA DOE58_RS11480 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS11480 IPR029061 Thiamin diphosphate-binding fold DOE58_RS11480 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain DOE58_RS11480 IPR011895 Pyruvate-flavodoxin oxidoreductase DOE58_RS11480 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal DOE58_RS11480 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain DOE58_RS11480 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily DOE58_RS11480 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DOE58_RS11480 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS11480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS11480 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain DOE58_RS11480 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS11490 IPR005590 Protein of unknown function DUF333 DOE58_RS11495 IPR005184 Domain of unknown function DUF306, Meta/HslJ DOE58_RS11495 IPR038670 HslJ-like superfamily DOE58_RS11500 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE58_RS11500 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11500 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE58_RS11500 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE58_RS11500 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE58_RS11505 IPR021730 Dicarboxylate transport DOE58_RS11510 IPR025985 YnbE-like lipoprotein DOE58_RS11515 IPR008309 Uncharacterised conserved protein UCP025560 DOE58_RS11525 IPR023048 NADH-azoreductase, FMN-dependent DOE58_RS11525 IPR029039 Flavoprotein-like superfamily DOE58_RS11525 IPR003680 Flavodoxin-like fold DOE58_RS11530 IPR010222 RNA helicase HrpA DOE58_RS11530 IPR007502 Helicase-associated domain DOE58_RS11530 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS11530 IPR011545 DEAD/DEAH box helicase domain DOE58_RS11530 IPR003593 AAA+ ATPase domain DOE58_RS11530 IPR011709 Domain of unknown function DUF1605 DOE58_RS11530 IPR001650 Helicase, C-terminal DOE58_RS11530 IPR024590 RNA helicase HrpA, C-terminal DOE58_RS11530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS11535 IPR003848 Domain of unknown function DUF218 DOE58_RS11540 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS11540 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS11545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS11545 IPR013217 Methyltransferase type 12 DOE58_RS11545 IPR016584 Methyltransferase VrtF-like DOE58_RS11555 IPR035906 MetI-like superfamily DOE58_RS11555 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS11555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS11560 IPR003593 AAA+ ATPase domain DOE58_RS11560 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS11560 IPR003439 ABC transporter-like DOE58_RS11560 IPR017871 ABC transporter, conserved site DOE58_RS11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS11565 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS11565 IPR035906 MetI-like superfamily DOE58_RS11565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS11570 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS11570 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS11570 IPR001320 Ionotropic glutamate receptor DOE58_RS11580 IPR036514 SGNH hydrolase superfamily DOE58_RS11580 IPR010637 Sif DOE58_RS11580 IPR001087 GDSL lipase/esterase DOE58_RS11595 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE58_RS11595 IPR003735 Metal-sensitive transcriptional repressor DOE58_RS11600 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS11600 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11600 IPR014183 Alcohol dehydrogenase class III DOE58_RS11600 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS11600 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS11600 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS11600 IPR011032 GroES-like superfamily DOE58_RS11610 IPR003660 HAMP domain DOE58_RS11610 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS11610 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS11610 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS11610 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS11610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS11615 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11615 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11615 IPR000847 Transcription regulator HTH, LysR DOE58_RS11615 IPR005119 LysR, substrate-binding DOE58_RS11620 IPR009770 Domain of unknown function DUF1338 DOE58_RS11625 IPR019819 Carboxylesterase type B, conserved site DOE58_RS11625 IPR000997 Cholinesterase DOE58_RS11625 IPR019826 Carboxylesterase type B, active site DOE58_RS11625 IPR002018 Carboxylesterase, type B DOE58_RS11625 IPR029058 Alpha/Beta hydrolase fold DOE58_RS11630 IPR014756 Immunoglobulin E-set DOE58_RS11630 IPR013783 Immunoglobulin-like fold DOE58_RS11630 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS11630 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS11630 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE58_RS11630 IPR023724 Glucan biosynthesis, MdoD DOE58_RS11630 IPR014438 Glucan biosynthesis protein MdoG/MdoD DOE58_RS11630 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal DOE58_RS11630 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS11635 IPR023480 Uncharacterised protein family UPF0312/YceI DOE58_RS11635 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE58_RS11635 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE58_RS11640 IPR013785 Aldolase-type TIM barrel DOE58_RS11640 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DOE58_RS11640 IPR000262 FMN-dependent dehydrogenase DOE58_RS11640 IPR037396 FMN hydroxy acid dehydrogenase domain DOE58_RS11640 IPR014080 L-lactate oxidase DOE58_RS11645 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS11645 IPR024170 Aminoglycoside N6-acetyltransferase DOE58_RS11645 IPR000182 GNAT domain DOE58_RS11650 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS11650 IPR037171 NagB/RpiA transferase-like DOE58_RS11650 IPR001034 DeoR-type HTH domain DOE58_RS11650 IPR014036 DeoR C-terminal sensor domain DOE58_RS11655 IPR011060 Ribulose-phosphate binding barrel DOE58_RS11655 IPR000056 Ribulose-phosphate 3-epimerase-like DOE58_RS11655 IPR013785 Aldolase-type TIM barrel DOE58_RS11660 IPR002178 PTS EIIA type-2 domain DOE58_RS11660 IPR016152 Phosphotransferase/anion transporter DOE58_RS11665 IPR011060 Ribulose-phosphate binding barrel DOE58_RS11665 IPR005137 Membrane complex biogenesis protein, BtpA family DOE58_RS11670 IPR013853 Galactitol permease IIC component DOE58_RS11670 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS11670 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS11675 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS11675 IPR036095 PTS system IIB component-like superfamily DOE58_RS11675 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS11680 IPR023367 Peptidase M42, domain 2 DOE58_RS11680 IPR008007 Peptidase M42 DOE58_RS11685 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS11685 IPR000182 GNAT domain DOE58_RS11690 IPR040831 Beta solenoid repeat from YDCK DOE58_RS11690 IPR011004 Trimeric LpxA-like superfamily DOE58_RS11695 IPR004695 Voltage-dependent anion channel DOE58_RS11695 IPR039264 Tellurite resistance protein TehA DOE58_RS11695 IPR011552 Tellurite resistance protein TehA/malic acid transport protein DOE58_RS11695 IPR038665 Voltage-dependent anion channel superfamily DOE58_RS11700 IPR004537 Tellurite resistance methyltransferase, TehB DOE58_RS11700 IPR015985 Tellurite resistance methyltransferase TehB-like domain DOE58_RS11700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS11705 IPR021747 Protein of unknown function DUF3313 DOE58_RS11710 IPR004711 Benzoate transporter DOE58_RS11715 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS11715 IPR014710 RmlC-like jelly roll fold DOE58_RS11715 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS11715 IPR011051 RmlC-like cupin domain superfamily DOE58_RS11715 IPR013096 Cupin 2, conserved barrel DOE58_RS11720 IPR020988 Peptidase U32, collagenase DOE58_RS11720 IPR001539 Peptidase U32 DOE58_RS11725 IPR020117 Uncharacterised protein family YncJ DOE58_RS11730 IPR010637 Sif DOE58_RS11745 IPR000755 D-alanyl-D-alanine dipeptidase DOE58_RS11745 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE58_RS11750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS11750 IPR000524 Transcription regulator HTH, GntR DOE58_RS11750 IPR004839 Aminotransferase, class I/classII DOE58_RS11750 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS11750 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11750 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS11755 IPR015657 Aminobutyraldehyde dehydrogenase DOE58_RS11755 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS11755 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS11755 IPR017749 1-pyrroline dehydrogenase DOE58_RS11755 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS11755 IPR015590 Aldehyde dehydrogenase domain DOE58_RS11755 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS11765 IPR019689 Toxin GhoT/OrtT DOE58_RS11785 IPR019671 Protein of unknown function DUF2526 DOE58_RS11790 IPR006750 Putative inner membrane exporter, YdcZ DOE58_RS11795 IPR000182 GNAT domain DOE58_RS11795 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS11800 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11800 IPR011032 GroES-like superfamily DOE58_RS11800 IPR041694 Oxidoreductase, N-terminal domain DOE58_RS11800 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS11800 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS11805 IPR000524 Transcription regulator HTH, GntR DOE58_RS11805 IPR011711 GntR, C-terminal DOE58_RS11805 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS11805 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS11805 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS11810 IPR039426 Vitamin B12 transporter BtuB-like DOE58_RS11810 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS11810 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS11810 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS11810 IPR012910 TonB-dependent receptor, plug domain DOE58_RS11810 IPR010105 TonB-dependent siderophore receptor DOE58_RS11815 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DOE58_RS11815 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE58_RS11820 IPR010305 Protein of unknown function DUF903 DOE58_RS11820 IPR010920 LSM domain superfamily DOE58_RS11825 IPR004840 Amino acid permease, conserved site DOE58_RS11825 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS11835 IPR001447 Arylamine N-acetyltransferase DOE58_RS11835 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS11840 IPR003719 Phenazine biosynthesis PhzF protein DOE58_RS11845 IPR003816 Nitrate reductase, gamma subunit DOE58_RS11845 IPR023234 NarG-like domain DOE58_RS11845 IPR036197 NarG-like superfamily DOE58_RS11850 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS11850 IPR036411 TorD-like superfamily DOE58_RS11850 IPR003765 Nitrate reductase chaperone, NarJ DOE58_RS11855 IPR029263 Respiratory nitrate reductase beta, C-terminal DOE58_RS11855 IPR038262 Nitrate reductase beta, C-terminal domain superfamily DOE58_RS11855 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS11855 IPR006547 Nitrate reductase, beta subunit DOE58_RS11860 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS11860 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS11860 IPR037943 Nitrate reductase alpha subunit-like, MopB domain DOE58_RS11860 IPR028189 Nitrate reductase, alpha subunit, N-terminal DOE58_RS11860 IPR006468 Nitrate reductase, alpha subunit DOE58_RS11860 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS11860 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS11860 IPR006656 Molybdopterin oxidoreductase DOE58_RS11860 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS11865 IPR004737 Nitrate transporter DOE58_RS11865 IPR036259 MFS transporter superfamily DOE58_RS11865 IPR011701 Major facilitator superfamily DOE58_RS11870 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS11870 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS11870 IPR009057 Homeobox-like domain superfamily DOE58_RS11875 IPR011701 Major facilitator superfamily DOE58_RS11875 IPR020846 Major facilitator superfamily domain DOE58_RS11875 IPR036259 MFS transporter superfamily DOE58_RS11885 IPR033900 Porin domain, Gram-negative type DOE58_RS11885 IPR023614 Porin domain superfamily DOE58_RS11885 IPR001897 Porin, gammaproteobacterial DOE58_RS11885 IPR001702 Porin, Gram-negative type DOE58_RS11885 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS11895 IPR000620 EamA domain DOE58_RS11900 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS11900 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS11900 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS11900 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS11900 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS11900 IPR006443 Formate dehydrogenase-N, alpha subunit DOE58_RS11900 IPR006656 Molybdopterin oxidoreductase DOE58_RS11900 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS11905 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS11905 IPR006443 Formate dehydrogenase-N, alpha subunit DOE58_RS11905 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS11905 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS11905 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS11905 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS11905 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS11905 IPR006656 Molybdopterin oxidoreductase DOE58_RS11910 IPR014603 Formate dehydrogenase iron-sulphur subunit DOE58_RS11910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS11910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS11910 IPR015246 Formate dehydrogenase, transmembrane DOE58_RS11910 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DOE58_RS11910 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria DOE58_RS11915 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS11915 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS11915 IPR006471 Formate dehydrogenase, gamma subunit DOE58_RS11920 IPR011032 GroES-like superfamily DOE58_RS11920 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11920 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS11920 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS11920 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS11920 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS11925 IPR037062 Malic enzyme, N-terminal domain superfamily DOE58_RS11925 IPR012301 Malic enzyme, N-terminal domain DOE58_RS11925 IPR036291 NAD(P)-binding domain superfamily DOE58_RS11925 IPR001891 Malic oxidoreductase DOE58_RS11925 IPR012302 Malic enzyme, NAD-binding DOE58_RS11925 IPR015884 Malic enzyme, conserved site DOE58_RS11925 IPR023667 NAD-dependent malic enzyme, proteobacteria DOE58_RS11930 IPR012607 Ribosomal protein S22 DOE58_RS11935 IPR019625 Biofilm-dependent modulation protein Bdm, putative DOE58_RS11940 IPR036102 OsmC/Ohr superfamily DOE58_RS11940 IPR003718 OsmC/Ohr family DOE58_RS11940 IPR015946 K homology domain-like, alpha/beta DOE58_RS11940 IPR019904 Peroxiredoxin OsmC DOE58_RS11945 IPR027018 Hemolysin E DOE58_RS11960 IPR010486 HNS-dependent expression A/B DOE58_RS11960 IPR028623 HNS-dependent expression B DOE58_RS11960 IPR038303 HNS-dependent expression A/B superfamily DOE58_RS11970 IPR013783 Immunoglobulin-like fold DOE58_RS11970 IPR014756 Immunoglobulin E-set DOE58_RS11970 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE58_RS11970 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DOE58_RS11970 IPR012768 Malto-oligosyltrehalose trehalohydrolase DOE58_RS11970 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS11970 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS11970 IPR017853 Glycoside hydrolase superfamily DOE58_RS11975 IPR012767 Maltooligosyl trehalose synthase DOE58_RS11975 IPR017853 Glycoside hydrolase superfamily DOE58_RS11975 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS11980 IPR013783 Immunoglobulin-like fold DOE58_RS11980 IPR017853 Glycoside hydrolase superfamily DOE58_RS11980 IPR011837 Glycogen debranching enzyme, GlgX type DOE58_RS11980 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS11980 IPR004193 Glycoside hydrolase, family 13, N-terminal DOE58_RS11980 IPR014756 Immunoglobulin E-set DOE58_RS11980 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS11985 IPR004839 Aminotransferase, class I/classII DOE58_RS11985 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS11985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS11985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS11985 IPR027619 Putative C-S lyase DOE58_RS11990 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal DOE58_RS11990 IPR004770 Na+/H+ antiporter NhaC DOE58_RS11995 IPR028082 Periplasmic binding protein-like I DOE58_RS11995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS11995 IPR000843 LacI-type HTH domain DOE58_RS12000 IPR004136 Nitronate monooxygenase DOE58_RS12000 IPR013785 Aldolase-type TIM barrel DOE58_RS12005 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12005 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12005 IPR000847 Transcription regulator HTH, LysR DOE58_RS12005 IPR005119 LysR, substrate-binding DOE58_RS12040 IPR038743 YjgH-like DOE58_RS12040 IPR035959 RutC-like superfamily DOE58_RS12040 IPR006175 YjgF/YER057c/UK114 family DOE58_RS12045 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DOE58_RS12045 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DOE58_RS12045 IPR042119 QueA, domain 2 DOE58_RS12045 IPR042118 QueA, domain 1 DOE58_RS12055 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS12055 IPR002938 FAD-binding domain DOE58_RS12060 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE58_RS12060 IPR005829 Sugar transporter, conserved site DOE58_RS12060 IPR036259 MFS transporter superfamily DOE58_RS12060 IPR020846 Major facilitator superfamily domain DOE58_RS12060 IPR011701 Major facilitator superfamily DOE58_RS12070 IPR000849 Sugar phosphate transporter DOE58_RS12070 IPR011701 Major facilitator superfamily DOE58_RS12070 IPR020846 Major facilitator superfamily domain DOE58_RS12070 IPR036259 MFS transporter superfamily DOE58_RS12075 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12075 IPR011032 GroES-like superfamily DOE58_RS12075 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS12075 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS12080 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS12080 IPR000524 Transcription regulator HTH, GntR DOE58_RS12080 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12080 IPR011711 GntR, C-terminal DOE58_RS12080 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12090 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DOE58_RS12090 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS12090 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS12090 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE58_RS12090 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE58_RS12090 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE58_RS12090 IPR001821 [NiFe]-hydrogenase, small subunit DOE58_RS12095 IPR001501 Nickel-dependent hydrogenase, large subunit DOE58_RS12095 IPR029014 [NiFe]-hydrogenase, large subunit DOE58_RS12095 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site DOE58_RS12100 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit DOE58_RS12100 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS12100 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS12105 IPR000671 Peptidase A31 family DOE58_RS12105 IPR004419 Peptidase A31, hydrogenase expression/formation protein DOE58_RS12105 IPR023430 Peptidase HybD-like domain superfamily DOE58_RS12110 IPR037254 HupF/HypC superfamily DOE58_RS12110 IPR019812 Hydrogenase assembly chaperone, conserved site DOE58_RS12110 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE58_RS12120 IPR006894 HupH hydrogenase expression protein, C-terminal DOE58_RS12120 IPR038527 HupH, C-terminal domain superfamily DOE58_RS12130 IPR000688 Hydrogenase maturation factor HypA/HybF DOE58_RS12130 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site DOE58_RS12135 IPR001702 Porin, Gram-negative type DOE58_RS12135 IPR023614 Porin domain superfamily DOE58_RS12135 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS12135 IPR001897 Porin, gammaproteobacterial DOE58_RS12145 IPR021134 Bestrophin/UPF0187 DOE58_RS12150 IPR020378 Protein of unknown function DUF4186 DOE58_RS12155 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS12155 IPR015868 Glutaminase DOE58_RS12160 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS12160 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS12160 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS12160 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS12160 IPR015590 Aldehyde dehydrogenase domain DOE58_RS12165 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12165 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12165 IPR005119 LysR, substrate-binding DOE58_RS12165 IPR000847 Transcription regulator HTH, LysR DOE58_RS12175 IPR020846 Major facilitator superfamily domain DOE58_RS12175 IPR023495 Sugar efflux transporter, putative DOE58_RS12175 IPR036259 MFS transporter superfamily DOE58_RS12175 IPR011701 Major facilitator superfamily DOE58_RS12180 IPR002771 Multiple antibiotic resistance (MarC)-related DOE58_RS12185 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12185 IPR000835 MarR-type HTH domain DOE58_RS12185 IPR023187 Transcriptional regulator MarR-type, conserved site DOE58_RS12185 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12190 IPR018062 HTH domain AraC-type, conserved site DOE58_RS12190 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS12190 IPR009057 Homeobox-like domain superfamily DOE58_RS12195 IPR025732 MarB protein DOE58_RS12200 IPR000620 EamA domain DOE58_RS12205 IPR011701 Major facilitator superfamily DOE58_RS12205 IPR020846 Major facilitator superfamily domain DOE58_RS12205 IPR036259 MFS transporter superfamily DOE58_RS12220 IPR005220 Bacterial OB-fold DOE58_RS12220 IPR016052 Bacteriophage 933W, L0136 DOE58_RS12220 IPR036700 Bacterial OB-fold superfamily DOE58_RS12225 IPR008136 CinA, C-terminal DOE58_RS12225 IPR036653 CinA-like, C-terminal DOE58_RS12230 IPR019626 Stress-induced protein, KGG, repeat DOE58_RS12240 IPR001567 Peptidase M3A/M3B catalytic domain DOE58_RS12240 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DOE58_RS12245 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS12245 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS12245 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12250 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS12250 IPR011711 GntR, C-terminal DOE58_RS12250 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12250 IPR000524 Transcription regulator HTH, GntR DOE58_RS12250 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12255 IPR017704 Putative selenium-binding protein YdfZ DOE58_RS12260 IPR013118 Mannitol dehydrogenase, C-terminal DOE58_RS12260 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS12260 IPR023027 Mannitol dehydrogenase, conserved site DOE58_RS12260 IPR000669 Mannitol dehydrogenase DOE58_RS12260 IPR013131 Mannitol dehydrogenase, N-terminal DOE58_RS12260 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12260 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS12265 IPR005828 Major facilitator, sugar transporter-like DOE58_RS12265 IPR036259 MFS transporter superfamily DOE58_RS12265 IPR020846 Major facilitator superfamily domain DOE58_RS12265 IPR011701 Major facilitator superfamily DOE58_RS12265 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS12270 IPR011032 GroES-like superfamily DOE58_RS12270 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS12270 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12270 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS12270 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS12275 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE58_RS12275 IPR034593 Mandelate racemase-like DOE58_RS12275 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DOE58_RS12275 IPR029065 Enolase C-terminal domain-like DOE58_RS12275 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE58_RS12275 IPR029017 Enolase-like, N-terminal DOE58_RS12275 IPR036849 Enolase-like, C-terminal domain superfamily DOE58_RS12275 IPR034589 D-mannonate dehydratase-like DOE58_RS12280 IPR003844 Uncharacterised protein family UPF0060 DOE58_RS12285 IPR009700 Protein of unknown function DUF1283 DOE58_RS12290 IPR000182 GNAT domain DOE58_RS12290 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS12295 IPR010646 Uncharacterised protein family UPF0257 DOE58_RS12300 IPR010595 Protein of unknown function DUF1161 DOE58_RS12305 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS12305 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS12305 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS12305 IPR006656 Molybdopterin oxidoreductase DOE58_RS12305 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS12305 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS12305 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE58_RS12310 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS12310 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS12310 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE58_RS12310 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS12310 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS12310 IPR006656 Molybdopterin oxidoreductase DOE58_RS12310 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS12310 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS12315 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS12315 IPR014297 Dimethylsulphoxide reductase, chain B DOE58_RS12315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS12320 IPR007059 DMSO reductase anchor subunit (DmsC) DOE58_RS12325 IPR028611 Tat proofreading chaperone DmsD DOE58_RS12325 IPR036411 TorD-like superfamily DOE58_RS12325 IPR026269 Tat proofreading chaperone DmsD-type DOE58_RS12325 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS12330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS12330 IPR035906 MetI-like superfamily DOE58_RS12335 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DOE58_RS12340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS12340 IPR035906 MetI-like superfamily DOE58_RS12345 IPR017871 ABC transporter, conserved site DOE58_RS12345 IPR003593 AAA+ ATPase domain DOE58_RS12345 IPR005892 Glycine betaine transport ATP-binding subunit DOE58_RS12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS12345 IPR003439 ABC transporter-like DOE58_RS12345 IPR000644 CBS domain DOE58_RS12350 IPR023790 Chloride channel, voltage-gated, ClcB DOE58_RS12350 IPR001807 Chloride channel, voltage gated DOE58_RS12350 IPR014743 Chloride channel, core DOE58_RS12355 IPR004472 Dethiobiotin synthase BioD DOE58_RS12355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS12360 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12360 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12360 IPR000600 ROK family DOE58_RS12370 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12370 IPR000847 Transcription regulator HTH, LysR DOE58_RS12370 IPR005119 LysR, substrate-binding DOE58_RS12370 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12375 IPR020846 Major facilitator superfamily domain DOE58_RS12375 IPR011701 Major facilitator superfamily DOE58_RS12375 IPR036259 MFS transporter superfamily DOE58_RS12375 IPR005829 Sugar transporter, conserved site DOE58_RS12385 IPR008256 Peptidase S1B DOE58_RS12385 IPR001254 Serine proteases, trypsin domain DOE58_RS12385 IPR018114 Serine proteases, trypsin family, histidine active site DOE58_RS12385 IPR033116 Serine proteases, trypsin family, serine active site DOE58_RS12385 IPR009003 Peptidase S1, PA clan DOE58_RS12390 IPR023737 Spermidine export protein MdtI DOE58_RS12390 IPR000390 Small multidrug resistance protein family DOE58_RS12395 IPR000390 Small multidrug resistance protein family DOE58_RS12395 IPR023740 Spermidine export protein MdtJ DOE58_RS12405 IPR002549 Transmembrane protein TqsA-like DOE58_RS12410 IPR012136 NADP transhydrogenase, beta subunit DOE58_RS12410 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS12410 IPR034300 NADP transhydrogenase beta-like domain DOE58_RS12415 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE58_RS12415 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DOE58_RS12415 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE58_RS12415 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DOE58_RS12415 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DOE58_RS12415 IPR026255 NAD(P) transhydrogenase, alpha subunit DOE58_RS12415 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12420 IPR025543 Dodecin-like DOE58_RS12420 IPR036275 YdgH-like superfamily DOE58_RS12420 IPR010854 Domain of unknown function DUF1471 DOE58_RS12420 IPR025539 YdgH protein DOE58_RS12425 IPR002293 Amino acid/polyamine transporter I DOE58_RS12425 IPR004754 Amino acid antiporter DOE58_RS12430 IPR009707 Membrane protein GlpM/YdgC DOE58_RS12435 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS12435 IPR011006 CheY-like superfamily DOE58_RS12435 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS12435 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS12435 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS12435 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12450 IPR001702 Porin, Gram-negative type DOE58_RS12450 IPR023614 Porin domain superfamily DOE58_RS12450 IPR033900 Porin domain, Gram-negative type DOE58_RS12450 IPR001897 Porin, gammaproteobacterial DOE58_RS12455 IPR026912 Adenine deaminase C-terminal domain DOE58_RS12455 IPR006679 Adenine deaminase DOE58_RS12455 IPR006680 Amidohydrolase-related DOE58_RS12455 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS12455 IPR032466 Metal-dependent hydrolase DOE58_RS12460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS12460 IPR003660 HAMP domain DOE58_RS12460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS12460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS12460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS12460 IPR005467 Histidine kinase domain DOE58_RS12460 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS12465 IPR036384 Replication terminator Tus superfamily DOE58_RS12465 IPR036381 Replication terminator Tus, domain 1 DOE58_RS12465 IPR008865 DNA replication terminus site-binding protein DOE58_RS12470 IPR000362 Fumarate lyase family DOE58_RS12470 IPR020557 Fumarate lyase, conserved site DOE58_RS12470 IPR018951 Fumarase C, C-terminal DOE58_RS12470 IPR024083 Fumarase/histidase, N-terminal DOE58_RS12470 IPR005677 Fumarate hydratase, class II DOE58_RS12470 IPR022761 Fumarate lyase, N-terminal DOE58_RS12470 IPR008948 L-Aspartase-like DOE58_RS12475 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE58_RS12475 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE58_RS12475 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE58_RS12475 IPR011167 Iron-dependent fumarate hydratase DOE58_RS12475 IPR020557 Fumarate lyase, conserved site DOE58_RS12480 IPR001250 Mannose-6-phosphate isomerase, type I DOE58_RS12480 IPR016305 Mannose-6-phosphate isomerase DOE58_RS12480 IPR018050 Phosphomannose isomerase, type I, conserved site DOE58_RS12480 IPR014710 RmlC-like jelly roll fold DOE58_RS12480 IPR011051 RmlC-like cupin domain superfamily DOE58_RS12485 IPR010352 Protein of unknown function DUF945 DOE58_RS12490 IPR028082 Periplasmic binding protein-like I DOE58_RS12490 IPR000843 LacI-type HTH domain DOE58_RS12490 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE58_RS12490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS12495 IPR001996 Phosphotransferase system, IIB component, type 1 DOE58_RS12495 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE58_RS12495 IPR003352 Phosphotransferase system, EIIC DOE58_RS12495 IPR036878 Glucose permease domain IIB DOE58_RS12495 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE58_RS12495 IPR011301 PTS system, maltose/glucose-specific IIBC component DOE58_RS12495 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE58_RS12500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS12500 IPR004839 Aminotransferase, class I/classII DOE58_RS12500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS12500 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS12500 IPR027619 Putative C-S lyase DOE58_RS12505 IPR006650 Adenosine/AMP deaminase active site DOE58_RS12505 IPR001365 Adenosine/AMP deaminase domain DOE58_RS12505 IPR032466 Metal-dependent hydrolase DOE58_RS12505 IPR028893 Adenosine deaminase DOE58_RS12505 IPR006330 Adenosine/adenine deaminase DOE58_RS12510 IPR004104 Oxidoreductase, C-terminal DOE58_RS12510 IPR036291 NAD(P)-binding domain superfamily DOE58_RS12510 IPR000683 Oxidoreductase, N-terminal DOE58_RS12520 IPR036666 HHA superfamily DOE58_RS12520 IPR007985 Haemolysin expression modulating, HHA DOE58_RS12525 IPR019690 Protein of unknown function DUF2569 DOE58_RS12530 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA DOE58_RS12530 IPR003667 NqrDE/RnfAE DOE58_RS12535 IPR007202 4Fe-4S domain DOE58_RS12535 IPR011005 Dihydropteroate synthase-like DOE58_RS12535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS12535 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS12535 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB DOE58_RS12535 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria DOE58_RS12540 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DOE58_RS12540 IPR009051 Alpha-helical ferredoxin DOE58_RS12540 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DOE58_RS12540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS12540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS12540 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DOE58_RS12540 IPR019554 Soluble ligand binding domain DOE58_RS12540 IPR026902 RnfC Barrel sandwich hybrid domain DOE58_RS12545 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD DOE58_RS12545 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D DOE58_RS12550 IPR007329 FMN-binding DOE58_RS12550 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG DOE58_RS12555 IPR010968 Ion-translocating oxidoreductase complex subunit E DOE58_RS12555 IPR003667 NqrDE/RnfAE DOE58_RS12560 IPR011257 DNA glycosylase DOE58_RS12560 IPR004035 Endonuclease III, iron-sulphur binding site DOE58_RS12560 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DOE58_RS12560 IPR003265 HhH-GPD domain DOE58_RS12560 IPR000445 Helix-hairpin-helix motif DOE58_RS12560 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DOE58_RS12560 IPR005759 Endonuclease III DOE58_RS12560 IPR004036 Endonuclease III-like, conserved site-2 DOE58_RS12565 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A DOE58_RS12565 IPR005279 Dipeptide/tripeptide permease DOE58_RS12565 IPR020846 Major facilitator superfamily domain DOE58_RS12565 IPR036259 MFS transporter superfamily DOE58_RS12565 IPR000109 Proton-dependent oligopeptide transporter family DOE58_RS12565 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE58_RS12570 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS12570 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS12570 IPR040079 Glutathione Transferase family DOE58_RS12570 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS12570 IPR036249 Thioredoxin-like superfamily DOE58_RS12570 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS12575 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DOE58_RS12575 IPR029056 Ribokinase-like DOE58_RS12575 IPR023685 Pyridoxal kinase PdxY DOE58_RS12575 IPR004625 Pyridoxine kinase DOE58_RS12580 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS12580 IPR002942 RNA-binding S4 domain DOE58_RS12580 IPR036986 RNA-binding S4 domain superfamily DOE58_RS12580 IPR002307 Tyrosine-tRNA ligase DOE58_RS12580 IPR024088 Tyrosine-tRNA ligase, bacterial-type DOE58_RS12580 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 DOE58_RS12580 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE58_RS12580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS12585 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative DOE58_RS12585 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DOE58_RS12585 IPR012349 FMN-binding split barrel DOE58_RS12585 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DOE58_RS12585 IPR000659 Pyridoxamine 5'-phosphate oxidase DOE58_RS12590 IPR036328 C-type lysozyme inhibitor superfamily DOE58_RS12590 IPR018660 C-type lysozyme inhibitor DOE58_RS12595 IPR005338 Anhydro-N-acetylmuramic acid kinase DOE58_RS12600 IPR008816 Glycine zipper 2TM domain DOE58_RS12605 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12605 IPR000835 MarR-type HTH domain DOE58_RS12605 IPR023187 Transcriptional regulator MarR-type, conserved site DOE58_RS12605 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12605 IPR023071 Transcriptional regulator, SlyA DOE58_RS12610 IPR012451 Protein of unknown function DUF1656 DOE58_RS12615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS12615 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS12620 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DOE58_RS12625 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DOE58_RS12625 IPR018152 Superoxide dismutase, copper/zinc, binding site DOE58_RS12625 IPR001424 Superoxide dismutase, copper/zinc binding domain DOE58_RS12625 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DOE58_RS12630 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS12630 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS12630 IPR020471 Aldo/keto reductase DOE58_RS12635 IPR010710 Protein of unknown function DUF1289 DOE58_RS12640 IPR011075 Tetracyclin repressor-like, C-terminal domain DOE58_RS12640 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS12640 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS12640 IPR009057 Homeobox-like domain superfamily DOE58_RS12645 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DOE58_RS12645 IPR013785 Aldolase-type TIM barrel DOE58_RS12650 IPR004361 Glyoxalase I DOE58_RS12650 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE58_RS12650 IPR037523 Vicinal oxygen chelate (VOC) domain DOE58_RS12650 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE58_RS12650 IPR018146 Glyoxalase I, conserved site DOE58_RS12655 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE58_RS12655 IPR036397 Ribonuclease H superfamily DOE58_RS12655 IPR012337 Ribonuclease H-like superfamily DOE58_RS12655 IPR005987 Ribonuclease T DOE58_RS12660 IPR004480 Monothiol glutaredoxin-related DOE58_RS12660 IPR014434 Monothiol glutaredoxin DOE58_RS12660 IPR036249 Thioredoxin-like superfamily DOE58_RS12660 IPR033658 Glutaredoxin, PICOT-like DOE58_RS12660 IPR002109 Glutaredoxin DOE58_RS12665 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS12665 IPR000064 Endopeptidase, NLPC/P60 domain DOE58_RS12670 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOE58_RS12670 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOE58_RS12670 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOE58_RS12670 IPR019833 Manganese/iron superoxide dismutase, binding site DOE58_RS12670 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOE58_RS12670 IPR001189 Manganese/iron superoxide dismutase DOE58_RS12685 IPR000843 LacI-type HTH domain DOE58_RS12685 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS12685 IPR023588 Transcription regulator HTH, PurR DOE58_RS12685 IPR028082 Periplasmic binding protein-like I DOE58_RS12690 IPR005119 LysR, substrate-binding DOE58_RS12690 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS12690 IPR000847 Transcription regulator HTH, LysR DOE58_RS12690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12695 IPR011701 Major facilitator superfamily DOE58_RS12695 IPR020846 Major facilitator superfamily domain DOE58_RS12695 IPR036259 MFS transporter superfamily DOE58_RS12695 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DOE58_RS12700 IPR003333 Mycolic acid cyclopropane synthase DOE58_RS12700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS12705 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS12705 IPR026017 Lumazine-binding domain DOE58_RS12705 IPR001783 Lumazine-binding protein DOE58_RS12705 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOE58_RS12710 IPR002528 Multi antimicrobial extrusion protein DOE58_RS12710 IPR022913 Multidrug resistance protein MdtK DOE58_RS12725 IPR006307 Type III exporter system, secretion apparatus protein BsaZ DOE58_RS12725 IPR029025 Type III secretion system substrate exporter, C-terminal DOE58_RS12725 IPR006135 Type III secretion system substrate exporter DOE58_RS12730 IPR006304 Type III secretion protein SpaR/YscT DOE58_RS12730 IPR002010 Type III secretion system inner membrane R protein DOE58_RS12735 IPR006306 Type III secretion protein HrpO DOE58_RS12735 IPR002191 Bacterial export protein family 3 DOE58_RS12740 IPR005838 Type III secretion system inner membrane P protein DOE58_RS12740 IPR005773 Yop virulence translocation protein R DOE58_RS12745 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO DOE58_RS12745 IPR036429 SpoA-like superfamily DOE58_RS12745 IPR001543 Surface presentation of antigen (SpoA) DOE58_RS12745 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DOE58_RS12760 IPR040627 T3SS EscN ATPase, C-terminal DOE58_RS12760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS12760 IPR013380 ATPase, type III secretion system, H+-transporting DOE58_RS12760 IPR003593 AAA+ ATPase domain DOE58_RS12760 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS12760 IPR005714 ATPase, type III secretion system, FliI/YscN DOE58_RS12765 IPR042193 FHIPEP, domain 3 DOE58_RS12765 IPR006302 Type III secretion protein HrcV DOE58_RS12765 IPR025505 FHIPEP conserved site DOE58_RS12765 IPR042196 FHIPEP, domain 4 DOE58_RS12765 IPR001712 Type III secretion system FHIPEP DOE58_RS12770 IPR017033 Type III secretion system apparatus protein SsaM DOE58_RS12775 IPR013351 Type III secretion system effector delivery regulator TyeA-related DOE58_RS12775 IPR010812 Hypersensitivity response secretion-like, HrpJ DOE58_RS12780 IPR012842 Type III secretion system HrpE/YscL DOE58_RS12790 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ DOE58_RS12790 IPR006182 Secretory protein YscJ/FliF DOE58_RS12830 IPR008611 Protein EaeB DOE58_RS12835 IPR006972 Secretion system effector C, SseC-like DOE58_RS12845 IPR035074 EspA/CesA-like DOE58_RS12845 IPR005095 EspA-like secreted protein DOE58_RS12865 IPR038591 NolW-like superfamily DOE58_RS12865 IPR005644 NolW-like DOE58_RS12865 IPR004846 Type II/III secretion system DOE58_RS12865 IPR004845 Type II secretion system GspD, conserved site DOE58_RS12865 IPR003522 Type III secretion system outer membrane pore YscC/HrcC DOE58_RS12875 IPR003660 HAMP domain DOE58_RS12875 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS12875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS12875 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS12875 IPR005467 Histidine kinase domain DOE58_RS12875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS12875 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DOE58_RS12875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS12875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS12875 IPR036641 HPT domain superfamily DOE58_RS12875 IPR019247 Histidine kinase BarA, N-terminal DOE58_RS12875 IPR011006 CheY-like superfamily DOE58_RS12880 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS12880 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS12880 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS12880 IPR011006 CheY-like superfamily DOE58_RS12885 IPR009061 Putative DNA-binding domain superfamily DOE58_RS12885 IPR000551 MerR-type HTH domain DOE58_RS12890 IPR013560 Domain of unknown function DUF1722 DOE58_RS12895 IPR024493 Fumarase D DOE58_RS12900 IPR011006 CheY-like superfamily DOE58_RS12900 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS12900 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS12900 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS12905 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS12905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS12905 IPR005467 Histidine kinase domain DOE58_RS12905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS12905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS12905 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS12910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS12910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS12910 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS12915 IPR005614 NrfD family DOE58_RS12920 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS12920 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS12920 IPR037946 Tetrathionate reductase subunit A, MopB domain DOE58_RS12920 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS12920 IPR041929 Tetrathionate reductase subunit A, N-terminal DOE58_RS12920 IPR006656 Molybdopterin oxidoreductase DOE58_RS12925 IPR002139 Ribokinase/fructokinase DOE58_RS12925 IPR011611 Carbohydrate kinase PfkB DOE58_RS12925 IPR011877 Ribokinase DOE58_RS12925 IPR029056 Ribokinase-like DOE58_RS12925 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS12935 IPR029058 Alpha/Beta hydrolase fold DOE58_RS12935 IPR002410 Peptidase S33 DOE58_RS12935 IPR005945 Proline-specific peptidase DOE58_RS12935 IPR000073 Alpha/beta hydrolase fold-1 DOE58_RS12940 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS12950 IPR015806 Pyruvate kinase, insert domain superfamily DOE58_RS12950 IPR036918 Pyruvate kinase, C-terminal domain superfamily DOE58_RS12950 IPR015795 Pyruvate kinase, C-terminal DOE58_RS12950 IPR015793 Pyruvate kinase, barrel DOE58_RS12950 IPR018209 Pyruvate kinase, active site DOE58_RS12950 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE58_RS12950 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS12950 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS12950 IPR001697 Pyruvate kinase DOE58_RS12955 IPR016367 Murein-lipoprotein DOE58_RS12955 IPR006817 Lipoprotein leucine-zipper DOE58_RS12960 IPR041597 L,D-transpeptidase C-terminal domain DOE58_RS12960 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS12960 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS12960 IPR018392 LysM domain DOE58_RS12965 IPR003808 Fe-S metabolism associated domain, SufE-like DOE58_RS12965 IPR023939 Cysteine desulfuration protein SufE DOE58_RS12970 IPR010970 Cysteine desulfurase, SufS DOE58_RS12970 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE58_RS12970 IPR000192 Aminotransferase class V domain DOE58_RS12970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS12970 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS12970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS12975 IPR000825 SUF system FeS cluster assembly, SufBD DOE58_RS12975 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE58_RS12975 IPR011542 SUF system FeS cluster assembly, SufD DOE58_RS12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS12980 IPR010230 FeS cluster assembly SUF system, ATPase SufC DOE58_RS12980 IPR003593 AAA+ ATPase domain DOE58_RS12980 IPR017871 ABC transporter, conserved site DOE58_RS12980 IPR003439 ABC transporter-like DOE58_RS12985 IPR010231 SUF system FeS cluster assembly, SufB DOE58_RS12985 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE58_RS12985 IPR000825 SUF system FeS cluster assembly, SufBD DOE58_RS12990 IPR000361 FeS cluster biogenesis DOE58_RS12990 IPR016092 FeS cluster insertion protein DOE58_RS12990 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE58_RS12990 IPR035903 HesB-like domain superfamily DOE58_RS12990 IPR011298 FeS assembly scaffold SufA DOE58_RS12995 IPR001991 Sodium:dicarboxylate symporter DOE58_RS12995 IPR036458 Sodium:dicarboxylate symporter superfamily DOE58_RS13000 IPR031830 Uncharacterised protein YdiH DOE58_RS13005 IPR003736 Phenylacetic acid degradation-related domain DOE58_RS13005 IPR029069 HotDog domain superfamily DOE58_RS13005 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI DOE58_RS13005 IPR006683 Thioesterase domain DOE58_RS13010 IPR009051 Alpha-helical ferredoxin DOE58_RS13010 IPR016164 FAD-linked oxidase-like, C-terminal DOE58_RS13010 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS13010 IPR004113 FAD-linked oxidase, C-terminal DOE58_RS13010 IPR006094 FAD linked oxidase, N-terminal DOE58_RS13010 IPR016166 FAD-binding domain, PCMH-type DOE58_RS13010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS13010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS13015 IPR002549 Transmembrane protein TqsA-like DOE58_RS13025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS13025 IPR027910 YdiL domain superfamily DOE58_RS13025 IPR015060 Protein of unknown function DUF1870 DOE58_RS13030 IPR005829 Sugar transporter, conserved site DOE58_RS13030 IPR036259 MFS transporter superfamily DOE58_RS13030 IPR020846 Major facilitator superfamily domain DOE58_RS13030 IPR011701 Major facilitator superfamily DOE58_RS13035 IPR036259 MFS transporter superfamily DOE58_RS13035 IPR011701 Major facilitator superfamily DOE58_RS13035 IPR020846 Major facilitator superfamily domain DOE58_RS13040 IPR022872 Quinate/Shikimate dehydrogenase DOE58_RS13040 IPR041121 SDH, C-terminal DOE58_RS13040 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DOE58_RS13040 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13040 IPR022893 Shikimate dehydrogenase family DOE58_RS13045 IPR001381 3-dehydroquinate dehydratase type I DOE58_RS13045 IPR018508 3-dehydroquinate dehydratase, active site DOE58_RS13045 IPR013785 Aldolase-type TIM barrel DOE58_RS13050 IPR037171 NagB/RpiA transferase-like DOE58_RS13050 IPR004165 Coenzyme A transferase family I DOE58_RS13050 IPR014388 3-oxoacid CoA-transferase DOE58_RS13055 IPR006089 Acyl-CoA dehydrogenase, conserved site DOE58_RS13055 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE58_RS13055 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE58_RS13055 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOE58_RS13055 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOE58_RS13055 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE58_RS13055 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE58_RS13060 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS13060 IPR014710 RmlC-like jelly roll fold DOE58_RS13060 IPR011051 RmlC-like cupin domain superfamily DOE58_RS13060 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS13060 IPR009057 Homeobox-like domain superfamily DOE58_RS13065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS13065 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DOE58_RS13065 IPR012255 Electron transfer flavoprotein, beta subunit DOE58_RS13065 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE58_RS13065 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DOE58_RS13070 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS13070 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE58_RS13070 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DOE58_RS13070 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DOE58_RS13070 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DOE58_RS13070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS13075 IPR039651 Protein FixC-like DOE58_RS13075 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS13075 IPR002938 FAD-binding domain DOE58_RS13080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS13080 IPR012206 Ferredoxin-like, FixX DOE58_RS13085 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS13085 IPR000873 AMP-dependent synthetase/ligase DOE58_RS13085 IPR020845 AMP-binding, conserved site DOE58_RS13085 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS13090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS13090 IPR008279 PEP-utilising enzyme, mobile domain DOE58_RS13090 IPR006319 Phosphoenolpyruvate synthase DOE58_RS13090 IPR018274 PEP-utilising enzyme, active site DOE58_RS13090 IPR000121 PEP-utilising enzyme, C-terminal DOE58_RS13090 IPR023151 PEP-utilising enzyme, conserved site DOE58_RS13090 IPR036637 Phosphohistidine domain superfamily DOE58_RS13090 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding DOE58_RS13090 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS13090 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS13095 IPR005177 Bifunctional kinase-pyrophosphorylase DOE58_RS13095 IPR026530 Phosphoenolpyruvate synthase regulatory protein DOE58_RS13100 IPR006219 DHAP synthase, class 1 DOE58_RS13100 IPR006218 DAHP synthetase I/KDSA DOE58_RS13100 IPR013785 Aldolase-type TIM barrel DOE58_RS13105 IPR019600 Hemin uptake protein HemP DOE58_RS13110 IPR003846 Protein adenylyltransferase SelO DOE58_RS13130 IPR038765 Papain-like cysteine peptidase superfamily DOE58_RS13130 IPR000064 Endopeptidase, NLPC/P60 domain DOE58_RS13135 IPR003593 AAA+ ATPase domain DOE58_RS13135 IPR003439 ABC transporter-like DOE58_RS13135 IPR023693 ABC transporter, vitamin B12, BtuD DOE58_RS13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS13135 IPR017871 ABC transporter, conserved site DOE58_RS13140 IPR029759 Glutathione peroxidase active site DOE58_RS13140 IPR033674 Thioredoxin/glutathione peroxidase BtuE DOE58_RS13140 IPR000889 Glutathione peroxidase DOE58_RS13140 IPR036249 Thioredoxin-like superfamily DOE58_RS13140 IPR029760 Glutathione peroxidase conserved site DOE58_RS13145 IPR000522 ABC transporter, permease protein, BtuC-like DOE58_RS13145 IPR037294 ABC transporter, BtuC-like DOE58_RS13145 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC DOE58_RS13150 IPR005684 Integration host factor, alpha subunit DOE58_RS13150 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE58_RS13150 IPR000119 Histone-like DNA-binding protein DOE58_RS13150 IPR020816 Histone-like DNA-binding protein, conserved site DOE58_RS13155 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS13155 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily DOE58_RS13155 IPR005147 tRNA synthetase, B5-domain DOE58_RS13155 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit DOE58_RS13155 IPR005146 B3/B4 tRNA-binding domain DOE58_RS13155 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DOE58_RS13155 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain DOE58_RS13155 IPR002547 tRNA-binding domain DOE58_RS13155 IPR005121 Ferrodoxin-fold anticodon-binding domain DOE58_RS13155 IPR009061 Putative DNA-binding domain superfamily DOE58_RS13155 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain DOE58_RS13160 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS13160 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DOE58_RS13160 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DOE58_RS13160 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DOE58_RS13160 IPR002319 Phenylalanyl-tRNA synthetase DOE58_RS13160 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE58_RS13170 IPR035566 Ribosomal protein L20, C-terminal DOE58_RS13170 IPR005813 Ribosomal protein L20 DOE58_RS13175 IPR037229 Ribosomal protein L35 superfamily DOE58_RS13175 IPR001706 Ribosomal protein L35, non-mitochondrial DOE58_RS13175 IPR018265 Ribosomal protein L35, conserved site DOE58_RS13175 IPR021137 Ribosomal protein L35 DOE58_RS13180 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DOE58_RS13180 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DOE58_RS13180 IPR019814 Translation initiation factor 3, N-terminal DOE58_RS13180 IPR001288 Translation initiation factor 3 DOE58_RS13180 IPR019813 Translation initiation factor 3, conserved site DOE58_RS13180 IPR019815 Translation initiation factor 3, C-terminal DOE58_RS13185 IPR036621 Anticodon-binding domain superfamily DOE58_RS13185 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE58_RS13185 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS13185 IPR004154 Anticodon-binding DOE58_RS13185 IPR012675 Beta-grasp domain superfamily DOE58_RS13185 IPR004095 TGS DOE58_RS13185 IPR002320 Threonine-tRNA ligase, class IIa DOE58_RS13185 IPR012676 TGS-like DOE58_RS13185 IPR033728 Threonine-tRNA ligase catalytic core domain DOE58_RS13185 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DOE58_RS13185 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DOE58_RS13205 IPR020821 Extracellular Endonuclease, subunit A DOE58_RS13205 IPR040255 Non-specific endonuclease DOE58_RS13205 IPR001604 DNA/RNA non-specific endonuclease DOE58_RS13205 IPR018524 DNA/RNA non-specific endonuclease, active site DOE58_RS13220 IPR007433 Protein of unknown function DUF481 DOE58_RS13225 IPR029056 Ribokinase-like DOE58_RS13225 IPR017583 Tagatose/fructose phosphokinase DOE58_RS13225 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS13225 IPR011611 Carbohydrate kinase PfkB DOE58_RS13230 IPR038241 Endoribonuclease antitoxin GhoS superfamily DOE58_RS13230 IPR022597 Endoribonuclease antitoxin GhoS DOE58_RS13235 IPR011009 Protein kinase-like domain superfamily DOE58_RS13235 IPR016477 Fructosamine/Ketosamine-3-kinase DOE58_RS13240 IPR025229 YniB-like protein DOE58_RS13245 IPR006439 HAD hydrolase, subfamily IA DOE58_RS13245 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS13245 IPR023214 HAD superfamily DOE58_RS13245 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS13245 IPR036412 HAD-like superfamily DOE58_RS13250 IPR016956 Inner membrane protein YdjM DOE58_RS13250 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE58_RS13255 IPR001991 Sodium:dicarboxylate symporter DOE58_RS13255 IPR036458 Sodium:dicarboxylate symporter superfamily DOE58_RS13260 IPR038463 CedA-like superfamily DOE58_RS13260 IPR019666 Cell division activator CedA DOE58_RS13265 IPR024708 Catalase active site DOE58_RS13265 IPR024712 Catalase, mono-functional, haem-containing, clade 2 DOE58_RS13265 IPR041399 Large catalase, C-terminal domain DOE58_RS13265 IPR010582 Catalase immune-responsive domain DOE58_RS13265 IPR011614 Catalase core domain DOE58_RS13265 IPR037060 Catalase core domain superfamily DOE58_RS13265 IPR002226 Catalase haem-binding site DOE58_RS13265 IPR020835 Catalase superfamily DOE58_RS13265 IPR018028 Catalase, mono-functional, haem-containing DOE58_RS13265 IPR029062 Class I glutamine amidotransferase-like DOE58_RS13270 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS13270 IPR006879 Carbohydrate deacetylase YdjC-like DOE58_RS13270 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria DOE58_RS13275 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13275 IPR019802 Glycoside hydrolase, family 4, conserved site DOE58_RS13275 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE58_RS13275 IPR022616 Glycosyl hydrolase, family 4, C-terminal DOE58_RS13275 IPR001088 Glycoside hydrolase, family 4 DOE58_RS13280 IPR009057 Homeobox-like domain superfamily DOE58_RS13280 IPR013096 Cupin 2, conserved barrel DOE58_RS13280 IPR011051 RmlC-like cupin domain superfamily DOE58_RS13280 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS13280 IPR014710 RmlC-like jelly roll fold DOE58_RS13280 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS13280 IPR018062 HTH domain AraC-type, conserved site DOE58_RS13285 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit DOE58_RS13285 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily DOE58_RS13290 IPR003352 Phosphotransferase system, EIIC DOE58_RS13290 IPR004501 Phosphotransferase system, EIIC component, type 3 DOE58_RS13290 IPR004796 Phosphotransferase system, cellobiose-type IIC component DOE58_RS13295 IPR013012 Phosphotransferase system, EIIB component, type 3 DOE58_RS13295 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS13295 IPR036095 PTS system IIB component-like superfamily DOE58_RS13305 IPR037873 BamE-like DOE58_RS13305 IPR007450 Lipoprotein SmpA/OmlA DOE58_RS13310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS13310 IPR022926 NH(3)-dependent NAD(+) synthetase DOE58_RS13310 IPR003694 NAD(+) synthetase DOE58_RS13310 IPR022310 NAD/GMP synthase DOE58_RS13315 IPR035901 GIY-YIG endonuclease superfamily DOE58_RS13315 IPR000305 GIY-YIG endonuclease DOE58_RS13320 IPR012899 LTXXQ motif family protein DOE58_RS13330 IPR016681 Succinylglutamate desuccinylase DOE58_RS13330 IPR007036 Succinylglutamate desuccinylase/aspartoacylase DOE58_RS13335 IPR037031 Succinylarginine dihydrolase superfamily DOE58_RS13335 IPR007079 Succinylarginine dihydrolase DOE58_RS13340 IPR015590 Aldehyde dehydrogenase domain DOE58_RS13340 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS13340 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS13340 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS13340 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS13340 IPR017649 Succinylglutamate-semialdehyde dehydrogenase DOE58_RS13340 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS13345 IPR017650 Arginine N-succinyltransferase DOE58_RS13345 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS13345 IPR007041 Arginine N-succinyltransferase AstA/AruG DOE58_RS13350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS13350 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS13350 IPR026330 Succinylornithine transaminase DOE58_RS13350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS13350 IPR005814 Aminotransferase class-III DOE58_RS13350 IPR004636 Acetylornithine/Succinylornithine transaminase family DOE58_RS13350 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DOE58_RS13360 IPR004808 AP endonuclease 1 DOE58_RS13360 IPR037493 Exodeoxyribonuclease III-like DOE58_RS13360 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE58_RS13360 IPR020848 AP endonuclease 1, conserved site DOE58_RS13360 IPR005135 Endonuclease/exonuclease/phosphatase DOE58_RS13360 IPR020847 AP endonuclease 1, binding site DOE58_RS13365 IPR000086 NUDIX hydrolase domain DOE58_RS13365 IPR020476 NUDIX hydrolase DOE58_RS13365 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS13365 IPR020084 NUDIX hydrolase, conserved site DOE58_RS13370 IPR009971 Protein of unknown function DUF1496 DOE58_RS13375 IPR014362 Glutamate dehydrogenase DOE58_RS13375 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DOE58_RS13375 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DOE58_RS13375 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DOE58_RS13375 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DOE58_RS13375 IPR033524 Leu/Phe/Val dehydrogenases active site DOE58_RS13375 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13380 IPR000380 DNA topoisomerase, type IA DOE58_RS13380 IPR034144 DNA topoisomerase 3-like, TOPRIM domain DOE58_RS13380 IPR006171 TOPRIM domain DOE58_RS13380 IPR005738 DNA topoisomerase III DOE58_RS13380 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DOE58_RS13380 IPR023405 DNA topoisomerase, type IA, core domain DOE58_RS13380 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE58_RS13380 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE58_RS13380 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE58_RS13380 IPR013497 DNA topoisomerase, type IA, central DOE58_RS13380 IPR003601 DNA topoisomerase, type IA, domain 2 DOE58_RS13380 IPR023406 DNA topoisomerase, type IA, active site DOE58_RS13385 IPR036676 PurM-like, C-terminal domain superfamily DOE58_RS13385 IPR010918 PurM-like, C-terminal domain DOE58_RS13385 IPR016188 PurM-like, N-terminal domain DOE58_RS13385 IPR036921 PurM-like, N-terminal domain superfamily DOE58_RS13385 IPR023061 Selenophosphate synthetase, class I DOE58_RS13385 IPR004536 Selenophosphate synthetase DOE58_RS13390 IPR000415 Nitroreductase-like DOE58_RS13390 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DOE58_RS13390 IPR029479 Nitroreductase DOE58_RS13395 IPR033854 Signal peptide peptidase A DOE58_RS13395 IPR002142 Peptidase S49 DOE58_RS13395 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS13395 IPR004634 Peptidase S49, protease IV DOE58_RS13395 IPR004635 Peptidase S49, SppA DOE58_RS13400 IPR037152 L-asparaginase, N-terminal domain superfamily DOE58_RS13400 IPR020827 Asparaginase/glutaminase, active site 1 DOE58_RS13400 IPR006034 Asparaginase/glutaminase-like DOE58_RS13400 IPR041725 Type I (cytosolic) L-asparaginase DOE58_RS13400 IPR006033 Type I L-asparaginase family DOE58_RS13400 IPR027475 Asparaginase/glutaminase, active site 2 DOE58_RS13400 IPR040919 Asparaginase/glutaminase, C-terminal DOE58_RS13400 IPR027473 L-asparaginase, C-terminal DOE58_RS13400 IPR036152 Asparaginase/glutaminase-like superfamily DOE58_RS13400 IPR027474 L-asparaginase, N-terminal DOE58_RS13405 IPR000868 Isochorismatase-like DOE58_RS13405 IPR036380 Isochorismatase-like superfamily DOE58_RS13410 IPR020846 Major facilitator superfamily domain DOE58_RS13410 IPR005828 Major facilitator, sugar transporter-like DOE58_RS13410 IPR036259 MFS transporter superfamily DOE58_RS13415 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS13415 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS13415 IPR037171 NagB/RpiA transferase-like DOE58_RS13415 IPR001034 DeoR-type HTH domain DOE58_RS13415 IPR014036 DeoR C-terminal sensor domain DOE58_RS13415 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS13420 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS13420 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS13420 IPR020471 Aldo/keto reductase DOE58_RS13425 IPR011611 Carbohydrate kinase PfkB DOE58_RS13425 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS13425 IPR002139 Ribokinase/fructokinase DOE58_RS13425 IPR029056 Ribokinase-like DOE58_RS13430 IPR013785 Aldolase-type TIM barrel DOE58_RS13430 IPR000771 Fructose-bisphosphate aldolase, class-II DOE58_RS13435 IPR011032 GroES-like superfamily DOE58_RS13435 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS13435 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13435 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS13435 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS13435 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS13440 IPR020846 Major facilitator superfamily domain DOE58_RS13440 IPR005828 Major facilitator, sugar transporter-like DOE58_RS13440 IPR036259 MFS transporter superfamily DOE58_RS13445 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS13445 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS13445 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13445 IPR011032 GroES-like superfamily DOE58_RS13445 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS13455 IPR009749 Protein of unknown function DUF1315 DOE58_RS13460 IPR028427 Peptide methionine sulfoxide reductase DOE58_RS13460 IPR002579 Peptide methionine sulphoxide reductase MrsB DOE58_RS13460 IPR011057 Mss4-like superfamily DOE58_RS13465 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DOE58_RS13465 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DOE58_RS13465 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DOE58_RS13465 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DOE58_RS13465 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DOE58_RS13465 IPR036291 NAD(P)-binding domain superfamily DOE58_RS13475 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE58_RS13475 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS13475 IPR025532 Glucose-6-phosphate 1-epimerase DOE58_RS13475 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE58_RS13480 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS13480 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS13480 IPR020471 Aldo/keto reductase DOE58_RS13485 IPR007197 Radical SAM DOE58_RS13485 IPR013785 Aldolase-type TIM barrel DOE58_RS13485 IPR023885 4Fe4S-binding SPASM domain DOE58_RS13485 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE58_RS13490 IPR010583 MltA-interacting MipA DOE58_RS13495 IPR013153 PrkA AAA domain DOE58_RS13495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS13495 IPR010650 PrkA C-terminal domain DOE58_RS13495 IPR016230 Serine-protein kinase, PrkA DOE58_RS13500 IPR006698 Uncharacterised protein family UPF0229 DOE58_RS13505 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 DOE58_RS13505 IPR029787 Nucleotide cyclase DOE58_RS13505 IPR000160 GGDEF domain DOE58_RS13510 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE58_RS13510 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE58_RS13520 IPR007382 Uncharacterised protein family UPF0756, transmembrame DOE58_RS13525 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS13525 IPR018062 HTH domain AraC-type, conserved site DOE58_RS13525 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS13525 IPR009057 Homeobox-like domain superfamily DOE58_RS13525 IPR011051 RmlC-like cupin domain superfamily DOE58_RS13525 IPR014710 RmlC-like jelly roll fold DOE58_RS13530 IPR036259 MFS transporter superfamily DOE58_RS13530 IPR020846 Major facilitator superfamily domain DOE58_RS13530 IPR011701 Major facilitator superfamily DOE58_RS13530 IPR004747 Cyanate transport system protein DOE58_RS13535 IPR007438 Protein of unknown function DUF488 DOE58_RS13545 IPR005590 Protein of unknown function DUF333 DOE58_RS13555 IPR007341 Transglycosylase-associated protein DOE58_RS13570 IPR015051 Protein YoaG DOE58_RS13570 IPR036489 YoaG superfamily DOE58_RS13575 IPR014710 RmlC-like jelly roll fold DOE58_RS13575 IPR014510 Tellurite resistance predicted, YeaR DOE58_RS13575 IPR015392 Domain of unknown function DUF1971 DOE58_RS13585 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS13590 IPR036263 Chorismate mutase type II superfamily DOE58_RS13590 IPR008240 Chorismate mutase, periplasmic DOE58_RS13590 IPR002701 Chorismate mutase II, prokaryotic-type DOE58_RS13605 IPR000551 MerR-type HTH domain DOE58_RS13605 IPR009061 Putative DNA-binding domain superfamily DOE58_RS13605 IPR011789 Cu(I)-responsive transcriptional regulator DOE58_RS13605 IPR015358 Transcription regulator MerR, DNA binding DOE58_RS13615 IPR024172 Streptomycin 3''-adenylyltransferase DOE58_RS13615 IPR025184 Domain of unknown function DUF4111 DOE58_RS13615 IPR002934 Polymerase, nucleotidyl transferase domain DOE58_RS13620 IPR015304 ZinT domain DOE58_RS13620 IPR012674 Calycin DOE58_RS13635 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS13635 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE58_RS13635 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS13635 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS13635 IPR006685 Mechanosensitive ion channel MscS DOE58_RS13635 IPR010920 LSM domain superfamily DOE58_RS13640 IPR014137 Nickel import ATP-binding protein NikE DOE58_RS13640 IPR017871 ABC transporter, conserved site DOE58_RS13640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS13640 IPR015858 ABC transporter, nickel import, NikE DOE58_RS13640 IPR003593 AAA+ ATPase domain DOE58_RS13640 IPR003439 ABC transporter-like DOE58_RS13645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS13645 IPR014138 Nickel import ATP-binding protein NikD DOE58_RS13645 IPR003439 ABC transporter-like DOE58_RS13645 IPR003593 AAA+ ATPase domain DOE58_RS13645 IPR017871 ABC transporter, conserved site DOE58_RS13645 IPR015857 ABC transporter, nickel import, NikD DOE58_RS13650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS13650 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS13650 IPR035906 MetI-like superfamily DOE58_RS13655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS13655 IPR035906 MetI-like superfamily DOE58_RS13660 IPR023765 Solute-binding protein family 5, conserved site DOE58_RS13660 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS13660 IPR039424 Solute-binding protein family 5 DOE58_RS13660 IPR000914 Solute-binding protein family 5 domain DOE58_RS13670 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS13670 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS13685 IPR008978 HSP20-like chaperone DOE58_RS13685 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DOE58_RS13685 IPR002068 Alpha crystallin/Hsp20 domain DOE58_RS13710 IPR000758 Virulence-related outer membrane protein DOE58_RS13710 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS13730 IPR002059 Cold-shock protein, DNA-binding DOE58_RS13730 IPR011129 Cold shock domain DOE58_RS13730 IPR012156 Cold shock, CspA DOE58_RS13730 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS13730 IPR019844 Cold-shock (CSD) domain DOE58_RS13735 IPR035992 Ricin B-like lectins DOE58_RS13735 IPR000772 Ricin B, lectin domain DOE58_RS13740 IPR010391 DNA damage-inducible protein DinI-like DOE58_RS13740 IPR036687 DinI-like superfamily DOE58_RS13745 IPR005135 Endonuclease/exonuclease/phosphatase DOE58_RS13745 IPR003539 Cytolethal distending toxin B DOE58_RS13745 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE58_RS13765 IPR008992 Enterotoxin DOE58_RS13775 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOE58_RS13775 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic DOE58_RS13775 IPR024084 Isopropylmalate dehydrogenase-like domain DOE58_RS13780 IPR036590 SOS response associated peptidase-like DOE58_RS13780 IPR003738 SOS response associated peptidase (SRAP) DOE58_RS13790 IPR032674 LRR-containing bacterial E3 ligase, N-terminal DOE58_RS13790 IPR001611 Leucine-rich repeat DOE58_RS13790 IPR032675 Leucine-rich repeat domain superfamily DOE58_RS13790 IPR029487 Novel E3 ligase domain DOE58_RS13800 IPR000802 Arsenical pump membrane protein, ArsB DOE58_RS13815 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE58_RS13820 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE58_RS13820 IPR037053 Phage tail collar domain superfamily DOE58_RS13820 IPR011083 Phage tail collar domain DOE58_RS13820 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE58_RS13820 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal DOE58_RS13880 IPR021027 Transposase, putative, helix-turn-helix domain DOE58_RS13880 IPR010095 Transposase IS605, OrfB, C-terminal DOE58_RS13880 IPR001959 Probable transposase, IS891/IS1136/IS1341 DOE58_RS13900 IPR005564 Major capsid protein GpE DOE58_RS13910 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS13910 IPR004635 Peptidase S49, SppA DOE58_RS13910 IPR002142 Peptidase S49 DOE58_RS13920 IPR036626 Head-to-tail joining protein W superfamily DOE58_RS13920 IPR004174 Head-to-tail joining protein W DOE58_RS13925 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE58_RS13930 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit DOE58_RS13930 IPR009061 Putative DNA-binding domain superfamily DOE58_RS13930 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS13940 IPR007280 Peptidase, C-terminal, archaeal/bacterial DOE58_RS13945 IPR004929 Spanin, inner membrane subunit DOE58_RS13950 IPR023346 Lysozyme-like domain superfamily DOE58_RS13950 IPR002196 Glycoside hydrolase, family 24 DOE58_RS13950 IPR034690 Endolysin T4 type DOE58_RS14025 IPR002611 IstB-like ATP-binding protein DOE58_RS14025 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein DOE58_RS14025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14035 IPR037042 Putative bacterial toxin ydaT superfamily DOE58_RS14050 IPR009821 Protein of unknown function DUF1391 DOE58_RS14065 IPR010584 Exodeoxyribonuclease 8 DOE58_RS14065 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain DOE58_RS14095 IPR002104 Integrase, catalytic domain DOE58_RS14095 IPR010998 Integrase/recombinase, N-terminal DOE58_RS14095 IPR015094 Integrase, lambda-type, N-terminal DNA-binding DOE58_RS14095 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS14095 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS14095 IPR016177 DNA-binding domain superfamily DOE58_RS14100 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic DOE58_RS14100 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOE58_RS14100 IPR024084 Isopropylmalate dehydrogenase-like domain DOE58_RS14105 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS14105 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS14105 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE58_RS14105 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE58_RS14105 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE58_RS14115 IPR020084 NUDIX hydrolase, conserved site DOE58_RS14115 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS14115 IPR000086 NUDIX hydrolase domain DOE58_RS14115 IPR033713 Phosphatase NudJ DOE58_RS14115 IPR020476 NUDIX hydrolase DOE58_RS14120 IPR023382 Adenine nucleotide alpha hydrolase-like domains DOE58_RS14120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS14120 IPR004506 tRNA-specific 2-thiouridylase DOE58_RS14125 IPR035932 HflD-like superfamily DOE58_RS14125 IPR007451 High frequency lysogenization protein HflD DOE58_RS14130 IPR008948 L-Aspartase-like DOE58_RS14130 IPR022761 Fumarate lyase, N-terminal DOE58_RS14130 IPR000362 Fumarate lyase family DOE58_RS14130 IPR024083 Fumarase/histidase, N-terminal DOE58_RS14130 IPR013539 Adenylosuccinate lyase PurB, C-terminal DOE58_RS14130 IPR004769 Adenylosuccinate lyase DOE58_RS14130 IPR020557 Fumarate lyase, conserved site DOE58_RS14135 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14135 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS14135 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS14135 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS14135 IPR011006 CheY-like superfamily DOE58_RS14140 IPR003660 HAMP domain DOE58_RS14140 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS14140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS14140 IPR005467 Histidine kinase domain DOE58_RS14140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS14140 IPR015014 PhoQ Sensor DOE58_RS14140 IPR038429 PhoQ Sensor superfamily DOE58_RS14140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS14145 IPR039994 JmjC domain-containing DOE58_RS14145 IPR003347 JmjC domain DOE58_RS14155 IPR010161 Peptidase M20B, tripeptide aminopeptidase DOE58_RS14155 IPR011650 Peptidase M20, dimerisation domain DOE58_RS14155 IPR002933 Peptidase M20 DOE58_RS14155 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE58_RS14155 IPR036264 Bacterial exopeptidase dimerisation domain DOE58_RS14160 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DOE58_RS14160 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA DOE58_RS14160 IPR003439 ABC transporter-like DOE58_RS14160 IPR017871 ABC transporter, conserved site DOE58_RS14160 IPR013611 Transport-associated OB, type 2 DOE58_RS14160 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS14160 IPR003593 AAA+ ATPase domain DOE58_RS14160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS14165 IPR035906 MetI-like superfamily DOE58_RS14170 IPR010637 Sif DOE58_RS14175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS14175 IPR035906 MetI-like superfamily DOE58_RS14180 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DOE58_RS14180 IPR006059 Bacterial extracellular solute-binding protein DOE58_RS14185 IPR026590 Sirtuin family, catalytic core domain DOE58_RS14185 IPR003000 Sirtuin family DOE58_RS14185 IPR026591 Sirtuin, catalytic core small domain superfamily DOE58_RS14185 IPR027546 Sirtuin, class III DOE58_RS14185 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS14190 IPR023505 N-acetyl-D-glucosamine kinase DOE58_RS14190 IPR000600 ROK family DOE58_RS14195 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DOE58_RS14195 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type DOE58_RS14195 IPR003838 ABC transporter permease protein domain DOE58_RS14195 IPR025857 MacB-like periplasmic core domain DOE58_RS14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14200 IPR015854 ABC transporter, lipoprotein release, LolD DOE58_RS14200 IPR017871 ABC transporter, conserved site DOE58_RS14200 IPR003593 AAA+ ATPase domain DOE58_RS14200 IPR011924 Lipoprotein releasing system, ATP-binding protein DOE58_RS14200 IPR003439 ABC transporter-like DOE58_RS14205 IPR003838 ABC transporter permease protein domain DOE58_RS14205 IPR025857 MacB-like periplasmic core domain DOE58_RS14205 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DOE58_RS14210 IPR036101 CarD-like/TRCF domain superfamily DOE58_RS14210 IPR003711 CarD-like/TRCF domain DOE58_RS14210 IPR011545 DEAD/DEAH box helicase domain DOE58_RS14210 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS14210 IPR001650 Helicase, C-terminal DOE58_RS14210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14210 IPR037235 TRCF-like, C-terminal domain DOE58_RS14210 IPR005118 Transcription-repair-coupling factor, C-terminal domain DOE58_RS14210 IPR041471 UvrB, interaction domain DOE58_RS14210 IPR004576 Transcription-repair coupling factor DOE58_RS14215 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS14215 IPR041597 L,D-transpeptidase C-terminal domain DOE58_RS14215 IPR018392 LysM domain DOE58_RS14215 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS14220 IPR010854 Domain of unknown function DUF1471 DOE58_RS14220 IPR025543 Dodecin-like DOE58_RS14220 IPR036275 YdgH-like superfamily DOE58_RS14225 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS14225 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS14225 IPR009057 Homeobox-like domain superfamily DOE58_RS14230 IPR008816 Glycine zipper 2TM domain DOE58_RS14235 IPR023753 FAD/NAD(P)-binding domain DOE58_RS14235 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS14240 IPR022987 Uncharacterised protein family UPF0227 DOE58_RS14240 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DOE58_RS14240 IPR029058 Alpha/Beta hydrolase fold DOE58_RS14245 IPR017853 Glycoside hydrolase superfamily DOE58_RS14245 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DOE58_RS14245 IPR019800 Glycoside hydrolase, family 3, active site DOE58_RS14245 IPR022956 Beta-hexosaminidase, bacterial DOE58_RS14245 IPR001764 Glycoside hydrolase, family 3, N-terminal DOE58_RS14250 IPR014093 Thiamine kinase DOE58_RS14250 IPR002575 Aminoglycoside phosphotransferase DOE58_RS14250 IPR011009 Protein kinase-like domain superfamily DOE58_RS14255 IPR014094 Penicillin-binding protein activator LpoB DOE58_RS14260 IPR038483 YcfL-like superfamily DOE58_RS14260 IPR010824 Protein of unknown function DUF1425 DOE58_RS14265 IPR011146 HIT-like domain DOE58_RS14265 IPR019808 Histidine triad, conserved site DOE58_RS14265 IPR001310 Histidine triad (HIT) protein DOE58_RS14265 IPR036265 HIT-like superfamily DOE58_RS14270 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS14270 IPR010917 TonB-dependent receptor, conserved site DOE58_RS14270 IPR010105 TonB-dependent siderophore receptor DOE58_RS14270 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS14270 IPR010916 TonB box, conserved site DOE58_RS14270 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS14270 IPR039423 TonB-dependent receptor-like DOE58_RS14270 IPR012910 TonB-dependent receptor, plug domain DOE58_RS14275 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE58_RS14275 IPR003352 Phosphotransferase system, EIIC DOE58_RS14275 IPR001996 Phosphotransferase system, IIB component, type 1 DOE58_RS14275 IPR011299 PTS system glucose-specific IIBC component DOE58_RS14275 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE58_RS14275 IPR036878 Glucose permease domain IIB DOE58_RS14275 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE58_RS14280 IPR001130 TatD family DOE58_RS14280 IPR032466 Metal-dependent hydrolase DOE58_RS14280 IPR015991 Uncharacterised hydrolase TatD-type DOE58_RS14280 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE58_RS14285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14285 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE58_RS14285 IPR015199 DNA polymerase III, delta subunit, C-terminal DOE58_RS14285 IPR004622 DNA polymerase III, delta prime subunit DOE58_RS14290 IPR018095 Thymidylate kinase, conserved site DOE58_RS14290 IPR018094 Thymidylate kinase DOE58_RS14290 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14290 IPR039430 Thymidylate kinase-like domain DOE58_RS14295 IPR003770 Endolytic murein transglycosylase DOE58_RS14300 IPR001544 Aminotransferase class IV DOE58_RS14300 IPR036038 Aminotransferase-like, PLP-dependent enzymes DOE58_RS14300 IPR018300 Aminotransferase, class IV, conserved site DOE58_RS14300 IPR017824 Aminodeoxychorismate lyase, class IV DOE58_RS14305 IPR008966 Adhesion domain superfamily DOE58_RS14305 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS14305 IPR000259 Fimbrial-type adhesion domain DOE58_RS14310 IPR001829 Pili assembly chaperone, bacterial DOE58_RS14310 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS14310 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS14310 IPR013783 Immunoglobulin-like fold DOE58_RS14310 IPR008962 PapD-like superfamily DOE58_RS14310 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS14310 IPR018046 Pili assembly chaperone, conserved site DOE58_RS14315 IPR025885 PapC, N-terminal domain DOE58_RS14315 IPR037224 PapC, N-terminal domain superfamily DOE58_RS14315 IPR000015 Outer membrane usher protein DOE58_RS14315 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS14315 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS14315 IPR025949 PapC-like, C-terminal domain DOE58_RS14335 IPR014031 Beta-ketoacyl synthase, C-terminal DOE58_RS14335 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DOE58_RS14335 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOE58_RS14335 IPR014030 Beta-ketoacyl synthase, N-terminal DOE58_RS14335 IPR018201 Beta-ketoacyl synthase, active site DOE58_RS14335 IPR016039 Thiolase-like DOE58_RS14335 IPR000794 Beta-ketoacyl synthase DOE58_RS14340 IPR006162 Phosphopantetheine attachment site DOE58_RS14340 IPR009081 Phosphopantetheine binding ACP domain DOE58_RS14340 IPR036736 ACP-like superfamily DOE58_RS14340 IPR003231 Acyl carrier protein (ACP) DOE58_RS14345 IPR036291 NAD(P)-binding domain superfamily DOE58_RS14345 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS14345 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DOE58_RS14345 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS14350 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DOE58_RS14350 IPR001227 Acyl transferase domain superfamily DOE58_RS14350 IPR024925 Malonyl CoA-acyl carrier protein transacylase DOE58_RS14350 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOE58_RS14350 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE58_RS14350 IPR014043 Acyl transferase DOE58_RS14355 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DOE58_RS14355 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOE58_RS14355 IPR016039 Thiolase-like DOE58_RS14355 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DOE58_RS14360 IPR012281 Phospholipid biosynthesis protein, PlsX-like DOE58_RS14360 IPR003664 Fatty acid synthesis PlsX protein DOE58_RS14365 IPR002677 Ribosomal protein L32p DOE58_RS14365 IPR011332 Zinc-binding ribosomal protein DOE58_RS14370 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DOE58_RS14370 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DOE58_RS14375 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DOE58_RS14375 IPR029001 Inosine triphosphate pyrophosphatase-like DOE58_RS14380 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS14380 IPR002942 RNA-binding S4 domain DOE58_RS14380 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS14380 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE58_RS14380 IPR006225 Pseudouridine synthase, RluC/RluD DOE58_RS14380 IPR036986 RNA-binding S4 domain superfamily DOE58_RS14390 IPR022967 RNA-binding domain, S1 DOE58_RS14390 IPR003029 S1 domain DOE58_RS14390 IPR004659 Ribonuclease E/G DOE58_RS14390 IPR028878 Ribonuclease E DOE58_RS14390 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DOE58_RS14390 IPR021968 Polyribonucleotide phosphorylase C-terminal DOE58_RS14390 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS14395 IPR001029 Flagellin, D0/D1 domain DOE58_RS14395 IPR013384 Flagellar hook-associated protein 3 DOE58_RS14400 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14400 IPR002371 Flagellar hook-associated protein 1 DOE58_RS14400 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE58_RS14400 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14405 IPR019301 Flagellar protein FlgJ, N-terminal DOE58_RS14405 IPR013377 Peptidoglycan hydrolase FlgJ DOE58_RS14405 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DOE58_RS14410 IPR001782 Flagellar P-ring protein DOE58_RS14415 IPR000527 Flagellar L-ring protein DOE58_RS14420 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14420 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14420 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE58_RS14420 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE58_RS14420 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE58_RS14420 IPR012834 Flagellar basal-body rod FlgG DOE58_RS14425 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE58_RS14425 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE58_RS14425 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE58_RS14425 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14425 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14430 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE58_RS14430 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE58_RS14430 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE58_RS14430 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14430 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14430 IPR037058 Flagellar hook protein FlgE superfamily DOE58_RS14430 IPR011491 Flagellar hook protein FlgE DOE58_RS14435 IPR025965 FlgD Ig-like domain DOE58_RS14435 IPR025963 FlgD Tudor-like domain DOE58_RS14435 IPR005648 Flagellar hook capping protein DOE58_RS14440 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14440 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14440 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE58_RS14440 IPR006299 Flagellar basal-body rod protein FlgC DOE58_RS14445 IPR006300 Flagellar basal-body rod protein FlgB DOE58_RS14445 IPR019776 Flagellar basal body rod protein, conserved site DOE58_RS14445 IPR001444 Flagellar basal body rod protein, N-terminal DOE58_RS14455 IPR039246 Flagellar protein FlgA DOE58_RS14455 IPR013974 SAF domain DOE58_RS14455 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DOE58_RS14460 IPR007412 Anti-sigma-28 factor, FlgM DOE58_RS14460 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DOE58_RS14460 IPR035890 Anti-sigma-28 factor FlgM superfamily DOE58_RS14465 IPR036679 FlgN-like superfamily DOE58_RS14465 IPR007809 FlgN-like protein DOE58_RS14470 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE58_RS14475 IPR000683 Oxidoreductase, N-terminal DOE58_RS14475 IPR036291 NAD(P)-binding domain superfamily DOE58_RS14480 IPR007432 Protein of unknown function DUF480 DOE58_RS14480 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14480 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS14485 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS14485 IPR000182 GNAT domain DOE58_RS14490 IPR011701 Major facilitator superfamily DOE58_RS14490 IPR020846 Major facilitator superfamily domain DOE58_RS14490 IPR036259 MFS transporter superfamily DOE58_RS14490 IPR022855 Multidrug resistance protein MdtH DOE58_RS14495 IPR011767 Glutaredoxin active site DOE58_RS14495 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS14495 IPR011901 Glutaredoxin-2 DOE58_RS14495 IPR007494 Glutaredoxin 2, C-terminal DOE58_RS14495 IPR036249 Thioredoxin-like superfamily DOE58_RS14495 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS14500 IPR010835 Protein of unknown function DUF1439 DOE58_RS14505 IPR006680 Amidohydrolase-related DOE58_RS14505 IPR004721 Dihydroorotase homodimeric type DOE58_RS14505 IPR032466 Metal-dependent hydrolase DOE58_RS14505 IPR002195 Dihydroorotase, conserved site DOE58_RS14510 IPR036687 DinI-like superfamily DOE58_RS14510 IPR010391 DNA damage-inducible protein DinI-like DOE58_RS14515 IPR025730 Biofilm regulator BssS DOE58_RS14520 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS14520 IPR023493 N-methyl-L-tryptophan oxidase MTOX DOE58_RS14520 IPR006076 FAD dependent oxidoreductase DOE58_RS14525 IPR024494 Protein of unknown function DUF2770 DOE58_RS14535 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS14535 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS14540 IPR023480 Uncharacterised protein family UPF0312/YceI DOE58_RS14540 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE58_RS14540 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE58_RS14545 IPR040503 UPF0176, acylphosphatase-like domain DOE58_RS14545 IPR020936 Uncharacterised protein family UPF0176 DOE58_RS14545 IPR022111 Rhodanase, C-terminal DOE58_RS14545 IPR036873 Rhodanese-like domain superfamily DOE58_RS14545 IPR001763 Rhodanese-like domain DOE58_RS14550 IPR004960 Bacterial lipid A biosynthesis acyltransferase DOE58_RS14550 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DOE58_RS14560 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE58_RS14560 IPR011701 Major facilitator superfamily DOE58_RS14560 IPR036259 MFS transporter superfamily DOE58_RS14560 IPR020846 Major facilitator superfamily domain DOE58_RS14560 IPR023692 Multidrug resistance protein MdtG DOE58_RS14565 IPR025729 MsyB protein DOE58_RS14570 IPR010780 Protein of unknown function DUF1375 DOE58_RS14575 IPR001173 Glycosyltransferase 2-like DOE58_RS14575 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS14575 IPR023725 Glucan biosynthesis glucosyltransferase H DOE58_RS14580 IPR023704 Glucan biosynthesis protein G DOE58_RS14580 IPR014756 Immunoglobulin E-set DOE58_RS14580 IPR013783 Immunoglobulin-like fold DOE58_RS14580 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal DOE58_RS14580 IPR014438 Glucan biosynthesis protein MdoG/MdoD DOE58_RS14580 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE58_RS14580 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS14585 IPR023723 Glucan biosynthesis protein C DOE58_RS14585 IPR002656 Acyltransferase 3 DOE58_RS14590 IPR030871 Cardiolipin synthase C DOE58_RS14590 IPR025202 Phospholipase D-like domain DOE58_RS14590 IPR001736 Phospholipase D/Transphosphatidylase DOE58_RS14595 IPR002589 Macro domain DOE58_RS14595 IPR024900 O-acetyl-ADP-ribose deacetylase DOE58_RS14605 IPR014491 Curli production protein CsgC DOE58_RS14610 IPR009742 Curlin associated DOE58_RS14615 IPR009742 Curlin associated DOE58_RS14620 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14620 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS14620 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS14625 IPR018900 Curli assembly protein CsgE DOE58_RS14630 IPR018893 Type VIII secretion system, CsgF DOE58_RS14635 IPR005534 Curli production assembly/transport component CsgG DOE58_RS14640 IPR009476 Protein of unknown function DUF1097 DOE58_RS14645 IPR036411 TorD-like superfamily DOE58_RS14645 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS14645 IPR026269 Tat proofreading chaperone DmsD-type DOE58_RS14650 IPR016195 Polymerase/histidinol phosphatase-like DOE58_RS14650 IPR023710 Probable phosphatase YcdX DOE58_RS14650 IPR004013 PHP domain DOE58_RS14650 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE58_RS14655 IPR036291 NAD(P)-binding domain superfamily DOE58_RS14655 IPR023514 Glyoxylate/hydroxypyruvate reductase A DOE58_RS14655 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DOE58_RS14675 IPR004104 Oxidoreductase, C-terminal DOE58_RS14675 IPR000683 Oxidoreductase, N-terminal DOE58_RS14675 IPR036291 NAD(P)-binding domain superfamily DOE58_RS14680 IPR036259 MFS transporter superfamily DOE58_RS14680 IPR020846 Major facilitator superfamily domain DOE58_RS14680 IPR011701 Major facilitator superfamily DOE58_RS14685 IPR009331 Oligogalacturonate-specific porin DOE58_RS14690 IPR019936 Mutatrotase, YjhT-like DOE58_RS14690 IPR006652 Kelch repeat type 1 DOE58_RS14690 IPR015915 Kelch-type beta propeller DOE58_RS14695 IPR013785 Aldolase-type TIM barrel DOE58_RS14695 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase DOE58_RS14695 IPR011060 Ribulose-phosphate binding barrel DOE58_RS14705 IPR001734 Sodium/solute symporter DOE58_RS14705 IPR038377 Sodium/glucose symporter superfamily DOE58_RS14710 IPR000281 Helix-turn-helix protein RpiR DOE58_RS14710 IPR035472 RpiR-like, SIS domain DOE58_RS14710 IPR001347 Sugar isomerase (SIS) DOE58_RS14710 IPR009057 Homeobox-like domain superfamily DOE58_RS14710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14720 IPR018212 Sodium/solute symporter, conserved site DOE58_RS14720 IPR001734 Sodium/solute symporter DOE58_RS14720 IPR011851 Sodium/proline symporter DOE58_RS14720 IPR038377 Sodium/glucose symporter superfamily DOE58_RS14730 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS14730 IPR013321 Arc-type ribbon-helix-helix DOE58_RS14730 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS14730 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS14730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS14730 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DOE58_RS14730 IPR015590 Aldehyde dehydrogenase domain DOE58_RS14730 IPR025703 Bifunctional protein PutA DOE58_RS14730 IPR029041 FAD-linked oxidoreductase-like DOE58_RS14730 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DOE58_RS14730 IPR024090 Proline dehydrogenase PutA, domain I DOE58_RS14730 IPR024089 Proline dehydrogenase PutA, domain I/II DOE58_RS14730 IPR024082 Proline dehydrogenase PutA, domain II DOE58_RS14730 IPR002872 Proline dehydrogenase domain DOE58_RS14730 IPR010985 Ribbon-helix-helix DOE58_RS14730 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS14740 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS14740 IPR009057 Homeobox-like domain superfamily DOE58_RS14740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS14740 IPR013573 Transcription regulator YcdC, C-terminal DOE58_RS14740 IPR019915 Transcription regulator, pyrimidine utilisation, RutR DOE58_RS14745 IPR019626 Stress-induced protein, KGG, repeat DOE58_RS14750 IPR029039 Flavoprotein-like superfamily DOE58_RS14750 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS14750 IPR010089 Flavoprotein WrbA-like DOE58_RS14750 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic DOE58_RS14750 IPR005025 NADPH-dependent FMN reductase-like DOE58_RS14755 IPR025600 YccJ-like protein DOE58_RS14760 IPR033379 Histidine acid phosphatase active site DOE58_RS14760 IPR000560 Histidine phosphatase superfamily, clade-2 DOE58_RS14760 IPR029033 Histidine phosphatase superfamily DOE58_RS14765 IPR013766 Thioredoxin domain DOE58_RS14765 IPR017937 Thioredoxin, conserved site DOE58_RS14765 IPR036249 Thioredoxin-like superfamily DOE58_RS14765 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE58_RS14770 IPR023171 Na/H antiporter domain superfamily DOE58_RS14770 IPR004670 Na+/H+ antiporter NhaA DOE58_RS14770 IPR012336 Thioredoxin-like fold DOE58_RS14770 IPR036249 Thioredoxin-like superfamily DOE58_RS14770 IPR013766 Thioredoxin domain DOE58_RS14775 IPR022910 Thiol:disulphide interchange protein DsbD DOE58_RS14775 IPR012336 Thioredoxin-like fold DOE58_RS14775 IPR036249 Thioredoxin-like superfamily DOE58_RS14775 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DOE58_RS14775 IPR017937 Thioredoxin, conserved site DOE58_RS14775 IPR013766 Thioredoxin domain DOE58_RS14775 IPR035671 DsbD gamma DOE58_RS14775 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DOE58_RS14775 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DOE58_RS14790 IPR023859 DNA-binding protein, curved-DNA DOE58_RS14790 IPR036869 Chaperone J-domain superfamily DOE58_RS14790 IPR008971 HSP40/DnaJ peptide-binding DOE58_RS14790 IPR018253 DnaJ domain, conserved site DOE58_RS14790 IPR001623 DnaJ domain DOE58_RS14790 IPR002939 Chaperone DnaJ, C-terminal DOE58_RS14795 IPR022835 Chaperone modulatory protein CbpM DOE58_RS14805 IPR014448 Anti-adapter protein IraM DOE58_RS14810 IPR013471 Ribonuclease Z/BN DOE58_RS14810 IPR001279 Metallo-beta-lactamase DOE58_RS14810 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS14820 IPR036259 MFS transporter superfamily DOE58_RS14820 IPR020846 Major facilitator superfamily domain DOE58_RS14820 IPR011701 Major facilitator superfamily DOE58_RS14825 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS14825 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE58_RS14825 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales DOE58_RS14825 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase DOE58_RS14825 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS14830 IPR011234 Fumarylacetoacetase-like, C-terminal DOE58_RS14830 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE58_RS14830 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase DOE58_RS14840 IPR014347 Tautomerase/MIF superfamily DOE58_RS14840 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase DOE58_RS14845 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DOE58_RS14845 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase DOE58_RS14850 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS14850 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase DOE58_RS14850 IPR015590 Aldehyde dehydrogenase domain DOE58_RS14850 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS14850 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS14850 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS14850 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DOE58_RS14855 IPR011234 Fumarylacetoacetase-like, C-terminal DOE58_RS14855 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DOE58_RS14855 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit DOE58_RS14855 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit DOE58_RS14860 IPR012712 HTH-type transcriptional regulator HpaR/FarR DOE58_RS14860 IPR000835 MarR-type HTH domain DOE58_RS14860 IPR023187 Transcriptional regulator MarR-type, conserved site DOE58_RS14860 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14860 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS14865 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria DOE58_RS14865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE58_RS14865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE58_RS14865 IPR004925 HpaB/PvcC/4-BUDH DOE58_RS14865 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein DOE58_RS14865 IPR024674 HpaB/PvcC/4-BUDH N-terminal DOE58_RS14865 IPR024719 HpaB/PvcC/4-BUDH C-terminal DOE58_RS14870 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component DOE58_RS14870 IPR012349 FMN-binding split barrel DOE58_RS14870 IPR002563 Flavin reductase like domain DOE58_RS14875 IPR014306 Hydroxyisourate hydrolase DOE58_RS14875 IPR023418 Transthyretin, thyroxine binding site DOE58_RS14875 IPR000895 Transthyretin/hydroxyisourate hydrolase DOE58_RS14875 IPR023416 Transthyretin/hydroxyisourate hydrolase domain DOE58_RS14875 IPR023419 Transthyretin, conserved site DOE58_RS14875 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily DOE58_RS14880 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS14880 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS14880 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS14880 IPR011006 CheY-like superfamily DOE58_RS14880 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS14880 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS14880 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DOE58_RS14885 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS14885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS14885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS14885 IPR005467 Histidine kinase domain DOE58_RS14885 IPR006290 Heavy metal sensor kinase DOE58_RS14885 IPR003660 HAMP domain DOE58_RS14885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS14885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS14890 IPR005322 Peptidase C69, dipeptidase A DOE58_RS14900 IPR025030 Domain of unknown function DUF3950 DOE58_RS14905 IPR008108 Phosphatase IpgD/SopB DOE58_RS14910 IPR013095 Type III secretion system chaperone DOE58_RS14915 IPR001646 Pentapeptide repeat DOE58_RS14930 IPR006213 Bax inhibitor 1, conserved site DOE58_RS14930 IPR006214 Bax inhibitor 1-related DOE58_RS14935 IPR007453 Sulphur transfer protein DsrC/TusE DOE58_RS14935 IPR042072 DsrC-like protein, C-terminal domain DOE58_RS14935 IPR025526 DsrC-like domain superfamily DOE58_RS14940 IPR020456 Acylphosphatase DOE58_RS14940 IPR036046 Acylphosphatase-like domain superfamily DOE58_RS14940 IPR028627 Acylphosphatase, bacteria DOE58_RS14940 IPR017968 Acylphosphatase, conserved site DOE58_RS14940 IPR001792 Acylphosphatase-like domain DOE58_RS14945 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS14945 IPR018062 HTH domain AraC-type, conserved site DOE58_RS14945 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS14945 IPR009057 Homeobox-like domain superfamily DOE58_RS14950 IPR005247 YbhB/YbcL DOE58_RS14950 IPR036610 PEBP-like superfamily DOE58_RS14950 IPR008914 Phosphatidylethanolamine-binding protein DOE58_RS14955 IPR015947 PUA-like superfamily DOE58_RS14955 IPR002478 PUA domain DOE58_RS14955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS14955 IPR019614 S-adenosylmethionine-dependent methyltransferase DOE58_RS14955 IPR036974 PUA domain superfamily DOE58_RS14955 IPR041532 RlmI, PUA-like domain DOE58_RS14955 IPR023542 rRNA large subunit methyltransferase I DOE58_RS14960 IPR036623 Hemimethylated DNA-binding domain superfamily DOE58_RS14960 IPR022866 Heat shock protein HspQ DOE58_RS14960 IPR011722 Hemimethylated DNA-binding domain DOE58_RS14965 IPR003781 CoA-binding DOE58_RS14965 IPR036291 NAD(P)-binding domain superfamily DOE58_RS14970 IPR018635 Uncharacterised protein family UPF0319 DOE58_RS14975 IPR004363 Methylglyoxal synthase DOE58_RS14975 IPR018148 Methylglyoxal synthase, active site DOE58_RS14975 IPR011607 Methylglyoxal synthase-like domain DOE58_RS14975 IPR036914 Methylglyoxal synthase-like domain superfamily DOE58_RS14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS14980 IPR034739 UvrD/AddA helicase, N-terminal DOE58_RS14980 IPR014017 UvrD-like DNA helicase, C-terminal DOE58_RS14980 IPR000212 DNA helicase, UvrD/REP type DOE58_RS14980 IPR022161 DNA helicase IV, N-terminal domain DOE58_RS14980 IPR014016 UvrD-like helicase, ATP-binding domain DOE58_RS14985 IPR031308 Uncharacterised conserved protein UCP028777 DOE58_RS14985 IPR005185 Inner membrane component domain DOE58_RS14990 IPR032692 Integral membrane protein YccS, N-terminal DOE58_RS14990 IPR010020 Integral membrane protein, YccS/YhfK DOE58_RS14990 IPR010019 Integral membrane protein, YccS DOE58_RS14995 IPR007077 TfoX, C-terminal DOE58_RS14995 IPR007076 TfoX, N-terminal DOE58_RS14995 IPR026256 Transcriptional regulator, TfoX/Sxy-type DOE58_RS15000 IPR004596 Cell division suppressor protein, SulA DOE58_RS15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15005 IPR002368 Outer membrane protein, OmpA DOE58_RS15005 IPR006664 Outer membrane protein, bacterial DOE58_RS15005 IPR036737 OmpA-like domain superfamily DOE58_RS15005 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS15005 IPR000498 Outer membrane protein OmpA-like, transmembrane domain DOE58_RS15005 IPR006665 OmpA-like domain DOE58_RS15005 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE58_RS15010 IPR035087 MatP, N-terminal DOE58_RS15010 IPR035375 MatP, C-terminal ribbon-helix-helix domain DOE58_RS15010 IPR013321 Arc-type ribbon-helix-helix DOE58_RS15010 IPR038339 MatP, N-terminal domain superfamily DOE58_RS15010 IPR009390 Macrodomain Ter protein, MatP DOE58_RS15015 IPR008269 Peptidase S16, Lon proteolytic domain DOE58_RS15015 IPR041699 Lon protease, AAA domain DOE58_RS15015 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS15015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS15015 IPR027065 Lon protease DOE58_RS15020 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA DOE58_RS15020 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOE58_RS15020 IPR029069 HotDog domain superfamily DOE58_RS15025 IPR023200 Ribosome modulation factor domain superfamily DOE58_RS15025 IPR007040 Ribosome modulation factor DOE58_RS15030 IPR005586 ABC-type transport auxiliary lipoprotein component DOE58_RS15035 IPR003399 Mce/MlaD DOE58_RS15040 IPR007498 Intermembrane transport protein PqiA-like DOE58_RS15040 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DOE58_RS15045 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15045 IPR003593 AAA+ ATPase domain DOE58_RS15045 IPR032524 ABC transporter Uup, C-terminal DOE58_RS15045 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DOE58_RS15045 IPR032781 ABC-transporter extension domain DOE58_RS15045 IPR017871 ABC transporter, conserved site DOE58_RS15045 IPR003439 ABC transporter-like DOE58_RS15050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS15050 IPR000241 Putative RNA methylase domain DOE58_RS15050 IPR019614 S-adenosylmethionine-dependent methyltransferase DOE58_RS15050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS15050 IPR017244 Ribosomal RNA large subunit methyltransferase K/L DOE58_RS15050 IPR004114 THUMP domain DOE58_RS15055 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE58_RS15055 IPR005303 MOSC, N-terminal beta barrel DOE58_RS15055 IPR005302 Molybdenum cofactor sulfurase, C-terminal DOE58_RS15055 IPR012675 Beta-grasp domain superfamily DOE58_RS15055 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS15055 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS15055 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE58_RS15060 IPR009809 Cell division protein ZapC DOE58_RS15065 IPR001295 Dihydroorotate dehydrogenase, conserved site DOE58_RS15065 IPR005720 Dihydroorotate dehydrogenase domain DOE58_RS15065 IPR013785 Aldolase-type TIM barrel DOE58_RS15065 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DOE58_RS15065 IPR005719 Dihydroorotate dehydrogenase, class 2 DOE58_RS15070 IPR042097 Aminopeptidase N-like , N-terminal DOE58_RS15070 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DOE58_RS15070 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DOE58_RS15070 IPR012779 Peptidase M1, alanyl aminopeptidase DOE58_RS15070 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DOE58_RS15070 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DOE58_RS15070 IPR027268 Peptidase M4/M1, CTD superfamily DOE58_RS15070 IPR014782 Peptidase M1, membrane alanine aminopeptidase DOE58_RS15070 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DOE58_RS15075 IPR007229 Nicotinate phosphoribosyltransferase family DOE58_RS15075 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOE58_RS15075 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DOE58_RS15075 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DOE58_RS15075 IPR006406 Nicotinate phosphoribosyltransferase DOE58_RS15080 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE58_RS15080 IPR004522 Asparagine-tRNA ligase DOE58_RS15080 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE58_RS15080 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DOE58_RS15080 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS15080 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS15085 IPR001702 Porin, Gram-negative type DOE58_RS15085 IPR023614 Porin domain superfamily DOE58_RS15085 IPR033900 Porin domain, Gram-negative type DOE58_RS15085 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS15085 IPR001897 Porin, gammaproteobacterial DOE58_RS15090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS15090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS15090 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS15090 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE58_RS15090 IPR004839 Aminotransferase, class I/classII DOE58_RS15090 IPR000796 Aspartate/other aminotransferase DOE58_RS15095 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS15095 IPR001279 Metallo-beta-lactamase DOE58_RS15100 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS15100 IPR010275 Protein of unknown function DUF882 DOE58_RS15100 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DOE58_RS15110 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS15110 IPR002477 Peptidoglycan binding-like DOE58_RS15110 IPR036365 PGBD-like superfamily DOE58_RS15110 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS15115 IPR012090 Chromosome partition protein MukB DOE58_RS15115 IPR032520 MukB, hinge domain DOE58_RS15115 IPR007406 MukB, N-terminal domain DOE58_RS15115 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15120 IPR042037 MukE, C-terminal domain DOE58_RS15120 IPR042038 MukE, N-terminal domain DOE58_RS15120 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE DOE58_RS15125 IPR036141 MukF, middle domain superfamily DOE58_RS15125 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15125 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15125 IPR033440 Chromosome partition protein MukF, middle domain DOE58_RS15125 IPR033439 Chromosome partition protein MukF, winged-helix domain DOE58_RS15125 IPR005582 Chromosome partition protein MukF DOE58_RS15125 IPR038198 MukF, C-terminal domain superfamily DOE58_RS15125 IPR033441 Chromosome partition protein MukF, C-terminal domain DOE58_RS15130 IPR025714 Methyltransferase domain DOE58_RS15130 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase DOE58_RS15130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS15135 IPR003848 Domain of unknown function DUF218 DOE58_RS15140 IPR002575 Aminoglycoside phosphotransferase DOE58_RS15140 IPR011009 Protein kinase-like domain superfamily DOE58_RS15145 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS15145 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DOE58_RS15145 IPR003329 Acylneuraminate cytidylyltransferase DOE58_RS15150 IPR005651 Trm112-like DOE58_RS15155 IPR009351 Protein of unknown function DUF1006 DOE58_RS15160 IPR003758 Tetraacyldisaccharide 4'-kinase DOE58_RS15160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15165 IPR003439 ABC transporter-like DOE58_RS15165 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS15165 IPR003593 AAA+ ATPase domain DOE58_RS15165 IPR017871 ABC transporter, conserved site DOE58_RS15165 IPR039421 Type I protein exporter DOE58_RS15165 IPR011917 ABC transporter, lipid A export, MsbA DOE58_RS15165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15165 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS15170 IPR035681 ComA-like, MBL domain DOE58_RS15170 IPR001279 Metallo-beta-lactamase DOE58_RS15170 IPR004797 Competence protein ComEC/Rec2 DOE58_RS15170 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS15170 IPR004477 ComEC/Rec2-related protein DOE58_RS15175 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE58_RS15175 IPR020816 Histone-like DNA-binding protein, conserved site DOE58_RS15175 IPR000119 Histone-like DNA-binding protein DOE58_RS15175 IPR005685 Integration host factor, beta subunit DOE58_RS15180 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS15180 IPR003029 S1 domain DOE58_RS15180 IPR000110 Ribosomal protein S1 DOE58_RS15180 IPR022967 RNA-binding domain, S1 DOE58_RS15185 IPR011994 Cytidylate kinase domain DOE58_RS15185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15185 IPR003136 Cytidylate kinase DOE58_RS15190 IPR001915 Peptidase M48 DOE58_RS15195 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DOE58_RS15195 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DOE58_RS15195 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DOE58_RS15195 IPR036968 Enolpyruvate transferase domain superfamily DOE58_RS15195 IPR001986 Enolpyruvate transferase domain DOE58_RS15200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS15200 IPR000192 Aminotransferase class V domain DOE58_RS15200 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS15200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS15200 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE58_RS15200 IPR022278 Phosphoserine aminotransferase DOE58_RS15205 IPR007353 Protein of unknown function DUF421 DOE58_RS15205 IPR023090 UPF0702, alpha/beta domain superfamily DOE58_RS15210 IPR003776 YcaO-like domain DOE58_RS15210 IPR041080 YcaO cyclodehydratase, C-terminal DOE58_RS15215 IPR023271 Aquaporin-like DOE58_RS15215 IPR000292 Formate/nitrite transporter DOE58_RS15215 IPR024002 Formate/nitrite transporter, conserved site DOE58_RS15215 IPR023999 Formate transporter FocA, putative DOE58_RS15220 IPR004184 Pyruvate formate lyase domain DOE58_RS15220 IPR005949 Formate acetyltransferase DOE58_RS15220 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS15220 IPR001150 Glycine radical domain DOE58_RS15225 IPR022747 Salmonella outer protein D DOE58_RS15230 IPR013785 Aldolase-type TIM barrel DOE58_RS15230 IPR012838 Pyruvate formate-lyase 1 activating enzyme DOE58_RS15230 IPR012839 Organic radical enzyme activase DOE58_RS15230 IPR001989 Radical-activating enzyme, conserved site DOE58_RS15230 IPR034465 Pyruvate formate-lyase activase DOE58_RS15230 IPR007197 Radical SAM DOE58_RS15230 IPR034457 Organic radical-activating enzymes DOE58_RS15235 IPR002293 Amino acid/polyamine transporter I DOE58_RS15240 IPR020846 Major facilitator superfamily domain DOE58_RS15240 IPR023745 MSF-type transporter, YcaD DOE58_RS15240 IPR036259 MFS transporter superfamily DOE58_RS15240 IPR011701 Major facilitator superfamily DOE58_RS15245 IPR007059 DMSO reductase anchor subunit (DmsC) DOE58_RS15250 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS15250 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS15250 IPR014297 Dimethylsulphoxide reductase, chain B DOE58_RS15255 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS15255 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS15255 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS15255 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS15255 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS15255 IPR006656 Molybdopterin oxidoreductase DOE58_RS15255 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE58_RS15255 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS15255 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS15260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE58_RS15260 IPR002317 Serine-tRNA ligase, type1 DOE58_RS15260 IPR033729 Serine-tRNA ligase catalytic core domain DOE58_RS15260 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE58_RS15260 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS15260 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily DOE58_RS15260 IPR015866 Serine-tRNA synthetase, type1, N-terminal DOE58_RS15265 IPR032423 AAA C-terminal domain DOE58_RS15265 IPR003959 ATPase, AAA-type, core DOE58_RS15265 IPR021886 MgsA AAA+ ATPase C-terminal DOE58_RS15265 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE58_RS15265 IPR003593 AAA+ ATPase domain DOE58_RS15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15270 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOE58_RS15270 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria DOE58_RS15270 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DOE58_RS15275 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15275 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15275 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15275 IPR018541 FtsK gamma domain DOE58_RS15275 IPR002543 FtsK domain DOE58_RS15275 IPR041027 FtsK alpha domain DOE58_RS15275 IPR025199 DNA translocase FtsK, 4TM region DOE58_RS15280 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15280 IPR000485 AsnC-type HTH domain DOE58_RS15280 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS15280 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE58_RS15280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE58_RS15280 IPR019888 Transcription regulator AsnC-type DOE58_RS15280 IPR011008 Dimeric alpha-beta barrel DOE58_RS15290 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS15290 IPR005982 Thioredoxin reductase DOE58_RS15290 IPR023753 FAD/NAD(P)-binding domain DOE58_RS15290 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOE58_RS15295 IPR017871 ABC transporter, conserved site DOE58_RS15295 IPR003593 AAA+ ATPase domain DOE58_RS15295 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS15295 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS15295 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD DOE58_RS15295 IPR039421 Type I protein exporter DOE58_RS15295 IPR003439 ABC transporter-like DOE58_RS15295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15300 IPR003439 ABC transporter-like DOE58_RS15300 IPR003593 AAA+ ATPase domain DOE58_RS15300 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS15300 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS15300 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC DOE58_RS15300 IPR017871 ABC transporter, conserved site DOE58_RS15300 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15305 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal DOE58_RS15305 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS15305 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase DOE58_RS15315 IPR006196 RNA-binding domain, S1, IF1 type DOE58_RS15315 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS15315 IPR022967 RNA-binding domain, S1 DOE58_RS15315 IPR004368 Translation initiation factor IF-1 DOE58_RS15320 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15320 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15320 IPR000847 Transcription regulator HTH, LysR DOE58_RS15320 IPR005119 LysR, substrate-binding DOE58_RS15325 IPR012093 Pirin DOE58_RS15325 IPR008778 Pirin, C-terminal domain DOE58_RS15325 IPR003829 Pirin, N-terminal domain DOE58_RS15325 IPR014710 RmlC-like jelly roll fold DOE58_RS15325 IPR011051 RmlC-like cupin domain superfamily DOE58_RS15330 IPR000868 Isochorismatase-like DOE58_RS15330 IPR036380 Isochorismatase-like superfamily DOE58_RS15340 IPR003593 AAA+ ATPase domain DOE58_RS15340 IPR003959 ATPase, AAA-type, core DOE58_RS15340 IPR019489 Clp ATPase, C-terminal DOE58_RS15340 IPR004176 Clp, N-terminal DOE58_RS15340 IPR036628 Clp, N-terminal domain superfamily DOE58_RS15340 IPR001270 ClpA/B family DOE58_RS15340 IPR018368 ClpA/B, conserved site 1 DOE58_RS15340 IPR028299 ClpA/B, conserved site 2 DOE58_RS15340 IPR041546 ClpA/ClpB, AAA lid domain DOE58_RS15340 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15340 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DOE58_RS15345 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DOE58_RS15345 IPR003769 Adaptor protein ClpS, core DOE58_RS15345 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE58_RS15350 IPR019844 Cold-shock (CSD) domain DOE58_RS15350 IPR011129 Cold shock domain DOE58_RS15350 IPR012156 Cold shock, CspA DOE58_RS15350 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS15350 IPR012751 CspD, cold shock DOE58_RS15350 IPR002059 Cold-shock protein, DNA-binding DOE58_RS15355 IPR003439 ABC transporter-like DOE58_RS15355 IPR017871 ABC transporter, conserved site DOE58_RS15355 IPR017911 ABC transporter, macrolide export, ATP-binding domain DOE58_RS15355 IPR025857 MacB-like periplasmic core domain DOE58_RS15355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15355 IPR003838 ABC transporter permease protein domain DOE58_RS15355 IPR003593 AAA+ ATPase domain DOE58_RS15360 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS15360 IPR030190 Macrolide export protein MacA DOE58_RS15360 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS15365 IPR007488 Protein of unknown function DUF535 DOE58_RS15370 IPR006171 TOPRIM domain DOE58_RS15370 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15370 IPR022602 Protein of unknown function DUF2813 DOE58_RS15370 IPR034139 OLD protein-like, TOPRIM domain DOE58_RS15380 IPR005642 Lysine exporter LysO DOE58_RS15385 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase DOE58_RS15385 IPR010048 Hydroxylamine reductase DOE58_RS15385 IPR011254 Prismane-like superfamily DOE58_RS15385 IPR016100 Prismane, alpha-bundle DOE58_RS15385 IPR016099 Prismane-like, alpha/beta-sandwich DOE58_RS15390 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS15390 IPR000951 Phthalate dioxygenase reductase DOE58_RS15390 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS15390 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS15390 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS15390 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE58_RS15390 IPR012675 Beta-grasp domain superfamily DOE58_RS15390 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS15390 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS15395 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS15395 IPR000399 TPP-binding enzyme, conserved site DOE58_RS15395 IPR029061 Thiamin diphosphate-binding fold DOE58_RS15395 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS15395 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE58_RS15395 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS15400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS15400 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase DOE58_RS15400 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS15400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS15400 IPR023603 Threonine aldolase DOE58_RS15405 IPR036291 NAD(P)-binding domain superfamily DOE58_RS15405 IPR016040 NAD(P)-binding domain DOE58_RS15405 IPR021295 Protein of unknown function DUF2867 DOE58_RS15410 IPR036291 NAD(P)-binding domain superfamily DOE58_RS15410 IPR001509 NAD-dependent epimerase/dehydratase DOE58_RS15415 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOE58_RS15415 IPR036365 PGBD-like superfamily DOE58_RS15415 IPR036366 PGBD superfamily DOE58_RS15415 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOE58_RS15420 IPR035439 UPF0145 domain superfamily DOE58_RS15420 IPR002765 Uncharacterised protein family UPF0145 DOE58_RS15425 IPR024289 Domain of unknown function DUF3828 DOE58_RS15430 IPR003439 ABC transporter-like DOE58_RS15430 IPR017871 ABC transporter, conserved site DOE58_RS15430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15430 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS15430 IPR003593 AAA+ ATPase domain DOE58_RS15435 IPR001320 Ionotropic glutamate receptor DOE58_RS15435 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS15435 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE58_RS15435 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS15440 IPR035906 MetI-like superfamily DOE58_RS15440 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS15440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15445 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS15445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15445 IPR035906 MetI-like superfamily DOE58_RS15450 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS15450 IPR001320 Ionotropic glutamate receptor DOE58_RS15450 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE58_RS15450 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS15470 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS15475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS15475 IPR030391 RNA methyltransferase TrmA, conserved site DOE58_RS15475 IPR030390 RNA methyltransferase TrmA, active site DOE58_RS15475 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC DOE58_RS15475 IPR010280 (Uracil-5)-methyltransferase family DOE58_RS15480 IPR019703 Protein of unknown function DUF2593 DOE58_RS15485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15485 IPR035906 MetI-like superfamily DOE58_RS15490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15490 IPR035906 MetI-like superfamily DOE58_RS15495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15495 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS15495 IPR013611 Transport-associated OB, type 2 DOE58_RS15495 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DOE58_RS15495 IPR017871 ABC transporter, conserved site DOE58_RS15495 IPR003439 ABC transporter-like DOE58_RS15495 IPR003593 AAA+ ATPase domain DOE58_RS15500 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DOE58_RS15500 IPR006059 Bacterial extracellular solute-binding protein DOE58_RS15505 IPR019660 Putative sensory transduction regulator YbjN DOE58_RS15510 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS15510 IPR013651 ATP-grasp fold, RimK-type DOE58_RS15510 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DOE58_RS15510 IPR041107 RimK, PreATP-grasp domain DOE58_RS15510 IPR011761 ATP-grasp fold DOE58_RS15510 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX DOE58_RS15515 IPR029479 Nitroreductase DOE58_RS15515 IPR000415 Nitroreductase-like DOE58_RS15515 IPR016446 Flavin oxidoreductase Frp family DOE58_RS15520 IPR010815 Protein of unknown function DUF1418 DOE58_RS15525 IPR011767 Glutaredoxin active site DOE58_RS15525 IPR036249 Thioredoxin-like superfamily DOE58_RS15525 IPR011902 Glutaredoxin, GrxA DOE58_RS15525 IPR002109 Glutaredoxin DOE58_RS15525 IPR014025 Glutaredoxin subgroup DOE58_RS15530 IPR020368 Uncharacterised protein family YbjM DOE58_RS15540 IPR006512 YidE/YbjL duplication DOE58_RS15540 IPR006037 Regulator of K+ conductance, C-terminal DOE58_RS15540 IPR023017 Transport protein YbjL, putative DOE58_RS15540 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DOE58_RS15550 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS15550 IPR009057 Homeobox-like domain superfamily DOE58_RS15550 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS15555 IPR036259 MFS transporter superfamily DOE58_RS15555 IPR020846 Major facilitator superfamily domain DOE58_RS15555 IPR011701 Major facilitator superfamily DOE58_RS15560 IPR023214 HAD superfamily DOE58_RS15560 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS15560 IPR036412 HAD-like superfamily DOE58_RS15560 IPR000150 Cof family DOE58_RS15565 IPR005829 Sugar transporter, conserved site DOE58_RS15565 IPR036259 MFS transporter superfamily DOE58_RS15565 IPR020846 Major facilitator superfamily domain DOE58_RS15565 IPR011701 Major facilitator superfamily DOE58_RS15575 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE58_RS15575 IPR033879 Undecaprenyl-diphosphatase DOE58_RS15575 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE58_RS15580 IPR014036 DeoR C-terminal sensor domain DOE58_RS15580 IPR001034 DeoR-type HTH domain DOE58_RS15580 IPR037171 NagB/RpiA transferase-like DOE58_RS15580 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS15585 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE58_RS15585 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE58_RS15585 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE58_RS15585 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE58_RS15585 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS15585 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE58_RS15590 IPR010987 Glutathione S-transferase, C-terminal-like DOE58_RS15590 IPR004045 Glutathione S-transferase, N-terminal DOE58_RS15590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DOE58_RS15590 IPR004046 Glutathione S-transferase, C-terminal DOE58_RS15590 IPR036249 Thioredoxin-like superfamily DOE58_RS15595 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS15595 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase DOE58_RS15595 IPR012938 Glucose/Sorbosone dehydrogenase DOE58_RS15600 IPR020359 Biofilm regulator BssR DOE58_RS15605 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DOE58_RS15605 IPR041582 RimO, TRAM domain DOE58_RS15605 IPR013848 Methylthiotransferase, N-terminal DOE58_RS15605 IPR020612 Methylthiotransferase, conserved site DOE58_RS15605 IPR005839 Methylthiotransferase DOE58_RS15605 IPR002792 TRAM domain DOE58_RS15605 IPR023404 Radical SAM, alpha/beta horseshoe DOE58_RS15605 IPR006638 Elp3/MiaB/NifB DOE58_RS15605 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE58_RS15605 IPR007197 Radical SAM DOE58_RS15610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15610 IPR035906 MetI-like superfamily DOE58_RS15610 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE58_RS15615 IPR035906 MetI-like superfamily DOE58_RS15615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15620 IPR030678 Peptide/nickel binding protein, MppA-type DOE58_RS15620 IPR039424 Solute-binding protein family 5 DOE58_RS15620 IPR000914 Solute-binding protein family 5 domain DOE58_RS15625 IPR017871 ABC transporter, conserved site DOE58_RS15625 IPR003439 ABC transporter-like DOE58_RS15625 IPR003593 AAA+ ATPase domain DOE58_RS15625 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DOE58_RS15625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15630 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS15630 IPR000246 Peptidase T2, asparaginase 2 DOE58_RS15635 IPR036688 MoeA, C-terminal, domain IV superfamily DOE58_RS15635 IPR005111 MoeA, C-terminal, domain IV DOE58_RS15635 IPR036425 MoaB/Mog-like domain superfamily DOE58_RS15635 IPR036135 MoeA, N-terminal and linker domain superfamily DOE58_RS15635 IPR005110 MoeA, N-terminal and linker domain DOE58_RS15635 IPR001453 MoaB/Mog domain DOE58_RS15635 IPR038987 Molybdopterin biosynthesis protein MoeA-like DOE58_RS15635 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE58_RS15640 IPR035985 Ubiquitin-activating enzyme DOE58_RS15640 IPR000594 THIF-type NAD/FAD binding fold DOE58_RS15640 IPR012730 Molybdopterin synthase sulfurylase MoeB DOE58_RS15645 IPR034457 Organic radical-activating enzymes DOE58_RS15645 IPR012839 Organic radical enzyme activase DOE58_RS15645 IPR034465 Pyruvate formate-lyase activase DOE58_RS15645 IPR001989 Radical-activating enzyme, conserved site DOE58_RS15645 IPR007197 Radical SAM DOE58_RS15645 IPR013785 Aldolase-type TIM barrel DOE58_RS15650 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS15650 IPR001150 Glycine radical domain DOE58_RS15650 IPR004184 Pyruvate formate lyase domain DOE58_RS15650 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family DOE58_RS15655 IPR023214 HAD superfamily DOE58_RS15655 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS15655 IPR000150 Cof family DOE58_RS15655 IPR036412 HAD-like superfamily DOE58_RS15660 IPR010856 Protein of unknown function DUF1479 DOE58_RS15660 IPR027443 Isopenicillin N synthase-like DOE58_RS15665 IPR032781 ABC-transporter extension domain DOE58_RS15665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15665 IPR003593 AAA+ ATPase domain DOE58_RS15665 IPR003439 ABC transporter-like DOE58_RS15670 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS15670 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS15670 IPR041597 L,D-transpeptidase C-terminal domain DOE58_RS15675 IPR004680 Citrate transporter-like domain DOE58_RS15680 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15680 IPR001367 Iron dependent repressor, metal binding and dimerisation domain DOE58_RS15680 IPR022689 Iron dependent repressor DOE58_RS15680 IPR022687 DTXR-type HTH domain DOE58_RS15680 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily DOE58_RS15680 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15690 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS15690 IPR040423 Phosphoethanolamine transferase DOE58_RS15690 IPR000917 Sulfatase, N-terminal DOE58_RS15695 IPR027385 Outer membrane protein beta-barrel domain DOE58_RS15695 IPR000758 Virulence-related outer membrane protein DOE58_RS15695 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS15700 IPR000620 EamA domain DOE58_RS15705 IPR023067 DNA protection during starvation protein, gammaproteobacteria DOE58_RS15705 IPR008331 Ferritin/DPS protein domain DOE58_RS15705 IPR023188 DNA-binding protein Dps, conserved site DOE58_RS15705 IPR002177 DNA-binding protein Dps DOE58_RS15705 IPR012347 Ferritin-like DOE58_RS15705 IPR009078 Ferritin-like superfamily DOE58_RS15715 IPR001320 Ionotropic glutamate receptor DOE58_RS15715 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS15715 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS15720 IPR035906 MetI-like superfamily DOE58_RS15720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15720 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS15725 IPR017871 ABC transporter, conserved site DOE58_RS15725 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS15725 IPR003593 AAA+ ATPase domain DOE58_RS15725 IPR003439 ABC transporter-like DOE58_RS15725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15730 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS15730 IPR010920 LSM domain superfamily DOE58_RS15730 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS15730 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS15730 IPR006685 Mechanosensitive ion channel MscS DOE58_RS15735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS15735 IPR016909 Ribosomal RNA large subunit methyltransferase F DOE58_RS15735 IPR010286 METTL16/RlmF family DOE58_RS15740 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOE58_RS15740 IPR000962 Zinc finger, DksA/TraR C4-type DOE58_RS15740 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DOE58_RS15745 IPR010854 Domain of unknown function DUF1471 DOE58_RS15745 IPR036275 YdgH-like superfamily DOE58_RS15745 IPR025543 Dodecin-like DOE58_RS15750 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE58_RS15750 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE58_RS15750 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE58_RS15755 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DOE58_RS15755 IPR006555 ATP-dependent helicase, C-terminal DOE58_RS15755 IPR006554 Helicase-like, DEXD box c2 type DOE58_RS15755 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS15755 IPR001650 Helicase, C-terminal DOE58_RS15755 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15755 IPR010614 DEAD2 DOE58_RS15755 IPR039000 ATP-dependent DNA helicase DinG DOE58_RS15760 IPR028622 ATP-dependent RNA helicase RhlE DOE58_RS15760 IPR011545 DEAD/DEAH box helicase domain DOE58_RS15760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15760 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE58_RS15760 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS15760 IPR014014 RNA helicase, DEAD-box type, Q motif DOE58_RS15760 IPR001650 Helicase, C-terminal DOE58_RS15765 IPR015292 Transcription regulator YbiH, C-terminal DOE58_RS15765 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS15765 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS15765 IPR009057 Homeobox-like domain superfamily DOE58_RS15765 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS15770 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS15770 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG DOE58_RS15775 IPR003593 AAA+ ATPase domain DOE58_RS15775 IPR003439 ABC transporter-like DOE58_RS15775 IPR017871 ABC transporter, conserved site DOE58_RS15775 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15780 IPR000412 ABC-2 transporter DOE58_RS15785 IPR000412 ABC-2 transporter DOE58_RS15790 IPR021303 Uncharacterised protein family, inner membrane, YbhQ DOE58_RS15795 IPR005135 Endonuclease/exonuclease/phosphatase DOE58_RS15795 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE58_RS15800 IPR025202 Phospholipase D-like domain DOE58_RS15800 IPR001736 Phospholipase D/Transphosphatidylase DOE58_RS15800 IPR030872 Cardiolipin synthase B DOE58_RS15805 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DOE58_RS15830 IPR006214 Bax inhibitor 1-related DOE58_RS15835 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DOE58_RS15835 IPR003448 Molybdopterin biosynthesis MoaE DOE58_RS15840 IPR003749 Sulfur carrier ThiS/MoaD-like DOE58_RS15840 IPR012675 Beta-grasp domain superfamily DOE58_RS15840 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE58_RS15845 IPR023045 Molybdenum cofactor biosynthesis C DOE58_RS15845 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain DOE58_RS15845 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily DOE58_RS15850 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE58_RS15850 IPR001453 MoaB/Mog domain DOE58_RS15850 IPR036425 MoaB/Mog-like domain superfamily DOE58_RS15850 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria DOE58_RS15850 IPR012245 Molybdenum cofactor biosynthesis protein MoaB DOE58_RS15855 IPR013785 Aldolase-type TIM barrel DOE58_RS15855 IPR013483 Molybdenum cofactor biosynthesis protein A DOE58_RS15855 IPR006638 Elp3/MiaB/NifB DOE58_RS15855 IPR010505 Molybdenum cofactor synthesis C-terminal DOE58_RS15855 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DOE58_RS15855 IPR007197 Radical SAM DOE58_RS15860 IPR010119 Gluconeogenesis factor DOE58_RS15860 IPR038136 Gluconeogenesis factor superfamily DOE58_RS15860 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DOE58_RS15865 IPR001611 Leucine-rich repeat DOE58_RS15865 IPR029487 Novel E3 ligase domain DOE58_RS15865 IPR032674 LRR-containing bacterial E3 ligase, N-terminal DOE58_RS15865 IPR032675 Leucine-rich repeat domain superfamily DOE58_RS15865 IPR003591 Leucine-rich repeat, typical subtype DOE58_RS15875 IPR001650 Helicase, C-terminal DOE58_RS15875 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS15875 IPR036876 UVR domain superfamily DOE58_RS15875 IPR004807 UvrABC system, subunit B DOE58_RS15875 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15875 IPR001943 UVR domain DOE58_RS15875 IPR024759 UvrB, YAD/RRR-motif-containing domain DOE58_RS15875 IPR006935 Helicase/UvrB, N-terminal DOE58_RS15875 IPR041471 UvrB, interaction domain DOE58_RS15885 IPR004472 Dethiobiotin synthase BioD DOE58_RS15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15890 IPR013216 Methyltransferase type 11 DOE58_RS15890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS15890 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DOE58_RS15895 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS15895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS15895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS15895 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria DOE58_RS15895 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DOE58_RS15895 IPR004839 Aminotransferase, class I/classII DOE58_RS15895 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DOE58_RS15900 IPR024177 Biotin synthase DOE58_RS15900 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DOE58_RS15900 IPR010722 Biotin and thiamin synthesis-associated domain DOE58_RS15900 IPR013785 Aldolase-type TIM barrel DOE58_RS15900 IPR007197 Radical SAM DOE58_RS15900 IPR006638 Elp3/MiaB/NifB DOE58_RS15905 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS15905 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DOE58_RS15905 IPR005814 Aminotransferase class-III DOE58_RS15905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS15905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS15910 IPR008914 Phosphatidylethanolamine-binding protein DOE58_RS15910 IPR036610 PEBP-like superfamily DOE58_RS15910 IPR005247 YbhB/YbcL DOE58_RS15915 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DOE58_RS15915 IPR008948 L-Aspartase-like DOE58_RS15915 IPR005921 Histidine ammonia-lyase DOE58_RS15915 IPR024083 Fumarase/histidase, N-terminal DOE58_RS15915 IPR001106 Aromatic amino acid lyase DOE58_RS15920 IPR023637 Urocanase DOE58_RS15920 IPR035401 Urocanase, C-terminal domain DOE58_RS15920 IPR038364 Urocanase, central domain superfamily DOE58_RS15920 IPR023636 Urocanase conserved site DOE58_RS15920 IPR035400 Urocanase, N-terminal domain DOE58_RS15920 IPR035085 Urocanase, Rossmann-like domain DOE58_RS15920 IPR036190 Urocanase superfamily DOE58_RS15925 IPR011663 UbiC transcription regulator-associated DOE58_RS15925 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS15925 IPR010248 Histidine utilization repressor DOE58_RS15925 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15925 IPR000524 Transcription regulator HTH, GntR DOE58_RS15925 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15930 IPR023696 Ureohydrolase domain superfamily DOE58_RS15930 IPR005923 Formiminoglutamase DOE58_RS15930 IPR006035 Ureohydrolase DOE58_RS15935 IPR005920 Imidazolonepropionase DOE58_RS15935 IPR006680 Amidohydrolase-related DOE58_RS15935 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS15935 IPR032466 Metal-dependent hydrolase DOE58_RS15940 IPR033131 Pectinesterase, Asp active site DOE58_RS15940 IPR000070 Pectinesterase, catalytic DOE58_RS15940 IPR011050 Pectin lyase fold/virulence factor DOE58_RS15940 IPR012334 Pectin lyase fold DOE58_RS15945 IPR011045 Nitrous oxide reductase, N-terminal DOE58_RS15945 IPR022528 6-phosphogluconolactonase, YbhE-type DOE58_RS15945 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DOE58_RS15945 IPR019405 Lactonase, 7-bladed beta propeller DOE58_RS15950 IPR000150 Cof family DOE58_RS15950 IPR036412 HAD-like superfamily DOE58_RS15950 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS15950 IPR023214 HAD superfamily DOE58_RS15955 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS15955 IPR004606 Molybdenum-pterin binding DOE58_RS15955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15955 IPR005116 Transport-associated OB, type 1 DOE58_RS15955 IPR015852 ABC transporter, molybdenum import, ModC DOE58_RS15955 IPR017871 ABC transporter, conserved site DOE58_RS15955 IPR003439 ABC transporter-like DOE58_RS15955 IPR003593 AAA+ ATPase domain DOE58_RS15955 IPR011868 Molybdate ABC transporter, ATP-binding protein DOE58_RS15960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS15960 IPR035906 MetI-like superfamily DOE58_RS15960 IPR011867 Molybdate ABC transporter, permease protein DOE58_RS15965 IPR005950 Molybdate ABC transporter, substrate-binding protein DOE58_RS15970 IPR019702 Multidrug efflux pump accessory protein AcrZ DOE58_RS15975 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS15975 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS15975 IPR000847 Transcription regulator HTH, LysR DOE58_RS15975 IPR005116 Transport-associated OB, type 1 DOE58_RS15975 IPR003725 Molybdenum-binding protein ModE, N-terminal DOE58_RS15975 IPR016462 Molybdate-dependent transcriptional regulator ModE DOE58_RS15975 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS15975 IPR004606 Molybdenum-pterin binding DOE58_RS15980 IPR003593 AAA+ ATPase domain DOE58_RS15980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS15980 IPR003439 ABC transporter-like DOE58_RS15990 IPR016040 NAD(P)-binding domain DOE58_RS15990 IPR005886 UDP-glucose 4-epimerase DOE58_RS15990 IPR036291 NAD(P)-binding domain superfamily DOE58_RS15995 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal DOE58_RS15995 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site DOE58_RS15995 IPR001937 Galactose-1-phosphate uridyl transferase, class I DOE58_RS15995 IPR036265 HIT-like superfamily DOE58_RS15995 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal DOE58_RS16000 IPR036554 GHMP kinase, C-terminal domain superfamily DOE58_RS16000 IPR006204 GHMP kinase N-terminal domain DOE58_RS16000 IPR006203 GHMP kinase, ATP-binding, conserved site DOE58_RS16000 IPR006206 Mevalonate/galactokinase DOE58_RS16000 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS16000 IPR019741 Galactokinase, conserved site DOE58_RS16000 IPR019539 Galactokinase galactose-binding domain DOE58_RS16000 IPR022963 Galactokinase, bacterial DOE58_RS16000 IPR000705 Galactokinase DOE58_RS16000 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS16000 IPR013750 GHMP kinase, C-terminal domain DOE58_RS16005 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE58_RS16005 IPR018052 Aldose 1-epimerase, conserved site DOE58_RS16005 IPR013458 Aldose 1-epimerase, bacterial DOE58_RS16005 IPR015443 Aldose 1-epimerase DOE58_RS16005 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE58_RS16005 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS16015 IPR005952 Phosphoglycerate mutase 1 DOE58_RS16015 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE58_RS16015 IPR029033 Histidine phosphatase superfamily DOE58_RS16015 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS16020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16020 IPR003439 ABC transporter-like DOE58_RS16020 IPR017871 ABC transporter, conserved site DOE58_RS16020 IPR003593 AAA+ ATPase domain DOE58_RS16025 IPR000522 ABC transporter, permease protein, BtuC-like DOE58_RS16025 IPR037294 ABC transporter, BtuC-like DOE58_RS16030 IPR013785 Aldolase-type TIM barrel DOE58_RS16030 IPR006219 DHAP synthase, class 1 DOE58_RS16030 IPR006218 DAHP synthetase I/KDSA DOE58_RS16035 IPR020363 Uncharacterised protein family YbgS DOE58_RS16040 IPR002524 Cation efflux protein DOE58_RS16040 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOE58_RS16040 IPR027469 Cation efflux transmembrane domain superfamily DOE58_RS16040 IPR023500 Zinc transporter ZitB DOE58_RS16045 IPR006419 Nicotinamide mononucleotide transporter PnuC DOE58_RS16050 IPR023513 Quinolinate synthase A, type 1 DOE58_RS16050 IPR036094 Quinolinate synthetase A superfamily DOE58_RS16050 IPR003473 Quinolinate synthetase A DOE58_RS16085 IPR034706 Cell division coordinator CpoB DOE58_RS16085 IPR014162 Cell division coordinator CpoB, C-terminal DOE58_RS16085 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS16085 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS16085 IPR019734 Tetratricopeptide repeat DOE58_RS16085 IPR032519 YbgF, trimerisation domain DOE58_RS16090 IPR039001 Peptidoglycan-associated lipoprotein DOE58_RS16090 IPR006665 OmpA-like domain DOE58_RS16090 IPR036737 OmpA-like domain superfamily DOE58_RS16090 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE58_RS16090 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal DOE58_RS16090 IPR006664 Outer membrane protein, bacterial DOE58_RS16095 IPR036752 TolB, N-terminal domain superfamily DOE58_RS16095 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS16095 IPR007195 TolB, N-terminal DOE58_RS16095 IPR014167 Tol-Pal system protein TolB DOE58_RS16095 IPR011659 WD40-like Beta Propeller DOE58_RS16100 IPR014161 Tol-Pal system, TolA DOE58_RS16105 IPR014168 Tol-Pal system protein TolR DOE58_RS16105 IPR003400 Biopolymer transport protein ExbD/TolR DOE58_RS16110 IPR002898 MotA/TolQ/ExbB proton channel DOE58_RS16110 IPR014163 Tol-Pal system, TolQ DOE58_RS16115 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DOE58_RS16115 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOE58_RS16115 IPR006683 Thioesterase domain DOE58_RS16115 IPR029069 HotDog domain superfamily DOE58_RS16115 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site DOE58_RS16120 IPR011846 Cyd operon protein YbgE DOE58_RS16125 IPR012994 Membrane bound YbgT-like DOE58_RS16125 IPR011724 Cyd operon protein YbgT DOE58_RS16130 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE58_RS16135 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE58_RS16140 IPR005810 Succinyl-CoA ligase, alpha subunit DOE58_RS16140 IPR016102 Succinyl-CoA synthetase-like DOE58_RS16140 IPR036291 NAD(P)-binding domain superfamily DOE58_RS16140 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOE58_RS16140 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DOE58_RS16140 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DOE58_RS16140 IPR003781 CoA-binding DOE58_RS16145 IPR016102 Succinyl-CoA synthetase-like DOE58_RS16145 IPR005809 Succinate--CoA synthetase, beta subunit DOE58_RS16145 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DOE58_RS16145 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS16145 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DOE58_RS16145 IPR011761 ATP-grasp fold DOE58_RS16145 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DOE58_RS16150 IPR011053 Single hybrid motif DOE58_RS16150 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE58_RS16150 IPR006255 Dihydrolipoamide succinyltransferase DOE58_RS16150 IPR004167 Peripheral subunit-binding domain DOE58_RS16150 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOE58_RS16150 IPR036625 E3-binding domain superfamily DOE58_RS16150 IPR000089 Biotin/lipoyl attachment DOE58_RS16150 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE58_RS16155 IPR001017 Dehydrogenase, E1 component DOE58_RS16155 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal DOE58_RS16155 IPR011603 2-oxoglutarate dehydrogenase E1 component DOE58_RS16155 IPR005475 Transketolase-like, pyrimidine-binding domain DOE58_RS16155 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain DOE58_RS16155 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily DOE58_RS16155 IPR029061 Thiamin diphosphate-binding fold DOE58_RS16160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS16160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS16160 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS16160 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DOE58_RS16160 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DOE58_RS16160 IPR009051 Alpha-helical ferredoxin DOE58_RS16160 IPR012675 Beta-grasp domain superfamily DOE58_RS16160 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS16165 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS16165 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DOE58_RS16165 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE58_RS16165 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE58_RS16165 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE58_RS16165 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE58_RS16165 IPR011281 Succinate dehydrogenase, flavoprotein subunit DOE58_RS16165 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DOE58_RS16170 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE58_RS16170 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor DOE58_RS16170 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOE58_RS16175 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site DOE58_RS16175 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit DOE58_RS16175 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DOE58_RS16175 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE58_RS16190 IPR019810 Citrate synthase active site DOE58_RS16190 IPR016142 Citrate synthase-like, large alpha subdomain DOE58_RS16190 IPR002020 Citrate synthase DOE58_RS16190 IPR024176 Citrate synthase, bacterial-type DOE58_RS16190 IPR016143 Citrate synthase-like, small alpha subdomain DOE58_RS16190 IPR010953 Citrate synthase, type I DOE58_RS16190 IPR036969 Citrate synthase superfamily DOE58_RS16195 IPR017516 AbrB duplication DOE58_RS16195 IPR007820 AbrB family DOE58_RS16200 IPR010979 Ribosomal protein S13-like, H2TH DOE58_RS16200 IPR035937 MutM-like, N-terminal DOE58_RS16200 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DOE58_RS16200 IPR010663 Zinc finger, FPG/IleRS-type DOE58_RS16200 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DOE58_RS16200 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DOE58_RS16200 IPR023713 Endonuclease VIII DOE58_RS16200 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DOE58_RS16220 IPR040492 Galactofuranosyltransferase GlfT2, N-terminal DOE58_RS16220 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS16225 IPR003439 ABC transporter-like DOE58_RS16225 IPR003593 AAA+ ATPase domain DOE58_RS16225 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16230 IPR013525 ABC-2 type transporter DOE58_RS16245 IPR015899 UDP-galactopyranose mutase, C-terminal DOE58_RS16245 IPR004379 UDP-galactopyranose mutase DOE58_RS16260 IPR002104 Integrase, catalytic domain DOE58_RS16260 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS16260 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS16270 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS16270 IPR005501 LamB/YcsF/PxpA-like DOE58_RS16275 IPR003778 Carboxyltransferase domain, subdomain A and B DOE58_RS16275 IPR029000 Cyclophilin-like domain superfamily DOE58_RS16280 IPR003833 Carboxyltransferase domain, subdomain C and D DOE58_RS16280 IPR010016 KipI family DOE58_RS16280 IPR029000 Cyclophilin-like domain superfamily DOE58_RS16285 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DOE58_RS16285 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DOE58_RS16295 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site DOE58_RS16295 IPR023777 Amino acid/peptide transporter family, dipeptide permease D DOE58_RS16295 IPR005279 Dipeptide/tripeptide permease DOE58_RS16295 IPR020846 Major facilitator superfamily domain DOE58_RS16295 IPR036259 MFS transporter superfamily DOE58_RS16295 IPR000109 Proton-dependent oligopeptide transporter family DOE58_RS16300 IPR006050 DNA photolyase, N-terminal DOE58_RS16300 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DOE58_RS16300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16300 IPR002081 Cryptochrome/DNA photolyase class 1 DOE58_RS16300 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain DOE58_RS16300 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily DOE58_RS16300 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily DOE58_RS16305 IPR019663 Uncharacterised protein YbfA DOE58_RS16310 IPR011726 K+ transporting P-type ATPase, F subunit DOE58_RS16315 IPR004623 Potassium-transporting ATPase A chain DOE58_RS16320 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS16320 IPR001757 P-type ATPase DOE58_RS16320 IPR006391 P-type ATPase, B chain, subfamily IA DOE58_RS16320 IPR036412 HAD-like superfamily DOE58_RS16320 IPR008250 P-type ATPase, A domain superfamily DOE58_RS16320 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS16320 IPR018303 P-type ATPase, phosphorylation site DOE58_RS16325 IPR003820 Potassium-transporting ATPase C chain DOE58_RS16330 IPR029016 GAF-like domain superfamily DOE58_RS16330 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS16330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS16330 IPR025201 Sensor protein KdpD, transmembrane domain DOE58_RS16330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS16330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS16330 IPR038318 KdpD, transmembrane domain superfamily DOE58_RS16330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS16330 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DOE58_RS16330 IPR005467 Histidine kinase domain DOE58_RS16330 IPR003018 GAF domain DOE58_RS16335 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS16335 IPR011006 CheY-like superfamily DOE58_RS16335 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS16335 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS16335 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16340 IPR021237 Protein of unknown function DUF2618 DOE58_RS16345 IPR027464 Ornithine decarboxylase, N-terminal DOE58_RS16345 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE58_RS16345 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE58_RS16345 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS16345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS16345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS16345 IPR011006 CheY-like superfamily DOE58_RS16345 IPR011193 Ornithine/lysine/arginine decarboxylase DOE58_RS16345 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE58_RS16345 IPR027568 Ornithine decarboxylase SpeF DOE58_RS16345 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE58_RS16350 IPR027566 Putrescine transporter PotE DOE58_RS16350 IPR004754 Amino acid antiporter DOE58_RS16350 IPR002293 Amino acid/polyamine transporter I DOE58_RS16360 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DOE58_RS16360 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DOE58_RS16360 IPR005843 Alpha-D-phosphohexomutase, C-terminal DOE58_RS16360 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DOE58_RS16360 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DOE58_RS16360 IPR016066 Alpha-D-phosphohexomutase, conserved site DOE58_RS16360 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DOE58_RS16360 IPR005852 Phosphoglucomutase, alpha-D-glucose specific DOE58_RS16365 IPR010985 Ribbon-helix-helix DOE58_RS16365 IPR005621 Negative modulator of initiation of replication SeqA DOE58_RS16365 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain DOE58_RS16365 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily DOE58_RS16365 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal DOE58_RS16365 IPR013321 Arc-type ribbon-helix-helix DOE58_RS16370 IPR000073 Alpha/beta hydrolase fold-1 DOE58_RS16370 IPR029058 Alpha/Beta hydrolase fold DOE58_RS16375 IPR002145 Ribbon-helix-helix protein, CopG DOE58_RS16375 IPR010985 Ribbon-helix-helix DOE58_RS16380 IPR029039 Flavoprotein-like superfamily DOE58_RS16380 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS16380 IPR001226 Flavodoxin, conserved site DOE58_RS16380 IPR010086 Flavodoxin, long chain DOE58_RS16385 IPR002481 Ferric-uptake regulator DOE58_RS16385 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS16385 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16390 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16390 IPR000847 Transcription regulator HTH, LysR DOE58_RS16390 IPR005119 LysR, substrate-binding DOE58_RS16390 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS16395 IPR010960 Flavocytochrome c DOE58_RS16395 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE58_RS16395 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS16395 IPR011031 Multihaem cytochrome DOE58_RS16395 IPR036280 Multiheme cytochrome superfamily DOE58_RS16395 IPR012286 Tetrahaem cytochrome domain DOE58_RS16395 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE58_RS16400 IPR036197 NarG-like superfamily DOE58_RS16400 IPR012830 Citrate utilization protein B DOE58_RS16405 IPR005829 Sugar transporter, conserved site DOE58_RS16405 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS16405 IPR036259 MFS transporter superfamily DOE58_RS16405 IPR020846 Major facilitator superfamily domain DOE58_RS16405 IPR011701 Major facilitator superfamily DOE58_RS16410 IPR025727 YbfN-like lipoprotein DOE58_RS16415 IPR023614 Porin domain superfamily DOE58_RS16415 IPR005318 Outer membrane porin, bacterial DOE58_RS16425 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DOE58_RS16425 IPR004514 Glutamine-tRNA synthetase DOE58_RS16425 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain DOE58_RS16425 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE58_RS16425 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DOE58_RS16425 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily DOE58_RS16425 IPR022861 Glutamine-tRNA ligase, bacterial DOE58_RS16425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS16425 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE58_RS16430 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component DOE58_RS16430 IPR001996 Phosphotransferase system, IIB component, type 1 DOE58_RS16430 IPR011055 Duplicated hybrid motif DOE58_RS16430 IPR036878 Glucose permease domain IIB DOE58_RS16430 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE58_RS16430 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 DOE58_RS16430 IPR003352 Phosphotransferase system, EIIC DOE58_RS16430 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE58_RS16435 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DOE58_RS16435 IPR004547 Glucosamine-6-phosphate isomerase DOE58_RS16435 IPR018321 Glucosamine-6-phosphate isomerase, conserved site DOE58_RS16435 IPR037171 NagB/RpiA transferase-like DOE58_RS16440 IPR006680 Amidohydrolase-related DOE58_RS16440 IPR003764 N-acetylglucosamine-6-phosphate deacetylase DOE58_RS16440 IPR032466 Metal-dependent hydrolase DOE58_RS16440 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS16445 IPR000600 ROK family DOE58_RS16445 IPR000835 MarR-type HTH domain DOE58_RS16445 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16445 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS16450 IPR036412 HAD-like superfamily DOE58_RS16450 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOE58_RS16450 IPR023214 HAD superfamily DOE58_RS16455 IPR017932 Glutamine amidotransferase type 2 domain DOE58_RS16455 IPR001962 Asparagine synthase DOE58_RS16455 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS16455 IPR006426 Asparagine synthase, glutamine-hydrolyzing DOE58_RS16455 IPR033738 Asparagine synthase, N-terminal domain DOE58_RS16455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16495 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DOE58_RS16495 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS16495 IPR002938 FAD-binding domain DOE58_RS16495 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DOE58_RS16500 IPR002792 TRAM domain DOE58_RS16500 IPR023404 Radical SAM, alpha/beta horseshoe DOE58_RS16500 IPR006638 Elp3/MiaB/NifB DOE58_RS16500 IPR007197 Radical SAM DOE58_RS16500 IPR005839 Methylthiotransferase DOE58_RS16500 IPR013848 Methylthiotransferase, N-terminal DOE58_RS16500 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB DOE58_RS16500 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE58_RS16500 IPR020612 Methylthiotransferase, conserved site DOE58_RS16505 IPR003714 PhoH-like protein DOE58_RS16505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16510 IPR002036 Endoribonuclease YbeY DOE58_RS16510 IPR020549 Endoribonuclease YbeY, conserved site DOE58_RS16510 IPR023091 Metalloprotease catalytic domain superfamily, predicted DOE58_RS16515 IPR005170 Transporter-associated domain DOE58_RS16515 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS16515 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS16515 IPR000644 CBS domain DOE58_RS16520 IPR036526 Carbon-nitrogen hydrolase superfamily DOE58_RS16520 IPR004563 Apolipoprotein N-acyltransferase DOE58_RS16520 IPR003010 Carbon-nitrogen hydrolase DOE58_RS16525 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS16530 IPR035906 MetI-like superfamily DOE58_RS16530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS16530 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ DOE58_RS16530 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS16535 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DOE58_RS16535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS16535 IPR035906 MetI-like superfamily DOE58_RS16535 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM DOE58_RS16540 IPR003593 AAA+ ATPase domain DOE58_RS16540 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16540 IPR017871 ABC transporter, conserved site DOE58_RS16540 IPR003439 ABC transporter-like DOE58_RS16540 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DOE58_RS16545 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site DOE58_RS16545 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOE58_RS16545 IPR036452 Ribonucleoside hydrolase-like DOE58_RS16545 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA DOE58_RS16545 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOE58_RS16550 IPR009912 Zinc-ribbon containing domain DOE58_RS16555 IPR003593 AAA+ ATPase domain DOE58_RS16555 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16555 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS16555 IPR036291 NAD(P)-binding domain superfamily DOE58_RS16555 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS16555 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS16555 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS16555 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS16555 IPR013767 PAS fold DOE58_RS16555 IPR035965 PAS domain superfamily DOE58_RS16555 IPR009057 Homeobox-like domain superfamily DOE58_RS16555 IPR000014 PAS domain DOE58_RS16560 IPR004684 2-keto-3-deoxygluconate permease DOE58_RS16565 IPR007392 D-galactarate/Altronate dehydratase, C-terminal DOE58_RS16575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16575 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE58_RS16575 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS16575 IPR025709 Leucyl-tRNA synthetase, editing domain DOE58_RS16575 IPR002302 Leucine-tRNA ligase DOE58_RS16575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS16575 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE58_RS16575 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE58_RS16580 IPR007485 LPS-assembly lipoprotein LptE DOE58_RS16585 IPR005790 DNA polymerase III, delta subunit DOE58_RS16585 IPR010372 DNA polymerase III delta, N-terminal DOE58_RS16585 IPR032780 DNA polymerase III subunit delta, C-terminal DOE58_RS16585 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16585 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE58_RS16590 IPR004821 Cytidyltransferase-like domain DOE58_RS16590 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase DOE58_RS16590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16595 IPR005860 L-threonine-O-3-phosphate decarboxylase DOE58_RS16595 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE58_RS16595 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS16595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS16595 IPR004839 Aminotransferase, class I/classII DOE58_RS16595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS16600 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE58_RS16600 IPR017578 Alpha-ribazole phosphatase, CobC DOE58_RS16600 IPR029033 Histidine phosphatase superfamily DOE58_RS16600 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS16605 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DOE58_RS16610 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS16610 IPR003742 RNA methyltransferase RlmH DOE58_RS16610 IPR029028 Alpha/beta knot methyltransferases DOE58_RS16615 IPR017790 Penicillin-binding protein 2 DOE58_RS16615 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS16615 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE58_RS16615 IPR005311 Penicillin-binding protein, dimerisation domain DOE58_RS16615 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS16620 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOE58_RS16620 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB DOE58_RS16620 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DOE58_RS16625 IPR007730 Sporulation-like domain DOE58_RS16625 IPR012997 Rare lipoprotein A DOE58_RS16625 IPR036908 RlpA-like domain superfamily DOE58_RS16625 IPR009009 RlpA-like protein, double-psi beta-barrel domain DOE58_RS16625 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DOE58_RS16625 IPR036680 Sporulation-like domain superfamily DOE58_RS16630 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DOE58_RS16630 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DOE58_RS16630 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DOE58_RS16630 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS16630 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DOE58_RS16630 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DOE58_RS16635 IPR007454 Uncharacterised protein family UPF0250 DOE58_RS16635 IPR027471 YbeD-like domain superfamily DOE58_RS16640 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE58_RS16640 IPR000544 Octanoyltransferase DOE58_RS16640 IPR020605 Octanoyltransferase, conserved site DOE58_RS16645 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16645 IPR000847 Transcription regulator HTH, LysR DOE58_RS16645 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS16645 IPR005119 LysR, substrate-binding DOE58_RS16650 IPR031691 Lipoyl synthase, N-terminal DOE58_RS16650 IPR006638 Elp3/MiaB/NifB DOE58_RS16650 IPR007197 Radical SAM DOE58_RS16650 IPR013785 Aldolase-type TIM barrel DOE58_RS16650 IPR003698 Lipoyl synthase DOE58_RS16655 IPR024905 Sec-independent protein translocase protein TatE DOE58_RS16655 IPR006312 Sec-independent protein translocase protein TatA/E DOE58_RS16655 IPR003369 Sec-independent protein translocase protein TatA/B/E DOE58_RS16660 IPR003010 Carbon-nitrogen hydrolase DOE58_RS16660 IPR036526 Carbon-nitrogen hydrolase superfamily DOE58_RS16660 IPR001110 Uncharacterised protein family UPF0012, conserved site DOE58_RS16665 IPR003691 Putative fluoride ion transporter CrcB DOE58_RS16670 IPR002059 Cold-shock protein, DNA-binding DOE58_RS16670 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS16670 IPR019844 Cold-shock (CSD) domain DOE58_RS16670 IPR012156 Cold shock, CspA DOE58_RS16670 IPR011129 Cold shock domain DOE58_RS16675 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS16675 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP DOE58_RS16685 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE58_RS16685 IPR004669 C4-dicarboxylate anaerobic carrier DOE58_RS16690 IPR024187 Signal transduction response regulator, citrate/malate metabolism DOE58_RS16690 IPR011006 CheY-like superfamily DOE58_RS16690 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS16690 IPR028141 Transcriptional regulator DOE58_RS16695 IPR033463 Single cache domain 3 DOE58_RS16695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS16695 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS16695 IPR029151 Periplasmic sensor-like domain superfamily DOE58_RS16695 IPR000014 PAS domain DOE58_RS16695 IPR035965 PAS domain superfamily DOE58_RS16695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS16695 IPR013767 PAS fold DOE58_RS16695 IPR039506 SpoOB, alpha-helical domain DOE58_RS16695 IPR005467 Histidine kinase domain DOE58_RS16695 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB DOE58_RS16700 IPR004821 Cytidyltransferase-like domain DOE58_RS16700 IPR000182 GNAT domain DOE58_RS16700 IPR013166 Citrate lyase ligase, C-terminal DOE58_RS16700 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS16700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16700 IPR005216 Citrate lyase ligase DOE58_RS16705 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DOE58_RS16705 IPR006495 Citrate lyase acyl carrier protein CitD DOE58_RS16710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS16710 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE58_RS16710 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS16710 IPR011206 Citrate lyase beta subunit-like DOE58_RS16710 IPR006475 Citrate lyase, beta subunit, bacteria DOE58_RS16715 IPR006472 Citrate lyase, alpha subunit DOE58_RS16715 IPR037171 NagB/RpiA transferase-like DOE58_RS16720 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DOE58_RS16725 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG DOE58_RS16725 IPR002736 Triphosphoribosyl-dephospho-CoA protein DOE58_RS16730 IPR001898 Solute carrier family 13 DOE58_RS16730 IPR030676 Citrate carrier CitT-related DOE58_RS16735 IPR039378 Ribonuclease T2, prokaryotic DOE58_RS16735 IPR033130 Ribonuclease T2, His active site 2 DOE58_RS16735 IPR018188 Ribonuclease T2, His active site 1 DOE58_RS16735 IPR036430 Ribonuclease T2-like superfamily DOE58_RS16735 IPR001568 Ribonuclease T2-like DOE58_RS16745 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DOE58_RS16745 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain DOE58_RS16745 IPR028625 Regulator of nucleoside diphosphate kinase DOE58_RS16745 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DOE58_RS16745 IPR023459 Transcription elongation factor GreA/GreB family DOE58_RS16750 IPR011032 GroES-like superfamily DOE58_RS16750 IPR036291 NAD(P)-binding domain superfamily DOE58_RS16750 IPR027399 Alcohol dehydrogenase GroES-associated DOE58_RS16750 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS16750 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS16750 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS16755 IPR006015 Universal stress protein A family DOE58_RS16755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16755 IPR006016 UspA DOE58_RS16765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS16765 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS16765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS16770 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS16770 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS16770 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS16770 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS16770 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS16770 IPR006656 Molybdopterin oxidoreductase DOE58_RS16780 IPR036249 Thioredoxin-like superfamily DOE58_RS16780 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DOE58_RS16780 IPR012081 Alkyl hydroperoxide reductase subunit F DOE58_RS16780 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS16780 IPR023753 FAD/NAD(P)-binding domain DOE58_RS16780 IPR012336 Thioredoxin-like fold DOE58_RS16780 IPR002109 Glutaredoxin DOE58_RS16785 IPR017559 Alkyl hydroperoxide reductase subunit C DOE58_RS16785 IPR019479 Peroxiredoxin, C-terminal DOE58_RS16785 IPR036249 Thioredoxin-like superfamily DOE58_RS16785 IPR013766 Thioredoxin domain DOE58_RS16785 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE58_RS16785 IPR024706 Peroxiredoxin, AhpC-type DOE58_RS16790 IPR033954 Disulphide bond isomerase, DsbC/G DOE58_RS16790 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DOE58_RS16790 IPR012336 Thioredoxin-like fold DOE58_RS16790 IPR036249 Thioredoxin-like superfamily DOE58_RS16800 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS16800 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS16800 IPR005119 LysR, substrate-binding DOE58_RS16800 IPR000847 Transcription regulator HTH, LysR DOE58_RS16805 IPR021845 Protein of unknown function DUF3440 DOE58_RS16805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS16805 IPR002500 Phosphoadenosine phosphosulphate reductase DOE58_RS16810 IPR036086 ParB/Sulfiredoxin superfamily DOE58_RS16810 IPR003115 ParB/Sulfiredoxin DOE58_RS16815 IPR004839 Aminotransferase, class I/classII DOE58_RS16815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS16815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS16815 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS16820 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS16820 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS16820 IPR016205 Glycerol dehydrogenase DOE58_RS16825 IPR007423 Selenoprotein, putative DOE58_RS16830 IPR025299 CstA, C-terminal domain DOE58_RS16830 IPR003706 CstA, N-terminal domain DOE58_RS16835 IPR026576 Proofreading thioesterase EntH DOE58_RS16835 IPR003736 Phenylacetic acid degradation-related domain DOE58_RS16835 IPR029069 HotDog domain superfamily DOE58_RS16835 IPR006683 Thioesterase domain DOE58_RS16840 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS16840 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase DOE58_RS16840 IPR036291 NAD(P)-binding domain superfamily DOE58_RS16840 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS16845 IPR009081 Phosphopantetheine binding ACP domain DOE58_RS16845 IPR000868 Isochorismatase-like DOE58_RS16845 IPR016291 Isochorismatase DOE58_RS16845 IPR036736 ACP-like superfamily DOE58_RS16845 IPR036380 Isochorismatase-like superfamily DOE58_RS16850 IPR011963 2,3-dihydroxybenzoate-AMP ligase DOE58_RS16850 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS16850 IPR000873 AMP-dependent synthetase/ligase DOE58_RS16850 IPR020845 AMP-binding, conserved site DOE58_RS16850 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS16855 IPR015890 Chorismate-utilising enzyme, C-terminal DOE58_RS16855 IPR004561 Isochorismate synthase DOE58_RS16855 IPR005801 ADC synthase DOE58_RS16860 IPR002491 ABC transporter periplasmic binding domain DOE58_RS16865 IPR020846 Major facilitator superfamily domain DOE58_RS16865 IPR023722 Enterobactin exporter, EntS DOE58_RS16865 IPR036259 MFS transporter superfamily DOE58_RS16865 IPR010290 Transmembrane secretion effector DOE58_RS16870 IPR037294 ABC transporter, BtuC-like DOE58_RS16870 IPR000522 ABC transporter, permease protein, BtuC-like DOE58_RS16875 IPR000522 ABC transporter, permease protein, BtuC-like DOE58_RS16875 IPR037294 ABC transporter, BtuC-like DOE58_RS16880 IPR003439 ABC transporter-like DOE58_RS16880 IPR003593 AAA+ ATPase domain DOE58_RS16880 IPR017871 ABC transporter, conserved site DOE58_RS16880 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS16885 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE58_RS16890 IPR020845 AMP-binding, conserved site DOE58_RS16890 IPR010071 Amino acid adenylation domain DOE58_RS16890 IPR029058 Alpha/Beta hydrolase fold DOE58_RS16890 IPR036736 ACP-like superfamily DOE58_RS16890 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS16890 IPR000873 AMP-dependent synthetase/ligase DOE58_RS16890 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS16890 IPR020802 Polyketide synthase, thioesterase domain DOE58_RS16890 IPR001242 Condensation domain DOE58_RS16890 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DOE58_RS16890 IPR009081 Phosphopantetheine binding ACP domain DOE58_RS16890 IPR006162 Phosphopantetheine attachment site DOE58_RS16890 IPR001031 Thioesterase DOE58_RS16890 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE58_RS16895 IPR005153 MbtH-like domain DOE58_RS16895 IPR038020 MbtH-like domain superfamily DOE58_RS16895 IPR037407 MbtH-like protein DOE58_RS16900 IPR000801 Putative esterase DOE58_RS16900 IPR021764 Enterochelin esterase, N-terminal DOE58_RS16900 IPR029058 Alpha/Beta hydrolase fold DOE58_RS16900 IPR013783 Immunoglobulin-like fold DOE58_RS16900 IPR014756 Immunoglobulin E-set DOE58_RS16905 IPR012910 TonB-dependent receptor, plug domain DOE58_RS16905 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS16905 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS16905 IPR010916 TonB box, conserved site DOE58_RS16905 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS16905 IPR010105 TonB-dependent siderophore receptor DOE58_RS16905 IPR039426 Vitamin B12 transporter BtuB-like DOE58_RS16905 IPR010917 TonB-dependent receptor, conserved site DOE58_RS16910 IPR008278 4'-phosphopantetheinyl transferase domain DOE58_RS16910 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE58_RS16910 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain DOE58_RS16910 IPR003542 Enterobactin synthetase-like, component D DOE58_RS16915 IPR011793 Putative glutamate--cysteine ligase YbdK DOE58_RS16915 IPR006336 Glutamate--cysteine ligase, GCS2 DOE58_RS16915 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE58_RS16920 IPR010590 Protein of unknown function DUF1158 DOE58_RS16925 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS16925 IPR018062 HTH domain AraC-type, conserved site DOE58_RS16925 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS16925 IPR009057 Homeobox-like domain superfamily DOE58_RS16930 IPR032551 HTH-type transcriptional repressor, C-terminal DOE58_RS16930 IPR009057 Homeobox-like domain superfamily DOE58_RS16930 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS16930 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS16930 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS16935 IPR007351 Uncharacterised protein YjbR DOE58_RS16935 IPR038056 YjbR-like superfamily DOE58_RS16940 IPR033878 Nitroreductase NfsB-like DOE58_RS16940 IPR029479 Nitroreductase DOE58_RS16940 IPR000415 Nitroreductase-like DOE58_RS16945 IPR036709 Autotransporter beta-domain superfamily DOE58_RS16945 IPR006315 Outer membrane autotransporter barrel DOE58_RS16945 IPR008265 Lipase, GDSL, active site DOE58_RS16945 IPR001087 GDSL lipase/esterase DOE58_RS16945 IPR017186 Lipase, autotransporter EstA DOE58_RS16945 IPR036514 SGNH hydrolase superfamily DOE58_RS16945 IPR005546 Autotransporter beta-domain DOE58_RS16955 IPR030192 Miniconductance mechanosensitive channel YbdG DOE58_RS16955 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS16955 IPR006685 Mechanosensitive ion channel MscS DOE58_RS16955 IPR010920 LSM domain superfamily DOE58_RS16960 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS16960 IPR004840 Amino acid permease, conserved site DOE58_RS16970 IPR016865 Inner membrane protein RclC DOE58_RS16970 IPR007339 Inner membrane protein RclC-like DOE58_RS16975 IPR036275 YdgH-like superfamily DOE58_RS16975 IPR025543 Dodecin-like DOE58_RS16975 IPR010854 Domain of unknown function DUF1471 DOE58_RS16980 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE58_RS16980 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE58_RS16980 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE58_RS16980 IPR023753 FAD/NAD(P)-binding domain DOE58_RS16980 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS16980 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE58_RS16985 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS16985 IPR011051 RmlC-like cupin domain superfamily DOE58_RS16985 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS16985 IPR009057 Homeobox-like domain superfamily DOE58_RS16985 IPR032783 AraC-type transcription regulator, ligand-binding domain DOE58_RS16990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS16990 IPR001036 Acriflavin resistance protein DOE58_RS16990 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DOE58_RS17005 IPR007267 GtrA-like protein DOE58_RS17005 IPR016480 Glucose translocase, bactoprenol-linked DOE58_RS17010 IPR001173 Glycosyltransferase 2-like DOE58_RS17010 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS17035 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS17035 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS17035 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS17050 IPR011006 CheY-like superfamily DOE58_RS17050 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS17050 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS17050 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS17055 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS17055 IPR008966 Adhesion domain superfamily DOE58_RS17055 IPR000259 Fimbrial-type adhesion domain DOE58_RS17060 IPR008966 Adhesion domain superfamily DOE58_RS17060 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS17060 IPR000259 Fimbrial-type adhesion domain DOE58_RS17065 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS17065 IPR025949 PapC-like, C-terminal domain DOE58_RS17065 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS17065 IPR000015 Outer membrane usher protein DOE58_RS17065 IPR037224 PapC, N-terminal domain superfamily DOE58_RS17065 IPR025885 PapC, N-terminal domain DOE58_RS17070 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS17070 IPR018046 Pili assembly chaperone, conserved site DOE58_RS17070 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS17070 IPR001829 Pili assembly chaperone, bacterial DOE58_RS17070 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS17070 IPR008962 PapD-like superfamily DOE58_RS17070 IPR013783 Immunoglobulin-like fold DOE58_RS17075 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS17075 IPR008966 Adhesion domain superfamily DOE58_RS17080 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS17080 IPR000259 Fimbrial-type adhesion domain DOE58_RS17080 IPR008966 Adhesion domain superfamily DOE58_RS17090 IPR036291 NAD(P)-binding domain superfamily DOE58_RS17090 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DOE58_RS17090 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOE58_RS17090 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DOE58_RS17090 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOE58_RS17095 IPR036986 RNA-binding S4 domain superfamily DOE58_RS17095 IPR002942 RNA-binding S4 domain DOE58_RS17100 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE58_RS17115 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DOE58_RS17115 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS17115 IPR032678 tRNA synthetases class I, catalytic domain DOE58_RS17115 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DOE58_RS17115 IPR015803 Cysteine-tRNA ligase DOE58_RS17115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS17120 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DOE58_RS17120 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS17120 IPR029000 Cyclophilin-like domain superfamily DOE58_RS17120 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DOE58_RS17125 IPR010138 UDP-2,3-diacylglucosamine hydrolase DOE58_RS17125 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type DOE58_RS17135 IPR035893 PurE domain superfamily DOE58_RS17135 IPR024694 PurE, prokaryotic type DOE58_RS17135 IPR000031 PurE domain DOE58_RS17135 IPR033747 Class I PurE DOE58_RS17140 IPR011054 Rudiment single hybrid motif DOE58_RS17140 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit DOE58_RS17140 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain DOE58_RS17140 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS17140 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOE58_RS17140 IPR011761 ATP-grasp fold DOE58_RS17140 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS17145 IPR001763 Rhodanese-like domain DOE58_RS17145 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase DOE58_RS17145 IPR036873 Rhodanese-like domain superfamily DOE58_RS17150 IPR035906 MetI-like superfamily DOE58_RS17150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS17155 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DOE58_RS17155 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DOE58_RS17155 IPR018449 NIL domain DOE58_RS17155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17155 IPR003439 ABC transporter-like DOE58_RS17155 IPR026253 Methionine import ATP-binding protein MetN DOE58_RS17155 IPR003593 AAA+ ATPase domain DOE58_RS17155 IPR017871 ABC transporter, conserved site DOE58_RS17160 IPR004872 Lipoprotein NlpA family DOE58_RS17170 IPR038766 Membrane component of ABC transporter, predicted DOE58_RS17175 IPR003439 ABC transporter-like DOE58_RS17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17175 IPR017871 ABC transporter, conserved site DOE58_RS17175 IPR003593 AAA+ ATPase domain DOE58_RS17180 IPR036514 SGNH hydrolase superfamily DOE58_RS17180 IPR013830 SGNH hydrolase-type esterase domain DOE58_RS17180 IPR008265 Lipase, GDSL, active site DOE58_RS17185 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS17185 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS17185 IPR036291 NAD(P)-binding domain superfamily DOE58_RS17190 IPR013766 Thioredoxin domain DOE58_RS17190 IPR036249 Thioredoxin-like superfamily DOE58_RS17190 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS17195 IPR005226 UPF0014 family DOE58_RS17200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17200 IPR003593 AAA+ ATPase domain DOE58_RS17200 IPR003439 ABC transporter-like DOE58_RS17200 IPR017871 ABC transporter, conserved site DOE58_RS17205 IPR001972 Stomatin family DOE58_RS17205 IPR018080 Band 7/stomatin-like, conserved site DOE58_RS17205 IPR036013 Band 7/SPFH domain superfamily DOE58_RS17205 IPR001107 Band 7 domain DOE58_RS17205 IPR032435 Band 7, C-terminal extension DOE58_RS17210 IPR002810 NfeD-like, C-terminal domain DOE58_RS17215 IPR011789 Cu(I)-responsive transcriptional regulator DOE58_RS17215 IPR009061 Putative DNA-binding domain superfamily DOE58_RS17215 IPR000551 MerR-type HTH domain DOE58_RS17220 IPR036163 Heavy metal-associated domain superfamily DOE58_RS17220 IPR001757 P-type ATPase DOE58_RS17220 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS17220 IPR018303 P-type ATPase, phosphorylation site DOE58_RS17220 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS17220 IPR008250 P-type ATPase, A domain superfamily DOE58_RS17220 IPR036412 HAD-like superfamily DOE58_RS17220 IPR023214 HAD superfamily DOE58_RS17220 IPR027256 P-type ATPase, subfamily IB DOE58_RS17220 IPR006121 Heavy metal-associated domain, HMA DOE58_RS17220 IPR017969 Heavy-metal-associated, conserved site DOE58_RS17230 IPR002816 TraB family DOE58_RS17235 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE58_RS17235 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE58_RS17235 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DOE58_RS17240 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS17240 IPR008334 5'-Nucleotidase, C-terminal DOE58_RS17240 IPR006146 5'-Nucleotidase, conserved site DOE58_RS17240 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE58_RS17240 IPR029052 Metallo-dependent phosphatase-like DOE58_RS17240 IPR006179 5'-Nucleotidase/apyrase DOE58_RS17245 IPR020846 Major facilitator superfamily domain DOE58_RS17245 IPR011701 Major facilitator superfamily DOE58_RS17245 IPR036259 MFS transporter superfamily DOE58_RS17250 IPR036291 NAD(P)-binding domain superfamily DOE58_RS17250 IPR006153 Cation/H+ exchanger DOE58_RS17250 IPR004771 K+/H+ exchanger DOE58_RS17250 IPR003148 Regulator of K+ conductance, N-terminal DOE58_RS17250 IPR038770 Sodium/solute symporter superfamily DOE58_RS17255 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS17255 IPR011611 Carbohydrate kinase PfkB DOE58_RS17255 IPR029056 Ribokinase-like DOE58_RS17260 IPR029058 Alpha/Beta hydrolase fold DOE58_RS17260 IPR013094 Alpha/beta hydrolase fold-3 DOE58_RS17260 IPR023508 Acetyl esterase DOE58_RS17260 IPR033140 Lipase, GDXG, putative serine active site DOE58_RS17265 IPR033659 Ferrochelatase, N-terminal DOE58_RS17265 IPR033644 Ferrochelatase, C-terminal DOE58_RS17265 IPR019772 Ferrochelatase, active site DOE58_RS17265 IPR001015 Ferrochelatase DOE58_RS17270 IPR000850 Adenylate kinase/UMP-CMP kinase DOE58_RS17270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17270 IPR006259 Adenylate kinase subfamily DOE58_RS17270 IPR033690 Adenylate kinase, conserved site DOE58_RS17270 IPR007862 Adenylate kinase, active site lid domain DOE58_RS17280 IPR001404 Heat shock protein Hsp90 family DOE58_RS17280 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS17280 IPR037196 HSP90, C-terminal domain DOE58_RS17280 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS17280 IPR020575 Heat shock protein Hsp90, N-terminal DOE58_RS17280 IPR019805 Heat shock protein Hsp90, conserved site DOE58_RS17280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS17285 IPR006171 TOPRIM domain DOE58_RS17285 IPR015967 Recombination protein RecR, conserved site DOE58_RS17285 IPR034137 RecR, TOPRIM domain DOE58_RS17285 IPR000093 DNA recombination protein RecR DOE58_RS17285 IPR023627 Recombination protein RecR DOE58_RS17285 IPR023628 Recombination protein RecR, C4-type zinc finger DOE58_RS17290 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DOE58_RS17290 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE58_RS17295 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily DOE58_RS17295 IPR001270 ClpA/B family DOE58_RS17295 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DOE58_RS17295 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV DOE58_RS17295 IPR003593 AAA+ ATPase domain DOE58_RS17295 IPR021029 DNA polymerase III, tau subunit, domain V DOE58_RS17295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17295 IPR012763 DNA polymerase III, subunit gamma/ tau DOE58_RS17295 IPR022754 DNA polymerase III, gamma subunit, domain III DOE58_RS17300 IPR029057 Phosphoribosyltransferase-like DOE58_RS17300 IPR005764 Adenine phosphoribosyl transferase DOE58_RS17300 IPR000836 Phosphoribosyltransferase domain DOE58_RS17310 IPR007401 Protein of unknown function DUF454 DOE58_RS17315 IPR010890 Primosomal replication PriB/PriC DOE58_RS17315 IPR038338 PriB/PriC superfamily DOE58_RS17320 IPR019630 Protein of unknown function DUF2496, YbaM-related DOE58_RS17325 IPR006842 Transposase (putative), YhgA-like DOE58_RS17325 IPR010106 Recombination-promoting nuclease RpnA DOE58_RS17330 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS17330 IPR024393 Mechanosensitive ion channel MscS, porin domain DOE58_RS17330 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DOE58_RS17330 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS17330 IPR010920 LSM domain superfamily DOE58_RS17330 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE58_RS17330 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS17330 IPR006685 Mechanosensitive ion channel MscS DOE58_RS17330 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS17335 IPR009057 Homeobox-like domain superfamily DOE58_RS17335 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS17335 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS17335 IPR013572 Transcription regulator MAATS, C-terminal DOE58_RS17335 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS17340 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS17340 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS17345 IPR001036 Acriflavin resistance protein DOE58_RS17345 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE58_RS17345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS17350 IPR019693 Biofilm formation regulator YbaJ DOE58_RS17355 IPR036666 HHA superfamily DOE58_RS17355 IPR007985 Haemolysin expression modulating, HHA DOE58_RS17360 IPR001451 Hexapeptide repeat DOE58_RS17360 IPR018357 Hexapeptide transferase, conserved site DOE58_RS17360 IPR024688 Maltose/galactoside acetyltransferase DOE58_RS17360 IPR011004 Trimeric LpxA-like superfamily DOE58_RS17365 IPR019713 Inner membrane protein YlaC DOE58_RS17370 IPR035977 Ribosomal protein L36 superfamily DOE58_RS17370 IPR000473 Ribosomal protein L36 DOE58_RS17375 IPR034704 L28p-like DOE58_RS17375 IPR002150 Ribosomal protein L31 DOE58_RS17375 IPR042105 Ribosomal protein L31 superfamily DOE58_RS17375 IPR027493 Ribosomal protein L31 type B DOE58_RS17380 IPR001633 EAL domain DOE58_RS17380 IPR035919 EAL domain superfamily DOE58_RS17380 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE58_RS17390 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DOE58_RS17390 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS17390 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DOE58_RS17395 IPR039366 YscW/ExsB DOE58_RS17400 IPR029069 HotDog domain superfamily DOE58_RS17400 IPR003703 Acyl-CoA thioesterase DOE58_RS17405 IPR018047 Ammonium transporter, conserved site DOE58_RS17405 IPR001905 Ammonium transporter DOE58_RS17405 IPR024041 Ammonium transporter AmtB-like domain DOE58_RS17405 IPR029020 Ammonium/urea transporter DOE58_RS17410 IPR002332 Nitrogen regulatory protein P-II, urydylation site DOE58_RS17410 IPR017918 Nitrogen regulatory protein PII, conserved site DOE58_RS17410 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE58_RS17410 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE58_RS17410 IPR002187 Nitrogen regulatory protein PII DOE58_RS17415 IPR039421 Type I protein exporter DOE58_RS17415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17415 IPR003439 ABC transporter-like DOE58_RS17415 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS17415 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS17415 IPR003593 AAA+ ATPase domain DOE58_RS17415 IPR017871 ABC transporter, conserved site DOE58_RS17420 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS17420 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS17420 IPR003593 AAA+ ATPase domain DOE58_RS17420 IPR003439 ABC transporter-like DOE58_RS17420 IPR017871 ABC transporter, conserved site DOE58_RS17420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17420 IPR039421 Type I protein exporter DOE58_RS17425 IPR011008 Dimeric alpha-beta barrel DOE58_RS17425 IPR019888 Transcription regulator AsnC-type DOE58_RS17425 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE58_RS17425 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS17425 IPR000485 AsnC-type HTH domain DOE58_RS17425 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE58_RS17425 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS17425 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS17435 IPR000150 Cof family DOE58_RS17435 IPR036412 HAD-like superfamily DOE58_RS17435 IPR023214 HAD superfamily DOE58_RS17435 IPR023938 HMP-PP phosphatase DOE58_RS17435 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS17440 IPR000914 Solute-binding protein family 5 domain DOE58_RS17440 IPR039424 Solute-binding protein family 5 DOE58_RS17440 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE58_RS17445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS17445 IPR018317 Queuosine biosynthesis protein QueC DOE58_RS17450 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DOE58_RS17450 IPR029069 HotDog domain superfamily DOE58_RS17455 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DOE58_RS17455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DOE58_RS17455 IPR010994 RuvA domain 2-like DOE58_RS17460 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE58_RS17460 IPR027304 Trigger factor/SurA domain superfamily DOE58_RS17460 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE58_RS17465 IPR020816 Histone-like DNA-binding protein, conserved site DOE58_RS17465 IPR000119 Histone-like DNA-binding protein DOE58_RS17465 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE58_RS17470 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS17470 IPR003111 Lon, substrate-binding domain DOE58_RS17470 IPR003959 ATPase, AAA-type, core DOE58_RS17470 IPR027065 Lon protease DOE58_RS17470 IPR008269 Peptidase S16, Lon proteolytic domain DOE58_RS17470 IPR008268 Peptidase S16, active site DOE58_RS17470 IPR027543 Lon protease, bacterial DOE58_RS17470 IPR004815 Lon protease, bacterial/eukaryotic-type DOE58_RS17470 IPR015947 PUA-like superfamily DOE58_RS17470 IPR003593 AAA+ ATPase domain DOE58_RS17470 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS17470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17475 IPR010603 Zinc finger, ClpX C4-type DOE58_RS17475 IPR019489 Clp ATPase, C-terminal DOE58_RS17475 IPR003959 ATPase, AAA-type, core DOE58_RS17475 IPR003593 AAA+ ATPase domain DOE58_RS17475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17475 IPR004487 Clp protease, ATP-binding subunit ClpX DOE58_RS17475 IPR038366 Zinc finger, ClpX C4-type superfamily DOE58_RS17480 IPR018215 ClpP, Ser active site DOE58_RS17480 IPR033135 ClpP, histidine active site DOE58_RS17480 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOE58_RS17480 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS17480 IPR001907 ATP-dependent Clp protease proteolytic subunit DOE58_RS17485 IPR027304 Trigger factor/SurA domain superfamily DOE58_RS17485 IPR008881 Trigger factor, ribosome-binding, bacterial DOE58_RS17485 IPR037041 Trigger factor, C-terminal domain superfamily DOE58_RS17485 IPR008880 Trigger factor, C-terminal DOE58_RS17485 IPR036611 Trigger factor ribosome-binding domain superfamily DOE58_RS17485 IPR005215 Trigger factor DOE58_RS17485 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS17500 IPR002634 BolA protein DOE58_RS17500 IPR036065 BolA-like superfamily DOE58_RS17510 IPR012640 Membrane lipoprotein, lipid attachment site DOE58_RS17510 IPR005619 Uncharacterised protein family, YajG DOE58_RS17515 IPR011701 Major facilitator superfamily DOE58_RS17515 IPR036259 MFS transporter superfamily DOE58_RS17515 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 DOE58_RS17515 IPR020846 Major facilitator superfamily domain DOE58_RS17520 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DOE58_RS17520 IPR008972 Cupredoxin DOE58_RS17520 IPR006333 Cytochrome o ubiquinol oxidase subunit II DOE58_RS17520 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DOE58_RS17520 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DOE58_RS17520 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain DOE58_RS17520 IPR010514 COX aromatic rich motif DOE58_RS17525 IPR014207 Cytochrome o ubiquinol oxidase, subunit I DOE58_RS17525 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DOE58_RS17525 IPR000883 Cytochrome c oxidase subunit I DOE58_RS17525 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DOE58_RS17525 IPR023616 Cytochrome c oxidase-like, subunit I domain DOE58_RS17530 IPR000298 Cytochrome c oxidase subunit III-like DOE58_RS17530 IPR024791 Cytochrome c oxidase subunit III DOE58_RS17530 IPR035973 Cytochrome c oxidase subunit III-like superfamily DOE58_RS17530 IPR033946 Ubiquinol oxidase subunit III domain DOE58_RS17530 IPR014206 Cytochrome o ubiquinol oxidase, subunit III DOE58_RS17530 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DOE58_RS17535 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DOE58_RS17535 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DOE58_RS17540 IPR006369 Protohaem IX farnesyltransferase DOE58_RS17540 IPR000537 UbiA prenyltransferase family DOE58_RS17540 IPR030470 UbiA prenyltransferase conserved site DOE58_RS17545 IPR011701 Major facilitator superfamily DOE58_RS17545 IPR036259 MFS transporter superfamily DOE58_RS17545 IPR020846 Major facilitator superfamily domain DOE58_RS17550 IPR007551 Protein of unknown function DUF520 DOE58_RS17550 IPR035570 UPF0234, N-terminal DOE58_RS17550 IPR036183 YajQ-like superfamily DOE58_RS17550 IPR035571 UPF0234-like, C-terminal DOE58_RS17555 IPR013752 Ketopantoate reductase, C-terminal domain DOE58_RS17555 IPR036291 NAD(P)-binding domain superfamily DOE58_RS17555 IPR013332 Ketopantoate reductase, N-terminal domain DOE58_RS17555 IPR003710 Ketopantoate reductase ApbA/PanE DOE58_RS17555 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS17555 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS17560 IPR002818 DJ-1/PfpI DOE58_RS17560 IPR029062 Class I glutamine amidotransferase-like DOE58_RS17560 IPR006287 Protein/nucleic acid deglycase DJ-1 DOE58_RS17565 IPR036412 HAD-like superfamily DOE58_RS17565 IPR006439 HAD hydrolase, subfamily IA DOE58_RS17565 IPR023214 HAD superfamily DOE58_RS17565 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS17565 IPR006323 Phosphonoacetaldehyde hydrolase DOE58_RS17570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS17570 IPR000192 Aminotransferase class V domain DOE58_RS17570 IPR012703 2-aminoethylphosphonate--pyruvate transaminase DOE58_RS17570 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS17570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS17570 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DOE58_RS17575 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS17575 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS17575 IPR017722 Phosphonate utilization transcriptional regulator PhnR DOE58_RS17575 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS17575 IPR000524 Transcription regulator HTH, GntR DOE58_RS17575 IPR011663 UbiC transcription regulator-associated DOE58_RS17580 IPR006059 Bacterial extracellular solute-binding protein DOE58_RS17580 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter DOE58_RS17585 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT DOE58_RS17585 IPR017871 ABC transporter, conserved site DOE58_RS17585 IPR003439 ABC transporter-like DOE58_RS17585 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17585 IPR003593 AAA+ ATPase domain DOE58_RS17585 IPR013611 Transport-associated OB, type 2 DOE58_RS17590 IPR035906 MetI-like superfamily DOE58_RS17590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS17590 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU DOE58_RS17595 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV DOE58_RS17595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS17595 IPR035906 MetI-like superfamily DOE58_RS17600 IPR026340 Thiazole biosynthesis domain DOE58_RS17600 IPR020536 Thil, AANH domain DOE58_RS17600 IPR004114 THUMP domain DOE58_RS17600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS17600 IPR001763 Rhodanese-like domain DOE58_RS17600 IPR036873 Rhodanese-like domain superfamily DOE58_RS17600 IPR003720 tRNA sulfurtransferase ThiI DOE58_RS17605 IPR003761 Exonuclease VII, small subunit DOE58_RS17605 IPR037004 Exonuclease VII, small subunit superfamily DOE58_RS17610 IPR033749 Polyprenyl synthetase, conserved site DOE58_RS17610 IPR000092 Polyprenyl synthetase DOE58_RS17610 IPR008949 Isoprenoid synthase domain superfamily DOE58_RS17615 IPR005474 Transketolase, N-terminal DOE58_RS17615 IPR029061 Thiamin diphosphate-binding fold DOE58_RS17615 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS17615 IPR005475 Transketolase-like, pyrimidine-binding domain DOE58_RS17615 IPR020826 Transketolase binding site DOE58_RS17615 IPR005477 Deoxyxylulose-5-phosphate synthase DOE58_RS17615 IPR033248 Transketolase, C-terminal domain DOE58_RS17620 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS17620 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS17620 IPR020471 Aldo/keto reductase DOE58_RS17625 IPR026037 Phosphatidylglycerophosphatase A DOE58_RS17625 IPR036681 PgpA-like superfamily DOE58_RS17625 IPR007686 YutG/PgpA domain DOE58_RS17630 IPR006283 Thiamine-monophosphate kinase DOE58_RS17630 IPR036921 PurM-like, N-terminal domain superfamily DOE58_RS17630 IPR016188 PurM-like, N-terminal domain DOE58_RS17630 IPR036676 PurM-like, C-terminal domain superfamily DOE58_RS17630 IPR010918 PurM-like, C-terminal domain DOE58_RS17635 IPR006027 NusB/RsmB/TIM44 DOE58_RS17635 IPR035926 NusB-like superfamily DOE58_RS17635 IPR011605 NusB antitermination factor DOE58_RS17640 IPR002180 Lumazine/riboflavin synthase DOE58_RS17640 IPR034964 Lumazine synthase DOE58_RS17640 IPR036467 Lumazine/riboflavin synthase superfamily DOE58_RS17645 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DOE58_RS17645 IPR016192 APOBEC/CMP deaminase, zinc-binding DOE58_RS17645 IPR016193 Cytidine deaminase-like DOE58_RS17645 IPR004794 Riboflavin biosynthesis protein RibD DOE58_RS17645 IPR024072 Dihydrofolate reductase-like domain superfamily DOE58_RS17645 IPR011549 Riboflavin-specific deaminase, C-terminal DOE58_RS17645 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE58_RS17650 IPR005144 ATP-cone domain DOE58_RS17650 IPR003796 Ribonucleotide reductase regulator NrdR-like DOE58_RS17655 IPR021658 Domain of unknown function DUF3251 DOE58_RS17655 IPR037125 Lipoprotein YajI-like superfamily DOE58_RS17660 IPR003055 Nucleoside-specific channel-forming protein Tsx DOE58_RS17660 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily DOE58_RS17660 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like DOE58_RS17670 IPR002686 Transposase IS200-like DOE58_RS17670 IPR036515 Transposase IS200-like superfamily DOE58_RS17695 IPR002711 HNH endonuclease DOE58_RS17695 IPR003615 HNH nuclease DOE58_RS17700 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE58_RS17700 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOE58_RS17700 IPR005665 Protein-export membrane protein SecF, bacterial DOE58_RS17700 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE58_RS17705 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOE58_RS17705 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE58_RS17705 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE58_RS17705 IPR027398 SecD export protein N-terminal TM domain DOE58_RS17705 IPR005791 Protein translocase subunit SecD DOE58_RS17710 IPR003849 Preprotein translocase YajC DOE58_RS17715 IPR036511 Queuine tRNA-ribosyltransferase-like DOE58_RS17715 IPR002616 tRNA-guanine(15) transglycosylase-like DOE58_RS17715 IPR004803 tRNA-guanine transglycosylase DOE58_RS17725 IPR042118 QueA, domain 1 DOE58_RS17725 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DOE58_RS17725 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DOE58_RS17725 IPR042119 QueA, domain 2 DOE58_RS17730 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria DOE58_RS17730 IPR007431 Acyl carrier protein phosphodiesterase DOE58_RS17735 IPR019479 Peroxiredoxin, C-terminal DOE58_RS17735 IPR036249 Thioredoxin-like superfamily DOE58_RS17735 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DOE58_RS17735 IPR024706 Peroxiredoxin, AhpC-type DOE58_RS17735 IPR013766 Thioredoxin domain DOE58_RS17745 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS17745 IPR014756 Immunoglobulin E-set DOE58_RS17745 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain DOE58_RS17745 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS17745 IPR017853 Glycoside hydrolase superfamily DOE58_RS17745 IPR017069 Maltodextrin glucosidase DOE58_RS17750 IPR004840 Amino acid permease, conserved site DOE58_RS17750 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS17755 IPR004685 Branched-chain amino acid transport system II carrier protein DOE58_RS17765 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS17765 IPR005467 Histidine kinase domain DOE58_RS17765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS17765 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR DOE58_RS17765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS17765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS17765 IPR000014 PAS domain DOE58_RS17765 IPR035965 PAS domain superfamily DOE58_RS17765 IPR013767 PAS fold DOE58_RS17765 IPR021766 Phosphate regulon sensor protein PhoR DOE58_RS17765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS17770 IPR011006 CheY-like superfamily DOE58_RS17770 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS17770 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DOE58_RS17770 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS17770 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS17770 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS17775 IPR029052 Metallo-dependent phosphatase-like DOE58_RS17775 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DOE58_RS17775 IPR004593 Nuclease SbcCD subunit D DOE58_RS17775 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS17775 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain DOE58_RS17780 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17780 IPR038729 Rad50/SbcC-type AAA domain DOE58_RS17780 IPR004592 Nuclease SbcC, gammaproteobacteria type DOE58_RS17785 IPR036259 MFS transporter superfamily DOE58_RS17785 IPR020846 Major facilitator superfamily domain DOE58_RS17785 IPR011701 Major facilitator superfamily DOE58_RS17790 IPR000600 ROK family DOE58_RS17795 IPR007476 Putative exonuclease, RdgC DOE58_RS17800 IPR009664 Pyrimidine/purine nucleoside phosphorylase DOE58_RS17800 IPR014710 RmlC-like jelly roll fold DOE58_RS17800 IPR011051 RmlC-like cupin domain superfamily DOE58_RS17805 IPR010843 Uncharacterised protein family AroM DOE58_RS17810 IPR038462 YaiA-like superfamily DOE58_RS17810 IPR032303 YaiA protein DOE58_RS17815 IPR027544 Shikimate kinase 2 DOE58_RS17815 IPR000623 Shikimate kinase/Threonine synthase-like 1 DOE58_RS17815 IPR031322 Shikimate kinase/gluconokinase DOE58_RS17815 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17815 IPR023000 Shikimate kinase, conserved site DOE58_RS17820 IPR003791 Protein of unknown function UPF0178 DOE58_RS17825 IPR036291 NAD(P)-binding domain superfamily DOE58_RS17825 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS17825 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE58_RS17825 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DOE58_RS17825 IPR000304 Pyrroline-5-carboxylate reductase DOE58_RS17830 IPR000160 GGDEF domain DOE58_RS17830 IPR029787 Nucleotide cyclase DOE58_RS17830 IPR007894 MASE2 DOE58_RS17835 IPR011690 Phosphate-starvation-induced PsiF repeat DOE58_RS17845 IPR019732 Sigma-S stabilisation anti-adaptor protein DOE58_RS17850 IPR036259 MFS transporter superfamily DOE58_RS17850 IPR020846 Major facilitator superfamily domain DOE58_RS17850 IPR011701 Major facilitator superfamily DOE58_RS17850 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE58_RS17850 IPR023692 Multidrug resistance protein MdtG DOE58_RS17860 IPR011095 D-alanine--D-alanine ligase, C-terminal DOE58_RS17860 IPR011761 ATP-grasp fold DOE58_RS17860 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS17860 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS17860 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOE58_RS17860 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOE58_RS17860 IPR005905 D-alanine--D-alanine ligase DOE58_RS17865 IPR020490 Uncharacterised protein family YaiZ DOE58_RS17870 IPR020513 Uncharacterised protein family, inner membrane YaiY DOE58_RS17875 IPR011673 Protein of unknown function DUF1615 DOE58_RS17880 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS17880 IPR009248 SbmA/BacA-like DOE58_RS17890 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS17890 IPR001466 Beta-lactamase-related DOE58_RS17895 IPR000595 Cyclic nucleotide-binding domain DOE58_RS17895 IPR034719 Inhibitor of hydrogen peroxide resistance DOE58_RS17895 IPR041687 IprA, winged helix-turn-helix domain DOE58_RS17895 IPR018490 Cyclic nucleotide-binding-like DOE58_RS17900 IPR005546 Autotransporter beta-domain DOE58_RS17900 IPR036709 Autotransporter beta-domain superfamily DOE58_RS17900 IPR006315 Outer membrane autotransporter barrel DOE58_RS17900 IPR011050 Pectin lyase fold/virulence factor DOE58_RS17900 IPR003991 Pertactin virulence factor family DOE58_RS17905 IPR030656 Delta-aminolevulinic acid dehydratase, active site DOE58_RS17905 IPR001731 Delta-aminolevulinic acid dehydratase DOE58_RS17905 IPR013785 Aldolase-type TIM barrel DOE58_RS17910 IPR012694 Propionate--CoA ligase DOE58_RS17910 IPR020845 AMP-binding, conserved site DOE58_RS17910 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS17910 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS17910 IPR000873 AMP-dependent synthetase/ligase DOE58_RS17910 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DOE58_RS17915 IPR012705 2-methylcitrate dehydratase PrpD DOE58_RS17915 IPR005656 MmgE/PrpD DOE58_RS17915 IPR042188 MmgE/PrpD superfamily, domain 2 DOE58_RS17915 IPR042183 MmgE/PrpD superfamily, domain 1 DOE58_RS17915 IPR036148 MmgE/PrpD superfamily DOE58_RS17920 IPR036969 Citrate synthase superfamily DOE58_RS17920 IPR019810 Citrate synthase active site DOE58_RS17920 IPR016143 Citrate synthase-like, small alpha subdomain DOE58_RS17920 IPR016142 Citrate synthase-like, large alpha subdomain DOE58_RS17920 IPR024176 Citrate synthase, bacterial-type DOE58_RS17920 IPR011278 2-methylcitrate synthase/citrate synthase type I DOE58_RS17920 IPR002020 Citrate synthase DOE58_RS17925 IPR012695 2-methylisocitrate lyase DOE58_RS17925 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS17925 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS17925 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOE58_RS17925 IPR039556 ICL/PEPM domain DOE58_RS17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17930 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR DOE58_RS17930 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal DOE58_RS17930 IPR003593 AAA+ ATPase domain DOE58_RS17930 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS17930 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS17930 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS17930 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS17930 IPR009057 Homeobox-like domain superfamily DOE58_RS17935 IPR010854 Domain of unknown function DUF1471 DOE58_RS17935 IPR036275 YdgH-like superfamily DOE58_RS17935 IPR025543 Dodecin-like DOE58_RS17940 IPR004778 Homoserine/Threonine efflux protein DOE58_RS17940 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS17945 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS17945 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS17945 IPR012910 TonB-dependent receptor, plug domain DOE58_RS17945 IPR039423 TonB-dependent receptor-like DOE58_RS17945 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS17945 IPR010105 TonB-dependent siderophore receptor DOE58_RS17960 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DOE58_RS17965 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DOE58_RS17975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS17975 IPR006935 Helicase/UvrB, N-terminal DOE58_RS17975 IPR014883 VRR-NUC domain DOE58_RS17980 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS17980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS17980 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class DOE58_RS17980 IPR041405 Type III R-M EcoP15I, C-terminal DOE58_RS17980 IPR002941 DNA methylase N-4/N-6 DOE58_RS17985 IPR020846 Major facilitator superfamily domain DOE58_RS17985 IPR011701 Major facilitator superfamily DOE58_RS17985 IPR036259 MFS transporter superfamily DOE58_RS17995 IPR009061 Putative DNA-binding domain superfamily DOE58_RS17995 IPR011789 Cu(I)-responsive transcriptional regulator DOE58_RS17995 IPR015358 Transcription regulator MerR, DNA binding DOE58_RS17995 IPR000551 MerR-type HTH domain DOE58_RS18000 IPR001757 P-type ATPase DOE58_RS18000 IPR018303 P-type ATPase, phosphorylation site DOE58_RS18000 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS18000 IPR006122 Heavy metal-associated domain, copper ion-binding DOE58_RS18000 IPR008250 P-type ATPase, A domain superfamily DOE58_RS18000 IPR027256 P-type ATPase, subfamily IB DOE58_RS18000 IPR036163 Heavy metal-associated domain superfamily DOE58_RS18000 IPR006121 Heavy metal-associated domain, HMA DOE58_RS18000 IPR036412 HAD-like superfamily DOE58_RS18000 IPR023214 HAD superfamily DOE58_RS18000 IPR017969 Heavy-metal-associated, conserved site DOE58_RS18000 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS18005 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS18005 IPR022824 Multidrug resistance protein MdtA DOE58_RS18005 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS18010 IPR001036 Acriflavin resistance protein DOE58_RS18010 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DOE58_RS18010 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS18015 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE58_RS18015 IPR003423 Outer membrane efflux protein DOE58_RS18035 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS18035 IPR027385 Outer membrane protein beta-barrel domain DOE58_RS18035 IPR000758 Virulence-related outer membrane protein DOE58_RS18050 IPR035919 EAL domain superfamily DOE58_RS18050 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE58_RS18050 IPR001633 EAL domain DOE58_RS18075 IPR039458 FimA-like DOE58_RS18075 IPR008966 Adhesion domain superfamily DOE58_RS18075 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18080 IPR001829 Pili assembly chaperone, bacterial DOE58_RS18080 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS18080 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS18080 IPR008962 PapD-like superfamily DOE58_RS18080 IPR013783 Immunoglobulin-like fold DOE58_RS18080 IPR018046 Pili assembly chaperone, conserved site DOE58_RS18080 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS18085 IPR037224 PapC, N-terminal domain superfamily DOE58_RS18085 IPR025885 PapC, N-terminal domain DOE58_RS18085 IPR025949 PapC-like, C-terminal domain DOE58_RS18085 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS18085 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS18085 IPR000015 Outer membrane usher protein DOE58_RS18095 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS18095 IPR008962 PapD-like superfamily DOE58_RS18095 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS18095 IPR001829 Pili assembly chaperone, bacterial DOE58_RS18095 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS18095 IPR018046 Pili assembly chaperone, conserved site DOE58_RS18095 IPR013783 Immunoglobulin-like fold DOE58_RS18140 IPR010998 Integrase/recombinase, N-terminal DOE58_RS18140 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS18140 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS18140 IPR025166 Integrase, DNA-binding domain DOE58_RS18140 IPR038488 Integrase, DNA-binding domain superfamily DOE58_RS18140 IPR002104 Integrase, catalytic domain DOE58_RS18140 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS18150 IPR012134 Glutamate-5-semialdehyde dehydrogenase DOE58_RS18150 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS18150 IPR000965 GPR domain DOE58_RS18150 IPR015590 Aldehyde dehydrogenase domain DOE58_RS18150 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DOE58_RS18150 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS18150 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS18155 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS18155 IPR041739 Glutamate-5-kinase domain DOE58_RS18155 IPR001057 Glutamate/acetylglutamate kinase DOE58_RS18155 IPR011529 Glutamate 5-kinase DOE58_RS18155 IPR019797 Glutamate 5-kinase, conserved site DOE58_RS18155 IPR002478 PUA domain DOE58_RS18155 IPR015947 PUA-like superfamily DOE58_RS18155 IPR036974 PUA domain superfamily DOE58_RS18155 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS18155 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DOE58_RS18160 IPR001702 Porin, Gram-negative type DOE58_RS18160 IPR033900 Porin domain, Gram-negative type DOE58_RS18160 IPR023614 Porin domain superfamily DOE58_RS18160 IPR001897 Porin, gammaproteobacterial DOE58_RS18160 IPR013793 Porin, Gram-negative type, conserved site DOE58_RS18165 IPR009986 Sigma factor-binding transcriptional regulator Crl DOE58_RS18165 IPR038208 Sigma factor-binding protein Crl superfamily DOE58_RS18170 IPR010520 UPF0255 family DOE58_RS18170 IPR029058 Alpha/Beta hydrolase fold DOE58_RS18175 IPR000836 Phosphoribosyltransferase domain DOE58_RS18175 IPR029057 Phosphoribosyltransferase-like DOE58_RS18175 IPR023747 Xanthine-guanine phosphoribosyltransferase DOE58_RS18180 IPR011650 Peptidase M20, dimerisation domain DOE58_RS18180 IPR002933 Peptidase M20 DOE58_RS18180 IPR001160 Peptidase M20C, Xaa-His dipeptidase DOE58_RS18185 IPR017509 Putative peptide chain release factor H DOE58_RS18185 IPR000352 Peptide chain release factor class I DOE58_RS18190 IPR036025 tRNA-splicing ligase RtcB-like superfamily DOE58_RS18195 IPR001126 UmuC domain DOE58_RS18195 IPR024728 DNA polymerase type-Y, HhH motif DOE58_RS18195 IPR022880 DNA polymerase IV DOE58_RS18195 IPR017961 DNA polymerase, Y-family, little finger domain DOE58_RS18195 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOE58_RS18200 IPR005490 L,D-transpeptidase catalytic domain DOE58_RS18200 IPR038063 L,D-transpeptidase catalytic domain-like DOE58_RS18205 IPR026869 Putative glutamine amidotransferase type 2 DOE58_RS18205 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS18205 IPR017932 Glutamine amidotransferase type 2 domain DOE58_RS18210 IPR035461 GmhA/DiaA DOE58_RS18210 IPR004515 Phosphoheptose isomerase DOE58_RS18210 IPR001347 Sugar isomerase (SIS) DOE58_RS18215 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOE58_RS18215 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE58_RS18215 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE58_RS18215 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOE58_RS18215 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE58_RS18215 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type DOE58_RS18215 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE58_RS18220 IPR036526 Carbon-nitrogen hydrolase superfamily DOE58_RS18220 IPR003010 Carbon-nitrogen hydrolase DOE58_RS18220 IPR001110 Uncharacterised protein family UPF0012, conserved site DOE58_RS18265 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE58_RS18265 IPR011008 Dimeric alpha-beta barrel DOE58_RS18265 IPR000485 AsnC-type HTH domain DOE58_RS18265 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS18265 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE58_RS18265 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS18265 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS18265 IPR019888 Transcription regulator AsnC-type DOE58_RS18310 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS18310 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS18310 IPR000847 Transcription regulator HTH, LysR DOE58_RS18310 IPR005119 LysR, substrate-binding DOE58_RS18330 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS18330 IPR025885 PapC, N-terminal domain DOE58_RS18330 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS18330 IPR000015 Outer membrane usher protein DOE58_RS18330 IPR025949 PapC-like, C-terminal domain DOE58_RS18330 IPR037224 PapC, N-terminal domain superfamily DOE58_RS18335 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS18335 IPR008962 PapD-like superfamily DOE58_RS18335 IPR013783 Immunoglobulin-like fold DOE58_RS18335 IPR018046 Pili assembly chaperone, conserved site DOE58_RS18335 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS18335 IPR001829 Pili assembly chaperone, bacterial DOE58_RS18335 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS18370 IPR022385 Rhs repeat-associated core DOE58_RS18370 IPR001826 RHS protein DOE58_RS18370 IPR025479 Domain of unknown function DUF4329 DOE58_RS18370 IPR031325 RHS repeat DOE58_RS18370 IPR006530 YD repeat DOE58_RS18380 IPR031325 RHS repeat DOE58_RS18380 IPR008727 PAAR motif DOE58_RS18380 IPR022385 Rhs repeat-associated core DOE58_RS18380 IPR006530 YD repeat DOE58_RS18390 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DOE58_RS18390 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DOE58_RS18390 IPR006531 Gp5 N-terminal DOE58_RS18390 IPR037026 Vgr protein, OB-fold domain superfamily DOE58_RS18415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS18415 IPR010623 Type VI secretion system IcmF, C-terminal DOE58_RS18415 IPR025743 IcmF-related, N-terminal domain DOE58_RS18415 IPR009612 IcmF-related DOE58_RS18415 IPR017731 Type VI secretion system, IcmF DOE58_RS18435 IPR008722 Outer membrane porin F, N-terminal DOE58_RS18435 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DOE58_RS18435 IPR006690 Outer membrane protein, OmpA-like, conserved site DOE58_RS18435 IPR006664 Outer membrane protein, bacterial DOE58_RS18435 IPR036737 OmpA-like domain superfamily DOE58_RS18435 IPR006665 OmpA-like domain DOE58_RS18440 IPR010263 Type VI secretion protein, VC_A0114 DOE58_RS18465 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DOE58_RS18470 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DOE58_RS18480 IPR004176 Clp, N-terminal DOE58_RS18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS18480 IPR036628 Clp, N-terminal domain superfamily DOE58_RS18480 IPR017729 Type VI secretion system, ATPase ClpV1 DOE58_RS18480 IPR003959 ATPase, AAA-type, core DOE58_RS18480 IPR041546 ClpA/ClpB, AAA lid domain DOE58_RS18480 IPR028299 ClpA/B, conserved site 2 DOE58_RS18480 IPR018368 ClpA/B, conserved site 1 DOE58_RS18480 IPR019489 Clp ATPase, C-terminal DOE58_RS18480 IPR003593 AAA+ ATPase domain DOE58_RS18480 IPR001270 ClpA/B family DOE58_RS18495 IPR007048 IraD/Gp25-like DOE58_RS18495 IPR017737 Type VI secretion system-related protein DOE58_RS18500 IPR010272 Type VI secretion system, TssF-like DOE58_RS18520 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE58_RS18520 IPR036397 Ribonuclease H superfamily DOE58_RS18520 IPR006309 DNA polymerase 3, epsilon subunit DOE58_RS18520 IPR012337 Ribonuclease H-like superfamily DOE58_RS18520 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DOE58_RS18525 IPR022892 Ribonuclease HI DOE58_RS18525 IPR012337 Ribonuclease H-like superfamily DOE58_RS18525 IPR002156 Ribonuclease H domain DOE58_RS18525 IPR036397 Ribonuclease H superfamily DOE58_RS18530 IPR026669 Arsenite methyltransferase-like DOE58_RS18530 IPR013216 Methyltransferase type 11 DOE58_RS18530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS18535 IPR017782 Hydroxyacylglutathione hydrolase DOE58_RS18535 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DOE58_RS18535 IPR001279 Metallo-beta-lactamase DOE58_RS18535 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DOE58_RS18535 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS18540 IPR036779 LysM domain superfamily DOE58_RS18540 IPR018392 LysM domain DOE58_RS18540 IPR023346 Lysozyme-like domain superfamily DOE58_RS18540 IPR000189 Prokaryotic transglycosylase, active site DOE58_RS18540 IPR008258 Transglycosylase SLT domain 1 DOE58_RS18545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS18545 IPR013216 Methyltransferase type 11 DOE58_RS18550 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE58_RS18550 IPR005135 Endonuclease/exonuclease/phosphatase DOE58_RS18550 IPR022958 Uncharacterised protein family UPF0294 DOE58_RS18555 IPR020846 Major facilitator superfamily domain DOE58_RS18555 IPR036259 MFS transporter superfamily DOE58_RS18555 IPR011701 Major facilitator superfamily DOE58_RS18560 IPR005119 LysR, substrate-binding DOE58_RS18560 IPR000847 Transcription regulator HTH, LysR DOE58_RS18560 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS18560 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS18565 IPR018170 Aldo/keto reductase, conserved site DOE58_RS18565 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE58_RS18565 IPR020471 Aldo/keto reductase DOE58_RS18565 IPR023210 NADP-dependent oxidoreductase domain DOE58_RS18605 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DOE58_RS18605 IPR006543 Histidinol-phosphate phosphatase DOE58_RS18605 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DOE58_RS18605 IPR023214 HAD superfamily DOE58_RS18605 IPR036412 HAD-like superfamily DOE58_RS18610 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DOE58_RS18610 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DOE58_RS18610 IPR026253 Methionine import ATP-binding protein MetN DOE58_RS18610 IPR003593 AAA+ ATPase domain DOE58_RS18610 IPR017871 ABC transporter, conserved site DOE58_RS18610 IPR003439 ABC transporter-like DOE58_RS18610 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria DOE58_RS18610 IPR018449 NIL domain DOE58_RS18610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS18615 IPR035906 MetI-like superfamily DOE58_RS18615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS18620 IPR004872 Lipoprotein NlpA family DOE58_RS18625 IPR030852 Outer membrane lipoprotein RcsF DOE58_RS18630 IPR036414 YaeB, N-terminal domain superfamily DOE58_RS18630 IPR036413 YaeB-like superfamily DOE58_RS18630 IPR040372 YaeB-like DOE58_RS18630 IPR023370 TrmO-like, N-terminal domain DOE58_RS18630 IPR041369 TrmO, C-terminal DOE58_RS18630 IPR023368 Uncharacterised protein family UPF0066, conserved site DOE58_RS18635 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE58_RS18635 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE58_RS18635 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DOE58_RS18635 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DOE58_RS18635 IPR033730 Prokaryote proline-tRNA ligase core domain DOE58_RS18635 IPR002316 Proline-tRNA ligase, class IIa DOE58_RS18635 IPR004154 Anticodon-binding DOE58_RS18635 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS18635 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DOE58_RS18635 IPR036621 Anticodon-binding domain superfamily DOE58_RS18640 IPR007298 Copper resistance lipoprotein NlpE DOE58_RS18640 IPR033450 NlpE, C-terminal OB domain DOE58_RS18640 IPR038139 NlpE, C-terminal domain superfamily DOE58_RS18645 IPR000352 Peptide chain release factor class I DOE58_RS18650 IPR009822 YaeQ DOE58_RS18650 IPR038590 YaeQ superfamily DOE58_RS18650 IPR011335 Restriction endonuclease type II-like DOE58_RS18655 IPR009624 Uncharacterised protein family UPF0253 DOE58_RS18660 IPR038626 Rof-like superfamily DOE58_RS18660 IPR009778 Modulator of Rho-dependent transcription termination DOE58_RS18660 IPR023534 Rof/RNase P-like DOE58_RS18665 IPR012094 tRNA(Ile)-lysidine synthase DOE58_RS18665 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DOE58_RS18665 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DOE58_RS18665 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal DOE58_RS18665 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain DOE58_RS18665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS18670 IPR037523 Vicinal oxygen chelate (VOC) domain DOE58_RS18670 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE58_RS18670 IPR037478 YwkD-like domain DOE58_RS18670 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE58_RS18675 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE58_RS18675 IPR011193 Ornithine/lysine/arginine decarboxylase DOE58_RS18675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS18675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS18675 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS18675 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE58_RS18675 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE58_RS18675 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE58_RS18680 IPR004302 Cellulose/chitin-binding protein, N-terminal DOE58_RS18680 IPR041029 N-acetylglucosamine binding protein A domain 2 DOE58_RS18680 IPR020879 N-acetylglucosamine-binding protein A DOE58_RS18680 IPR014756 Immunoglobulin E-set DOE58_RS18685 IPR001095 Acetyl-CoA carboxylase, alpha subunit DOE58_RS18685 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS18685 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DOE58_RS18690 IPR004013 PHP domain DOE58_RS18690 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DOE58_RS18690 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain DOE58_RS18690 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DOE58_RS18690 IPR029460 DNA polymerase, helix-hairpin-helix motif DOE58_RS18690 IPR040982 DNA polymerase III alpha subunit finger domain DOE58_RS18690 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE58_RS18690 IPR016195 Polymerase/histidinol phosphatase-like DOE58_RS18690 IPR004805 DNA polymerase III, alpha subunit DOE58_RS18695 IPR012337 Ribonuclease H-like superfamily DOE58_RS18695 IPR022898 Ribonuclease HII DOE58_RS18695 IPR001352 Ribonuclease HII/HIII DOE58_RS18695 IPR024567 Ribonuclease HII/HIII domain DOE58_RS18695 IPR036397 Ribonuclease H superfamily DOE58_RS18700 IPR003835 Glycosyl transferase, family 19 DOE58_RS18705 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DOE58_RS18705 IPR011004 Trimeric LpxA-like superfamily DOE58_RS18705 IPR018357 Hexapeptide transferase, conserved site DOE58_RS18705 IPR001451 Hexapeptide repeat DOE58_RS18705 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal DOE58_RS18705 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily DOE58_RS18710 IPR029069 HotDog domain superfamily DOE58_RS18710 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DOE58_RS18710 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DOE58_RS18715 IPR001451 Hexapeptide repeat DOE58_RS18715 IPR018357 Hexapeptide transferase, conserved site DOE58_RS18715 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD DOE58_RS18715 IPR011004 Trimeric LpxA-like superfamily DOE58_RS18715 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region DOE58_RS18720 IPR005632 Chaperone protein Skp DOE58_RS18720 IPR024930 Skp domain superfamily DOE58_RS18725 IPR023707 Outer membrane protein assembly factor BamA DOE58_RS18725 IPR034746 POTRA domain DOE58_RS18725 IPR010827 POTRA domain, BamA/TamA-like DOE58_RS18725 IPR039910 Surface antigen D15-like DOE58_RS18725 IPR000184 Bacterial surface antigen (D15) DOE58_RS18730 IPR008915 Peptidase M50 DOE58_RS18730 IPR001478 PDZ domain DOE58_RS18730 IPR041489 PDZ domain 6 DOE58_RS18730 IPR036034 PDZ superfamily DOE58_RS18730 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase DOE58_RS18735 IPR000374 Phosphatidate cytidylyltransferase DOE58_RS18740 IPR001441 Decaprenyl diphosphate synthase-like DOE58_RS18740 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DOE58_RS18740 IPR036424 Decaprenyl diphosphate synthase-like superfamily DOE58_RS18750 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DOE58_RS18750 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DOE58_RS18750 IPR026877 DXP reductoisomerase C-terminal domain DOE58_RS18750 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DOE58_RS18750 IPR036291 NAD(P)-binding domain superfamily DOE58_RS18750 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DOE58_RS18755 IPR002661 Ribosome recycling factor DOE58_RS18755 IPR023584 Ribosome recycling factor domain DOE58_RS18755 IPR036191 RRF superfamily DOE58_RS18760 IPR011817 Uridylate kinase DOE58_RS18760 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS18760 IPR015963 Uridylate kinase, bacteria DOE58_RS18760 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS18765 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DOE58_RS18765 IPR009060 UBA-like superfamily DOE58_RS18765 IPR018101 Translation elongation factor Ts, conserved site DOE58_RS18765 IPR001816 Translation elongation factor EFTs/EF1B DOE58_RS18765 IPR036402 Elongation factor Ts, dimerisation domain superfamily DOE58_RS18775 IPR018130 Ribosomal protein S2, conserved site DOE58_RS18775 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DOE58_RS18775 IPR001865 Ribosomal protein S2 DOE58_RS18775 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DOE58_RS18780 IPR001714 Peptidase M24, methionine aminopeptidase DOE58_RS18780 IPR036005 Creatinase/aminopeptidase-like DOE58_RS18780 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DOE58_RS18780 IPR000994 Peptidase M24 DOE58_RS18790 IPR002934 Polymerase, nucleotidyl transferase domain DOE58_RS18790 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DOE58_RS18790 IPR006674 HD domain DOE58_RS18790 IPR003607 HD/PDEase domain DOE58_RS18790 IPR002912 ACT domain DOE58_RS18790 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme DOE58_RS18795 IPR011004 Trimeric LpxA-like superfamily DOE58_RS18795 IPR018357 Hexapeptide transferase, conserved site DOE58_RS18795 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily DOE58_RS18795 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DOE58_RS18795 IPR001451 Hexapeptide repeat DOE58_RS18795 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DOE58_RS18800 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS18800 IPR005829 Sugar transporter, conserved site DOE58_RS18800 IPR011701 Major facilitator superfamily DOE58_RS18800 IPR036259 MFS transporter superfamily DOE58_RS18800 IPR020846 Major facilitator superfamily domain DOE58_RS18800 IPR005828 Major facilitator, sugar transporter-like DOE58_RS18805 IPR020911 Uncharacterised protein family UPF0325 DOE58_RS18815 IPR025736 PucR C-terminal helix-turn-helix domain DOE58_RS18815 IPR008599 Putative sugar diacid recognition DOE58_RS18815 IPR042070 PucR C-terminal helix-turn-helix domain superfamily DOE58_RS18815 IPR041522 CdaR, GGDEF-like domain DOE58_RS18820 IPR001478 PDZ domain DOE58_RS18820 IPR036034 PDZ superfamily DOE58_RS18820 IPR011782 Peptidase S1C, Do DOE58_RS18820 IPR009003 Peptidase S1, PA clan DOE58_RS18820 IPR001940 Peptidase S1C DOE58_RS18825 IPR006674 HD domain DOE58_RS18825 IPR003607 HD/PDEase domain DOE58_RS18825 IPR020779 dNTP triphosphohydrolase, type 1 DOE58_RS18825 IPR026875 Phosphohydrolase-associated domain DOE58_RS18825 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily DOE58_RS18825 IPR006261 dNTP triphosphohydrolase DOE58_RS18830 IPR010049 MTA/SAH nucleosidase DOE58_RS18830 IPR000845 Nucleoside phosphorylase domain DOE58_RS18830 IPR035994 Nucleoside phosphorylase superfamily DOE58_RS18835 IPR023544 ABC transporter, vitamin B12-binding protein DOE58_RS18835 IPR002491 ABC transporter periplasmic binding domain DOE58_RS18840 IPR005115 Uncharacterised domain UPF0126 DOE58_RS18845 IPR000361 FeS cluster biogenesis DOE58_RS18845 IPR017870 FeS cluster insertion, C-terminal, conserved site DOE58_RS18845 IPR016092 FeS cluster insertion protein DOE58_RS18845 IPR035903 HesB-like domain superfamily DOE58_RS18845 IPR023063 FeS cluster insertion protein ErpA DOE58_RS18850 IPR023861 Chloride channel, ClcA DOE58_RS18850 IPR001807 Chloride channel, voltage gated DOE58_RS18850 IPR014743 Chloride channel, core DOE58_RS18855 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DOE58_RS18855 IPR005814 Aminotransferase class-III DOE58_RS18855 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS18855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS18855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS18860 IPR000522 ABC transporter, permease protein, BtuC-like DOE58_RS18860 IPR037294 ABC transporter, BtuC-like DOE58_RS18865 IPR002491 ABC transporter periplasmic binding domain DOE58_RS18870 IPR003593 AAA+ ATPase domain DOE58_RS18870 IPR003439 ABC transporter-like DOE58_RS18870 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS18870 IPR017871 ABC transporter, conserved site DOE58_RS18875 IPR010917 TonB-dependent receptor, conserved site DOE58_RS18875 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS18875 IPR012910 TonB-dependent receptor, plug domain DOE58_RS18875 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS18875 IPR039423 TonB-dependent receptor-like DOE58_RS18875 IPR010105 TonB-dependent siderophore receptor DOE58_RS18875 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS18875 IPR010916 TonB box, conserved site DOE58_RS18880 IPR023346 Lysozyme-like domain superfamily DOE58_RS18880 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain DOE58_RS18880 IPR011813 Penicillin-binding protein 1B DOE58_RS18880 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS18880 IPR001264 Glycosyl transferase, family 51 DOE58_RS18880 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS18880 IPR028166 Bifunctional transglycosylase second domain DOE58_RS18880 IPR036950 Penicillin binding protein transglycosylase domain DOE58_RS18885 IPR007502 Helicase-associated domain DOE58_RS18885 IPR011545 DEAD/DEAH box helicase domain DOE58_RS18885 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS18885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS18885 IPR010225 ATP-dependent helicase HrpB DOE58_RS18885 IPR001650 Helicase, C-terminal DOE58_RS18885 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DOE58_RS18890 IPR014051 Phosphoesterase, HXTX DOE58_RS18890 IPR009097 Cyclic phosphodiesterase DOE58_RS18890 IPR004175 RNA 2',3'-cyclic phosphodiesterase DOE58_RS18895 IPR040452 Sugar fermentation stimulation protein, C-terminal DOE58_RS18895 IPR041465 SfsA, N-terminal OB domain DOE58_RS18895 IPR005224 Sugar fermentation stimulation protein DOE58_RS18900 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DOE58_RS18900 IPR000962 Zinc finger, DksA/TraR C4-type DOE58_RS18900 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DOE58_RS18900 IPR037187 DksA, N-terminal domain superfamily DOE58_RS18900 IPR012784 RNA polymerase-binding transcription factor DksA DOE58_RS18905 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DOE58_RS18905 IPR022380 Glutamyl-Q tRNA(Asp) synthetase DOE58_RS18905 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DOE58_RS18905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS18910 IPR025866 Polymerase A arginine-rich C-terminal domain DOE58_RS18910 IPR010206 Poly(A) polymerase I DOE58_RS18910 IPR002646 Poly A polymerase, head domain DOE58_RS18910 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DOE58_RS18915 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DOE58_RS18915 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DOE58_RS18925 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS18925 IPR001829 Pili assembly chaperone, bacterial DOE58_RS18925 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS18925 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS18925 IPR008962 PapD-like superfamily DOE58_RS18925 IPR013783 Immunoglobulin-like fold DOE58_RS18925 IPR018046 Pili assembly chaperone, conserved site DOE58_RS18930 IPR037224 PapC, N-terminal domain superfamily DOE58_RS18930 IPR025885 PapC, N-terminal domain DOE58_RS18930 IPR025949 PapC-like, C-terminal domain DOE58_RS18930 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS18930 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS18930 IPR000015 Outer membrane usher protein DOE58_RS18935 IPR000259 Fimbrial-type adhesion domain DOE58_RS18935 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18935 IPR008966 Adhesion domain superfamily DOE58_RS18940 IPR008966 Adhesion domain superfamily DOE58_RS18940 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18940 IPR000259 Fimbrial-type adhesion domain DOE58_RS18945 IPR000259 Fimbrial-type adhesion domain DOE58_RS18945 IPR008966 Adhesion domain superfamily DOE58_RS18945 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18950 IPR017014 Fimbrial-like protein YadC DOE58_RS18950 IPR008966 Adhesion domain superfamily DOE58_RS18950 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18950 IPR000259 Fimbrial-type adhesion domain DOE58_RS18955 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS18955 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS18955 IPR003700 Ketopantoate hydroxymethyltransferase DOE58_RS18960 IPR003721 Pantoate-beta-alanine ligase DOE58_RS18960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS18960 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain DOE58_RS18965 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS18965 IPR003190 Aspartate decarboxylase DOE58_RS18970 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DOE58_RS18970 IPR002509 NodB homology domain DOE58_RS18975 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily DOE58_RS18975 IPR033887 PTS system mannose/sorbose specific IIA subunit DOE58_RS18975 IPR004701 Phosphotransferase system, mannose-type IIA component DOE58_RS18985 IPR001829 Pili assembly chaperone, bacterial DOE58_RS18985 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS18985 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS18985 IPR008962 PapD-like superfamily DOE58_RS18985 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS18985 IPR018046 Pili assembly chaperone, conserved site DOE58_RS18985 IPR013783 Immunoglobulin-like fold DOE58_RS18990 IPR000015 Outer membrane usher protein DOE58_RS18990 IPR025885 PapC, N-terminal domain DOE58_RS18990 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS18990 IPR037224 PapC, N-terminal domain superfamily DOE58_RS18990 IPR025949 PapC-like, C-terminal domain DOE58_RS18990 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS18995 IPR008966 Adhesion domain superfamily DOE58_RS18995 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS18995 IPR000259 Fimbrial-type adhesion domain DOE58_RS19000 IPR013525 ABC-2 type transporter DOE58_RS19000 IPR000412 ABC-2 transporter DOE58_RS19005 IPR003439 ABC transporter-like DOE58_RS19005 IPR003593 AAA+ ATPase domain DOE58_RS19005 IPR017871 ABC transporter, conserved site DOE58_RS19005 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19010 IPR036874 Carbonic anhydrase superfamily DOE58_RS19010 IPR001765 Carbonic anhydrase DOE58_RS19010 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DOE58_RS19015 IPR005904 Hypoxanthine phosphoribosyl transferase DOE58_RS19015 IPR029057 Phosphoribosyltransferase-like DOE58_RS19015 IPR000836 Phosphoribosyltransferase domain DOE58_RS19020 IPR017511 PQQ-dependent membrane bound dehydrogenase DOE58_RS19020 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOE58_RS19020 IPR001479 Quinoprotein dehydrogenase, conserved site DOE58_RS19020 IPR002372 Pyrrolo-quinoline quinone repeat DOE58_RS19020 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DOE58_RS19025 IPR011707 Multicopper oxidase, type 3 DOE58_RS19025 IPR001117 Multicopper oxidase, type 1 DOE58_RS19025 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS19025 IPR002355 Multicopper oxidase, copper-binding site DOE58_RS19025 IPR008972 Cupredoxin DOE58_RS19025 IPR011706 Multicopper oxidase, type 2 DOE58_RS19030 IPR038432 PulS/OutS-like superfamily DOE58_RS19030 IPR019114 Chaperone lipoprotein, PulS/OutS-like DOE58_RS19035 IPR037163 Spermidine synthase, tetramerisation domain superfamily DOE58_RS19035 IPR035246 Spermidine synthase, tetramerisation domain DOE58_RS19035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS19035 IPR030373 Polyamine biosynthesis domain, conserved site DOE58_RS19035 IPR001045 Spermidine/spermine synthases DOE58_RS19035 IPR030374 Polyamine biosynthesis domain DOE58_RS19040 IPR009165 S-adenosylmethionine decarboxylase, bacterial DOE58_RS19040 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic DOE58_RS19040 IPR016067 S-adenosylmethionine decarboxylase, core DOE58_RS19045 IPR037171 NagB/RpiA transferase-like DOE58_RS19045 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19045 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS19045 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19045 IPR014036 DeoR C-terminal sensor domain DOE58_RS19045 IPR001034 DeoR-type HTH domain DOE58_RS19050 IPR005255 PdxA family DOE58_RS19055 IPR031475 Nucleotide-binding C-terminal domain DOE58_RS19055 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DOE58_RS19055 IPR042213 Nucleotide-binding, C-terminal domain superfamily DOE58_RS19055 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DOE58_RS19060 IPR004684 2-keto-3-deoxygluconate permease DOE58_RS19065 IPR008249 Uncharacterised protein family UPF0231 DOE58_RS19070 IPR015933 Aconitase B, HEAT-like domain DOE58_RS19070 IPR036288 Aconitase B, HEAT-like domain superfamily DOE58_RS19070 IPR015929 Aconitase B, swivel DOE58_RS19070 IPR015932 Aconitase, domain 2 DOE58_RS19070 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE58_RS19070 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE58_RS19070 IPR004406 Aconitase B DOE58_RS19070 IPR036008 Aconitase, iron-sulfur domain DOE58_RS19070 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE58_RS19070 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE58_RS19080 IPR021728 Protein of unknown function DUF3300 DOE58_RS19095 IPR006258 Dihydrolipoamide dehydrogenase DOE58_RS19095 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE58_RS19095 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DOE58_RS19095 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE58_RS19095 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS19095 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE58_RS19095 IPR023753 FAD/NAD(P)-binding domain DOE58_RS19100 IPR000089 Biotin/lipoyl attachment DOE58_RS19100 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DOE58_RS19100 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DOE58_RS19100 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DOE58_RS19100 IPR004167 Peripheral subunit-binding domain DOE58_RS19100 IPR036625 E3-binding domain superfamily DOE58_RS19100 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DOE58_RS19100 IPR011053 Single hybrid motif DOE58_RS19105 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal DOE58_RS19105 IPR004660 Pyruvate dehydrogenase E1 component DOE58_RS19105 IPR041621 Pyruvate dehydrogenase E1 component, middle domain DOE58_RS19105 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DOE58_RS19105 IPR005474 Transketolase, N-terminal DOE58_RS19105 IPR029061 Thiamin diphosphate-binding fold DOE58_RS19110 IPR000524 Transcription regulator HTH, GntR DOE58_RS19110 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19110 IPR011711 GntR, C-terminal DOE58_RS19110 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19110 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS19115 IPR004840 Amino acid permease, conserved site DOE58_RS19115 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS19120 IPR001927 Sodium:galactoside symporter DOE58_RS19120 IPR036259 MFS transporter superfamily DOE58_RS19120 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS19120 IPR039672 Lactose permease-like DOE58_RS19125 IPR006710 Glycoside hydrolase, family 43 DOE58_RS19125 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily DOE58_RS19125 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain DOE58_RS19125 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE58_RS19130 IPR031347 Protein AmpE DOE58_RS19135 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DOE58_RS19135 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DOE58_RS19140 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily DOE58_RS19140 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DOE58_RS19140 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DOE58_RS19140 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DOE58_RS19140 IPR004393 Nicotinate-nucleotide pyrophosphorylase DOE58_RS19140 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DOE58_RS19140 IPR013785 Aldolase-type TIM barrel DOE58_RS19150 IPR012902 Prokaryotic N-terminal methylation site DOE58_RS19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19155 IPR007831 General secretory system II, protein E, N-terminal DOE58_RS19155 IPR001482 Type II/IV secretion system protein DOE58_RS19160 IPR042094 Type II secretion system F domain superfamily DOE58_RS19160 IPR018076 Type II secretion system F domain DOE58_RS19160 IPR001992 Type II secretion system conserved site DOE58_RS19160 IPR003004 GspF/PilC family DOE58_RS19165 IPR001093 IMP dehydrogenase/GMP reductase DOE58_RS19165 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DOE58_RS19165 IPR013785 Aldolase-type TIM barrel DOE58_RS19165 IPR005993 GMP reductase DOE58_RS19170 IPR001977 Dephospho-CoA kinase DOE58_RS19170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19175 IPR009777 Cell division protein ZapD DOE58_RS19175 IPR036268 ZapD domain superfamily DOE58_RS19175 IPR027462 Z ring-associated protein D, C-terminal DOE58_RS19180 IPR013088 Zinc finger, NHR/GATA-type DOE58_RS19180 IPR005584 DNA gyrase inhibitor YacG DOE58_RS19195 IPR020084 NUDIX hydrolase, conserved site DOE58_RS19195 IPR003561 Mutator MutT DOE58_RS19195 IPR000086 NUDIX hydrolase domain DOE58_RS19195 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS19195 IPR020476 NUDIX hydrolase DOE58_RS19200 IPR036670 SecA, preprotein cross-linking domain superfamily DOE58_RS19200 IPR011116 SecA Wing/Scaffold DOE58_RS19200 IPR004027 SEC-C motif DOE58_RS19200 IPR000185 Protein translocase subunit SecA DOE58_RS19200 IPR020937 SecA conserved site DOE58_RS19200 IPR011115 SecA DEAD-like, N-terminal DOE58_RS19200 IPR036266 SecA, Wing/Scaffold superfamily DOE58_RS19200 IPR014018 SecA motor DEAD DOE58_RS19200 IPR011130 SecA, preprotein cross-linking domain DOE58_RS19200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19205 IPR009502 Secretion monitor DOE58_RS19210 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS19210 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DOE58_RS19210 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DOE58_RS19210 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DOE58_RS19215 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DOE58_RS19215 IPR020805 Cell division protein FtsZ, conserved site DOE58_RS19215 IPR024757 Cell division protein FtsZ, C-terminal DOE58_RS19215 IPR008280 Tubulin/FtsZ, C-terminal DOE58_RS19215 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DOE58_RS19215 IPR003008 Tubulin/FtsZ, GTPase domain DOE58_RS19215 IPR000158 Cell division protein FtsZ DOE58_RS19220 IPR003494 SHS2 domain inserted in FtsA DOE58_RS19220 IPR020823 Cell division protein FtsA DOE58_RS19225 IPR034746 POTRA domain DOE58_RS19225 IPR013685 POTRA domain, FtsQ-type DOE58_RS19225 IPR005548 Cell division protein FtsQ/DivIB DOE58_RS19225 IPR026579 Cell division protein FtsQ DOE58_RS19230 IPR011095 D-alanine--D-alanine ligase, C-terminal DOE58_RS19230 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS19230 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DOE58_RS19230 IPR005905 D-alanine--D-alanine ligase DOE58_RS19230 IPR011761 ATP-grasp fold DOE58_RS19230 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS19230 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DOE58_RS19235 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DOE58_RS19235 IPR000713 Mur ligase, N-terminal catalytic domain DOE58_RS19235 IPR013221 Mur ligase, central DOE58_RS19235 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS19235 IPR004101 Mur ligase, C-terminal DOE58_RS19235 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS19240 IPR007235 Glycosyl transferase, family 28, C-terminal DOE58_RS19240 IPR004276 Glycosyltransferase family 28, N-terminal domain DOE58_RS19240 IPR006009 N-acetylglucosaminyltransferase, MurG DOE58_RS19245 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DOE58_RS19245 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DOE58_RS19245 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DOE58_RS19250 IPR013221 Mur ligase, central DOE58_RS19250 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DOE58_RS19250 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS19250 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS19250 IPR004101 Mur ligase, C-terminal DOE58_RS19255 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DOE58_RS19255 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DOE58_RS19255 IPR000715 Glycosyl transferase, family 4 DOE58_RS19260 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DOE58_RS19260 IPR035911 MurE/MurF, N-terminal DOE58_RS19260 IPR000713 Mur ligase, N-terminal catalytic domain DOE58_RS19260 IPR004101 Mur ligase, C-terminal DOE58_RS19260 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS19260 IPR013221 Mur ligase, central DOE58_RS19260 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS19265 IPR035911 MurE/MurF, N-terminal DOE58_RS19265 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase DOE58_RS19265 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS19265 IPR013221 Mur ligase, central DOE58_RS19265 IPR000713 Mur ligase, N-terminal catalytic domain DOE58_RS19265 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS19265 IPR004101 Mur ligase, C-terminal DOE58_RS19270 IPR001460 Penicillin-binding protein, transpeptidase DOE58_RS19270 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DOE58_RS19270 IPR012338 Beta-lactamase/transpeptidase-like DOE58_RS19270 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DOE58_RS19270 IPR005311 Penicillin-binding protein, dimerisation domain DOE58_RS19275 IPR011922 Cell division protein FtsL DOE58_RS19280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS19280 IPR002903 Ribosomal RNA small subunit methyltransferase H DOE58_RS19280 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily DOE58_RS19285 IPR003444 Transcriptional regulator MraZ DOE58_RS19285 IPR035644 MraZ, C-terminal DOE58_RS19285 IPR020603 MraZ domain DOE58_RS19285 IPR035642 MraZ, N-terminal DOE58_RS19285 IPR007159 SpoVT-AbrB domain DOE58_RS19285 IPR037914 SpoVT-AbrB domain superfamily DOE58_RS19285 IPR038619 MraZ superfamily DOE58_RS19290 IPR012781 D-fructose-responsive transcription factor DOE58_RS19290 IPR028082 Periplasmic binding protein-like I DOE58_RS19290 IPR001761 Periplasmic binding protein/LacI sugar binding domain DOE58_RS19290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS19290 IPR000843 LacI-type HTH domain DOE58_RS19295 IPR019455 Acetolactate synthase, small subunit, C-terminal DOE58_RS19295 IPR002912 ACT domain DOE58_RS19295 IPR039557 AHAS, ACT domain DOE58_RS19295 IPR004789 Acetolactate synthase, small subunit DOE58_RS19295 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DOE58_RS19300 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS19300 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE58_RS19300 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS19300 IPR029061 Thiamin diphosphate-binding fold DOE58_RS19300 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE58_RS19300 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS19300 IPR000399 TPP-binding enzyme, conserved site DOE58_RS19300 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE58_RS19305 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19305 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19305 IPR005119 LysR, substrate-binding DOE58_RS19305 IPR000847 Transcription regulator HTH, LysR DOE58_RS19310 IPR012570 Leucine operon leader peptide DOE58_RS19315 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DOE58_RS19315 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DOE58_RS19315 IPR005671 2-isopropylmalate synthase, bacterial-type DOE58_RS19315 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DOE58_RS19315 IPR013785 Aldolase-type TIM barrel DOE58_RS19315 IPR000891 Pyruvate carboxyltransferase DOE58_RS19320 IPR004429 Isopropylmalate dehydrogenase DOE58_RS19320 IPR024084 Isopropylmalate dehydrogenase-like domain DOE58_RS19320 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DOE58_RS19325 IPR036008 Aconitase, iron-sulfur domain DOE58_RS19325 IPR033941 3-Isopropylmalate dehydratase, catalytic domain DOE58_RS19325 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DOE58_RS19325 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DOE58_RS19325 IPR004430 3-isopropylmalate dehydratase, large subunit DOE58_RS19325 IPR018136 Aconitase family, 4Fe-4S cluster binding site DOE58_RS19330 IPR004431 3-isopropylmalate dehydratase, small subunit DOE58_RS19330 IPR033940 3-isopropylmalate dehydratase, swivel domain DOE58_RS19330 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain DOE58_RS19330 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DOE58_RS19340 IPR023767 Transcriptional regulator SgrR DOE58_RS19340 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19340 IPR039424 Solute-binding protein family 5 DOE58_RS19340 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE58_RS19340 IPR000914 Solute-binding protein family 5 domain DOE58_RS19345 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter DOE58_RS19345 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria DOE58_RS19345 IPR006061 Solute-binding family 1, conserved site DOE58_RS19350 IPR005947 Thiamine ABC transporter, permease protein DOE58_RS19350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS19350 IPR035906 MetI-like superfamily DOE58_RS19355 IPR003593 AAA+ ATPase domain DOE58_RS19355 IPR003439 ABC transporter-like DOE58_RS19355 IPR017871 ABC transporter, conserved site DOE58_RS19355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19355 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ DOE58_RS19360 IPR032818 DedA family DOE58_RS19360 IPR032816 SNARE associated Golgi protein DOE58_RS19365 IPR037923 Transcription regulator HTH-like DOE58_RS19365 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS19365 IPR018062 HTH domain AraC-type, conserved site DOE58_RS19365 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS19365 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS19365 IPR009057 Homeobox-like domain superfamily DOE58_RS19370 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS19370 IPR005929 Ribulokinase DOE58_RS19375 IPR003762 L-arabinose isomerase DOE58_RS19375 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily DOE58_RS19375 IPR038583 L-arabinose isomerase, N-terminal domain superfamily DOE58_RS19375 IPR024664 L-arabinose isomerase, C-terminal DOE58_RS19375 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE58_RS19380 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS19380 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD DOE58_RS19380 IPR004661 L-ribulose-5-phosphate 4-epimerase DOE58_RS19380 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS19400 IPR023211 DNA polymerase, palm domain superfamily DOE58_RS19400 IPR036397 Ribonuclease H superfamily DOE58_RS19400 IPR017964 DNA-directed DNA polymerase, family B, conserved site DOE58_RS19400 IPR006172 DNA-directed DNA polymerase, family B DOE58_RS19400 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain DOE58_RS19400 IPR042087 DNA polymerase family B, C-terminal domain DOE58_RS19400 IPR012337 Ribonuclease H-like superfamily DOE58_RS19400 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain DOE58_RS19405 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS19405 IPR001650 Helicase, C-terminal DOE58_RS19405 IPR023949 RNA polymerase-associated protein RapA DOE58_RS19405 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS19405 IPR022737 RNA polymerase recycling, bacterial, C-terminal DOE58_RS19405 IPR038718 SNF2-like, N-terminal domain superfamily DOE58_RS19405 IPR000330 SNF2-related, N-terminal domain DOE58_RS19405 IPR040765 RapA, N-terminal Tudor like domain 1 DOE58_RS19405 IPR040766 RapA, N-terminal Tudor-like domain 2 DOE58_RS19410 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DOE58_RS19410 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS19410 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS19410 IPR006225 Pseudouridine synthase, RluC/RluD DOE58_RS19415 IPR029024 TerB-like DOE58_RS19415 IPR036869 Chaperone J-domain superfamily DOE58_RS19415 IPR023749 Co-chaperone DjlA DOE58_RS19415 IPR001623 DnaJ domain DOE58_RS19415 IPR007791 Co-chaperone DjlA, N-terminal DOE58_RS19420 IPR020889 LPS-assembly protein LptD DOE58_RS19420 IPR007543 LptD, C-terminal DOE58_RS19420 IPR005653 Organic solvent tolerance-like, N-terminal DOE58_RS19425 IPR015391 SurA N-terminal DOE58_RS19425 IPR027304 Trigger factor/SurA domain superfamily DOE58_RS19425 IPR023034 Peptidyl-prolyl isomerase SurA DOE58_RS19425 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE58_RS19425 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE58_RS19430 IPR005255 PdxA family DOE58_RS19430 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase DOE58_RS19435 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DOE58_RS19435 IPR023165 rRNA adenine dimethylase-like DOE58_RS19435 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DOE58_RS19435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS19435 IPR011530 Ribosomal RNA adenine dimethylase DOE58_RS19435 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DOE58_RS19440 IPR036767 ApaG domain superfamily DOE58_RS19440 IPR007474 ApaG domain DOE58_RS19440 IPR023065 Uncharacterised protein family ApaG DOE58_RS19445 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) DOE58_RS19445 IPR029052 Metallo-dependent phosphatase-like DOE58_RS19445 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS19450 IPR017925 Dihydrofolate reductase conserved site DOE58_RS19450 IPR012259 Dihydrofolate reductase DOE58_RS19450 IPR024072 Dihydrofolate reductase-like domain superfamily DOE58_RS19450 IPR001796 Dihydrofolate reductase domain DOE58_RS19460 IPR036291 NAD(P)-binding domain superfamily DOE58_RS19460 IPR006153 Cation/H+ exchanger DOE58_RS19460 IPR004771 K+/H+ exchanger DOE58_RS19460 IPR003148 Regulator of K+ conductance, N-terminal DOE58_RS19460 IPR038770 Sodium/solute symporter superfamily DOE58_RS19460 IPR006036 Potassium uptake protein TrkA DOE58_RS19460 IPR023941 Glutathione-regulated potassium-efflux system protein KefC DOE58_RS19465 IPR029039 Flavoprotein-like superfamily DOE58_RS19465 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF DOE58_RS19465 IPR003680 Flavodoxin-like fold DOE58_RS19480 IPR024607 Sulfatase, conserved site DOE58_RS19480 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS19480 IPR000917 Sulfatase, N-terminal DOE58_RS19500 IPR010920 LSM domain superfamily DOE58_RS19500 IPR010305 Protein of unknown function DUF903 DOE58_RS19505 IPR005828 Major facilitator, sugar transporter-like DOE58_RS19505 IPR036259 MFS transporter superfamily DOE58_RS19505 IPR020846 Major facilitator superfamily domain DOE58_RS19510 IPR012206 Ferredoxin-like, FixX DOE58_RS19515 IPR002938 FAD-binding domain DOE58_RS19515 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS19515 IPR039651 Protein FixC-like DOE58_RS19520 IPR023461 Electron transfer flavoprotein FixB subunit DOE58_RS19520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS19520 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE58_RS19520 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DOE58_RS19520 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS19520 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DOE58_RS19520 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DOE58_RS19525 IPR023463 Electron transfer flavoprotein, FixA subunit DOE58_RS19525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS19525 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DOE58_RS19525 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DOE58_RS19525 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DOE58_RS19525 IPR012255 Electron transfer flavoprotein, beta subunit DOE58_RS19535 IPR000060 BCCT transporter family DOE58_RS19535 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT DOE58_RS19535 IPR018093 BCCT transporter, conserved site DOE58_RS19540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE58_RS19540 IPR023450 Crotonobetainyl-CoA reductase CaiA DOE58_RS19540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DOE58_RS19540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DOE58_RS19540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE58_RS19540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE58_RS19540 IPR006089 Acyl-CoA dehydrogenase, conserved site DOE58_RS19540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE58_RS19545 IPR023606 CoA-transferase family III domain superfamily DOE58_RS19545 IPR003673 CoA-transferase family III DOE58_RS19545 IPR023452 L-carnitine CoA-transferase CaiB DOE58_RS19550 IPR000873 AMP-dependent synthetase/ligase DOE58_RS19550 IPR020845 AMP-binding, conserved site DOE58_RS19550 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS19550 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS19550 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC DOE58_RS19555 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS19555 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE58_RS19555 IPR001753 Enoyl-CoA hydratase/isomerase DOE58_RS19555 IPR014748 Enoyl-CoA hydratase, C-terminal DOE58_RS19555 IPR022852 Carnitinyl-CoA dehydratase DOE58_RS19560 IPR023446 Carnitine operon protein CaiE DOE58_RS19560 IPR001451 Hexapeptide repeat DOE58_RS19560 IPR011004 Trimeric LpxA-like superfamily DOE58_RS19565 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19565 IPR020357 Transcription regulator CaiF/GrlA DOE58_RS19570 IPR036914 Methylglyoxal synthase-like domain superfamily DOE58_RS19570 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain DOE58_RS19570 IPR006275 Carbamoyl-phosphate synthase, large subunit DOE58_RS19570 IPR011607 Methylglyoxal synthase-like domain DOE58_RS19570 IPR011761 ATP-grasp fold DOE58_RS19570 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily DOE58_RS19570 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DOE58_RS19570 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS19570 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain DOE58_RS19570 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain DOE58_RS19575 IPR017926 Glutamine amidotransferase DOE58_RS19575 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain DOE58_RS19575 IPR029062 Class I glutamine amidotransferase-like DOE58_RS19575 IPR006274 Carbamoyl-phosphate synthase, small subunit DOE58_RS19575 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain DOE58_RS19575 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily DOE58_RS19585 IPR036291 NAD(P)-binding domain superfamily DOE58_RS19585 IPR022663 Dihydrodipicolinate reductase, C-terminal DOE58_RS19585 IPR023940 Dihydrodipicolinate reductase DOE58_RS19585 IPR000846 Dihydrodipicolinate reductase, N-terminal DOE58_RS19585 IPR022664 Dihydrodipicolinate reductase, conserved site DOE58_RS19590 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG DOE58_RS19590 IPR002736 Triphosphoribosyl-dephospho-CoA protein DOE58_RS19595 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DOE58_RS19600 IPR037171 NagB/RpiA transferase-like DOE58_RS19600 IPR006472 Citrate lyase, alpha subunit DOE58_RS19605 IPR006475 Citrate lyase, beta subunit, bacteria DOE58_RS19605 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS19605 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DOE58_RS19605 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS19605 IPR011206 Citrate lyase beta subunit-like DOE58_RS19610 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DOE58_RS19610 IPR006495 Citrate lyase acyl carrier protein CitD DOE58_RS19615 IPR013166 Citrate lyase ligase, C-terminal DOE58_RS19615 IPR004821 Cytidyltransferase-like domain DOE58_RS19615 IPR000182 GNAT domain DOE58_RS19615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS19615 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS19615 IPR005216 Citrate lyase ligase DOE58_RS19620 IPR004679 2-hydroxycarboxylate transporter DOE58_RS19620 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes DOE58_RS19625 IPR005899 Sodium ion-translocating decarboxylase DOE58_RS19625 IPR023424 Oxaloacetate decarboxylase gamma chain, probable DOE58_RS19630 IPR000891 Pyruvate carboxyltransferase DOE58_RS19630 IPR001882 Biotin-binding site DOE58_RS19630 IPR011053 Single hybrid motif DOE58_RS19630 IPR000089 Biotin/lipoyl attachment DOE58_RS19630 IPR003379 Carboxylase, conserved domain DOE58_RS19630 IPR005776 Oxaloacetate decarboxylase, alpha subunit DOE58_RS19630 IPR013785 Aldolase-type TIM barrel DOE58_RS19635 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit DOE58_RS19640 IPR035965 PAS domain superfamily DOE58_RS19640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS19640 IPR033463 Single cache domain 3 DOE58_RS19640 IPR000014 PAS domain DOE58_RS19640 IPR029151 Periplasmic sensor-like domain superfamily DOE58_RS19640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS19640 IPR005467 Histidine kinase domain DOE58_RS19640 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS19640 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB DOE58_RS19645 IPR024187 Signal transduction response regulator, citrate/malate metabolism DOE58_RS19645 IPR011006 CheY-like superfamily DOE58_RS19645 IPR028141 Transcriptional regulator DOE58_RS19645 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS19650 IPR023186 Inosine/uridine-preferring nucleoside hydrolase DOE58_RS19650 IPR022976 Non-specific ribonucleoside hydrolase RihC DOE58_RS19650 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOE58_RS19650 IPR036452 Ribonucleoside hydrolase-like DOE58_RS19660 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DOE58_RS19665 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS19670 IPR001872 Peptidase A8, signal peptidase II DOE58_RS19675 IPR010663 Zinc finger, FPG/IleRS-type DOE58_RS19675 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE58_RS19675 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE58_RS19675 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS19675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS19675 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE58_RS19675 IPR023585 Isoleucine-tRNA ligase, type 1 DOE58_RS19675 IPR002301 Isoleucine-tRNA ligase DOE58_RS19675 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DOE58_RS19675 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS19680 IPR023468 Riboflavin kinase DOE58_RS19680 IPR015864 FAD synthetase DOE58_RS19680 IPR023465 Riboflavin kinase domain superfamily DOE58_RS19680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS19680 IPR002606 Riboflavin kinase, bacterial DOE58_RS19680 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DOE58_RS19685 IPR020105 Uncharacterised protein family YaaY DOE58_RS19690 IPR036510 Ribosomal protein S20 superfamily DOE58_RS19690 IPR002583 Ribosomal protein S20 DOE58_RS19695 IPR039672 Lactose permease-like DOE58_RS19695 IPR001927 Sodium:galactoside symporter DOE58_RS19695 IPR036259 MFS transporter superfamily DOE58_RS19695 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS19695 IPR020846 Major facilitator superfamily domain DOE58_RS19700 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS19700 IPR017853 Glycoside hydrolase superfamily DOE58_RS19700 IPR000322 Glycoside hydrolase family 31 DOE58_RS19705 IPR005119 LysR, substrate-binding DOE58_RS19705 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19705 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19705 IPR000847 Transcription regulator HTH, LysR DOE58_RS19710 IPR004670 Na+/H+ antiporter NhaA DOE58_RS19710 IPR023171 Na/H antiporter domain superfamily DOE58_RS19725 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE58_RS19725 IPR013785 Aldolase-type TIM barrel DOE58_RS19725 IPR023885 4Fe4S-binding SPASM domain DOE58_RS19725 IPR007197 Radical SAM DOE58_RS19730 IPR000917 Sulfatase, N-terminal DOE58_RS19730 IPR024607 Sulfatase, conserved site DOE58_RS19730 IPR032158 Domain of unknown function DUF4994 DOE58_RS19730 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS19740 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE58_RS19740 IPR008334 5'-Nucleotidase, C-terminal DOE58_RS19740 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS19740 IPR029052 Metallo-dependent phosphatase-like DOE58_RS19740 IPR006146 5'-Nucleotidase, conserved site DOE58_RS19740 IPR006179 5'-Nucleotidase/apyrase DOE58_RS19755 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19755 IPR005119 LysR, substrate-binding DOE58_RS19755 IPR000847 Transcription regulator HTH, LysR DOE58_RS19755 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19775 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS19775 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS19775 IPR018046 Pili assembly chaperone, conserved site DOE58_RS19775 IPR013783 Immunoglobulin-like fold DOE58_RS19775 IPR008962 PapD-like superfamily DOE58_RS19775 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS19775 IPR001829 Pili assembly chaperone, bacterial DOE58_RS19780 IPR039458 FimA-like DOE58_RS19780 IPR008966 Adhesion domain superfamily DOE58_RS19780 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS19785 IPR000259 Fimbrial-type adhesion domain DOE58_RS19785 IPR008966 Adhesion domain superfamily DOE58_RS19785 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS19790 IPR000259 Fimbrial-type adhesion domain DOE58_RS19790 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS19790 IPR008966 Adhesion domain superfamily DOE58_RS19795 IPR025885 PapC, N-terminal domain DOE58_RS19795 IPR025949 PapC-like, C-terminal domain DOE58_RS19795 IPR037224 PapC, N-terminal domain superfamily DOE58_RS19795 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS19795 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS19795 IPR000015 Outer membrane usher protein DOE58_RS19800 IPR018046 Pili assembly chaperone, conserved site DOE58_RS19800 IPR013783 Immunoglobulin-like fold DOE58_RS19800 IPR008962 PapD-like superfamily DOE58_RS19800 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS19800 IPR001829 Pili assembly chaperone, bacterial DOE58_RS19800 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS19800 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS19805 IPR000259 Fimbrial-type adhesion domain DOE58_RS19805 IPR008966 Adhesion domain superfamily DOE58_RS19805 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS19820 IPR017853 Glycoside hydrolase superfamily DOE58_RS19820 IPR001223 Glycoside hydrolase family 18, catalytic domain DOE58_RS19820 IPR029070 Chitinase insertion domain superfamily DOE58_RS19820 IPR011583 Chitinase II DOE58_RS19840 IPR037416 Nodulation protein D, PBP2 DOE58_RS19840 IPR005119 LysR, substrate-binding DOE58_RS19840 IPR000847 Transcription regulator HTH, LysR DOE58_RS19840 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS19840 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19845 IPR012724 Chaperone DnaJ DOE58_RS19845 IPR001623 DnaJ domain DOE58_RS19845 IPR018253 DnaJ domain, conserved site DOE58_RS19845 IPR008971 HSP40/DnaJ peptide-binding DOE58_RS19845 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DOE58_RS19845 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DOE58_RS19845 IPR036869 Chaperone J-domain superfamily DOE58_RS19845 IPR002939 Chaperone DnaJ, C-terminal DOE58_RS19850 IPR018181 Heat shock protein 70, conserved site DOE58_RS19850 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DOE58_RS19850 IPR013126 Heat shock protein 70 family DOE58_RS19850 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DOE58_RS19850 IPR012725 Chaperone DnaK DOE58_RS19855 IPR020240 Uncharacterised protein family UPF0412, YaaI DOE58_RS19860 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 DOE58_RS19860 IPR025217 Domain of unknown function DUF3944 DOE58_RS19865 IPR000791 Acetate transporter GPR1/FUN34/SatP family DOE58_RS19870 IPR001453 MoaB/Mog domain DOE58_RS19870 IPR008284 Molybdenum cofactor biosynthesis, conserved site DOE58_RS19870 IPR036425 MoaB/Mog-like domain superfamily DOE58_RS19875 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE58_RS19875 IPR013785 Aldolase-type TIM barrel DOE58_RS19875 IPR004730 Transaldolase type 1 DOE58_RS19875 IPR018225 Transaldolase, active site DOE58_RS19880 IPR001463 Sodium:alanine symporter DOE58_RS19885 IPR005583 Peroxide stress protein YaaA DOE58_RS19890 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS19890 IPR029144 Threonine synthase, N-terminal DOE58_RS19890 IPR037158 Threonine synthase, N-terminal domain superfamily DOE58_RS19890 IPR004450 Threonine synthase-like DOE58_RS19890 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS19890 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE58_RS19895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS19895 IPR006204 GHMP kinase N-terminal domain DOE58_RS19895 IPR036554 GHMP kinase, C-terminal domain superfamily DOE58_RS19895 IPR000870 Homoserine kinase DOE58_RS19895 IPR013750 GHMP kinase, C-terminal domain DOE58_RS19895 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS19895 IPR006203 GHMP kinase, ATP-binding, conserved site DOE58_RS19900 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOE58_RS19900 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS19900 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOE58_RS19900 IPR001341 Aspartate kinase DOE58_RS19900 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOE58_RS19900 IPR027795 CASTOR, ACT domain DOE58_RS19900 IPR001342 Homoserine dehydrogenase, catalytic DOE58_RS19900 IPR002912 ACT domain DOE58_RS19900 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS19900 IPR019811 Homoserine dehydrogenase, conserved site DOE58_RS19900 IPR018042 Aspartate kinase, conserved site DOE58_RS19900 IPR036291 NAD(P)-binding domain superfamily DOE58_RS19905 IPR011720 Thr operon leader peptide DOE58_RS19910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS19910 IPR004384 RNA methyltransferase TrmJ/LasT DOE58_RS19910 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS19910 IPR029028 Alpha/beta knot methyltransferases DOE58_RS19920 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19920 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS19920 IPR011006 CheY-like superfamily DOE58_RS19920 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS19920 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS19920 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS19930 IPR018490 Cyclic nucleotide-binding-like DOE58_RS19930 IPR000595 Cyclic nucleotide-binding domain DOE58_RS19930 IPR041687 IprA, winged helix-turn-helix domain DOE58_RS19930 IPR034719 Inhibitor of hydrogen peroxide resistance DOE58_RS19940 IPR016148 Pili assembly chaperone, C-terminal DOE58_RS19940 IPR013783 Immunoglobulin-like fold DOE58_RS19940 IPR008962 PapD-like superfamily DOE58_RS19940 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS19940 IPR018046 Pili assembly chaperone, conserved site DOE58_RS19940 IPR001829 Pili assembly chaperone, bacterial DOE58_RS19940 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS19945 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS19945 IPR000015 Outer membrane usher protein DOE58_RS19945 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS19945 IPR025949 PapC-like, C-terminal domain DOE58_RS19945 IPR025885 PapC, N-terminal domain DOE58_RS19945 IPR037224 PapC, N-terminal domain superfamily DOE58_RS19960 IPR010364 Uncharacterised protein family, inner membrane CreD DOE58_RS19965 IPR005467 Histidine kinase domain DOE58_RS19965 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS19965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS19965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS19965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS19965 IPR003660 HAMP domain DOE58_RS19965 IPR029151 Periplasmic sensor-like domain superfamily DOE58_RS19965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS19970 IPR011006 CheY-like superfamily DOE58_RS19970 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS19970 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS19970 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS19970 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS19970 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS19975 IPR010292 Uncharacterised protein family CreA DOE58_RS19980 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS19980 IPR010499 Bacterial transcription activator, effector binding DOE58_RS19980 IPR029442 GyrI-like small molecule binding domain DOE58_RS19980 IPR011256 Regulatory factor, effector binding domain superfamily DOE58_RS19980 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS19980 IPR018062 HTH domain AraC-type, conserved site DOE58_RS19980 IPR009057 Homeobox-like domain superfamily DOE58_RS19985 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS19985 IPR029033 Histidine phosphatase superfamily DOE58_RS19985 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DOE58_RS19985 IPR023086 Phosphoglycerate mutase, GpmB, probable DOE58_RS19990 IPR029001 Inosine triphosphate pyrophosphatase-like DOE58_RS19990 IPR002786 Inosine/xanthosine triphosphatase DOE58_RS19990 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 DOE58_RS20000 IPR000831 Trp repressor DOE58_RS20000 IPR013335 Trp repressor, bacterial DOE58_RS20000 IPR038116 TrpR-like superfamily DOE58_RS20000 IPR010921 Trp repressor/replication initiator DOE58_RS20005 IPR000189 Prokaryotic transglycosylase, active site DOE58_RS20005 IPR008258 Transglycosylase SLT domain 1 DOE58_RS20005 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily DOE58_RS20005 IPR012289 Lytic transglycosylase, superhelical linker DOE58_RS20005 IPR023346 Lysozyme-like domain superfamily DOE58_RS20005 IPR008939 Lytic transglycosylase, superhelical U-shaped DOE58_RS20015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20015 IPR003439 ABC transporter-like DOE58_RS20015 IPR032781 ABC-transporter extension domain DOE58_RS20015 IPR003593 AAA+ ATPase domain DOE58_RS20015 IPR017871 ABC transporter, conserved site DOE58_RS20015 IPR022374 Energy-dependent translational throttle protein EttA DOE58_RS20020 IPR006417 Nicotinamide-nucleotide adenylyltransferase DOE58_RS20020 IPR038727 NadR/Ttd14, AAA domain DOE58_RS20020 IPR016429 NAD biosynthesis/regulator protein NadR DOE58_RS20020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS20020 IPR004821 Cytidyltransferase-like domain DOE58_RS20020 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS20020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20020 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain DOE58_RS20020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS20025 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS20025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20025 IPR041166 LapB, rubredoxin metal binding domain DOE58_RS20025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS20025 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DOE58_RS20025 IPR003593 AAA+ ATPase domain DOE58_RS20025 IPR004504 DNA repair protein RadA DOE58_RS20030 IPR023214 HAD superfamily DOE58_RS20030 IPR036412 HAD-like superfamily DOE58_RS20030 IPR023190 Phosphoserine phosphatase, domain 2 DOE58_RS20030 IPR041449 Phosphoserine phosphatase, N-terminal DOE58_RS20040 IPR019305 Uncharacterised protein family Smp DOE58_RS20045 IPR004562 Lipoyltransferase/lipoate-protein ligase DOE58_RS20045 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE58_RS20045 IPR023741 Lipoate-protein ligase A DOE58_RS20045 IPR019491 Lipoate protein ligase, C-terminal DOE58_RS20050 IPR002686 Transposase IS200-like DOE58_RS20050 IPR036515 Transposase IS200-like superfamily DOE58_RS20055 IPR004402 Purine nucleoside phosphorylase DeoD-type DOE58_RS20055 IPR035994 Nucleoside phosphorylase superfamily DOE58_RS20055 IPR018016 Nucleoside phosphorylase, conserved site DOE58_RS20055 IPR000845 Nucleoside phosphorylase domain DOE58_RS20060 IPR010045 Phosphopentomutase DOE58_RS20060 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS20060 IPR006124 Metalloenzyme DOE58_RS20060 IPR024052 Phosphopentomutase DeoB cap domain superfamily DOE58_RS20065 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal DOE58_RS20065 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic DOE58_RS20065 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily DOE58_RS20065 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase DOE58_RS20065 IPR017459 Glycosyl transferase family 3, N-terminal domain DOE58_RS20065 IPR013465 Thymidine phosphorylase DOE58_RS20065 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DOE58_RS20065 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DOE58_RS20065 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site DOE58_RS20065 IPR000312 Glycosyl transferase, family 3 DOE58_RS20070 IPR011343 Deoxyribose-phosphate aldolase DOE58_RS20070 IPR023649 Deoxyribose-phosphate aldolase type II DOE58_RS20070 IPR013785 Aldolase-type TIM barrel DOE58_RS20070 IPR002915 DeoC/FbaB/ lacD aldolase DOE58_RS20075 IPR016905 Glycyl radical enzyme, HI0521, predicted DOE58_RS20080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS20080 IPR034457 Organic radical-activating enzymes DOE58_RS20080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS20080 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW DOE58_RS20080 IPR013785 Aldolase-type TIM barrel DOE58_RS20080 IPR001989 Radical-activating enzyme, conserved site DOE58_RS20080 IPR007197 Radical SAM DOE58_RS20080 IPR012839 Organic radical enzyme activase DOE58_RS20085 IPR001130 TatD family DOE58_RS20085 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE58_RS20085 IPR032466 Metal-dependent hydrolase DOE58_RS20090 IPR037483 YjjU-like DOE58_RS20090 IPR002641 Patatin-like phospholipase domain DOE58_RS20090 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE58_RS20095 IPR009760 Protein of unknown function DUF1328 DOE58_RS20100 IPR014004 Transport-associated and nodulation domain, bacteria DOE58_RS20100 IPR007055 BON domain DOE58_RS20105 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DOE58_RS20105 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS20105 IPR004548 Peptide chain release factor 3 DOE58_RS20105 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS20105 IPR035647 EF-G domain III/V-like DOE58_RS20105 IPR000795 Transcription factor, GTP-binding domain DOE58_RS20105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20105 IPR031157 Tr-type G domain, conserved site DOE58_RS20105 IPR041732 Peptide chain release factor 3, GTP-binding domain DOE58_RS20105 IPR032090 Peptide chain release factor 3, C-terminal DOE58_RS20105 IPR005225 Small GTP-binding protein domain DOE58_RS20110 IPR006439 HAD hydrolase, subfamily IA DOE58_RS20110 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS20110 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB DOE58_RS20110 IPR036412 HAD-like superfamily DOE58_RS20110 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS20110 IPR023214 HAD superfamily DOE58_RS20115 IPR006464 N-acetyltransferase RimI/Ard1 DOE58_RS20115 IPR000182 GNAT domain DOE58_RS20115 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS20120 IPR036654 DNA polymerase III, psi subunit superfamily DOE58_RS20120 IPR018382 DNA polymerase III, psi subunit, subgroup DOE58_RS20120 IPR004615 DNA polymerase III, psi subunit DOE58_RS20125 IPR007848 Methyltransferase small domain DOE58_RS20125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS20125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS20125 IPR013675 Methyltransferase small, N-terminal DOE58_RS20125 IPR023543 rRNA small subunit methyltransferase C DOE58_RS20145 IPR009885 Protein of unknown function DUF1435 DOE58_RS20150 IPR007894 MASE2 DOE58_RS20150 IPR029787 Nucleotide cyclase DOE58_RS20150 IPR000160 GGDEF domain DOE58_RS20155 IPR024726 Ferric iron reductase, C-terminal DOE58_RS20155 IPR008090 Ferric iron reductase DOE58_RS20155 IPR022770 Ferric iron reductase FhuF domain DOE58_RS20160 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DOE58_RS20160 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DOE58_RS20165 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS20165 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20165 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS20170 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS20170 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS20175 IPR010619 Putative threonine/serine exporter DOE58_RS20180 IPR024528 Threonine/Serine exporter, ThrE DOE58_RS20180 IPR020914 Uncharacterised protein family UPF0442 DOE58_RS20185 IPR040480 DnaT, DNA-binding domain DOE58_RS20185 IPR020917 Primosomal protein 1 DOE58_RS20190 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20190 IPR002611 IstB-like ATP-binding protein DOE58_RS20190 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein DOE58_RS20190 IPR003593 AAA+ ATPase domain DOE58_RS20195 IPR019637 Protein of unknown function DUF2501 DOE58_RS20200 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS20200 IPR020881 Phosphoglycerol transferase I DOE58_RS20200 IPR000917 Sulfatase, N-terminal DOE58_RS20205 IPR004090 Chemotaxis methyl-accepting receptor DOE58_RS20205 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE58_RS20205 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DOE58_RS20205 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DOE58_RS20205 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DOE58_RS20205 IPR003660 HAMP domain DOE58_RS20210 IPR003706 CstA, N-terminal domain DOE58_RS20210 IPR025299 CstA, C-terminal domain DOE58_RS20215 IPR007423 Selenoprotein, putative DOE58_RS20220 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE58_RS20220 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20220 IPR036627 CobW-like, C-terminal domain superfamily DOE58_RS20220 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE58_RS20225 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS20225 IPR018062 HTH domain AraC-type, conserved site DOE58_RS20225 IPR009057 Homeobox-like domain superfamily DOE58_RS20225 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS20225 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS20225 IPR037923 Transcription regulator HTH-like DOE58_RS20250 IPR016161 Aldehyde/histidinol dehydrogenase DOE58_RS20250 IPR016163 Aldehyde dehydrogenase, C-terminal DOE58_RS20250 IPR016160 Aldehyde dehydrogenase, cysteine active site DOE58_RS20250 IPR016162 Aldehyde dehydrogenase, N-terminal DOE58_RS20250 IPR015590 Aldehyde dehydrogenase domain DOE58_RS20255 IPR006842 Transposase (putative), YhgA-like DOE58_RS20255 IPR010106 Recombination-promoting nuclease RpnA DOE58_RS20260 IPR036259 MFS transporter superfamily DOE58_RS20260 IPR020846 Major facilitator superfamily domain DOE58_RS20260 IPR011701 Major facilitator superfamily DOE58_RS20260 IPR005829 Sugar transporter, conserved site DOE58_RS20265 IPR007383 Protein of unknown function DUF445 DOE58_RS20270 IPR010645 Uncharacterised MFS-type transporter YbfB DOE58_RS20270 IPR036259 MFS transporter superfamily DOE58_RS20275 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE58_RS20280 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DOE58_RS20285 IPR033826 Isoaspartyl-dipeptidase DOE58_RS20285 IPR006680 Amidohydrolase-related DOE58_RS20285 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS20285 IPR032466 Metal-dependent hydrolase DOE58_RS20285 IPR010229 Peptidase M38, beta-aspartyl dipeptidase DOE58_RS20290 IPR005119 LysR, substrate-binding DOE58_RS20290 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS20290 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20290 IPR000847 Transcription regulator HTH, LysR DOE58_RS20295 IPR015942 Asp/Glu/hydantoin racemase DOE58_RS20295 IPR033134 Asp/Glu racemase, active site 2 DOE58_RS20295 IPR004380 Aspartate racemase DOE58_RS20295 IPR001920 Asp/Glu racemase DOE58_RS20310 IPR002306 Tryptophan-tRNA ligase DOE58_RS20310 IPR024109 Tryptophan-tRNA ligase, bacterial-type DOE58_RS20310 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS20310 IPR002305 Aminoacyl-tRNA synthetase, class Ic DOE58_RS20310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS20315 IPR000524 Transcription regulator HTH, GntR DOE58_RS20315 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS20315 IPR011711 GntR, C-terminal DOE58_RS20315 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS20315 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20325 IPR029058 Alpha/Beta hydrolase fold DOE58_RS20325 IPR002925 Dienelactone hydrolase DOE58_RS20330 IPR003691 Putative fluoride ion transporter CrcB DOE58_RS20330 IPR005180 Domain of unknown function DUF302 DOE58_RS20330 IPR035923 TT1751-like domain superfamily DOE58_RS20355 IPR018654 Putative toxin of bacterial toxin-antitoxin pair DOE58_RS20360 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type DOE58_RS20360 IPR025714 Methyltransferase domain DOE58_RS20360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS20370 IPR002876 Transcriptional regulator TACO1-like DOE58_RS20370 IPR029072 YebC-like DOE58_RS20370 IPR017856 Integrase-like, N-terminal DOE58_RS20370 IPR026564 Transcriptional regulator TACO1-like, domain 3 DOE58_RS20370 IPR026562 Probable transcriptional regulatory protein YeeN DOE58_RS20450 IPR009610 CbtA toxin of type IV toxin-antitoxin system DOE58_RS20455 IPR038025 Antitoxin CbeA superfamily DOE58_RS20455 IPR009320 Antitoxin CbeA DOE58_RS20460 IPR037518 MPN domain DOE58_RS20460 IPR025657 RadC-like JAB domain DOE58_RS20460 IPR001405 Uncharacterised protein family UPF0758 DOE58_RS20460 IPR020891 Uncharacterised protein family UPF0758, conserved site DOE58_RS20485 IPR001034 DeoR-type HTH domain DOE58_RS20485 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS20485 IPR026881 WYL domain DOE58_RS20530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20530 IPR013670 EcoEI R protein C-terminal domain DOE58_RS20530 IPR006935 Helicase/UvrB, N-terminal DOE58_RS20530 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS20530 IPR001650 Helicase, C-terminal DOE58_RS20530 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal DOE58_RS20535 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS20535 IPR003356 DNA methylase, adenine-specific DOE58_RS20535 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DOE58_RS20535 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DOE58_RS20535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS20565 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS20565 IPR036291 NAD(P)-binding domain superfamily DOE58_RS20565 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DOE58_RS20565 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE58_RS20565 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS20565 IPR011032 GroES-like superfamily DOE58_RS20565 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS20570 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DOE58_RS20570 IPR031322 Shikimate kinase/gluconokinase DOE58_RS20570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS20575 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS20575 IPR036291 NAD(P)-binding domain superfamily DOE58_RS20575 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS20575 IPR011032 GroES-like superfamily DOE58_RS20580 IPR020904 Short-chain dehydrogenase/reductase, conserved site DOE58_RS20580 IPR002347 Short-chain dehydrogenase/reductase SDR DOE58_RS20580 IPR036291 NAD(P)-binding domain superfamily DOE58_RS20585 IPR003474 Gluconate transporter DOE58_RS20595 IPR030923 LPS export ABC transporter permease LptG DOE58_RS20595 IPR005495 Permease LptG/LptF-related DOE58_RS20600 IPR005495 Permease LptG/LptF-related DOE58_RS20600 IPR030922 LPS export ABC transporter permease LptF DOE58_RS20615 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DOE58_RS20615 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DOE58_RS20615 IPR023042 Peptidase M17, leucine aminopeptidase DOE58_RS20615 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DOE58_RS20620 IPR007459 DNA polymerase III chi subunit, HolC DOE58_RS20620 IPR036768 DNA polymerase III subunit chi superfamily DOE58_RS20625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DOE58_RS20625 IPR033705 Valyl tRNA synthetase, anticodon-binding domain DOE58_RS20625 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DOE58_RS20625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE58_RS20625 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DOE58_RS20625 IPR002303 Valine-tRNA ligase DOE58_RS20625 IPR002300 Aminoacyl-tRNA synthetase, class Ia DOE58_RS20625 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DOE58_RS20625 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DOE58_RS20625 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DOE58_RS20625 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DOE58_RS20630 IPR010295 Protein of unknown function DUF898 DOE58_RS20635 IPR000182 GNAT domain DOE58_RS20635 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS20640 IPR022061 Protein of unknown function DUF3617 DOE58_RS20645 IPR009078 Ferritin-like superfamily DOE58_RS20645 IPR012347 Ferritin-like DOE58_RS20645 IPR010386 tRNA-hydroxylase MiaE DOE58_RS20650 IPR016716 Regulator of ribonuclease activity B DOE58_RS20650 IPR036701 RraB-like superfamily DOE58_RS20650 IPR009671 Regulator of ribonuclease activity B domain DOE58_RS20655 IPR006130 Aspartate/ornithine carbamoyltransferase DOE58_RS20655 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE58_RS20655 IPR024904 Ornithine carbamoyltransferase DOE58_RS20655 IPR002292 Ornithine/putrescine carbamoyltransferase DOE58_RS20655 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE58_RS20655 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE58_RS20660 IPR037012 YhcH/YjgK/YiaL superfamily DOE58_RS20660 IPR004375 YhcH/YjgK/YiaL family DOE58_RS20670 IPR003876 Arginine deiminase DOE58_RS20675 IPR003964 Carbamate kinase DOE58_RS20675 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS20675 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS20680 IPR006130 Aspartate/ornithine carbamoyltransferase DOE58_RS20680 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE58_RS20680 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE58_RS20680 IPR024904 Ornithine carbamoyltransferase DOE58_RS20680 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE58_RS20680 IPR002292 Ornithine/putrescine carbamoyltransferase DOE58_RS20685 IPR018385 C4-dicarboxylate anaerobic carrier-like DOE58_RS20690 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20690 IPR036251 Arginine repressor, C-terminal domain superfamily DOE58_RS20690 IPR020900 Arginine repressor, DNA-binding domain DOE58_RS20690 IPR020899 Arginine repressor, C-terminal DOE58_RS20690 IPR001669 Arginine repressor DOE58_RS20690 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS20700 IPR012602 PyrBI operon leader peptide DOE58_RS20705 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DOE58_RS20705 IPR006130 Aspartate/ornithine carbamoyltransferase DOE58_RS20705 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DOE58_RS20705 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DOE58_RS20705 IPR002082 Aspartate carbamoyltransferase DOE58_RS20710 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DOE58_RS20710 IPR002801 Aspartate transcarbamylase regulatory subunit DOE58_RS20710 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily DOE58_RS20710 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DOE58_RS20710 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DOE58_RS20715 IPR006175 YjgF/YER057c/UK114 family DOE58_RS20715 IPR035959 RutC-like superfamily DOE58_RS20715 IPR019897 RidA, conserved site DOE58_RS20715 IPR006056 RidA family DOE58_RS20720 IPR004014 Cation-transporting P-type ATPase, N-terminal DOE58_RS20720 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS20720 IPR006415 P-type ATPase, subfamily IIIB DOE58_RS20720 IPR006068 Cation-transporting P-type ATPase, C-terminal DOE58_RS20720 IPR023214 HAD superfamily DOE58_RS20720 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS20720 IPR008250 P-type ATPase, A domain superfamily DOE58_RS20720 IPR036412 HAD-like superfamily DOE58_RS20720 IPR018303 P-type ATPase, phosphorylation site DOE58_RS20720 IPR001757 P-type ATPase DOE58_RS20725 IPR031434 MgtA leader peptide DOE58_RS20730 IPR000843 LacI-type HTH domain DOE58_RS20730 IPR012771 Trehalose operon repressor DOE58_RS20730 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS20730 IPR028082 Periplasmic binding protein-like I DOE58_RS20735 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component DOE58_RS20735 IPR036878 Glucose permease domain IIB DOE58_RS20735 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DOE58_RS20735 IPR011296 Phosphotransferase system, trehalose-specific IIBC component DOE58_RS20735 IPR003352 Phosphotransferase system, EIIC DOE58_RS20735 IPR001996 Phosphotransferase system, IIB component, type 1 DOE58_RS20735 IPR013013 Phosphotransferase system, EIIC component, type 1 DOE58_RS20740 IPR012769 Trehalose-6-phosphate hydrolase DOE58_RS20740 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DOE58_RS20740 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS20740 IPR017853 Glycoside hydrolase superfamily DOE58_RS20740 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DOE58_RS20745 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic DOE58_RS20745 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS20745 IPR001150 Glycine radical domain DOE58_RS20745 IPR005144 ATP-cone domain DOE58_RS20750 IPR034457 Organic radical-activating enzymes DOE58_RS20750 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic DOE58_RS20750 IPR001989 Radical-activating enzyme, conserved site DOE58_RS20750 IPR013785 Aldolase-type TIM barrel DOE58_RS20755 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DOE58_RS20755 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DOE58_RS20760 IPR007337 RelB antitoxin/Antitoxin DinJ DOE58_RS20760 IPR013321 Arc-type ribbon-helix-helix DOE58_RS20765 IPR013196 Helix-turn-helix, type 11 DOE58_RS20765 IPR007737 Mga helix-turn-helix domain DOE58_RS20765 IPR036634 PRD domain superfamily DOE58_RS20765 IPR016152 Phosphotransferase/anion transporter DOE58_RS20765 IPR011608 PRD domain DOE58_RS20765 IPR036095 PTS system IIB component-like superfamily DOE58_RS20765 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS20765 IPR002178 PTS EIIA type-2 domain DOE58_RS20765 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20765 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS20770 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase DOE58_RS20770 IPR013785 Aldolase-type TIM barrel DOE58_RS20775 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like DOE58_RS20775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS20775 IPR018319 L-seryl-tRNA selenium transferase-like DOE58_RS20775 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS20780 IPR006680 Amidohydrolase-related DOE58_RS20780 IPR020043 Deacetylase Atu3266-like DOE58_RS20780 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS20780 IPR032466 Metal-dependent hydrolase DOE58_RS20810 IPR010980 Cytochrome c/b562 DOE58_RS20810 IPR009155 Cytochrome b562 DOE58_RS20815 IPR035068 Metalloprotease TldD/PmbA, N-terminal DOE58_RS20815 IPR002510 Metalloprotease TldD/PmbA DOE58_RS20815 IPR036059 Metalloprotease TldD/PmbA superfamily DOE58_RS20820 IPR006839 Ribosome-associated, YjgA DOE58_RS20820 IPR023153 PSPTO4464-like domain superfamily DOE58_RS20825 IPR004101 Mur ligase, C-terminal DOE58_RS20825 IPR005757 Murein peptide ligase DOE58_RS20825 IPR000713 Mur ligase, N-terminal catalytic domain DOE58_RS20825 IPR036565 Mur-like, catalytic domain superfamily DOE58_RS20825 IPR036615 Mur ligase, C-terminal domain superfamily DOE58_RS20825 IPR013221 Mur ligase, central DOE58_RS20830 IPR028343 Fructose-1,6-bisphosphatase DOE58_RS20830 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal DOE58_RS20830 IPR020548 Fructose-1,6-bisphosphatase, active site DOE58_RS20830 IPR000146 Fructose-1,6-bisphosphatase class 1 DOE58_RS20835 IPR008162 Inorganic pyrophosphatase DOE58_RS20835 IPR036649 Inorganic pyrophosphatase superfamily DOE58_RS20840 IPR006680 Amidohydrolase-related DOE58_RS20840 IPR020043 Deacetylase Atu3266-like DOE58_RS20840 IPR011059 Metal-dependent hydrolase, composite domain superfamily DOE58_RS20840 IPR032466 Metal-dependent hydrolase DOE58_RS20845 IPR036259 MFS transporter superfamily DOE58_RS20845 IPR020846 Major facilitator superfamily domain DOE58_RS20845 IPR000849 Sugar phosphate transporter DOE58_RS20845 IPR011701 Major facilitator superfamily DOE58_RS20850 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DOE58_RS20850 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DOE58_RS20850 IPR039126 Gamma-glutamylaminecyclotransferase DOE58_RS20850 IPR013024 Gamma-glutamyl cyclotransferase-like DOE58_RS20855 IPR007452 Translocation and assembly module TamB DOE58_RS20860 IPR000184 Bacterial surface antigen (D15) DOE58_RS20860 IPR034746 POTRA domain DOE58_RS20860 IPR039910 Surface antigen D15-like DOE58_RS20860 IPR010827 POTRA domain, BamA/TamA-like DOE58_RS20860 IPR035243 TamA, POTRA domain 1 DOE58_RS20865 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DOE58_RS20865 IPR002569 Peptide methionine sulphoxide reductase MsrA DOE58_RS20870 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS20870 IPR000644 CBS domain DOE58_RS20870 IPR002550 CNNM, transmembrane domain DOE58_RS20870 IPR005170 Transporter-associated domain DOE58_RS20870 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS20875 IPR009491 Protein of unknown function DUF1107 DOE58_RS20885 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DOE58_RS20890 IPR000760 Inositol monophosphatase-like DOE58_RS20890 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ DOE58_RS20890 IPR020583 Inositol monophosphatase, metal-binding site DOE58_RS20890 IPR020550 Inositol monophosphatase, conserved site DOE58_RS20900 IPR041827 CpdB, N-terminal metallophosphatase domain DOE58_RS20900 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase DOE58_RS20900 IPR008334 5'-Nucleotidase, C-terminal DOE58_RS20900 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE58_RS20900 IPR006179 5'-Nucleotidase/apyrase DOE58_RS20900 IPR006146 5'-Nucleotidase, conserved site DOE58_RS20900 IPR029052 Metallo-dependent phosphatase-like DOE58_RS20900 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS20905 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS20905 IPR002577 Helix-turn-helix, HxlR type DOE58_RS20905 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS20910 IPR036291 NAD(P)-binding domain superfamily DOE58_RS20910 IPR008030 NmrA-like domain DOE58_RS20915 IPR000620 EamA domain DOE58_RS20920 IPR012312 Haemerythrin-like DOE58_RS20920 IPR019903 Repair of iron centres family DOE58_RS20920 IPR023742 Iron-sulfur cluster repair protein YftE DOE58_RS20925 IPR004840 Amino acid permease, conserved site DOE58_RS20925 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS20930 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DOE58_RS20930 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE58_RS20930 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DOE58_RS20940 IPR013731 Opacity-associated protein A, N-terminal DOE58_RS20940 IPR007340 Opacity-associated protein A DOE58_RS20950 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DOE58_RS20950 IPR020070 Ribosomal protein L9, N-terminal DOE58_RS20950 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DOE58_RS20950 IPR020069 Ribosomal protein L9, C-terminal DOE58_RS20950 IPR020594 Ribosomal protein L9, bacteria/chloroplast DOE58_RS20950 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DOE58_RS20950 IPR000244 Ribosomal protein L9 DOE58_RS20955 IPR001648 Ribosomal protein S18 DOE58_RS20955 IPR036870 Ribosomal protein S18 superfamily DOE58_RS20955 IPR018275 Ribosomal protein S18, conserved site DOE58_RS20960 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS20960 IPR000424 Primosome PriB/single-strand DNA-binding DOE58_RS20960 IPR023646 Primosomal replication protein PriB DOE58_RS20965 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DOE58_RS20965 IPR035980 Ribosomal protein S6 superfamily DOE58_RS20965 IPR020814 Ribosomal protein S6, plastid/chloroplast DOE58_RS20965 IPR020815 Ribosomal protein S6, conserved site DOE58_RS20965 IPR000529 Ribosomal protein S6 DOE58_RS20970 IPR010854 Domain of unknown function DUF1471 DOE58_RS20970 IPR025543 Dodecin-like DOE58_RS20970 IPR036275 YdgH-like superfamily DOE58_RS20975 IPR009898 Protein of unknown function DUF1440 DOE58_RS20980 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS20980 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS20980 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF DOE58_RS20985 IPR013022 Xylose isomerase-like, TIM barrel domain DOE58_RS20985 IPR004560 L-ribulose-5-phosphate 3-epimerase DOE58_RS20985 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae DOE58_RS20985 IPR036237 Xylose isomerase-like superfamily DOE58_RS20990 IPR001754 Orotidine 5'-phosphate decarboxylase domain DOE58_RS20990 IPR041710 HPS/KGPDC domain DOE58_RS20990 IPR013785 Aldolase-type TIM barrel DOE58_RS20990 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD DOE58_RS20990 IPR011060 Ribulose-phosphate binding barrel DOE58_RS20995 IPR002178 PTS EIIA type-2 domain DOE58_RS20995 IPR016152 Phosphotransferase/anion transporter DOE58_RS21000 IPR036095 PTS system IIB component-like superfamily DOE58_RS21000 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS21000 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS21005 IPR004703 Phosphotransferase system, sugar-specific permease component DOE58_RS21010 IPR023951 L-ascorbate-6-phosphate lactonase UlaG DOE58_RS21010 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE58_RS21015 IPR001034 DeoR-type HTH domain DOE58_RS21015 IPR037171 NagB/RpiA transferase-like DOE58_RS21015 IPR014036 DeoR C-terminal sensor domain DOE58_RS21015 IPR023711 Transcription regulator HTH, UlaR DOE58_RS21015 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21015 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS21020 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DOE58_RS21020 IPR029058 Alpha/Beta hydrolase fold DOE58_RS21025 IPR010854 Domain of unknown function DUF1471 DOE58_RS21025 IPR025543 Dodecin-like DOE58_RS21025 IPR036275 YdgH-like superfamily DOE58_RS21030 IPR036275 YdgH-like superfamily DOE58_RS21030 IPR010854 Domain of unknown function DUF1471 DOE58_RS21030 IPR025543 Dodecin-like DOE58_RS21035 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DOE58_RS21035 IPR034184 Putative acyl-CoA dehydrogenase AidB DOE58_RS21035 IPR006089 Acyl-CoA dehydrogenase, conserved site DOE58_RS21035 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DOE58_RS21035 IPR041504 Adaptive response protein AidB, N-terminal DOE58_RS21035 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DOE58_RS21035 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DOE58_RS21040 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE58_RS21040 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS21045 IPR009576 Biofilm formation YgiB DOE58_RS21050 IPR007140 Protein of unknown function DUF350 DOE58_RS21055 IPR019621 Protein of unknown function DUF2491 DOE58_RS21060 IPR007157 PspA/IM30 DOE58_RS21065 IPR019231 Protein of unknown function DUF2170 DOE58_RS21070 IPR001537 tRNA/rRNA methyltransferase, SpoU type DOE58_RS21070 IPR004441 RNA methyltransferase TrmH family DOE58_RS21070 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE58_RS21070 IPR029028 Alpha/beta knot methyltransferases DOE58_RS21070 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DOE58_RS21070 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DOE58_RS21070 IPR029064 50S ribosomal protein L30e-like DOE58_RS21075 IPR013223 Ribonuclease B, N-terminal OB domain DOE58_RS21075 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS21075 IPR001900 Ribonuclease II/R DOE58_RS21075 IPR003029 S1 domain DOE58_RS21075 IPR022967 RNA-binding domain, S1 DOE58_RS21075 IPR013668 Ribonuclease R winged-helix domain DOE58_RS21075 IPR022966 Ribonuclease II/R, conserved site DOE58_RS21075 IPR004476 Ribonuclease II/ribonuclease R DOE58_RS21075 IPR040476 RNase II/RNase R, cold shock domain DOE58_RS21075 IPR011129 Cold shock domain DOE58_RS21075 IPR011805 Ribonuclease R DOE58_RS21080 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21080 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21080 IPR023761 Transcriptional repressor HTH, NsrR DOE58_RS21080 IPR000944 Transcription regulator Rrf2-type DOE58_RS21090 IPR018220 Adenylosuccinate synthase, GTP-binding site DOE58_RS21090 IPR033128 Adenylosuccinate synthase, active site DOE58_RS21090 IPR042109 Adenylosuccinate synthetase, domain 1 DOE58_RS21090 IPR042110 Adenylosuccinate synthetase, domain 2 DOE58_RS21090 IPR042111 Adenylosuccinate synthetase, domain 3 DOE58_RS21090 IPR001114 Adenylosuccinate synthetase DOE58_RS21090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21095 IPR019201 Protein of unknown function DUF2065 DOE58_RS21100 IPR036013 Band 7/SPFH domain superfamily DOE58_RS21100 IPR010200 HflC DOE58_RS21100 IPR001107 Band 7 domain DOE58_RS21105 IPR036013 Band 7/SPFH domain superfamily DOE58_RS21105 IPR010201 HflK DOE58_RS21105 IPR001107 Band 7 domain DOE58_RS21105 IPR020980 Menbrane protein HflK, N-terminal DOE58_RS21105 IPR001972 Stomatin family DOE58_RS21110 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21110 IPR030394 HflX-type guanine nucleotide-binding (G) domain DOE58_RS21110 IPR042108 GTPase HflX, N-terminal domain superfamily DOE58_RS21110 IPR006073 GTP binding domain DOE58_RS21110 IPR016496 GTPase HflX DOE58_RS21110 IPR025121 GTPase HflX, N-terminal DOE58_RS21110 IPR032305 GTP-binding protein, middle domain DOE58_RS21110 IPR035647 EF-G domain III/V-like DOE58_RS21115 IPR005001 RNA-binding protein Hfq DOE58_RS21115 IPR010920 LSM domain superfamily DOE58_RS21120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21120 IPR018022 IPP transferase DOE58_RS21120 IPR039657 Dimethylallyltransferase DOE58_RS21125 IPR020667 DNA mismatch repair protein, MutL DOE58_RS21125 IPR014762 DNA mismatch repair, conserved site DOE58_RS21125 IPR002099 DNA mismatch repair protein family, N-terminal DOE58_RS21125 IPR013507 DNA mismatch repair protein, S5 domain 2-like DOE58_RS21125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS21125 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms DOE58_RS21125 IPR014790 MutL, C-terminal, dimerisation DOE58_RS21125 IPR042120 MutL, C-terminal domain, dimerisation subdomain DOE58_RS21125 IPR042121 MutL, C-terminal domain, regulatory subdomain DOE58_RS21125 IPR037198 MutL, C-terminal domain superfamily DOE58_RS21125 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS21125 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS21130 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DOE58_RS21135 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DOE58_RS21135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21140 IPR004443 YjeF N-terminal domain DOE58_RS21140 IPR029056 Ribokinase-like DOE58_RS21140 IPR036652 YjeF N-terminal domain superfamily DOE58_RS21140 IPR017953 Carbohydrate kinase, predicted, conserved site DOE58_RS21140 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr DOE58_RS21140 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DOE58_RS21145 IPR004453 Epoxyqueuosine reductase QueG DOE58_RS21145 IPR013542 Domain of unknown function DUF1730 DOE58_RS21145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS21145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS21165 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DOE58_RS21165 IPR001320 Ionotropic glutamate receptor DOE58_RS21165 IPR018313 Solute-binding protein family 3, conserved site DOE58_RS21165 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE58_RS21170 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE58_RS21170 IPR022894 Oligoribonuclease DOE58_RS21170 IPR012337 Ribonuclease H-like superfamily DOE58_RS21170 IPR036397 Ribonuclease H superfamily DOE58_RS21175 IPR004881 Ribosome biogenesis GTPase RsgA DOE58_RS21175 IPR010914 RsgA GTPase domain DOE58_RS21175 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DOE58_RS21175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21180 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 DOE58_RS21180 IPR033177 Phosphatidylserine decarboxylase DOE58_RS21180 IPR003817 Phosphatidylserine decarboxylase-related DOE58_RS21185 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DOE58_RS21185 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE58_RS21185 IPR011066 Mechanosensitive ion channel MscS, C-terminal DOE58_RS21185 IPR006685 Mechanosensitive ion channel MscS DOE58_RS21185 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DOE58_RS21185 IPR024393 Mechanosensitive ion channel MscS, porin domain DOE58_RS21185 IPR006686 Mechanosensitive ion channel MscS, conserved site DOE58_RS21185 IPR010920 LSM domain superfamily DOE58_RS21195 IPR002293 Amino acid/polyamine transporter I DOE58_RS21200 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DOE58_RS21200 IPR004525 Elongation factor P--(R)-beta-lysine ligase DOE58_RS21200 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DOE58_RS21200 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS21205 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DOE58_RS21205 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DOE58_RS21205 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS21205 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DOE58_RS21205 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DOE58_RS21205 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DOE58_RS21205 IPR005884 Fumarate reductase, flavoprotein subunit DOE58_RS21205 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DOE58_RS21210 IPR009051 Alpha-helical ferredoxin DOE58_RS21210 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DOE58_RS21210 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DOE58_RS21210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS21210 IPR036010 2Fe-2S ferredoxin-like superfamily DOE58_RS21210 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DOE58_RS21210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS21210 IPR012675 Beta-grasp domain superfamily DOE58_RS21210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DOE58_RS21215 IPR003510 Fumarate reductase, subunit C DOE58_RS21215 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE58_RS21220 IPR003418 Fumarate reductase, subunit D DOE58_RS21220 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DOE58_RS21225 IPR000566 Lipocalin/cytosolic fatty-acid binding domain DOE58_RS21225 IPR022272 Lipocalin family conserved site DOE58_RS21225 IPR002446 Lipocalin, bacterial DOE58_RS21225 IPR022271 Lipocalin, ApoD type DOE58_RS21225 IPR012674 Calycin DOE58_RS21230 IPR000390 Small multidrug resistance protein family DOE58_RS21235 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS21235 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS21235 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS21240 IPR012556 Entericidin A/B DOE58_RS21250 IPR012556 Entericidin A/B DOE58_RS21255 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS21255 IPR015365 Elongation factor P, C-terminal DOE58_RS21255 IPR001059 Translation elongation factor P/YeiP, central DOE58_RS21255 IPR013185 Translation elongation factor, KOW-like DOE58_RS21255 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS21255 IPR020599 Translation elongation factor P/YeiP DOE58_RS21255 IPR013852 Translation elongation factor P/YeiP, conserved site DOE58_RS21255 IPR011768 Translation elongation factor P DOE58_RS21255 IPR014722 Ribosomal protein L2, domain 2 DOE58_RS21260 IPR022462 Lysine-2,3-aminomutase-like DOE58_RS21260 IPR013785 Aldolase-type TIM barrel DOE58_RS21260 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DOE58_RS21260 IPR007197 Radical SAM DOE58_RS21265 IPR031810 YjeJ-like DOE58_RS21270 IPR025294 Protein of unknown function DUF4156 DOE58_RS21275 IPR001844 Chaperonin Cpn60 DOE58_RS21275 IPR018370 Chaperonin Cpn60, conserved site DOE58_RS21275 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DOE58_RS21275 IPR027413 GroEL-like equatorial domain superfamily DOE58_RS21275 IPR027409 GroEL-like apical domain superfamily DOE58_RS21275 IPR002423 Chaperonin Cpn60/TCP-1 family DOE58_RS21280 IPR011032 GroES-like superfamily DOE58_RS21280 IPR018369 Chaperonin GroES, conserved site DOE58_RS21280 IPR020818 GroES chaperonin family DOE58_RS21280 IPR037124 GroES chaperonin superfamily DOE58_RS21285 IPR002293 Amino acid/polyamine transporter I DOE58_RS21290 IPR007313 FxsA cytoplasmic membrane protein DOE58_RS21295 IPR020557 Fumarate lyase, conserved site DOE58_RS21295 IPR000362 Fumarate lyase family DOE58_RS21295 IPR008948 L-Aspartase-like DOE58_RS21295 IPR004708 Aspartate ammonia-lyase DOE58_RS21295 IPR024083 Fumarase/histidase, N-terminal DOE58_RS21295 IPR018951 Fumarase C, C-terminal DOE58_RS21295 IPR022761 Fumarate lyase, N-terminal DOE58_RS21300 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE58_RS21305 IPR004323 Divalent ion tolerance protein, CutA DOE58_RS21305 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria DOE58_RS21305 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE58_RS21305 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE58_RS21310 IPR035671 DsbD gamma DOE58_RS21310 IPR022910 Thiol:disulphide interchange protein DsbD DOE58_RS21310 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DOE58_RS21310 IPR036249 Thioredoxin-like superfamily DOE58_RS21310 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DOE58_RS21310 IPR013766 Thioredoxin domain DOE58_RS21310 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DOE58_RS21310 IPR017937 Thioredoxin, conserved site DOE58_RS21315 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS21315 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS21315 IPR009057 Homeobox-like domain superfamily DOE58_RS21330 IPR001011 Acid phosphatase, class A, bacterial DOE58_RS21330 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE58_RS21330 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE58_RS21330 IPR018296 Acid phosphatase, class A, bacterial, conserved site DOE58_RS21335 IPR009722 SdiA-regulated DOE58_RS21335 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS21370 IPR003467 Fimbrial, major/minor subunit DOE58_RS21380 IPR035191 K88 minor fimbrial subunit FaeF DOE58_RS21385 IPR013783 Immunoglobulin-like fold DOE58_RS21385 IPR008962 PapD-like superfamily DOE58_RS21385 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DOE58_RS21385 IPR001829 Pili assembly chaperone, bacterial DOE58_RS21385 IPR016147 Pili assembly chaperone, N-terminal DOE58_RS21385 IPR018046 Pili assembly chaperone, conserved site DOE58_RS21390 IPR018030 Fimbrial membrane usher, conserved site DOE58_RS21390 IPR042186 Outer membrane usher protein FimD, plug domain DOE58_RS21390 IPR000015 Outer membrane usher protein DOE58_RS21390 IPR037224 PapC, N-terminal domain superfamily DOE58_RS21390 IPR025885 PapC, N-terminal domain DOE58_RS21395 IPR008966 Adhesion domain superfamily DOE58_RS21395 IPR016372 K88 fimbrial protein A DOE58_RS21395 IPR036937 Fimbrial-type adhesion domain superfamily DOE58_RS21400 IPR004356 Adhesin operon regulatory protein DOE58_RS21430 IPR018062 HTH domain AraC-type, conserved site DOE58_RS21430 IPR009057 Homeobox-like domain superfamily DOE58_RS21430 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS21430 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS21435 IPR011006 CheY-like superfamily DOE58_RS21435 IPR000792 Transcription regulator LuxR, C-terminal DOE58_RS21435 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21435 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS21435 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS21435 IPR030864 Transcriptional regulatory protein RcsB DOE58_RS21440 IPR003593 AAA+ ATPase domain DOE58_RS21440 IPR003439 ABC transporter-like DOE58_RS21440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21440 IPR023693 ABC transporter, vitamin B12, BtuD DOE58_RS21450 IPR009722 SdiA-regulated DOE58_RS21450 IPR011042 Six-bladed beta-propeller, TolB-like DOE58_RS21460 IPR036411 TorD-like superfamily DOE58_RS21460 IPR020945 DMSO/Nitrate reductase chaperone DOE58_RS21460 IPR026269 Tat proofreading chaperone DmsD-type DOE58_RS21460 IPR028611 Tat proofreading chaperone DmsD DOE58_RS21465 IPR007059 DMSO reductase anchor subunit (DmsC) DOE58_RS21470 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS21470 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS21470 IPR014297 Dimethylsulphoxide reductase, chain B DOE58_RS21475 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS21475 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS21475 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS21475 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE DOE58_RS21475 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS21475 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS21475 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS21475 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS21475 IPR006656 Molybdopterin oxidoreductase DOE58_RS21480 IPR005467 Histidine kinase domain DOE58_RS21480 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB DOE58_RS21480 IPR039506 SpoOB, alpha-helical domain DOE58_RS21480 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS21480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS21480 IPR029151 Periplasmic sensor-like domain superfamily DOE58_RS21480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS21480 IPR033463 Single cache domain 3 DOE58_RS21480 IPR000014 PAS domain DOE58_RS21480 IPR013767 PAS fold DOE58_RS21480 IPR035965 PAS domain superfamily DOE58_RS21485 IPR011006 CheY-like superfamily DOE58_RS21485 IPR024187 Signal transduction response regulator, citrate/malate metabolism DOE58_RS21485 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS21495 IPR004668 Anaerobic c4-dicarboxylate membrane transporter DOE58_RS21500 IPR020557 Fumarate lyase, conserved site DOE58_RS21500 IPR011167 Iron-dependent fumarate hydratase DOE58_RS21500 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DOE58_RS21500 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DOE58_RS21500 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DOE58_RS21505 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS21505 IPR039672 Lactose permease-like DOE58_RS21505 IPR036259 MFS transporter superfamily DOE58_RS21505 IPR001927 Sodium:galactoside symporter DOE58_RS21510 IPR022616 Glycosyl hydrolase, family 4, C-terminal DOE58_RS21510 IPR001088 Glycoside hydrolase, family 4 DOE58_RS21510 IPR019802 Glycoside hydrolase, family 4, conserved site DOE58_RS21510 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DOE58_RS21510 IPR036291 NAD(P)-binding domain superfamily DOE58_RS21515 IPR018062 HTH domain AraC-type, conserved site DOE58_RS21515 IPR014710 RmlC-like jelly roll fold DOE58_RS21515 IPR011051 RmlC-like cupin domain superfamily DOE58_RS21515 IPR009057 Homeobox-like domain superfamily DOE58_RS21515 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily DOE58_RS21515 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS21515 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS21520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS21520 IPR011193 Ornithine/lysine/arginine decarboxylase DOE58_RS21520 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS21520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS21520 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DOE58_RS21520 IPR000310 Orn/Lys/Arg decarboxylase, major domain DOE58_RS21520 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DOE58_RS21520 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DOE58_RS21525 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS21525 IPR009057 Homeobox-like domain superfamily DOE58_RS21525 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS21525 IPR018062 HTH domain AraC-type, conserved site DOE58_RS21530 IPR002293 Amino acid/polyamine transporter I DOE58_RS21535 IPR012549 Phosphoethanolamine transferase, N-terminal DOE58_RS21535 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS21535 IPR040423 Phosphoethanolamine transferase DOE58_RS21535 IPR000917 Sulfatase, N-terminal DOE58_RS21540 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21540 IPR011006 CheY-like superfamily DOE58_RS21540 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS21540 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS21540 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS21540 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS21545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS21545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS21545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS21545 IPR005467 Histidine kinase domain DOE58_RS21545 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS21545 IPR003660 HAMP domain DOE58_RS21545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS21555 IPR005829 Sugar transporter, conserved site DOE58_RS21555 IPR015041 Osmosensory transporter coiled coil DOE58_RS21555 IPR004736 MFS transporter, metabolite:H symporter DOE58_RS21555 IPR020846 Major facilitator superfamily domain DOE58_RS21555 IPR005828 Major facilitator, sugar transporter-like DOE58_RS21555 IPR036259 MFS transporter superfamily DOE58_RS21555 IPR036292 Proline/betaine transporter ProP, C-terminal DOE58_RS21560 IPR004624 PhnA protein DOE58_RS21560 IPR013988 PhnA protein, C-terminal DOE58_RS21560 IPR013987 PhnA protein, N-terminal DOE58_RS21565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE58_RS21565 IPR028973 PhnB-like DOE58_RS21570 IPR000182 GNAT domain DOE58_RS21570 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS21585 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS21585 IPR006597 Sel1-like repeat DOE58_RS21590 IPR034703 Proton/glutamate-aspartate symporter GltP DOE58_RS21590 IPR036458 Sodium:dicarboxylate symporter superfamily DOE58_RS21590 IPR018107 Sodium:dicarboxylate symporter, conserved site DOE58_RS21590 IPR033380 Glutamate-aspartate symport protein GltP/GltT DOE58_RS21590 IPR001991 Sodium:dicarboxylate symporter DOE58_RS21595 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS21595 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS21595 IPR019734 Tetratricopeptide repeat DOE58_RS21600 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF DOE58_RS21600 IPR005616 CcmH/CycL/Ccl2/NrfF family DOE58_RS21600 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DOE58_RS21605 IPR003567 Cytochrome c-type biogenesis protein DOE58_RS21605 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DOE58_RS21605 IPR003570 Cytochrome c-type biogenesis protein NrfE DOE58_RS21605 IPR002541 Cytochrome c assembly protein DOE58_RS21605 IPR003568 Cytochrome c-type biogenesis protein CcmF DOE58_RS21610 IPR005614 NrfD family DOE58_RS21610 IPR017566 NrfD DOE58_RS21615 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE58_RS21615 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS21615 IPR017567 Cytochrome c nitrite reductase, Fe-S protein DOE58_RS21615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS21615 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS21620 IPR036280 Multiheme cytochrome superfamily DOE58_RS21620 IPR011031 Multihaem cytochrome DOE58_RS21620 IPR023155 Cytochrome c-552/4 DOE58_RS21620 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit DOE58_RS21620 IPR010177 Doubled CXXCH motif DOE58_RS21625 IPR003321 Cytochrome c552 DOE58_RS21625 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit DOE58_RS21625 IPR036280 Multiheme cytochrome superfamily DOE58_RS21625 IPR011031 Multihaem cytochrome DOE58_RS21635 IPR025110 AMP-binding enzyme, C-terminal domain DOE58_RS21635 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DOE58_RS21635 IPR000873 AMP-dependent synthetase/ligase DOE58_RS21635 IPR011904 Acetate-CoA ligase DOE58_RS21635 IPR042099 AMP-dependent synthetase-like superfamily DOE58_RS21635 IPR020845 AMP-binding, conserved site DOE58_RS21645 IPR007436 Protein of unknown function DUF485 DOE58_RS21650 IPR014083 Cation/acetate symporter ActP DOE58_RS21650 IPR001734 Sodium/solute symporter DOE58_RS21650 IPR018212 Sodium/solute symporter, conserved site DOE58_RS21650 IPR038377 Sodium/glucose symporter superfamily DOE58_RS21655 IPR005261 Conserved hypothetical protein CHP00659 DOE58_RS21655 IPR007300 CidB/LrgB family DOE58_RS21660 IPR023760 Holin-like protein CidA DOE58_RS21660 IPR005538 LrgA/CidA family DOE58_RS21665 IPR005119 LysR, substrate-binding DOE58_RS21665 IPR000847 Transcription regulator HTH, LysR DOE58_RS21665 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21665 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21670 IPR018422 Cation/H+ exchanger, CPA1 family DOE58_RS21670 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria DOE58_RS21670 IPR006153 Cation/H+ exchanger DOE58_RS21670 IPR038770 Sodium/solute symporter superfamily DOE58_RS21680 IPR006043 Xanthine/uracil/vitamin C permease DOE58_RS21695 IPR009061 Putative DNA-binding domain superfamily DOE58_RS21695 IPR010211 Redox-sensitive transcriptional activator SoxR DOE58_RS21695 IPR000551 MerR-type HTH domain DOE58_RS21695 IPR015358 Transcription regulator MerR, DNA binding DOE58_RS21700 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS21700 IPR009057 Homeobox-like domain superfamily DOE58_RS21700 IPR018062 HTH domain AraC-type, conserved site DOE58_RS21700 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS21705 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DOE58_RS21705 IPR001633 EAL domain DOE58_RS21705 IPR035919 EAL domain superfamily DOE58_RS21710 IPR016958 Uncharacterised conserved protein UCP030798 DOE58_RS21720 IPR002686 Transposase IS200-like DOE58_RS21720 IPR036515 Transposase IS200-like superfamily DOE58_RS21730 IPR011527 ABC transporter type 1, transmembrane domain DOE58_RS21730 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21730 IPR003593 AAA+ ATPase domain DOE58_RS21730 IPR011917 ABC transporter, lipid A export, MsbA DOE58_RS21730 IPR017871 ABC transporter, conserved site DOE58_RS21730 IPR003439 ABC transporter-like DOE58_RS21730 IPR036640 ABC transporter type 1, transmembrane domain superfamily DOE58_RS21765 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS21765 IPR000424 Primosome PriB/single-strand DNA-binding DOE58_RS21765 IPR011344 Single-stranded DNA-binding protein DOE58_RS21775 IPR041102 UvrA, interaction domain DOE58_RS21775 IPR017871 ABC transporter, conserved site DOE58_RS21775 IPR041552 UvrA DNA-binding domain DOE58_RS21775 IPR004602 UvrABC system subunit A DOE58_RS21775 IPR003439 ABC transporter-like DOE58_RS21775 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21790 IPR038056 YjbR-like superfamily DOE58_RS21790 IPR007351 Uncharacterised protein YjbR DOE58_RS21795 IPR035917 YjbQ-like superfamily DOE58_RS21795 IPR001602 Uncharacterised protein family UPF0047 DOE58_RS21800 IPR036412 HAD-like superfamily DOE58_RS21800 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA DOE58_RS21800 IPR023214 HAD superfamily DOE58_RS21800 IPR005519 Acid phosphatase, class B-like DOE58_RS21810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS21810 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS21810 IPR004839 Aminotransferase, class I/classII DOE58_RS21810 IPR000796 Aspartate/other aminotransferase DOE58_RS21810 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DOE58_RS21810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS21815 IPR029066 PLP-binding barrel DOE58_RS21815 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DOE58_RS21815 IPR011079 Alanine racemase, C-terminal DOE58_RS21815 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DOE58_RS21815 IPR000821 Alanine racemase DOE58_RS21815 IPR001608 Alanine racemase, N-terminal DOE58_RS21820 IPR003593 AAA+ ATPase domain DOE58_RS21820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21820 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE58_RS21820 IPR007693 DNA helicase, DnaB-like, N-terminal DOE58_RS21820 IPR007694 DNA helicase, DnaB-like, C-terminal DOE58_RS21820 IPR007692 DNA helicase, DnaB type DOE58_RS21820 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DOE58_RS21825 IPR013149 Alcohol dehydrogenase, C-terminal DOE58_RS21825 IPR013154 Alcohol dehydrogenase, N-terminal DOE58_RS21825 IPR011032 GroES-like superfamily DOE58_RS21825 IPR036291 NAD(P)-binding domain superfamily DOE58_RS21825 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DOE58_RS21825 IPR020843 Polyketide synthase, enoylreductase domain DOE58_RS21830 IPR014318 Phage shock protein, PspG DOE58_RS21835 IPR035587 DUS-like, FMN-binding domain DOE58_RS21835 IPR004653 tRNA-dihydrouridine(20/20a) synthase DOE58_RS21835 IPR018517 tRNA-dihydrouridine synthase, conserved site DOE58_RS21835 IPR001269 tRNA-dihydrouridine synthase DOE58_RS21835 IPR013785 Aldolase-type TIM barrel DOE58_RS21845 IPR002481 Ferric-uptake regulator DOE58_RS21845 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21845 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21850 IPR026042 Stress response protein YjbJ DOE58_RS21850 IPR008462 CsbD-like domain DOE58_RS21850 IPR036629 YjbJ superfamily DOE58_RS21860 IPR002528 Multi antimicrobial extrusion protein DOE58_RS21865 IPR006199 LexA repressor, DNA-binding domain DOE58_RS21865 IPR015927 Peptidase S24/S26A/S26B/S26C DOE58_RS21865 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21865 IPR036286 LexA/Signal peptidase-like superfamily DOE58_RS21865 IPR006197 Peptidase S24, LexA-like DOE58_RS21865 IPR039418 LexA-like DOE58_RS21865 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21865 IPR006200 Transcription regulator LexA DOE58_RS21870 IPR036945 Diacylglycerol kinase (DAGK) superfamily DOE58_RS21870 IPR033718 Diacylglycerol kinase, prokaryotic DOE58_RS21870 IPR000829 DAGK family DOE58_RS21875 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase DOE58_RS21875 IPR041728 GPAT/DHAPAT, acyltransferase domain DOE58_RS21875 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB DOE58_RS21875 IPR002123 Phospholipid/glycerol acyltransferase DOE58_RS21880 IPR030470 UbiA prenyltransferase conserved site DOE58_RS21880 IPR039653 Prenyltransferase DOE58_RS21880 IPR006370 4-hydroxybenzoate polyprenyltransferase-like DOE58_RS21880 IPR000537 UbiA prenyltransferase family DOE58_RS21885 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE58_RS21885 IPR007440 Chorismate--pyruvate lyase DOE58_RS21890 IPR010794 Maltose operon periplasmic DOE58_RS21895 IPR003192 Porin, LamB-type DOE58_RS21895 IPR036998 Porin, LamB-type superfamily DOE58_RS21895 IPR023738 Maltoporin DOE58_RS21900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS21900 IPR015855 ABC transporter, maltose/maltodextrin import, MalK DOE58_RS21900 IPR003439 ABC transporter-like DOE58_RS21900 IPR017871 ABC transporter, conserved site DOE58_RS21900 IPR040582 MalK, OB fold domain DOE58_RS21900 IPR003593 AAA+ ATPase domain DOE58_RS21900 IPR008995 Molybdate/tungstate binding, C-terminal DOE58_RS21905 IPR006059 Bacterial extracellular solute-binding protein DOE58_RS21905 IPR006061 Solute-binding family 1, conserved site DOE58_RS21905 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein DOE58_RS21910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS21910 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like DOE58_RS21910 IPR029345 Maltose transport system permease protein MalF, P2 domain DOE58_RS21910 IPR035277 MalF, N-terminal DOE58_RS21910 IPR035906 MetI-like superfamily DOE58_RS21915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS21915 IPR035906 MetI-like superfamily DOE58_RS21920 IPR005829 Sugar transporter, conserved site DOE58_RS21920 IPR003663 Sugar/inositol transporter DOE58_RS21920 IPR005828 Major facilitator, sugar transporter-like DOE58_RS21920 IPR020846 Major facilitator superfamily domain DOE58_RS21920 IPR036259 MFS transporter superfamily DOE58_RS21925 IPR009315 Phosphate-starvation-induced PsiE DOE58_RS21925 IPR020948 Phosphate-starvation-induced PsiE-like DOE58_RS21930 IPR010344 Exopolysaccharide biosynthesis protein YbjH DOE58_RS21935 IPR010425 Domain of unknown function DUF1017 DOE58_RS21940 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB DOE58_RS21940 IPR023373 YmcC-like superfamily DOE58_RS21950 IPR035482 Phosphoglucose isomerase, SIS domain 2 DOE58_RS21950 IPR023096 Phosphoglucose isomerase, C-terminal DOE58_RS21950 IPR001672 Phosphoglucose isomerase (PGI) DOE58_RS21950 IPR035476 Phosphoglucose isomerase, SIS domain 1 DOE58_RS21950 IPR018189 Phosphoglucose isomerase, conserved site DOE58_RS21955 IPR002912 ACT domain DOE58_RS21955 IPR018042 Aspartate kinase, conserved site DOE58_RS21955 IPR001341 Aspartate kinase DOE58_RS21955 IPR005260 Aspartate kinase, monofunctional class DOE58_RS21955 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS21955 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain DOE58_RS21955 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS21975 IPR000150 Cof family DOE58_RS21975 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS21975 IPR023214 HAD superfamily DOE58_RS21975 IPR036412 HAD-like superfamily DOE58_RS21980 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS21980 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS21980 IPR014036 DeoR C-terminal sensor domain DOE58_RS21980 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS21980 IPR001034 DeoR-type HTH domain DOE58_RS21980 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS21980 IPR037171 NagB/RpiA transferase-like DOE58_RS21990 IPR020317 Uncharacterised protein family YjbD DOE58_RS21995 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DOE58_RS21995 IPR020103 Pseudouridine synthase, catalytic domain superfamily DOE58_RS21995 IPR006145 Pseudouridine synthase, RsuA/RluA DOE58_RS21995 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DOE58_RS21995 IPR036986 RNA-binding S4 domain superfamily DOE58_RS21995 IPR002942 RNA-binding S4 domain DOE58_RS21995 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DOE58_RS22000 IPR018636 Protein of unknown function DUF2058 DOE58_RS22010 IPR023172 Peptidase S51, dipeptidase E DOE58_RS22010 IPR005320 Peptidase S51 DOE58_RS22010 IPR029062 Class I glutamine amidotransferase-like DOE58_RS22015 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein DOE58_RS22015 IPR003841 Sodium-dependent phosphate transport protein DOE58_RS22020 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DOE58_RS22020 IPR036589 Homocysteine-binding domain superfamily DOE58_RS22020 IPR003726 Homocysteine-binding domain DOE58_RS22020 IPR006158 Cobalamin (vitamin B12)-binding domain DOE58_RS22020 IPR036724 Cobalamin-binding domain superfamily DOE58_RS22020 IPR000489 Pterin-binding domain DOE58_RS22020 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily DOE58_RS22020 IPR033706 Methionine synthase, B12-binding domain DOE58_RS22020 IPR011822 Cobalamin-dependent methionine synthase DOE58_RS22020 IPR011005 Dihydropteroate synthase-like DOE58_RS22020 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DOE58_RS22020 IPR036594 Methionine synthase domain DOE58_RS22025 IPR005471 Transcription regulator IclR, N-terminal DOE58_RS22025 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22025 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS22025 IPR014757 Transcription regulator IclR, C-terminal DOE58_RS22025 IPR029016 GAF-like domain superfamily DOE58_RS22035 IPR010452 Isocitrate dehydrogenase kinasephosphatase DOE58_RS22040 IPR039556 ICL/PEPM domain DOE58_RS22040 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DOE58_RS22040 IPR006254 Isocitrate lyase DOE58_RS22040 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS22040 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS22045 IPR011076 Malate synthase-like superfamily DOE58_RS22045 IPR019830 Malate synthase, conserved site DOE58_RS22045 IPR001465 Malate synthase DOE58_RS22045 IPR006252 Malate synthase A DOE58_RS22050 IPR033752 MetA family DOE58_RS22050 IPR005697 Homoserine O-succinyltransferase MetA DOE58_RS22050 IPR029062 Class I glutamine amidotransferase-like DOE58_RS22055 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS22055 IPR000182 GNAT domain DOE58_RS22080 IPR036914 Methylglyoxal synthase-like domain superfamily DOE58_RS22080 IPR024051 AICAR transformylase, duplicated domain superfamily DOE58_RS22080 IPR016193 Cytidine deaminase-like DOE58_RS22080 IPR011607 Methylglyoxal synthase-like domain DOE58_RS22080 IPR002695 Bifunctional purine biosynthesis protein PurH-like DOE58_RS22085 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DOE58_RS22085 IPR011054 Rudiment single hybrid motif DOE58_RS22085 IPR011761 ATP-grasp fold DOE58_RS22085 IPR013815 ATP-grasp fold, subdomain 1 DOE58_RS22085 IPR000115 Phosphoribosylglycinamide synthetase DOE58_RS22085 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DOE58_RS22085 IPR020559 Phosphoribosylglycinamide synthetase, conserved site DOE58_RS22085 IPR016185 Pre-ATP-grasp domain superfamily DOE58_RS22085 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DOE58_RS22085 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOE58_RS22090 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS22090 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS22090 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS22090 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS22090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22090 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS22090 IPR009057 Homeobox-like domain superfamily DOE58_RS22090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS22090 IPR011006 CheY-like superfamily DOE58_RS22090 IPR003593 AAA+ ATPase domain DOE58_RS22095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS22095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS22095 IPR005467 Histidine kinase domain DOE58_RS22095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS22095 IPR029151 Periplasmic sensor-like domain superfamily DOE58_RS22095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS22095 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS22100 IPR025961 Heavy-metal resistance protein DOE58_RS22105 IPR016500 Uncharacterised conserved protein UCP006993 DOE58_RS22105 IPR010858 Protein of unknown function DUF1481 DOE58_RS22110 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DOE58_RS22110 IPR000119 Histone-like DNA-binding protein DOE58_RS22110 IPR020816 Histone-like DNA-binding protein, conserved site DOE58_RS22115 IPR007338 Protein of unknown function DUF416 DOE58_RS22115 IPR023381 YP001051499.1-like domain superfamily DOE58_RS22120 IPR007581 Endonuclease V DOE58_RS22125 IPR038071 UROD/MetE-like superfamily DOE58_RS22125 IPR006361 Uroporphyrinogen decarboxylase HemE DOE58_RS22125 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DOE58_RS22130 IPR022925 NADH pyrophosphatase NudC DOE58_RS22130 IPR015376 Zinc ribbon, NADH pyrophosphatase DOE58_RS22130 IPR000086 NUDIX hydrolase domain DOE58_RS22130 IPR020084 NUDIX hydrolase, conserved site DOE58_RS22130 IPR015797 NUDIX hydrolase-like domain superfamily DOE58_RS22135 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd DOE58_RS22135 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DOE58_RS22135 IPR038309 Rsd/AlgQ superfamily DOE58_RS22140 IPR025747 ThiC-associated domain DOE58_RS22140 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B DOE58_RS22140 IPR037509 Phosphomethylpyrimidine synthase DOE58_RS22140 IPR038521 ThiC/Bza superfamily DOE58_RS22145 IPR013785 Aldolase-type TIM barrel DOE58_RS22145 IPR036206 Thiamin phosphate synthase superfamily DOE58_RS22145 IPR034291 Thiamine phosphate synthase DOE58_RS22145 IPR022998 Thiamine phosphate synthase/TenI DOE58_RS22150 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF DOE58_RS22150 IPR000594 THIF-type NAD/FAD binding fold DOE58_RS22150 IPR035985 Ubiquitin-activating enzyme DOE58_RS22155 IPR012675 Beta-grasp domain superfamily DOE58_RS22155 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE58_RS22155 IPR010035 ThiS, thiamine-biosynthesis DOE58_RS22155 IPR003749 Sulfur carrier ThiS/MoaD-like DOE58_RS22160 IPR008867 Thiazole synthase DOE58_RS22160 IPR033983 Thiazole synthase ThiG DOE58_RS22160 IPR013785 Aldolase-type TIM barrel DOE58_RS22165 IPR034428 ThiH/NocL/HydG-like DOE58_RS22165 IPR013785 Aldolase-type TIM barrel DOE58_RS22165 IPR007197 Radical SAM DOE58_RS22165 IPR010722 Biotin and thiamin synthesis-associated domain DOE58_RS22165 IPR012726 Thiazole biosynthesis ThiH DOE58_RS22200 IPR007080 RNA polymerase Rpb1, domain 1 DOE58_RS22200 IPR038120 RNA polymerase Rpb1, funnel domain superfamily DOE58_RS22200 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DOE58_RS22200 IPR007083 RNA polymerase Rpb1, domain 4 DOE58_RS22200 IPR006592 RNA polymerase, N-terminal DOE58_RS22200 IPR007081 RNA polymerase Rpb1, domain 5 DOE58_RS22200 IPR042102 RNA polymerase Rpb1, domain 3 superfamily DOE58_RS22200 IPR007066 RNA polymerase Rpb1, domain 3 DOE58_RS22200 IPR000722 RNA polymerase, alpha subunit DOE58_RS22205 IPR007642 RNA polymerase Rpb2, domain 2 DOE58_RS22205 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily DOE58_RS22205 IPR007644 RNA polymerase, beta subunit, protrusion DOE58_RS22205 IPR014724 RNA polymerase Rpb2, OB-fold DOE58_RS22205 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type DOE58_RS22205 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain DOE58_RS22205 IPR007121 RNA polymerase, beta subunit, conserved site DOE58_RS22205 IPR007641 RNA polymerase Rpb2, domain 7 DOE58_RS22205 IPR007645 RNA polymerase Rpb2, domain 3 DOE58_RS22205 IPR037034 RNA polymerase Rpb2, domain 2 superfamily DOE58_RS22205 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DOE58_RS22205 IPR015712 DNA-directed RNA polymerase, subunit 2 DOE58_RS22210 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE58_RS22210 IPR013823 Ribosomal protein L7/L12, C-terminal DOE58_RS22210 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DOE58_RS22210 IPR008932 Ribosomal protein L7/L12, oligomerisation DOE58_RS22210 IPR000206 Ribosomal protein L7/L12 DOE58_RS22215 IPR022973 Ribosomal protein L10 DOE58_RS22215 IPR002363 Ribosomal protein L10, eubacterial, conserved site DOE58_RS22215 IPR001790 Ribosomal protein L10P DOE58_RS22225 IPR002143 Ribosomal protein L1 DOE58_RS22225 IPR023673 Ribosomal protein L1, conserved site DOE58_RS22225 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DOE58_RS22225 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DOE58_RS22225 IPR023674 Ribosomal protein L1-like DOE58_RS22225 IPR005878 Ribosomal protein L1, bacterial-type DOE58_RS22230 IPR006519 Ribosomal protein L11, bacterial-type DOE58_RS22230 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DOE58_RS22230 IPR020785 Ribosomal protein L11, conserved site DOE58_RS22230 IPR000911 Ribosomal protein L11/L12 DOE58_RS22230 IPR020784 Ribosomal protein L11, N-terminal DOE58_RS22230 IPR020783 Ribosomal protein L11, C-terminal DOE58_RS22230 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DOE58_RS22235 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DOE58_RS22235 IPR005824 KOW DOE58_RS22235 IPR008991 Translation protein SH3-like domain superfamily DOE58_RS22235 IPR036735 NusG, N-terminal domain superfamily DOE58_RS22235 IPR006645 NusG, N-terminal DOE58_RS22235 IPR014722 Ribosomal protein L2, domain 2 DOE58_RS22235 IPR001062 Transcription antitermination protein, NusG DOE58_RS22240 IPR005807 SecE subunit of protein translocation complex, bacterial-like DOE58_RS22240 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DOE58_RS22240 IPR038379 SecE superfamily DOE58_RS22245 IPR000795 Transcription factor, GTP-binding domain DOE58_RS22245 IPR031157 Tr-type G domain, conserved site DOE58_RS22245 IPR005225 Small GTP-binding protein domain DOE58_RS22245 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DOE58_RS22245 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE58_RS22245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22245 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS22245 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOE58_RS22245 IPR033720 Elongation factor Tu, domain 2 DOE58_RS22245 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DOE58_RS22245 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS22280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22280 IPR004566 Pantothenate kinase DOE58_RS22280 IPR006083 Phosphoribulokinase/uridine kinase DOE58_RS22285 IPR004409 Biotin operon repressor, helix-turn-helix domain DOE58_RS22285 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DOE58_RS22285 IPR003142 Biotin protein ligase, C-terminal DOE58_RS22285 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DOE58_RS22285 IPR013196 Helix-turn-helix, type 11 DOE58_RS22285 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22285 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS22285 IPR030855 Bifunctional ligase/repressor BirA DOE58_RS22285 IPR008988 Transcriptional repressor, C-terminal DOE58_RS22290 IPR036318 FAD-binding, type PCMH-like superfamily DOE58_RS22290 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE58_RS22290 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE58_RS22290 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DOE58_RS22290 IPR016166 FAD-binding domain, PCMH-type DOE58_RS22290 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DOE58_RS22290 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DOE58_RS22290 IPR006094 FAD linked oxidase, N-terminal DOE58_RS22330 IPR018187 Asp/Glu racemase, active site 1 DOE58_RS22330 IPR004391 Glutamate racemase DOE58_RS22330 IPR001920 Asp/Glu racemase DOE58_RS22330 IPR033134 Asp/Glu racemase, active site 2 DOE58_RS22330 IPR015942 Asp/Glu/hydantoin racemase DOE58_RS22335 IPR037066 TonB-dependent receptor, plug domain superfamily DOE58_RS22335 IPR012910 TonB-dependent receptor, plug domain DOE58_RS22335 IPR000531 TonB-dependent receptor-like, beta-barrel DOE58_RS22335 IPR010917 TonB-dependent receptor, conserved site DOE58_RS22335 IPR010916 TonB box, conserved site DOE58_RS22335 IPR010101 TonB-dependent vitamin B12 transporter BtuB DOE58_RS22335 IPR039426 Vitamin B12 transporter BtuB-like DOE58_RS22335 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DOE58_RS22340 IPR030391 RNA methyltransferase TrmA, conserved site DOE58_RS22340 IPR030390 RNA methyltransferase TrmA, active site DOE58_RS22340 IPR010280 (Uracil-5)-methyltransferase family DOE58_RS22340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS22340 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA DOE58_RS22345 IPR009867 Protein of unknown function DUF1422 DOE58_RS22350 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS22350 IPR023764 Transcriptional repressor HTH, FabR DOE58_RS22350 IPR009057 Homeobox-like domain superfamily DOE58_RS22355 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS22355 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE58_RS22355 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DOE58_RS22355 IPR023753 FAD/NAD(P)-binding domain DOE58_RS22355 IPR022962 Soluble pyridine nucleotide transhydrogenase DOE58_RS22355 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DOE58_RS22360 IPR005119 LysR, substrate-binding DOE58_RS22360 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22360 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS22360 IPR000847 Transcription regulator HTH, LysR DOE58_RS22370 IPR009049 Argininosuccinate lyase DOE58_RS22370 IPR029419 Argininosuccinate lyase, C-terminal DOE58_RS22370 IPR024083 Fumarase/histidase, N-terminal DOE58_RS22370 IPR020557 Fumarate lyase, conserved site DOE58_RS22370 IPR000362 Fumarate lyase family DOE58_RS22370 IPR022761 Fumarate lyase, N-terminal DOE58_RS22370 IPR008948 L-Aspartase-like DOE58_RS22375 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS22375 IPR037528 Acetylglutamate kinase ArgB DOE58_RS22375 IPR004662 Acetylglutamate kinase family DOE58_RS22375 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS22375 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic DOE58_RS22380 IPR000534 Semialdehyde dehydrogenase, NAD-binding DOE58_RS22380 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DOE58_RS22380 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 DOE58_RS22380 IPR036291 NAD(P)-binding domain superfamily DOE58_RS22380 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site DOE58_RS22385 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DOE58_RS22385 IPR010169 Acetylornithine deacetylase ArgE DOE58_RS22385 IPR011650 Peptidase M20, dimerisation domain DOE58_RS22385 IPR036264 Bacterial exopeptidase dimerisation domain DOE58_RS22385 IPR002933 Peptidase M20 DOE58_RS22395 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type DOE58_RS22395 IPR021135 Phosphoenolpyruvate carboxylase DOE58_RS22395 IPR033129 Phosphoenolpyruvate carboxylase, His active site DOE58_RS22395 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS22395 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site DOE58_RS22400 IPR040423 Phosphoethanolamine transferase DOE58_RS22400 IPR000917 Sulfatase, N-terminal DOE58_RS22400 IPR017850 Alkaline-phosphatase-like, core domain superfamily DOE58_RS22405 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS22405 IPR018062 HTH domain AraC-type, conserved site DOE58_RS22405 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS22405 IPR009057 Homeobox-like domain superfamily DOE58_RS22410 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS22410 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS22410 IPR036095 PTS system IIB component-like superfamily DOE58_RS22410 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE58_RS22415 IPR034457 Organic radical-activating enzymes DOE58_RS22415 IPR007197 Radical SAM DOE58_RS22415 IPR001989 Radical-activating enzyme, conserved site DOE58_RS22415 IPR012839 Organic radical enzyme activase DOE58_RS22415 IPR040074 BssD/PflA/YjjW DOE58_RS22415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS22415 IPR013785 Aldolase-type TIM barrel DOE58_RS22420 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE58_RS22420 IPR001150 Glycine radical domain DOE58_RS22420 IPR004184 Pyruvate formate lyase domain DOE58_RS22420 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family DOE58_RS22425 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS22425 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS22425 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE58_RS22425 IPR036095 PTS system IIB component-like superfamily DOE58_RS22430 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS22430 IPR006327 Phosphotransferase system, fructose IIC component DOE58_RS22435 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DOE58_RS22435 IPR040442 Pyruvate kinase-like domain superfamily DOE58_RS22435 IPR036618 PtsI, HPr-binding domain superfamily DOE58_RS22435 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE58_RS22435 IPR008731 Phosphotransferase system, enzyme I N-terminal DOE58_RS22435 IPR002178 PTS EIIA type-2 domain DOE58_RS22435 IPR006318 Phosphotransferase system, enzyme I-like DOE58_RS22435 IPR016152 Phosphotransferase/anion transporter DOE58_RS22435 IPR036637 Phosphohistidine domain superfamily DOE58_RS22435 IPR008279 PEP-utilising enzyme, mobile domain DOE58_RS22435 IPR000121 PEP-utilising enzyme, C-terminal DOE58_RS22435 IPR023151 PEP-utilising enzyme, conserved site DOE58_RS22435 IPR035895 HPr-like superfamily DOE58_RS22435 IPR000032 Phosphocarrier protein HPr-like DOE58_RS22435 IPR018274 PEP-utilising enzyme, active site DOE58_RS22440 IPR023001 Fructose-6-phosphate aldolase DOE58_RS22440 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase DOE58_RS22440 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DOE58_RS22440 IPR013785 Aldolase-type TIM barrel DOE58_RS22440 IPR018225 Transaldolase, active site DOE58_RS22440 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial DOE58_RS22445 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS22445 IPR016205 Glycerol dehydrogenase DOE58_RS22445 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS22450 IPR019793 Peroxidases heam-ligand binding site DOE58_RS22450 IPR019794 Peroxidase, active site DOE58_RS22450 IPR010255 Haem peroxidase superfamily DOE58_RS22450 IPR002016 Haem peroxidase DOE58_RS22450 IPR000763 Catalase-peroxidase haem DOE58_RS22455 IPR029041 FAD-linked oxidoreductase-like DOE58_RS22455 IPR003171 Methylenetetrahydrofolate reductase DOE58_RS22455 IPR004620 5,10-methylenetetrahydrofolate reductase DOE58_RS22460 IPR008334 5'-Nucleotidase, C-terminal DOE58_RS22460 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DOE58_RS22460 IPR006146 5'-Nucleotidase, conserved site DOE58_RS22460 IPR006179 5'-Nucleotidase/apyrase DOE58_RS22460 IPR041498 Bacterial Ig domain DOE58_RS22460 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DOE58_RS22460 IPR029052 Metallo-dependent phosphatase-like DOE58_RS22480 IPR001342 Homoserine dehydrogenase, catalytic DOE58_RS22480 IPR036393 Acetylglutamate kinase-like superfamily DOE58_RS22480 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain DOE58_RS22480 IPR001048 Aspartate/glutamate/uridylate kinase DOE58_RS22480 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DOE58_RS22480 IPR001341 Aspartate kinase DOE58_RS22480 IPR018042 Aspartate kinase, conserved site DOE58_RS22480 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I DOE58_RS22480 IPR036291 NAD(P)-binding domain superfamily DOE58_RS22480 IPR019811 Homoserine dehydrogenase, conserved site DOE58_RS22485 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DOE58_RS22485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS22485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS22485 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS22485 IPR011821 O-succinylhomoserine (thiol)-lyase DOE58_RS22490 IPR023453 Methionine repressor MetJ domain superfamily DOE58_RS22490 IPR010985 Ribbon-helix-helix DOE58_RS22490 IPR002084 Methionine repressor MetJ DOE58_RS22495 IPR035391 Arylsulfotransferase, Ig-like domain DOE58_RS22495 IPR010262 Arylsulfotransferase, bacteria DOE58_RS22495 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria DOE58_RS22495 IPR038477 Arylsulfotransferase, N-terminal domain superfamily DOE58_RS22505 IPR027491 Ribosomal protein L31 type A DOE58_RS22505 IPR002150 Ribosomal protein L31 DOE58_RS22505 IPR042105 Ribosomal protein L31 superfamily DOE58_RS22505 IPR034704 L28p-like DOE58_RS22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22510 IPR001650 Helicase, C-terminal DOE58_RS22510 IPR011545 DEAD/DEAH box helicase domain DOE58_RS22510 IPR041222 Primosomal protein N', 3' DNA-binding domain DOE58_RS22510 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily DOE58_RS22510 IPR041236 Primosomal protein N, C-terminal domain DOE58_RS22510 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS22510 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain DOE58_RS22510 IPR005259 Primosomal protein N' DOE58_RS22515 IPR028082 Periplasmic binding protein-like I DOE58_RS22515 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS22515 IPR000843 LacI-type HTH domain DOE58_RS22520 IPR011930 Cell division protein FtsN DOE58_RS22520 IPR007730 Sporulation-like domain DOE58_RS22520 IPR036680 Sporulation-like domain superfamily DOE58_RS22525 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS22525 IPR022281 ATP-dependent protease, HslV subunit DOE58_RS22525 IPR023333 Proteasome B-type subunit DOE58_RS22525 IPR001353 Proteasome, subunit alpha/beta DOE58_RS22530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22530 IPR003593 AAA+ ATPase domain DOE58_RS22530 IPR004491 Heat shock protein HslU DOE58_RS22530 IPR019489 Clp ATPase, C-terminal DOE58_RS22530 IPR003959 ATPase, AAA-type, core DOE58_RS22535 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase DOE58_RS22535 IPR000537 UbiA prenyltransferase family DOE58_RS22535 IPR026046 UbiA prenyltransferase domain containing protein 1 DOE58_RS22540 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DOE58_RS22540 IPR010203 Regulator of ribonuclease activity A DOE58_RS22540 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria DOE58_RS22540 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DOE58_RS22545 IPR009252 Cell division protein ZapB DOE58_RS22550 IPR022357 Major intrinsic protein, conserved site DOE58_RS22550 IPR000425 Major intrinsic protein DOE58_RS22550 IPR023271 Aquaporin-like DOE58_RS22555 IPR000577 Carbohydrate kinase, FGGY DOE58_RS22555 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS22555 IPR018483 Carbohydrate kinase, FGGY, conserved site DOE58_RS22555 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS22555 IPR005999 Glycerol kinase DOE58_RS22560 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase DOE58_RS22565 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS22565 IPR033892 Ferredoxin--NADP reductase, bacteria DOE58_RS22565 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS22565 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE58_RS22565 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS22565 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS22570 IPR008523 Protein of unknown function DUF805 DOE58_RS22575 IPR009918 Protein of unknown function DUF1454 DOE58_RS22580 IPR020861 Triosephosphate isomerase, active site DOE58_RS22580 IPR000652 Triosephosphate isomerase DOE58_RS22580 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DOE58_RS22580 IPR013785 Aldolase-type TIM barrel DOE58_RS22580 IPR035990 Triosephosphate isomerase superfamily DOE58_RS22585 IPR011060 Ribulose-phosphate binding barrel DOE58_RS22585 IPR000056 Ribulose-phosphate 3-epimerase-like DOE58_RS22585 IPR013785 Aldolase-type TIM barrel DOE58_RS22590 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE58_RS22590 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase DOE58_RS22590 IPR011008 Dimeric alpha-beta barrel DOE58_RS22595 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase DOE58_RS22595 IPR013785 Aldolase-type TIM barrel DOE58_RS22595 IPR002915 DeoC/FbaB/ lacD aldolase DOE58_RS22595 IPR041720 Aldolase FbaB-like, archaeal-type DOE58_RS22600 IPR025997 Periplasmic binding protein DOE58_RS22600 IPR028082 Periplasmic binding protein-like I DOE58_RS22600 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB DOE58_RS22605 IPR001851 ABC transporter, permease DOE58_RS22610 IPR001851 ABC transporter, permease DOE58_RS22615 IPR017871 ABC transporter, conserved site DOE58_RS22615 IPR003439 ABC transporter-like DOE58_RS22615 IPR003593 AAA+ ATPase domain DOE58_RS22615 IPR030281 Autoinducer 2 import ATP-binding protein LsrA DOE58_RS22615 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS22620 IPR037171 NagB/RpiA transferase-like DOE58_RS22620 IPR007324 Sugar-binding domain, putative DOE58_RS22620 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22625 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS22625 IPR033676 Autoinducer-2 kinase DOE58_RS22625 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS22625 IPR000577 Carbohydrate kinase, FGGY DOE58_RS22635 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial DOE58_RS22635 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily DOE58_RS22635 IPR003763 CDP-diacylglycerol pyrophosphatase DOE58_RS22635 IPR036265 HIT-like superfamily DOE58_RS22645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS22645 IPR000524 Transcription regulator HTH, GntR DOE58_RS22645 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS22645 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22645 IPR004839 Aminotransferase, class I/classII DOE58_RS22645 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS22645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS22655 IPR029056 Ribokinase-like DOE58_RS22655 IPR011611 Carbohydrate kinase PfkB DOE58_RS22655 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS22655 IPR002139 Ribokinase/fructokinase DOE58_RS22660 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS22660 IPR001927 Sodium:galactoside symporter DOE58_RS22660 IPR036259 MFS transporter superfamily DOE58_RS22660 IPR039672 Lactose permease-like DOE58_RS22665 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial DOE58_RS22665 IPR036265 HIT-like superfamily DOE58_RS22665 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily DOE58_RS22665 IPR003763 CDP-diacylglycerol pyrophosphatase DOE58_RS22670 IPR034408 Sulphate/thiosulphate-binding site DOE58_RS22670 IPR000957 Sulphate/thiosulphate-binding, conserved site DOE58_RS22670 IPR005669 Thiosulphate/Sulfate-binding protein DOE58_RS22675 IPR015912 Phosphofructokinase, conserved site DOE58_RS22675 IPR035966 Phosphofructokinase superfamily DOE58_RS22675 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type DOE58_RS22675 IPR022953 ATP-dependent 6-phosphofructokinase DOE58_RS22675 IPR000023 Phosphofructokinase domain DOE58_RS22675 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic DOE58_RS22680 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DOE58_RS22680 IPR027469 Cation efflux transmembrane domain superfamily DOE58_RS22680 IPR027470 Cation efflux protein, cytoplasmic domain DOE58_RS22680 IPR023783 Cation efflux pump FieF DOE58_RS22680 IPR002524 Cation efflux protein DOE58_RS22700 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly DOE58_RS22705 IPR037053 Phage tail collar domain superfamily DOE58_RS22705 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 DOE58_RS22705 IPR011083 Phage tail collar domain DOE58_RS22805 IPR006430 Phage portal protein PBSX family DOE58_RS22805 IPR030935 Phage portal protein PBSX family, Proteobacteria DOE58_RS22820 IPR008766 Replication gene A protein DOE58_RS22860 IPR011931 Tyrosine recombinase XerC DOE58_RS22860 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS22860 IPR023009 Tyrosine recombinase XerC/XerD DOE58_RS22860 IPR010998 Integrase/recombinase, N-terminal DOE58_RS22860 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS22860 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS22860 IPR002104 Integrase, catalytic domain DOE58_RS22865 IPR012899 LTXXQ motif family protein DOE58_RS22870 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS22870 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS22870 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS22870 IPR011006 CheY-like superfamily DOE58_RS22870 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS22875 IPR032404 Two-component sensor protein CpxA, periplasmic domain DOE58_RS22875 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS22875 IPR038515 CpxA, periplasmic domain superfamily DOE58_RS22875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS22875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS22875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS22875 IPR005467 Histidine kinase domain DOE58_RS22875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS22875 IPR003660 HAMP domain DOE58_RS22885 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE58_RS22885 IPR005163 3-alpha domain DOE58_RS22885 IPR005302 Molybdenum cofactor sulfurase, C-terminal DOE58_RS22890 IPR019832 Manganese/iron superoxide dismutase, C-terminal DOE58_RS22890 IPR001189 Manganese/iron superoxide dismutase DOE58_RS22890 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DOE58_RS22890 IPR019833 Manganese/iron superoxide dismutase, binding site DOE58_RS22890 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DOE58_RS22890 IPR019831 Manganese/iron superoxide dismutase, N-terminal DOE58_RS22895 IPR018389 TRAP transporter solute receptor DctP/TeaA DOE58_RS22895 IPR004682 TRAP transporter solute receptor, DctP family DOE58_RS22895 IPR038404 TRAP transporter solute receptor DctP superfamily DOE58_RS22900 IPR007387 TRAP transporter, small membrane protein DctQ DOE58_RS22905 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE58_RS22905 IPR004681 TRAP transporter large membrane protein DctM DOE58_RS22910 IPR009331 Oligogalacturonate-specific porin DOE58_RS22915 IPR004673 L-rhamnose-proton symport, RhaT DOE58_RS22920 IPR023699 Transcription activator HTH, RhaR DOE58_RS22920 IPR011051 RmlC-like cupin domain superfamily DOE58_RS22920 IPR014710 RmlC-like jelly roll fold DOE58_RS22920 IPR018062 HTH domain AraC-type, conserved site DOE58_RS22920 IPR009057 Homeobox-like domain superfamily DOE58_RS22920 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS22920 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS22920 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS22930 IPR018062 HTH domain AraC-type, conserved site DOE58_RS22930 IPR003313 AraC-type arabinose-binding/dimerisation domain DOE58_RS22930 IPR037923 Transcription regulator HTH-like DOE58_RS22930 IPR018060 DNA binding HTH domain, AraC-type DOE58_RS22930 IPR014710 RmlC-like jelly roll fold DOE58_RS22930 IPR020449 Transcription regulator HTH, AraC- type DOE58_RS22930 IPR023609 Transcription regulator HTH, RhaS DOE58_RS22930 IPR009057 Homeobox-like domain superfamily DOE58_RS22935 IPR018484 Carbohydrate kinase, FGGY, N-terminal DOE58_RS22935 IPR018485 Carbohydrate kinase, FGGY, C-terminal DOE58_RS22935 IPR013449 Rhamnulokinase DOE58_RS22940 IPR009308 Rhamnose isomerase DOE58_RS22940 IPR036237 Xylose isomerase-like superfamily DOE58_RS22945 IPR013447 Rhamnulose-1-phosphate aldolase DOE58_RS22945 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE58_RS22945 IPR001303 Class II aldolase/adducin N-terminal DOE58_RS22950 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DOE58_RS22950 IPR039697 Iron-type alcohol dehydrogenase-like DOE58_RS22950 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DOE58_RS22955 IPR013448 L-rhamnose mutarotase DOE58_RS22955 IPR008000 Rhamnose/fucose mutarotase DOE58_RS22955 IPR011008 Dimeric alpha-beta barrel DOE58_RS22965 IPR004471 Branched-chain amino acid transport, AzlC DOE58_RS22965 IPR011606 Branched-chain amino acid transport, permease DOE58_RS22975 IPR024291 Protein of unknown function DUF3829 DOE58_RS22980 IPR003786 Sulfur carrier protein FdhD DOE58_RS22980 IPR016193 Cytidine deaminase-like DOE58_RS22985 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS22985 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS22985 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS22985 IPR006443 Formate dehydrogenase-N, alpha subunit DOE58_RS22985 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS22985 IPR006656 Molybdopterin oxidoreductase DOE58_RS22985 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS22985 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS22990 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DOE58_RS22990 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DOE58_RS22990 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DOE58_RS22990 IPR006656 Molybdopterin oxidoreductase DOE58_RS22990 IPR006657 Molybdopterin dinucleotide-binding domain DOE58_RS22990 IPR006443 Formate dehydrogenase-N, alpha subunit DOE58_RS22990 IPR006311 Twin-arginine translocation pathway, signal sequence DOE58_RS22990 IPR009010 Aspartate decarboxylase-like domain superfamily DOE58_RS22995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE58_RS22995 IPR014603 Formate dehydrogenase iron-sulphur subunit DOE58_RS22995 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DOE58_RS22995 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria DOE58_RS22995 IPR015246 Formate dehydrogenase, transmembrane DOE58_RS22995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE58_RS23000 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DOE58_RS23000 IPR006471 Formate dehydrogenase, gamma subunit DOE58_RS23000 IPR016174 Di-haem cytochrome, transmembrane DOE58_RS23005 IPR024064 FdhE-like superfamily DOE58_RS23005 IPR006452 Formate dehydrogenase accessory protein DOE58_RS23015 IPR009387 Toxin HigB-2 DOE58_RS23020 IPR013094 Alpha/beta hydrolase fold-3 DOE58_RS23020 IPR029058 Alpha/Beta hydrolase fold DOE58_RS23025 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative DOE58_RS23030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS23030 IPR001387 Cro/C1-type helix-turn-helix domain DOE58_RS23030 IPR039060 Antitoxin HigA DOE58_RS23035 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS23035 IPR012660 Thioesterase, putative DOE58_RS23035 IPR029069 HotDog domain superfamily DOE58_RS23035 IPR000182 GNAT domain DOE58_RS23040 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DOE58_RS23040 IPR003732 D-aminoacyl-tRNA deacylase DTD DOE58_RS23045 IPR023679 Uncharacterised protein family UPF0761, bacterial DOE58_RS23045 IPR017039 Virulence factor BrkB DOE58_RS23050 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS23050 IPR036412 HAD-like superfamily DOE58_RS23050 IPR006439 HAD hydrolase, subfamily IA DOE58_RS23050 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS23050 IPR023214 HAD superfamily DOE58_RS23055 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23055 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23055 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS23055 IPR014036 DeoR C-terminal sensor domain DOE58_RS23055 IPR001034 DeoR-type HTH domain DOE58_RS23055 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DOE58_RS23055 IPR037171 NagB/RpiA transferase-like DOE58_RS23060 IPR029056 Ribokinase-like DOE58_RS23060 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS23060 IPR011611 Carbohydrate kinase PfkB DOE58_RS23060 IPR030877 Sulfofructose kinase DOE58_RS23060 IPR002139 Ribokinase/fructokinase DOE58_RS23065 IPR030876 3-sulfolactaldehyde reductase DOE58_RS23065 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS23065 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DOE58_RS23065 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DOE58_RS23065 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DOE58_RS23065 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23065 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DOE58_RS23065 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS23070 IPR013785 Aldolase-type TIM barrel DOE58_RS23070 IPR002915 DeoC/FbaB/ lacD aldolase DOE58_RS23070 IPR017291 Sulfofructosephosphate aldolase, YihT DOE58_RS23075 IPR008928 Six-hairpin glycosidase superfamily DOE58_RS23075 IPR012341 Six-hairpin glycosidase-like superfamily DOE58_RS23075 IPR034116 AGE domain DOE58_RS23075 IPR030875 Sulfoquinovose isomerase DOE58_RS23080 IPR014718 Glycoside hydrolase-type carbohydrate-binding DOE58_RS23080 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS23080 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DOE58_RS23080 IPR037480 YihR-like DOE58_RS23085 IPR017853 Glycoside hydrolase superfamily DOE58_RS23085 IPR013780 Glycosyl hydrolase, all-beta DOE58_RS23085 IPR011013 Galactose mutarotase-like domain superfamily DOE58_RS23085 IPR000322 Glycoside hydrolase family 31 DOE58_RS23090 IPR001927 Sodium:galactoside symporter DOE58_RS23090 IPR039672 Lactose permease-like DOE58_RS23090 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS23090 IPR036259 MFS transporter superfamily DOE58_RS23095 IPR018043 Sodium:galactoside symporter, conserved site DOE58_RS23095 IPR001927 Sodium:galactoside symporter DOE58_RS23095 IPR036259 MFS transporter superfamily DOE58_RS23095 IPR039672 Lactose permease-like DOE58_RS23100 IPR009331 Oligogalacturonate-specific porin DOE58_RS23105 IPR000795 Transcription factor, GTP-binding domain DOE58_RS23105 IPR005225 Small GTP-binding protein domain DOE58_RS23105 IPR035647 EF-G domain III/V-like DOE58_RS23105 IPR000640 Elongation factor EFG, domain V-like DOE58_RS23105 IPR004161 Translation elongation factor EFTu-like, domain 2 DOE58_RS23105 IPR031157 Tr-type G domain, conserved site DOE58_RS23105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23105 IPR035651 BipA, domain V DOE58_RS23105 IPR006298 GTP-binding protein TypA DOE58_RS23105 IPR009000 Translation protein, beta-barrel domain superfamily DOE58_RS23105 IPR042116 GTP-binding protein TypA/BipA, C-terminal DOE58_RS23115 IPR036651 Glutamine synthetase, N-terminal domain superfamily DOE58_RS23115 IPR008147 Glutamine synthetase, beta-Grasp domain DOE58_RS23115 IPR027303 Glutamine synthetase, glycine-rich site DOE58_RS23115 IPR004809 Glutamine synthetase type I DOE58_RS23115 IPR001637 Glutamine synthetase class-I, adenylation site DOE58_RS23115 IPR027302 Glutamine synthetase, N-terminal conserved site DOE58_RS23115 IPR008146 Glutamine synthetase, catalytic domain DOE58_RS23115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DOE58_RS23125 IPR035965 PAS domain superfamily DOE58_RS23125 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS23125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS23125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS23125 IPR005467 Histidine kinase domain DOE58_RS23125 IPR000014 PAS domain DOE58_RS23125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS23125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS23125 IPR013767 PAS fold DOE58_RS23130 IPR025944 Sigma-54 interaction domain, conserved site DOE58_RS23130 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS23130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23130 IPR002078 RNA polymerase sigma factor 54 interaction domain DOE58_RS23130 IPR002197 DNA binding HTH domain, Fis-type DOE58_RS23130 IPR009057 Homeobox-like domain superfamily DOE58_RS23130 IPR011006 CheY-like superfamily DOE58_RS23130 IPR003593 AAA+ ATPase domain DOE58_RS23130 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE58_RS23130 IPR010114 DNA-binding transcriptional regulator NtrC DOE58_RS23130 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS23140 IPR010723 HemN, C-terminal DOE58_RS23140 IPR023404 Radical SAM, alpha/beta horseshoe DOE58_RS23140 IPR007197 Radical SAM DOE58_RS23140 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN DOE58_RS23140 IPR034505 Anaerobic coproporphyrinogen-III oxidase DOE58_RS23140 IPR006638 Elp3/MiaB/NifB DOE58_RS23145 IPR007336 Der GTPase activator DOE58_RS23155 IPR006073 GTP binding domain DOE58_RS23155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23155 IPR030393 EngB-type guanine nucleotide-binding (G) domain DOE58_RS23155 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DOE58_RS23165 IPR008918 Helix-hairpin-helix motif, class 2 DOE58_RS23165 IPR036397 Ribonuclease H superfamily DOE58_RS23165 IPR029060 PIN-like domain superfamily DOE58_RS23165 IPR002562 3'-5' exonuclease domain DOE58_RS23165 IPR002298 DNA polymerase A DOE58_RS23165 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DOE58_RS23165 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE58_RS23165 IPR019760 DNA-directed DNA polymerase, family A, conserved site DOE58_RS23165 IPR001098 DNA-directed DNA polymerase, family A, palm domain DOE58_RS23165 IPR020045 DNA polymerase I-like, H3TH domain DOE58_RS23165 IPR018320 DNA polymerase 1 DOE58_RS23165 IPR012337 Ribonuclease H-like superfamily DOE58_RS23165 IPR002421 5'-3' exonuclease, N-terminal DOE58_RS23175 IPR002123 Phospholipid/glycerol acyltransferase DOE58_RS23180 IPR017937 Thioredoxin, conserved site DOE58_RS23180 IPR036249 Thioredoxin-like superfamily DOE58_RS23180 IPR013766 Thioredoxin domain DOE58_RS23180 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DOE58_RS23180 IPR001853 DSBA-like thioredoxin domain DOE58_RS23185 IPR002575 Aminoglycoside phosphotransferase DOE58_RS23185 IPR011009 Protein kinase-like domain superfamily DOE58_RS23185 IPR032882 SrkA/RdoA protein kinase DOE58_RS23190 IPR009383 Protein of unknown function DUF1040 DOE58_RS23190 IPR038134 YihD-like superfamily DOE58_RS23195 IPR013482 Molybdenum cofactor guanylyltransferase DOE58_RS23195 IPR025877 MobA-like NTP transferase DOE58_RS23195 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS23200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23200 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain DOE58_RS23230 IPR029039 Flavoprotein-like superfamily DOE58_RS23230 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS23230 IPR001226 Flavodoxin, conserved site DOE58_RS23230 IPR026816 Flavodoxin domain DOE58_RS23235 IPR004772 TrkH potassium transport family DOE58_RS23235 IPR003445 Cation transporter DOE58_RS23240 IPR035647 EF-G domain III/V-like DOE58_RS23240 IPR023582 Impact family DOE58_RS23240 IPR015796 Impact family, bacterial/archaeal DOE58_RS23240 IPR001498 Impact, N-terminal DOE58_RS23240 IPR036956 Impact, N-terminal domain superfamily DOE58_RS23240 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS23240 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DOE58_RS23240 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DOE58_RS23245 IPR022846 Xaa-Pro dipeptidase DOE58_RS23245 IPR000994 Peptidase M24 DOE58_RS23245 IPR036005 Creatinase/aminopeptidase-like DOE58_RS23245 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE58_RS23245 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE58_RS23250 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS23250 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23250 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DOE58_RS23250 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DOE58_RS23250 IPR029045 ClpP/crotonase-like domain superfamily DOE58_RS23250 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DOE58_RS23250 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DOE58_RS23250 IPR012799 Fatty oxidation complex, alpha subunit FadB DOE58_RS23250 IPR001753 Enoyl-CoA hydratase/isomerase DOE58_RS23255 IPR020617 Thiolase, C-terminal DOE58_RS23255 IPR020613 Thiolase, conserved site DOE58_RS23255 IPR020616 Thiolase, N-terminal DOE58_RS23255 IPR020615 Thiolase, acyl-enzyme intermediate active site DOE58_RS23255 IPR012805 Acetyl-CoA C-acyltransferase FadA DOE58_RS23255 IPR016039 Thiolase-like DOE58_RS23255 IPR020610 Thiolase, active site DOE58_RS23255 IPR002155 Thiolase DOE58_RS23260 IPR038477 Arylsulfotransferase, N-terminal domain superfamily DOE58_RS23260 IPR035391 Arylsulfotransferase, Ig-like domain DOE58_RS23260 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria DOE58_RS23260 IPR010262 Arylsulfotransferase, bacteria DOE58_RS23265 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE58_RS23265 IPR017927 FAD-binding domain, ferredoxin reductase-type DOE58_RS23265 IPR017938 Riboflavin synthase-like beta-barrel DOE58_RS23265 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DOE58_RS23265 IPR001433 Oxidoreductase FAD/NAD(P)-binding DOE58_RS23270 IPR023677 UbiD decarboxylyase, bacteria DOE58_RS23270 IPR002830 UbiD decarboxylyase family DOE58_RS23275 IPR006645 NusG, N-terminal DOE58_RS23275 IPR010215 Transcription antitermination protein RfaH DOE58_RS23275 IPR036735 NusG, N-terminal domain superfamily DOE58_RS23280 IPR001130 TatD family DOE58_RS23280 IPR024918 3'-5' ssDNA/RNA exonuclease TatD DOE58_RS23280 IPR032466 Metal-dependent hydrolase DOE58_RS23280 IPR018228 Deoxyribonuclease, TatD-related, conserved site DOE58_RS23285 IPR002033 Sec-independent periplasmic protein translocase TatC DOE58_RS23285 IPR019820 Sec-independent periplasmic protein translocase, conserved site DOE58_RS23290 IPR018448 Twin-arginine translocation protein TatB DOE58_RS23295 IPR003369 Sec-independent protein translocase protein TatA/B/E DOE58_RS23295 IPR006312 Sec-independent protein translocase protein TatA/E DOE58_RS23300 IPR010232 Probable protein kinase UbiB DOE58_RS23300 IPR004147 UbiB domain DOE58_RS23300 IPR011009 Protein kinase-like domain superfamily DOE58_RS23305 IPR038989 Ubiquinone biosynthesis protein UbiJ DOE58_RS23305 IPR036527 SCP2 sterol-binding domain superfamily DOE58_RS23305 IPR003033 SCP2 sterol-binding domain DOE58_RS23310 IPR023576 UbiE/COQ5 methyltransferase, conserved site DOE58_RS23310 IPR004033 UbiE/COQ5 methyltransferase DOE58_RS23310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS23315 IPR003798 DNA recombination RmuC DOE58_RS23320 IPR010058 Uridine phosphorylase DOE58_RS23320 IPR018016 Nucleoside phosphorylase, conserved site DOE58_RS23320 IPR000845 Nucleoside phosphorylase domain DOE58_RS23320 IPR035994 Nucleoside phosphorylase superfamily DOE58_RS23325 IPR002925 Dienelactone hydrolase DOE58_RS23325 IPR029058 Alpha/Beta hydrolase fold DOE58_RS23330 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme DOE58_RS23330 IPR013785 Aldolase-type TIM barrel DOE58_RS23330 IPR007197 Radical SAM DOE58_RS23330 IPR023885 4Fe4S-binding SPASM domain DOE58_RS23335 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DOE58_RS23335 IPR006276 Cobalamin-independent methionine synthase DOE58_RS23335 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DOE58_RS23335 IPR038071 UROD/MetE-like superfamily DOE58_RS23340 IPR005119 LysR, substrate-binding DOE58_RS23340 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23340 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain DOE58_RS23340 IPR000847 Transcription regulator HTH, LysR DOE58_RS23340 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23345 IPR000620 EamA domain DOE58_RS23345 IPR004779 Carboxylate/Amino Acid/Amine Transporter DOE58_RS23350 IPR036412 HAD-like superfamily DOE58_RS23350 IPR006379 HAD-superfamily hydrolase, subfamily IIB DOE58_RS23350 IPR023214 HAD superfamily DOE58_RS23350 IPR000150 Cof family DOE58_RS23355 IPR029058 Alpha/Beta hydrolase fold DOE58_RS23355 IPR022742 Serine aminopeptidase, S33 DOE58_RS23360 IPR004778 Homoserine/Threonine efflux protein DOE58_RS23360 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS23365 IPR004778 Homoserine/Threonine efflux protein DOE58_RS23365 IPR001123 Amino acid exporter protein, LeuE-type DOE58_RS23370 IPR010997 HRDC-like superfamily DOE58_RS23370 IPR002121 HRDC domain DOE58_RS23370 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23370 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DOE58_RS23370 IPR018982 RQC domain DOE58_RS23370 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23370 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DOE58_RS23370 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS23370 IPR011545 DEAD/DEAH box helicase domain DOE58_RS23370 IPR001650 Helicase, C-terminal DOE58_RS23370 IPR004589 DNA helicase, ATP-dependent, RecQ type DOE58_RS23375 IPR036541 Phospholipase A1 superfamily DOE58_RS23375 IPR003187 Phospholipase A1 DOE58_RS23380 IPR029069 HotDog domain superfamily DOE58_RS23380 IPR003736 Phenylacetic acid degradation-related domain DOE58_RS23380 IPR006683 Thioesterase domain DOE58_RS23385 IPR004626 RarD protein DOE58_RS23385 IPR000620 EamA domain DOE58_RS23400 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DOE58_RS23400 IPR004488 Magnesium/cobalt transport protein CorA DOE58_RS23410 IPR034739 UvrD/AddA helicase, N-terminal DOE58_RS23410 IPR014016 UvrD-like helicase, ATP-binding domain DOE58_RS23410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23410 IPR014017 UvrD-like DNA helicase, C-terminal DOE58_RS23410 IPR000212 DNA helicase, UvrD/REP type DOE58_RS23410 IPR013986 DExx box DNA helicase domain superfamily DOE58_RS23410 IPR005753 DNA helicase, ATP-dependent, UvrD type DOE58_RS23415 IPR036412 HAD-like superfamily DOE58_RS23415 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS23415 IPR023214 HAD superfamily DOE58_RS23415 IPR006439 HAD hydrolase, subfamily IA DOE58_RS23420 IPR011931 Tyrosine recombinase XerC DOE58_RS23420 IPR004107 Integrase, SAM-like, N-terminal DOE58_RS23420 IPR023009 Tyrosine recombinase XerC/XerD DOE58_RS23420 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS23420 IPR002104 Integrase, catalytic domain DOE58_RS23420 IPR010998 Integrase/recombinase, N-terminal DOE58_RS23420 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS23425 IPR007435 Protein of unknown function DUF484 DOE58_RS23425 IPR029016 GAF-like domain superfamily DOE58_RS23430 IPR001653 Diaminopimelate epimerase, DapF DOE58_RS23430 IPR018510 Diaminopimelate epimerase, active site DOE58_RS23435 IPR032831 Prokaryotic lipoprotein-attachment site DOE58_RS23450 IPR002908 Frataxin/CyaY DOE58_RS23450 IPR036524 Frataxin/CyaY superfamily DOE58_RS23450 IPR020895 Frataxin conserved site DOE58_RS23455 IPR000274 Adenylate cyclase, class-I DOE58_RS23455 IPR024686 Adenylate cyclase class-I, conserved site DOE58_RS23455 IPR024685 Adenylate cyclase class-I, N-terminal domain DOE58_RS23460 IPR022418 Porphobilinogen deaminase, C-terminal DOE58_RS23460 IPR022417 Porphobilinogen deaminase, N-terminal DOE58_RS23460 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DOE58_RS23460 IPR000860 Porphobilinogen deaminase DOE58_RS23460 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DOE58_RS23465 IPR039793 Uroporphyrinogen-III synthase DOE58_RS23465 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase DOE58_RS23465 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily DOE58_RS23470 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DOE58_RS23475 IPR013105 Tetratricopeptide repeat 2 DOE58_RS23475 IPR005254 Heme biosynthesis-associated TPR protein DOE58_RS23475 IPR010817 HemY, N-terminal DOE58_RS23475 IPR013026 Tetratricopeptide repeat-containing domain DOE58_RS23475 IPR011990 Tetratricopeptide-like helical domain superfamily DOE58_RS23475 IPR019734 Tetratricopeptide repeat DOE58_RS23500 IPR004840 Amino acid permease, conserved site DOE58_RS23500 IPR004841 Amino acid permease/ SLC12A domain DOE58_RS23505 IPR004629 Glycosyl transferase WecB/TagA/CpsF DOE58_RS23505 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase DOE58_RS23510 IPR010691 Probable ECA polymerase WzyE DOE58_RS23515 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase DOE58_RS23520 IPR002797 Polysaccharide biosynthesis protein DOE58_RS23520 IPR032896 Lipid III flippase WzxE DOE58_RS23525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DOE58_RS23525 IPR015424 Pyridoxal phosphate-dependent transferase DOE58_RS23525 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE58_RS23525 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like DOE58_RS23525 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE DOE58_RS23525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DOE58_RS23530 IPR002110 Ankyrin repeat DOE58_RS23530 IPR016181 Acyl-CoA N-acyltransferase DOE58_RS23530 IPR012752 dTDP-fucosamine acetyltransferase WecD DOE58_RS23530 IPR020683 Ankyrin repeat-containing domain DOE58_RS23530 IPR000182 GNAT domain DOE58_RS23535 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOE58_RS23535 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS23535 IPR005835 Nucleotidyl transferase domain DOE58_RS23535 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DOE58_RS23535 IPR005835 Nucleotidyl transferase domain DOE58_RS23535 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS23540 IPR016040 NAD(P)-binding domain DOE58_RS23540 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23540 IPR005888 dTDP-glucose 4,6-dehydratase DOE58_RS23545 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DOE58_RS23545 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DOE58_RS23545 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DOE58_RS23545 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase DOE58_RS23545 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC DOE58_RS23545 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DOE58_RS23545 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS23545 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DOE58_RS23550 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain DOE58_RS23550 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like DOE58_RS23550 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB DOE58_RS23555 IPR032895 ECA polysaccharide chain length modulation protein WzzE DOE58_RS23555 IPR003856 Polysaccharide chain length determinant N-terminal domain DOE58_RS23560 IPR000715 Glycosyl transferase, family 4 DOE58_RS23560 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase DOE58_RS23565 IPR011113 Rho termination factor, RNA-binding domain DOE58_RS23565 IPR004665 Transcription termination factor Rho DOE58_RS23565 IPR036269 Rho termination factor, N-terminal domain superfamily DOE58_RS23565 IPR011112 Rho termination factor, N-terminal DOE58_RS23565 IPR041703 Transcription termination factor Rho, ATP binding domain DOE58_RS23565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23565 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS23565 IPR011129 Cold shock domain DOE58_RS23565 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS23565 IPR003593 AAA+ ATPase domain DOE58_RS23575 IPR036249 Thioredoxin-like superfamily DOE58_RS23575 IPR017937 Thioredoxin, conserved site DOE58_RS23575 IPR005746 Thioredoxin DOE58_RS23575 IPR013766 Thioredoxin domain DOE58_RS23580 IPR001650 Helicase, C-terminal DOE58_RS23580 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE58_RS23580 IPR011545 DEAD/DEAH box helicase domain DOE58_RS23580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23580 IPR014014 RNA helicase, DEAD-box type, Q motif DOE58_RS23580 IPR023554 ATP-dependent RNA helicase RhlB type DOE58_RS23580 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE58_RS23590 IPR030673 Pyrophosphatase, GppA/Ppx-type DOE58_RS23590 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase DOE58_RS23590 IPR003695 Ppx/GppA phosphatase DOE58_RS23595 IPR014016 UvrD-like helicase, ATP-binding domain DOE58_RS23595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23595 IPR034739 UvrD/AddA helicase, N-terminal DOE58_RS23595 IPR005752 ATP-dependent DNA helicase Rep DOE58_RS23595 IPR000212 DNA helicase, UvrD/REP type DOE58_RS23595 IPR014017 UvrD-like DNA helicase, C-terminal DOE58_RS23595 IPR013986 DExx box DNA helicase domain superfamily DOE58_RS23610 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DOE58_RS23610 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DOE58_RS23615 IPR013023 Ketol-acid reductoisomerase DOE58_RS23615 IPR000506 Ketol-acid reductoisomerase, C-terminal DOE58_RS23615 IPR013116 Ketol-acid reductoisomerase, N-terminal DOE58_RS23615 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23615 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DOE58_RS23615 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DOE58_RS23620 IPR000847 Transcription regulator HTH, LysR DOE58_RS23620 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23620 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23620 IPR005119 LysR, substrate-binding DOE58_RS23620 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain DOE58_RS23635 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE58_RS23635 IPR001926 Pyridoxal-phosphate dependent enzyme DOE58_RS23635 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DOE58_RS23635 IPR001721 Threonine dehydratase, ACT-like domain DOE58_RS23635 IPR038110 Threonine dehydratase, ACT-like domain superfamily DOE58_RS23635 IPR005787 Threonine dehydratase, biosynthetic DOE58_RS23640 IPR042096 Dihydroxy-acid dehydratase, C-terminal DOE58_RS23640 IPR004404 Dihydroxy-acid dehydratase DOE58_RS23640 IPR037237 IlvD/EDD, N-terminal domain DOE58_RS23640 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DOE58_RS23640 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DOE58_RS23645 IPR001544 Aminotransferase class IV DOE58_RS23645 IPR033939 Branched-chain aminotransferase DOE58_RS23645 IPR005785 Branched-chain amino acid aminotransferase I DOE58_RS23645 IPR036038 Aminotransferase-like, PLP-dependent enzymes DOE58_RS23645 IPR018300 Aminotransferase, class IV, conserved site DOE58_RS23650 IPR002912 ACT domain DOE58_RS23655 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DOE58_RS23655 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DOE58_RS23655 IPR012000 Thiamine pyrophosphate enzyme, central domain DOE58_RS23655 IPR029061 Thiamin diphosphate-binding fold DOE58_RS23655 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE58_RS23655 IPR039368 Acetolactate synthase large subunit, TPP binding domain DOE58_RS23655 IPR000399 TPP-binding enzyme, conserved site DOE58_RS23655 IPR012846 Acetolactate synthase, large subunit, biosynthetic DOE58_RS23660 IPR012567 IlvGEDA operon leader peptide DOE58_RS23665 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE58_RS23665 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS23665 IPR003593 AAA+ ATPase domain DOE58_RS23665 IPR025158 Mg chelatase-related protein, C-terminal domain DOE58_RS23665 IPR000523 Magnesium chelatase ChlI domain DOE58_RS23665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23665 IPR004482 Mg chelatase-related protein DOE58_RS23670 IPR007335 Protein of unknown function DUF413 DOE58_RS23675 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23675 IPR000847 Transcription regulator HTH, LysR DOE58_RS23675 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23675 IPR005119 LysR, substrate-binding DOE58_RS23675 IPR020890 Transcription regulator HTH, HdfR DOE58_RS23710 IPR011711 GntR, C-terminal DOE58_RS23710 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE58_RS23710 IPR000524 Transcription regulator HTH, GntR DOE58_RS23710 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23710 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23715 IPR004638 Drug resistance transporter EmrB-like DOE58_RS23715 IPR011701 Major facilitator superfamily DOE58_RS23715 IPR020846 Major facilitator superfamily domain DOE58_RS23715 IPR036259 MFS transporter superfamily DOE58_RS23720 IPR028082 Periplasmic binding protein-like I DOE58_RS23720 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DOE58_RS23720 IPR000843 LacI-type HTH domain DOE58_RS23725 IPR029056 Ribokinase-like DOE58_RS23725 IPR002139 Ribokinase/fructokinase DOE58_RS23725 IPR011611 Carbohydrate kinase PfkB DOE58_RS23725 IPR011877 Ribokinase DOE58_RS23725 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DOE58_RS23730 IPR028082 Periplasmic binding protein-like I DOE58_RS23730 IPR025997 Periplasmic binding protein DOE58_RS23735 IPR001851 ABC transporter, permease DOE58_RS23740 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23740 IPR003439 ABC transporter-like DOE58_RS23740 IPR015861 ABC transporter, ribose import, RbsA DOE58_RS23740 IPR017871 ABC transporter, conserved site DOE58_RS23740 IPR003593 AAA+ ATPase domain DOE58_RS23745 IPR023064 D-ribose pyranase DOE58_RS23745 IPR023750 RbsD-like superfamily DOE58_RS23745 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU DOE58_RS23750 IPR003855 Potassium transporter DOE58_RS23750 IPR023051 Potassium uptake protein, low affinity, Kup DOE58_RS23755 IPR041538 ATPase RavA-like, AAA lid domain DOE58_RS23755 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23755 IPR022547 ATPase, RavA, C-terminal DOE58_RS23755 IPR023671 ATPase RavA DOE58_RS23755 IPR011704 ATPase, dynein-related, AAA domain DOE58_RS23755 IPR003593 AAA+ ATPase domain DOE58_RS23760 IPR036465 von Willebrand factor A-like domain superfamily DOE58_RS23760 IPR002035 von Willebrand factor, type A DOE58_RS23760 IPR023481 Uncharacterised protein family ViaA DOE58_RS23760 IPR008912 Uncharacterised protein family CoxE-like DOE58_RS23765 IPR004618 Aspartate--ammonia ligase DOE58_RS23765 IPR006195 Aminoacyl-tRNA synthetase, class II DOE58_RS23770 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23770 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DOE58_RS23770 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE58_RS23770 IPR019888 Transcription regulator AsnC-type DOE58_RS23770 IPR011008 Dimeric alpha-beta barrel DOE58_RS23770 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23770 IPR000485 AsnC-type HTH domain DOE58_RS23770 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS23775 IPR008254 Flavodoxin/nitric oxide synthase DOE58_RS23775 IPR029039 Flavoprotein-like superfamily DOE58_RS23785 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DOE58_RS23785 IPR026904 GidA associated domain 3 DOE58_RS23785 IPR036188 FAD/NAD(P)-binding domain superfamily DOE58_RS23785 IPR020595 MnmG-related, conserved site DOE58_RS23785 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DOE58_RS23790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS23790 IPR003682 rRNA small subunit methyltransferase G DOE58_RS23795 IPR005598 ATP synthase protein I DOE58_RS23800 IPR000568 ATP synthase, F0 complex, subunit A DOE58_RS23800 IPR023011 ATP synthase, F0 complex, subunit A, active site DOE58_RS23800 IPR035908 ATP synthase, F0 complex, subunit A superfamily DOE58_RS23805 IPR035921 F/V-ATP synthase subunit C superfamily DOE58_RS23805 IPR002379 V-ATPase proteolipid subunit C-like domain DOE58_RS23805 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DOE58_RS23805 IPR038662 F1F0 ATP synthase subunit C superfamily DOE58_RS23805 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DOE58_RS23805 IPR000454 ATP synthase, F0 complex, subunit C DOE58_RS23810 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DOE58_RS23810 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast DOE58_RS23810 IPR005864 ATP synthase, F0 complex, subunit b, bacterial DOE58_RS23815 IPR000711 ATPase, OSCP/delta subunit DOE58_RS23815 IPR020781 ATPase, OSCP/delta subunit, conserved site DOE58_RS23815 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily DOE58_RS23820 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE58_RS23820 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE58_RS23820 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DOE58_RS23820 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DOE58_RS23820 IPR000793 ATP synthase, alpha subunit, C-terminal DOE58_RS23820 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DOE58_RS23820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23820 IPR005294 ATP synthase, F1 complex, alpha subunit DOE58_RS23820 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS23820 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOE58_RS23825 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DOE58_RS23825 IPR000131 ATP synthase, F1 complex, gamma subunit DOE58_RS23825 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DOE58_RS23830 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23830 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DOE58_RS23830 IPR003593 AAA+ ATPase domain DOE58_RS23830 IPR005722 ATP synthase, F1 complex, beta subunit DOE58_RS23830 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DOE58_RS23830 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DOE58_RS23830 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DOE58_RS23830 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DOE58_RS23835 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DOE58_RS23835 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DOE58_RS23835 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DOE58_RS23835 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DOE58_RS23835 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DOE58_RS23850 IPR001451 Hexapeptide repeat DOE58_RS23850 IPR011004 Trimeric LpxA-like superfamily DOE58_RS23850 IPR029044 Nucleotide-diphospho-sugar transferases DOE58_RS23850 IPR025877 MobA-like NTP transferase DOE58_RS23850 IPR018357 Hexapeptide transferase, conserved site DOE58_RS23850 IPR038009 GlmU, C-terminal LbH domain DOE58_RS23850 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DOE58_RS23855 IPR017932 Glutamine amidotransferase type 2 domain DOE58_RS23855 IPR001347 Sugar isomerase (SIS) DOE58_RS23855 IPR035466 GlmS/AgaS, SIS domain 1 DOE58_RS23855 IPR029055 Nucleophile aminohydrolases, N-terminal DOE58_RS23855 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DOE58_RS23855 IPR035490 GlmS/FrlB, SIS domain 2 DOE58_RS23860 IPR000914 Solute-binding protein family 5 domain DOE58_RS23860 IPR023767 Transcriptional regulator SgrR DOE58_RS23860 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE58_RS23860 IPR039424 Solute-binding protein family 5 DOE58_RS23865 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DOE58_RS23865 IPR036291 NAD(P)-binding domain superfamily DOE58_RS23870 IPR006327 Phosphotransferase system, fructose IIC component DOE58_RS23870 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DOE58_RS23870 IPR013014 Phosphotransferase system, EIIC component, type 2 DOE58_RS23870 IPR003352 Phosphotransferase system, EIIC DOE58_RS23870 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DOE58_RS23870 IPR013011 Phosphotransferase system, EIIB component, type 2 DOE58_RS23870 IPR036095 PTS system IIB component-like superfamily DOE58_RS23875 IPR024370 PBP domain DOE58_RS23875 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS DOE58_RS23880 IPR011864 Phosphate ABC transporter, permease protein PstC DOE58_RS23880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS23880 IPR035906 MetI-like superfamily DOE58_RS23885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DOE58_RS23885 IPR035906 MetI-like superfamily DOE58_RS23885 IPR005672 Phosphate transport system permease protein PstA DOE58_RS23890 IPR005670 Phosphate transport system permease protein 1 DOE58_RS23890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23890 IPR015850 ABC transporter, phosphate import, PstB DOE58_RS23890 IPR017871 ABC transporter, conserved site DOE58_RS23890 IPR003439 ABC transporter-like DOE58_RS23890 IPR003593 AAA+ ATPase domain DOE58_RS23895 IPR026022 PhoU domain DOE58_RS23895 IPR028366 Phosphate transport system protein PhoU DOE58_RS23895 IPR038078 PhoU-like domain superfamily DOE58_RS23900 IPR041492 Haloacid dehalogenase-like hydrolase DOE58_RS23900 IPR023214 HAD superfamily DOE58_RS23900 IPR036412 HAD-like superfamily DOE58_RS23900 IPR006439 HAD hydrolase, subfamily IA DOE58_RS23900 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE58_RS23905 IPR006043 Xanthine/uracil/vitamin C permease DOE58_RS23905 IPR026033 Azaguanine-like transporters DOE58_RS23910 IPR029039 Flavoprotein-like superfamily DOE58_RS23910 IPR005025 NADPH-dependent FMN reductase-like DOE58_RS23915 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DOE58_RS23920 IPR005119 LysR, substrate-binding DOE58_RS23920 IPR000847 Transcription regulator HTH, LysR DOE58_RS23920 IPR023746 Transcription regulator HTH, YidZ DOE58_RS23920 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS23920 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS23920 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain DOE58_RS23925 IPR020846 Major facilitator superfamily domain DOE58_RS23925 IPR011701 Major facilitator superfamily DOE58_RS23925 IPR036259 MFS transporter superfamily DOE58_RS23925 IPR023697 Multidrug resistance protein MdtL DOE58_RS23930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS23930 IPR025867 MnmE, helical domain DOE58_RS23930 IPR027368 tRNA modification GTPase MnmE domain 2 DOE58_RS23930 IPR004520 tRNA modification GTPase MnmE DOE58_RS23930 IPR005225 Small GTP-binding protein domain DOE58_RS23930 IPR018948 GTP-binding protein TrmE, N-terminal DOE58_RS23930 IPR031168 TrmE-type guanine nucleotide-binding domain DOE58_RS23930 IPR006073 GTP binding domain DOE58_RS23930 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DOE58_RS23935 IPR019998 Membrane insertase YidC DOE58_RS23935 IPR038221 YidC, periplasmic domain superfamily DOE58_RS23935 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 DOE58_RS23935 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DOE58_RS23935 IPR038210 Membrane insertase YidC, periplasmic domain DOE58_RS23935 IPR028053 Membrane insertase YidC, N-terminal DOE58_RS23940 IPR002696 Putative membrane protein insertion efficiency factor DOE58_RS23945 IPR000100 Ribonuclease P DOE58_RS23945 IPR020568 Ribosomal protein S5 domain 2-type fold DOE58_RS23945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE58_RS23945 IPR020539 Ribonuclease P, conserved site DOE58_RS23950 IPR020939 Ribosomal protein L34, conserved site DOE58_RS23950 IPR000271 Ribosomal protein L34 DOE58_RS23960 IPR003446 Plasmid replication initiation, RepA DOE58_RS23990 IPR003593 AAA+ ATPase domain DOE58_RS23990 IPR017871 ABC transporter, conserved site DOE58_RS23990 IPR003439 ABC transporter-like DOE58_RS23990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS24005 IPR022789 Antitoxin ParD DOE58_RS24005 IPR010985 Ribbon-helix-helix DOE58_RS24005 IPR038296 Antitoxin ParD superfamily DOE58_RS24020 IPR006290 Heavy metal sensor kinase DOE58_RS24020 IPR003660 HAMP domain DOE58_RS24020 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS24020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS24020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS24020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS24020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS24020 IPR005467 Histidine kinase domain DOE58_RS24025 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS24025 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS24025 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS24025 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DOE58_RS24025 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS24025 IPR011006 CheY-like superfamily DOE58_RS24045 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS24045 IPR009057 Homeobox-like domain superfamily DOE58_RS24045 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS24050 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DOE58_RS24050 IPR005829 Sugar transporter, conserved site DOE58_RS24050 IPR020846 Major facilitator superfamily domain DOE58_RS24050 IPR011701 Major facilitator superfamily DOE58_RS24050 IPR036259 MFS transporter superfamily DOE58_RS24055 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE58_RS24055 IPR001647 DNA-binding HTH domain, TetR-type DOE58_RS24055 IPR004111 Tetracycline repressor TetR, C-terminal DOE58_RS24055 IPR009057 Homeobox-like domain superfamily DOE58_RS24055 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE58_RS24055 IPR003012 Tetracycline transcriptional regulator, TetR DOE58_RS24060 IPR011991 ArsR-like helix-turn-helix domain DOE58_RS24060 IPR001845 HTH ArsR-type DNA-binding domain DOE58_RS24060 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS24060 IPR036390 Winged helix DNA-binding domain superfamily DOE58_RS24080 IPR016047 Peptidase M23 DOE58_RS24080 IPR013731 Opacity-associated protein A, N-terminal DOE58_RS24080 IPR018392 LysM domain DOE58_RS24080 IPR011055 Duplicated hybrid motif DOE58_RS24090 IPR001757 P-type ATPase DOE58_RS24090 IPR007029 YHS domain DOE58_RS24090 IPR012348 Ribonucleotide reductase-like DOE58_RS24090 IPR018303 P-type ATPase, phosphorylation site DOE58_RS24090 IPR023299 P-type ATPase, cytoplasmic domain N DOE58_RS24090 IPR008250 P-type ATPase, A domain superfamily DOE58_RS24090 IPR023298 P-type ATPase, transmembrane domain superfamily DOE58_RS24090 IPR027256 P-type ATPase, subfamily IB DOE58_RS24090 IPR011017 TRASH domain DOE58_RS24090 IPR023214 HAD superfamily DOE58_RS24090 IPR036412 HAD-like superfamily DOE58_RS24100 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DOE58_RS24100 IPR001036 Acriflavin resistance protein DOE58_RS24100 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE58_RS24105 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DOE58_RS24105 IPR006143 RND efflux pump, membrane fusion protein DOE58_RS24110 IPR021647 Copper binding periplasmic protein CusF DOE58_RS24115 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DOE58_RS24115 IPR003423 Outer membrane efflux protein DOE58_RS24125 IPR001789 Signal transduction response regulator, receiver domain DOE58_RS24125 IPR011006 CheY-like superfamily DOE58_RS24125 IPR001867 OmpR/PhoB-type DNA-binding domain DOE58_RS24125 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DOE58_RS24125 IPR016032 Signal transduction response regulator, C-terminal effector DOE58_RS24125 IPR039420 Transcriptional regulatory protein WalR-like DOE58_RS24125 IPR036388 Winged helix-like DNA-binding domain superfamily DOE58_RS24130 IPR003660 HAMP domain DOE58_RS24130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DOE58_RS24130 IPR006290 Heavy metal sensor kinase DOE58_RS24130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DOE58_RS24130 IPR005467 Histidine kinase domain DOE58_RS24130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE58_RS24130 IPR003594 Histidine kinase/HSP90-like ATPase DOE58_RS24130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DOE58_RS24150 IPR029787 Nucleotide cyclase DOE58_RS24150 IPR000160 GGDEF domain DOE58_RS24170 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS24170 IPR016423 Resolvase, Rsv DOE58_RS24170 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS24170 IPR002104 Integrase, catalytic domain DOE58_RS24185 IPR009440 Plasmid segregation protein ParM/StbA DOE58_RS24185 IPR042051 ParM-like DOE58_RS24195 IPR001126 UmuC domain DOE58_RS24195 IPR025188 Domain of unknown function DUF4113 DOE58_RS24195 IPR017961 DNA polymerase, Y-family, little finger domain DOE58_RS24195 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DOE58_RS24200 IPR039418 LexA-like DOE58_RS24200 IPR036286 LexA/Signal peptidase-like superfamily DOE58_RS24200 IPR006197 Peptidase S24, LexA-like DOE58_RS24200 IPR015927 Peptidase S24/S26A/S26B/S26C DOE58_RS24205 IPR036687 DinI-like superfamily DOE58_RS24205 IPR010391 DNA damage-inducible protein DinI-like DOE58_RS24210 IPR016388 Putative partitioning protein SopC DOE58_RS24215 IPR023136 Api92-like domain superfamily DOE58_RS24215 IPR009694 Protein of unknown function DUF1281 DOE58_RS24225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE58_RS24225 IPR001091 Restriction/modification DNA-methylase DOE58_RS24225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DOE58_RS24225 IPR002941 DNA methylase N-4/N-6 DOE58_RS24235 IPR009811 Protein of unknown function DUF1380 DOE58_RS24250 IPR004914 Antirestriction protein DOE58_RS24250 IPR042297 Antirestriction domain superfamily DOE58_RS24255 IPR009811 Protein of unknown function DUF1380 DOE58_RS24280 IPR000424 Primosome PriB/single-strand DNA-binding DOE58_RS24280 IPR012340 Nucleic acid-binding, OB-fold DOE58_RS24280 IPR011344 Single-stranded DNA-binding protein DOE58_RS24285 IPR009253 Protein of unknown function DUF905 DOE58_RS24285 IPR038612 YkfF-like domain superfamily DOE58_RS24290 IPR004437 ParB/RepB/Spo0J partition protein DOE58_RS24290 IPR003115 ParB/Sulfiredoxin DOE58_RS24290 IPR036086 ParB/Sulfiredoxin superfamily DOE58_RS24295 IPR009385 Protein PsiB DOE58_RS24295 IPR038131 Protein PsiB-like superfamily DOE58_RS24300 IPR009713 Uncharacterised protein family PsiA DOE58_RS24305 IPR021027 Transposase, putative, helix-turn-helix domain DOE58_RS24310 IPR009940 Protein of unknown function DUF1472 DOE58_RS24340 IPR006842 Transposase (putative), YhgA-like DOE58_RS24340 IPR010106 Recombination-promoting nuclease RpnA DOE58_RS24380 IPR040677 Large polyvalent protein-associated domain 7 DOE58_RS24380 IPR005094 Endonuclease relaxase, MobA/VirD2 DOE58_RS24400 IPR012337 Ribonuclease H-like superfamily DOE58_RS24400 IPR036397 Ribonuclease H superfamily DOE58_RS24400 IPR009057 Homeobox-like domain superfamily DOE58_RS24400 IPR001584 Integrase, catalytic core DOE58_RS24410 IPR025577 FlxA-like protein DOE58_RS24420 IPR013321 Arc-type ribbon-helix-helix DOE58_RS24420 IPR007337 RelB antitoxin/Antitoxin DinJ DOE58_RS24425 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DOE58_RS24425 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DOE58_RS24430 IPR000021 Hok/gef cell toxic protein DOE58_RS24430 IPR018084 Hok/gef cell toxic protein, conserved site DOE58_RS24455 IPR021027 Transposase, putative, helix-turn-helix domain DOE58_RS24455 IPR001959 Probable transposase, IS891/IS1136/IS1341 DOE58_RS24455 IPR010095 Transposase IS605, OrfB, C-terminal DOE58_RS24465 IPR016389 Exclusion-determining protein DOE58_RS24560 IPR001482 Type II/IV secretion system protein DOE58_RS24560 IPR003593 AAA+ ATPase domain DOE58_RS24560 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS24560 IPR006321 Pilus retraction protein PilT DOE58_RS24575 IPR013078 Histidine phosphatase superfamily, clade-1 DOE58_RS24575 IPR029033 Histidine phosphatase superfamily DOE58_RS24575 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase DOE58_RS24590 IPR010998 Integrase/recombinase, N-terminal DOE58_RS24590 IPR011010 DNA breaking-rejoining enzyme, catalytic core DOE58_RS24590 IPR035069 TTHA1013/TTHA0281-like DOE58_RS24590 IPR013762 Integrase-like, catalytic domain superfamily DOE58_RS24590 IPR002104 Integrase, catalytic domain DOE58_RS24595 IPR007001 Bacterial shufflon protein, N-terminal DOE58_RS24595 IPR029017 Enolase-like, N-terminal DOE58_RS24600 IPR029017 Enolase-like, N-terminal DOE58_RS24600 IPR007001 Bacterial shufflon protein, N-terminal DOE58_RS24610 IPR008258 Transglycosylase SLT domain 1 DOE58_RS24610 IPR023346 Lysozyme-like domain superfamily DOE58_RS24625 IPR001482 Type II/IV secretion system protein DOE58_RS24625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE58_RS24640 IPR004846 Type II/III secretion system DOE58_RS24640 IPR011514 Secretin, N-terminal DOE58_RS24710 IPR005094 Endonuclease relaxase, MobA/VirD2 DOE58_RS24740 IPR000769 Regulatory protein Rop DOE58_RS24740 IPR035962 Rop-like superfamily DOE58_RS24745 IPR008687 Bacterial mobilisation